BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036704
(634 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/688 (53%), Positives = 454/688 (65%), Gaps = 111/688 (16%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
+ +SLCKQ L+NEA+ AF+FLQ T F + STYA LISACS LRSL+ G+K+HDH+L
Sbjct: 32 EYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLK 91
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
SK PD L NHILNMYGKC SL+DA+ VFD MP+RNVVSWT++IAG SQNGQ A+E
Sbjct: 92 SKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEF 151
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------------- 215
Y QMLQSG+MPDQFTFGSII+ACS L +GLGRQLHAHV+KSE G+H
Sbjct: 152 YFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTK 211
Query: 216 ------------------LISQNALIAMYTKFDRILDAW--------------------N 237
LIS ++IA +++ L+A +
Sbjct: 212 SNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGS 271
Query: 238 VFSSIAR--------------------KDITSWGSMIDGFSK---LDFARTVFNEMESPN 274
VFS+ + +D+ + S+ D ++K L AR VF ++ P+
Sbjct: 272 VFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPD 331
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
L +WN IIAG A +A EA++ FS+M + LIPD +TVRSLLCACTSP LYQGMQ+H
Sbjct: 332 LVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHG 391
Query: 335 YIIKKGFYSNVPVCNAIL-------------------------------------QHQAG 357
YI K G +VPVCN +L QA
Sbjct: 392 YINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAE 451
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E+FRL LM SQ +PD+IT +V+GA A S+E+G Q+HCY +KTGL D V NGL+
Sbjct: 452 EVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLI 511
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
D+Y KCGSL +A ++F+ M +PDVVSWSSLI+GYAQFG GEEALKLF+ MR V+PNHV
Sbjct: 512 DLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHV 571
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VGVLTACSHVGLVEEG +LY M+ E+GI PTRE SC+VDLLARAG ++EAE FI+Q
Sbjct: 572 TFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQ 631
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
MAFD DIVVWK+LLA+CKTHGNVDVGKRAAENILKIDP+NSAA VLLCNIYAS G WE+V
Sbjct: 632 MAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDV 691
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIH 625
ARL MK+RGVRKVPGQSWIE++ +IH
Sbjct: 692 ARLRSLMKQRGVRKVPGQSWIEVKDRIH 719
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/688 (50%), Positives = 448/688 (65%), Gaps = 111/688 (16%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
D +SLCK N Y EAL AFDF Q N++F+IR TY LI ACSS RSL GRK+HDHIL+
Sbjct: 36 DHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN 95
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
S C+ D +L+NHIL+MYGKCGSL DAR VFD MP+RN+VS+T++I G SQNGQ AI L
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------------- 215
Y++MLQ L+PDQF FGSII+AC+ VGLG+QLHA VIK E SH
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 216 ------------------LISQNALIAMYTKFDRILDA---------WNVF--------- 239
LIS +++IA +++ +A + VF
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 240 -----SSIARKDITSW-----------GSMIDGFSKLDF---------ARTVFNEMESPN 274
SS+ R D S G+ I G S D AR VF+++E P+
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
ASWN IIAG+A+ A+EA+S+FS+M IPD +++RSLLCA T P++L QGMQIHS
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 335 YIIKKGFYSNVPVCNAIL------------------------------------QH-QAG 357
YIIK GF +++ VCN++L QH Q
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E+ RLF LML S+ +PDHIT +++ C ++SL++G+Q+HCY +KTGLA + F+ NGL+
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
DMY KCGSLG AR +F+ M++ DVVSWS+LIVGYAQ G GEEAL LF+ M+S+G+ PNHV
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VGVLTACSHVGLVEEGL+LY MQ E+GI PT+E SCVVDLLARAGR++EAE FI++
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M + D+VVWK+LL++CKT GNV + ++AAENILKIDP NS A VLLC+++ASSG WE
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A L SMK+ V+K+PGQSWIEI+ KIH
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWIEIEDKIH 723
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/691 (50%), Positives = 450/691 (65%), Gaps = 117/691 (16%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
D +SLC+ + Y EAL AFDF Q N++F+IR TY LI ACSS RSL GRK+HDHIL+
Sbjct: 33 DHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN 92
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
S C+ D +L+NHIL+MYGKCGSL DAR VFD MP+RN+VS+T++I G SQNGQE AI L
Sbjct: 93 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITL 152
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------------- 215
Y++MLQ+ L+PDQF FGSII+AC+ V LG+QLHA VIK E SH
Sbjct: 153 YLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVR 212
Query: 216 ------------------LISQNALIAMYTKFDRILDA---------WNVF--------- 239
LIS +++IA +++ +A + VF
Sbjct: 213 FNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 272
Query: 240 -----SSIARKDITSWGSMIDGF-----------------------SKLDFARTVFNEME 271
SS+ R D +GS I G LD AR VFN++E
Sbjct: 273 SLKACSSLLRPD---YGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIE 329
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
P+ ASWN IIAG+A+ A+EA+S+FSEM + IPD +++RSLLCA T P++L QGMQ
Sbjct: 330 RPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQ 389
Query: 332 IHSYIIKKGFYSNVPVCNAIL------------------------------------QH- 354
IHS+IIK GF +++ VCN++L QH
Sbjct: 390 IHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHE 449
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
Q E+ RLF LML S+ +PDHIT +++ C ++SL++G+Q+HCY KTGL L+ F+ N
Sbjct: 450 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKN 509
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
GL+DMY KCGSL AR +F+ M++ DVVSWS+LIVGYAQ G GEEAL LFR M+SSG+ P
Sbjct: 510 GLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEP 569
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
NHVT VGVLTACSHVGLVEEGL+LY IMQ E+GI PT+E SCVVDLLARAG ++EAE F
Sbjct: 570 NHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERF 629
Query: 535 INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKW 594
I++M + D+VVWK+LL++CKT GNVD+ ++AAENILKIDP NS A VLLC+++ASSG W
Sbjct: 630 IDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNW 689
Query: 595 EEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
E+ A L SMK+ V+K+PGQSWI+++ KIH
Sbjct: 690 EDAALLRSSMKKHDVKKIPGQSWIDVEDKIH 720
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 183/433 (42%), Gaps = 41/433 (9%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTN 75
C D + C LD A V + R W+ + + L +EA+ F ++N +
Sbjct: 306 CSLCDMYARCGFLDSARRVFNQIERPDTASWNV-IIAGLANNGYADEAVSVFSEMRN-SG 363
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
F + L+ A + +L G ++H I+ D + N +L MY C L
Sbjct: 364 FIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCF 423
Query: 136 MVFDEMPQR-NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+F++ + + VSW A++ C Q+ Q + L+ ML S PD T G+++R C +
Sbjct: 424 NLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 483
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ LG Q+H + K+ +N LI MY K + A +F S+ D+ SW ++I
Sbjct: 484 SSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLI 543
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
G+++ F EA+ LF EM + P+ +T
Sbjct: 544 VGYAQSGFGE----------------------------EALILFREMKSSGIEPNHVTFV 575
Query: 315 SLLCACTSPLSLYQGMQIHSYI-IKKGFYSNVPVCNAI--LQHQAGELFRLFSLMLASQT 371
+L AC+ + +G+++++ + + G C+ + L +AG L + +
Sbjct: 576 GVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKL 635
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG---LMDMYVKCGSLGS 428
+PD + + ++ AC ++++ + I+K +D F L M+ G+
Sbjct: 636 EPDVVVWKTLLSACKTQGNVDLAQKAAENILK----IDPFNSTAHVLLCSMHASSGNWED 691
Query: 429 ARELFNFMEDPDV 441
A L + M+ DV
Sbjct: 692 AALLRSSMKKHDV 704
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 336/683 (49%), Positives = 428/683 (62%), Gaps = 111/683 (16%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
+CKQ Y EAL F+F N++ ++ STY +LI AC+S+RSL+ G+K+HDHIL S CQP
Sbjct: 131 MCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQP 190
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D VL NHILNMYGKCGSL+DAR FD M RNVVSWT MI+G SQNGQEN AI +Y+QML
Sbjct: 191 DLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQML 250
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------------------ 215
QSG PD TFGSII+AC + LGRQLH HVIKS + H
Sbjct: 251 QSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIV 310
Query: 216 -------------LISQNALIAMYTKFDRILDAWNVFSSIAR------------------ 244
LIS ++I +T+ ++A +F + R
Sbjct: 311 HASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSAC 370
Query: 245 ----------------------KDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWN 279
+++ + S+ D ++K F A F ++ESP+L SWN
Sbjct: 371 RSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWN 430
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
IIA + + NEA+ F +M L+PDG+T SLLCAC SP+++ QG QIHSYIIK
Sbjct: 431 AIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKI 490
Query: 340 GFYSNVPVCNAIL------------------------------------QH-QAGELFRL 362
G VCN++L QH QAGE+FRL
Sbjct: 491 GLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRL 550
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F LML S+ KPD+IT ++G CA +ASLE+G Q+HC+ +K+GL +DV V N L+DMY K
Sbjct: 551 FKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAK 610
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGSL AR++F ++PD+VSWSSLIVGYAQFG G EAL LFR M++ GV+PN VT +GV
Sbjct: 611 CGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGV 670
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSH+GLVEEG Y M+ E GI PTRE SC+VDLLARAG ++EAE+FI +M F+
Sbjct: 671 LSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNP 730
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
DI +WK+LLASCKTHGNVD+ +RAAENILK+DP+NSAALVLL NI+AS G W+EVARL
Sbjct: 731 DITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRN 790
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
MK+ GV+KVPGQSWI ++ +IH
Sbjct: 791 LMKQMGVQKVPGQSWIAVKDQIH 813
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 336/683 (49%), Positives = 431/683 (63%), Gaps = 112/683 (16%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
+CKQ Y EAL F+F N++ ++ PSTY +LI AC+++RSL+ G+++HDHIL S CQP
Sbjct: 54 MCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQP 113
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D VL NHILNMYGKCGSL+DAR FD M R+VVSWT MI+G SQNGQEN AI +Y+QML
Sbjct: 114 DLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQML 173
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------------------ 215
+SG PDQ TFGSII+AC + LG QLH HVIKS + H
Sbjct: 174 RSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIA 233
Query: 216 -------------LISQNALIAMYTKFDRILDAWNVFSSIARKDI--------------- 247
LIS ++I +T+ ++A +F + R+ +
Sbjct: 234 HASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSAC 293
Query: 248 -----TSWGSMIDG--------------------FSKLDF---ARTVFNEMESPNLASWN 279
+G I G ++K F A+ F ++ESP+L SWN
Sbjct: 294 RSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWN 353
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
IIA +A+ S+ NEA+ F +M L+PD +T +LLCAC SP++L QGMQIHSYIIK
Sbjct: 354 AIIAALAN-SDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKM 412
Query: 340 GFYSNVPVCNAIL------------------------------------QH-QAGELFRL 362
G VCN++L QH Q GE FRL
Sbjct: 413 GLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRL 472
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F LML S+ KPD+IT ++G CA + SLE+G Q+HC+ +K+GL +DV V N L+DMY K
Sbjct: 473 FKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAK 532
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG L AR +F+ ++PD+VSWSSLIVGYAQFG G+EAL LFR MR+ GV+PN VT +GV
Sbjct: 533 CGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGV 592
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSH+GLVEEG LY M+ E GI PTRE SC+VDLLARAG ++EAE+FI + FD
Sbjct: 593 LSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDP 652
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
DI +WK+LLASCKTHGNVD+ +RAAENILK+DP+NSAALVLL NI+AS+G W+EVARL
Sbjct: 653 DITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRN 712
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
MK+ GV+KVPGQSWIE++ +IH
Sbjct: 713 LMKQMGVQKVPGQSWIEVKDQIH 735
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 318/683 (46%), Positives = 412/683 (60%), Gaps = 111/683 (16%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
LCKQ+ Y EAL AFDF N+N PSTY L+ AC++ RSL +K+HDH+L S QP
Sbjct: 133 LCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQP 192
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+L NH++NMYGKCGS++DAR VFD M NVVSWT+MI+G SQNGQ N AI +Y+QM
Sbjct: 193 SIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMT 252
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS----------------------E 211
+SG PDQ TFGS+I+AC + LGRQLHAHVIKS E
Sbjct: 253 RSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIE 312
Query: 212 HGSH---------LISQNALIAMYTKFDRILDAWNVFSSIAR------------------ 244
H S+ LIS +I Y + ++A +F + R
Sbjct: 313 HASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSAC 372
Query: 245 ----------------------KDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWN 279
+++ + S+ D ++K F A+ F ++++P++ SWN
Sbjct: 373 SSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWN 432
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
IIA A +ANEA+ F +M L PD +T SLLC C SP+ L QG QIHSYI+K
Sbjct: 433 AIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKI 492
Query: 340 GFYSNVPVCNAIL-------------------------------------QHQAGELFRL 362
GF + VCN++L + Q GE FRL
Sbjct: 493 GFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRL 552
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
+ M S KPD IT ++G CA + SL +G Q+HCY +K+GL LDV V NGL+DMY K
Sbjct: 553 YKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAK 612
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGSL AR++F+ ++ D+VSWSSLIVGYAQ G G EAL LFR M + GV+PN VT +G
Sbjct: 613 CGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGA 672
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSH+GLVEEG +LY+ M+ E+GI PTRE SC+VDLLARAG +HEAE FI + D
Sbjct: 673 LSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDA 732
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
DI WK+LLA+CKTH NVD+ +R A NILK+DP+NSAA+V+LCNI+AS+G WEEVA+L
Sbjct: 733 DITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRK 792
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
MK+ GV+KVPGQSWIE++ K H
Sbjct: 793 LMKQMGVQKVPGQSWIEVKDKFH 815
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 320/640 (50%), Positives = 402/640 (62%), Gaps = 118/640 (18%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
+ ++LCKQ L+NEA+ AF+FLQ T F + STYA LISACS LRSL+ GRK+HDH+L
Sbjct: 32 EYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLK 91
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
SK PD L NHILNMYGKCGSL+DA+ VFD MP+RNVVSWT++IAG SQNGQ A+E
Sbjct: 92 SKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEF 151
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------------- 215
Y QMLQSG+MPDQFTFGSII+ACS L +GLGRQLHAHV+KSE G+H
Sbjct: 152 YFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTK 211
Query: 216 ------------------LISQNALIAMYTKFDRILDAW--------------------N 237
LIS ++IA +++ L+A +
Sbjct: 212 SNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGS 271
Query: 238 VFSSIAR--------------------KDITSWGSMIDGFSK---LDFARTVFNEMESPN 274
VFS+ + +D+ + S+ D ++K L AR VF ++ P+
Sbjct: 272 VFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPD 331
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
L +WN IIAG A +A EA++ FS+M + LIPD +TVRSLLCACTSP LYQGMQ+H
Sbjct: 332 LVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHG 391
Query: 335 YIIKKGFYSNVPVCNAIL-------------------------------------QHQAG 357
YI K G +VPVCN +L QA
Sbjct: 392 YINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAE 451
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E+F L LM SQ +PD+IT +V+GA A S+E+G Q+HCY +KTGL D+ V NGL+
Sbjct: 452 EVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLI 511
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
D+Y KCGSL +AR++F+ + +PDVVSWSSLI+GYAQFG GEEALKLF+ MR V+PNHV
Sbjct: 512 DLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHV 571
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VGVLTACSHVGLVEEG QLY M+ E+GI+PTRE SC+VDLLARAG ++EAE FI+Q
Sbjct: 572 TFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQ 631
Query: 538 MAFDDDIVVWKSLLASCKT-------HGNVDVGKRAAENI 570
MAFD DIVVWK+LLA+CK+ N+ V K+ E I
Sbjct: 632 MAFDPDIVVWKTLLAACKSVHQALARRTNLKVWKKQHEVI 671
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/491 (60%), Positives = 358/491 (72%), Gaps = 40/491 (8%)
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RNVVSWT++IAG SQNGQ A+E Y QMLQSG+MPDQFTFGSII+ACS L +GLG
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
RQLHAHV+KSE G+H+I+QNALI+MYTK + I+DA +VFS +A +D+ SWGSMI GFS+L
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 261 DF---ARTVFNEM---ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+ A F EM P+L +WN IIAG A +A+ F EM D ++
Sbjct: 121 GYELEALCYFKEMLHQGRPDLVAWNAIIAGFAY-GELRDAIFFFEEM---RCNADLVSWN 176
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
++L AC + QA E+FRL LM SQ +PD
Sbjct: 177 AILTAC------------------------------MRHDQAEEVFRLLKLMCISQHRPD 206
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+IT +V+GA A S+E+G Q+HCY +KTGL D V NGL+D+Y KCGSL +A ++F+
Sbjct: 207 YITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFD 266
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
M +PDVVSWSSLI+GYAQFG GEEALKLF+ MR V+PNHVT VGVLTACSHVGLVEE
Sbjct: 267 SMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEE 326
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G +LY M+ E+GI PTRE SC+VDLLARAG ++EAE FI+QMAFD DIVVWK+LLA+C
Sbjct: 327 GWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAAC 386
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
KTHGNVDVGKRAAENILKIDP+NSAA VLLCNIYAS G WE+VARL MK+RGVRKVPG
Sbjct: 387 KTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPG 446
Query: 615 QSWIEIQTKIH 625
QSWIE++ +IH
Sbjct: 447 QSWIEVKDRIH 457
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 162/369 (43%), Gaps = 54/369 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +I ACSSL + LGR++H H+L S+ + N +++MY K + DA VF M
Sbjct: 43 TFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRM 102
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R+++SW +MIAG SQ G E A+ + +ML G PD + +II + G R
Sbjct: 103 ATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQG-RPDLVAWNAIIAGFA----YGELR 157
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW-------------------NVFSSI 242
+ + L+S NA++ + D+ + + NV +
Sbjct: 158 DAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGAS 217
Query: 243 ARK--------------------DITSWGSMIDGFSK---LDFARTVFNEMESPNLASWN 279
A D + +ID ++K L A +F+ M +P++ SW+
Sbjct: 218 AETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWS 277
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
++I G A EA+ LF M ++ P+ +T +L AC+ + +G +++ + K+
Sbjct: 278 SLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKE 337
Query: 340 GFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ P C L +AG L + PD + + ++ AC ++++G
Sbjct: 338 --FGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVG 395
Query: 395 TQLHCYIMK 403
+ I+K
Sbjct: 396 KRAAENILK 404
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP T +++ A + S+++G +VH + L + D + N ++++Y KCGSL+ A
Sbjct: 204 RPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHK 263
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+FD M +VVSW+++I G +Q G A++L+ M + + P+ TF ++ ACS +
Sbjct: 264 IFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGL 323
Query: 197 VGLGRQLHAHVIK 209
V G +L+ + K
Sbjct: 324 VEEGWKLYGTMEK 336
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/582 (48%), Positives = 377/582 (64%), Gaps = 66/582 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +CS L +L R++H H+L S+ D + N +++MY K + DA VF +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLG 200
++++SW +MIAG SQ G E A+ + +ML QS P++F FGS ACS L G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
RQ+H IK GS L + +L MY K GF L
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKC--------------------------GF--L 352
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ ARTVF +E P+L +WN IIAG AS SNA E+ S FS+M L+P+ +TV SLLCAC
Sbjct: 353 ESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCAC 412
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
+ P+ L G+Q+HSYI+K GF ++PVCN++L
Sbjct: 413 SEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSW 472
Query: 353 ---------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q+QAGE+ RL LM AS+ KPDH+T +V+ + +AS E+G+Q+HC+IMK
Sbjct: 473 NTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMK 532
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+GL LD+ V N L++MY KCGSL AR++F+ + +PD++SWSSLIVGYAQ GCG+EA +L
Sbjct: 533 SGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFEL 592
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
FR MR GV+PN +T VG+LTACSH+G+VEEGL+LYR MQ +Y I PT+E SC+VDLLA
Sbjct: 593 FRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLA 652
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG + AEDFI QM F D+VVWK+LLA+CK HGN++VGKRAAEN+LKIDP+NSAA+V+
Sbjct: 653 RAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVM 712
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LCNI+ASSG W++ ARL SM+ V KVPGQSWIEI+ K+H
Sbjct: 713 LCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVH 754
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 226/587 (38%), Positives = 321/587 (54%), Gaps = 49/587 (8%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
D SLCK+NL+ EAL AFD Q ++ ++ TY LI+ACSSLRSL+ GRK+H H+L+
Sbjct: 67 DKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLT 126
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
QPD +L NHIL+MYGKCGSL++AR +FD MP +NVVSWT+MI+G S+ G+E+ AI L
Sbjct: 127 CNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITL 186
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
YVQML+SG +PD FTFGSI+++CSGL L RQLHAHV+KSE G+ LI+QNALI+MYTK
Sbjct: 187 YVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTK 246
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGV 285
F ++ DA NVFS I KD+ SWGSMI GFS+L + A F EM S ++ N + G
Sbjct: 247 FSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGS 306
Query: 286 A--SCSNANEAMSLFSEMGDRELIPD-GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
A +CS + L PD G + L L+ G + K GF
Sbjct: 307 AFSACS--------------KLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFL 352
Query: 343 SNVPVC------------NAILQ-----HQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+ NAI+ A E FS M + P+ +T ++ AC
Sbjct: 353 ESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCAC 412
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPDVVSW 444
+ L G Q+H YI+K G LD+ V N L+ MY KC +L A ++F + D+VSW
Sbjct: 413 SEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSW 472
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
++L+ Q E L+L + M +S ++P+HVTL VL + + E G Q++ +
Sbjct: 473 NTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMK 532
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
G+ + ++++ + G + A + + + DI+ W SL+ + GK
Sbjct: 533 S-GLNLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVG---YAQAGCGK 587
Query: 565 RAAENI-----LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
A E L + P N V + + G EE +L +M+E
Sbjct: 588 EAFELFRTMRGLGVKP-NEITFVGILTACSHIGMVEEGLKLYRTMQE 633
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/582 (48%), Positives = 377/582 (64%), Gaps = 66/582 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +CS L +L R++H H+L S+ D + N +++MY K + DA VF +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLG 200
++++SW +MIAG SQ G E A+ + +ML QS P++F FGS ACS L G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
RQ+H IK GS L + +L MY K GF L
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKC--------------------------GF--L 352
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ ARTVF +E P+L +WN IIAG AS SNA E+ S FS+M L+P+ +TV SLLCAC
Sbjct: 353 ESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCAC 412
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
+ P+ L G+Q+HSYI+K GF ++PVCN++L
Sbjct: 413 SEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSW 472
Query: 353 ---------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q+QAGE+ RL LM AS+ KPDH+T +V+ + +AS E+G+Q+HC+IMK
Sbjct: 473 NTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMK 532
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+GL LD+ V N L++MY KCGSL AR++F+ + +PD++SWSSLIVGYAQ GCG+EA +L
Sbjct: 533 SGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFEL 592
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
FR MR GV+PN +T VG+LTACSH+G+VEEGL+LYR MQ +Y I PT+E SC+VDLLA
Sbjct: 593 FRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLA 652
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG + AEDFI QM F D+VVWK+LLA+CK HGN++VGKRAAEN+LKIDP+NSAA+V+
Sbjct: 653 RAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVM 712
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LCNI+ASSG W++ ARL SM+ V KVPGQSWIEI+ K+H
Sbjct: 713 LCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVH 754
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 226/587 (38%), Positives = 321/587 (54%), Gaps = 49/587 (8%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
D SLCK+NL+ EAL AFD Q ++ ++ TY LI+ACSSLRSL+ GRK+H H+L+
Sbjct: 67 DKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLT 126
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
QPD +L NHIL+MYGKCGSL++AR +FD MP +NVVSWT+MI+G S+ G+E+ AI L
Sbjct: 127 CNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITL 186
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
YVQML+SG +PD FTFGSI+++CSGL L RQLHAHV+KSE G+ LI+QNALI+MYTK
Sbjct: 187 YVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTK 246
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGV 285
F ++ DA NVFS I KD+ SWGSMI GFS+L + A F EM S ++ N + G
Sbjct: 247 FSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGS 306
Query: 286 A--SCSNANEAMSLFSEMGDRELIPD-GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
A +CS + L PD G + L L+ G + K GF
Sbjct: 307 AFSACS--------------KLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFL 352
Query: 343 SNVPVC------------NAILQ-----HQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+ NAI+ A E FS M + P+ +T ++ AC
Sbjct: 353 ESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCAC 412
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPDVVSW 444
+ L G Q+H YI+K G LD+ V N L+ MY KC +L A ++F + D+VSW
Sbjct: 413 SEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSW 472
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
++L+ Q E L+L + M +S ++P+HVTL VL + + E G Q++ +
Sbjct: 473 NTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMK 532
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
G+ + ++++ + G + A + + + DI+ W SL+ + GK
Sbjct: 533 S-GLNLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVG---YAQAGCGK 587
Query: 565 RAAENI-----LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
A E L + P N V + + G EE +L +M+E
Sbjct: 588 EAFELFRTMRGLGVKP-NEITFVGILTACSHIGMVEEGLKLYRTMQE 633
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 299/665 (44%), Positives = 388/665 (58%), Gaps = 117/665 (17%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP-----DAVLHNHILNMYGKCGSL 131
R+ P+ YA L++ACS LRSL GR VH H+L+S + + +L NH++ MYG+CG+
Sbjct: 39 RLSPAAYAALVAACSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAP 98
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ AR+VFD M RN VSW A+IA +QN + A+ L+ ML+SG MPDQF GS I AC
Sbjct: 99 DSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICAC 158
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK----------FDRI--------- 232
S L +GLGRQ+HA IK E GS LI QNAL+ MY+K F+RI
Sbjct: 159 SELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWG 218
Query: 233 ------------LDAWNVFSSIARKDI---------------------TSWGSMIDGFS- 258
+DA +F + + + +G I G S
Sbjct: 219 SIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSV 278
Query: 259 ----------------------KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+LD AR VF +ESP+L SWN++I ++ +EAM
Sbjct: 279 KYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMV 338
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
LFSEM D L PDG+TV +LLCAC +L+QG IHSY++K G +V V N++L
Sbjct: 339 LFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYA 398
Query: 353 -------------------------------QHQAGE-LFRLFSLMLASQTKPDHITFND 380
QHQ E +F+LFSL+ S D I+ N+
Sbjct: 399 RCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNN 458
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDP 439
V+ A A + EM Q+H Y K GL D + NGL+D Y KCGSL A +LF M
Sbjct: 459 VLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGR 518
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
DV SWSSLIVGYAQFG +EAL LF RMR+ GV+PNHVT VGVLTACS VGLV+EG Y
Sbjct: 519 DVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYY 578
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
IM+ EYGI+PTRE SCV+DLLARAGR+ EA F++QM F+ DI++WK+LLA+ +TH +
Sbjct: 579 SIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHND 638
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
VD+GKRAAE +L IDP++SAA VLLCNIYASSG W E ARL M+ GV+K PG+SWI+
Sbjct: 639 VDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIK 698
Query: 620 IQTKI 624
++ ++
Sbjct: 699 LKGEL 703
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 174/391 (44%), Gaps = 46/391 (11%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLR-RFDDIWDFD-LFSSLCKQNLYNEALVAFDFLQNN 73
C D + C LD A +V F R D+ ++ L ++ + L +EA+V F ++++
Sbjct: 290 CSLSDMYARCNELDSARKV---FYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDS 346
Query: 74 TNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
+RP T L+ AC +L GR +H +++ D ++ N +L+MY +C
Sbjct: 347 G---LRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDF 403
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
A VF E R+VV+W +++ C Q+ +L+ + +S D+ + +++ A
Sbjct: 404 SSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSAS 463
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSW 250
+ L + +Q+HA+ K + N LI Y K + DA +F + +D+ SW
Sbjct: 464 AELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSW 523
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
S+I G+++ +A+ EA+ LF+ M + + P+
Sbjct: 524 SSLIVGYAQFGYAK----------------------------EALDLFARMRNLGVKPNH 555
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV---CNAILQ--HQAGELFRLFSL 365
+T +L AC+ + +G + Y I K Y VP C+ +L +AG L
Sbjct: 556 VTFVGVLTACSRVGLVDEG--CYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKF 613
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+ +PD I + ++ A ++MG +
Sbjct: 614 VDQMPFEPDIIMWKTLLAASRTHNDVDMGKR 644
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 287/660 (43%), Positives = 373/660 (56%), Gaps = 118/660 (17%)
Query: 83 YADLISACSSLRSLQLGRKVHDHIL-SSKCQPDA------VLHNHILNMYGKCGSLEDAR 135
YA L+SACS LRSL GR+VH H++ SS PDA VL NH++ MYG+C + + AR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFDEMP RN VSW ++IA QNG+ A+ L+ ML+SG DQF GS +RAC+ L
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
VG GRQ+HAH +KSE GS LI QNAL+ MY+K + D + +F I KD+ SWGS+I
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 256 GFSKLDF---ARTVFNEM-----ESPN-------------LASWN--TIIAGV------- 285
GF++ F A VF EM PN + SW I G+
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 286 -------------ASCSNANEAMSLFSEMGDRELIP----------DGLTVRSL------ 316
A C N + A F + +L+ +GL +L
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 317 ---------------LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------- 352
LCAC +LY G IHSY++K G +V VCN++L
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 353 --------------------------QH-QAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
QH E+ +LFSL+ S+ D I+ N+V+ A
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 466
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSW 444
A + EM Q+H Y K GL D + N L+D Y KCGSL A LF M + DV SW
Sbjct: 467 AELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSW 526
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
SSLIVGYAQFG +EA LF RMRS G+RPNHVT +GVLTACS VG V EG Y IM+
Sbjct: 527 SSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEP 586
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
EYGI+PTRE SC+VDLLARAG++ EA +FI+QM F+ DI++WK+LLA+ K H ++++GK
Sbjct: 587 EYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGK 646
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
RAAE IL IDP++SAA VLLCNIYA+SG W E ARL +M+ GV+K PG+SW++++ ++
Sbjct: 647 RAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGEL 706
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 194/474 (40%), Gaps = 82/474 (17%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFR 77
L + + G V D F+ F+ I D DL S +Q EAL F + +
Sbjct: 193 LVTMYSKNGLVDDGFML-FERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHH 251
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ AC ++ S + G ++H + + D + + +MY +C +L+ AR+
Sbjct: 252 PNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVA 311
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F + ++VSW +++ S G + A+ L+ +M SGL PD T ++ AC G +
Sbjct: 312 FYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDAL 371
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
GR +H++++K + N+L++MY + + A +VF I +D+
Sbjct: 372 YHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVV--------- 422
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+WN+I+ A ++ E + LFS + E D +++ ++L
Sbjct: 423 -------------------TWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVL 463
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------------- 354
A Q+H+Y K G + + N ++
Sbjct: 464 SASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDV 523
Query: 355 --------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
A E F LFS M + +P+H+TF V+ AC+ + + G CY
Sbjct: 524 FSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG----CY 579
Query: 401 ---IMKT--GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
IM+ G+ + ++D+ + G L A + M +PD++ W +L+
Sbjct: 580 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 633
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 172/389 (44%), Gaps = 42/389 (10%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTN 75
C D + C LD A V + D + + ++ + L +EALV F ++++
Sbjct: 293 CSLSDMYARCKNLDSA-RVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSG- 350
Query: 76 FRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
+RP T L+ AC +L GR +H +++ D + N +L+MY +C L
Sbjct: 351 --LRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSS 408
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A VF E+ ++VV+W +++ C+Q+ ++L+ + +S D+ + +++ A +
Sbjct: 409 AMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAE 468
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGS 252
L + +Q+HA+ K+ + N LI Y K + DA +F + +D+ SW S
Sbjct: 469 LGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSS 528
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+I G+++ +A+ EA LFS M + P+ +T
Sbjct: 529 LIVGYAQFGYAK----------------------------EAFDLFSRMRSLGIRPNHVT 560
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLML 367
+L AC+ + +G + Y I + Y VP C L +AG+L + +
Sbjct: 561 FIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 618
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+PD I + ++ A +EMG +
Sbjct: 619 QMPFEPDIIMWKTLLAASKMHNDMEMGKR 647
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/652 (41%), Positives = 367/652 (56%), Gaps = 117/652 (17%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQP-----DAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
CS LRS GR VH H+L+S + +L NH++ MYG+C + + ARMVFD M R
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N VSW A+IA +QN + A+ L+ ML+ G PD+F GS +RAC+ L +GLGRQ+H
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK----L 260
A IKS++G HLI QNAL+ MY+K + D + +F I KD+ SWGS+I G ++ +
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229
Query: 261 D----FARTVFNEMESPNLASWNTI----------------IAGV--------------- 285
D F + M PN + ++ I G+
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCS 289
Query: 286 -----ASCSNANEAMSLFSEMGDRELI-------------------------------PD 309
A C+ + AM +F + +L+ PD
Sbjct: 290 LGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPD 349
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------- 352
G+TV +LLCAC +L QG IHSY++K G +V VCN+++
Sbjct: 350 GITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFH 409
Query: 353 ------------------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
QH+ E +F+LF L+ +S D I+ N+V+ A A + EM
Sbjct: 410 ETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEM 469
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYA 452
Q+H Y K GL D + N L+D Y KCGSL A +LF M DV SWSSLIVGYA
Sbjct: 470 AKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYA 529
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
QFG +EAL LF RMR+ GV+PNHVT VGVL ACS VGLV+EG Y IM+ EYGI+PT+
Sbjct: 530 QFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTK 589
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E SCV+DLLARAGR+ EA F++QM F+ DI++W +LLA+ +TH +V++GKRAAE +L
Sbjct: 590 EHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLN 649
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
IDP++SAA VLLCNIYASSG W E ARL M+ GV+K PG+SWI+++ ++
Sbjct: 650 IDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGEL 701
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 178/394 (45%), Gaps = 52/394 (13%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLR-RFDDI--WDFDLFSSLCKQNLYNEALVAFDFLQN 72
C D + C LD A +V F R D+ W+ L ++ L +EA+V F ++
Sbjct: 288 CSLGDMYARCNKLDSAMKV---FYRIESPDLVSWN-SLINAFSADGLLSEAMVLFSEMRY 343
Query: 73 NTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS 130
++ ++P T L+ AC +L+ GR +H +++ D ++ N +++MY +C
Sbjct: 344 SS---LKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLD 400
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP--DQFTFGSII 188
A VF E R+VV+W +++ C Q+ +L+ ++L S MP D+ + +++
Sbjct: 401 FPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLF-RLLHSS-MPSLDRISLNNVL 458
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDI 247
A + L + +Q+HA+ K S I NALI Y K + DA +F + +D+
Sbjct: 459 SASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDV 518
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
SW S+I G+++ +A+ EA+ LF+ M + +
Sbjct: 519 FSWSSLIVGYAQFGYAK----------------------------EALDLFARMRNLGVK 550
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRL 362
P+ +T +L AC+ + +G + Y I + Y VP C L +AG L
Sbjct: 551 PNHVTFVGVLIACSRVGLVDEG--CYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEA 608
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+ +PD I +N ++ A +EMG +
Sbjct: 609 AKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKR 642
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
Query: 351 ILQ-HQAGEL---FRLF-SLMLASQTKPDHITFNDVMGA---CAAMASLEMGTQLHCYIM 402
ILQ + +G L R F SL + + PD ++ C+ + S G +H +++
Sbjct: 8 ILQFYHSGRLSAALRAFESLPFSPASAPDPLSAAAYAALVAACSRLRSFPQGRLVHRHLL 67
Query: 403 KTG-----LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
+ LA + + N L+ MY +C + SAR +F+ M D + VSW+++I +AQ
Sbjct: 68 ASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRC 127
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY--RIMQNEYGIIPTRERR 515
+A+ LF M G P+ L + AC+ +G + G Q++ I + G + +
Sbjct: 128 ADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIV---Q 184
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +V + +++G V + ++ D D+ W S++A G
Sbjct: 185 NALVTMYSKSGSVGDGFALFERIR-DKDLFSWGSIIAGLAQQG 226
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/660 (42%), Positives = 361/660 (54%), Gaps = 135/660 (20%)
Query: 83 YADLISACSSLRSLQLGRKVHDHIL-SSKCQPDA------VLHNHILNMYGKCGSLEDAR 135
YA L+SACS LRSL GR+VH H++ SS PDA VL NH++ MYG
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
RN VSW ++IA QNG+ A+ L+ ML+SG DQF GS +RAC+ L
Sbjct: 98 --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
VG GRQ+HAH +KSE GS LI QNAL+ MY+K + D + +F I KD+ SWGS+I
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209
Query: 256 GFSKLDF---ARTVFNEM-----ESPN-------------LASWN--TIIAGV------- 285
GF++ F A VF EM PN + SW I G+
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269
Query: 286 -------------ASCSNANEAMSLFSEMGDRELIP----------DGLTVRSL------ 316
A C N + A F + +L+ +GL +L
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329
Query: 317 ---------------LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------- 352
LCAC +LY G IHSY++K G +V VCN++L
Sbjct: 330 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 389
Query: 353 --------------------------QH-QAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
QH E+ +LFSL+ S+ D I+ N+V+ A
Sbjct: 390 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 449
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSW 444
A + EM Q+H Y K GL D + N L+D Y KCGSL A LF M + DV SW
Sbjct: 450 AELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSW 509
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
SSLIVGYAQFG +EA LF RMRS G+RPNHVT +GVLTACS VG V EG Y IM+
Sbjct: 510 SSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEP 569
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
EYGI+PTRE SC+VDLLARAG++ EA +FI+QM F+ DI++WK+LLA+ K H ++++GK
Sbjct: 570 EYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGK 629
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
RAAE IL IDP++SAA VLLCNIYA+SG W E ARL +M+ GV+K PG+SW++++ ++
Sbjct: 630 RAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGEL 689
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 194/474 (40%), Gaps = 82/474 (17%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFR 77
L + + G V D F+ F+ I D DL S +Q EAL F + +
Sbjct: 176 LVTMYSKNGLVDDGFML-FERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHH 234
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ AC ++ S + G ++H + + D + + +MY +C +L+ AR+
Sbjct: 235 PNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVA 294
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F + ++VSW +++ S G + A+ L+ +M SGL PD T ++ AC G +
Sbjct: 295 FYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDAL 354
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
GR +H++++K + N+L++MY + + A +VF I +D+
Sbjct: 355 YHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVV--------- 405
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+WN+I+ A ++ E + LFS + E D +++ ++L
Sbjct: 406 -------------------TWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVL 446
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------------- 354
A Q+H+Y K G + + N ++
Sbjct: 447 SASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDV 506
Query: 355 --------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
A E F LFS M + +P+H+TF V+ AC+ + + G CY
Sbjct: 507 FSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG----CY 562
Query: 401 ---IMKT--GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
IM+ G+ + ++D+ + G L A + M +PD++ W +L+
Sbjct: 563 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 616
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 172/389 (44%), Gaps = 42/389 (10%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTN 75
C D + C LD A V + D + + ++ + L +EALV F ++++
Sbjct: 276 CSLSDMYARCKNLDSA-RVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSG- 333
Query: 76 FRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
+RP T L+ AC +L GR +H +++ D + N +L+MY +C L
Sbjct: 334 --LRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSS 391
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A VF E+ ++VV+W +++ C+Q+ ++L+ + +S D+ + +++ A +
Sbjct: 392 AMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAE 451
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGS 252
L + +Q+HA+ K+ + N LI Y K + DA +F + +D+ SW S
Sbjct: 452 LGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSS 511
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+I G+++ +A+ EA LFS M + P+ +T
Sbjct: 512 LIVGYAQFGYAK----------------------------EAFDLFSRMRSLGIRPNHVT 543
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLML 367
+L AC+ + +G + Y I + Y VP C L +AG+L + +
Sbjct: 544 FIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 601
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+PD I + ++ A +EMG +
Sbjct: 602 QMPFEPDIIMWKTLLAASKMHNDMEMGKR 630
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/591 (42%), Positives = 343/591 (58%), Gaps = 72/591 (12%)
Query: 78 IRPSTYAD------LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
+R T AD + AC+ L + GR+VH H L S+ D ++ N ++ MY K G +
Sbjct: 144 LRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLV 203
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIRA 190
+D M+F+ + ++++SW ++IAG +Q G E A++++ +M+ G P++F FGS RA
Sbjct: 204 DDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRA 263
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C + G Q+H IK L +L MY +F + A F I D+ SW
Sbjct: 264 CGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSW 323
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
S+++ +S + G+ S EA+ LFSEM D L PDG
Sbjct: 324 NSIVNAYS-----------------------VEGLLS-----EALVLFSEMRDSGLRPDG 355
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------ 352
+TVR LLCAC +LY G IHSY++K G +V VCN++L
Sbjct: 356 ITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHE 415
Query: 353 -----------------QH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
QH E+ +LFSL+ S+ D I+ N+V+ A A + EM
Sbjct: 416 IKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMV 475
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQ 453
Q+H Y K GL D + N L+D Y KCGSL A LF M + DV SWSSLIVGYAQ
Sbjct: 476 KQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQ 535
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
FG +EAL LF RMRS G+RPNHVT +GVLTACS VG V EG Y IM+ EYGI+PTRE
Sbjct: 536 FGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTRE 595
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
SC+VDLLARAG++ EA +FI+QM F+ DI++WK+LLA+ K H ++++GKRAAE IL I
Sbjct: 596 HCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNI 655
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
DP++SAA VLLCNIYA+SG W E ARL +M+ GV+K PG+SW++++ ++
Sbjct: 656 DPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGEL 706
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 265/503 (52%), Gaps = 39/503 (7%)
Query: 83 YADLISACSSLRSLQLGRKVHDHIL-SSKCQPDA------VLHNHILNMYGKCGSLEDAR 135
YA L+SACS LRSL GR+VH H++ SS PDA VL NH++ MYG+C + + AR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFDEMP RN VSW ++IA QNG+ A+ L+ ML+SG DQF GS +RAC+ L
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
VG GRQ+HAH +KSE GS LI QNAL+ MY+K + D + +F I KD+ SWGS+I
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 256 GFSKLDF---ARTVFNEM-----ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
GF++ F A VF +M PN + + + + E G++
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSW--------EYGEQ--- 275
Query: 308 PDGLTVRSLL-------CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---- 356
GL+++ L C+ + + ++ + + ++ N+I+ +
Sbjct: 276 IHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGL 335
Query: 357 -GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
E LFS M S +PD IT ++ AC +L G +H Y++K GL DV V N
Sbjct: 336 LSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNS 395
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+ MY +C L SA ++F+ ++D DVV+W+S++ AQ EE LKLF + S +
Sbjct: 396 LLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLD 455
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
++L VL+A + +G E Q++ + G++ R + ++D A+ G + +A
Sbjct: 456 RISLNNVLSASAELGYFEMVKQVH-AYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF 514
Query: 536 NQMAFDDDIVVWKSLLASCKTHG 558
M + D+ W SL+ G
Sbjct: 515 EIMGNNRDVFSWSSLIVGYAQFG 537
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 192/429 (44%), Gaps = 71/429 (16%)
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+ +++ ACS L + GR++H H++ S S +A +A T L
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSS----PDAQLAGNTVLGNHL---------- 92
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
IT +G + D AR VF+EM + N SW ++IA A +A+ LFS M
Sbjct: 93 ---ITMYGRC----AAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLR 145
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------- 352
D + S + ACT + G Q+H++ +K S++ V NA++
Sbjct: 146 SGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDD 205
Query: 353 ----------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+ +A ++FR +++ P+ F A
Sbjct: 206 GFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFR--KMIVEGSHHPNEFHFGSAFRA 263
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
C A+ S E G Q+H +K L D++V L DMY + +L SAR F +E PD+VSW
Sbjct: 264 CGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSW 323
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+S++ Y+ G EAL LF MR SG+RP+ +T+ G+L AC + G ++ +
Sbjct: 324 NSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLV- 382
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+ G+ + ++ + AR + A D +++ D D+V W S+L +C H +
Sbjct: 383 KLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNH----- 436
Query: 565 RAAENILKI 573
E +LK+
Sbjct: 437 --PEEVLKL 443
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 159/348 (45%), Gaps = 41/348 (11%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
+ L +EALV F ++++ +RP T L+ AC +L GR +H +++ D
Sbjct: 333 EGLLSEALVLFSEMRDSG---LRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGD 389
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ N +L+MY +C L A VF E+ ++VV+W +++ C+Q+ ++L+ + +
Sbjct: 390 VSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNK 449
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
S D+ + +++ A + L + +Q+HA+ K+ + N LI Y K + D
Sbjct: 450 SEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDD 509
Query: 235 AWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
A +F + +D+ SW S+I G+++ +A+ E
Sbjct: 510 AMRLFEIMGNNRDVFSWSSLIVGYAQFGYAK----------------------------E 541
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----C 348
A+ LFS M + P+ +T +L AC+ + +G + Y I + Y VP C
Sbjct: 542 ALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSC 599
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
L +AG+L + + +PD I + ++ A +EMG +
Sbjct: 600 IVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKR 647
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/576 (41%), Positives = 340/576 (59%), Gaps = 66/576 (11%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ AC+ L + +GR+VH + S+ D ++ N ++ MY K G + D ++F M +++
Sbjct: 149 VRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDP 208
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLGRQLHA 205
+SW ++IAG +Q G E A++++ +M+ G+ P++F FGS+ AC L + G Q+H+
Sbjct: 209 ISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHS 268
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+K + + +L MY + KL+ A+
Sbjct: 269 LSVKYRLDHNSYAGCSLSDMYARC----------------------------KKLESAKR 300
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
VF +++P+L SWN+II + +EAM L SEM L PDG+TVR LLCAC +
Sbjct: 301 VFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDA 360
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------------- 352
+ G +HSY++K G +V VCN++L
Sbjct: 361 IQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTA 420
Query: 353 --QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
QHQ E+ F+LF+L+ S D I+ N+V+ A A + EM Q+H K GL D
Sbjct: 421 CVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVND 480
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ NGL+D Y KCGSL A +LF M + DV SWSSLIVGYAQ G +AL LF RMR
Sbjct: 481 TMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMR 540
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+ GVRPNHVT VGVLTACS VGLV+EG Y IM+ E+G++PTRE SCV+DLLARAGR+
Sbjct: 541 NLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRL 600
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA F++QM F+ DIV+WK+LLA KTH +V++G+RAAE IL IDP++SAA VLLCNIY
Sbjct: 601 TEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIY 660
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
++SG W E ARL +M+ GV+K PG+SW++++ ++
Sbjct: 661 SASGDWNEFARLKKAMRSSGVKKSPGKSWVKLKGEL 696
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 251/495 (50%), Gaps = 41/495 (8%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPD------AVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
CS LR+L LG VH H+L+S PD VL+NH++ MYG+C + E AR+VFDEMP
Sbjct: 48 CSRLRALCLGCLVHRHLLAS---PDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPA 104
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+N VSW ++IA +QN + A+ L+ ML+SG PDQF GS +RAC+ L +G+GRQ+
Sbjct: 105 KNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQV 164
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF- 262
HA +KSE+GS LI QNAL+ MY+K + D + +F + KD SWGS+I GF++
Sbjct: 165 HAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCE 224
Query: 263 --ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A +F EM + + N G S+FS G + G + SL
Sbjct: 225 MEALQIFREMVAEGMHHPNEFHFG-----------SVFSACGVLGSLEYGEQIHSLSVKY 273
Query: 321 TSPLSLYQGMQIHSYI--------IKKGFYS-NVP-------VCNAI-LQHQAGELFRLF 363
+ Y G + K+ FY + P + NA ++ E L
Sbjct: 274 RLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLL 333
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
S M S +PD IT ++ AC +++ G +H Y++K GL DV V N L+ MY +C
Sbjct: 334 SEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARC 393
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
SA ++F+ D DVV+W+S++ Q E KLF ++ S + ++L VL
Sbjct: 394 MDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVL 453
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
+A + +G E Q++ + G++ + ++D A+ G + +A M + D
Sbjct: 454 SASAELGYFEMVKQVH-TCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSD 512
Query: 544 IVVWKSLLASCKTHG 558
+ W SL+ G
Sbjct: 513 VFSWSSLIVGYAQSG 527
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/605 (36%), Positives = 337/605 (55%), Gaps = 65/605 (10%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
K +N+AL + +Q T + +I AC S LQ GRKVH+ I++ + D
Sbjct: 97 KNGFWNKALRLYYQMQR-TGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDV 155
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++ + +MY KCGSLE+AR VFD MP+R+VVSW A+IAG SQNGQ A+ L+ +M +
Sbjct: 156 IVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVN 215
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ P+ T S++ C+ L + G+Q+H + I+S S ++ N L+ MY K + A
Sbjct: 216 GIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTA 275
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+F + +D+ ASWN II G + S +EA+
Sbjct: 276 HKLFERMPIRDV----------------------------ASWNAIIGGYSLNSQHHEAL 307
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--- 352
+ F+ M R + P+ +T+ S+L AC +L QG QIH Y I+ GF SN V NA++
Sbjct: 308 AFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMY 367
Query: 353 --------------------------------QH-QAGELFRLFSLMLASQTKPDHITFN 379
QH E LF M A KPD
Sbjct: 368 AKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIV 427
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V+ ACA +LE G Q+H Y +++G +V V GL+D+Y KCG++ +A++LF M +
Sbjct: 428 SVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ 487
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
DVVSW+++I+ Y G GE+AL LF +M+ +G + +H+ +LTACSH GLV++GLQ +
Sbjct: 488 DVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYF 547
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ M+++YG+ P E +C+VDLL RAG + EA I M+ + D VW +LL +C+ H N
Sbjct: 548 QCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCN 607
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+++G++AA+++ ++DP N+ VLL NIYA + +WE+VA+L MKE+GV+K PG S +
Sbjct: 608 IELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVA 667
Query: 620 IQTKI 624
+ +
Sbjct: 668 VHRDV 672
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/612 (37%), Positives = 348/612 (56%), Gaps = 42/612 (6%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHIL 107
L SLCKQ EAL LQ+ I P STY L+ C + +SL + +H H++
Sbjct: 35 LVKSLCKQGRLREAL---HILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMI 91
Query: 108 SSK--CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
++ CQ D L N ++++Y K GSL +AR VFDEMP +NVVSWTAMIA +++ A
Sbjct: 92 QTQFECQ-DISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEA 150
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ + +M G+ P+ FTF SI+ AC+ L +G + H ++K S++ N L+ M
Sbjct: 151 LGFFYEMQDVGIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGFESNVFVGNGLVDM 207
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTII 282
Y K I A +F + ++D+ SW +MI G+ + ++ A +F E+ ++ +WNT++
Sbjct: 208 YAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMM 267
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL--CACTSPLSLYQGMQIHSYI---- 336
AG A C + A+ LF +M ++ L+ + + + L+Q M + I
Sbjct: 268 AGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNA 327
Query: 337 IKKGFYSN------------VPVCNAI----------LQHQAGELFRLFSLMLASQTKPD 374
+ GF N +P CN + QA +LF M KP+
Sbjct: 328 VISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPN 387
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
TF V+ ACAA+A LE G + H ++++G DV V N L+ MY KCGS+ AR++F+
Sbjct: 388 TETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFD 447
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
M D S S++IVGYA GC +E+L+LF +M+ +G++P+ VT VGVL+AC H GLV+E
Sbjct: 448 RMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDE 507
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G Q + IM Y I P E C++DLL RAG EA D IN+M D +W SLL++C
Sbjct: 508 GRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSAC 567
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+TH N+D+G++ A++++ ++P N A VLL NIYA++G+W+++ + MK+R V+K G
Sbjct: 568 RTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLG 627
Query: 615 QSWIEIQTKIHA 626
SWI I+ ++HA
Sbjct: 628 CSWIVIKKQVHA 639
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/625 (36%), Positives = 338/625 (54%), Gaps = 69/625 (11%)
Query: 39 LRRFDDIWDFDLFSSLCKQNLYNEALVAFD--FLQNNTNFRIRPSTYADLISACSSLRSL 96
R+ D + + S LCKQ EAL + LQ R+ + L+ C+ LRSL
Sbjct: 56 FRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGT---RVYSDVFRGLLQECARLRSL 112
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
+ GR+VH IL S QP+ L N +L+MY KCGSL DAR VFD + RN+VSWTAMI
Sbjct: 113 EQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAF 172
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
Q A + Y M +G PD+ TF S++ A + + +G+++H + K+
Sbjct: 173 VAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEP 232
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+L+ MY K DI+ A+ +F+++ N+
Sbjct: 233 RVGTSLVGMYAKCG---------------DISK-------------AQVIFDKLPEKNVV 264
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
+W +IAG A + A+ L +M E+ P+ +T S+L CT+PL+L G ++H YI
Sbjct: 265 TWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYI 324
Query: 337 IKKGFYSNVPVCNAILQ--------HQAGELF---------------------------- 360
I+ G+ + V NA++ +A +LF
Sbjct: 325 IQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAI 384
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
LF M KPD +TF + +C++ A L+ G +H ++ G +LDV++ + L+ MY
Sbjct: 385 DLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMY 444
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCGS+ AR +FN M + +VV+W+++I G AQ G EAL+ F +M+ G++P+ VT
Sbjct: 445 AKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFT 504
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
VL+AC+HVGLVEEG + +R M +YGI P E SC VDLL RAG + EAE+ I M F
Sbjct: 505 SVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPF 564
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARL 600
VW +LL++C+ H +V+ G+RAAEN+LK+DP + A V L NIYA++G++E+ ++
Sbjct: 565 QPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKV 624
Query: 601 MGSMKERGVRKVPGQSWIEIQTKIH 625
M++R V K PGQSWIE+ K+H
Sbjct: 625 RQVMEKRDVVKEPGQSWIEVDGKVH 649
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 216/468 (46%), Gaps = 72/468 (15%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLY---NEALVAFDFLQNNTNFRIRP 80
L + + G + D+ R FD I D ++ S + N+ L A+ + +P
Sbjct: 137 LLSMYAKCGSLTDA-RRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKP 195
Query: 81 S--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T+ L++A ++ LQ+G+KVH I + + + + ++ MY KCG + A+++F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D++P++NVV+WT +IAG +Q GQ + A+EL +M Q+ + P++ T+ SI++ C+ +
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALE 315
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+++H ++I+S +G + NALI MY K + +A +F + +D+ +W +M+ G++
Sbjct: 316 HGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYA 375
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+L F +EA+ LF M + + PD +T S L
Sbjct: 376 QLGF----------------------------HDEAIDLFRRMQQQGIKPDKMTFTSALT 407
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------- 352
+C+SP L +G IH ++ G+ +V + +A++
Sbjct: 408 SCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVA 467
Query: 353 ---------QH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYI 401
QH + E F M KPD +TF V+ AC + +E G +
Sbjct: 468 WTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMY 527
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G+ V + +D+ + G L A + M P W +L+
Sbjct: 528 LDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALL 575
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 333/593 (56%), Gaps = 46/593 (7%)
Query: 80 PST--YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T Y +LI+ L L+ R V DHI QP+ N +L+ Y K G L+D + V
Sbjct: 38 PETFLYNNLINTYGKLGDLKNARNVFDHI----PQPNLFSWNTLLSAYSKLGYLQDMQRV 93
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCC 196
FD MP +VVSW ++++G + NG + ++ +Y ML+ G + ++ TF +++ S
Sbjct: 94 FDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGF 153
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V LGRQ+H + K + S+L + L+ MY K I DA +F I K+I + +MI G
Sbjct: 154 VDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITG 213
Query: 257 FSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ F A +F+ M + SW TII G+ EA+ F EMG D T
Sbjct: 214 LLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTF 273
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------QH 354
S+L AC L+L +G QIH+YII+ + N+ V +A+L +H
Sbjct: 274 GSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRH 333
Query: 355 Q-----------------AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+ + E R+F M ++ PD T V+ +CA +ASLE G Q
Sbjct: 334 KNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQF 393
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H + +GL V V N L+ +Y KCGSL A +LF+ M+ D VSW++L+ GYAQFG
Sbjct: 394 HGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKA 453
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E + LF M + G+ P+ VT VGVL+ACS GLVE+G + M E+ I P + +C
Sbjct: 454 NETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTC 513
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++DLL+RAGR+ EA++FINQM F D + W +LL+SC+ +GN+++GK AAE++ K++P N
Sbjct: 514 MIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQN 573
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
A+ +LL +IYA+ GKW++VA+L M+E GV+K PG SWI+ + K+H D
Sbjct: 574 PASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSAD 626
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 207/484 (42%), Gaps = 103/484 (21%)
Query: 40 RRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
R FD + + D L S L +E++ ++ + + + + T++ ++ S+
Sbjct: 92 RVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNR 151
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV------ 147
+ LGR++H I Q + + +++MY K G + DA +F+E+P++N+V
Sbjct: 152 GFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMI 211
Query: 148 -------------------------SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
SWT +I G +QNG A++ + +M G DQF
Sbjct: 212 TGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQF 271
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TFGS++ AC G + G+Q+HA++I++++ ++ +AL+ MY K + A VF +
Sbjct: 272 TFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKM 331
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
K++ SW +M+ G+ + ++ EA+ +F +M
Sbjct: 332 RHKNVISWTAMLVGYGQNGYSE----------------------------EAVRIFCDMQ 363
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI---------LQ 353
E+ PD T+ S++ +C + SL +G Q H + G V V NA+ L+
Sbjct: 364 RNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLE 423
Query: 354 H---------------------------QAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
H +A E LF MLA PD +TF V+ AC+
Sbjct: 424 HAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACS 483
Query: 387 AMASLEMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSW 444
+E G C + + + ++D+ + G L A+ N M PD + W
Sbjct: 484 RAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGW 543
Query: 445 SSLI 448
++L+
Sbjct: 544 ATLL 547
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 176/373 (47%), Gaps = 33/373 (8%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C + +A ++ D+ + D I + + L + L+ EA+ F + F + T+
Sbjct: 217 CRFIVEAEQLFDNMPEK-DSISWTTIITGLTQNGLFKEAVDKFKEM-GIEGFCMDQFTFG 274
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC +L G+++H +I+ + Q + + + +L+MY KC +++ A VF +M +
Sbjct: 275 SVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHK 334
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NV+SWTAM+ G QNG A+ ++ M ++ + PD FT GS+I +C+ L + G Q H
Sbjct: 335 NVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFH 394
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ S + NALI +Y K + A +F + +D SW +++ G+++
Sbjct: 395 GQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQF---- 450
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
ANE +SLF M ++PDG+T +L AC+
Sbjct: 451 ------------------------GKANETISLFETMLAHGIVPDGVTFVGVLSACSRAG 486
Query: 325 SLYQGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
+ +G ++K+ + +P C L +AG L + + PD I + +
Sbjct: 487 LVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATL 546
Query: 382 MGACAAMASLEMG 394
+ +C +LE+G
Sbjct: 547 LSSCRLNGNLEIG 559
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 166/374 (44%), Gaps = 46/374 (12%)
Query: 194 LCCVGLGR----QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
CC R +LH +I++ N LI Y K + +A NVF I + ++ S
Sbjct: 14 FCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFS 73
Query: 250 WGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRE 305
W +++ +SKL + + VF+ M + ++ SWN++++G A +E++ +++ M D
Sbjct: 74 WNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGS 133
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSL 365
+ + +T ++L ++ + G QIH I K G+ S + V + ++ A F
Sbjct: 134 VNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGF----- 188
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
ND I + ++ V N ++ ++C
Sbjct: 189 ------------INDAN-----------------RIFEEIPEKNIVVYNTMITGLLRCRF 219
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ A +LF+ M + D +SW+++I G Q G +EA+ F+ M G + T VLTA
Sbjct: 220 IVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTA 279
Query: 486 CSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
C ++EG Q++ I++ +Y S ++D+ + V AE +M ++
Sbjct: 280 CGGFLALDEGKQIHAYIIRTDYQ--DNIFVGSALLDMYCKCRNVKYAEAVFRKMR-HKNV 336
Query: 545 VVWKSLLASCKTHG 558
+ W ++L +G
Sbjct: 337 ISWTAMLVGYGQNG 350
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/640 (34%), Positives = 336/640 (52%), Gaps = 70/640 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C +++A + D F + W+ + S + L EA F +Q + P T
Sbjct: 92 CGSVNEARRLFDKFSNKSVVSWNV-MISGYAHRGLGQEAFNLFTLMQQEG---LEPDKFT 147
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ ++SACSS +L GR+VH ++ + +A + N +++MY KCGS+ DAR VFD M
Sbjct: 148 FVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA 207
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R+ VSWT + +++G +++ Y MLQ G+ P + T+ +++ AC L + G+Q
Sbjct: 208 SRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQ 267
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+HA +++SEH S + AL MY K + DA VF + +D+ +
Sbjct: 268 IHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIA------------- 314
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
WNT+I G+ EA +F M + PD +T ++L AC
Sbjct: 315 ---------------WNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACAR 359
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------------- 353
P L G +IH+ +K G S+V NA++
Sbjct: 360 PGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTAL 419
Query: 354 -------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
Q E F F ML + + IT+ V+ AC+ +L+ G ++H ++K G+
Sbjct: 420 VGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGI 479
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D+ V N LM MY KCGS+ A + M DVV+W++LI G AQ G G EAL+ F
Sbjct: 480 FADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEV 539
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+S +RPN T V V++AC LVEEG + + M+ +YGI+PT + +C+VD+LARAG
Sbjct: 540 MKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAG 599
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EAED I M F +W +LLA+C+ HGNV++G++AAE LK++P N+ V L
Sbjct: 600 HLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSF 659
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
IYA++G W +VA+L MKERGV+K PG+SWIE+ ++H+
Sbjct: 660 IYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHS 699
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 248/512 (48%), Gaps = 66/512 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L+ +C + L +G++VH+HIL +P+ + N +L +Y CGS+ +AR +FD+
Sbjct: 47 YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFS 106
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
++VVSW MI+G + G A L+ M Q GL PD+FTF SI+ ACS + GR+
Sbjct: 107 NKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGRE 166
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H V+++ ++ NALI+MY K + DA VF ++A +D SW ++ +++ +
Sbjct: 167 VHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGY 226
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A+ E++ + M + P +T ++L AC S
Sbjct: 227 AQ----------------------------ESLKTYHAMLQEGVRPSRITYMNVLSACGS 258
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------------- 361
+L +G QIH+ I++ +S+V V A+ + A E+F
Sbjct: 259 LAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTM 318
Query: 362 ---------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+F ML PD +T+ ++ ACA L G ++H +K GL
Sbjct: 319 IGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGL 378
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV N L++MY K GS+ AR++F+ M DVVSW++L+ GYA G E+ F++
Sbjct: 379 VSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKK 438
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M GV N +T + VL ACS+ ++ G +++ + GI + ++ + + G
Sbjct: 439 MLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GIFADLAVANALMSMYFKCG 497
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
V +A M+ D+V W +L+ +G
Sbjct: 498 SVEDAIRVSEGMS-TRDVVTWNTLIGGLAQNG 528
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 195/424 (45%), Gaps = 68/424 (16%)
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
Q G D + + ++++C + +G+Q+H H+++ ++ N L+ +Y +
Sbjct: 37 QKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN 96
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+A +F + K + SW MI G++ + FN
Sbjct: 97 EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFN------------------------- 131
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
LF+ M L PD T S+L AC+SP +L G ++H +++ G +N V NA++
Sbjct: 132 ---LFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALIS 188
Query: 354 HQAG------------------------------------ELFRLFSLMLASQTKPDHIT 377
A E + + ML +P IT
Sbjct: 189 MYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRIT 248
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ +V+ AC ++A+LE G Q+H I+++ DV V L MY+KCG++ ARE+F +
Sbjct: 249 YMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ DV++W+++I G G EEA +F RM V P+ VT + +L+AC+ G + G +
Sbjct: 309 NRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKE 368
Query: 498 LY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
++ R +++ G++ + ++++ ++AG + +A ++M D+V W +L+
Sbjct: 369 IHARAVKD--GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGGYAD 425
Query: 557 HGNV 560
G V
Sbjct: 426 CGQV 429
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/643 (34%), Positives = 334/643 (51%), Gaps = 70/643 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C +++A ++ D F + W+ + S + L EA F +Q R+ P
Sbjct: 73 YAHCGSVNEARQLFDKFSNKSVVSWNV-MISGYAHRGLAQEAFNLFTLMQQE---RLEPD 128
Query: 82 --TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ ++SACSS L GR++H ++ + D + N +++MY KCGS+ DAR VFD
Sbjct: 129 KFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFD 188
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M R+ VSWT + +++G +++ Y MLQ + P + T+ +++ AC L +
Sbjct: 189 AMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEK 248
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+Q+HAH+++SE+ S + AL MY K DA VF ++ +D+ +W
Sbjct: 249 GKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAW--------- 299
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
NT+I G EA F M + + PD T ++L A
Sbjct: 300 -------------------NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSA 340
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------------- 353
C P L +G +IH+ K G S+V NA++
Sbjct: 341 CARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSW 400
Query: 354 ----------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q E F F ML K + IT+ V+ AC+ +L+ G ++H ++K
Sbjct: 401 TTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVK 460
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
GL D+ V N LM MY KCGS+ A +F M DVV+W++LI G Q G G EAL+
Sbjct: 461 AGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQR 520
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
+ M+S G+RPN T V VL+AC LVEEG + + M +YGI+PT + +C+VD+LA
Sbjct: 521 YEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILA 580
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG + EAED I + +W +LLA+C+ H NV++G+RAAE+ LK++P N+ V
Sbjct: 581 RAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVS 640
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L IYA++G W +VA+L MKERGV+K PG+SWIEI ++H+
Sbjct: 641 LSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHS 683
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 240/513 (46%), Gaps = 66/513 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L+ +C + L +G++VH+HIL +P+ + N +L +Y CGS+ +AR +FD+
Sbjct: 31 YVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFS 90
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
++VVSW MI+G + G A L+ M Q L PD+FTF SI+ ACS + GR+
Sbjct: 91 NKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGRE 150
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H V+++ + NALI+MY K + DA VF ++A +D
Sbjct: 151 IHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD---------------- 194
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
SW T+ A E++ + M + P +T ++L AC S
Sbjct: 195 ------------EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGS 242
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------------- 361
+L +G QIH++I++ ++S+V V A+ + A E+F
Sbjct: 243 LAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTM 302
Query: 362 ---------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
F ML PD T+ V+ ACA L G ++H K GL
Sbjct: 303 IRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGL 362
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV N L++MY K GS+ AR++F+ M DVVSW++L+ YA E+ F++
Sbjct: 363 VSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQ 422
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M GV+ N +T + VL ACS+ ++ G +++ + G++ + ++ + + G
Sbjct: 423 MLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCG 481
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
V +A M+ D+V W +L+ +G
Sbjct: 482 SVEDAIRVFEGMSM-RDVVTWNTLIGGLGQNGR 513
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 189/415 (45%), Gaps = 66/415 (15%)
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ G D + + ++++C + +G+Q+H H+++ ++ N L+ +Y +
Sbjct: 21 RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+A +F + K + SW MI G++ A+ FN
Sbjct: 81 EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFN------------------------- 115
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
LF+ M L PD T S+L AC+SP L G +IH +++ G ++ V NA++
Sbjct: 116 ---LFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALIS 172
Query: 354 HQAG------------------------------------ELFRLFSLMLASQTKPDHIT 377
A E + + ML + +P IT
Sbjct: 173 MYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRIT 232
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ +V+ AC ++A+LE G Q+H +I+++ DV V L MY+KCG+ ARE+F +
Sbjct: 233 YMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLS 292
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DV++W+++I G+ G EEA F RM GV P+ T VL+AC+ G + G +
Sbjct: 293 YRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKE 352
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
++ + G++ + ++++ ++AG + +A ++M D+V W +LL
Sbjct: 353 IHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLLG 405
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D + ++ +C L +G Q+H +I++ G+ +V++ N L+ +Y CGS+ AR+LF
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ + VVSW+ +I GYA G +EA LF M+ + P+ T V +L+ACS ++
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146
Query: 494 EGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G +++ R+M E G+ + ++ + A+ G V +A + MA D+ V W +L
Sbjct: 147 WGREIHVRVM--EAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDE-VSWTTLTG 203
Query: 553 SCKTHG 558
+ G
Sbjct: 204 AYAESG 209
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/584 (36%), Positives = 320/584 (54%), Gaps = 65/584 (11%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A +I + + L+ G+++H ++ + P L NH++NMY KCG L+ A +FD MPQ
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
RN+VSWTAMI+G SQN + + AI + M G +P QF F S IRAC+ L + +G+Q+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +K GS L + L MY+K G+M D A
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSK---------------------CGAMFD-------A 160
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VF EM + SW +I G + EA+ F +M D E+ D + S L AC +
Sbjct: 161 CKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGAL 220
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL---------------------- 359
+ G +HS ++K GF S++ V NA+ + +AG++
Sbjct: 221 KACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCL 280
Query: 360 -------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+F + +P+ TF+ ++ ACA A+LE GTQLH +MK
Sbjct: 281 IDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF 340
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D FV + L+DMY KCG L A + F+ + DP ++W+SL+ + Q G G++A+K+F R
Sbjct: 341 DEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFER 400
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M GV+PN +T + +LT CSH GLVEEGL + M YG++P E SCV+DLL RAG
Sbjct: 401 MVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAG 460
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EA++FIN+M F+ + W S L +C+ HG+ ++GK AAE ++K++P NS ALVLL N
Sbjct: 461 RLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSN 520
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
IYA+ +WE+V + M++ V+K+PG SW+++ K H G +
Sbjct: 521 IYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 564
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 208/471 (44%), Gaps = 79/471 (16%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRI--- 78
+ C LD A ++ D+ +R W + S L + + ++EA+ F RI
Sbjct: 50 YSKCGELDHALKLFDTMPQRNLVSWT-AMISGLSQNSKFSEAIRTF------CGMRICGE 102
Query: 79 RPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P+ +A I AC+SL S+++G+++H L + + +++ +MY KCG++ DA
Sbjct: 103 VPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 162
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+EMP ++ VSWTAMI G S+ G+ A+ + +M+ + DQ S + AC L
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
GR +H+ V+K S + NAL MY+K + A NVF ID
Sbjct: 223 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG-------------IDS 269
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
E N+ S+ +I G + +S+F E+ + + P+ T SL
Sbjct: 270 --------------ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------ 352
+ AC + +L QG Q+H+ ++K F + P ++IL
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDED-PFVSSILVDMYGKCGLLEQAIQAFDEIGDPT 374
Query: 353 ------------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
QH G + ++F M+ KP+ ITF ++ C+ +E G
Sbjct: 375 EIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 434
Query: 400 YIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ KT G+ + ++D+ + G L A+E N M +P+ W S +
Sbjct: 435 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/606 (35%), Positives = 334/606 (55%), Gaps = 72/606 (11%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
LD+A + S W+ + S + + + E+L F + +F + ++
Sbjct: 96 FLDEAARLFGSMPEPDQCSWN-SMVSGFAQHDRFEESLEYF-VKMHREDFLLNEYSFGSA 153
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+SAC+ L L +G +VH + S+ D + + +++MY KCGS+ A VF M +RN+
Sbjct: 154 LSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNL 213
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
V+W ++I QNG + A+E++V+M+ SGL PD+ T S++ AC+ LC + G Q+HA
Sbjct: 214 VTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHAR 273
Query: 207 VIKS-EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
V+K+ + L+ NAL+ MY K SK++ AR
Sbjct: 274 VVKTNKFRDDLVLGNALVDMYAKC----------------------------SKVNEARR 305
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
VF+ M N+ S ++++G A ++ A +FS+M R ++
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVS----------------- 348
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
N + + E RLF L+ P H TF +++ AC
Sbjct: 349 -----------------WNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSAC 391
Query: 386 AAMASLEMGTQLHCYIMKTGLAL------DVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
A +A L +G Q H +++K G D+FV N L+DMY+KCGS+ +F M++
Sbjct: 392 ANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER 451
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D VSW+++IVGYAQ G G EAL++FR+M G +P+HVT++GVL ACSH GLVEEG +
Sbjct: 452 DCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYF 511
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M+ E+G+IP ++ +C+VDLL RAG ++EA++ I M + D VVW SLLA+CK HGN
Sbjct: 512 FSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGN 570
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+++GK AAE +L+IDP NS VLL N+YA G+W +V R+ M+++GV K PG SWIE
Sbjct: 571 IEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIE 630
Query: 620 IQTKIH 625
+++++H
Sbjct: 631 VESRVH 636
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 264/571 (46%), Gaps = 109/571 (19%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S +A L+ +C RS + R VH IL ++ + + N ++++YGKC L+DAR +FD
Sbjct: 16 SPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDR 75
Query: 141 MPQRNVV-------------------------------SWTAMIAGCSQNGQENAAIELY 169
MPQRN SW +M++G +Q+ + ++E +
Sbjct: 76 MPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
V+M + + ++++FGS + AC+GL + +G Q+HA V KS + + + +ALI MY+K
Sbjct: 136 VKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC 195
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ A VFS + + NL +WN++I
Sbjct: 196 GSVACAEEVFSGMIER----------------------------NLVTWNSLITCYEQNG 227
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-FYSNVPVC 348
A+EA+ +F M D L PD +T+ S++ AC S +L +G+QIH+ ++K F ++ +
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
NA++ +++ S + ++ D ++ +V+ + ++
Sbjct: 288 NALV-----DMYAKCSKVNEARRVFDRMSIRNVVSETSMVSG------------------ 324
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
Y + S+ +AR +F+ M +VVSW++LI GY Q G EEAL+LFR ++
Sbjct: 325 -----------YARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLK 373
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERR----SCVVDLLA 523
+ P H T +L+AC+++ + G Q + +++ + E + ++D+
Sbjct: 374 RESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYM 433
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI-----DPTNS 578
+ G + + +M + D V W +++ +G G A + K+ P +
Sbjct: 434 KCGSIEDGSRVFEKMK-ERDCVSWNAIIVGYAQNG---YGAEALQIFRKMLVCGEKPDHV 489
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+ +LC + +G EE SM+E G+
Sbjct: 490 TMIGVLCAC-SHAGLVEEGRHYFFSMEEHGL 519
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 39/249 (15%)
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ F ++ +C S +H I+ T ++++F+ N L+D+Y KC L AR+L
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 433 FN-------------------------------FMEDPDVVSWSSLIVGYAQFGCGEEAL 461
F+ M +PD SW+S++ G+AQ EE+L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM-QNEYGIIPTRERRSCVVD 520
+ F +M N + L+AC+ + + G Q++ ++ ++ Y S ++D
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST--DVYMGSALID 190
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPT 576
+ ++ G V AE+ + M + ++V W SL+ + +G ++V R ++ L+ D
Sbjct: 191 MYSKCGSVACAEEVFSGM-IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEV 249
Query: 577 NSAALVLLC 585
A++V C
Sbjct: 250 TLASVVSAC 258
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/584 (36%), Positives = 319/584 (54%), Gaps = 65/584 (11%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A +I + + L+ G+++H ++ + P L NH++NMY KCG L+ A +FD MPQ
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
RN+VSWTAMI+G SQN + + AI + M G +P QF F S IRAC+ L + +G+Q+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +K GS L + L MY+K G+M D A
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSK---------------------CGAMFD-------A 160
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VF EM + SW +I G + EA+ F +M D E+ D + S L AC +
Sbjct: 161 CKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGAL 220
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL---------------------- 359
+ G +HS ++K GF S++ V NA+ + +AG++
Sbjct: 221 KACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCL 280
Query: 360 -------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+F + +P+ TF+ ++ ACA A+LE GTQLH +MK
Sbjct: 281 IDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF 340
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D FV + L+DMY KCG L A + F+ + DP ++W+SL+ + Q G G++A+K F R
Sbjct: 341 DEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFER 400
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M GV+PN +T + +LT CSH GLVEEGL + M YG++P E SCV+DLL RAG
Sbjct: 401 MVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAG 460
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EA++FIN+M F+ + W S L +C+ HG+ ++GK AAE ++K++P NS ALVLL N
Sbjct: 461 RLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSN 520
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
IYA+ +WE+V + M++ V+K+PG SW+++ K H G +
Sbjct: 521 IYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 564
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 207/471 (43%), Gaps = 79/471 (16%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRI--- 78
+ C LD A ++ D+ +R W + S L + + ++EA+ F RI
Sbjct: 50 YSKCGELDHALKLFDTMPQRNLVSWT-AMISGLSQNSKFSEAIRTF------CGMRICGE 102
Query: 79 RPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P+ +A I AC+SL S+++G+++H L + + +++ +MY KCG++ DA
Sbjct: 103 VPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 162
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+EMP ++ VSWTAMI G S+ G+ A+ + +M+ + DQ S + AC L
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
GR +H+ V+K S + NAL MY+K + A NVF ID
Sbjct: 223 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG-------------IDS 269
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
E N+ S+ +I G + +S+F E+ + + P+ T SL
Sbjct: 270 --------------ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------ 352
+ AC + +L QG Q+H+ ++K F + P ++IL
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDED-PFVSSILVDMYGKCGLLEHAIQAFDEIGDPT 374
Query: 353 ------------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
QH G + + F M+ KP+ ITF ++ C+ +E G
Sbjct: 375 EIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 434
Query: 400 YIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ KT G+ + ++D+ + G L A+E N M +P+ W S +
Sbjct: 435 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/659 (32%), Positives = 348/659 (52%), Gaps = 83/659 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + L AL+AF + + + T++ ++ ACS ++ L++G++VH ++ S
Sbjct: 128 LISGYAQNGLGGGALMAFHEM-HLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS 186
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + N ++ MY KC D++ +FDE+P+RNVVSW A+ + Q A+ L+
Sbjct: 187 GFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLF 246
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M+ SG+ P++F+ S++ AC+GL G+ +H ++IK + S NAL+ MY K
Sbjct: 247 YEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV 306
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDG--------------------------------- 256
+ DA +VF I + DI SW ++I G
Sbjct: 307 GDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESD 366
Query: 257 ----------FSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+SK D AR FN + +L +WN II+G + EA+SLF EM
Sbjct: 367 LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK 426
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------- 354
+ + T+ ++L + ++ Q+H +K GF+S++ V N+++
Sbjct: 427 EGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVED 486
Query: 355 ---------------------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAA 387
Q E +LF M + KPD + ++ ACA
Sbjct: 487 AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACAN 546
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+++ E G QLH +I+K G LD+F N L++MY KCGS+ A F+ + + +VSWS++
Sbjct: 547 LSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAM 606
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I G AQ G G +AL+LF +M GV PNH+TLV VL AC+H GLV E + M+ +G
Sbjct: 607 IGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFG 666
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
P +E +C++DLL RAG+++EA + +N+M F+ + VW +LL + + H +V++G+RAA
Sbjct: 667 FKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAA 726
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
E + ++P S VLL NIYAS+GKWE VA + M++ V+K PG SWIE++ K++
Sbjct: 727 EMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYT 785
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 276/587 (47%), Gaps = 79/587 (13%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L + NF +Y+ L+S C + +SL+ G ++H HI S D + NH++N+Y KC
Sbjct: 46 LIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCR 105
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
AR + DE + ++VSW+A+I+G +QNG A+ + +M G+ ++FTF S+++
Sbjct: 106 XFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
ACS + + +G+Q+H V+ S + N L+ MY K D LD+ +F I +++ S
Sbjct: 166 ACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVS 225
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
W ++ + + DF EA+ LF EM + P+
Sbjct: 226 WNALFSCYVQXDF----------------------------CGEAVGLFYEMVLSGIKPN 257
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLML 367
++ S++ ACT +G IH Y+IK G+ + NA++ A G+L S+
Sbjct: 258 EFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV-F 316
Query: 368 ASQTKPDHITFNDVMGACAAMASLE--------MGTQLHCYIMKTGLALDVFVMNGLMDM 419
+PD +++N V+ C E M QLH +MK + D+FV GL+DM
Sbjct: 317 EKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDM 376
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KC L AR FN + + D+++W+++I GY+Q+ EAL LF M G+ N TL
Sbjct: 377 YSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTL 436
Query: 480 VGVLTACSHVGLVEEGLQLYRI---------------MQNEYGI---IPTRER--RSCVV 519
+L + + + +V Q++ + + + YG + ER C +
Sbjct: 437 STILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI 496
Query: 520 -DLL---------ARAGRVHEAEDF---INQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
DL+ A+ G+ EA + M D V SLL +C + GK+
Sbjct: 497 GDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQL 556
Query: 567 AENILK----IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+ILK +D +LV N+YA G ++ R + ERG+
Sbjct: 557 HVHILKYGFVLDIFAGNSLV---NMYAKCGSIDDAGRAFSELTERGI 600
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 40/314 (12%)
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I V S + ++ + + P ++ LL C + SL G+QIH++I K G
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 341 FYSNVPVCNAILQ-HQAGELFRLFSLMLASQTKPD------------------------- 374
+ + N ++ + F ++ ++PD
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 375 ----------HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
TF+ V+ AC+ + L +G Q+H ++ +G DVFV N L+ MY KC
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
++ LF+ + + +VVSW++L Y Q EA+ LF M SG++PN +L ++
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVN 266
Query: 485 ACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
AC+ + G ++ +++ Y P + +VD+ A+ G + +A ++ D
Sbjct: 267 ACTGLRDSSRGKIIHGYLIKLGYDWDPFSA--NALVDMYAKVGDLADAISVFEKIK-QPD 323
Query: 544 IVVWKSLLASCKTH 557
IV W +++A C H
Sbjct: 324 IVSWNAVIAGCVLH 337
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/644 (34%), Positives = 346/644 (53%), Gaps = 71/644 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C + A +V D+ R W + + L + + +A F ++ ++P
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWT-SMITGLARHGRFKQACNLFQRMEEEG---VQPDKVA 314
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ L+ AC+ +L+ G+KVH + + + IL+MY KCGS+EDA VFD +
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
RNVVSWTAMIAG +Q+G+ + A + +M++SG+ P++ TF SI+ ACS + G+Q
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+ H+I++ +GS + AL++MY K + DA VF I+++
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQ----------------- 477
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
N+ +WN +I + A++ F + + P+ T S+L C S
Sbjct: 478 -----------NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------ 352
SL G +H I+K G S++ V NA++
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTI 586
Query: 353 -----QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
QH ++ F F +M S KPD ITF ++ ACA+ +L G +LH I +
Sbjct: 587 IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAF 646
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV V GL+ MY KCGS+ A ++F+ + +V SW+S+I GYAQ G G+EAL+LF +
Sbjct: 647 DCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQ 706
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ GV+P+ +T VG L+AC+H GL+EEGL ++ M+ E+ I P E C+VDL RAG
Sbjct: 707 MQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAG 765
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
++EA +FI +M + D VW +LL +C+ H NV++ ++AA+ L++DP ++ V+L N
Sbjct: 766 LLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
IYA++G W+EVA++ M +RGV K PGQSWIE+ K+H +D
Sbjct: 826 IYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSD 869
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/588 (27%), Positives = 279/588 (47%), Gaps = 75/588 (12%)
Query: 42 FDDIWDFD----LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQ 97
F DI D + + L K +NEA+ + + ++++ +I TY+ L+ C ++L
Sbjct: 69 FADIKDTQKANAVLNRLSKAGQFNEAMQVLERV-DSSHIQIYRQTYSALLQLCIKFKNLG 127
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCS 157
G ++++HI S QPD + N ++NMY KCG+ A+ +FD+M +++V SW ++ G
Sbjct: 128 DGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLI 217
Q+G A +L+ QM+Q + PD+ TF S++ AC+ V GR+L+ ++K+ + L
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS 277
ALI M+ K I DA VF ++ +D+ +W SM
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM------------------------ 283
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
I G+A +A +LF M + + PD + SLL AC P +L QG ++H+ +
Sbjct: 284 ----ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK 339
Query: 338 KKGFYSNVPVCNAIL-----------------------------------QH-QAGELFR 361
+ G+ + + V AIL QH + E F
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F+ M+ S +P+ +TF ++GAC++ ++L+ G Q+ +I++ G D V L+ MY
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCGSL A +F + +VV+W+++I Y Q + AL F+ + G++PN T
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+L C +E G ++ ++ + G+ + +V + G + A++ N M
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIM-KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-K 577
Query: 542 DDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLC 585
D+V W +++A HG D K E+ +K D L+ C
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNAC 625
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 223/489 (45%), Gaps = 78/489 (15%)
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
A++ S+ GQ N A+++ ++ S + + T+ ++++ C +G G +++ H+ KS
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
+ +N LI MY K + A +F + KD+
Sbjct: 140 GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVY---------------------- 177
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
SWN ++ G EA L +M + PD T S+L AC ++ +G
Sbjct: 178 ------SWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQ--------AGELF---------------------- 360
++++ I+K G+ +++ V A++ A ++F
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 361 ------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
LF M +PD + F ++ AC +LE G ++H + + G +++V
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
++ MY KCGS+ A E+F+ ++ +VVSW+++I G+AQ G +EA F +M SG+ P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRER-RSCVVDLLARAGRVHEAE 532
N VT + +L ACS ++ G Q+ I++ YG + +R R+ ++ + A+ G + +A
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG---SDDRVRTALLSMYAKCGSLKDAH 468
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYAS 590
+++ ++V W +++ + H D + +LK I P NS+ + N+ S
Sbjct: 469 RVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCKS 526
Query: 591 S-----GKW 594
S GKW
Sbjct: 527 SDSLELGKW 535
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/644 (34%), Positives = 346/644 (53%), Gaps = 71/644 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C + A +V D+ R W + + L + + +A F ++ ++P
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWT-SMITGLARHGRFKQACNLFQRMEEEG---VQPDKVA 314
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ L+ AC+ +L+ G+KVH + + + IL+MY KCGS+EDA VFD +
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
RNVVSWTAMIAG +Q+G+ + A + +M++SG+ P++ TF SI+ ACS + G+Q
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+ H+I++ +GS + AL++MY K + DA VF I+++
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQ----------------- 477
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
N+ +WN +I + A++ F + + P+ T S+L C S
Sbjct: 478 -----------NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------ 352
SL G +H I+K G S++ V NA++
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTI 586
Query: 353 -----QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
QH ++ F F +M S KPD ITF ++ ACA+ +L G +LH I +
Sbjct: 587 IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAF 646
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV V GL+ MY KCGS+ A ++F+ + +V SW+S+I GYAQ G G+EAL+LF +
Sbjct: 647 DCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQ 706
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ GV+P+ +T VG L+AC+H GL+EEGL ++ M+ E+ I P E C+VDL RAG
Sbjct: 707 MQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAG 765
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
++EA +FI +M + D VW +LL +C+ H NV++ ++AA+ L++DP ++ V+L N
Sbjct: 766 LLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
IYA++G W+EVA++ M +RGV K PGQSWIE+ K+H +D
Sbjct: 826 IYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSD 869
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 161/588 (27%), Positives = 279/588 (47%), Gaps = 75/588 (12%)
Query: 42 FDDIWDFD----LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQ 97
F DI D + + L K +NEA+ + + ++++ +I TY+ L+ C ++L
Sbjct: 69 FADIKDTQKANAVLNRLSKAGQFNEAMQVLERV-DSSHIQIYRQTYSALLQLCIKFKNLG 127
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCS 157
G ++++HI S QPD + N ++NMY KCG+ A+ +FD+M +++V SW ++ G
Sbjct: 128 DGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLI 217
Q+G A +L+ QM+Q + PD+ TF S++ AC+ V GR+L+ ++K+ + L
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS 277
ALI M+ K I DA VF ++ +D+ +W SM
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM------------------------ 283
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
I G+A +A +LF M + + PD + SLL AC P +L QG ++H+ +
Sbjct: 284 ----ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK 339
Query: 338 KKGFYSNVPVCNAIL-----------------------------------QH-QAGELFR 361
+ G+ + + V AIL QH + E F
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F+ M+ S +P+ +TF ++GAC++ ++L+ G Q+ +I++ G D V L+ MY
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCGSL A +F + +VV+W+++I Y Q + AL F+ + G++PN T
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+L C +E G ++ ++ + G+ + +V + G + A++ N M
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIM-KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-K 577
Query: 542 DDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLC 585
D+V W +++A HG D K E+ +K D L+ C
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNAC 625
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 222/489 (45%), Gaps = 78/489 (15%)
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
A++ S+ GQ N A+++ ++ S + + T+ ++++ C +G G +++ H+ KS
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
+ N LI MY K + A +F + KD+ S
Sbjct: 140 GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYS--------------------- 178
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
WN ++ G EA L +M + PD T S+L AC ++ +G
Sbjct: 179 -------WNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQ--------AGELF---------------------- 360
++++ I+K G+ +++ V A++ A ++F
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 361 ------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
LF M +PD + F ++ AC +LE G ++H + + G +++V
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
++ MY KCGS+ A E+F+ ++ +VVSW+++I G+AQ G +EA F +M SG+ P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRER-RSCVVDLLARAGRVHEAE 532
N VT + +L ACS ++ G Q+ I++ YG + +R R+ ++ + A+ G + +A
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG---SDDRVRTALLSMYAKCGSLKDAH 468
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYAS 590
+++ ++V W +++ + H D + +LK I P NS+ + N+ S
Sbjct: 469 RVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCKS 526
Query: 591 S-----GKW 594
S GKW
Sbjct: 527 SDSLELGKW 535
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/626 (35%), Positives = 335/626 (53%), Gaps = 70/626 (11%)
Query: 39 LRRFDDIWDFDLFSSLCKQNLYNEALVAFD--FLQNNTNFRIRPSTYADLISACSSLRSL 96
R+ + + + S LCK EAL + LQ R+ + L+ C+ LRSL
Sbjct: 7 FRKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGT---RVYSDVFRGLLQECARLRSL 63
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
+ GR+VH IL S QP+ L N +L+MY KCGSL DAR VFD + RN+VSWTAMI
Sbjct: 64 EQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAF 123
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
+ A + Y M +G PD+ TF S++ A + + LG+++H ++++
Sbjct: 124 VAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEP 183
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+L+ MY K DI+ AR +F+ + N+
Sbjct: 184 RVGTSLVGMYAKCG---------------DISK-------------ARVIFDRLPEKNVV 215
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
+W +IAG A + A+ L M E+ P+ +T S+L CT+P +L G ++H YI
Sbjct: 216 TWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYI 275
Query: 337 IKKGFYSNVPVCNAILQ--------HQAGELF---------------------------- 360
I+ G+ + V N+++ +A +LF
Sbjct: 276 IQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAI 335
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
LF M KPD +TF V+ +C++ A L+ G ++H ++ G LDV++ + L+ MY
Sbjct: 336 NLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMY 395
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGY-AQFGCGEEALKLFRRMRSSGVRPNHVTL 479
KCGS+ A +FN M + +VV+W+++I G AQ G EAL+ F +M+ G++P+ VT
Sbjct: 396 AKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTF 455
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
VL+AC+HVGLVEEG + +R M +YGI P E SC VDLL RAG + EAE+ I M
Sbjct: 456 TSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMP 515
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
F VW +LL++C+ H +V+ G+RAAEN+LK+DP + A V L +IYA++G++E+ +
Sbjct: 516 FIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEK 575
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
+ M++R V K PGQSWIE+ K+H
Sbjct: 576 VRQVMEKRDVVKEPGQSWIEVDGKVH 601
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 327/599 (54%), Gaps = 66/599 (11%)
Query: 65 VAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
+AF+ Q + P+ TY ++++A S +L+ G+ VH HIL++ + D + ++
Sbjct: 328 IAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALV 387
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
MY KCGS +D R VF+++ R++++W MI G ++ G A E+Y QM + G+MP++
Sbjct: 388 KMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKI 447
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T+ ++ AC + GR++H+ V+K + QNALI+MY + I DA
Sbjct: 448 TYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDA------- 500
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
R +FN+M ++ SW +I G+A EA+++F +M
Sbjct: 501 ---------------------RLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQ 539
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
L P+ +T S+L AC+SP +L G +IH +I+ G ++ V N ++
Sbjct: 540 QAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVK 599
Query: 354 --------------------------HQAG-ELFRLFSLMLASQTKPDHITFNDVMGACA 386
H G E +LF + KPD +T+ +++ ACA
Sbjct: 600 DARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 659
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
SLE ++H ++K G D + N L+ Y KCGS A +F+ M +V+SW++
Sbjct: 660 NSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNA 719
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I G AQ G G++ L+LF RM+ G++P+ VT V +L+ACSH GL+EEG + + M ++
Sbjct: 720 IIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDF 779
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
GI PT E C+VDLL RAG++ E E I M F + +W +LL +C+ HGNV V +RA
Sbjct: 780 GITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERA 839
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
AE+ LK+DP N+A V L ++YA++G W+ A+L M++RGV K PG+SWIE+ K+H
Sbjct: 840 AESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLH 898
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/564 (28%), Positives = 286/564 (50%), Gaps = 73/564 (12%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T L+S+C S +L+ GR++H + ++ D + N ILNMY KCGS+ +AR VFD+
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M ++VVSWT +I G + G A E++ +M Q G++P++ T+ +++ A SG + G
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+ +H+H++ + H S L AL+ MY K D VF + +D+ +W
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAW---------- 414
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
NT+I G+A N EA ++ +M ++P+ +T LL AC
Sbjct: 415 ------------------NTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNAC 456
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
+P +L+ G +IHS ++K GF ++ V NA++ A
Sbjct: 457 VNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWT 516
Query: 357 ------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E +F M + KP+ +T+ ++ AC++ A+L+ G ++H +++
Sbjct: 517 AMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA 576
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
GLA D V N L++MY CGS+ AR++F+ M D+V+++++I GYA G+EALKLF
Sbjct: 577 GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLF 636
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
R++ G++P+ VT + +L AC++ G +E +++ ++ + G + + +V A+
Sbjct: 637 DRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD-GYLSDTSLGNALVSTYAK 695
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAA 580
G +A ++M +++ W +++ C HG + + +R +K D +
Sbjct: 696 CGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVS 754
Query: 581 LVLLCNIYASSGKWEEVARLMGSM 604
L+ C + +G EE R SM
Sbjct: 755 LLSAC---SHAGLLEEGRRYFCSM 775
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/520 (22%), Positives = 222/520 (42%), Gaps = 100/520 (19%)
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
++ A+++ + Q G + + +++ C + + GR++H H+I+ + NA
Sbjct: 122 KDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA 181
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTI 281
LI MY + I +A V++ + + RTV SWN +
Sbjct: 182 LINMYIQCGSIEEARQVWNKLNHTE-----------------RTVH---------SWNAM 215
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
+ G EA+ L EM L T LL +C SP +L G +IH +K
Sbjct: 216 VVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARL 275
Query: 342 YSNVPVCNAILQ--------HQAGEL----------------------------FRLFSL 365
+V V N IL H+A E+ F +F
Sbjct: 276 LFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQK 335
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
M P+ IT+ +V+ A + A+L+ G +H +I+ G D+ V L+ MY KCGS
Sbjct: 336 MQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGS 395
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
R++F + + D+++W+++I G A+ G EEA +++ +M+ G+ PN +T V +L A
Sbjct: 396 YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNA 455
Query: 486 CSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
C + + G +++ R++++ G + ++ ++ + AR G + +A N+M D I
Sbjct: 456 CVNPTALHWGREIHSRVVKD--GFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDII 513
Query: 545 ----------------------------------VVWKSLLASCKTHGNVDVGKRAAENI 570
V + S+L +C + +D G+R + +
Sbjct: 514 SWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV 573
Query: 571 LKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
++ T++ L N+Y+ G ++ ++ M +R +
Sbjct: 574 IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI 613
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/598 (35%), Positives = 336/598 (56%), Gaps = 47/598 (7%)
Query: 80 PSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T+ +LIS+ + L S+ KV D + P+ N IL+ Y K G + + +
Sbjct: 42 PETFLLNNLISSYAKLGSIPYACKVFDQM----PHPNLYSWNTILSAYSKLGRVSEMEYL 97
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS--GLMPDQFTFGSIIRACSGLC 195
FD MP+R+ VSW ++I+G + G +++ Y ML++ ++ TF +++ S
Sbjct: 98 FDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRG 157
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
CV LGRQ+H HV+K S++ + L+ MY+K I A VF + K++ + ++I
Sbjct: 158 CVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIM 217
Query: 256 GF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
G +++ ++ +F EM + SW ++I G +A+ +F EM L D T
Sbjct: 218 GLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYT 277
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------ 354
S+L AC ++L +G Q+H+YII+ + N+ V +A++
Sbjct: 278 FGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMT 337
Query: 355 ---------------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
Q G E + FS M +PD T V+ +CA +ASLE G Q
Sbjct: 338 CKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQ 397
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
H + +GL + V N L+ +Y KCGS+ + LFN + D V+W++L+ GYAQFG
Sbjct: 398 FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGK 457
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
E + LF M + G++P+ VT +GVL+ACS GLVE+G Q++ M NE+GI+P ++ +
Sbjct: 458 ANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYT 517
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C++DL +RAGR+ EA +FIN+M F D + W +LL+SC+ +GN+D+GK AAE ++++DP
Sbjct: 518 CMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPH 577
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGNDISGN 634
N+A+ VLL ++YA+ GKWEEVARL M+++G+RK PG SWI+ + ++H D N
Sbjct: 578 NTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSN 635
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/639 (33%), Positives = 343/639 (53%), Gaps = 71/639 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C +D A +V ++ RR W + + L + + +A F ++ ++P
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWT-SMITGLARHRQFKQACNLFQVMEEEG---VQPDKVA 308
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ L+ AC+ +L+ G++VH + + + +L+MY KCGS+EDA VF+ +
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
RNVVSWTAMIAG +Q+G+ A + +M++SG+ P++ TF SI+ ACS + GRQ
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H +IK+ + + + AL++MY K ++DA NVF I+++
Sbjct: 429 IHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQ----------------- 471
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
N+ +WN +I + A++ F + + PD T S+L C S
Sbjct: 472 -----------NVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------ 352
P +L G + S II+ GF S++ + NA++
Sbjct: 521 PDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTI 580
Query: 353 -----QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
QH + F F +M S KPD ITF ++ ACA+ +L G +LH I + L
Sbjct: 581 IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAAL 640
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV V GL+ MY KCGS+ A +F+ + +V SW+S+I GYAQ G G+EAL+LF +
Sbjct: 641 DCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQ 700
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ GV+P+ +T VG L+AC+H GL++EGL + M+ ++ I P E C+VDL RAG
Sbjct: 701 MQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMK-DFNIEPRMEHYGCMVDLFGRAG 759
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+HEA +FIN+M D +W +LL +C+ H +V++ ++ A+ L++DP + V+L N
Sbjct: 760 LLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSN 819
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
IYA++G W+EV ++ M +RGV K PGQSWIE+ ++H
Sbjct: 820 IYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVH 858
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 168/616 (27%), Positives = 283/616 (45%), Gaps = 76/616 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ L K +EA++ ++ + +I TY+ L+ C ++L G ++H+HI S
Sbjct: 75 FLNRLSKAGQLSEAMLVL-LSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFS 133
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
K QPD + N +++MY KCG+ A+ +FDEMP ++V SW ++ G Q+ + A L+
Sbjct: 134 KIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLH 193
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
QM+Q G+ PD++TF ++ AC+ V G +L + ++ + + L ALI M+ K
Sbjct: 194 EQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKC 253
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ DA VF+++ R+D+ +W SM I G+A
Sbjct: 254 GGVDDALKVFNNLPRRDLITWTSM----------------------------ITGLARHR 285
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+A +LF M + + PD + SLL AC P +L QG ++H+ + + G + + V
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 350 AIL-----------------------------------QH-QAGELFRLFSLMLASQTKP 373
A+L QH + E F F+ M+ S +P
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+ +TF ++GAC+ ++L+ G Q+H I+K G D V L+ MY KCGSL AR +F
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVF 465
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ +VV+W+++I Y Q + A+ F+ + G++P+ T +L C +E
Sbjct: 466 ERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALE 525
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
G + ++ G R+ +V + G + A + N M + D+V W +++A
Sbjct: 526 LGKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAG 583
Query: 554 CKTHGN----VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
HG D K E+ +K D L+ C AS E RL + E +
Sbjct: 584 FVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNAC---ASPEALTEGRRLHALITEAAL 640
Query: 610 --RKVPGQSWIEIQTK 623
V G I + TK
Sbjct: 641 DCDVVVGTGLISMYTK 656
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 222/467 (47%), Gaps = 20/467 (4%)
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+N A + S+ GQ + A+ + + + + + T+ S+++ C +G G ++
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H H+ S+ + N LI+MY K A +F + KD+ SW ++ G+ +
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 264 RTVFNEME-------SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F E P+ ++ ++ A N ++ LFS + + D +L
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQTKPDH 375
+ + +++ + + ++ + + + +H Q + LF +M +PD
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+ F ++ AC +LE G ++H + + GL +++V L+ MY KCGS+ A E+FN
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
++ +VVSW+++I G+AQ G EEA F +M SG+ PN VT + +L ACS +++G
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426
Query: 496 LQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
Q++ RI++ Y I R+ ++ + A+ G + +A + +++ ++V W +++ +
Sbjct: 427 RQIHDRIIKAGY--ITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAY 483
Query: 555 KTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYASS-----GKW 594
H D + +LK I P +S+ + N+ S GKW
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKP-DSSTFTSILNVCKSPDALELGKW 529
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/643 (32%), Positives = 340/643 (52%), Gaps = 72/643 (11%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFS-SLCKQNLYNEALVAFDFLQNNTNFRIRP 80
+ C +++A EV D ++ W + + C + AF+ Q + P
Sbjct: 171 YAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADC-----GRSETAFEIFQKMEQEGVVP 225
Query: 81 S--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ TY +++A SS +L+ G+ VH IL++ + D + ++ MY KCGS +D R VF
Sbjct: 226 NRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVF 285
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+++ R++++W MI G ++ G A E+Y QM + G+MP++ T+ ++ AC +
Sbjct: 286 EKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALH 345
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+++H+ V K+ S + QNALI+MY++ I DA VF + RKD+
Sbjct: 346 WGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVI---------- 395
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
SW +I G+A EA++++ EM + P+ +T S+L
Sbjct: 396 ------------------SWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILN 437
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------- 353
AC+SP +L G +IH +++ G ++ V N ++
Sbjct: 438 ACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVA 497
Query: 354 ----------HQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
H G E +LF + KPD +T+ +++ ACA SLE ++H +
Sbjct: 498 YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVR 557
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K G D V N L+ Y KCGS A +F M +V+SW+++I G AQ G G++AL+
Sbjct: 558 KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQ 617
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF RM+ GV+P+ VT V +L+ACSH GL+EEG + + M ++ IIPT E C+VDLL
Sbjct: 618 LFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLL 677
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG++ EAE I M F + +W +LL +C+ HGNV V +RAAE+ LK+D N+ V
Sbjct: 678 GRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYV 737
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L ++YA++G W+ A+L M++RGV K PG+SWI++ K+H
Sbjct: 738 ALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLH 780
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 156/583 (26%), Positives = 286/583 (49%), Gaps = 75/583 (12%)
Query: 66 AFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A L+ + P +T +S+C S +L+ GR++H + + D + N ILN
Sbjct: 110 ALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILN 169
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY KCGS+E+AR VFD+M +++VVSWT I G + G+ A E++ +M Q G++P++ T
Sbjct: 170 MYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRIT 229
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+ S++ A S + G+ +H+ ++ + H S AL+ MY K D VF +
Sbjct: 230 YISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLV 289
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+D+ +W +MI G ++ + W EA ++++M
Sbjct: 290 NRDLIAWNTMIGGLAEGGY---------------W-------------EEASEVYNQMQR 321
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------- 356
++P+ +T LL AC + +L+ G +IHS + K GF S++ V NA++ +
Sbjct: 322 EGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKD 381
Query: 357 -----------------------------GELFRLFSLMLASQTKPDHITFNDVMGACAA 387
E ++ M + +P+ +T+ ++ AC++
Sbjct: 382 ARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSS 441
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
A+LE G ++H +++ GLA D V N L++MY CGS+ AR++F+ M D+V+++++
Sbjct: 442 PAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAM 501
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I GYA G+EALKLF R++ G++P+ VT + +L AC++ G +E +++ +++ G
Sbjct: 502 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG-G 560
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVG 563
+ +V A+ G +A +M +++ W +++ HG + +
Sbjct: 561 FFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHGRGQDALQLF 619
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
+R +K D +L+ C + +G EE R SM +
Sbjct: 620 ERMKMEGVKPDIVTFVSLLSAC---SHAGLLEEGRRYFCSMSQ 659
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 253/541 (46%), Gaps = 73/541 (13%)
Query: 66 AFDFLQ--NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D +Q ++ S Y ++ C ++ L GR+VH HI+ + PD N ++N
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 124 MYGKCGSLEDARMVFDEMP--QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
MY +CGS+E+AR V+ ++ +R V SW AM+ G Q G A++L QM Q GL PD+
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T S + +C + GR++H +++ + N ++ MY K I +A VF
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+ +K + SW I G A C + A +F +M
Sbjct: 187 MEKKSVVSW----------------------------TITIGGYADCGRSETAFEIFQKM 218
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---- 357
++P+ +T S+L A +SP +L G +HS I+ G S+ V A+++ A
Sbjct: 219 EQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSY 278
Query: 358 --------------------------------ELFRLFSLMLASQTKPDHITFNDVMGAC 385
E +++ M P+ IT+ ++ AC
Sbjct: 279 KDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNAC 338
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A+L G ++H + K G D+ V N L+ MY +CGS+ AR +F+ M DV+SW+
Sbjct: 339 VNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWT 398
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
++I G A+ G G EAL +++ M+ +GV PN VT +L ACS +E G ++++ + E
Sbjct: 399 AMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV-E 457
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
G+ + +V++ + G V +A ++M DIV + +++ H ++GK
Sbjct: 458 AGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLGKE 513
Query: 566 A 566
A
Sbjct: 514 A 514
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 191/434 (44%), Gaps = 64/434 (14%)
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
+++ A+++ + Q G + + +++ C + + GRQ+H H+I+ + N
Sbjct: 3 EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
ALI MY + I +A V+ ++ + RTV SWN
Sbjct: 63 ALINMYIQCGSIEEARQVWKKLSYME-----------------RTVH---------SWNA 96
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
++ G +A+ L +M L PD T+ S L +C SP +L G +IH ++ G
Sbjct: 97 MVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG 156
Query: 341 FYSNVPVCNAILQ--------HQAGEL----------------------------FRLFS 364
+V V N IL +A E+ F +F
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQ 216
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
M P+ IT+ V+ A ++ A+L+ G +H I+ G D V L+ MY KCG
Sbjct: 217 KMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCG 276
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
S R++F + + D+++W+++I G A+ G EEA +++ +M+ GV PN +T V +L
Sbjct: 277 SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLN 336
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
AC + + G +++ + G ++ ++ + +R G + +A ++M D+
Sbjct: 337 ACVNSAALHWGKEIHSRVAKA-GFTSDIGVQNALISMYSRCGSIKDARLVFDKM-VRKDV 394
Query: 545 VVWKSLLASCKTHG 558
+ W +++ G
Sbjct: 395 ISWTAMIGGLAKSG 408
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/588 (35%), Positives = 329/588 (55%), Gaps = 46/588 (7%)
Query: 80 PST--YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T Y +LI+A S L ++ R V D + QP++ N +L+ Y K G L + +
Sbjct: 38 PETFLYNNLINAYSKLGNITYARHVFDKM----PQPNSFSWNTMLSAYSKSGDLSTMQEI 93
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCC 196
F MP R+ VSW ++I+G G A++ Y M++ G++ ++ TF +++ S C
Sbjct: 94 FSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGC 153
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V LGRQ+H ++K G+++ ++L+ MY K + A VF + +++ + +MI G
Sbjct: 154 VDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITG 213
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ + ++ +F+ M+ + SW T+I G+ EAM LF +M + D T
Sbjct: 214 LLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTF 273
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------- 354
S+L AC +L +G +IH+ II+ G+ NV V +A++
Sbjct: 274 GSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMAN 333
Query: 355 --------------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
Q G E R+F M + +PD T V+ +CA +ASLE G Q
Sbjct: 334 KNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQF 393
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
HC + +GL + V N L+ +Y KCGS+ + +LF+ M D VSW++L+ GYAQFG
Sbjct: 394 HCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKA 453
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E + LF RM G++P+ VT + VL+ACS GLVE G Q + M ++GIIP + +C
Sbjct: 454 NETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTC 513
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++DL RAGR+ EA++FIN+M F D + W +LL+SC+ +GN ++GK AAE++L++DP N
Sbjct: 514 MIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQN 573
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A +LL +IYA+ GKW VA+L M+E+G RK PG SWI+ ++K++
Sbjct: 574 PAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVY 621
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 174/373 (46%), Gaps = 44/373 (11%)
Query: 194 LCC----VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
LCC ++LH +IKS N LI Y+K I A +VF + + + S
Sbjct: 14 LCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFS 73
Query: 250 WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF-SEMGDRE 305
W +M+ +SK L + +F+ M + + SWN++I+G + EA+ + S M D
Sbjct: 74 WNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGV 133
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSL 365
L + +T ++L +S + G QIH I+K GF + V V ++++ A ++ +
Sbjct: 134 LNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYA----KMGLV 189
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
+ASQ F++V M + M TGL ++ G
Sbjct: 190 SVASQ------VFDEVQERNVVMYN----------TMITGL--------------LRSGM 219
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ ++ LF+ M++ D +SW+++I G Q G EA+ LFR MR G+ + T VLTA
Sbjct: 220 VKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTA 279
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C + ++EG +++ ++ G S +VD+ + V AE +MA + ++V
Sbjct: 280 CGGLRALKEGKEIHTLIIRS-GYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMA-NKNVV 337
Query: 546 VWKSLLASCKTHG 558
W ++L +G
Sbjct: 338 SWTAMLVGYGQNG 350
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP----- 439
C + +LHC I+K+ + F+ N L++ Y K G++ AR +F+ M P
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 440 --------------------------DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV- 472
D VSW+SLI GY +G EA+K + M GV
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
N +T +L S G V+ G Q++ + ++G S +VD+ A+ G V A
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIV-KFGFGAYVFVGSSLVDMYAKMGLVSVAS 193
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
+++ + ++V++ +++ G V KR
Sbjct: 194 QVFDEVQ-ERNVVMYNTMITGLLRSGMVKDSKR 225
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/626 (34%), Positives = 330/626 (52%), Gaps = 85/626 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S +A L+ +C +S R++H I+ ++ + + N +++ YGKCG EDAR VFD
Sbjct: 20 SPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDR 79
Query: 141 MPQRNVVS-------------------------------WTAMIAGCSQNGQENAAIELY 169
MPQRN S W AM++G +Q+ + A+ +
Sbjct: 80 MPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFF 139
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
V M + ++++FGS + AC+GL + +G Q+HA + KS + + +AL+ MY+K
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC 199
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLD--------FARTVFNEMESPNL------ 275
+ A F +A ++I SW S+I + + F + N +E +
Sbjct: 200 GVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVV 259
Query: 276 ---ASWNTIIAGV--------------------------ASCSNANEAMSLFSEMGDREL 306
ASW+ I G+ A C NEA +F M R +
Sbjct: 260 SACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNV 319
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSL 365
+ + S++C S+ + S +++K S N + + E RLF L
Sbjct: 320 VSE----TSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLL 375
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL------DVFVMNGLMDM 419
+ P H TF +++ ACA +A L++G Q H I+K G D+FV N L+DM
Sbjct: 376 LKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDM 435
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y+KCG + +F M + DVVSW+++IVGYAQ G G AL++FR+M SG +P+HVT+
Sbjct: 436 YMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTM 495
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+GVL+ACSH GLVEEG + + M+ E G+ P ++ +C+VDLL RAG + EA D I M
Sbjct: 496 IGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMP 555
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
D VVW SLLA+CK HGN+++GK AE +++IDP NS VLL N+YA G+W++V R
Sbjct: 556 MQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVR 615
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
+ M++RGV K PG SWIEIQ+++H
Sbjct: 616 VRKQMRQRGVIKQPGCSWIEIQSRVH 641
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 224/469 (47%), Gaps = 50/469 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD+A V S W+ + S + + + EAL F + + +F + ++ +
Sbjct: 101 LDEAFNVFKSMPEPDQCSWN-AMVSGFAQHDRFEEALRFFVDMHSE-DFVLNEYSFGSAL 158
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ L L +G ++H I S+ D + + +++MY KCG + A+ FD M RN+V
Sbjct: 159 SACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIV 218
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW ++I QNG A+E++V M+ +G+ PD+ T S++ AC+ + G Q+HA V
Sbjct: 219 SWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARV 278
Query: 208 IKSE-HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFA 263
+K + + + L+ NAL+ MY K R+ +A VF + +++ S SM+ G+++ + A
Sbjct: 279 VKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAA 338
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
R +F+ M N+ SWN +IAG EA+ LF + + P T +LL AC +
Sbjct: 339 RLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANL 398
Query: 324 LSLYQGMQIHSYIIKKGFY------SNVPVCNAIL------------------------- 352
L G Q H+ I+K GF+ S++ V N+++
Sbjct: 399 ADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVV 458
Query: 353 ----------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCY 400
Q+ G +F ML S KPDH+T V+ AC+ +E G + H
Sbjct: 459 SWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSM 518
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ GLA ++D+ + G L A +L M PD V W SL+
Sbjct: 519 RTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLL 567
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 35/255 (13%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D F ++ +C S ++H I+KT + ++F+ N L+D Y KCG AR++F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 434 N-------------------------------FMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ M +PD SW++++ G+AQ EEAL+
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
F M S N + L+AC+ + + G+Q++ ++ ++ S +VD+
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVY-MGSALVDMY 196
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
++ G V A+ + MA +IV W SL+ + +G GK ++ +D +
Sbjct: 197 SKCGVVACAQRAFDGMAV-RNIVSWNSLITCYEQNG--PAGKALEVFVMMMDNGVEPDEI 253
Query: 583 LLCNIYASSGKWEEV 597
L ++ ++ W +
Sbjct: 254 TLASVVSACASWSAI 268
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 342/655 (52%), Gaps = 109/655 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T+A ++ +CSSL G ++H + D V + +L+MY KC L+ + F
Sbjct: 175 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHS 234
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP++N VSW+A+IAGC QN +EL+ +M ++G+ Q TF S+ R+C+GL + LG
Sbjct: 235 MPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG 294
Query: 201 RQLHAHVIKSEHGSHLI-------------------------------SQNALIAMYTKF 229
QLH H +K++ G+ ++ S NA+I Y +
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354
Query: 230 DRILDAWNVF---------------------------------------SSIARKDITSW 250
D+ ++A +F S+ + +I
Sbjct: 355 DKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 414
Query: 251 GSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+++D + K L A VF EM S + SWN IIA N + +SLF M +
Sbjct: 415 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 474
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK--GFYSNVPVC----------------- 348
PD T S+L AC +L GM+IH+ IIK G S V +
Sbjct: 475 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKL 534
Query: 349 ------------NAI-----LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
NAI LQ Q+ E + FS ML PD+ T+ ++ CA + ++
Sbjct: 535 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTV 594
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E+G Q+H I+K L D ++ + L+DMY KCG++ + +F + D V+W++++ GY
Sbjct: 595 ELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGY 654
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
AQ G GEEALK+F M+ V+PNH T + VL AC H+GLVE+GL + M + YG+ P
Sbjct: 655 AQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQ 714
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E SCVVD++ R+G+V +A + I M F+ D V+W++LL+ CK HGNV+V ++AA +IL
Sbjct: 715 LEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSIL 774
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+++P +SAA VLL NIYA++G W EV +L M+ G++K PG SWIEI++++HA
Sbjct: 775 QLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHA 829
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 138/553 (24%), Positives = 259/553 (46%), Gaps = 55/553 (9%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ T++ + CS ++L G++ H ++ ++ +P + N ++ MY KC LE A VF
Sbjct: 41 KKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVF 100
Query: 139 DEMPQR-------------------------------NVVSWTAMIAGCSQNGQENAAIE 167
D MPQR +VVSW ++I+G NG I+
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
+++QM + G + D+ TF ++++CS L G G Q+H +K +++ +AL+ MY
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR---TVFNEMESPNLASWNTIIAG 284
K ++ + F S+ K+ SW ++I G + D R +F EM+ + + A
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
V A+ L S++ L D + + T+ L +Y M+ ++ + +++
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTD---FGTDVVIGTATLDMY--MKCNNLSDAQKLFNS 335
Query: 345 VP-----VCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+P NAI+ + E +F L+ S D ++ + ACA + G
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEG 395
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
Q+H MK+ ++ V N ++DMY KCG+L A +F M D VSW+++I + Q
Sbjct: 396 LQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQN 455
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRE 513
G E+ L LF M SG+ P+ T VL AC+ + G++++ RI+++ G+
Sbjct: 456 GNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGL--DSF 513
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK- 572
++D+ ++ G + +AE +++A + +V W ++++ + ++ +L+
Sbjct: 514 VGIALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 572
Query: 573 -IDPTNSAALVLL 584
+DP N +L
Sbjct: 573 GVDPDNFTYATIL 585
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
FS A+ TK TF+ + C+ +L G Q H ++ T VFV N L+ MY+K
Sbjct: 32 FSSYQATPTKKK--TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIK 89
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
C L A ++F+ M D VSW++++ GYA G A KLF M V + + G
Sbjct: 90 CSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGY 149
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV---DLLARAGRVHEAEDFINQMA 539
L H +++ LQ+ R+ G + R + V+ L G + +M
Sbjct: 150 LHNGDHRKVIDVFLQMGRM-----GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG 204
Query: 540 FDDDIVVWKSLL---ASCK 555
FD D+V +LL A CK
Sbjct: 205 FDCDVVTGSALLDMYAKCK 223
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/655 (33%), Positives = 337/655 (51%), Gaps = 109/655 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
++ A ++ AC +L +G +VH ++ D V + +L MY KC L+D+ VF E
Sbjct: 182 ASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSE 241
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P++N VSW+AMIAGC QN + +EL+ +M G+ Q + S+ R+C+ L + LG
Sbjct: 242 LPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLG 301
Query: 201 RQLHAHVIKSEHGSHLI-------------------------------SQNALIAMYTKF 229
++LH+H +KS GS +I S NA+I Y +
Sbjct: 302 KELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARS 361
Query: 230 DRILDAWNVF---------------------------------------SSIARKDITSW 250
DR A F SI+ +I
Sbjct: 362 DRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVA 421
Query: 251 GSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+++D + K L A +F+ ME + SWN IIA N E ++ F+ M +
Sbjct: 422 NAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRME 481
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG--FYSNVPVC----------------- 348
PD T S+L AC +L GM+IH+ IIK G F S V
Sbjct: 482 PDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKI 541
Query: 349 ------------NAI-----LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
NAI L Q+ + + FS ML PD+ T+ V+ CA +A++
Sbjct: 542 HDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATV 601
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+G Q+H I+K L DV++ + L+DMY KCG++ ++ +F + D V+W++++ GY
Sbjct: 602 GLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGY 661
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G GEEALKLF M+ V+PNH T V VL AC+H+GLV++GL + +M +EYG+ P
Sbjct: 662 AHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQ 721
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E SC+VD+L R+GR+ EA + + +M F+ D V+W++LL+ CK HGNV+V ++A +L
Sbjct: 722 SEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALL 781
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++DP +S+A VLL NIYA +G W V+ + M+ ++K PG SWIE++ ++HA
Sbjct: 782 QLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHA 836
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/527 (26%), Positives = 248/527 (47%), Gaps = 53/527 (10%)
Query: 71 QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP----------------- 113
QN T + T++ + CS SL G++ H ++ +P
Sbjct: 40 QNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLY 99
Query: 114 --------------DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
D V +N I++ Y CG ++ AR F EMP+R+VVSW ++I+G QN
Sbjct: 100 LDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQN 159
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G+ +I+++++M + G+ D+ + +++AC L +G Q+H V+K +++
Sbjct: 160 GECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTG 219
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLA 276
+AL+ MY K R+ D+ +VFS + K+ SW +MI G + D +F EM+ +
Sbjct: 220 SALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVG 279
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
+I A + A A+ L E+ L S + T+ L +Y +
Sbjct: 280 VSQSIYASLFRSCAALSALRLGKELHSHALKS---AFGSDIIVGTATLDMYA--KCGRMA 334
Query: 337 IKKGFYSNVPVC-----NAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
+ S++P C NAI+ + + + F L+L + D IT + + ACA
Sbjct: 335 DAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACA 394
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
++ G Q+H +K+ ++ V N ++DMY KC +L A +LF+ ME D VSW++
Sbjct: 395 SIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNA 454
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNE 505
+I Q G EE L F M S + P+ T VL AC+ + G++++ RI+++
Sbjct: 455 IIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSG 514
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G + +VD+ + G + +A D I+ +V W ++++
Sbjct: 515 MGF--DSFVGAALVDMYCKCGMIEKA-DKIHDRTEQKTMVSWNAIIS 558
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 363 FSLMLASQTKPDHI--TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
FS + +QT+P TF+ + C+ SL G Q H ++ G FV N LM MY
Sbjct: 35 FSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMY 94
Query: 421 VK-------------------------------CGSLGSARELFNFMEDPDVVSWSSLIV 449
+K CG + AR+ F M + DVVSW+S+I
Sbjct: 95 IKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVIS 154
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
G+ Q G +++ +F M GV + +L VL AC + + G+Q++ ++ ++G
Sbjct: 155 GFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVV-KFGFD 213
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
S ++ + A+ R+ ++ +++ + + V W +++A C
Sbjct: 214 CDVVTGSALLGMYAKCKRLDDSLSVFSELP-EKNWVSWSAMIAGC 257
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/634 (34%), Positives = 331/634 (52%), Gaps = 66/634 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D A V D + W + S +Q EAL+ F LQ + A +I
Sbjct: 100 VDNARVVFDKMPHKNLITWS-SMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVI 158
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
AC+ L ++ G ++H ++ S D + +++ Y K G++E+AR+VFD++ ++ V
Sbjct: 159 RACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAV 218
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+WT +IAG ++ G+ ++EL+ QM ++ ++PD++ S++ ACS L + G+Q+HA+V
Sbjct: 219 TWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 278
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
++ + N LI YTK +R+ R +F
Sbjct: 279 LRRGTEMDVSVVNVLIDFYTKCNRV----------------------------KAGRKLF 310
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
++M N+ SW T+I+G S EAM LF EM PDG S+L +C S +L
Sbjct: 311 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAIL----------------------------------- 352
QG Q+H+Y IK S+ V N ++
Sbjct: 371 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 430
Query: 353 -QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q + E LF M KP+ TF ++ A + +ASL G Q H ++K GL F
Sbjct: 431 SQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPF 490
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+DMY KCGS+ AR++FN DVV W+S+I +AQ G EEAL +FR M G
Sbjct: 491 VTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEG 550
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
++PN+VT V VL+ACSH G VE+GL + M +GI P E +CVV LL R+G++ EA
Sbjct: 551 IQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEA 609
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
++FI +M + +VW+SLL++C+ GNV++GK AAE + DP +S + +LL NI+AS
Sbjct: 610 KEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASK 669
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
G W +V ++ M V K PG+SWIE+ K++
Sbjct: 670 GMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVN 703
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 167/608 (27%), Positives = 284/608 (46%), Gaps = 77/608 (12%)
Query: 51 FSSLCKQNLYNEALVAFDFLQNNT-----NFRIRPSTYADLISACSSLRSLQLGRKVHDH 105
+ + KQ V+ FL N N R + +A+L+ S + + +H
Sbjct: 15 YRTTKKQAFNFSTSVSPQFLLQNPCLQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQ 74
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
I+ S Q D L N ++N+ K +++AR+VFD+MP +N+++W++M++ SQ G A
Sbjct: 75 IIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEA 134
Query: 166 IELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
+ ++V + +SG P++F S+IRAC+ L V G QLH V++S + +LI
Sbjct: 135 LMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLID 194
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
Y+K I +A VF ++ K +W TIIAG
Sbjct: 195 FYSKNGNIEEARLVFDQLSEKTAVTW----------------------------TTIIAG 226
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
C + ++ LF++M + ++PD V S+L AC+ L G QIH+Y++++G +
Sbjct: 227 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 286
Query: 345 VPVCNAILQH-------QAG-----------------------------ELFRLFSLMLA 368
V V N ++ +AG E +LF M
Sbjct: 287 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 346
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
KPD V+ +C + +LE G Q+H Y +K L D FV NGL+DMY K L
Sbjct: 347 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLID 406
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A+++F+ M + +V+S++++I GY+ EAL+LF MR +PN T ++TA S+
Sbjct: 407 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASN 466
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+ + G Q + + + G+ + +VD+ A+ G + EA N + D+V W
Sbjct: 467 LASLRHGQQFHNQLV-KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIW-RDVVCWN 524
Query: 549 SLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
S++++ HG + ++K I P N V + + + +G+ E+ SM
Sbjct: 525 SMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSHAGRVEDGLNHFNSMPG 583
Query: 607 RGVRKVPG 614
G++ PG
Sbjct: 584 FGIK--PG 589
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/594 (35%), Positives = 330/594 (55%), Gaps = 46/594 (7%)
Query: 79 RPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+P T+ +LI+A L +L V DHI QP+ N IL++Y K G L +
Sbjct: 37 QPETFLSNNLITAYYKLGNLAYAHHVFDHI----PQPNLFSWNTILSVYSKLGLLSQMQQ 92
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLC 195
+F+ MP R+ VSW I+G + G + A+ +Y ML+ M ++ TF +++ CS
Sbjct: 93 IFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFR 152
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
CV LGRQ++ ++K GS + + L+ MYTK I DA F + +++ +MI
Sbjct: 153 CVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMIT 212
Query: 256 GFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
G + ++ ++ +F ++ + SW +I G+ EA+ +F EM D T
Sbjct: 213 GLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFT 272
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------ 354
S+L AC S L+L +G QIH+Y+I+ NV V +A++
Sbjct: 273 FGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMP 332
Query: 355 ---------------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
Q G E ++F M + +PD T V+ +CA +ASLE G Q
Sbjct: 333 QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQ 392
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
HC + +GL + V N L+ +Y KCGS ++ LF M D VSW++L+ GYAQFG
Sbjct: 393 FHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGK 452
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
E + LF RM + G++P+ VT +GVL+ACS GLVE+GLQ + M E+GI+P + +
Sbjct: 453 ANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCT 512
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C++DLL RAGR+ EA +FIN M D+V W +LL+SC+ HG++++GK AA++++ ++P
Sbjct: 513 CIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQ 572
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
N A+ VLL ++YAS GKW++VA+L M+++ VRK PG SWI+ + K+H D
Sbjct: 573 NPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSAD 626
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 205/457 (44%), Gaps = 97/457 (21%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
++A+ + + + + T++ ++ CS R + LGR+++ IL D + +
Sbjct: 119 SDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSP 178
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVV-------------------------------SW 149
+++MY K G + DA+ FDEMP+RNVV SW
Sbjct: 179 LVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISW 238
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
T MI G QNG E A++++ +M +G DQFTFGS++ AC L +G G+Q+HA+VI+
Sbjct: 239 TIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIR 298
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
++H ++ +AL+ MY+K I A VF + +K++ SW +M+ G+ + F+
Sbjct: 299 TDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSE----- 353
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
EA+ +F EM + PD T+ S++ +C + SL +G
Sbjct: 354 -----------------------EAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEG 390
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQ------------------------------------ 353
Q H + G S + V NA++
Sbjct: 391 AQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQF 450
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFV 412
+A E LF MLA KPD +TF V+ AC+ +E G Q I + G+ V
Sbjct: 451 GKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDH 510
Query: 413 MNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++D+ + G L AR N M PDVV W++L+
Sbjct: 511 CTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLL 547
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 174/359 (48%), Gaps = 32/359 (8%)
Query: 39 LRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQL 98
L+ D I + + L + L EAL F ++ F + T+ +++AC SL +L
Sbjct: 230 LKERDSISWTIMITGLMQNGLEREALDMFREMRL-AGFAMDQFTFGSVLTACGSLLALGE 288
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G+++H +++ + + + + + +++MY KC S++ A VF MPQ+NV+SWTAM+ G Q
Sbjct: 289 GKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQ 348
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
NG A++++ +M ++G+ PD FT GS+I +C+ L + G Q H + S S +
Sbjct: 349 NGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITV 408
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
NALI +Y K ++ +F+ + +D S W
Sbjct: 409 SNALITLYGKCGSTENSHRLFTEMNIRDEVS----------------------------W 440
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
++AG A ANE + LF M L PDG+T +L AC+ + +G+Q +IK
Sbjct: 441 TALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIK 500
Query: 339 K-GFYSNVPVCNAI--LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ G V C I L +AG L + + PD + + ++ +C +E+G
Sbjct: 501 EHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIG 559
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/624 (33%), Positives = 342/624 (54%), Gaps = 72/624 (11%)
Query: 61 NEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
N AFD + T+ I P+ T+ ++ AC++ L+ GRK+H + + + D +
Sbjct: 136 NHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVA 195
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
++ MY KCG + A VF +M +RNVVSWTA+I +Q+ + N A ELY QMLQ+G+
Sbjct: 196 TALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGIS 255
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P+ TF S++ +C+ + GR++H+H+ + + +I NALI MY K + + +A +
Sbjct: 256 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREI 315
Query: 239 FSSIARKDITSWGSMIDGFSKLDFART-----VFNEMES-------PNLASWNTIIAG-- 284
F ++++D+ SW +MI G+++ + VF +E PN ++ +I+
Sbjct: 316 FDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACT 375
Query: 285 ---------------------------------VASCSNANEAMSLFSEMGDRELIPDGL 311
A C + EA +FS+M ++ ++
Sbjct: 376 AHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVV---- 431
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-------QAGELFRLFS 364
A TS LS+Y ++ + +S +P N + + Q G++ ++F
Sbjct: 432 -------AWTSFLSMY--IKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFE 482
Query: 365 L---MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
L M A +PD +T ++ AC A+A LE G +H +K GL D V L+ MY
Sbjct: 483 LLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYS 542
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG + AR +F+ M + D V+W++++ GY Q G G EA+ LF+RM V PN +TL
Sbjct: 543 KCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTA 602
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
V++ACS GLV+EG +++R+MQ ++ + P ++ C+VDLL RAGR+ EAE+FI M +
Sbjct: 603 VISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCE 662
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
DI VW +LL +CK+H NV + +RAA +IL+++P+ ++ + L NIYA +G+W++ ++
Sbjct: 663 PDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVR 722
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
M +RG++K G+S IEI +IH
Sbjct: 723 RVMDDRGLKKDRGESSIEIDGRIH 746
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/624 (25%), Positives = 270/624 (43%), Gaps = 107/624 (17%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
LCK EA+ ++ + +TY +I C+ R + G+ VH + +
Sbjct: 31 LCKAGRLREAIQLLGIIKQR-GLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEI 89
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D L N ++N Y K + A VF M R+VV+W++MIA + N A + + +M
Sbjct: 90 DIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT 149
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ + P++ TF SI++AC+ + GR++H V + + ALI MY+K I
Sbjct: 150 DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
A VF + +++ SW II A NE
Sbjct: 210 VACEVFHKMTERNVV----------------------------SWTAIIQANAQHRKLNE 241
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
A L+ +M + P+ +T SLL +C +P +L +G +IHS+I ++G +++ V NA++
Sbjct: 242 AFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALIT 301
Query: 354 ---------------------------------HQAG--------ELFRLFSLMLASQTK 372
Q+G E+F+L M
Sbjct: 302 MYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVF 361
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD----------------------- 409
P+ +TF ++ AC A +LE G Q+H + K G LD
Sbjct: 362 PNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQV 421
Query: 410 --------VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
V + MY+KCG L SA ++F+ M +VVSW+ +I GYAQ G +
Sbjct: 422 FSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVF 481
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+L M++ G +P+ VT++ +L AC + +E G +L + G+ + ++ +
Sbjct: 482 ELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVVATSLIGM 540
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTN 577
++ G+V EA ++M+ + D V W ++LA HG+ VD+ KR + + +
Sbjct: 541 YSKCGQVAEARTVFDKMS-NRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEIT 599
Query: 578 SAALVLLCNIYASSGKWEEVARLM 601
A++ C+ + E+ R+M
Sbjct: 600 LTAVISACSRAGLVQEGREIFRMM 623
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 118/235 (50%), Gaps = 5/235 (2%)
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T+ V+ CA E G +H + + G+ +D+++ N L++ Y K + SA ++F M
Sbjct: 58 TYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRM 117
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
DVV+WSS+I YA +A F RM + + PN +T + +L AC++ ++E+G
Sbjct: 118 TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGR 177
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+++ I++ G+ + ++ + ++ G + A + ++M + ++V W +++ +
Sbjct: 178 KIHTIVK-AMGMETDVAVATALITMYSKCGEISVACEVFHKMT-ERNVVSWTAIIQANAQ 235
Query: 557 HGNVDVGKRAAENILK--IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
H ++ E +L+ I P N+ V L N + R+ + ERG+
Sbjct: 236 HRKLNEAFELYEQMLQAGISP-NAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 289
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/580 (35%), Positives = 318/580 (54%), Gaps = 68/580 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + L+ CS ++L+ G +H +L + Q D + NH+LNMY KCG AR VFDEM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++N+VSW+AMI+G Q G+ AI+LY QM L+P+++ F S+I AC+ L V LG+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++H+ +K + S N+LI+MY K ++ DA +VF++
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPE----------------- 164
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
PN S+N +I G + F M + LIPD +L CT
Sbjct: 165 -----------PNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICT 213
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGELFRLF---------S 364
+ +L +G ++H +K S + N I L +A + FRL +
Sbjct: 214 TTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273
Query: 365 LMLA--------------------SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
L+ A + +PD TF + ACA +AS+ G Q+H ++M+T
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L D+ V N L++MY KCG +G A ++F+ M ++VSW+++I G+ G GE A++LF
Sbjct: 334 RLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELF 393
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M +SG+RP+ VT +G+LTAC+H GLV++G + M+ YGI P E SC++D+L R
Sbjct: 394 EQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGR 453
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AGR++EAE+++ + F +D VV SLL++ + HG+V +G+R A+ +LK+ P ++ VLL
Sbjct: 454 AGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLL 513
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
N+YAS G W+ VA +K G++K PG S IE+ +
Sbjct: 514 SNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSV 553
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+ + L F + TN R T+ ++AC+ L S+ G+++H H++ ++ D + N
Sbjct: 284 HAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGN 343
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++NMY KCG + A +F +M N+VSW +IAG +G A+EL+ QM SG+ P
Sbjct: 344 ALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRP 403
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
D TF ++ AC+ V G QL+ + ++ +G
Sbjct: 404 DSVTFIGLLTACNHAGLVDKG-QLYFNSMEETYG 436
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 318/580 (54%), Gaps = 68/580 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + L+ CS ++L+ G +H +L + Q D + NH+LNMY KCG AR VFDEM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++N+VSW+AMI+G Q G+ AI+LY QM L+P+++ F S+I AC+ L V LG+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++H+ +K + S N+LI+MY K ++ DA +VF++
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPE----------------- 164
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
PN S+N +I G + F M + LIPD +L CT
Sbjct: 165 -----------PNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICT 213
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRLF---------S 364
+ +L +G ++H +K S + N I+ +A + FRL +
Sbjct: 214 TTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273
Query: 365 LMLA--------------------SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
L+ A + +PD TF + ACA +AS+ G Q+H ++M+T
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L D+ V N L++MY KCG +G A ++F+ M ++VSW+++I G+ G GE A++LF
Sbjct: 334 RLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELF 393
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M +SG+RP+ VT +G+LTAC+H GLV++G + M+ YGI P E SC++D+L R
Sbjct: 394 EQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGR 453
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AGR++EAE+++ + F +D VV SLL++ + HG+V +G+R A+ +LK+ P ++ VLL
Sbjct: 454 AGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLL 513
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
N+YAS G W+ VA +K G++K PG S IE+ +
Sbjct: 514 SNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSV 553
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+ + L F + TN R T+ ++AC+ L S+ G+++H H++ ++ D + N
Sbjct: 284 HAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGN 343
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++NMY KCG + A +F +M N+VSW +IAG +G A+EL+ QM SG+ P
Sbjct: 344 ALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRP 403
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
D TF ++ AC+ V G QL+ + ++ +G
Sbjct: 404 DSVTFIGLLTACNHAGLVDKG-QLYFNSMEETYG 436
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 320/606 (52%), Gaps = 71/606 (11%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
LD+A + S R W+ + S + + EAL F + F + ++A +
Sbjct: 101 FLDEADSLFRSMPERDQCTWN-SMVSGFAQHDRCEEALCYFAMMHKE-GFVLNEYSFASV 158
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+SACS L + G +VH I S D + + +++MY KCG++ DA+ VFDEM RNV
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSW ++I QNG A++++ ML+S + PD+ T S+I AC+ L + +G+++H
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 207 VIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
V+K++ + +I NA + MY K RI +A R
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEA----------------------------RF 310
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+F+ M N+ + ++I+G A ++ A +F++M +R ++
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS----------------- 353
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
N + + E LF L+ P H +F +++ AC
Sbjct: 354 -----------------WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 386 AAMASLEMGTQLHCYIMKTGLAL------DVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
A +A L +G Q H +++K G D+FV N L+DMYVKCG + +F M +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D VSW+++I+G+AQ G G EAL+LFR M SG +P+H+T++GVL+AC H G VEEG +
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M ++G+ P R+ +C+VDLL RAG + EA+ I +M D V+W SLLA+CK H N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+ +GK AE +L+++P+NS VLL N+YA GKWE+V + SM++ GV K PG SWI+
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
Query: 620 IQTKIH 625
IQ H
Sbjct: 637 IQGHDH 642
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 318/583 (54%), Gaps = 70/583 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S +++ + EAL F ++ +F + ++ +SAC+ L L +G ++H I S
Sbjct: 122 MVSGFAQRDRFEEAL-RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS 180
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + + +++MY KC + A+ FD+M RN+VSW ++I QNG A+E++
Sbjct: 181 RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK-SEHGSHLISQNALIAMYTK 228
V+M+ G+ PD+ T S+ AC+ L + G Q+HA V+K ++ + L+ NAL+ MY K
Sbjct: 241 VRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAK 300
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
R+ + AR VF+ M ++ S ++++G A
Sbjct: 301 CRRV----------------------------NEARLVFDRMPLRDVVSETSMVSGYAKA 332
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
S+ A +FS M +R ++ N +
Sbjct: 333 SSVKAARLMFSNMMERNVVS----------------------------------WNALIA 358
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+ E RLF L+ P H TF +++ ACA +A L++G Q H +I+K G
Sbjct: 359 GYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWF 418
Query: 409 ------DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
D+FV N L+DMY+KCG + R +F M + D VSW+++IVGYAQ G G EAL+
Sbjct: 419 KSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALE 478
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+FR M SG RP+HVT++GVL+ACSH GLVEEG ++ M E+G++P ++ +C+VDLL
Sbjct: 479 IFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLL 538
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + EA + I M + D VVW SLLA+CK HGN+ +GK AE +L+IDP NS V
Sbjct: 539 GRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYV 598
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL N+YA G+W++V R+ M++ GV K PG SWI IQ+ +H
Sbjct: 599 LLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLH 641
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 222/514 (43%), Gaps = 98/514 (19%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S +A L+ C +S+ R VH I+ ++ + + N ++++YGKCG LEDAR VFD
Sbjct: 20 SPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDH 79
Query: 141 MPQRNVV-------------------------------SWTAMIAGCSQNGQENAAIELY 169
M QRN SW AM++G +Q + A+
Sbjct: 80 MQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFV 139
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
V M + ++++FGS + AC+GL + +G Q+H + KS + + +AL+ MY+K
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKC 199
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ A F + ++I SW S+I + E P
Sbjct: 200 RVVASAQRAFDDMDVRNIVSWNSLITCY-----------EQNGP---------------- 232
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
A +A+ +F M + + PD +T+ S+ AC S ++ +G+QIH+ ++K Y N V
Sbjct: 233 -AGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLG 291
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
L + R+ L P D
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMP---------------------------------LRD 318
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V ++ Y K S+ +AR +F+ M + +VVSW++LI GY Q G EEA++LF ++
Sbjct: 319 VVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKR 378
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERR----SCVVDLLAR 524
+ P H T +L AC+++ ++ G Q + I+++ + + + ++D+ +
Sbjct: 379 ESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMK 438
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
G V + +M + D V W +++ +G
Sbjct: 439 CGLVEDGRLVFERM-LERDNVSWNAMIVGYAQNG 471
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 198/436 (45%), Gaps = 78/436 (17%)
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D F ++ C V R +HA +IK++ S + QN L+ +Y K
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKC---------- 67
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
GF L+ AR VF+ M+ N SWN ++ + +EA++LF
Sbjct: 68 ----------------GF--LEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFK 109
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
M +R+ C+ + +S GF + + E
Sbjct: 110 CMPERDQ-----------CSWNAMVS--------------GFAQ---------RDRFEEA 135
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
R M + + +F + ACA + L +G Q+H I K+ +LDV++ + L+DM
Sbjct: 136 LRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDM 195
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KC + SA+ F+ M+ ++VSW+SLI Y Q G +AL++F RM + G+ P+ +TL
Sbjct: 196 YSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITL 255
Query: 480 VGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV-----VDLLARAGRVHEAED 533
V +AC+ + + EGLQ++ R+M+++ + R V VD+ A+ RV+EA
Sbjct: 256 ASVASACASLSAIREGLQIHARVMKHD------KYRNDLVLGNALVDMYAKCRRVNEARL 309
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
++M D+V S+++ +V + N+++ + + AL+ Y +G+
Sbjct: 310 VFDRMPL-RDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIA---GYTQNGE 365
Query: 594 WEEVARLMGSMKERGV 609
EE RL +K +
Sbjct: 366 NEEAVRLFLLLKRESI 381
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/642 (33%), Positives = 347/642 (54%), Gaps = 70/642 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C LLD + + + R W+ LFS + L EA+ F + + I P+
Sbjct: 127 YAKCGLLDDSRRLFGGIVERNVVSWN-ALFSCYVQSELCGEAVGLFKEMVRSG---IMPN 182
Query: 82 TYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
++ +++AC+ L+ LGRK+H +L D N +++MY K G +E A VF
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
++ +VVSW A+IAGC + + A+ L +M SG P+ FT S ++AC+ + L
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKEL 302
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GRQLH+ +IK + S L + L+ MY+K +
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEM---------------------------- 334
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+D AR ++ M ++ +WN +I+G + C + +A+SLFS+M ++ + T+ ++L +
Sbjct: 335 MDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKS 394
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
S ++ QIH+ IK G YS+ V N++L
Sbjct: 395 VASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAY 454
Query: 353 --------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q+ GE +L+ M + KPD + ++ ACA +++ E G QLH + +K
Sbjct: 455 TSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIK 514
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G D+F N L++MY KCGS+ A F+ + + +VSWS++I GYAQ G G+EAL+L
Sbjct: 515 FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRL 574
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F +M GV PNH+TLV VL AC+H GLV EG Q + M+ +GI PT+E +C++DLL
Sbjct: 575 FNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLG 634
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
R+G+++EA + +N + F+ D VW +LL + + H N+++G++AA+ + ++P S VL
Sbjct: 635 RSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVL 694
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L NIYAS+G WE VA++ MK+ V+K PG SWIEI+ K++
Sbjct: 695 LANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVY 736
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 277/574 (48%), Gaps = 69/574 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + EAL+ F+ + + T+ ++ ACS R L +GRKVH + +
Sbjct: 53 LLSGYVQNGFVEEALLVFNEM-CLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVT 111
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + N ++ MY KCG L+D+R +F + +RNVVSW A+ + Q+ A+ L+
Sbjct: 112 GFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLF 171
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M++SG+MP++F+ I+ AC+GL LGR++H ++K S NAL+ MY+K
Sbjct: 172 KEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKA 231
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
I A VF IA D+ SWN IIAG
Sbjct: 232 GEIEGAVAVFQDIAHPDVV----------------------------SWNAIIAGCVLHD 263
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK----------- 338
+ A+ L EM P+ T+ S L AC + G Q+HS +IK
Sbjct: 264 CNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAV 323
Query: 339 ---------------KGFYSNVP-----VCNAILQ--HQAG---ELFRLFSLMLASQTKP 373
+ Y ++P NA++ Q G + LFS M +
Sbjct: 324 GLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDF 383
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+ T + V+ + A++ ++++ Q+H +K+G+ D +V+N L+D Y KC + A ++F
Sbjct: 384 NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF 443
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
D+V+++S+I Y+Q+G GEEALKL+ +M+ + ++P+ +L AC+++ E
Sbjct: 444 EERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYE 503
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+G QL+ + ++G + + +V++ A+ G + +A+ +++ + IV W +++
Sbjct: 504 QGKQLH-VHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIP-NRGIVSWSAMIGG 561
Query: 554 CKTHGNVDVGKRAAENILK--IDPTNSAALVLLC 585
HG+ R +L+ + P + + +LC
Sbjct: 562 YAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLC 595
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 240/522 (45%), Gaps = 69/522 (13%)
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
++H H++ D L NH++ +Y KC AR + DE + +VVSW+++++G QNG
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
A+ ++ +M G+ ++FTF S+++ACS + +GR++H + + S N
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
L+ MY K + D+ +F I +++ SW ++ F+ V +E+
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNAL--------FSCYVQSEL---------- 163
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
EA+ LF EM ++P+ ++ +L AC G +IH ++K G
Sbjct: 164 ----------CGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMG 213
Query: 341 FYSNVPVCNAILQ--HQAGEL----------------------------------FRLFS 364
+ NA++ +AGE+ L
Sbjct: 214 LDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLD 273
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
M S T+P+ T + + ACAAM E+G QLH ++K D+F GL+DMY KC
Sbjct: 274 EMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCE 333
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+ AR ++ M D+++W++LI GY+Q G +A+ LF +M S + N TL VL
Sbjct: 334 MMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLK 393
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
+ + + ++ Q++ I + GI + ++D + + EA + + +D+
Sbjct: 394 SVASLQAIKVCKQIHTI-SIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTW-EDL 451
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
V + S++ + +G+ G+ A + L++ + +C+
Sbjct: 452 VAYTSMITAYSQYGD---GEEALKLYLQMQDADIKPDPFICS 490
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/627 (34%), Positives = 331/627 (52%), Gaps = 76/627 (12%)
Query: 79 RP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDAR 135
RP S YA L+SA + G +H IL + P L NH+L YGK G AR
Sbjct: 3 RPLSSQYAALLSAAARTEPHVAG-ALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARAR 61
Query: 136 MVFDEMP-------------------------------QRNVVSWTAMIAGCSQNGQENA 164
VFD MP QR++VS+ A+IAG S G
Sbjct: 62 RVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQ 121
Query: 165 AIELYVQMLQ--SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+ +Y+ +LQ S + P + T +++ A S L LG+Q H +++ G++ + L
Sbjct: 122 AVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPL 181
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWN 279
+ MY K + DA F + K++ + +MI G + ++ AR +F M + +W
Sbjct: 182 VDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWT 241
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
T++ G +EA+ +F M + + D T S+L AC + +L QG QIH+YII+
Sbjct: 242 TMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301
Query: 340 GFYSNVPVCNAILQH---------------------------------QAG---ELFRLF 363
+ NV V +A++ Q G E R+F
Sbjct: 302 RYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVF 361
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
S M PD T V+ +CA +ASLE G Q HC + +GL + V N L+ +Y KC
Sbjct: 362 SEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKC 421
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
GS+ A LF+ M D VSW++L+ GYAQFG +E + LF +M + GV+P+ VT +GVL
Sbjct: 422 GSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVL 481
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
+ACS G VE+G + MQ ++GI+P + +C++DL +R+G++ EAE+FI QM D
Sbjct: 482 SACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPD 541
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+ W +LL++C+ G++++GK AAEN+L+IDP N A+ VLLC+++A+ G+W EVA+L
Sbjct: 542 AIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRG 601
Query: 604 MKERGVRKVPGQSWIEIQTKIHASGND 630
M++R V+K PG SWI+ + K+H D
Sbjct: 602 MRDRQVKKEPGCSWIKYKNKVHIFSAD 628
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 207/484 (42%), Gaps = 113/484 (23%)
Query: 50 LFSSLCKQNL--YNEALVAFD--------------FLQNNTNFRIRPSTYADLISACSSL 93
LF+S+ ++++ YN + F LQ +++ R T + ++ A S+L
Sbjct: 94 LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASAL 153
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV------ 147
LG++ H IL +A + + +++MY K + DA+ FDE+ +NVV
Sbjct: 154 GDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMI 213
Query: 148 -------------------------SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+WT M+ G +QNG E+ A+E++ +M G+ DQ+
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQY 273
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TFGSI+ AC L + G+Q+HA++I++ + ++ +AL+ MY+K I A VF +
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM 333
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
K+I SW ++I G+ G CS EA+ +FSEM
Sbjct: 334 TCKNIISWTALIVGY--------------------------GQNGCS--EEAVRVFSEMQ 365
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
+ PD T+ S++ +C + SL +G Q H + G + V NA++
Sbjct: 366 RDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIE 425
Query: 354 ---------------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
+A E LF MLA KPD +TF V+ AC+
Sbjct: 426 DAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACS 485
Query: 387 AMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSW 444
+E G + H G+ ++D+Y + G L A E M PD + W
Sbjct: 486 RAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGW 545
Query: 445 SSLI 448
+L+
Sbjct: 546 GTLL 549
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/634 (33%), Positives = 334/634 (52%), Gaps = 69/634 (10%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
A E + S + R D I L S L ++ + AL F+ +Q + ++P T A L+S
Sbjct: 266 AAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC---MKPDCVTVASLLS 322
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+S+ + G+++H +++ D ++ +L++Y KC +E A F NVV
Sbjct: 323 ACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVL 382
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W M+ Q G + + +++QM GLMP+Q+T+ SI+R C+ L + LG Q+H VI
Sbjct: 383 WNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVI 442
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
KS ++ + LI MY K +LD AR +
Sbjct: 443 KSGFQFNVYVCSVLIDMYAKH----------------------------GELDTARGILQ 474
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ ++ SW +IAG EA+ LF EM ++ + D + S + AC +L Q
Sbjct: 475 RLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQ 534
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQ---------------------------------HQ 355
G QIH+ G+ ++ + NA++ Q
Sbjct: 535 GQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQ 594
Query: 356 AG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+G E ++FS M + + + TF + A A A+++ G Q+H ++KTG +
Sbjct: 595 SGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEA 654
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ +Y KCGS+ A+ F M + +VVSW+++I GY+Q G G EA+ LF M+ G+
Sbjct: 655 SNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGL 714
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
PNHVT VGVL+ACSHVGLV EGL +R M E+G++P E CVVDLL RA + A
Sbjct: 715 MPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAR 774
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
+FI +M + D ++W++LL++C H N+++G+ AA ++L+++P +SA VLL N+YA SG
Sbjct: 775 EFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSG 834
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
KW+ R MK+RGV+K PG+SWIE++ IHA
Sbjct: 835 KWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHA 868
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 175/657 (26%), Positives = 311/657 (47%), Gaps = 116/657 (17%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
VD+ ++ FDDI W+ + S L + L ++ L F L N ST+A ++
Sbjct: 61 VDNAIKLFDDIPSSNVSFWN-KVISGLLAKKLASQVLGLFS-LMITENVTPDESTFASVL 118
Query: 88 SACSSLRS-LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
ACS ++ Q+ ++H I+ ++ N ++++Y K G ++ A++VF+ + ++
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSW AMI+G SQNG+E+ AI L+ QM +S ++P + F S++ AC+ + LG QLH
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
++K S NAL+ +Y+++ ++ A +FS + R+D S+ S+I G ++ F
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF---- 294
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
++ A+ LF +M + PD +TV SLL AC S +
Sbjct: 295 ------------------------SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAG 330
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQ--------------------------------- 353
Y+G Q+HSY+IK G S++ + ++L
Sbjct: 331 YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390
Query: 354 HQAGELFRLFSLMLASQTK---PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
Q G L + + L Q + P+ T+ ++ C ++ +L++G Q+H ++K+G +V
Sbjct: 391 GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+V + L+DMY K G L +AR + + + DVVSW+++I GY Q EALKLF+ M +
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQ 510
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY--GIIPTRERRSCVVDLLARAGRV 528
G+R +++ ++AC+ + + +G Q++ Y G + +V L AR GR
Sbjct: 511 GIRSDNIGFSSAISACAGIQALNQGQQIH---AQSYISGYSEDLSIGNALVSLYARCGRA 567
Query: 529 H---------EAEDFI-------------------------NQMAFDDDIVVWKSLLASC 554
+A+D I NQ + ++ + S +++
Sbjct: 568 QDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSAT 627
Query: 555 KTHGNVDVGKRAAENILKI--DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
N+ GK+ ++K D A+ VL+ +Y+ G E+ R M E+ V
Sbjct: 628 ANTANIKQGKQIHAMMIKTGYDSETEASNVLI-TLYSKCGSIEDAKREFFEMPEKNV 683
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 241/519 (46%), Gaps = 69/519 (13%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
R TY L C + SL +K+H I S + VL + ++++Y G +++A
Sbjct: 7 RANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIK 66
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS-GLC 195
+FD++P NV W +I+G + + L+ M+ + PD+ TF S++RACS G
Sbjct: 67 LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKA 126
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ Q+HA +I GS + N LI +Y+K + A VF + KD SW +MI
Sbjct: 127 PFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMIS 186
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G S+ N E +EA+ LF +M +IP S
Sbjct: 187 GLSQ--------NGRE--------------------DEAILLFCQMHKSAVIPTPYVFSS 218
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL-------------- 359
+L ACT G Q+H +I+K G S VCNA+ L + G L
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278
Query: 360 --------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+LF M KPD +T ++ ACA++ + G QLH
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
Y++K G++ D+ + L+D+YVKC + +A E F E +VV W+ ++V Y Q G E
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSE 398
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV 518
+ +F +M+ G+ PN T +L C+ +G ++ G Q++ +++++ G S +
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS--GFQFNVYVCSVL 456
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+D+ A+ G + A + ++ ++D+V W +++A H
Sbjct: 457 IDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 346/648 (53%), Gaps = 78/648 (12%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNF 76
L ++ + E +DS R FD+I W+ LFS + + EA+ F + +
Sbjct: 198 LVVMYAKCDEFLDS-KRLFDEIPERNVVSWN-ALFSCYVQIDFCGEAVGLFYEMVLSG-- 253
Query: 77 RIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
I+P+ ++ +++AC+ LR G+ +H +++ D N +++MY K G L DA
Sbjct: 254 -IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADA 312
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
VF+++ Q ++VSW A+IAGC + A+EL QM +SG+ P+ FT S ++AC+G+
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGM 372
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
LGRQLH+ ++K + S L L+ MY+K D + DA
Sbjct: 373 GLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA------------------- 413
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
R FN + +L +WN II+G + EA+SLF EM + + T+
Sbjct: 414 ---------RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLS 464
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-------------------- 354
++L + ++ Q+H +K GF+S++ V N+++
Sbjct: 465 TILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIG 524
Query: 355 ----------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
Q E +LF M + KPD + ++ ACA +++ E G QLH
Sbjct: 525 DLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLH 584
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+I+K G LD+F N L++MY KCGS+ A F+ + + +VSWS++I G AQ G G
Sbjct: 585 VHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGR 644
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+AL+LF +M GV PNH+TLV VL AC+H GLV E + M+ +G P +E +C+
Sbjct: 645 QALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACM 704
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
+DLL RAG+++EA + +N+M F+ + VW +LL + + H +V++G+RAAE + ++P S
Sbjct: 705 IDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKS 764
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIYAS+GKWE VA + M++ V+K PG SWIE++ K++
Sbjct: 765 GTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYT 812
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/613 (27%), Positives = 277/613 (45%), Gaps = 104/613 (16%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L + NF +Y+ L+S C + +SL+ G ++H HI S D + NH++N+Y KC
Sbjct: 46 LIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCR 105
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
+ AR + DE + ++VSW+A+I+G +QNG A+ + +M G+ ++FTF S+++
Sbjct: 106 NFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
ACS + + +G+Q+H V+ S + N L+ MY K D LD+ +F I +++ S
Sbjct: 166 ACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVS 225
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
W ++ + ++DF EA+ LF EM + P+
Sbjct: 226 WNALFSCYVQIDF----------------------------CGEAVGLFYEMVLSGIKPN 257
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------YS------------- 343
++ S++ ACT +G IH Y+IK G+ Y+
Sbjct: 258 EFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFE 317
Query: 344 ----------NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
N + +L + L M S P+ T + + ACA M E+
Sbjct: 318 KIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKEL 377
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G QLH +MK + D+FV GL+DMY KC L AR FN + + D+++W+++I GY+Q
Sbjct: 378 GRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ 437
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI------------ 501
+ EAL LF M G+ N TL +L + + + +V Q++ +
Sbjct: 438 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYV 497
Query: 502 ---MQNEYGI---IPTRER--RSCVV-DLL---------ARAGRVHEAEDF---INQMAF 540
+ + YG + ER C + DL+ A+ G+ EA + M
Sbjct: 498 VNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMEL 557
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAENILK----IDPTNSAALVLLCNIYASSGKWEE 596
D V SLL +C + GK+ +ILK +D +LV N+YA G ++
Sbjct: 558 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV---NMYAKCGSIDD 614
Query: 597 VARLMGSMKERGV 609
R + ERG+
Sbjct: 615 AGRAFSELTERGI 627
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 40/314 (12%)
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I V S + ++ + + P ++ LL C + SL G+QIH++I K G
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 341 FYSNVPVCNAILQ-HQAGELFRLFSLMLASQTKPD------------------------- 374
+ + N ++ + F ++ ++PD
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 375 ----------HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
TF+ V+ AC+ + L +G Q+H ++ +G DVFV N L+ MY KC
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
++ LF+ + + +VVSW++L Y Q EA+ LF M SG++PN +L ++
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVN 266
Query: 485 ACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
AC+ + G ++ +++ Y P + +VD+ A+ G + +A ++ D
Sbjct: 267 ACTGLRDSSRGKIIHGYLIKLGYDWDPFSA--NALVDMYAKVGDLADAISVFEKIK-QPD 323
Query: 544 IVVWKSLLASCKTH 557
IV W +++A C H
Sbjct: 324 IVSWNAVIAGCVLH 337
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/655 (32%), Positives = 334/655 (50%), Gaps = 109/655 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T+A ++ ACS L LG +VH I+ D V + +L+MY KC L+D+ +F E
Sbjct: 177 TTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSE 236
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P +N V W+A+IAGC QN + +EL+ +M + G+ Q + S+ R+C+GL + +G
Sbjct: 237 IPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVG 296
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI------ 254
QLHAH +K + GS + A + MY K + DA +F+S+ + + + ++I
Sbjct: 297 TQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRN 356
Query: 255 -DGFSKLDFARTV------FNEME-----------------------------SPNLASW 278
GF L F + + FNE+ N+
Sbjct: 357 EKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVA 416
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELI------------------------------- 307
N+I+ C +EA +F EM R+ +
Sbjct: 417 NSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRME 476
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI---------------- 351
PD T S+L AC+S +L GM+IH+ IIK G + V A+
Sbjct: 477 PDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKI 536
Query: 352 --------------------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
L + + F ML KPD+ T+ V+ ACA +AS+
Sbjct: 537 HDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASV 596
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+G Q+H I+K L DV++ + L+DMY KCG++ + +F + D V+W+++I GY
Sbjct: 597 GLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGY 656
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
AQ G GEEAL F RM+ VRPNH T V +L AC+H+G +++GL + M EYG+ P
Sbjct: 657 AQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQ 716
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E SC++D++ R+GR+ EA I +M F+ D V+W++LL+ CK HGN+++ ++A IL
Sbjct: 717 IEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAIL 776
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+++P +S+A +LL NIYA +G W +V+ + M+ ++K PG SWIE++ ++HA
Sbjct: 777 QLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHA 831
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 145/544 (26%), Positives = 253/544 (46%), Gaps = 56/544 (10%)
Query: 59 LYNEALVAFDFL------QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQ 112
LYN+ L F F QN T + T++ +I CS SL+ G++ H ++ S
Sbjct: 16 LYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFI 75
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEM------------------------------- 141
PD + N ++ MY +C L A VF++M
Sbjct: 76 PDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDT 135
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLG 200
P+R+VVSW +M++G QNG+ +I++++ M +S + DQ TF +++ACS L GLG
Sbjct: 136 PKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLG 195
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+H +++ +++ +AL+ MY K R+ D+ +FS I K+ W ++I G +
Sbjct: 196 IQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQN 255
Query: 261 D---FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL-------IPDG 310
D +F EM+ + +I A V A+ + +++ L I G
Sbjct: 256 DEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVG 315
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY-SNVPVCNAILQHQAGELFRLFSLMLAS 369
+ C SL +I + + K N + + + E + F L+L S
Sbjct: 316 TATLDMYAKCG---SLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKS 372
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+ I+ + ACA++ G QLH +K+ L ++ V N ++DMY KC +L A
Sbjct: 373 GLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEA 432
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+F+ ME D VSW+++I + Q G EE L LF M + P+ T VL ACS
Sbjct: 433 CCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQ 492
Query: 490 GLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+ G++++ RI+++ G+ ++D+ + G + EA+ +++ +V W
Sbjct: 493 QALNSGMEIHNRIIKSGLGL--DSFVGGALIDMYCKCGMIEEAKKIHDRIE-QQTMVSWN 549
Query: 549 SLLA 552
+++A
Sbjct: 550 AIIA 553
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 222/499 (44%), Gaps = 87/499 (17%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
H S + +L+N L ++ C ++ + ++P + + +++ +I CS
Sbjct: 4 HTSSLRLIASRILYNKTLRIFTFC-TISTLQQNQTKLPTK-IRTFSHIIQECSDYNSLKP 61
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
+ + +M+ SG +PD + N L+
Sbjct: 62 GKQAHARMIVSGFIPDVYI-----------------------------------SNCLMK 86
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTI 281
MY + + A+ VF ++++D+ S+ +MI G++ +++ A F + ++ SWN++
Sbjct: 87 MYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSM 146
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIP-DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
++G +++ +F +MG E + D T +L AC+ G+Q+H I++ G
Sbjct: 147 LSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMG 206
Query: 341 FYSNVPVCNAILQHQAG-----ELFRLFS------------LMLASQTKPDHI------- 376
FY +V +A+L A + ++FS ++ +HI
Sbjct: 207 FYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFK 266
Query: 377 ------------TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
+ V +CA +++L++GTQLH + +K D+ V +DMY KCG
Sbjct: 267 EMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCG 326
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
SL A+ +FN + + ++++IVG + G EAL+ F+ + SG+ N ++L G +
Sbjct: 327 SLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFS 386
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVHEAEDFINQMAF 540
AC+ + +G QL+ + + T CV +D+ + + EA ++M
Sbjct: 387 ACASIKGDLDGRQLHSL-----SVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME- 440
Query: 541 DDDIVVWKSLLASCKTHGN 559
D V W +++A+ + +GN
Sbjct: 441 RRDAVSWNAVIAAHEQNGN 459
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 304/558 (54%), Gaps = 69/558 (12%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+F + ++A +SAC++ + L+ G +VH + S D + +++MY KC DA
Sbjct: 146 DFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDA 205
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R VFD MP+RNVVSW ++I QNG A+ L+V+M+ +G PD+ T S++ AC+GL
Sbjct: 206 RRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGL 265
Query: 195 CCVGLGRQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
GRQ+HAH++K + ++ NAL+ MY K R W
Sbjct: 266 AAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRT---WE---------------- 306
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
AR +F+ M S ++ S +I+AG A +N +A +FS+M ++ +I
Sbjct: 307 ---------ARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIA----- 352
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKP 373
NV + + E RLF + P
Sbjct: 353 -----------------------------WNVLIAAYAQNGEEEEAIRLFVQLKRDSIWP 383
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD------VFVMNGLMDMYVKCGSLG 427
H T+ +V+ AC +A L++G Q H +++K G D VFV N L+DMY+K GS+
Sbjct: 384 THYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSID 443
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F M D VSW+++IVGYAQ G ++AL LF RM S P+ VT++GVL+AC
Sbjct: 444 DGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACG 503
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLV+EG + + M ++GI P+R+ +C+VDLL RAG + EAE+ I M + D V+W
Sbjct: 504 HSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLW 563
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
SLL +C+ H NV++G+R A + ++DP NS VLL N+YA GKW +V R+ SMK+R
Sbjct: 564 ASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDR 623
Query: 608 GVRKVPGQSWIEIQTKIH 625
GV K PG SWIEI +K++
Sbjct: 624 GVSKQPGCSWIEIGSKMN 641
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 208/516 (40%), Gaps = 103/516 (19%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S ADL+ + SL R H +L S + L N +++ Y + G L +AR VFD
Sbjct: 21 SPLADLLRSAPSLPG---ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDG 77
Query: 141 MPQRNVVSWTAMIAG----------------------CSQN-----------GQENAAIE 167
+P RN S+ A+++ CS N G A+
Sbjct: 78 IPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALR 137
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
M + + ++F S + AC+ + G Q+H V +S H + AL+ MY
Sbjct: 138 FLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYA 197
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K +R +DA VF ++ +++ SW S+I + E P
Sbjct: 198 KCERPVDARRVFDAMPERNVVSWNSLITCY-----------EQNGP-------------- 232
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
EA+ LF EM PD +T+ S++ AC + +G Q+H++++K+ + V
Sbjct: 233 ---VGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMV 289
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
N L + R + + P ++
Sbjct: 290 LNNALVDMYAKCGRTWEARCIFDSMPSRSVVSET-------------------------- 323
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
++ Y K ++ A+ +F+ M + +V++W+ LI YAQ G EEA++LF ++
Sbjct: 324 -------SILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE-----YGIIPTRERRSCVVDLL 522
+ + P H T VL AC ++ +++ G Q + + E +G + +VD+
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + + +MA D+ V W +++ +G
Sbjct: 437 LKTGSIDDGAKVFERMAARDN-VSWNAMIVGYAQNG 471
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 170/410 (41%), Gaps = 64/410 (15%)
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
R H V+KS N L++ Y + R+ +A VF I +
Sbjct: 36 ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLR-------------- 81
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
N S+N +++ A +EA +LF + D PD + +++ A
Sbjct: 82 --------------NTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAA 123
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ + G + AG+ R + M A + +F
Sbjct: 124 ----------------LARHG------------RGHAGDALRFLAAMHADDFVLNAYSFA 155
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+ ACAA L G Q+H + ++ A DV + L+DMY KC AR +F+ M +
Sbjct: 156 SALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPER 215
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+VVSW+SLI Y Q G EAL LF M ++G P+ VTL V++AC+ + EG Q++
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVH 275
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M + + +VD+ A+ GR EA + M +V S+LA N
Sbjct: 276 AHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP-SRSVVSETSILAGYAKSAN 334
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
V+ + +++ N A +L YA +G+ EE RL +K +
Sbjct: 335 VEDAQVVFSQMVE---KNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/616 (33%), Positives = 330/616 (53%), Gaps = 71/616 (11%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV--- 146
C L+ + +K+H HI+ + P+ L N++++ Y K + AR VFD+MPQRN+
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 147 ----------------------------VSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
VSW ++I+ + G +++ Y ML +G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 179 P-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
++ +++ S CV LG Q+H HV+K S++ + L+ MY+K + A
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 238 VFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
F + K++ + ++I G S+++ +R +F +M+ + SW +IAG EA
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ- 353
+ LF EM L D T S+L AC ++L +G Q+H+YII+ + N+ V +A++
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 354 -------HQAGELFR----------------------------LFSLMLASQTKPDHITF 378
A +FR +F M + +PD T
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ +CA +ASLE G Q HC + +GL + V N L+ +Y KCGS+ + LF+ M
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY 438
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D VSW++L+ GYAQFG E L+LF M + G +P+ VT +GVL+ACS GLV++G Q+
Sbjct: 439 VDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ M E+ IIP + +C++DL +RAGR+ EA FIN+M F D + W SLL+SC+ H
Sbjct: 499 FESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHR 558
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N+++GK AAE++LK++P N+A+ +LL +IYA+ GKWEEVA L M+++G+RK PG SWI
Sbjct: 559 NMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWI 618
Query: 619 EIQTKIHASGNDISGN 634
+ + ++H D N
Sbjct: 619 KYKNQVHIFSADDQSN 634
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 210/468 (44%), Gaps = 97/468 (20%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S+ + +++ A++ + N F + + ++ S + LG +VH H++
Sbjct: 112 LISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKF 171
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV---------------------- 147
Q + + +++MY K G + AR FDEMP++NVV
Sbjct: 172 GFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLF 231
Query: 148 ---------SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
SWTAMIAG +QNG + AI+L+ +M L DQ+TFGS++ AC G+ +
Sbjct: 232 YDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQ 291
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+Q+HA++I++++ ++ +AL+ MY K I A VF + K++ SW +M+ G+
Sbjct: 292 EGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYG 351
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ ++ EA+ +F +M + + PD T+ S++
Sbjct: 352 QNGYSE----------------------------EAVKIFCDMQNNGIEPDDFTLGSVIS 383
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------- 353
+C + SL +G Q H + G S + V NA++
Sbjct: 384 SCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVS 443
Query: 354 -----------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+A E RLF MLA KPD +TF V+ AC+ ++ G Q+ ++
Sbjct: 444 WTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMI 503
Query: 403 KTGLALDVF-VMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
K + + ++D++ + G L AR+ N M PD + W+SL+
Sbjct: 504 KEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLL 551
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 158/325 (48%), Gaps = 35/325 (10%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
N + T+ +++AC + +LQ G++VH +I+ + Q + + + +++MY KC S++ A
Sbjct: 269 NLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSA 328
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
VF +M +NVVSWTAM+ G QNG A++++ M +G+ PD FT GS+I +C+ L
Sbjct: 329 ETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANL 388
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G Q H + S S + NAL+ +Y K I D+ +FS ++ D SW +++
Sbjct: 389 ASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALV 448
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
G+++ ANE + LF M PD +T
Sbjct: 449 SGYAQF----------------------------GKANETLRLFESMLAHGFKPDKVTFI 480
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLAS 369
+L AC+ + +G QI +IK+ + +P+ C L +AG L +
Sbjct: 481 GVLSACSRAGLVQKGNQIFESMIKE--HRIIPIEDHYTCMIDLFSRAGRLEEARKFINKM 538
Query: 370 QTKPDHITFNDVMGACAAMASLEMG 394
PD I + ++ +C ++E+G
Sbjct: 539 PFSPDAIGWASLLSSCRFHRNMEIG 563
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 131/265 (49%), Gaps = 22/265 (8%)
Query: 57 QNLYNE-ALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
QN Y+E A+ F +QNN I P T +IS+C++L SL+ G + H L S
Sbjct: 352 QNGYSEEAVKIFCDMQNNG---IEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLIS 408
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+ N ++ +YGKCGS+ED+ +F EM + VSWTA+++G +Q G+ N + L+ ML
Sbjct: 409 FITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESML 468
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN--ALIAMYTKFDR 231
G PD+ TF ++ ACS V G Q+ +IK EH I + +I ++++ R
Sbjct: 469 AHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK-EHRIIPIEDHYTCMIDLFSRAGR 527
Query: 232 ILDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTV---------FNEMESPNLASWNTI 281
+ +A + + D W S++ S F R + ++E N AS+ +
Sbjct: 528 LEEARKFINKMPFSPDAIGWASLL---SSCRFHRNMEIGKWAAESLLKLEPHNTASYILL 584
Query: 282 IAGVASCSNANEAMSLFSEMGDREL 306
+ A+ E +L M D+ L
Sbjct: 585 SSIYAAKGKWEEVANLRKGMRDKGL 609
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 303/558 (54%), Gaps = 69/558 (12%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+F + ++A +SAC++ + + G +VH + S D + + +++MY KC EDA
Sbjct: 146 DFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDA 205
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R VFD MP+RNVVSW ++I QNG A+ L+V+M+ +G PD+ T S++ AC+GL
Sbjct: 206 RRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGL 265
Query: 195 CCVGLGRQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
GRQ+HAH++K + ++ NAL+ MY K R W
Sbjct: 266 AADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRT---WE---------------- 306
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
AR +F+ M S ++ S +I+ G A +N +A +FS+M ++ +I
Sbjct: 307 ---------ARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIA----- 352
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKP 373
NV + + E RLF + P
Sbjct: 353 -----------------------------WNVLIAAYAQNGEEEEAIRLFVQLKRDSIWP 383
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD------VFVMNGLMDMYVKCGSLG 427
H T+ +V+ AC +A L++G Q H +++K G D VFV N L+DMY+K GS+
Sbjct: 384 THYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSID 443
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F M D VSW+++IVGYAQ G ++AL LF RM S P+ VT++GVL+AC
Sbjct: 444 DGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACG 503
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLV+EG + + M ++GI P+R+ +C+VDLL RAG + EAE+ IN M + D V+W
Sbjct: 504 HSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLW 563
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
SLL +C+ H NV++G+ A + ++DP NS VLL N+YA GKW EV R+ SMK+R
Sbjct: 564 ASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDR 623
Query: 608 GVRKVPGQSWIEIQTKIH 625
GV K PG SWIEI K++
Sbjct: 624 GVSKQPGCSWIEIGRKMN 641
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 128/565 (22%), Positives = 225/565 (39%), Gaps = 104/565 (18%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S ADL+ + +L R H IL S + L N +++ Y + G L DAR VFDE
Sbjct: 21 SPLADLLRSAPNLSG---ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDE 77
Query: 141 MPQRNVVSWTAMIAG----------------------CSQN-----------GQENAAIE 167
+P RN S+ A+++ CS N G A+
Sbjct: 78 IPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALR 137
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
M + + ++F S + AC+ G Q+H V +S H + ++AL+ MY
Sbjct: 138 FLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYA 197
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K +R DA VF ++ +++ SW S+I + E P
Sbjct: 198 KCERPEDARRVFDAMPERNVVSWNSLITCY-----------EQNGP-------------- 232
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
EA+ LF EM PD +T+ S++ AC + +G Q+H++++K + V
Sbjct: 233 ---VGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMV 289
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
N L + R + + P ++
Sbjct: 290 LNNALVDMYAKCGRTWEARCIFDSMPSRSIVSET-------------------------- 323
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
++ Y K ++ A+ +F+ M + +V++W+ LI YAQ G EEA++LF ++
Sbjct: 324 -------SILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQ-----LYRIMQNEYGIIPTRERRSCVVDLL 522
+ + P H T VL AC ++ ++ G Q L + ++G + +VD+
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL-KIDPTNSAAL 581
+ G + + +MA D+ V W +++ +G E +L + +S +
Sbjct: 437 LKTGSIDDGAKVFERMAARDN-VSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTM 495
Query: 582 VLLCNIYASSGKWEEVARLMGSMKE 606
+ + + SG +E R SM E
Sbjct: 496 IGVLSACGHSGLVDEGRRYFHSMTE 520
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 171/410 (41%), Gaps = 64/410 (15%)
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
R HA ++KS N L++ Y + R+ DA
Sbjct: 36 ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDA------------------------ 71
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
R VF+E+ N S+N +++ A +EA +LF + D PD + +++ A
Sbjct: 72 ----RRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAA 123
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ + G + A + R + M A + +F
Sbjct: 124 ----------------LARHG------------RGHAADALRFLAAMHADDFVLNAYSFA 155
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+ ACAA G Q+H + ++ A DV + + L+DMY KC AR +F+ M +
Sbjct: 156 SALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPER 215
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+VVSW+SLI Y Q G EAL LF M ++G P+ VTL V++AC+ + EG Q++
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVH 275
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M + + +VD+ A+ GR EA + M IV S+L N
Sbjct: 276 AHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP-SRSIVSETSILTGYAKSAN 334
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
V+ + +++ N A +L YA +G+ EE RL +K +
Sbjct: 335 VEDAQVVFSQMVE---KNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 199/558 (35%), Positives = 305/558 (54%), Gaps = 69/558 (12%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+F + ++A +SAC+S ++ + G +VH + S D + +++MY KC E+A
Sbjct: 142 DFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEA 201
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+ VFD MP+RN+VSW ++I QNG + A+ L+V+M++ G +PD+ T S++ AC+GL
Sbjct: 202 QKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGL 261
Query: 195 CCVGLGRQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
GRQ+H ++KS+ ++ NAL+ MY K R +A VF +A + + S SM
Sbjct: 262 AAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSM 321
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
I G A +N +A ++F +M ++ ++
Sbjct: 322 ----------------------------ITGYAKSANVGDAQAVFLQMVEKNVVA----- 348
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKP 373
NV + + E RLF + P
Sbjct: 349 -----------------------------WNVLIATYAHNSEEEEALRLFVRLKRESVWP 379
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD------VFVMNGLMDMYVKCGSLG 427
H T+ +V+ ACA +A+L++G Q H +++K G D VFV N L+DMY+K GS+
Sbjct: 380 THYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSIS 439
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F M D VSW+++IVGYAQ G ++AL LF RM S RP+ VT++GVL+AC
Sbjct: 440 DGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACG 499
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLV+EG + ++ M ++GIIPTR+ +C++DLL RAG + E E+ I M + D V+W
Sbjct: 500 HSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLW 559
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
SLL +C+ H N+D+G+ AA + ++DP NS VLL N+YA GKW +V R+ SMK R
Sbjct: 560 ASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHR 619
Query: 608 GVRKVPGQSWIEIQTKIH 625
GV K PG SWIEI K++
Sbjct: 620 GVSKQPGCSWIEIGRKVN 637
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 130/530 (24%), Positives = 223/530 (42%), Gaps = 99/530 (18%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY---- 169
+ L N +L+ Y + GSL DAR VFD MP RN S+ A+++ C++ G+ + A+ L+
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 170 -----------VQMLQSGLMPD----------------QFTFGSIIRACSGLCCVGLGRQ 202
+ Q G D ++F S + AC+ G Q
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQ 168
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+HA V KS HGS + AL+ MY K +R +A VF ++ ++I SW S+I +
Sbjct: 169 VHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCY----- 223
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
E P +EA++LF M +PD +T+ S++ AC
Sbjct: 224 ------EQNGP-----------------VDEALALFVRMMKDGFVPDEVTLASVMSACAG 260
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVM 382
+ +G Q+H+ ++K + V N L + R + ++ D + V+
Sbjct: 261 LAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWE----AKCVFDRMAIRSVV 316
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
+ M TG Y K ++G A+ +F M + +VV
Sbjct: 317 SETS---------------MITG--------------YAKSANVGDAQAVFLQMVEKNVV 347
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RI 501
+W+ LI YA EEAL+LF R++ V P H T VL AC+++ ++ G Q + +
Sbjct: 348 AWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHV 407
Query: 502 MQNEYGIIPTRERR----SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ + E + +VD+ + G + + +MA D+ V W +++ +
Sbjct: 408 LKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDN-VSWNAMIVGYAQN 466
Query: 558 GNVDVGKRAAENIL-KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
G E +L + +S ++ + + SG +E R SM E
Sbjct: 467 GRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTE 516
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 218/643 (33%), Positives = 343/643 (53%), Gaps = 70/643 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C ++ A +V D+ R +W+ L QN Y ++ F
Sbjct: 394 YAKCEKMEAAKKVFDALDERNLVLWNAMLGGY--AQNGYASKVMKLFSEMRGCGFWPDEF 451
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY ++SAC+ L L++GR++H I+ + + + N +++MY KCG+LE+AR F+ +
Sbjct: 452 TYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFI 511
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R+ VSW A+I G Q E+ A ++ +M+ G+ PD+ + SI+ C+ L + G
Sbjct: 512 RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE 571
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H ++KS + L + ++LI MY K I +
Sbjct: 572 QVHCFLVKSGLQTCLYAGSSLIDMYVKCGAI----------------------------E 603
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR VF+ M S ++ S N IIAG A ++ EA+ LF EM + L P +T SLL ACT
Sbjct: 604 AARYVFSCMPSRSVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSEITFASLLDACT 662
Query: 322 SPLSLYQGMQIHSYIIKKGFYSN---------VPVCNAILQHQAGELF------------ 360
P L G QIH I K+G + V N+ + A LF
Sbjct: 663 GPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILW 722
Query: 361 -----------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+L+ M + +PD TF V+ AC+ +ASL G +H I
Sbjct: 723 TAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFH 782
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALK 462
GL D + ++DMY KCG + S+ ++F M DV+SW+S+IVG+A+ G E ALK
Sbjct: 783 VGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALK 842
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+F M+ + +RP+ VT +GVLTACSH G V EG +++ IM + Y I+P + +C++DLL
Sbjct: 843 IFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLL 902
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G + EAE+FI+++ F+ + ++W +LL +C+ HG+ G+RAAE +++++P NS+ V
Sbjct: 903 GRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYV 962
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL NIYA+SG W+EV + +M+E+G+RK+PG SWI + K +
Sbjct: 963 LLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTN 1005
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 255/547 (46%), Gaps = 75/547 (13%)
Query: 66 AFDFLQN--NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A DF +N T + ST ++SA +SL +L G VH + + + + ++N
Sbjct: 333 AIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLIN 392
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY KC +E A+ VFD + +RN+V W AM+ G +QNG + ++L+ +M G PD+FT
Sbjct: 393 MYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFT 452
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+ SI+ AC+ L C+ +GRQLH+ +IK +L +N L+ MY K + +A F I
Sbjct: 453 YTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIR 512
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+D SW N II G + +EA ++F M
Sbjct: 513 NRDNVSW----------------------------NAIIVGYVQEEDEDEAFNMFRRMIL 544
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-------------------- 343
+ PD +++ S+L C + +L QG Q+H +++K G +
Sbjct: 545 DGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEA 604
Query: 344 -----------NVPVCNAIL----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAM 388
+V NAI+ Q+ E LF M P ITF ++ AC
Sbjct: 605 ARYVFSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGP 664
Query: 389 ASLEMGTQLHCYIMKTGLALDV-FVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSS 446
L +G Q+HC I K GL D F+ L+ MY+ A LF+ + P + W++
Sbjct: 665 YKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTA 724
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I G+ Q GC EEAL+L++ M + RP+ T VL ACS + + +G ++ ++ +
Sbjct: 725 IISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFH-V 783
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
G+ S VVD+ A+ G + + +M +D++ W S++ +G
Sbjct: 784 GLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNG-------Y 836
Query: 567 AENILKI 573
AEN LKI
Sbjct: 837 AENALKI 843
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 173/658 (26%), Positives = 312/658 (47%), Gaps = 95/658 (14%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A + + +R W+ + S +Q + + F LQN +
Sbjct: 124 DLYAKCGNVEFAAKAFNQLEKRDILAWN-SVLSMYSRQGSLEQVIWCFGSLQNCG---VS 179
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P+ TYA ++S+C+ L + LG++VH ++ + ++ +++MY KCGSL DAR +
Sbjct: 180 PNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKI 239
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD + + VSWTAMIAG Q G A++++ M + GL+PDQ F ++I A CV
Sbjct: 240 FDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITA-----CV 294
Query: 198 GLGRQLHA-HVIKSEHGSHLISQNALIAMYTK-------FDRILDAW------------N 237
GLGR A + +++++ N +I+ + K D + W +
Sbjct: 295 GLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGS 354
Query: 238 VFSSIARKDITSWG--------------------SMIDGFS---KLDFARTVFNEMESPN 274
V S+IA + ++G S+I+ ++ K++ A+ VF+ ++ N
Sbjct: 355 VLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN 414
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
L WN ++ G A A++ M LFSEM PD T S+L AC L G Q+HS
Sbjct: 415 LVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS 474
Query: 335 YIIKKGFYSNVPVCNAIL------------------------------------QHQAGE 358
+IIK F N+ V N ++ + E
Sbjct: 475 FIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDE 534
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
F +F M+ PD ++ ++ CA + +LE G Q+HC+++K+GL ++ + L+D
Sbjct: 535 AFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLID 594
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MYVKCG++ +AR +F+ M VVS +++I GYAQ EA+ LF+ M++ G+ P+ +T
Sbjct: 595 MYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEIT 653
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+L AC+ + G Q++ ++Q + ++ + + R +A+ ++
Sbjct: 654 FASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEF 713
Query: 539 AFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
+ ++W ++++ +G + + + N + D A+++ C+I AS G
Sbjct: 714 QYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLG 771
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 242/506 (47%), Gaps = 75/506 (14%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+ +H L L + I+++Y KCG++E A F+++ +R++++W ++++ S+
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G I + + G+ P+QFT+ ++ +C+ L + LG+Q+H VIK + +
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---------------------- 257
+LI MY+K ++DA +F ++ D SW +MI G+
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280
Query: 258 ----------------SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+LD A +F +M + N+ +WN +I+G EA+ F M
Sbjct: 281 PDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNM 340
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH------- 354
+ T+ S+L A S +L G+ +H+ IK+G SNV V ++++
Sbjct: 341 WKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKM 400
Query: 355 -----------------------------QAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
A ++ +LFS M PD T+ ++ AC
Sbjct: 401 EAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSAC 460
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A + LEMG QLH +I+K ++FV N L+DMY KCG+L AR+ F F+ + D VSW+
Sbjct: 461 ACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWN 520
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
++IVGY Q +EA +FRRM G+ P+ V+L +L+ C+++ +E+G Q++ +
Sbjct: 521 AIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS 580
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEA 531
G+ S ++D+ + G + A
Sbjct: 581 -GLQTCLYAGSSLIDMYVKCGAIEAA 605
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 154/354 (43%), Gaps = 81/354 (22%)
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+ I+ A C N A F+++ R+++ A S LS+Y +
Sbjct: 120 SAIVDLYAKCGNVEFAAKAFNQLEKRDIL-----------AWNSVLSMYS---------R 159
Query: 339 KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+G V C LQ+ P+ T+ V+ +CA + +++G Q+H
Sbjct: 160 QGSLEQVIWCFGSLQN--------------CGVSPNQFTYAIVLSSCARLVDIDLGKQVH 205
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
C ++K G + F L+DMY KCGSL AR++F+ + DPD VSW+++I GY Q G E
Sbjct: 206 CGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPE 265
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI-----IPTRE 513
EALK+F M+ G+ P+ V V V+TAC +G +++ L+ M N + I
Sbjct: 266 EALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHV 325
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK-THGNVDVGKRAAENILK 572
+R C + EA DF M WK+ + S + T G+V I
Sbjct: 326 KRGCDI----------EAIDFFKNM--------WKTGVKSTRSTLGSV------LSAIAS 361
Query: 573 IDPTNSAALV-----------------LLCNIYASSGKWEEVARLMGSMKERGV 609
++ N LV L N+YA K E ++ ++ ER +
Sbjct: 362 LEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNL 415
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 154/362 (42%), Gaps = 37/362 (10%)
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+ +HA +K GS +A++ +Y K + A F+ + ++DI +W S++ +S+
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSR- 159
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
S +I S N + P+ T +L +C
Sbjct: 160 --------------QGSLEQVIWCFGSLQNCG-------------VSPNQFTYAIVLSSC 192
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---QHQAGELFRLFSLMLASQTKPDHIT 377
+ + G Q+H +IK GF N C L + G L + A PD ++
Sbjct: 193 ARLVDIDLGKQVHCGVIKMGFEFN-SFCEGSLIDMYSKCGSLVDARKIFDAV-VDPDTVS 250
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ ++ + E ++ + K GL D ++ V G L A +LF M
Sbjct: 251 WTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMP 310
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ +VV+W+ +I G+ + GC EA+ F+ M +GV+ TL VL+A + + + GL
Sbjct: 311 NTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGL- 369
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD-DIVVWKSLLASCKT 556
L + G+ S ++++ A+ ++ A+ + A D+ ++V+W ++L
Sbjct: 370 LVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFD--ALDERNLVLWNAMLGGYAQ 427
Query: 557 HG 558
+G
Sbjct: 428 NG 429
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H +K G + + ++D+Y KCG++ A + FN +E D+++W+S++ Y++ G
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER-- 514
E+ + F +++ GV PN T VL++C+ + ++ G Q++ G+I
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVH------CGVIKMGFEFN 216
Query: 515 ---RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
++D+ ++ G + +A + + D D V W +++A G V VG E L
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVV-DPDTVSWTAMIA-----GYVQVG--LPEEAL 268
Query: 572 KI 573
K+
Sbjct: 269 KV 270
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 317/586 (54%), Gaps = 64/586 (10%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P Y + ++SACS L L+ G+++H HIL + DA L N +++ Y KCG + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+F+ MP +N++SWT +++G QN A+EL+ M + GL PD + SI+ +C+ L
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G G Q+HA+ IK+ G+ N+LI MY K D + DA VF A D+ + +MI+
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+S+L W +EA+++F +M R + P LT S
Sbjct: 425 GYSRLG--------------TQWEL-----------HEALNIFRDMRFRLIRPSLLTFVS 459
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGF-------------YSN------------------ 344
LL A S SL QIH + K G YSN
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 345 VPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ + N++ Q + E LF + S+ +PD TF +++ A +AS+++G + HC
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
++K GL + ++ N L+DMY KCGS A + F+ DVV W+S+I YA G G++
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL++ +M S G+ PN++T VGVL+ACSH GLVE+GL+ + +M +GI P E C+V
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMV 698
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
LL RAGR+++A + I +M +VW+SLL+ C GNV++ + AAE + DP +S
Sbjct: 699 SLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSG 758
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ +L NIYAS G W E ++ MK GV K PG+SWI I ++H
Sbjct: 759 SFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVH 804
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/561 (26%), Positives = 266/561 (47%), Gaps = 80/561 (14%)
Query: 57 QNLYNEALVAF-DFLQNNTNFRIRPSTY--ADLISACSSL--RSLQLGRKVHDHILSSKC 111
+Y E+LV F +F + + P+ Y + I ACS L R + ++ ++ S
Sbjct: 123 HGIYEESLVVFLEFWRTRKD---SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF 179
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
D + +++ Y K G+++ AR+VFD +P+++ V+WT MI+GC + G+ +++L+ Q
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
+++ ++PD + +++ ACS L + G+Q+HAH+++ N LI Y K R
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
++ A +F+ + K+I SW +++ G+ + N +
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQ--------NALH-------------------- 331
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
EAM LF+ M L PD S+L +C S +L G Q+H+Y IK ++ V N++
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSL 391
Query: 352 L---------------------------------------QHQAGELFRLFSLMLASQTK 372
+ Q + E +F M +
Sbjct: 392 IDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIR 451
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P +TF ++ A A++ SL + Q+H + K GL LD+F + L+D+Y C L +R +
Sbjct: 452 PSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLV 511
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ M+ D+V W+S+ GY Q EEAL LF ++ S RP+ T ++TA ++ V
Sbjct: 512 FDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ G Q + + G+ + ++D+ A+ G +A + A D+V W S+++
Sbjct: 572 QLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVIS 629
Query: 553 SCKTHGNVDVGKRAAENILKI 573
S HG GK+A + + K+
Sbjct: 630 SYANHGE---GKKALQMLEKM 647
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 243/514 (47%), Gaps = 76/514 (14%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+A L+ +S L VH I+ + D L N ++N+Y + G + AR VF++MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIRACSGLCCVGLGR 201
+RN+VSW+ M++ C+ +G ++ ++++ ++ P+++ S I+ACSGL G GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGR 164
Query: 202 ----QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
QL + ++KS + LI Y K I A VF ++ K +W +MI G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
K+ + ++ LF ++ + ++PDG + ++L
Sbjct: 225 VKM----------------------------GRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELF--------- 360
AC+ L G QIH++I++ G + + N ++ A +LF
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 361 -------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
LF+ M KPD + ++ +CA++ +L GTQ+H Y
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG---E 458
+K L D +V N L+DMY KC L AR++F+ DVV ++++I GY++ G
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EAL +FR MR +RP+ +T V +L A + + + Q++ +M +YG+ S +
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSAL 495
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+D+ + + ++ ++M D+V+W S+ A
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFA 528
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H I+ GL LD ++ N L+++Y + G + AR++F M + ++VSWS+++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 457 GEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EE+L +F R+ PN L + ACS GL +G + + Q + ++ + R
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GL--DGRGRWMVFQLQSFLVKSGFDR 181
Query: 516 -----SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++D + G + A + + + V W ++++ C G
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMG 228
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 210/586 (35%), Positives = 315/586 (53%), Gaps = 64/586 (10%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P Y + ++SACS L L+ G+++H HIL + DA L N +++ Y KCG + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAH 304
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD MP +N++SWT +++G QN A+EL+ M + GL PD F SI+ +C+ L
Sbjct: 305 KLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLH 364
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G Q+HA+ IK+ G+ N+LI MY K D + +A VF A D+ + +MI+
Sbjct: 365 ALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIE 424
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+S+L W ++A+++F +M R + P LT S
Sbjct: 425 GYSRLG--------------TQWEL-----------HDALNIFHDMRFRLIRPSLLTFVS 459
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGF-------------YSN------------------ 344
LL A S SL QIH + K G YSN
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKD 519
Query: 345 VPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ + N++ Q + E LF + S+ +PD TF D++ A +ASL++G + HC
Sbjct: 520 LVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHC 579
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
++K GL + ++ N L+DMY KCGS A + F+ DVV W+S+I YA G G +
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRK 639
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL++ +M G+ PN++T VGVL+ACSH GLVE+GL+ + +M +GI P E C+V
Sbjct: 640 ALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMV 698
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
LL RAGR++EA + I +M +VW+SLL+ C GNV++ + AAE + DP +S
Sbjct: 699 SLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSG 758
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ LL NIYAS G W + ++ MK GV K PG+SWIEI ++H
Sbjct: 759 SFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVH 804
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 150/563 (26%), Positives = 269/563 (47%), Gaps = 84/563 (14%)
Query: 57 QNLYNEALVAF-DFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGR----KVHDHILSS 109
Y E+LV F DF + N P+ Y + I ACS L GR ++ ++ S
Sbjct: 123 HGFYEESLVVFLDFWRTRKN---SPNEYILSSFIQACSGLDGS--GRWMVFQLQSFLVKS 177
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + +++ Y K G+++ AR+VFD +P+++ V+WT MI+GC + G+ +++L+
Sbjct: 178 RFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
Q+++ ++PD + +++ ACS L + G+Q+HAH+++ H N LI Y K
Sbjct: 238 YQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKC 297
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
R+ A +F + K+I SW +++ G+ + +
Sbjct: 298 GRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHK------------------------- 332
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
EAM LF+ M L PD S+L +C S +L G Q+H+Y IK ++ V N
Sbjct: 333 ---EAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTN 389
Query: 350 AILQ--------HQAGELFRLFSL--------------MLASQ----------------- 370
+++ +A ++F +F+ L +Q
Sbjct: 390 SLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRL 449
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+P +TF ++ A A++ SL + Q+H + K GL LD+F + L+ +Y C L +R
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSR 509
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
+F+ M+ D+V W+S+ GY Q EEAL LF ++ S RP+ T V ++TA ++
Sbjct: 510 LVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLA 569
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
++ G Q + + G+ + ++D+ A+ G +A + A D+V W S+
Sbjct: 570 SLQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSV 627
Query: 551 LASCKTHGNVDVGKRAAENILKI 573
++S HG G++A + + K+
Sbjct: 628 ISSYANHGE---GRKALQMLEKM 647
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 235/495 (47%), Gaps = 76/495 (15%)
Query: 102 VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQ 161
VH I+ S + D L N ++N+Y + G + AR VF++MP+RN+V+W+ M++ C+ +G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 162 ENAAIELYVQMLQSGL-MPDQFTFGSIIRACSGLCCVGLGR----QLHAHVIKSEHGSHL 216
++ +++ ++ P+++ S I+ACSGL G GR QL + ++KS +
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLD--GSGRWMVFQLQSFLVKSRFDRDV 183
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
LI Y K I A VF ++ K +W +MI G K+
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKM---------------- 227
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
+ ++ LF ++ + ++PDG + ++L AC+ L G QIH++I
Sbjct: 228 ------------GRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Query: 337 IKKGFYSNVPVCNAILQ--------HQAGELF---------------------------- 360
++ G + + N ++ A +LF
Sbjct: 276 LRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAM 335
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
LF+ M KPD + ++ +CA++ +LE GTQ+H Y +K L D +V N L+DMY
Sbjct: 336 ELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE---ALKLFRRMRSSGVRPNHV 477
KC L AR++F+ DVV ++++I GY++ G E AL +F MR +RP+ +
Sbjct: 396 AKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLL 455
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T V +L A + + + Q++ +M ++G+ S ++ + + + ++ ++
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLM-FKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDE 514
Query: 538 MAFDDDIVVWKSLLA 552
M D+V+W S+ +
Sbjct: 515 MKV-KDLVIWNSMFS 528
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H I+ +GL LD ++ N LM++Y + G + AR++F M + ++V+WS+++ G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 457 GEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EE+L +F R+ PN L + ACS GL +G + + Q + ++ +R R
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACS--GL--DGSGRWMVFQLQSFLVKSRFDR 181
Query: 516 -----SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++D + G + A + + + V W ++++ C G
Sbjct: 182 DVYVGTLLIDFYLKEGNIDYARLVFDALP-EKSTVTWTTMISGCVKMG 228
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 332/615 (53%), Gaps = 71/615 (11%)
Query: 50 LFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHI 106
LFS +++ EA+ F D + + IRP+ ++ +I+ C+ L GRK+H ++
Sbjct: 82 LFSCYVHSDMHGEAVSLFHDMVLSG----IRPNEFSLSSMINVCTGLEDSVQGRKIHGYL 137
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ DA N +++MY K G LEDA VFDE+ + ++VSW A+IAGC + + A+
Sbjct: 138 IKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRAL 197
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
EL +M +SG+ P+ FT S ++AC+G+ LGRQLH+ +IK + GS LI MY
Sbjct: 198 ELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMY 257
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
+K + +D AR VF M ++ +WN +I+G +
Sbjct: 258 SKCN----------------------------SMDDARLVFKLMPERDMIAWNAVISGHS 289
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF----- 341
EA SLF M + + T+ ++L + + + Y QIH+ +K GF
Sbjct: 290 QNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNY 349
Query: 342 ---------------------YSNVPVCNAIL----------QHQAGELFRLFSLMLASQ 370
+ P+ + +L Q E RL+ M
Sbjct: 350 VVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRG 409
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
KPD + ++ ACA++++ E G Q+H +I+K G D+F N L++MY KCGS+ A
Sbjct: 410 IKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDAS 469
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
F+ + +VSWS++I G AQ G G+EAL+LF++M GV PNH+TLV VL AC+H G
Sbjct: 470 CAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAG 529
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
LV E + M+ +GI P +E +C++DLL RAG++ A + +N+M F + +VW +L
Sbjct: 530 LVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGAL 589
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L + + H N+D+G++AAE +L ++P S VLL NIYAS G W++VAR+ MK+ V+
Sbjct: 590 LGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVK 649
Query: 611 KVPGQSWIEIQTKIH 625
K PG SW+E++ K++
Sbjct: 650 KEPGMSWLEVKDKVY 664
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 254/561 (45%), Gaps = 67/561 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+ ++ AC+ + L LG++VH ++ + D + N ++ +Y KCG DAR +FD +
Sbjct: 12 AFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAI 71
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+VVSW A+ + + A+ L+ M+ SG+ P++F+ S+I C+GL GR
Sbjct: 72 PDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGR 131
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++H ++IK + S S NAL+ MY K + DA +VF IA+ DI
Sbjct: 132 KIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV------------- 178
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
SWN IIAG + A+ L EM + P+ T+ S L AC
Sbjct: 179 ---------------SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACA 223
Query: 322 SPLSLYQGMQIHSYIIKK----------GFYSNVPVCNAI-------------------- 351
G Q+HS +IK G CN++
Sbjct: 224 GMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNA 283
Query: 352 ------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ E LF LM + T + V+ + AA+ + M Q+H +K+G
Sbjct: 284 VISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSG 343
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
D +V+N L+D Y KCG + A +F D+V ++SL+ YAQ G GEEAL+L+
Sbjct: 344 FEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYL 403
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M+ G++P+ +L AC+ + E+G Q++ + ++G + + +V++ A+
Sbjct: 404 EMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVH-VHILKFGFMSDIFAGNSLVNMYAKC 462
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLL 584
G + +A +++ IV W +++ HG + + +LK+ P N LV +
Sbjct: 463 GSIEDASCAFSRIPV-RGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSV 521
Query: 585 CNIYASSGKWEEVARLMGSMK 605
+G E SMK
Sbjct: 522 LCACNHAGLVAEAKHYFNSMK 542
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 217/507 (42%), Gaps = 104/507 (20%)
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ ++F F S+++AC+ + LG+Q+H V+ + S N+L+ +Y K DA
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
++F +I + + SW ++ F+ V ++M EA+
Sbjct: 65 RSLFDAIPDRSVVSWNAL--------FSCYVHSDMH--------------------GEAV 96
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--- 352
SLF +M + P+ ++ S++ CT QG +IH Y+IK G+ S+ NA++
Sbjct: 97 SLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMY 156
Query: 353 ------------------------------------QHQAGELFRLFSLMLASQTKPDHI 376
H+A EL R M S P+
Sbjct: 157 AKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLR---EMNKSGMCPNMF 213
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T + + ACA MA E+G QLH ++K + D F+ GL+DMY KC S+ AR +F M
Sbjct: 214 TLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLM 273
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS--------- 487
+ D+++W+++I G++Q EEA LF M + G+ N TL VL + +
Sbjct: 274 PERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCR 333
Query: 488 --HVGLVEEGLQLYRIMQNE----YGIIPTRE------RRSCVVDLL---------ARAG 526
H ++ G + + N YG E S +VDL+ A+ G
Sbjct: 334 QIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDG 393
Query: 527 RVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALV 582
+ EA +M D V SLL +C + + GK+ +ILK ++ A
Sbjct: 394 QGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGN 453
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGV 609
L N+YA G E+ + + RG+
Sbjct: 454 SLVNMYAKCGSIEDASCAFSRIPVRGI 480
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/618 (33%), Positives = 335/618 (54%), Gaps = 73/618 (11%)
Query: 51 FSSLCKQNLYNEALVAFDFLQNNTNFRI-----RPSTYADLISACSSLRSLQLGRKVHDH 105
LC+ EAL DFLQ ++ + R L+ AC + +++GR++H+
Sbjct: 74 IKKLCESGNLKEAL---DFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEM 130
Query: 106 I-LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ S++ D VL+ I+ MY CGS D+RMVFD++ ++N+ W A+++ ++N
Sbjct: 131 VSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFED 190
Query: 165 AIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A+ ++ +++ + PD FT +I+AC+GL +GLG+ +H K + S + NALI
Sbjct: 191 AMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALI 250
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
AMY K + +A + VF+ M++ ++SWN ++
Sbjct: 251 AMYGKCGLVEEA---------------------------VKRVFDLMDTKTVSSWNALLC 283
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G A S+ +A+ L+ +M D L PD T+ SLL AC+ SL+ G +IH + ++ G
Sbjct: 284 GYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAV 343
Query: 344 NV---------------PVCNAIL----QHQA-----------------GELFRLFSLML 367
+ P +L +H++ E LF ML
Sbjct: 344 DPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQML 403
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ +P I V GAC+ +++L +G +LHC+ +K L D+FV + ++DMY K G +G
Sbjct: 404 SDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIG 463
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++ +F+ + + DV SW+ +I GY G G+EAL+LF +M G++P+ T G+L ACS
Sbjct: 464 LSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS 523
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLVE+GL+ + M N + I P E +CVVD+L RAGR+ +A I +M D D +W
Sbjct: 524 HAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIW 583
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
SLL+SC+ HGN+ +G++ A +L+++P VL+ N++A SGKW++V R+ G MK+
Sbjct: 584 SSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDI 643
Query: 608 GVRKVPGQSWIEIQTKIH 625
G++K G SWIE+ K+H
Sbjct: 644 GLQKDAGCSWIEVGGKVH 661
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 209/480 (43%), Gaps = 17/480 (3%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ +C + V D R+ W+ + S+ + L+ +A+ F L + T +
Sbjct: 151 YSMCGSPSDSRMVFDKLRRKNLFQWN-AIVSAYTRNELFEDAMSIFSELISVTEHKPDNF 209
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA-RMVFDE 140
T +I AC+ L L LG+ +H D + N ++ MYGKCG +E+A + VFD
Sbjct: 210 TLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDL 269
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M + V SW A++ G +QN A++LY+QM SGL PD FT GS++ ACS + + G
Sbjct: 270 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 329
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
++H +++ +L+++Y + A +F + + + SW MI G+S+
Sbjct: 330 EEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN 389
Query: 260 --LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG----DRELIPDGLTV 313
D A +F +M S + + I V + A+ L E+ L D
Sbjct: 390 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 449
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTK 372
S++ + +I + +K S NV + + + E LF ML K
Sbjct: 450 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 509
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARE 431
PD TF ++ AC+ +E G + ++ + + ++DM + G + A
Sbjct: 510 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 569
Query: 432 LFNFME-DPDVVSWSSLIVG---YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
L M DPD WSSL+ + G GE+ + +P + L+ L A S
Sbjct: 570 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE--KPENYVLISNLFAGS 627
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 215/655 (32%), Positives = 334/655 (50%), Gaps = 109/655 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T++ ++ ACS + LG +VH + + D V + +++MY KC L+ A +F E
Sbjct: 139 ATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFRE 198
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RN+V W+A+IAG QN + ++L+ ML+ G+ Q T+ S+ R+C+GL LG
Sbjct: 199 MPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLG 258
Query: 201 RQLHAHVIKSEHGSHLI-------------------------------SQNALIAMYTKF 229
QLH H +KS+ I S NA+I Y +
Sbjct: 259 TQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQ 318
Query: 230 DRILDAWNVFSSIARK---------------------------------------DITSW 250
D+ L A +F S+ R +I
Sbjct: 319 DQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVA 378
Query: 251 GSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+++D + K L A T+F++ME + SWN IIA + +SLF M +
Sbjct: 379 NTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTME 438
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------- 352
PD T S++ AC +L GM+IH I+K G + V +A++
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 353 ---------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
Q Q+ R FS ML PD+ T+ V+ CA MA++
Sbjct: 499 HDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATI 558
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E+G Q+H I+K L DV++ + L+DMY KCG++ +R +F D V+WS++I Y
Sbjct: 559 ELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAY 618
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G GE+A+KLF M+ V+PNH + VL AC+H+G V++GL ++IMQ+ YG+ P
Sbjct: 619 AYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPH 678
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E SC+VDLL R+ +V+EA I M F+ D V+W++LL++CK GNV+V ++A ++L
Sbjct: 679 MEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL 738
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++DP +S+A VLL N+YA+ G W EVA++ MK ++K PG SWIE++ ++H
Sbjct: 739 QLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHT 793
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 244/534 (45%), Gaps = 47/534 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQP---------------------------- 113
T++ ++ CS+L++L G++ H ++ + P
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 114 ---DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
D + N ++ Y + G++ A+ +FD MP+R+VVSW ++++ NG +IE++V
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M + D TF +++ACSG+ GLG Q+H I+ + +++ +AL+ MY+K
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVAS 287
++ A+ +F + +++ W ++I G+ + D +F +M + + A V
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 288 CSNANEAMSLFSEMGDRELIPD-------GLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
A L +++ L D G + C ++ ++
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQS 307
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ N + Q Q + +F + + D I+ + + AC+ + G QLH
Sbjct: 308 Y--NAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K GL ++ V N ++DMY KCG+L A +F+ ME D VSW+++I + Q +
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKT 425
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVV 519
L LF M S + P+ T V+ AC+ + G++++ RI+++ G+ S +V
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGL--DWFVGSALV 483
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
D+ + G + EAE +++ + V W S+++ + + +R +L++
Sbjct: 484 DMYGKCGMLMEAEKIHDRLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEM 536
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 201/412 (48%), Gaps = 41/412 (9%)
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+FTF I++ CS L + G+Q HA +I + + N L+ Y K + A+ VF
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 241 SIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+ +D+ SW +MI G+++ + FA+++F+ M ++ SWN++++ +++ +
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG 357
F M ++ D T +L AC+ G+Q+H I+ GF ++V +A++ +
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 358 ------------------------------------ELFRLFSLMLASQTKPDHITFNDV 381
E +LF ML T+ V
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+CA +++ ++GTQLH + +K+ A D + +DMY KC + A ++FN + +P
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
S++++IVGYA+ G +AL++F+ ++ + + + ++L G LTACS + EG+QL+ +
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ G+ + ++D+ + G + EA + M D V W +++A+
Sbjct: 366 AV-KCGLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAA 415
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/573 (36%), Positives = 310/573 (54%), Gaps = 76/573 (13%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
L+ A+ A DF+ N +F A +SAC++ + + G +VH + S D +
Sbjct: 878 LFLAAMHADDFVLNAYSF-------ASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIG 930
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
+ +L+MY KC E+AR VF+ MP+RN+VSW ++I QNG A+ L+V M+++G +
Sbjct: 931 SALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFV 990
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWN 237
PD+ T S++ AC+GL GRQ+HA V+KS+ ++ NAL+ MY K R
Sbjct: 991 PDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRT----- 1045
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
AR VF+ M S ++ S ++I G A +N +A +
Sbjct: 1046 -----------------------RAARCVFDRMASRSVVSETSLITGYARSANVEDAQMV 1082
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG 357
FS+M ++ +I NV + +
Sbjct: 1083 FSQMVEKNVIA----------------------------------WNVLIAAYAQNGEEE 1108
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD------VF 411
E RLF + P H T+ +V+ AC +A L++G Q H +++K G D VF
Sbjct: 1109 EALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVF 1168
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+DMY+K GS+ ++F M D VSW+++IVG+AQ G ++AL LF RM S
Sbjct: 1169 VGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSK 1228
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
P+ VT++GVL+AC H GLVEEG + +R M ++GIIP+++ +C++DLL RAG + E
Sbjct: 1229 ESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEV 1288
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
E+ I +M+ + D V+W SLL SC+ H NV++G+ AA + ++DP NS VLL N+YA
Sbjct: 1289 EELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAEL 1348
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
GKW +V R+ SMK RGV K PG SWIEI K+
Sbjct: 1349 GKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKV 1381
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 170/634 (26%), Positives = 307/634 (48%), Gaps = 44/634 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
++ C + A E+ D R W+ + ++ + +EAL F + N+ R +
Sbjct: 93 ESLAACGSVADARELFDLMPLRDGGSWN-AIITASSRAGHPSEALSLFSNM-NSLGIRPK 150
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+T A ++S C+ L R++H HI Q + +L ++++YG C L DAR FD
Sbjct: 151 DATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFD 210
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
++ + N +SW ++ G + A++++ +ML +G+ P +T + AC +
Sbjct: 211 DILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEE 270
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS- 258
GR +HA V++ + H+ +++++ MY K + A ++F+ KD+ S++ G +
Sbjct: 271 GRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLAS 330
Query: 259 --KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
++ A+ VF M+ NL SWN ++ G + A+ LF +M D +T+ S+
Sbjct: 331 CGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSV 390
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-------QAGELFRLFSL---- 365
L ACT L + +G ++H++ IK GF+S+ + NA+++ ++ E LF +
Sbjct: 391 LSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSER 450
Query: 366 --------------------------MLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ S+ P+ TF+ + ACA + L+ G Q+H
Sbjct: 451 DSYSWNSLISGYERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHA 510
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
Y+++ G +D + + L+DMY KC + +F DV+ W+S+I G A G GE
Sbjct: 511 YMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEY 570
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
L LF M+ G++ + VT +G L +C G V G + +M +E IIP E C++
Sbjct: 571 GLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMI 629
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+LL + G + E EDF+ M F+ +W + C+ +GN +G+RAA+ I +P
Sbjct: 630 ELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPV 689
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
V + ++ G E + S E G ++P
Sbjct: 690 QFVATVDYESNDGGREAESTSFSSEGE-GCEELP 722
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 233/538 (43%), Gaps = 77/538 (14%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+SA + L L R+V D I P+ +N +L+ + + G DAR +F +P +
Sbjct: 801 LVSAYARLGRLPDARRVFDEI----PHPNTFSYNALLSAHARLGRPADARALFHAIPDPD 856
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
S+ A+IA +Q+ + A+ M + + ++F S + AC+ G Q+HA
Sbjct: 857 QCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHA 916
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
V KS H + +AL+ MY K + +A VF ++ ++I SW S+I +
Sbjct: 917 LVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCY-------- 968
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
E P EA+ LF M +PD +T+ S++ AC +
Sbjct: 969 ---EQNGP-----------------VGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAA 1008
Query: 326 LYQGMQIHSYIIKKG-FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G Q+H+ ++K F ++ + NA++ A +T+ F+
Sbjct: 1009 DREGRQVHARVVKSDRFREDMVLSNALVDMYAK----------CGRTRAARCVFDR---- 1054
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
MAS + ++ L+ Y + ++ A+ +F+ M + +V++W
Sbjct: 1055 ---MASRSVVSE-----------------TSLITGYARSANVEDAQMVFSQMVEKNVIAW 1094
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ-----LY 499
+ LI YAQ G EEAL+LF R++ V P H T VL AC +V ++ G Q L
Sbjct: 1095 NVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLK 1154
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++G + +VD+ + G + + +MA D+ V W +++ +G
Sbjct: 1155 EGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDN-VSWNAMIVGHAQNGR 1213
Query: 560 VDVGKRAAENIL-KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE-RGVRKVPGQ 615
E +L + +S ++ + + SG EE R SM E G+ +P Q
Sbjct: 1214 AKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGI--IPSQ 1269
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 229/518 (44%), Gaps = 75/518 (14%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQP-------DAVLHNHILNMYGKCGSLEDAR 135
YA L+ +S SL R++ H+ +S L N + CGS+ DAR
Sbjct: 46 YASLLRLATSHGSLSAARRIATHLAASSSASSTSRSSVPTFLFNRAIESLAACGSVADAR 105
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD MP R+ SW A+I S+ G + A+ L+ M G+ P T S++ C+
Sbjct: 106 ELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECL 165
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ RQLH H+ K + S++I AL+ +Y + D
Sbjct: 166 DLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD--------------------- 204
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
AR F+++ PN SWN I+ + A+ +F M + P G TV
Sbjct: 205 -------ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSH 257
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDH 375
+ AC +L +G IH+++++ G+ +V V ++++ +++ M A+Q+
Sbjct: 258 AVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVV-----DMYAKCGAMDAAQS---- 308
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
FN A M + M T + +GLA CG + A+ +F
Sbjct: 309 -LFN-----LAPMKDMVMSTSI-----VSGLA--------------SCGRIADAKRVFEG 343
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M++ ++VSW++++ GY + AL LF++MR + +TL VL+AC+ + + +G
Sbjct: 344 MKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKG 403
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED-FINQMAFDDDIVVWKSLLASC 554
+++ + G + ++ +V + ++ G + AE + +M + D W SL++
Sbjct: 404 EEVH-AFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGY 462
Query: 555 KTHGNVDVGKRAAENIL-KIDP---TNSAALVLLCNIY 588
+ H + A + ++ P T S+AL NI+
Sbjct: 463 ERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANIF 500
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/642 (32%), Positives = 338/642 (52%), Gaps = 70/642 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C L +A E+ + +R W+ + + ++ EA+ + +Q+ ++P
Sbjct: 375 YARCGDLPKARELFYTMPKRDLISWN-AIIAGYARREDRGEAMRLYKQMQSEG---VKPG 430
Query: 82 --TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ L+SAC++ + G+ +H+ IL S + + L N ++NMY +CGSL +A+ VF+
Sbjct: 431 RVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFE 490
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
R+V+SW +MIAG +Q+G A +L+ +M L PD TF S++ C + L
Sbjct: 491 GTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+Q+H + +S + NALI MY + + DA NVF S+ +D+
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVM----------- 599
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
SW +I G A +A+ LF +M + P T S+L
Sbjct: 600 -----------------SWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKV 642
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
CTS L +G ++ +YI+ G+ + V NA++
Sbjct: 643 CTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSW 702
Query: 353 --------QHQAGELFRLFSLMLASQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q+ G+ F+ + Q P+ +F ++ AC++ ++LE G ++H I+K
Sbjct: 703 NKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVK 762
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
L DV V L+ MY KCGS G A+E+F+ + + +VV+W+++I YAQ G +AL
Sbjct: 763 RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGF 822
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M G++P+ T +L+AC+H GLV EG Q++ M++EYG++PT E C+V LL
Sbjct: 823 FNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 882
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RA R EAE INQM F D VW++LL +C+ HGN+ + + AA N LK++ N A +L
Sbjct: 883 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 942
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N+YA++G+W++VA++ M+ RG+RK PG+SWIE+ IH
Sbjct: 943 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIH 984
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 161/571 (28%), Positives = 270/571 (47%), Gaps = 83/571 (14%)
Query: 35 VDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
VDS + F D D L ++L + EA + + + + +TY +++
Sbjct: 280 VDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQY-YRMRSDGVALNRTTYLSILN 338
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
ACS+ ++L+ G+ +H HI D + N +++MY +CG L AR +F MP+R+++S
Sbjct: 339 ACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLIS 398
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W A+IAG ++ A+ LY QM G+ P + TF ++ AC+ G+ +H ++
Sbjct: 399 WNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
+S S+ NAL+ MY + +++A NVF +D+ SW SM
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSM--------------- 503
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
IAG A + A LF EM + EL PD +T S+L C +P +L
Sbjct: 504 -------------IAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550
Query: 329 GMQIHSYIIKKGFYSNVPVCNAI-------------------LQHQ-------------- 355
G QIH I + G +V + NA+ LQH+
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD 610
Query: 356 AGELFRLFSLMLASQT---KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
GE + L Q +P TF+ ++ C + A L+ G ++ YI+ +G LD V
Sbjct: 611 QGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGV 670
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ Y K GS+ ARE+F+ M D+VSW+ +I GYAQ G G+ A++ +M+ V
Sbjct: 671 GNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDV 730
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLY-----RIMQNEYGIIPTRERRSCVVDLLARAGR 527
PN + V +L ACS +EEG +++ R +Q + + + ++ + A+ G
Sbjct: 731 VPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRV------GAALISMYAKCGS 784
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
EA++ + + + ++V W +++ + HG
Sbjct: 785 QGEAQEVFDNI-IEKNVVTWNAMINAYAQHG 814
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 271/536 (50%), Gaps = 70/536 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+TY L+ C+ R L +++H ++ + PD L N ++NMY KC S+ DA VF E
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+R+V+SW ++I+ +Q G + A +L+ +M +G +P++ T+ SI+ AC + G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+++H+ +IK+ + QN+L++MY K + A VF+ I+ +D+ S+ +M+ +++
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ + E + LF +M + PD +T +LL A
Sbjct: 208 AYVK----------------------------ECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
T+P L +G +IH +++G S++ V A++
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYN 299
Query: 353 -------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
QH E F + M + + T+ ++ AC+ +LE G +H +I +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + DV + N L+ MY +CG L ARELF M D++SW+++I GYA+ EA++L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLA 523
++M+S GV+P VT + +L+AC++ +G ++ I+++ GI + ++++
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMNMYR 477
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL--KIDPTN 577
R G + EA++ + D++ W S++A HG+ + + + + +++P N
Sbjct: 478 RCGSLMEAQNVF-EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/571 (26%), Positives = 261/571 (45%), Gaps = 70/571 (12%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C + A +V RR W+ L S +Q +A F+ +QN F TY
Sbjct: 75 CRSVLDAHQVFKEMPRRDVISWN-SLISCYAQQGFKKKAFQLFEEMQN-AGFIPNKITYI 132
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC S L+ G+K+H I+ + Q D + N +L+MYGKCG L AR VF + R
Sbjct: 133 SILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR 192
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+VVS+ M+ +Q + L+ QM G+ PD+ T+ +++ A + + G+++H
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIH 252
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
++ S + AL+ M + + A F A +D+
Sbjct: 253 KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVV---------------- 296
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+N +IA +A + EA + M + + T S+L AC++
Sbjct: 297 ------------VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSK 344
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------------------- 356
+L G IHS+I + G S+V + NA++ A
Sbjct: 345 ALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIA 404
Query: 357 --------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
GE RL+ M + KP +TF ++ ACA ++ G +H I+++G+
Sbjct: 405 GYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKS 464
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ + N LM+MY +CGSL A+ +F + DV+SW+S+I G+AQ G E A KLF+ M+
Sbjct: 465 NGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQ 524
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGR 527
+ + P+++T VL+ C + +E G Q++ RI E G+ + ++++ R G
Sbjct: 525 NEELEPDNITFASVLSGCKNPEALELGKQIHGRI--TESGLQLDVNLGNALINMYIRCGS 582
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +A + + + D++ W +++ C G
Sbjct: 583 LQDARNVFHSLQH-RDVMSWTAMIGGCADQG 612
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 188/409 (45%), Gaps = 66/409 (16%)
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
++ T+ ++++ C+ + +++HA ++++ G + N LI MY K +LDA VF
Sbjct: 26 ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ R+D+ SW S+I +++ F + F LF
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQ----------------------------LFE 117
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAG 357
EM + IP+ +T S+L AC SP L G +IHS IIK G+ + V N++L + G
Sbjct: 118 EMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG 177
Query: 358 ELFR----------------------------------LFSLMLASQTKPDHITFNDVMG 383
+L R LF M + PD +T+ +++
Sbjct: 178 DLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLD 237
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
A + L+ G ++H ++ GL D+ V L+ M V+CG + SA++ F D DVV
Sbjct: 238 AFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVV 297
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
+++LI AQ G EA + + RMRS GV N T + +L ACS +E G +L
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG-KLIHSHI 356
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+E G + + ++ + AR G + +A + M D++ W +++A
Sbjct: 357 SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIA 404
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
F+LF M + P+ IT+ ++ AC + A LE G ++H I+K G D V N L+ M
Sbjct: 113 FQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSM 172
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KCG L AR++F + DVVS+++++ YAQ +E L LF +M S G+ P+ VT
Sbjct: 173 YGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTY 232
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+ +L A + +++EG +++++ E
Sbjct: 233 INLLDAFTTPSMLDEGKRIHKLTVEE---------------------------------G 259
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
+ DI V +L+ C G+VD K+A + D AL+
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALI 302
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 37/252 (14%)
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
T+ + T+ ++ C L ++H +++ + D+F+ N L++MYVKC S+ A
Sbjct: 23 TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
++F M DV+SW+SLI YAQ G ++A +LF M+++G PN +T + +LTAC
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 491 LVEEGLQLY-RIMQNEYGIIP----------------TRERR-------------SCVVD 520
+E G +++ +I++ Y P R R+ + ++
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 521 LLARAGRVHEAEDFINQMA---FDDDIVVWKSLLASCKTHGNVDVGKR----AAENILKI 573
L A+ V E QM+ D V + +LL + T +D GKR E L
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Query: 574 DPTNSAALVLLC 585
D ALV +C
Sbjct: 263 DIRVGTALVTMC 274
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/585 (33%), Positives = 331/585 (56%), Gaps = 51/585 (8%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR- 144
L+ SS++S +++H IL + P L + IL++Y L D+ ++F+ +P
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSL-PSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPP 69
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
++W ++I + +G ++ ++QML SG PD F S++++C+ + + G +H
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK----- 259
+I+ G L + NAL+ MY+KF W++ K + G D +SK
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKF------WSLEEVNTYKKVFDEGKTSDVYSKKEKES 183
Query: 260 --LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
L R VF M ++ SWNT+I+G A +A+ + EMG+ +L PD T+ S+L
Sbjct: 184 YYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------QH--- 354
++L +G +IH Y I+ G+ ++V + ++++ QH
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303
Query: 355 ----------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
Q G E + F ML ++ KP+H++F+ +M ACA + +L +G QLH YI
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+++ +VF+ + L+DMY KCG++ +AR +F+ ME D+VSW+++I+GYA G +A+
Sbjct: 364 IRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAI 423
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF+RM GV+PN+V + VLTACSH GLV+E + + M +Y IIP E + V DL
Sbjct: 424 SLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADL 483
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L R GR+ EA +FI+ M + VW +LLA+C+ H N+++ ++ ++ + +DP N A
Sbjct: 484 LGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAY 543
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIY+++G+W++ +L +M+++G++K P SWIEI+ K+HA
Sbjct: 544 VLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHA 588
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 129/244 (52%), Gaps = 8/244 (3%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N + R T + ++ + +L G+++H + + + D + + +++MY KC ++
Sbjct: 229 NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVD 288
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
D+ VF +PQ + +SW ++IAGC QNG + ++ + QML + + P+ +F SI+ AC+
Sbjct: 289 DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACA 348
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L + LG+QLH ++I+S ++ +AL+ MY K I A +F + D+ SW +
Sbjct: 349 HLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTA 408
Query: 253 MIDGFSKLDFAR---TVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMG-DR 304
MI G++ A ++F ME PN ++ ++ + +EA F+ M D
Sbjct: 409 MIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDY 468
Query: 305 ELIP 308
+IP
Sbjct: 469 RIIP 472
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 321/599 (53%), Gaps = 67/599 (11%)
Query: 65 VAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
V+ + + P Y + ++SACS L L+ G+++H ++L + D + N ++
Sbjct: 121 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLI 180
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+ Y KC ++ R +FD+M +N++SWT MI+G QN + A++L+ +M + G PD F
Sbjct: 181 DFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGF 240
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
S++ +C L + GRQ+HA+ IK+ S+ +N LI MY K + + DA
Sbjct: 241 ACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDA------- 293
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+ VF+ M N+ S+N +I G +S +EA+ LF EM
Sbjct: 294 ---------------------KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR 332
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------YS------ 343
R P LT SLL S +L QIH IIK G YS
Sbjct: 333 VRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVK 392
Query: 344 ------------NVPVCNAIL----QH-QAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
++ V NA+ QH + E +L+S + S+ KP+ TF ++ A +
Sbjct: 393 DARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAAS 452
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ASL G Q H ++K GL FV N L+DMY KCGS+ AR++FN DVV W+S
Sbjct: 453 NLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNS 512
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I +AQ G EEAL +FR M G++PN+VT V VL+ACSH G VE+GL + M +
Sbjct: 513 MISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-F 571
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
GI P E +CVV LL R+G++ EA++FI +M + +VW+SLL++C+ GNV++GK A
Sbjct: 572 GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYA 631
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
AE + DP +S + +LL NI+AS G W +V ++ M V K PG+SWIE+ K++
Sbjct: 632 AEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVN 690
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/591 (28%), Positives = 281/591 (47%), Gaps = 71/591 (12%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EAL+ F LQ + A +I AC+ L ++ G ++H ++ S D + +
Sbjct: 19 EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 78
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++ Y K G +E AR+VFD++ ++ V+WT +IAG ++ G+ ++EL+ QM ++ ++PD+
Sbjct: 79 IDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDR 138
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
+ S++ ACS L + G+Q+HA+V++ + N LI YTK +R+ +F
Sbjct: 139 YVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ 198
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+ K+I SW +MI G+ + F W EAM LF EM
Sbjct: 199 MVVKNIISWTTMISGYMQNSF--------------DW--------------EAMKLFGEM 230
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------- 352
PDG S+L +C S +L QG Q+H+Y IK SN V N ++
Sbjct: 231 NRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLL 290
Query: 353 ---------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
Q + E LF M P +TF ++G
Sbjct: 291 XDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVS 350
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A++ +LE+ Q+H I+K G++LD+F + L+D+Y KC + AR +F M + D+V W+
Sbjct: 351 ASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWN 410
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
++ GY Q EEALKL+ ++ S +PN T ++TA S++ + G Q + + +
Sbjct: 411 AMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV-K 469
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
G+ + +VD+ A+ G + EA N + D+V W S++++ HG +
Sbjct: 470 MGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIW-RDVVCWNSMISTHAQHGEAEEALG 528
Query: 566 AAENILK--IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
++K I P N V + + + +G E+ SM G++ PG
Sbjct: 529 MFREMMKEGIQP-NYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIK--PG 576
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 202/606 (33%), Positives = 314/606 (51%), Gaps = 71/606 (11%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
LD+A + S R W+ + S + + EAL F + F + T+A
Sbjct: 101 FLDEADSLFRSMPERDQCTWN-SMVSGFAQHDRCEEALYYFAMMHKE-GFVLNEYTFASG 158
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+SACS L + G ++H I S C D + + +++MY KCG++ DA+ VFDEM RNV
Sbjct: 159 LSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNV 218
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSW ++I QNG A++++ ML+S + PD+ T S+I AC+ L + +G+++HA
Sbjct: 219 VSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHAR 278
Query: 207 VIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
V+K + + +I NA + MY K RI +A R
Sbjct: 279 VVKMDKLRNDIILSNAFVDMYAKCSRIKEA----------------------------RF 310
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+F+ M N+ + ++++G A ++ A +F++M +R ++
Sbjct: 311 IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVS----------------- 353
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
N + + E LF L+ P H TF +++ AC
Sbjct: 354 -----------------WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKAC 396
Query: 386 AAMASLEMGTQLHCYIMKTGLAL------DVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
A +A L +G Q H +++K G D+FV N L+DMYVKCG + +F M +
Sbjct: 397 ADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D VSW+++I+G+AQ G G EAL+LFR M SG +P+H+T++GVL+AC H G VEEG +
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M ++G+ P R+ +C+VDLL RAG + EA+ I +M D V+W SLLA+CK H N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRN 576
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+ +GK AE + +++ +NS VLL N+YA GKW + + M++ GV K PG SWI+
Sbjct: 577 ITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIK 636
Query: 620 IQTKIH 625
I H
Sbjct: 637 IPGHAH 642
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 227/516 (43%), Gaps = 101/516 (19%)
Query: 81 STYADLISACSSLRSLQLG-RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
S +A L+ +C L+ + R VH ++ S + + N +++ Y KCGSLED R +FD
Sbjct: 20 SPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFD 79
Query: 140 EMPQRNVVSWTA-------------------------------MIAGCSQNGQENAAIEL 168
+MPQRNV +W + M++G +Q+ + A+
Sbjct: 80 KMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYY 139
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ M + G + +++TF S + ACSGL + G Q+H+ + KS S + +AL+ MY+K
Sbjct: 140 FAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSK 199
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ DA VF + +++ SW S+I + E P
Sbjct: 200 CGNVNDAQQVFDEMGDRNVVSWNSLITCY-----------EQNGP--------------- 233
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK-KGFYSNVPV 347
A EA+ +F M + + PD +T+ S++ AC S ++ G ++H+ ++K +++ +
Sbjct: 234 --AVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIIL 291
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
NA F D+ C+ + +I +
Sbjct: 292 SNA---------------------------FVDMYAKCSRIKEAR-------FIFDSMPI 317
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+V ++ Y S +AR +F M + +VVSW++LI GY Q G EEAL LF +
Sbjct: 318 RNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERR----SCVVDLL 522
+ V P H T +L AC+ + + G+Q + ++++ + E + ++D+
Sbjct: 378 KRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G V E +M + D V W +++ +G
Sbjct: 438 VKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNG 472
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 215/645 (33%), Positives = 336/645 (52%), Gaps = 70/645 (10%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSL 93
FD + D D L S C++ ++ E++ D + P +T+A L+ +CS+L
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESV---DLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
L LG +VH + + + D + +++MYGKC SL+DA F MP+RN VSW + I
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAI 222
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AGC QN Q +EL+++M + GL Q ++ S R+C+ + C+ GRQLHAH IK++
Sbjct: 223 AGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---------------- 257
S + A++ +Y K + + DA F + + + +M+ G
Sbjct: 283 SDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSG 342
Query: 258 -----------------------SKLDF---------ARTVFNEMESPNLASWNTIIAGV 285
S LD A +F M+ + SWN IIA +
Sbjct: 343 VFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAAL 402
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGL---TVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
+ ++ + F+EM L D TV + C C + + ++H I +
Sbjct: 403 EQNGHYDDTILHFNEM----LRFDAFVASTVVDMYCKCGI---IDEAQKLHDRIGGQQVV 455
Query: 343 S-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
S N + L ++ + FS ML KPDH TF V+ CA +A++E+G Q+H I
Sbjct: 456 SWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQI 515
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K + D ++ + L+DMY KCG + + +F +E D VSW+++I GYA G G EAL
Sbjct: 516 IKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEAL 575
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
++F RM+ V PNH T V VL ACSHVGL ++G + + +M Y + P E +C+VD+
Sbjct: 576 RMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDI 635
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L R+ EA FIN M F D V+WK+LL+ CK +V++ + AA N+L +DP +S+
Sbjct: 636 LGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVY 695
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+LL N+YA SGKW +V+R +K+ ++K PG SWIE Q+++H
Sbjct: 696 ILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEAQSEMHG 740
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/519 (24%), Positives = 217/519 (41%), Gaps = 105/519 (20%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D V N +L Y G + A +FD MP +VVSW A+++G Q G +++L+V+M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ G+ PD+ TF ++++CS L + LG Q+HA +K+ + + +AL+ MY K +
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
DA F + ++ SWGS IAG
Sbjct: 202 DALCFFYGMPERNWVSWGSA----------------------------IAGCVQNEQYVR 233
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
+ LF EM L + S +C + L G Q+H++ IK F S+ V AI+
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVD 293
Query: 354 HQAG-----ELFRLFS-----------------LMLASQTKPDHITFNDVMGACAAMASL 391
A + R F M+ S + D ++ + V ACA
Sbjct: 294 VYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGY 353
Query: 392 EMGTQLHCYIMKTGLAL------------------------------------------- 408
G Q+HC +K+ L L
Sbjct: 354 FPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTIL 413
Query: 409 --------DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
D FV + ++DMY KCG + A++L + + VVSW++++ G++ E A
Sbjct: 414 HFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAA 473
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVV 519
K F M G++P+H T VL C+++ +E G Q++ +I++ E ++ S +V
Sbjct: 474 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE--MLDDEYISSTLV 531
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
D+ A+ G + ++ + + D V W +++ HG
Sbjct: 532 DMYAKCGDMPDSL-LVFEKVEKRDFVSWNAMICGYALHG 569
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 193/463 (41%), Gaps = 71/463 (15%)
Query: 179 PDQFTFGSIIRACS--GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
P + TF + ++C+ G + GR HA ++ S N L+ MY + A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 237 NVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
VF ++ R+D SW +M+ +S + A +F+ M P++ SWN +++G E
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG------------- 340
++ LF EM R + PD T LL +C++ L G+Q+H+ +K G
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 341 -------------FYSNVP----------VCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
F+ +P + + Q LF M +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ +CAAM+ L G QLH + +K + D V ++D+Y K SL AR F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ V + ++++VG LF M S +R + V+L GV +AC+ G Q
Sbjct: 313 NHTVETSNAMMVG------------LF--MIRSSIRFDVVSLSGVFSACAETKGYFPGQQ 358
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ + V+DL + + EA I Q D V W +++A+ + +
Sbjct: 359 VHCLAIKS------------VLDLYGKCKALMEAY-LIFQGMKQKDSVSWNAIIAALEQN 405
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARL 600
G+ D +L+ D ++ +V ++Y G +E +L
Sbjct: 406 GHYDDTILHFNEMLRFDAFVASTVV---DMYCKCGIIDEAQKL 445
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 100/175 (57%), Gaps = 6/175 (3%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++D+A ++ D + W+ + L +L E+ A F + ++
Sbjct: 431 DMYCKCGIIDEAQKLHDRIGGQQVVSWN----AILSGFSLNKESEAAQKFFSEMLDMGLK 486
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T+A ++ C++L +++LG+++H I+ + D + + +++MY KCG + D+ +V
Sbjct: 487 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 546
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
F+++ +R+ VSW AMI G + +G A+ ++ +M + ++P+ TF +++RACS
Sbjct: 547 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACS 601
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 208/613 (33%), Positives = 331/613 (53%), Gaps = 72/613 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T+A ++ +CSSL G ++H + D V + +L+MY KC L+ + F
Sbjct: 175 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHS 234
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP++N VSW+A+IAGC QN +EL+ +M ++G+ Q TF S+ R+C+GL + LG
Sbjct: 235 MPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG 294
Query: 201 RQLHAHVIKSEHGSHLI-------------------------------SQNALIAMYTKF 229
QLH H +K++ G+ ++ S NA+I Y +
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354
Query: 230 DRILDAWNV-------------------------FSSIARKDITSWGSMIDGFSK---LD 261
D+ L V S+ + +I +++D + K L
Sbjct: 355 DKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALV 414
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF-------SEMGDRELIPDGLTVR 314
A VF EM S + SWN IIA N + +SLF S +G + G+ +
Sbjct: 415 EACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFV--GIALI 472
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKP 373
+ C + + ++H + ++ S N + LQ Q+ E + FS ML P
Sbjct: 473 DMYSKCGM---MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 529
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D+ T+ ++ CA + ++E+G Q+H I+K L D ++ + L+DMY KCG++ + +F
Sbjct: 530 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 589
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ D V+W++++ GYAQ G GEEALK+F M+ V+PNH T + VL AC H+GLVE
Sbjct: 590 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 649
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+GL + M + YG+ P E SCVVD++ R+G+V +A + I M F+ D V+W++LL+
Sbjct: 650 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSI 709
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
CK HGNV+V ++AA +IL+++P +SAA VLL NIYA++G W EV +L M+ G++K P
Sbjct: 710 CKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEP 769
Query: 614 GQSWIEIQTKIHA 626
G SWIEI++++HA
Sbjct: 770 GCSWIEIKSEVHA 782
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/575 (25%), Positives = 255/575 (44%), Gaps = 99/575 (17%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ T++ + CS ++L G++ H ++ ++ +P + N ++ MY KC LE A VF
Sbjct: 41 KKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVF 100
Query: 139 DEMPQR-------------------------------NVVSWTAMIAGCSQNGQENAAIE 167
D MPQR +VVSW ++I+G NG I+
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
+++QM + G + D+ TF ++++CS L G G Q+H +K +++ +AL+ MY
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR---TVFNEMESPNLASWNTIIAG 284
K ++ + F S+ K+ SW ++I G + D R +F EM+ + + A
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280
Query: 285 V---------------------------------------ASCSNANEAMSLFSEM---- 301
V C+N ++A LF+ +
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340
Query: 302 -------------GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
D+ L D +++ AC +G+Q+H +K SN+ V
Sbjct: 341 LQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 400
Query: 349 NAILQH--QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL--HCYIMKT 404
NAIL + G L L+ D +++N ++ A + E L H I+K+
Sbjct: 401 NAILDMYGKCGALVEA-CLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKS 459
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L LD FV L+DMY KCG + A +L + + + VVSW+++I G++ EEA K F
Sbjct: 460 RLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTF 519
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLA 523
+M GV P++ T +L C+++ VE G Q++ +I++ E + S +VD+ +
Sbjct: 520 SKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYS 577
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + + + I + A + D V W +++ HG
Sbjct: 578 KCGNMQDFQ-LIFEKAPNRDFVTWNAMVCGYAQHG 611
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 217/477 (45%), Gaps = 74/477 (15%)
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TF I + CS + G+Q HA +I +E + N LI MY K + A+ VF +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 243 ARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
++D SW +M+ G++ + A+ +F+ M ++ SWN++I+G + + + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-- 357
+MG + D T +L +C+S G+QIH +K GF +V +A+L A
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 358 ------ELF----------------------------RLFSLMLASQTKPDHITFNDVMG 383
+ F LF M + TF V
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+CA +++L +G+QLH + +KT DV + +DMY+KC +L A++LFN + + ++ S
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV-----GLVEEGLQL 498
++++IVGYA+ G+ + V+L G AC+ + GL GL +
Sbjct: 344 YNAIIVGYAR--------------SDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSM 389
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ Q+ + + ++D+ + G + EA +M D V W +++A+ + +G
Sbjct: 390 KSLCQSNICV------ANAILDMYGKCGALVEACLVFEEMV-SRDAVSWNAIIAAHEQNG 442
Query: 559 NVD------VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
N + + R ++ L +D AL+ ++Y+ G E+ +L + E+ V
Sbjct: 443 NEEKTLSLFIHNRIIKSRLGLDSFVGIALI---DMYSKCGMMEKAEKLHDRLAEQTV 496
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 177/437 (40%), Gaps = 99/437 (22%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
LF+SL NL + + + +++ + + + AC+ ++ G +VH + S
Sbjct: 332 LFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKS 391
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
CQ + + N IL+MYGKCG+L +A +VF+EM R+ VSW A+IA QNG E + L+
Sbjct: 392 LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 451
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ H +IKS G ALI MY+K
Sbjct: 452 I---------------------------------HNRIIKSRLGLDSFVGIALIDMYSKC 478
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ A + +A + + SW ++I GFS
Sbjct: 479 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ----------------------------K 510
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+ EA FS+M + + PD T ++L C + +++ G QIH+ IIKK S+ + +
Sbjct: 511 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 570
Query: 350 AIL-----------------------------------QHQAG-ELFRLFSLMLASQTKP 373
++ QH G E ++F M KP
Sbjct: 571 TLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKP 630
Query: 374 DHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+H TF V+ AC M +E G H + GL + + ++D+ + G + A EL
Sbjct: 631 NHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL 690
Query: 433 FNFME-DPDVVSWSSLI 448
M + D V W +L+
Sbjct: 691 IEGMPFEADAVIWRTLL 707
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
FS A+ TK TF+ + C+ +L G Q H ++ T VFV N L+ MY+K
Sbjct: 32 FSSYQATPTKKK--TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIK 89
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
C L A ++F+ M D VSW++++ GYA G A KLF M V + + G
Sbjct: 90 CSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGY 149
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV---DLLARAGRVHEAEDFINQMA 539
L H +++ LQ+ R+ G + R + V+ L G + +M
Sbjct: 150 LHNGDHRKVIDVFLQMGRM-----GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG 204
Query: 540 FDDDIVVWKSLL---ASCK 555
FD D+V +LL A CK
Sbjct: 205 FDCDVVTGSALLDMYAKCK 223
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 326/622 (52%), Gaps = 76/622 (12%)
Query: 79 RP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDAR 135
RP S YA L+SA + G +H IL + P L NH+L YGK G AR
Sbjct: 3 RPLSSQYAALLSAAARTEPHAAG-ALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARAR 61
Query: 136 MVFDEMP-------------------------------QRNVVSWTAMIAGCSQNGQENA 164
VFD P QR+ VS+ A+IAG S G
Sbjct: 62 RVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHAR 121
Query: 165 AIELYVQMLQSG--LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+ LY +L++G + P + T +++ A S L LGRQ H +++ G + + L
Sbjct: 122 AVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPL 181
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWN 279
+ MY K I DA VF + K++ + +MI G + ++ AR +F M + +W
Sbjct: 182 VGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWT 241
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
T++ G ++A++ F M + + D T S+L AC + +L QG QIH+YII+
Sbjct: 242 TMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301
Query: 340 GFYSNVPVCNAILQH---------------------------------QAG---ELFRLF 363
+ NV V +A++ Q G E R+F
Sbjct: 302 HYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVF 361
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
S M PD T V+ +CA +ASLE G Q HC + +GL + V N L+ +Y KC
Sbjct: 362 SEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKC 421
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
GS+ A LF+ M D VSW++L+ GYAQFG +E + LF +M + V+P+ VT +GVL
Sbjct: 422 GSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVL 481
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
+ACS G VE+G + MQ ++GI+P + +C++DL +R+GR+ EAE+FI QM D
Sbjct: 482 SACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPD 541
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+ W +LL++C+ G++++G+ AAEN+L+IDP N A+ VLLC+++A+ G W +VA+L
Sbjct: 542 AIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRG 601
Query: 604 MKERGVRKVPGQSWIEIQTKIH 625
M++R V+K PG SWI+ + K+H
Sbjct: 602 MRDRQVKKEPGCSWIKYKNKVH 623
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 191/442 (43%), Gaps = 99/442 (22%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RPS T + ++ A S+L LGR+ H IL +A + + ++ MY K G + DA+
Sbjct: 136 VRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAK 195
Query: 136 MVFDEMPQRNVV-------------------------------SWTAMIAGCSQNGQENA 164
VFDEM +NVV +WT M+ G +QNG E+
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A+ + +M G+ DQ+TFGSI+ AC L + G+Q+HA++I++ + ++ +AL+
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY+K I A F ++ K+I SW ++I G+ G
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGY--------------------------G 349
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
CS EA+ +FSEM + PD T+ S++ +C + SL +G Q H + G
Sbjct: 350 QNGCS--EEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHY 407
Query: 345 VPVCNAILQ------------------------------------HQAGELFRLFSLMLA 368
+ V NA++ +A E LF MLA
Sbjct: 408 ITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLA 467
Query: 369 SQTKPDHITFNDVMGACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
KPD +TF V+ AC+ +E G + H G+ ++D+Y + G L
Sbjct: 468 KDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLK 527
Query: 428 SARELFNFME-DPDVVSWSSLI 448
A E M PD + W +L+
Sbjct: 528 EAEEFIKQMPMHPDAIGWGTLL 549
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 175/376 (46%), Gaps = 39/376 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C ++++A + + R W + + + L ++AL F ++ I T+
Sbjct: 219 CKMVEEARRLFEVMTDRDCITWT-TMVTGFTQNGLESQALNFFRRMRFQ-GIAIDQYTFG 276
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC +L +L+ G+++H +I+ + + + + +++MY KC S++ A F M +
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCK 336
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N++SWTA+I G QNG A+ ++ +M + G+ PD FT GS+I +C+ L + G Q H
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFH 396
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ S ++ NAL+ +Y K I DA +F + D SW +++ G+++ F R
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQ--FGR 454
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
A E + LF +M +++ PDG+T +L AC+
Sbjct: 455 --------------------------AKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488
Query: 325 SLYQGMQ-IHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITF 378
+ +G HS G VP+ C L ++G L + PD I +
Sbjct: 489 FVEKGCSYFHSMQKDHGI---VPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGW 545
Query: 379 NDVMGACAAMASLEMG 394
++ AC +E+G
Sbjct: 546 GTLLSACRLRGDMEIG 561
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/655 (32%), Positives = 334/655 (50%), Gaps = 109/655 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T+A ++ AC+ + LG +VH + D V +++MY C L+ A +F E
Sbjct: 171 ATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCE 230
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RN V W+A+IAG +N + ++LY ML G+ Q TF S R+C+GL LG
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 201 RQLHAHVIKSEHGSHLI-------------------------------SQNALIAMYTKF 229
QLHA+ +K+ G I S NALI Y +
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350
Query: 230 DRILDAWNVFSSIARK-----DITSWGSM-----IDGFSK------------LDF----- 262
D++L+A +F S+ + +I+ G++ I G+ + LDF
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA 410
Query: 263 ---------------ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
A +F++ME + SWN IIA + E ++LF M +
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------- 352
PD T S++ AC +L GM++H +IK G + V +AI+
Sbjct: 471 PDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKI 530
Query: 353 ---------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ Q FS ML PD+ T+ V+ CA +A++
Sbjct: 531 HERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV 590
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E+G Q+H I+K L DV++ + ++DMY KCG++ +R +F D V+WS++I Y
Sbjct: 591 ELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAY 650
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G GE+A+KLF M+ V+PNH + VL AC+H+G V++GL +R M++ YG+ P
Sbjct: 651 AYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQ 710
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E SC+VDLL R+G+V+EA + I M F+ D V+W++LL C+ GNV+V ++AA ++L
Sbjct: 711 MEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLL 770
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++DP +S+A VLL N+YA +G W EVA++ MK ++K PG SWI+++ ++HA
Sbjct: 771 QLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHA 825
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 237/539 (43%), Gaps = 99/539 (18%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC------------- 128
T++ + CS+L+++ G++ H I + P + N +L Y KC
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 129 ------------------GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
G++E A+ +FD MP+R+VVSW +M++ QNG +IE++
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M + D TF +++AC+G+ GLG Q+H I+ S +++ AL+ MY+
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
++ A+N+F + + N W+ +IAG
Sbjct: 220 KLDHAFNIFCEMPER----------------------------NSVCWSAVIAGYVRNDR 251
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-YSNV---- 345
E + L+ M D + T S +C + G Q+H+Y +K F Y N+
Sbjct: 252 FTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTA 311
Query: 346 -----PVC---------------------NAIL-----QHQAGELFRLFSLMLASQTKPD 374
C NA++ Q Q E +F + S D
Sbjct: 312 TLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFD 371
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
I+ + + AC+A+ G QLH +K GL ++ V N ++DMY KCG+L A +F+
Sbjct: 372 EISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFD 431
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
ME D VSW+++I + Q EE L LF M S + P+ T V+ AC+ +
Sbjct: 432 DMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNY 491
Query: 495 GLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G++++ R++++ G+ S ++D+ + G + EAE I++ + V W S+++
Sbjct: 492 GMEVHGRVIKSGMGL--DWFVGSAIIDMYCKCGMLVEAEK-IHERLEERTTVSWNSIIS 547
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 207/427 (48%), Gaps = 55/427 (12%)
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+ TF I + CS L + G+Q HA + + + N L+ Y K + A+NVF
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 241 SIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+ ++D+ SW +MI G++ ++FA+ +F+ M ++ SWN++++ +++ +
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI------ 351
F++M E+ D T +L ACT G+Q+H I+ GF S+V A+
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217
Query: 352 ---LQHQ-------------------AG--------ELFRLFSLMLASQTKPDHITFNDV 381
L H AG E +L+ +ML TF
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+CA +++ E+GTQLH Y +KT D V +DMY KC + AR++FN +P
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
S ++LIVGYA+ EAL++FR ++ S + + ++L G LTACS + EG+QL+ +
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397
Query: 502 MQN---EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD----DIVVWKSLLASC 554
++ I + ++D+ A+ G + EA + FDD D V W +++A+
Sbjct: 398 AVKCGLDFNICVA----NTILDMYAKCGALMEA-----CLIFDDMEIKDAVSWNAIIAAH 448
Query: 555 KTHGNVD 561
+ + +V+
Sbjct: 449 EQNEHVE 455
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 122/293 (41%), Gaps = 28/293 (9%)
Query: 351 ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
IL Q + + S+ +TF+ + C+ + ++ G Q H I TG V
Sbjct: 14 ILNSQTTPPYAIHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTV 73
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
FV N L+ Y KC +L A +F+ M DV+SW+++I GYA G E A LF M
Sbjct: 74 FVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPER 133
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM-----QNEYGIIPTRERRSCVVDLLARA 525
V V+ +L+ G + ++++ M Q++Y + ++
Sbjct: 134 DV----VSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLG 189
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL-KIDPTNSAALVLL 584
+VH QM FD D+V +L+ T +D A NI ++ NS +
Sbjct: 190 LQVH---CLAIQMGFDSDVVTGTALVDMYSTCKKLD----HAFNIFCEMPERNSVCWSAV 242
Query: 585 CNIYASSGKWEEVARLMGSMKERGV-----------RKVPGQSWIEIQTKIHA 626
Y + ++ E +L M + G+ R G S E+ T++HA
Sbjct: 243 IAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHA 295
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 331/645 (51%), Gaps = 73/645 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C D A ++ D +R W+ L S + Y+E + F + ++ R+ T++
Sbjct: 67 CGETDVAKKLFDRMPKRNVVSWN-SLISGYTQMGFYHEVMNLFKEARM-SDLRLDKFTFS 124
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ +S C L+LGR +H I S +L N +++MY KCG ++ AR+VF+ +
Sbjct: 125 NALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL 184
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG--LCCVGLGRQ 202
+ VSW ++IAG + G + + L V+ML+ GL + + GS ++AC + G+
Sbjct: 185 DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKM 244
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
LH +K ++ AL+ Y K + DA +F KL
Sbjct: 245 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIF-------------------KL-- 283
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSN-----ANEAMSLFSEMGDRELIPDGLTVRSLL 317
M PN+ +N +IAG ANEAM LF EM R + P T S+L
Sbjct: 284 -------MPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSIL 336
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------HQAGEL--- 359
AC++ + G QIH+ I K S+ + NA+++ H +L
Sbjct: 337 KACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVV 396
Query: 360 ------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
LF +L S KPD T + ++ ACA +A+++ G Q+H Y
Sbjct: 397 SWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYA 456
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+KTG+ + N + MY KCG + SA F ++PD+VSWS +I AQ GC +EA+
Sbjct: 457 IKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAV 516
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF M+ SG+ PNH+T +GVL ACSH GLVEEGL+ + IM+ ++GI P + +C+VDL
Sbjct: 517 DLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDL 576
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAGR+ EAE FI F+ D V+W+SLL++C+ H D GKR AE +++++P +A+
Sbjct: 577 LGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASY 636
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIY +G + MK+RGV+K PG SWIE+ +H+
Sbjct: 637 VLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHS 681
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 242/497 (48%), Gaps = 27/497 (5%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L+ + SL G+ H H++ + +P L N++L MY KCG + A+ +FD M
Sbjct: 21 TYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRM 80
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+RNVVSW ++I+G +Q G + + L+ + S L D+FTF + + C + LGR
Sbjct: 81 PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 140
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL- 260
+HA + S G ++ N+LI MY K RI A VF S D SW S+I G+ ++
Sbjct: 141 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 200
Query: 261 ---DFARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+ R + + NL S+ A A SN + ++ +M + GL +
Sbjct: 201 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC-GKMLHGCAVKLGLDLD-- 257
Query: 317 LCACTSPLSLYQG---MQIHSYIIKKGFYSNVPVCNAI----LQHQ------AGELFRLF 363
+ T+ L Y ++ + I K NV + NA+ LQ + A E LF
Sbjct: 258 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 317
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
M + KP TF+ ++ AC+ + + E G Q+H I K L D F+ N L+++Y
Sbjct: 318 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 377
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
GS+ + F+ DVVSW+SLIVG+ Q G E L LF + SG +P+ T+ +L
Sbjct: 378 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 437
Query: 484 TACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+AC+++ V+ G Q+ Y I + + C + A+ G + A + +
Sbjct: 438 SACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQIC---MYAKCGDIDSANMTFKETK-N 493
Query: 542 DDIVVWKSLLASCKTHG 558
DIV W +++S HG
Sbjct: 494 PDIVSWSVMISSNAQHG 510
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 176/431 (40%), Gaps = 73/431 (16%)
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
GL D T+ +++ + + G+ H H+IK+ L N L+ MY K A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+F + ++++ SW S+I G++++ F +E M
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGF----------------------------YHEVM 105
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ 355
+LF E +L D T + L C L L G IH+ I G V + N+++
Sbjct: 106 NLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMY 165
Query: 356 ----------------------------AG--------ELFRLFSLMLASQTKPDHITFN 379
AG E+ RL ML +
Sbjct: 166 CKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALG 225
Query: 380 DVMGACAA--MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ AC + +S+E G LH +K GL LDV V L+D Y K G L A ++F M
Sbjct: 226 SALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP 285
Query: 438 DPDVVSWSSLIVGYAQFGC-----GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
DP+VV ++++I G+ Q EA+ LF M+S G++P+ T +L ACS +
Sbjct: 286 DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAF 345
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E G Q++ + +Y + + +V+L + +G + + + D+V W SL+
Sbjct: 346 ECGKQIHAQI-FKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIV 403
Query: 553 SCKTHGNVDVG 563
+G + G
Sbjct: 404 GHVQNGQFEGG 414
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/579 (35%), Positives = 315/579 (54%), Gaps = 64/579 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y +++ C + L ++VHD I+ S+ + +A + N++L++Y +CG L++AR VFD +
Sbjct: 31 YVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALV 90
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+++ SW AMIAG ++ A+ L+ +M G+ P+ T+ I++AC+ L + G++
Sbjct: 91 KKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKE 150
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+HA + S + AL+ MY K I +
Sbjct: 151 VHACIRHGGLESDVRVGTALLRMYGKCGSI----------------------------NE 182
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR +F+ + + ++ SW +I A N EA L +M P+ +T S+L AC S
Sbjct: 183 ARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACAS 242
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------------- 353
+L ++H + + G +V V A++Q
Sbjct: 243 EGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVM 302
Query: 354 ------HQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
H G E + LF M KPD I F ++ ACA+ +LE ++H + + +GL
Sbjct: 303 IGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGL 362
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+DV V L+ MY K GS+ AR +F+ M+ +VVSW+++I G AQ G G++AL++FRR
Sbjct: 363 EVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRR 422
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M + GV+P+ VT V VL+ACSH GLV+EG Y M YGI P +C+VDLL RAG
Sbjct: 423 MTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAG 482
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EA+ FI+ MA D D W +LL SC+T+GNV++G+ A+ LK+DP N+A VLL N
Sbjct: 483 RLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSN 542
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
IYA +GKW+ V+ + M+ERG+RK PG+SWIE+ KIH
Sbjct: 543 IYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIH 581
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 203/471 (43%), Gaps = 72/471 (15%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C L +A V D+ +++ W+ + + + +A+ F + + ++P+ T
Sbjct: 76 CGRLQEARCVFDALVKKSGASWNA-MIAGYVEHKHAEDAMRLFREMCHEG---VQPNAGT 131
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y ++ AC+SL +L+ G++VH I + D + +L MYGKCGS+ +AR +FD +
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM 191
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+++SWT MI +Q+G A L +QM Q G P+ T+ SI+ AC+ + ++
Sbjct: 192 NHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKR 251
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H H + + + AL+ MY K I DA VF + +D+ SW MI F
Sbjct: 252 VHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF----- 306
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A +EA LF +M PD + S+L AC S
Sbjct: 307 -----------------------AEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACAS 343
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------ 352
+L +IH + + G +V V A++
Sbjct: 344 AGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAM 403
Query: 353 -----QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-G 405
QH G+ +F M A KPD +TF V+ AC+ ++ G + + + G
Sbjct: 404 ISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYG 463
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFG 455
+ DV N ++D+ + G L A+ + M DPD +W +L+ +G
Sbjct: 464 IEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYG 514
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 217/464 (46%), Gaps = 74/464 (15%)
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNAL 222
AI + + LQ GL+ D F + +++ C + +Q+H +IKS E +H++ N L
Sbjct: 12 AIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM--NNL 69
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
+ +Y + R+ +A VF ++ +K SW N +I
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASW----------------------------NAMI 101
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
AG +A +AM LF EM + P+ T +L AC S +L G ++H+ I G
Sbjct: 102 AGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLE 161
Query: 343 SNVPVCNAILQ---------------------------------HQAG---ELFRLFSLM 366
S+V V A+L+ Q+G E +RL M
Sbjct: 162 SDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQM 221
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
KP+ IT+ ++ ACA+ +L+ ++H + + GL LDV V L+ MY K GS+
Sbjct: 222 EQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSI 281
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
AR +F+ M+ DVVSW+ +I +A+ G G EA LF +M++ G +P+ + + +L AC
Sbjct: 282 DDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNAC 341
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
+ G +E +++R + G+ + +V + +++G + +A ++M ++V
Sbjct: 342 ASAGALEWVKKIHRHALDS-GLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV-RNVVS 399
Query: 547 WKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLLCN 586
W ++++ HG ++V +R + +K D A++ C+
Sbjct: 400 WNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACS 443
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 177/383 (46%), Gaps = 40/383 (10%)
Query: 35 VDSFLRRFDDIWDFDLFSSLCKQNLYNEA---LVAFDFL--QNNTNFRIRPSTYADLISA 89
++ R FD++ + D+ S Y ++ A+ + F+ TY +++A
Sbjct: 180 INEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA 239
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
C+S +L+ ++VH H L + + D + ++ MY K GS++DAR+VFD M R+VVSW
Sbjct: 240 CASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSW 299
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
MI +++G+ + A +L++QM G PD F SI+ AC+ + +++H H +
Sbjct: 300 NVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALD 359
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
S + AL+ MY+K I DA VF + +++ SW +MI G ++ +
Sbjct: 360 SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQ----- 414
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
+A+ +F M + PD +T ++L AC+ + +G
Sbjct: 415 -----------------------DALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEG 451
Query: 330 MQIHSYIIK-KGFYSNVPVCNAI--LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
+ + + G +V CN + L +AG L + PD T+ ++G+C
Sbjct: 452 RSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCR 511
Query: 387 AMASLEMGTQLHCYIMKTGLALD 409
++E+G + K L LD
Sbjct: 512 TYGNVELGE----LVAKERLKLD 530
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 118/231 (51%), Gaps = 9/231 (3%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D + +V+ C L Q+H I+K+ + + VMN L+ +Y++CG L AR +F
Sbjct: 27 DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVF 86
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ + SW+++I GY + E+A++LFR M GV+PN T + +L AC+ + ++
Sbjct: 87 DALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALK 146
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
G +++ +++ G+ + ++ + + G ++EA + + + DI+ W ++ +
Sbjct: 147 WGKEVHACIRHG-GLESDVRVGTALLRMYGKCGSINEARRIFDNL-MNHDIISWTVMIGA 204
Query: 554 CKTHGNVDVGKRAAENILKID----PTNSAALVLLCNIYASSGKWEEVARL 600
GN GK A +L+++ N+ V + N AS G + V R+
Sbjct: 205 YAQSGN---GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRV 252
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 216/655 (32%), Positives = 330/655 (50%), Gaps = 109/655 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T+A ++ ACS + LG +VH + + D V + +++MY KC L+DA VF E
Sbjct: 139 ATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFRE 198
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RN+V W+A+IAG QN + ++L+ ML+ G+ Q T+ S+ R+C+GL LG
Sbjct: 199 MPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLG 258
Query: 201 RQLHAHVIKSEHGSHLI-------------------------------SQNALIAMYTKF 229
QLH H +KS+ I S NA+I Y +
Sbjct: 259 TQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQ 318
Query: 230 DRILDAWNVFSSIARKD---------------------------------------ITSW 250
D+ L A ++F S+ R + I
Sbjct: 319 DQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVA 378
Query: 251 GSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+++D + K L A +F EME + SWN IIA + +SLF M +
Sbjct: 379 NTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTME 438
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------- 352
PD T S++ AC +L G +IH IIK G + V +A++
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 353 ---------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
Q Q+ R FS ML PD+ T+ V+ CA MA++
Sbjct: 499 HARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATI 558
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E+G Q+H I+K L DV++ + L+DMY KCG++ +R +F D V+WS++I Y
Sbjct: 559 ELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAY 618
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G GE+A+ LF M+ V+PNH + VL AC+H+G V++GL ++ M + YG+ P
Sbjct: 619 AYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQ 678
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E SC+VDLL R+G+V+EA I M F+ D V+W++LL++CK GNV+V ++A ++L
Sbjct: 679 MEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL 738
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++DP +S+A VLL N+YA G W EVA++ MK ++K PG SWIE++ ++H
Sbjct: 739 QLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHT 793
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 246/547 (44%), Gaps = 49/547 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC------------- 128
T++ ++ CS+L++L G++VH ++ + P + N +L Y K
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 129 ------------------GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
G++ A+ +FD MP+R+VVSW ++++ NG +IE++V
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M + D TF I++ACSG+ GLG Q+H I+ + +++ +AL+ MY+K
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVAS 287
++ DA+ VF + +++ W ++I G+ + D +F +M + + A V
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 288 CSNANEAMSLFSEMGDRELIPD-------GLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
A L +++ L D G + C ++ ++
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ N + Q Q + +F + + D I+ + + AC+ + G QLH
Sbjct: 308 Y--NAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGL 365
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K GL ++ V N ++DMY KCG+L A +F ME D VSW+++I + Q +
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKT 425
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVV 519
L LF M S + P+ T V+ AC+ + G +++ RI+++ G+ S +V
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGL--DWFVGSALV 483
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTN 577
D+ + G + EAE I+ + V W S+++ + + +R +L+ I P N
Sbjct: 484 DMYGKCGMLMEAEK-IHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDN 542
Query: 578 SAALVLL 584
+L
Sbjct: 543 YTYATVL 549
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 205/412 (49%), Gaps = 41/412 (9%)
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+ TF I++ CS L + G+Q+H +I + + N L+ Y K ++ A+ VF
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 241 SIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+ ++D+ SW ++I G++ + FA+++F+ M ++ SWN++++ +++ +
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---- 353
F M ++ D T +L AC+ G+Q+H I+ GF ++V +A++
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 354 -HQAGELFRLF-----------SLMLASQTKPDHI--------------------TFNDV 381
+ + FR+F S ++A + D T+ V
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+CA +++ ++GTQLH + +K+ A D + +DMY KC + A ++FN + +P
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR 305
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
S++++IVGYA+ G +AL +F+ ++ + + + ++L G LTACS + EG+QL+ +
Sbjct: 306 QSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGL 365
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ G+ + ++D+ + G + EA +M D V W +++A+
Sbjct: 366 AV-KCGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAVSWNAIIAA 415
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+TF+ ++ C+ + +L G Q+H ++ TG ++V N L+ Y K + A ++F+
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 436 MEDPDVVSWSSLIVGYAQF-------------------------------GCGEEALKLF 464
M DV+SW++LI GYA G +++++F
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RMRS + ++ T +L ACS + GLQ++ + + G S +VD+ ++
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVH-CLAIQMGFENDVVTGSALVDMYSK 185
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
++ +A +M + ++V W +++A + G + +++LK+
Sbjct: 186 CKKLDDAFRVFREMP-ERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKV 233
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/583 (34%), Positives = 310/583 (53%), Gaps = 70/583 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ + + + + EAL F + + +F + ++ +SACS L+ L+LG ++H I S
Sbjct: 127 MIAGFAQHDRFEEALDWFVRMHRD-DFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKS 185
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
K D + + +++ Y KCG + AR VFD M ++NVVSW +I QNG A+E +
Sbjct: 186 KYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAF 245
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-GSHLISQNALIAMYTK 228
+M + G PD+ T S++ AC+ L G Q+HA V+KS+ + LI NAL+ MY K
Sbjct: 246 GRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAK 305
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
R+ +A R VF+ M N S T+++G A
Sbjct: 306 CGRVNEA----------------------------RCVFDRMPVRNAVSETTMVSGYAKS 337
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
++ A S+F+ + ++++ N +
Sbjct: 338 ASVKAARSMFATIKQKDIVS----------------------------------WNALIA 363
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+ E LF ++ P H TF +++ A A +A LE+G Q H +++K G
Sbjct: 364 GYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRF 423
Query: 409 ------DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
D+FV N L+DMY+KCGS+ +F M + D VSW+++I+GYAQ G G EAL+
Sbjct: 424 QSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALE 483
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF++M SG +P+HVT++G L ACSH GLVEEG + + M E+G++P ++ +C+VDLL
Sbjct: 484 LFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLL 543
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + EA+D I M D VVW SLL++CK H N+ +GK AE I +IDPT+S V
Sbjct: 544 GRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYV 603
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL N+Y+ G+W + + M+ RGV K PG SWI+IQ+ +H
Sbjct: 604 LLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVH 646
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 40/271 (14%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE-- 431
D F ++ C + S +H +++T +VF+ N L+D+Y KCG L AR+
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 432 -----------------------------LFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
LF+ M + D SW+S+I G+AQ EEAL
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM-QNEYGIIPTRERRSCVVDL 521
F RM N + L+ACS + ++ G Q++ ++ +++Y + S ++D
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMG--SGLIDF 200
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTN 577
++ G V A + M + ++V W L+ + +G ++ R E K D
Sbjct: 201 YSKCGLVGCARRVFDGME-EKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVT 259
Query: 578 SAALVLLCNIYASSGKWEEV-ARLMGSMKER 607
A++V C A+ + ++ AR++ S K R
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFR 290
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 332/620 (53%), Gaps = 104/620 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S +A L+ +C RS + R VH IL ++ + + N ++++YGKC L+DAR +FD
Sbjct: 16 SPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDR 75
Query: 141 MPQRNVV-------------------------------SWTAMIAGCSQNGQENAAIELY 169
MPQRN SW +M++G +Q+ + ++E +
Sbjct: 76 MPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
V+M + + ++++FGS + AC+GL + +G Q+HA V KS + + + +ALI MY+K
Sbjct: 136 VKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC 195
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ A VFS + + NL +WN++I
Sbjct: 196 GSVACAEEVFSGMIER----------------------------NLVTWNSLITCYEQNG 227
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-FYSNVPVC 348
A+EA+ +F M D L PD +T+ S++ AC S +L +G+QIH+ ++K F ++ +
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287
Query: 349 NAILQHQA-----GELFRLFS---------------------------LMLASQTKPDHI 376
NA++ A E R+F M + T+ + +
Sbjct: 288 NALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVV 347
Query: 377 TFNDVMGACAAMASLEMGTQLH-----------CYIMKTGLALDVFVMNGLMDMYVKCGS 425
++N ++ E +L Y L D+FV N L+DMY+KCGS
Sbjct: 348 SWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGS 407
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ +F M++ D VSW+++IVGYAQ G G EAL++FR+M G +P+HVT++GVL A
Sbjct: 408 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCA 467
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
CSH GLVEEG + M+ E+G+IP ++ +C+VDLL RAG ++EA++ I M + D V
Sbjct: 468 CSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV 526
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
VW SLLA+CK HGN+++GK AAE +L+IDP NS VLL N+YA G+W +V R+ M+
Sbjct: 527 VWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMR 586
Query: 606 ERGVRKVPGQSWIEIQTKIH 625
++GV K PG SWIE+++++H
Sbjct: 587 QQGVTKQPGCSWIEVESRVH 606
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 39/249 (15%)
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ F ++ +C S +H I+ T ++++F+ N L+D+Y KC L AR+L
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 433 FN-------------------------------FMEDPDVVSWSSLIVGYAQFGCGEEAL 461
F+ M +PD SW+S++ G+AQ EE+L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM-QNEYGIIPTRERRSCVVD 520
+ F +M N + L+AC+ + + G Q++ ++ ++ Y S ++D
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST--DVYMGSALID 190
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPT 576
+ ++ G V AE+ + M + ++V W SL+ + +G ++V R ++ L+ D
Sbjct: 191 MYSKCGSVACAEEVFSGM-IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEV 249
Query: 577 NSAALVLLC 585
A++V C
Sbjct: 250 TLASVVSAC 258
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 206/634 (32%), Positives = 334/634 (52%), Gaps = 69/634 (10%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
+ E + S + D + L S L +Q + AL F +Q + ++P T A L+S
Sbjct: 314 SAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC---LKPDCITVASLLS 370
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+S+ +L G ++H H + + D +L +L++Y KC +E A F N+V
Sbjct: 371 ACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVL 430
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W M+ Q + + E++ QM G++P+QFT+ SI+R C+ L + LG Q+H HVI
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI 490
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
K+ ++ + LI MY K+ +L A +
Sbjct: 491 KTGFQLNVYVCSVLIDMYAKY----------------------------GQLALALRILR 522
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ ++ SW +IAG +EA+ LF EM R + D + S + AC +L Q
Sbjct: 523 RLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQ 582
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQ---------------------------------HQ 355
G QIH+ GF +++ + NA++ Q
Sbjct: 583 GQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQ 642
Query: 356 AG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+G E ++F ML ++ + + T+ + A A++A+++ G Q+H ++KTG + V
Sbjct: 643 SGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREV 702
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ +Y K GS+ A FN M + +V+SW+++I GY+Q GCG EAL+LF M+ G+
Sbjct: 703 SNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI 762
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
PNHVT VGVL+ACSH+GLV+EGL + M + ++P E CVVDLL RAG++ A
Sbjct: 763 MPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAM 822
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
++I +M D ++W++LL++C H N+++G+RAA ++L+++P +SA VL+ NIYA S
Sbjct: 823 EYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSR 882
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+W MK+RGV+K PG+SWIE++ +HA
Sbjct: 883 QWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHA 916
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 272/576 (47%), Gaps = 81/576 (14%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFR------------IRPS 81
+VD++ R D +F +++++ + F+ +NF+ I P+
Sbjct: 99 LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPN 158
Query: 82 --TYADLISACSSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T+A ++ AC + ++VH ++ N ++++Y K G +E A+ VF
Sbjct: 159 GYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF 218
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+ + +++V+W AMI+G SQNG E AI L+ M S + P + S++ A + +
Sbjct: 219 NCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFE 278
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG QLH VIK S N L+A+Y++ +++ A +FS++ +D S+ S+I G
Sbjct: 279 LGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLV 338
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ F ++ A+ LF++M L PD +TV SLL
Sbjct: 339 QQGF----------------------------SDRALELFTKMQRDCLKPDCITVASLLS 370
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----------HQ------------ 355
AC S +L++GMQ+HS+ IK G +++ + ++L H+
Sbjct: 371 ACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVL 430
Query: 356 -------AGEL------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
G+L F +F M P+ T+ ++ C ++ +L +G Q+H +++
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI 490
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KTG L+V+V + L+DMY K G L A + + + DVVSW+++I GY Q EAL+
Sbjct: 491 KTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQ 550
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M G++ +++ ++AC+ + + +G Q++ G + ++ L
Sbjct: 551 LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIH-AQSYAAGFGADLSINNALISLY 609
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
AR GR+ EA ++ D + + W SL++ G
Sbjct: 610 ARCGRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSG 644
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 227/518 (43%), Gaps = 67/518 (12%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
R Y L+ C + SL ++H I S + +L + +++ Y + G A
Sbjct: 55 RSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVK 114
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC-SGLC 195
VFDE R+V SW MI L+ +ML G+ P+ +TF +++AC G
Sbjct: 115 VFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDI 174
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+Q+H+ S + N LI +Y+K I A VF+ I KDI +W +MI
Sbjct: 175 AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMIS 234
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G S+ N +E EA+ LF +M E+ P + S
Sbjct: 235 GLSQ--------NGLEE--------------------EAILLFCDMHASEIFPTPYVLSS 266
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------- 352
+L A T G Q+H +IK GF+S VCN ++
Sbjct: 267 VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 353 -------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q + LF+ M KPD IT ++ ACA++ +L G QLH
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ +K G++ D+ + L+D+Y KC + +A + F E ++V W+ ++V Y Q +
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSD 446
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
+ ++FR+M+ G+ PN T +L C+ +G + G Q++ + G S ++
Sbjct: 447 SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLI 505
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
D+ A+ G++ A + ++ +DD+V W +++A H
Sbjct: 506 DMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 153/336 (45%), Gaps = 42/336 (12%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A VF+E + ++ SWN +I + + + LF M + P+G T +L AC
Sbjct: 112 AVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG 171
Query: 323 -PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------------ 361
++ Q+HS GF S+ V N ++ A ++F
Sbjct: 172 GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVA 231
Query: 362 ----------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
LF M AS+ P + V+ A + E+G QLHC ++K G
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ +V NGL+ +Y + L SA +F+ M D VS++SLI G Q G + AL+LF
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ ++P+ +T+ +L+AC+ VG + +G+QL+ + G+ ++DL ++
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHS-HAIKAGMSADIILEGSLLDLYSKC 410
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
V A F ++IV+W +L + +G +D
Sbjct: 411 ADVETAHKFFLTTE-TENIVLWNVMLVA---YGQLD 442
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
+L + M + ++ + ++ C SL +LHC I K+G + +++ L+D Y
Sbjct: 44 QLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNY 103
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
+ G A ++F+ + V SW+ +I + + LFRRM + G+ PN T
Sbjct: 104 FRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFA 163
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
GVL AC + ++ YG + + ++DL ++ G + A+ N +
Sbjct: 164 GVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
DIV W ++++ +G A++L C+++AS
Sbjct: 224 -KDIVTWVAMISGLSQNG-----------------LEEEAILLFCDMHAS 255
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 210/586 (35%), Positives = 319/586 (54%), Gaps = 74/586 (12%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N IL+ Y K G LE+A VF+EMP+ + VSWTAMI G +Q GQ AI ++ +M+ +
Sbjct: 83 NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P QFT +++ +C+ + C+G+GR++H+ V+K S++ N+L+ MY K + A V
Sbjct: 143 PTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIV 202
Query: 239 FSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + K +SW +MI + +D A+ F +M ++ SWN +I+G EA+
Sbjct: 203 FDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREAL 262
Query: 296 SLFSEM-GDRELIPDGLTVRSLLCAC----------------------------TSPLSL 326
+FS+M D PD T+ S L AC + +S+
Sbjct: 263 DIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISM 322
Query: 327 YQ---GMQIHSYIIKKGFYSNVPVC--NAILQ--------HQAGELF------------- 360
Y G++I II++ SN+ V A+L + A +F
Sbjct: 323 YSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTA 382
Query: 361 ---------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
LF M+ KP++ T ++ +++ASL+ G Q+H ++G
Sbjct: 383 MIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSG 442
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLF 464
A V V N L+ MY K GS+ AR +FN + D ++W+S+I+ AQ G GEEAL LF
Sbjct: 443 NASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLF 502
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM +G++P+H+T VGVL+AC+HVGLVE+G Y +MQN + IIPT +C++DL R
Sbjct: 503 ERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGR 562
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + EA FI M + D++ W SLLASCK H NV++ + AAE +L I+P NS A L
Sbjct: 563 AGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSAL 622
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
N+Y++ G+WE A + SMK++GV+K G SW++I+ K+H G D
Sbjct: 623 ANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVD 668
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 255/538 (47%), Gaps = 81/538 (15%)
Query: 94 RSLQL-----GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV-- 146
RSL+ G+ +H I+ + L N+++N Y K G + DA VFDEMP ++V
Sbjct: 22 RSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFS 81
Query: 147 -----------------------------VSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
VSWTAMI G +Q GQ AI ++ +M+ +
Sbjct: 82 WNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDV 141
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
P QFT +++ +C+ + C+G+GR++H+ V+K S++ N+L+ MY K + A
Sbjct: 142 PPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKI 201
Query: 238 VFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
VF + K +SW +MI + +D A+ F +M ++ SWN +I+G EA
Sbjct: 202 VFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREA 261
Query: 295 MSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
+ +FS+M D PD T+ S L AC + +L G QIH++II+ F
Sbjct: 262 LDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD----------- 310
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA--LDVF 411
TF V A +M S G ++ I++ + LDV
Sbjct: 311 -----------------------TFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVI 347
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
L+D YVK G + AR +F+ + DVV+W+++IVGY Q G ++A++LFR M G
Sbjct: 348 AFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEG 407
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+PN+ TL +L+ S + ++ G Q++ G + + ++ + A++G +++A
Sbjct: 408 PKPNNYTLATMLSVSSSLASLDHGRQIH-ASATRSGNASSVSVSNALITMYAKSGSINDA 466
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLLC 585
N + + D + W S++ + HG + + +R EN +K D ++ C
Sbjct: 467 RWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSAC 524
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 194/456 (42%), Gaps = 75/456 (16%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
L+D A + + R W+ + S + EAL F + +++ + T A
Sbjct: 226 LVDLAQVQFEQMIERDVVSWN-AMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASA 284
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE-------------- 132
+SAC++L +L+LG+++H HI+ ++ + N +++MY K G +E
Sbjct: 285 LSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNL 344
Query: 133 -------------------DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
AR +FD + R+VV+WTAMI G QNG A+EL+ M+
Sbjct: 345 DVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMI 404
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ G P+ +T +++ S L + GRQ+HA +S + S + NALI MY K I
Sbjct: 405 KEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSIN 464
Query: 234 DAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
DA VF+ I ++D +W SM I +A
Sbjct: 465 DARWVFNLIHWKRDTITWTSM----------------------------IIALAQHGLGE 496
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACT------SPLSLYQGMQ-IHSYIIKKGFYSNV 345
EA++LF M + + PD +T +L ACT S Y MQ H I Y+
Sbjct: 497 EALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYA-- 554
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
C L +AG L + + +PD I + ++ +C ++E+ ++ +
Sbjct: 555 --CMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELA-EVAAERLLLI 611
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ + L ++Y CG +A + M+D V
Sbjct: 612 EPENSGAYSALANVYSACGQWENAANIRKSMKDKGV 647
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 196/591 (33%), Positives = 306/591 (51%), Gaps = 75/591 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L+ C RS + VH H++ + C + + + ++N+Y KCG++EDAR VFD M
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RNVV+WT ++ G QN Q AI ++ +ML +G P +T +++ ACS L + LG Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
HA++IK +AL ++Y+K R+ DA FS I K
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREK----------------- 232
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
N+ SW + ++ A + + LF EM ++ P+ T+ S L C
Sbjct: 233 -----------NVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCE 281
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------------- 353
LSL G Q++S IK G+ SN+ V N++L
Sbjct: 282 ILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAM 341
Query: 354 ------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
H+ E +LFS + S KPD T + V+ C+ M ++E G
Sbjct: 342 IAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGE 401
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H +KTG DV V L+ MY KCGS+ A + F M +++W+S+I G++Q G
Sbjct: 402 QIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHG 461
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
++AL +F M +GVRPN VT VGVL+ACSH G+V + L + IMQ +Y I P +
Sbjct: 462 MSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHY 521
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C+VD+ R GR+ +A +FI +M ++ +W + +A CK+HGN+++G AAE +L + P
Sbjct: 522 ECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKP 581
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ VLL N+Y S+ ++E+V+R+ M+E V K+ SWI I+ K+++
Sbjct: 582 KDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYS 632
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 226/478 (47%), Gaps = 65/478 (13%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ + C ++ A V D+ LRR W L + + A+ F + ++
Sbjct: 110 NVYAKCGNMEDARRVFDNMLRRNVVAWT-TLMVGFVQNSQPKHAIHVFQEMLYAGSY--- 165
Query: 80 PSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
PS Y + ++ ACSSL+SL+LG + H +I+ DA + + + ++Y KCG LEDA
Sbjct: 166 PSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKT 225
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F + ++NV+SWT+ ++ C+ NG + L+V+M+ + P++FT S + C + +
Sbjct: 226 FSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSL 285
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG Q+++ IK + S+L +N+L+ +Y K I++A +F+ + + +W +MI G
Sbjct: 286 ELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGH 345
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+++ E+ NL ++C +EA+ LFS++ + PD T+ S+L
Sbjct: 346 AQM-------MELTKDNL----------SACHRGSEALKLFSKLNLSGMKPDLFTLSSVL 388
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
C+ L++ QG QIH+ IK GF S+V V +++
Sbjct: 389 SVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMI 448
Query: 353 ----------QH-QAGELFRLFSLMLASQTKPDHITFNDVMGAC--AAMASLEMGT-QLH 398
QH + + +F M + +P+ +TF V+ AC A M S + ++
Sbjct: 449 AWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIM 508
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFG 455
K A+D + ++DM+V+ G L A M +P WS+ I G G
Sbjct: 509 QKKYKIKPAMDHY--ECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHG 564
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/620 (34%), Positives = 321/620 (51%), Gaps = 72/620 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + Y+E + F + ++ R+ T+++ +S C L+LGR +H I S
Sbjct: 12 LISGYTQMGFYHEVMNLFKEARM-SDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVS 70
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+L N +++MY KCG ++ AR+VF+ + + VSW ++IAG + G + + L
Sbjct: 71 GLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLL 130
Query: 170 VQMLQSGLMPDQFTFGSIIRACSG--LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
V+ML+ GL + + GS ++AC + G+ LH +K ++ AL+ Y
Sbjct: 131 VKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYA 190
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K + DA +F KL M PN+ +N +IAG
Sbjct: 191 KIGDLEDATKIF-------------------KL---------MPDPNVVMYNAMIAGFLQ 222
Query: 288 CSN-----ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
ANEAM LF EM R + P T S+L AC++ + G QIH+ I K
Sbjct: 223 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 282
Query: 343 SNVPVCNAILQ---------------HQAGEL---------------------FRLFSLM 366
S+ + NA+++ H +L LF +
Sbjct: 283 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 342
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
L S KPD T + ++ ACA +A+++ G Q+H Y +KTG+ + N + MY KCG +
Sbjct: 343 LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDI 402
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
SA F ++PD+VSWS +I AQ GC +EA+ LF M+ SG+ PNH+T +GVL AC
Sbjct: 403 DSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 462
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SH GLVEEGL+ + IM+ ++GI P + +C+VDLL RAGR+ EAE FI F+ D V+
Sbjct: 463 SHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVM 522
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W+SLL++C+ H D GKR AE +++++P +A+ VLL NIY +G + MK+
Sbjct: 523 WRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKD 582
Query: 607 RGVRKVPGQSWIEIQTKIHA 626
RGV+K PG SWIE+ +H+
Sbjct: 583 RGVKKEPGLSWIEVGNVVHS 602
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 210/438 (47%), Gaps = 27/438 (6%)
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RNVVSW ++I+G +Q G + + L+ + S L D+FTF + + C + LG
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R +HA + S G ++ N+LI MY K RI A VF S D SW S+I G+ ++
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 261 ----DFARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+ R + + NL S+ A A SN + ++ +M + GL +
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC-GKMLHGCAVKLGLDLD- 178
Query: 316 LLCACTSPLSLYQG---MQIHSYIIKKGFYSNVPVCNAI----LQHQ------AGELFRL 362
+ T+ L Y ++ + I K NV + NA+ LQ + A E L
Sbjct: 179 -VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M + KP TF+ ++ AC+ + + E G Q+H I K L D F+ N L+++Y
Sbjct: 238 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 297
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
GS+ + F+ DVVSW+SLIVG+ Q G E L LF + SG +P+ T+ +
Sbjct: 298 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 357
Query: 483 LTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
L+AC+++ V+ G Q+ Y I + + C + A+ G + A +
Sbjct: 358 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQIC---MYAKCGDIDSANMTFKETK- 413
Query: 541 DDDIVVWKSLLASCKTHG 558
+ DIV W +++S HG
Sbjct: 414 NPDIVSWSVMISSNAQHG 431
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 143/337 (42%), Gaps = 45/337 (13%)
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
M N+ SWN++I+G +E M+LF E +L D T + L C L L G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQ----------------------------AG---- 357
IH+ I G V + N+++ AG
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 358 ----ELFRLFSLMLASQTKPDHITFNDVMGACAA--MASLEMGTQLHCYIMKTGLALDVF 411
E+ RL ML + + AC + +S+E G LH +K GL LDV
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC-----GEEALKLFRR 466
V L+D Y K G L A ++F M DP+VV ++++I G+ Q EA+ LF
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+S G++P+ T +L ACS + E G Q++ + +Y + + +V+L + +G
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI-FKYNLQSDEFIGNALVELYSLSG 299
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
+ + + D+V W SL+ +G + G
Sbjct: 300 SIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGG 335
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 322/623 (51%), Gaps = 75/623 (12%)
Query: 83 YADLISACSS---LRSLQLGRKVHDHILSSKCQ-PDAVLHNHILNMYGKCGSLEDARMVF 138
YA ++S+ + +++ VH IL + Q P L NH+L Y K G L AR VF
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 139 DEMP-------------------------------QRNVVSWTAMIAGCSQNGQENAAIE 167
DEMP +R+ VS+ A+I G S G +++
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131
Query: 168 LYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
LY +L + + P + T ++I S L LG +H V++ G++ + L+ MY
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIA 283
K I DA VF + K + + ++I G + ++ A+ +F M + +W T++
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G+ EA+ +F M + D T S+L AC + +L +G QIH+YI + +
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYED 311
Query: 344 NVPVCNAILQHQAG------------------------------------ELFRLFSLML 367
NV V +A++ + E R FS M
Sbjct: 312 NVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQ 371
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
KPD T V+ +CA +ASLE G Q HC + +GL + V N L+ +Y KCGS+
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A LF+ M D VSW++L+ GYAQFG +E + LF +M ++G++P+ VT +GVL+ACS
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACS 491
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
GLVE+G + MQ ++GI+P + +C++DL +R+GR EAE+FI QM D W
Sbjct: 492 RAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL+SC+ GN+++GK AAEN+L+ DP N A+ VLLC+++A+ G+W EVA L M++R
Sbjct: 552 ATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDR 611
Query: 608 GVRKVPGQSWIEIQTKIHASGND 630
V+K PG SWI+ + K+H D
Sbjct: 612 QVKKEPGCSWIKYKNKVHIFSAD 634
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 187/442 (42%), Gaps = 99/442 (22%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP+ T + +I S+L LG VH +L A + + +++MY K G + DAR
Sbjct: 142 VRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDAR 201
Query: 136 MVFDEMPQRNVV-------------------------------SWTAMIAGCSQNGQENA 164
VF EM + VV +WT M+ G +QNG +
Sbjct: 202 RVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLE 261
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A++++ +M G+ DQ+TFGSI+ AC L + G+Q+HA++ ++ + ++ +AL+
Sbjct: 262 ALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVD 321
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY+K I A VF + ++I SW +MI G+ G
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGY--------------------------G 355
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+CS EA+ FSEM + PD T+ S++ +C + SL +G Q H + G
Sbjct: 356 QNACS--EEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 345 VPVCNAILQ------------------------------------HQAGELFRLFSLMLA 368
+ V NA++ +A E LF MLA
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLA 473
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLG 427
+ KPD +TF V+ AC+ +E G + K G+ ++D+Y + G
Sbjct: 474 NGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFK 533
Query: 428 SARELFNFM-EDPDVVSWSSLI 448
A E M PD W++L+
Sbjct: 534 EAEEFIKQMPHSPDAFGWATLL 555
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 37/375 (9%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C +++ A + + R W + + L + L EAL F ++ I T+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWT-TMVTGLTQNGLQLEALDVFRRMRAE-GVGIDQYTFG 282
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC +L +L+ G+++H +I + + + + + +++MY KC S+ A VF M R
Sbjct: 283 SILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N++SWTAMI G QN A+ + +M G+ PD FT GS+I +C+ L + G Q H
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ S ++ NAL+ +Y K I DA +F ++ D SW +++ G+++
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQF---- 458
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
A E + LF +M L PDG+T +L AC+
Sbjct: 459 ------------------------GKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG 494
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ +G + K + VP+ C L ++G + PD +
Sbjct: 495 LVEKGCDYFDSMQKD--HGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552
Query: 380 DVMGACAAMASLEMG 394
++ +C ++E+G
Sbjct: 553 TLLSSCRLRGNMEIG 567
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 320/599 (53%), Gaps = 67/599 (11%)
Query: 65 VAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
V+ + + P Y + ++SACS L L+ G+++H ++L + D + N ++
Sbjct: 213 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLI 272
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+ Y KC ++ R +FD+M +N++SWT MI+G QN + A++L+ +M + G PD F
Sbjct: 273 DFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGF 332
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
S++ +C + GRQ+HA+ IK+ S +N LI MY K + ++DA
Sbjct: 333 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDA------- 385
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+ VF+ M N+ S+N +I G +S +EA+ LF EM
Sbjct: 386 ---------------------KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR 424
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------YS------ 343
R P LT SLL S +L QIH IIK G YS
Sbjct: 425 VRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVK 484
Query: 344 ------------NVPVCNAIL----QH-QAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
++ V NA+ QH + E +L+S + S+ KP+ TF ++ A +
Sbjct: 485 DARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAAS 544
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ASL G Q H ++K GL FV N L+DMY KCGS+ AR++FN DVV W+S
Sbjct: 545 NLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNS 604
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I +AQ G EEAL +FR M G++PN+VT V VL+ACSH G VE+GL + M +
Sbjct: 605 MISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-F 663
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
GI P E +CVV LL R+G++ EA++FI +M + +VW+SLL++C+ GNV++GK A
Sbjct: 664 GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYA 723
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
AE + DP +S + +LL NI+AS G W +V ++ M V K PG+SWIE+ K++
Sbjct: 724 AEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVN 782
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 172/625 (27%), Positives = 295/625 (47%), Gaps = 72/625 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D A V D + W + S +Q EAL+ F LQ + A +I
Sbjct: 78 VDNARVVFDKMPHKNLITWS-SMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVI 136
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
AC+ L ++ G ++H ++ S D + +++ Y K G++E+AR+VFD++ ++ V
Sbjct: 137 RACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAV 196
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+WT +IAG ++ G+ ++EL+ QM ++ ++PD++ S++ ACS L + G+Q+HA+V
Sbjct: 197 TWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 256
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
++ + N LI YTK +R+ +F + K+I SW +MI G+ + F
Sbjct: 257 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSF----- 311
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
W EAM LF EM PDG S+L +C S +L
Sbjct: 312 ---------DW--------------EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 348
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAIL----------------------------------- 352
QG Q+H+Y IK S+ V N ++
Sbjct: 349 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 408
Query: 353 -QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q + E LF M P +TF ++G A++ +LE+ Q+H I+K G++LD+F
Sbjct: 409 SQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLF 468
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
+ L+D+Y KC + AR +F M + D+V W+++ GY Q EEALKL+ ++ S
Sbjct: 469 AGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSR 528
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+PN T ++TA S++ + G Q + + + G+ + +VD+ A+ G + EA
Sbjct: 529 QKPNEFTFAALITAASNLASLRHGQQFHNQLV-KMGLDFCPFVTNALVDMYAKCGSIEEA 587
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYA 589
N + D+V W S++++ HG + ++K I P N V + + +
Sbjct: 588 RKMFNSSIW-RDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACS 645
Query: 590 SSGKWEEVARLMGSMKERGVRKVPG 614
+G+ E+ SM G++ PG
Sbjct: 646 HAGRVEDGLNHFNSMPGFGIK--PG 668
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 250/520 (48%), Gaps = 67/520 (12%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
N R + +A+L+ S + + +H I+ S Q D L N ++N+ K +++A
Sbjct: 22 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSG 193
R+VFD+MP +N+++W++M++ SQ G A+ ++V + +SG P++F S+IRAC+
Sbjct: 82 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 141
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L V G QLH V++S + +LI Y+K I +A VF ++ K +W
Sbjct: 142 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTW--- 198
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
TIIAG C + ++ LF++M + ++PD V
Sbjct: 199 -------------------------TTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVV 233
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-------QAG--------- 357
S+L AC+ L G QIH+Y++++G +V V N ++ +AG
Sbjct: 234 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVV 293
Query: 358 --------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
E +LF M KPD V+ +C + +LE G Q+
Sbjct: 294 KNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQV 353
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H Y +K L D FV NGL+DMY K L A+++F+ M + +V+S++++I GY+
Sbjct: 354 HAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKL 413
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
EAL+LF MR P+ +T V +L + + +E Q++ ++ ++G+ S
Sbjct: 414 SEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII-KFGVSLDLFAGSA 472
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++D+ ++ V +A +M + DIVVW ++ H
Sbjct: 473 LIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMFFGYTQH 511
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 322/623 (51%), Gaps = 75/623 (12%)
Query: 83 YADLISACSS---LRSLQLGRKVHDHILSSKCQ-PDAVLHNHILNMYGKCGSLEDARMVF 138
YA ++S+ + +++ VH IL + Q P L NH+L Y K G L AR VF
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 139 DEMP-------------------------------QRNVVSWTAMIAGCSQNGQENAAIE 167
DEMP +R+ VS+ A+I G S G +++
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131
Query: 168 LYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
LY +L + + P + T ++I S L LG +H V++ G++ + L+ MY
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIA 283
K I DA VF + K + + ++I G + ++ A+ +F M + +W T++
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G+ EA+ +F M + D T S+L AC + +L +G QIH+YI + +
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYED 311
Query: 344 NVPVCNAILQHQAG------------------------------------ELFRLFSLML 367
NV V +A++ + E R FS M
Sbjct: 312 NVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQ 371
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
KPD T V+ +CA +ASLE G Q HC + +GL + V N L+ +Y KCGS+
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A LF+ M D VSW++L+ GYAQFG +E + LF +M ++G++P+ VT +GVL+ACS
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACS 491
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
GLVE+G + MQ ++GI+P + +C++DL +R+GR EAE+FI QM D W
Sbjct: 492 RAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL+SC+ GN+++GK AAEN+L+ DP N A+ VLLC+++A+ G+W EVA L M++R
Sbjct: 552 ATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDR 611
Query: 608 GVRKVPGQSWIEIQTKIHASGND 630
V+K PG SWI+ + K+H D
Sbjct: 612 QVKKEPGCSWIKYKNKVHIFSAD 634
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 187/442 (42%), Gaps = 99/442 (22%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP+ T + +I S+L LG VH +L A + + +++MY K G + DAR
Sbjct: 142 VRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDAR 201
Query: 136 MVFDEMPQRNVV-------------------------------SWTAMIAGCSQNGQENA 164
VF EM + VV +WT M+ G +QNG +
Sbjct: 202 RVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLE 261
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A++++ +M G+ DQ+TFGSI+ AC L + G+Q+HA++ ++ + ++ +AL+
Sbjct: 262 ALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVD 321
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY+K I A VF + ++I SW +MI G+ G
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGY--------------------------G 355
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+CS EA+ FSEM + PD T+ S++ +C + SL +G Q H + G
Sbjct: 356 QNACS--EEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 345 VPVCNAILQ------------------------------------HQAGELFRLFSLMLA 368
+ V NA++ +A E LF MLA
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLA 473
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLG 427
+ KPD +TF V+ AC+ +E G + K G+ ++D+Y + G
Sbjct: 474 NGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFK 533
Query: 428 SARELFNFM-EDPDVVSWSSLI 448
A E M PD W++L+
Sbjct: 534 EAEEFIKQMPHSPDAFGWATLL 555
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 37/375 (9%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C +++ A + + R W + + L + L EAL F ++ I T+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWT-TMVTGLTQNGLQLEALDVFRRMRAE-GVGIDQYTFG 282
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC +L +L+ G+++H +I + + + + + +++MY KC S+ A VF M R
Sbjct: 283 SILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N++SWTAMI G QN A+ + +M G+ PD FT GS+I +C+ L + G Q H
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ S ++ NAL+ +Y K I DA +F ++ D SW +++ G+++
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQF---- 458
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
A E + LF +M L PDG+T +L AC+
Sbjct: 459 ------------------------GKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG 494
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ +G + K + VP+ C L ++G + PD +
Sbjct: 495 LVEKGCDYFDSMQKD--HGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552
Query: 380 DVMGACAAMASLEMG 394
++ +C ++E+G
Sbjct: 553 TLLSSCRLRGNMEIG 567
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 330/602 (54%), Gaps = 65/602 (10%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
+ AL FD +Q + T A L++ACS++ L+ G+++H ++L + D ++
Sbjct: 226 DRALGIFDEMQL-SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS 284
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+L++Y K G +E+A +FD + NVV W M+ Q + +++ +ML +G+ P+
Sbjct: 285 LLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPN 344
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+FT+ ++R C+ +GLG Q+H+ IK+ S + LI MY+K+ + A +
Sbjct: 345 KFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD 404
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
I KD+ SW SMI G+ + +F + EA+ F E
Sbjct: 405 MIEEKDVVSWTSMIAGYVQHEFCK----------------------------EALETFKE 436
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------- 351
M + PD + + S + AC +++QG QIH+ + G+ ++V + N +
Sbjct: 437 MQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGI 496
Query: 352 ----------LQHQAG-----------------ELFRLFSLMLASQTKPDHITFNDVMGA 384
++H+ G E ++F M + K + TF + A
Sbjct: 497 SKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISA 556
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
A +A ++ G Q+H ++KTG + + N L+ +Y KCGS+ A+ F M + VSW
Sbjct: 557 SANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSW 616
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+++I +Q G G EAL LF +M+ G++P+ VT VGVLTACSHVGLVEEGL ++ M N
Sbjct: 617 NTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSN 676
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
E+GI P + +CVVD+L RAG++ A+ F+ +M D +VW++LL++CK H N+++G+
Sbjct: 677 EHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGE 736
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
AA+++L+++P +SA+ VLL N YA +GKW ++ MK+RGVRK PG+SWIE++ +
Sbjct: 737 FAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVV 796
Query: 625 HA 626
HA
Sbjct: 797 HA 798
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 266/598 (44%), Gaps = 118/598 (19%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC-SSLRSLQLGRKVHDHILS 108
LF++ C+Q + L A DF A + AC S R L ++H +
Sbjct: 28 LFAAKCRQYM---VLGAVDF--------------ACALRACRGSGRRWPLVPEIHAKAII 70
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
++ N ++++Y K G + AR VF+E+ R+ VSW A+++G +QNG A+ L
Sbjct: 71 CGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRL 130
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
Y +M +SG++P + SI+ AC+ LGR +H V K S NALI++Y +
Sbjct: 131 YREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLR 190
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
A VF +M + ++NT+I+G A C
Sbjct: 191 ----------------------------CRSFRLADRVFCDMLYCDSVTFNTLISGHAQC 222
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------- 341
+ + A+ +F EM L PD +T+ SLL AC++ L +G Q+HSY++K G
Sbjct: 223 GHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIME 282
Query: 342 ------------------------YSNVPVCNAIL--QHQAGEL---FRLFSLMLASQTK 372
+NV + N +L Q +L F +F MLA+ +
Sbjct: 283 GSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVR 342
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ T+ ++ C + +G Q+H +K G D++V L+DMY K G L A+ +
Sbjct: 343 PNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRI 402
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
+ +E+ DVVSW+S+I GY Q +EAL+ F+ M++ G+ P+++ L ++AC+ + V
Sbjct: 403 LDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAV 462
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+G Q++ RV+ + + D+ +W L+
Sbjct: 463 HQGSQIH--------------------------ARVYVS-------GYSADVSIWNGLVY 489
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
+ + K A + I+ L + +A SG +EE ++ M + G +
Sbjct: 490 ---LYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAK 544
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 311/597 (52%), Gaps = 75/597 (12%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RI S Y L+ C R +H HI+ + D + ++N+Y KCG +E A
Sbjct: 55 RIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHK 114
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD +P+RNV +WT ++ G QN A++L+++ML++G P +T G ++ ACS L
Sbjct: 115 VFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQS 174
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G+Q+HA++IK N+L + Y+KF R
Sbjct: 175 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRR------------------------- 209
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
L+FA F ++ ++ SW ++I+ A ++S F +M + P+ T+ S+
Sbjct: 210 ---LEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSV 266
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------ 352
L AC L+L G QIHS IK G+ S++ + N+I+
Sbjct: 267 LSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNL 326
Query: 353 ----------------------QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMA 389
H++G +F + S KPD TF+ V+ C+ +
Sbjct: 327 VTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLV 386
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+LE G Q+H I+K+G+ DV V L+ MY KCGS+ A + F M ++SW+S+I
Sbjct: 387 ALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMIT 446
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
G+A+ G ++AL+LF MR G++PN VT VGVL+ACSH GL +E L + +MQ +Y I
Sbjct: 447 GFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIK 506
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
P + +C++D+ R GRV EA D +++M F+ + +W L+A C++HG D+G AAE
Sbjct: 507 PVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQ 566
Query: 570 ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+LK+ P + V L N++ S+G+W++V+++ MKE V K+ SWI I+ K+++
Sbjct: 567 LLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYS 623
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/615 (34%), Positives = 340/615 (55%), Gaps = 29/615 (4%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
+D+A V D + + W + + K +L F+ + + + P Y +
Sbjct: 193 IDKARLVFDGLVLKTPVTWT-AIITGYTKSGRSEVSLQLFNLMMESN---VIPDKYVLSS 248
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+++ACS L L+ G+++H ++L S+ + D +N +++ Y KCG ++ + +FD + +N
Sbjct: 249 ILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKN 308
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
++SWT MIAG QN + A+EL +M + G PD++ S++ +C + + GRQ+H+
Sbjct: 309 IISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHS 368
Query: 206 HVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF- 262
+VIK EH + + NALI MY+K + + DA VF + + + +MI+G+S+ +
Sbjct: 369 YVIKVCLEHDNFV--TNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYL 426
Query: 263 --ARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
A VF EM SP+ ++ +++ A+ + + + D T +L
Sbjct: 427 CGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSAL 486
Query: 317 L-----CACTSPLS-LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
+ C+C +++G ++ +S LQ ++ E F+L+S + S+
Sbjct: 487 IDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYN-----LQLKSEEAFKLYSDLQLSR 541
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+P+ TF + A + +ASL G Q H +MK GL D F+ N L+DMY KCGS+ A
Sbjct: 542 ERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAE 601
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
++F+ D W+S+I YAQ G EEAL++F M S+ + PN+VT V VL+ACSHVG
Sbjct: 602 KIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVG 661
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
VE+GLQ Y M YGI P E + VV LL RAGR+ EA +FI +M +VW+SL
Sbjct: 662 FVEDGLQHYNSMA-RYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSL 720
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L++C+ GNV++ K AAE + IDP +S + V+L NI+AS G W +V RL M GV
Sbjct: 721 LSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVV 780
Query: 611 KVPGQSWIEIQTKIH 625
K PGQSWIE+ ++H
Sbjct: 781 KEPGQSWIEVNGEVH 795
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 185/654 (28%), Positives = 303/654 (46%), Gaps = 84/654 (12%)
Query: 9 CHLPRWCCEYWDAFELCMLLD---QAGEVVDSFLRRFDDIWDFDLFS-----SLCKQNLY 60
C + W +Y D F +LL + G V D+ FD + + +L S S+ Q Y
Sbjct: 64 CQVVLWGLQY-DVFLSNLLLHSYFKIGSVFDAG-TLFDKMPNRNLVSWSSVVSMYTQLGY 121
Query: 61 NE-ALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
NE AL+ F Q ++ A +I AC + G +VH +++ S D +
Sbjct: 122 NEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGT 181
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++ +Y K G ++ AR+VFD + + V+WTA+I G +++G+ +++L+ M++S ++P
Sbjct: 182 SLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIP 241
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D++ SI+ ACS L + G+Q+HA+V++SE + + N LI YTK R+ +F
Sbjct: 242 DKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALF 301
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ K+I SW +MI G+ + N W EA+ L
Sbjct: 302 DRLDVKNIISWTTMIAGYMQ--------------NSYDW--------------EAVELVG 333
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK-----KGFYSN---------- 344
EM PD S+L +C S +L G QIHSY+IK F +N
Sbjct: 334 EMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCN 393
Query: 345 ----------VPVCNAILQHQA--------GEL---FRLFSLMLASQTKPDHITFNDVMG 383
V C++++ + A G L +F M P +TF ++G
Sbjct: 394 ALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLG 453
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
AA+ L++ Q+H I+K G +LD F + L+D+Y KC + AR +F + D+V
Sbjct: 454 LSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVV 513
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIM 502
W+SL GY EEA KL+ ++ S RPN T + TA S + + G Q + ++M
Sbjct: 514 WNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVM 573
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ G+ + +VD+ A+ G V EAE + + D W S+++ HG V+
Sbjct: 574 K--MGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVW-KDTACWNSMISMYAQHGKVEE 630
Query: 563 GKRAAENIL--KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
R E ++ I+P N V + + + G E+ + SM G+ PG
Sbjct: 631 ALRMFETMVSNNINP-NYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIE--PG 681
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 251/520 (48%), Gaps = 71/520 (13%)
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
++ N +++ A+L+ A S +S+ RKVH ++ Q D L N +L+ Y K GS+
Sbjct: 32 SSQNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSV 91
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRA 190
DA +FD+MP RN+VSW+++++ +Q G A+ +++ ++ + +++ SIIRA
Sbjct: 92 FDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRA 151
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C G Q+H++VIKS G + +L+ +Y K I A VF + K +W
Sbjct: 152 CVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTW 211
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
++I G++K + ++ LF+ M + +IPD
Sbjct: 212 TAIITGYTK----------------------------SGRSEVSLQLFNLMMESNVIPDK 243
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-------QAG------ 357
+ S+L AC+ L G QIH+Y+++ +V N ++ +AG
Sbjct: 244 YVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDR 303
Query: 358 -----------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
E L M KPD + V+ +C ++ +L+ G
Sbjct: 304 LDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHG 363
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
Q+H Y++K L D FV N L+DMY KC +L A+ +F+ + VV ++++I GY++
Sbjct: 364 RQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQ 423
Query: 455 G--CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G CG AL++F+ MR V P+ +T V +L + + ++ Q++ ++ +YG +
Sbjct: 424 GYLCG--ALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLII-KYGFSLDK 480
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S ++D+ ++ + +A ++ + + DIVVW SL +
Sbjct: 481 FTSSALIDVYSKCSCIRDAR-YVFEGTTNKDIVVWNSLFS 519
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 206/642 (32%), Positives = 345/642 (53%), Gaps = 70/642 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C L +A E+ ++ +R W+ + + ++ EA+ + +Q+ ++P
Sbjct: 430 YARCGDLPRARELFNTMPKRDLISWN-AIIAGYARREDRGEAMKLYKQMQSEG---VKPG 485
Query: 82 --TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ L+SAC++ + G+ +H+ IL S + + L N ++NMY +CGS+ +A+ VF+
Sbjct: 486 RVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFE 545
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
R+++SW +MIAG +Q+G AA +L+++M + GL PD+ TF S++ C + L
Sbjct: 546 GTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALEL 605
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GRQ+H +I+S + NALI MY + + DA+ VF S+ +
Sbjct: 606 GRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR-------------- 651
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
N+ SW +I G A +A LF +M + P T S+L A
Sbjct: 652 --------------NVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKA 697
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELF---RLF----------- 363
C S L +G ++ ++I+ G+ + V NA++ ++G + ++F
Sbjct: 698 CMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSW 757
Query: 364 ---------------SLMLASQTKPDHITFND-----VMGACAAMASLEMGTQLHCYIMK 403
+L A Q + + N ++ AC++ ++LE G ++H I+K
Sbjct: 758 NKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVK 817
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+ DV V L+ MY KCGSL A+E+F+ + +VV+W+++I YAQ G +AL
Sbjct: 818 RKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDF 877
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M G++P+ T +L+AC+H GLV EG +++ +++++G+ PT E C+V LL
Sbjct: 878 FNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLG 937
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAGR EAE INQM F D VW++LL +C+ HGNV + + AA N LK++ N A VL
Sbjct: 938 RAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVL 997
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N+YA++G+W++VA++ M+ RG+RK PG+SWIE+ IH
Sbjct: 998 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIH 1039
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 275/578 (47%), Gaps = 78/578 (13%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
F C + A + +++F R D + L ++L + Y EA + + + + +
Sbjct: 329 FVRCGDVAGAKQALEAFADR-DVVVYNALIAALAQHGHYEEAFEQY-YQMRSDGVVMNRT 386
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY +++ACS+ ++L G +H HI D + N +++MY +CG L AR +F+ M
Sbjct: 387 TYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTM 446
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+++SW A+IAG ++ A++LY QM G+ P + TF ++ AC+ G+
Sbjct: 447 PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H +++S S+ NAL+ MY + I++A NVF +DI SW SM
Sbjct: 507 MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSM-------- 558
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
IAG A + A LF EM L PD +T S+L C
Sbjct: 559 --------------------IAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCK 598
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------------- 352
+P +L G QIH II+ G +V + NA++
Sbjct: 599 NPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTA 658
Query: 353 -------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
Q + + F LF M KP TF+ ++ AC + A L+ G ++ +I+ +G
Sbjct: 659 MIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSG 718
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
LD V N L+ Y K GS+ AR++F+ M + D++SW+ +I GYAQ G G AL+
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAY 778
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-----RIMQNEYGIIPTRERRSCVVD 520
+M+ GV N + V +L ACS +EEG +++ R MQ + + + ++
Sbjct: 779 QMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRV------GAALIS 832
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ A+ G + EA++ + + ++V W +++ + HG
Sbjct: 833 MYAKCGSLEEAQEVFDNFT-EKNVVTWNAMINAYAQHG 869
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 271/532 (50%), Gaps = 73/532 (13%)
Query: 76 FRIRPS-----TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS 130
++ RP+ Y DL+ C+ RSL +++H ++ + PD L N ++NMY KC S
Sbjct: 73 YQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRS 132
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
+ DA VF +MP+R+V+SW ++I+ +Q G + A +L+ +M +G +P + T+ SI+ A
Sbjct: 133 VSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTA 192
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C + G+++H+ +I++ + QN+L+ MY K + + A VFS I R+D+
Sbjct: 193 CCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVV-- 250
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
S+NT++ A + E + LF +M + PD
Sbjct: 251 --------------------------SYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDK 284
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----------HQAGEL 359
+T +LL A T+P L +G +IH + +G S++ V A+ QA E
Sbjct: 285 VTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEA 344
Query: 360 FR-----LFSLMLAS---------------QTKPDHITFN-----DVMGACAAMASLEMG 394
F +++ ++A+ Q + D + N V+ AC+ +L G
Sbjct: 345 FADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG 404
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+H +I + G + DV + N L+ MY +CG L ARELFN M D++SW+++I GYA+
Sbjct: 405 ELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARR 464
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRE 513
EA+KL+++M+S GV+P VT + +L+AC++ +G ++ I+++ GI
Sbjct: 465 EDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS--GIKSNGH 522
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
+ ++++ R G + EA++ + + DI+ W S++A HG+ + +
Sbjct: 523 LANALMNMYRRCGSIMEAQN-VFEGTRARDIISWNSMIAGHAQHGSYEAAYK 573
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 185/458 (40%), Gaps = 102/458 (22%)
Query: 132 EDARMVFDEMP-QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
ED + P + N ++ ++ C++ A ++ QM+++G+ PD F
Sbjct: 67 EDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFL------- 119
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
N LI MY K + DA VF + R+D+ SW
Sbjct: 120 ----------------------------SNLLINMYVKCRSVSDAHQVFLKMPRRDVISW 151
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
S+I +++ F + F LF EM IP
Sbjct: 152 NSLISCYAQQGFKKKAFQ----------------------------LFEEMQTAGFIPSK 183
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR- 361
+T S+L AC SP L G +IHS II+ G+ + V N++L A ++F
Sbjct: 184 ITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSG 243
Query: 362 ---------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
LF M + PD +T+ +++ A + L+ G
Sbjct: 244 IYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG 303
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
++H + GL D+ V L M+V+CG + A++ D DVV +++LI AQ
Sbjct: 304 KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQH 363
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G EEA + + +MRS GV N T + VL ACS + G +L +E G +
Sbjct: 364 GHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG-ELIHSHISEVGHSSDVQI 422
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ ++ + AR G + A + N M D++ W +++A
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIA 459
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 33/246 (13%)
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
QH+ E L + T+ + + D++ C SL ++H +++ G+ D+F+
Sbjct: 60 QHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFL 119
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L++MYVKC S+ A ++F M DV+SW+SLI YAQ G ++A +LF M+++G
Sbjct: 120 SNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGF 179
Query: 473 RPNHVTLVGVLTACS-----------HVGLVEEGLQLYRIMQNE----YGI---IPTRE- 513
P+ +T + +LTAC H ++E G Q +QN YG +P+
Sbjct: 180 IPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQ 239
Query: 514 ------RRSCV-----VDLLARAGRVHEAEDFINQMAFD---DDIVVWKSLLASCKTHGN 559
RR V + L A+ V E QM+ + D V + +LL + T
Sbjct: 240 VFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSM 299
Query: 560 VDVGKR 565
+D GKR
Sbjct: 300 LDEGKR 305
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 314/604 (51%), Gaps = 76/604 (12%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RI S Y L+ C R +H HI+ + D + ++N+Y KCG +E A
Sbjct: 61 RIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHK 120
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD +P+RNV +WT ++ G QN A++L+++ML++G P +T G ++ ACS L
Sbjct: 121 VFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQS 180
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G+Q+HA++IK N+L + Y+KF R
Sbjct: 181 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRR------------------------- 215
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
L+FA F ++ ++ SW ++I+ A ++S F +M + P+ T+ S+
Sbjct: 216 ---LEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSV 272
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------ 352
L AC L+L G QIHS IK G+ S++ + N+I+
Sbjct: 273 LSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNL 332
Query: 353 ----------------------QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMA 389
H++G +F + S KPD TF+ V+ C+ +
Sbjct: 333 VTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLV 392
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+LE G Q+H I+K+G+ DV V L+ MY KCGS+ A + F M ++SW+S+I
Sbjct: 393 ALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMIT 452
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
G+A+ G ++AL+LF MR G++PN VT VGVL+ACSH GL +E L + +MQ +Y I
Sbjct: 453 GFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIK 512
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
P + +C++D+ R GRV EA D +++M F+ + +W L+A C++HG D+G AAE
Sbjct: 513 PVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQ 572
Query: 570 ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SG 628
+LK+ P + V L N++ S+G+W++V+++ MKE V K+ SWI I+ K+++
Sbjct: 573 LLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKP 632
Query: 629 NDIS 632
ND S
Sbjct: 633 NDKS 636
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 318/581 (54%), Gaps = 64/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + L++AC+SL LQ G ++H ++ + D ++ +L++Y KCG +E A ++F+
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ NVV W M+ Q + EL+ QM +G+ P+QFT+ I+R C+ + LG
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H+ +K+ S + LI MY+K+ W L+
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKY-----GW-----------------------LE 397
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR V ++ ++ SW ++IAG +A++ F EM + PD + + S + C
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------LQH-------- 354
++ QG+QIH+ I G+ +V + NA+ ++H
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
Query: 355 ------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
Q+G E ++F M S K + TF + A A +A ++ G Q+H ++KTG
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ + V N L+ +Y KCGS A+ F+ M + + VSW+++I +Q G G EAL LF
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFD 637
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ G++PN VT +GVL ACSHVGLVEEGL ++ M +EYGI P + +CV+D+ RA
Sbjct: 638 QMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRA 697
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ A+ FI +M D +VW++LL++CK H N++VG+ AA+++L+++P +SA+ VLL
Sbjct: 698 GQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLS 757
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N YA + KW ++ M++RGVRK PG+SWIE++ +HA
Sbjct: 758 NAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHA 798
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 247/518 (47%), Gaps = 71/518 (13%)
Query: 80 PSTYADLISAC-SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
P +A + AC + R Q+ ++H ++ ++ N ++++Y K G + AR VF
Sbjct: 41 PLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF 100
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+E+ R+ VSW AM++G +QNG A+ LY QM ++G++P + S++ +C+
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFA 160
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GR +HA K S + NA+I +Y + A VF + +D
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTV---------- 210
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++NT+I+G A C + A+ +F EM L PD +T+ SLL
Sbjct: 211 ------------------TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLA 252
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYS-------------------------------NVPV 347
AC S L +G Q+HSY+ K G S NV +
Sbjct: 253 ACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVL 312
Query: 348 CNAILQ-----HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
N +L + + F LF M A+ +P+ T+ ++ C +++G Q+H +
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KTG D++V L+DMY K G L AR + +++ DVVSW+S+I GY Q C ++AL
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY-GIIPTRERRSCVVD 520
F+ M+ G+ P+++ L ++ C+ + + +GLQ++ RI + Y G + + +V+
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI---WNALVN 489
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
L AR GR+ EA ++ D+I W L++ G
Sbjct: 490 LYARCGRIREAFSSFEEIEHKDEI-TWNGLVSGFAQSG 526
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 241/516 (46%), Gaps = 68/516 (13%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P + ++S+C+ GR +H + + N ++ +Y +CGS A VF
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+MP R+ V++ +I+G +Q G A+E++ +M SGL PD T S++ AC+ L +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G QLH+++ K+ S I + +L+ +Y K + A +F+S R ++ W M+ F +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
++ +LA ++ LF +M + P+ T +L
Sbjct: 323 IN------------DLA----------------KSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
CT + G QIHS +K GF S++ V ++
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 353 --------QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
QH+ + F M PD+I + CA + ++ G Q+H I
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + DV + N L+++Y +CG + A F +E D ++W+ L+ G+AQ G EEALK+
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLL 522
F RM SGV+ N T V L+A +++ +++G Q++ R+++ + E + ++ L
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF--ETEVGNALISLY 592
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G +A+ ++M+ + + V W +++ SC HG
Sbjct: 593 GKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H + GL V N L+D+Y K G + AR +F + D VSW +++ GYAQ G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG-------------------- 495
GEEAL L+R+M +GV P L VL++C+ L +G
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 496 --LQLY------RIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFD---D 542
+ LY R+ + + +P R+ + ++ A+ G A + +M F
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILK 572
D V SLLA+C + G++ G + + K
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFK 272
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/647 (31%), Positives = 353/647 (54%), Gaps = 43/647 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C + +V D R W+ + S+ + +N+ALV F +Q + ++
Sbjct: 319 DMYAKCDDEESCLKVFDEMGERNQVTWN-SIISAEAQFGHFNDALVLFLRMQE-SGYKSN 376
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
++ A + L + GR++H H++ + D +L + +++MY KCG +E+A VF
Sbjct: 377 RFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFR 436
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVG 198
+ +RN VS+ A++AG Q G+ A+ELY M + G+ PDQFTF +++ C+
Sbjct: 437 SLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDN 496
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GRQ+HAH+I++ ++I + L+ MY++ R+ A +F+ +A ++ SW SMI+G+
Sbjct: 497 QGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQ 556
Query: 259 K---LDFARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
+ A +F +M+ P+ S +++++ S S++ + L + + + +G+
Sbjct: 557 QNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 616
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFY---------------------------SN 344
L+ S+ +++ IKK N
Sbjct: 617 LQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRN 676
Query: 345 VPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ N+IL A E F F ML S + D +T ++ C+++ +LE G QLH
Sbjct: 677 TALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHS 736
Query: 400 YIMKTGLA-LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
I+K G V + L+DMY KCG++ AR +F+ M ++VSW+++I GY++ GC +
Sbjct: 737 LIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSK 796
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EAL L+ M G+ PN VT + +L+ACSH GLVEEGL+++ MQ +Y I E +C+
Sbjct: 797 EALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCM 856
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VDLL RAGR+ +A++F+ +M + ++ W +LL +C+ H ++D+G+ AA+ + ++DP N
Sbjct: 857 VDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNP 916
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
V++ NIYA++G+W+EV + MK +GV+K PG SWIEI ++I
Sbjct: 917 GPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQ 963
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 150/595 (25%), Positives = 274/595 (46%), Gaps = 100/595 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A + C +LRS G++VH +++ + D + N +++MY KC E VFDEM
Sbjct: 278 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 337
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+RN V+W ++I+ +Q G N A+ L+++M +SG ++F GSI+ A +GL +G GR
Sbjct: 338 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGR 397
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+LH H++++ S +I +AL+ MY+K + +A VF S+ +
Sbjct: 398 ELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLER---------------- 441
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCAC 320
N S+N ++AG A EA+ L+ +M + I PD T +LL C
Sbjct: 442 ------------NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLC 489
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------ 360
+ + QG QIH+++I+ N+ V ++ + A E+F
Sbjct: 490 ANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWN 549
Query: 361 ----------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
RLF M + KPD + + ++ +C +++ + G +LH +I++
Sbjct: 550 SMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609
Query: 405 GLALDVFVMNGLMDMYVKCGSL-------------------------------GSARELF 433
+ + + L+DMY KCGS+ A+ LF
Sbjct: 610 TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLF 669
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ ME + W+S++ GYA G +E+ F M S + + +T+V ++ CS + +E
Sbjct: 670 DQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALE 729
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
G QL+ ++ + + + + +VD+ ++ G + +A + M +IV W ++++
Sbjct: 730 HGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMN-GKNIVSWNAMISG 788
Query: 554 CKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
HG E + K + P N + + + + +G EE R+ SM+E
Sbjct: 789 YSKHGCSKEALILYEEMPKKGMYP-NEVTFLAILSACSHTGLVEEGLRIFTSMQE 842
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/587 (27%), Positives = 271/587 (46%), Gaps = 88/587 (14%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED---A 134
+ P Y+ LI C S Q G+ +H ++S+ PDA L IL +Y + G L+D A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R +F+EMP+RN+ +W MI ++ + LY +M SG D+FTF S+I+AC +
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+G RQL + V+K+ +L AL+ Y +F G M
Sbjct: 189 EDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARF---------------------GWMD 227
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
D + LD E+E ++ +WN +IAG + EA +F M + PD T
Sbjct: 228 DAVTSLD-------EIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFA 280
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------ 356
S L C + S G Q+HS +I GF + V NA++ A
Sbjct: 281 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 340
Query: 357 ------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+ LF M S K + ++ A A +A + G +LH
Sbjct: 341 NQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELH 400
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
++++ L D+ + + L+DMY KCG + A ++F + + + VS+++L+ GY Q G E
Sbjct: 401 GHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAE 460
Query: 459 EALKLFRRMRSS-GVRPNHVTLVGVLTACSHVGLVEEGLQLY------RIMQNEYGIIPT 511
EAL+L+ M+S G++P+ T +LT C++ +G Q++ I +N II
Sbjct: 461 EALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN---IIVE 517
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG----KRAA 567
E +V + + GR++ A++ N+MA + + W S++ + +G K+
Sbjct: 518 TE----LVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLM--GSMKERGVRKV 612
N +K D + ++++ C + S K E+ + +M+E G+ +V
Sbjct: 573 LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV 619
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 318/581 (54%), Gaps = 64/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + L++AC+SL LQ G ++H ++ + D ++ +L++Y KCG +E A ++F+
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ NVV W M+ Q + EL+ QM +G+ P+QFT+ I+R C+ + LG
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H+ +K+ S + LI MY+K+ W L+
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKY-----GW-----------------------LE 397
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR V ++ ++ SW ++IAG +A++ F EM + PD + + S + C
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------LQH-------- 354
++ QG+QIH+ I G+ +V + NA+ ++H
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
Query: 355 ------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
Q+G E ++F M S K + TF + A A +A ++ G Q+H ++KTG
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ + V N L+ +Y KCGS A+ F+ M + + VSW+++I +Q G G EAL LF
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFD 637
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ G++PN VT +GVL ACSHVGLVEEGL ++ M +EYGI P + +CV+D+ RA
Sbjct: 638 QMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRA 697
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ A+ FI +M D +VW++LL++CK H N++VG+ AA+++L+++P +SA+ VLL
Sbjct: 698 GQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLS 757
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N YA + KW ++ M++RGVRK PG+SWIE++ +HA
Sbjct: 758 NAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHA 798
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 247/518 (47%), Gaps = 71/518 (13%)
Query: 80 PSTYADLISAC-SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
P +A + AC + R Q+ ++H ++ ++ N ++++Y K G + AR VF
Sbjct: 41 PLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF 100
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+E+ R+ VSW AM++G +QNG A+ LY QM ++G++P + S++ +C+
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFA 160
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GR +HA K S + NA+I +Y + A VF + +D
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTV---------- 210
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++NT+I+G A C + A+ +F EM L PD +T+ SLL
Sbjct: 211 ------------------TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLA 252
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYS-------------------------------NVPV 347
AC S L +G Q+HSY+ K G S NV +
Sbjct: 253 ACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVL 312
Query: 348 CNAILQ-----HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
N +L + + F LF M A+ +P+ T+ ++ C +++G Q+H +
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KTG D++V L+DMY K G L AR + +++ DVVSW+S+I GY Q C ++AL
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY-GIIPTRERRSCVVD 520
F+ M+ G+ P+++ L ++ C+ + + +GLQ++ RI + Y G + + +V+
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI---WNALVN 489
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
L AR GR+ EA ++ D+I W L++ G
Sbjct: 490 LYARCGRIREAFSSFEEIEHKDEI-TWNGLVSGFAQSG 526
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 241/516 (46%), Gaps = 68/516 (13%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P + ++S+C+ GR +H + + N ++ +Y +CGS A VF
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+MP R+ V++ +I+G +Q G A+E++ +M SGL PD T S++ AC+ L +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G QLH+++ K+ S I + +L+ +Y K + A +F+S R ++ W M+ F +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
++ +LA ++ LF +M + P+ T +L
Sbjct: 323 IN------------DLA----------------KSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
CT + G QIHS +K GF S++ V ++
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 353 --------QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
QH+ + F M PD+I + CA + ++ G Q+H I
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + DV + N L+++Y +CG + A F +E D ++W+ L+ G+AQ G EEALK+
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLL 522
F RM SGV+ N T V L+A +++ +++G Q++ R+++ + E + ++ L
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF--ETEVGNALISLY 592
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G +A+ ++M+ + + V W +++ SC HG
Sbjct: 593 GKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H + GL V N L+D+Y K G + AR +F + D VSW +++ GYAQ G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG-------------------- 495
GEEAL L+R+M +GV P L VL++C+ L +G
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 496 --LQLY------RIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFD---D 542
+ LY R+ + + +P R+ + ++ A+ G A + +M F
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILK 572
D V SLLA+C + G++ G + + K
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFK 272
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 207/584 (35%), Positives = 314/584 (53%), Gaps = 71/584 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY ++S +SL L+LG+++H ++ + N +NMY K GS+ AR +F +M
Sbjct: 299 TYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQM 358
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL---CCVG 198
+ +++SW +I+GC+++G E ++ L++ +L+SGL+PDQFT S++RACS L CVG
Sbjct: 359 KEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVG 418
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
RQ+H +K+ +LD+ F S A D+ S G
Sbjct: 419 --RQVHTCALKA-------------------GIVLDS---FVSTALIDVYSKGG------ 448
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
K++ A +F+ + +LASWN ++ G N EA+ LFS M +R D +T +
Sbjct: 449 KMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAK 508
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------------ 354
A + L QG QIH+ +IK F+ ++ V + IL
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA 568
Query: 355 ---------QAGE----LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ GE LF + LA +PD TF ++ AC+ + +LE G Q+H I
Sbjct: 569 WTTVISGCVENGEEEQALFTYHQMRLAG-VQPDEYTFATLVKACSLLTALEQGKQIHANI 627
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
MK A D FVM L+DMY KCG++ A LF M V W+++IVG AQ G EEAL
Sbjct: 628 MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEAL 687
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
F M+S GV P+ VT +GVL+ACSH GL + + + MQ YG+ P E SC+VD
Sbjct: 688 NFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDA 747
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L+RAG + EAE ++ M F+ ++++LL +C+ G+ + G+R AE + +DP++SAA
Sbjct: 748 LSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAY 807
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL NIYA++ +WE MK V+K PG SWI+++ K+H
Sbjct: 808 VLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVH 851
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/593 (24%), Positives = 262/593 (44%), Gaps = 104/593 (17%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
+EA F L+ + R T + L C S + + + Q D +
Sbjct: 104 HEAFHIFRLLRQSVMLTTR-HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGA 162
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++N+Y K + +AR++FD MP R+VV W M+ + G + + L+ +SGL PD
Sbjct: 163 LVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Query: 181 QFTFGSIIRACSGLCCVGLGR---------QLHAHVIK---SEHGSHLISQNALIAMYTK 228
+ +I+ +G+G+ Q+ A+ K + S + N ++ Y +
Sbjct: 223 CVSVRTIL--------MGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQ 274
Query: 229 FDRILDAWNVFSSIARKDIT--------------------------------SW------ 250
+A + F + + + W
Sbjct: 275 AGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSV 334
Query: 251 -GSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
S I+ + K +++AR +F +M+ +L SWNT+I+G A ++ LF ++ L
Sbjct: 335 ANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGL 394
Query: 307 IPDGLTVRSLLCACTSPLSLY-QGMQIHSYIIKKGFYSNVPVCNAIL------------- 352
+PD T+ S+L AC+S Y G Q+H+ +K G + V A++
Sbjct: 395 LPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE 454
Query: 353 ---QHQAG--------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+Q G E RLFSLM K D ITF + A +
Sbjct: 455 LLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLV 514
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
L+ G Q+H ++K D+FV++G++DMY+KCG + SAR++FN + PD V+W+++I
Sbjct: 515 RLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVIS 574
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGI 508
G + G E+AL + +MR +GV+P+ T ++ ACS + +E+G Q++ IM+
Sbjct: 575 GCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAF 634
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
P + +VD+ A+ G + +A +M + +W +++ HGN +
Sbjct: 635 DPF--VMTSLVDMYAKCGNIEDAYGLFRRMN-TRSVALWNAMIVGLAQHGNAE 684
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 228/477 (47%), Gaps = 54/477 (11%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ--RNVVSWTAMI 153
L LG++ H I++S PD + N+++ MY KCGSL AR +FD PQ R++V++ A++
Sbjct: 29 LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88
Query: 154 AGCSQNGQ------ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
A + G+ + A ++ + QS ++ + T + + C L +
Sbjct: 89 AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA 148
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+K + AL+ +Y KF RI +A R +F
Sbjct: 149 VKIGLQWDVFVAGALVNIYAKFQRIREA----------------------------RVLF 180
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
+ M ++ WN ++ +E + LFS L PD ++VR++L
Sbjct: 181 DRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE 240
Query: 328 QGM-QIHSYIIKKGF---YSNVPVCNAILQH--QAGELFRL---FSLMLASQTKPDHITF 378
+ + Q+ +Y K S+V V N L QAGE + F M+ S+ D +T+
Sbjct: 241 RELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTY 300
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++ A++ LE+G Q+H +++ G V V N ++MYVK GS+ AR +F M++
Sbjct: 301 IVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKE 360
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D++SW+++I G A+ G E +L+LF + SG+ P+ T+ VL ACS +EE +
Sbjct: 361 VDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCV 417
Query: 499 YRIMQN---EYGIIPTRERRSCVVDLLARAGRVHEAE-DFINQMAFDDDIVVWKSLL 551
R + + GI+ + ++D+ ++ G++ EAE F NQ F D+ W +++
Sbjct: 418 GRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMM 472
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 29/262 (11%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
Y EAL F + + T+A+ A L LQ G+++H ++ + D + +
Sbjct: 481 YREALRLFSLMHERGE-KADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVIS 539
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
IL+MY KCG ++ AR VF+++P + V+WT +I+GC +NG+E A+ Y QM +G+ P
Sbjct: 540 GILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQP 599
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D++TF ++++ACS L + G+Q+HA+++K +L+ MY K I DA+ +F
Sbjct: 600 DEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLF 659
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ + + W +M I G+A NA EA++ F+
Sbjct: 660 RRMNTRSVALWNAM----------------------------IVGLAQHGNAEEALNFFN 691
Query: 300 EMGDRELIPDGLTVRSLLCACT 321
EM R + PD +T +L AC+
Sbjct: 692 EMKSRGVTPDRVTFIGVLSACS 713
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 138/349 (39%), Gaps = 47/349 (13%)
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLF--SEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
+P+ N +I A C + A LF + DR+L+ T ++L A L+
Sbjct: 45 NPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLV----TYNAILAAYAHTGELHDV 100
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+ H E F +F L+ S T + + C
Sbjct: 101 EKTH------------------------EAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
S L Y +K GL DVFV L+++Y K + AR LF+ M DVV W+ ++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
Y + G G+E L LF SG+RP+ V++ +L + E L+ R + +
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVC 256
Query: 510 PTRERRSCVVDLLA---RAGRVHEAEDFINQMAFDD---DIVVWKSLLASCKTHGNVDVG 563
+ L+ +AG EA D M D + + +L+ + ++++G
Sbjct: 257 DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELG 316
Query: 564 KRAAENILK------IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
K+ +++ + NSA N+Y +G R+ G MKE
Sbjct: 317 KQIHGAVVRFGWDQFVSVANSA-----INMYVKAGSVNYARRMFGQMKE 360
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF--MEDPDVVSW 444
A + L +G + H I+ +GL D +V N L+ MY KCGSL SAR+LF+ D D+V++
Sbjct: 25 ADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTY 84
Query: 445 SSLIVGYAQFG------CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG--LVEEGL 496
++++ YA G EA +FR +R S + TL + C G E L
Sbjct: 85 NAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEAL 144
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
Q Y + + G+ +V++ A+ R+ EA ++M D+V+W ++ +
Sbjct: 145 QGYAV---KIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPV-RDVVLWNVMMKAYVE 200
Query: 557 HGNVD 561
G D
Sbjct: 201 MGAGD 205
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 193/586 (32%), Positives = 316/586 (53%), Gaps = 66/586 (11%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
IRP+ T+ ++ C+ + + G+++H H++ + D + N ++ MY KCG + +AR
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
M+FD+MP+R+ +SW AMI+G +NG +EL+ M + + PD T ++ AC L
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
LGR +H +V+KSE G + N+LI MY+ R
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR------------------------ 349
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
L+ A TVF+ MES ++ SW +IA + S +A+ + M ++PD +T+ S
Sbjct: 350 ----LEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVS 405
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------ 361
+L AC L G+++H IK G S+V V N+++ A E+FR
Sbjct: 406 VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKN 465
Query: 362 ---------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
LF + KP+ +T V+ ACA + +L G ++H +
Sbjct: 466 VVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAH 525
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++TG+ D F+ N ++DMYV+CG A FN + DV +W+ L+ GYAQ G + A
Sbjct: 526 ALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLA 584
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
++LF +M + P+ +T + +L ACS G+V EGL+ + IM+N+Y + P + +CVVD
Sbjct: 585 VELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVD 644
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
+L RAG++ +A DFI M D +W +LL +C+ H NV++G+ AA+ + + D +
Sbjct: 645 ILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGY 704
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+LLCN+YA G W++V+++ M+ERG+ PG SW+EI+ K+HA
Sbjct: 705 YILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHA 750
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 144/343 (41%), Gaps = 64/343 (18%)
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------GEL---FRLFSL 365
LS + +Q H + ++K + V A + H A G L +
Sbjct: 30 LSFSKNLQTHKHTLRK--TQEISVVGAAVSHSAIDQTQNLELRELCLQGNLEQAMKRLES 87
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
ML + + + + ++ C + + G++++ + + L V + N L+ M+V+ G+
Sbjct: 88 MLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGN 147
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L A +F M + DV SW+ L+ GYA+ GC +EAL L+ RM + +RPN T VL
Sbjct: 148 LLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKT 207
Query: 486 CSHVGLVEEGLQLYR------------------IMQNEYGII----------PTRERRS- 516
C+ V + G +++ M + G I P R+R S
Sbjct: 208 CAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISW 267
Query: 517 --CVVDLLARAGRVHEAEDF--INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ G + E F + +++ D D++ ++ ++C+ N +G+ ++K
Sbjct: 268 NAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVK 327
Query: 573 ------IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
I NS L +Y+S G+ EE + M+ + V
Sbjct: 328 SEFGGDISMNNS-----LIQMYSSLGRLEEAETVFSRMESKDV 365
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 193/586 (32%), Positives = 316/586 (53%), Gaps = 66/586 (11%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
IRP+ T+ ++ C+ + + G+++H H++ + D + N ++ MY KCG + +AR
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
M+FD+MP+R+ +SW AMI+G +NG +EL+ M + + PD T ++ AC L
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
LGR +H +V+KSE G + N+LI MY+ R
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR------------------------ 349
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
L+ A TVF+ MES ++ SW +IA + S +A+ + M ++PD +T+ S
Sbjct: 350 ----LEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVS 405
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------ 361
+L AC L G+++H IK G S+V V N+++ A E+FR
Sbjct: 406 VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKN 465
Query: 362 ---------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
LF + KP+ +T V+ ACA + +L G ++H +
Sbjct: 466 VVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAH 525
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++TG+ D F+ N ++DMYV+CG A FN + DV +W+ L+ GYAQ G + A
Sbjct: 526 ALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLA 584
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
++LF +M + P+ +T + +L ACS G+V EGL+ + IM+N+Y + P + +CVVD
Sbjct: 585 VELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVD 644
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
+L RAG++ +A DFI M D +W +LL +C+ H NV++G+ AA+ + + D +
Sbjct: 645 ILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGY 704
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+LLCN+YA G W++V+++ M+ERG+ PG SW+EI+ K+HA
Sbjct: 705 YILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHA 750
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 144/343 (41%), Gaps = 64/343 (18%)
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------GEL---FRLFSL 365
LS + +Q H + ++K + V A + H A G L +
Sbjct: 30 LSFSKNLQTHKHTLRK--TQEISVVGAAVSHSAIDQTQNLELRELCLQGNLEQAMKRLES 87
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
ML + + + + ++ C + + G++++ + + L V + N L+ M+V+ G+
Sbjct: 88 MLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGN 147
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L A +F M + DV SW+ L+ GYA+ GC +EAL L+ RM + +RPN T VL
Sbjct: 148 LLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKT 207
Query: 486 CSHVGLVEEGLQLYR------------------IMQNEYGII----------PTRERRS- 516
C+ V + G +++ M + G I P R+R S
Sbjct: 208 CAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISW 267
Query: 517 --CVVDLLARAGRVHEAEDF--INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ G + E F + +++ D D++ ++ ++C+ N +G+ ++K
Sbjct: 268 NAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVK 327
Query: 573 ------IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
I NS L +Y+S G+ EE + M+ + V
Sbjct: 328 SEFGGDISMNNS-----LIQMYSSLGRLEEAETVFSRMESKDV 365
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 333/634 (52%), Gaps = 69/634 (10%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
+ E + S + D + L S L +Q + AL F +Q + ++P T A L+S
Sbjct: 314 SAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC---LKPDCITVASLLS 370
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+S+ +L G ++H H + + D +L +L++Y KC +E A F N+V
Sbjct: 371 ACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVL 430
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W M+ Q + + E++ QM G++P+QFT+ SI+R C+ L + LG Q+H HVI
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI 490
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
K+ ++ + LI MY K+ +L A +
Sbjct: 491 KTGFQLNVYVCSVLIDMYAKY----------------------------GQLALALRILR 522
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ ++ SW +IAG +EA+ LF EM R + D + S + AC +L Q
Sbjct: 523 RLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQ 582
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQ---------------------------------HQ 355
G QIH+ GF +++ + NA++ Q
Sbjct: 583 GQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQ 642
Query: 356 AG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+G E ++F ML ++ + + T+ + A A++A+++ G Q+H ++KTG + V
Sbjct: 643 SGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREV 702
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ +Y K GS+ A FN M + +V+SW+++I GY+Q GCG EAL+LF M+ G+
Sbjct: 703 SNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI 762
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
PNHVT VGVL+ACSH+GLV+EGL + M + ++P E CVVDLL RAG++ A
Sbjct: 763 MPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAM 822
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
++I +M D ++W++LL++C H N+++G+RAA ++L+++P +SA VL+ NIYA S
Sbjct: 823 EYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSR 882
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+W MK+ GV+K PG+SWIE++ +HA
Sbjct: 883 QWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHA 916
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 272/576 (47%), Gaps = 81/576 (14%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFR------------IRPS 81
+VD++ R D +F +++++ + F+ +NF+ I P+
Sbjct: 99 LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPN 158
Query: 82 --TYADLISACSSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T+A ++ AC + ++VH ++ N ++++Y K G +E A+ VF
Sbjct: 159 GYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF 218
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+ + +++V+W AMI+G SQNG E AI L+ M S + P + S++ A + +
Sbjct: 219 NCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFE 278
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG QLH VIK S N L+A+Y++ +++ A +FS++ +D S+ S+I G
Sbjct: 279 LGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLV 338
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ F ++ A+ LF++M L PD +TV SLL
Sbjct: 339 QQGF----------------------------SDRALELFTKMQRDCLKPDCITVASLLS 370
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----------HQ------------ 355
AC S +L++GMQ+HS+ IK G +++ + ++L H+
Sbjct: 371 ACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVL 430
Query: 356 -------AGEL------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
G+L F +F M P+ T+ ++ C ++ +L +G Q+H +++
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI 490
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KTG L+V+V + L+DMY K G L A + + + DVVSW+++I GY Q EAL+
Sbjct: 491 KTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQ 550
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M G++ +++ ++AC+ + + +G Q++ G + ++ L
Sbjct: 551 LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIH-AQSYAAGFGADLSINNALISLY 609
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
AR GR+ EA ++ D + + W SL++ G
Sbjct: 610 ARCGRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSG 644
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 227/518 (43%), Gaps = 67/518 (12%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
R Y L+ C + SL ++H I S + +L + +++ Y + G A
Sbjct: 55 RSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVK 114
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC-SGLC 195
VFDE R+V SW MI L+ +ML G+ P+ +TF +++AC G
Sbjct: 115 VFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDI 174
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+Q+H+ S + N LI +Y+K I A VF+ I KDI +W +MI
Sbjct: 175 AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMIS 234
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G S+ N +E EA+ LF +M E+ P + S
Sbjct: 235 GLSQ--------NGLEE--------------------EAILLFCDMHASEIFPTPYVLSS 266
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------- 352
+L A T G Q+H +IK GF+S VCN ++
Sbjct: 267 VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 353 -------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q + LF+ M KPD IT ++ ACA++ +L G QLH
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ +K G++ D+ + L+D+Y KC + +A + F E ++V W+ ++V Y Q +
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSD 446
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
+ ++FR+M+ G+ PN T +L C+ +G + G Q++ + G S ++
Sbjct: 447 SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLI 505
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
D+ A+ G++ A + ++ +DD+V W +++A H
Sbjct: 506 DMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 153/336 (45%), Gaps = 42/336 (12%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A VF+E + ++ SWN +I + + + LF M + P+G T +L AC
Sbjct: 112 AVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG 171
Query: 323 -PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------------ 361
++ Q+HS GF S+ V N ++ A ++F
Sbjct: 172 GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVA 231
Query: 362 ----------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
LF M AS+ P + V+ A + E+G QLHC ++K G
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ +V NGL+ +Y + L SA +F+ M D VS++SLI G Q G + AL+LF
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ ++P+ +T+ +L+AC+ VG + +G+QL+ + G+ ++DL ++
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHS-HAIKAGMSADIILEGSLLDLYSKC 410
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
V A F ++IV+W +L + +G +D
Sbjct: 411 ADVETAHKFFLXTE-TENIVLWNVMLVA---YGQLD 442
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
+L + M + ++ + ++ C SL +LHC I K+G + +++ L+D Y
Sbjct: 44 QLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNY 103
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
+ G A ++F+ + V SW+ +I + + LFRRM + G+ PN T
Sbjct: 104 FRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFA 163
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
GVL AC + ++ YG + + ++DL ++ G + A+ N +
Sbjct: 164 GVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
DIV W ++++ +G A++L C+++AS
Sbjct: 224 -KDIVTWVAMISGLSQNG-----------------LEEEAILLFCDMHAS 255
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 193/581 (33%), Positives = 316/581 (54%), Gaps = 64/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + L++AC+SL LQ G ++H ++ + D ++ +L++Y KCG +E A ++F+
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSS 305
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ NVV W M+ Q + EL+ QM +G+ P+QFT+ I+R C+ + LG
Sbjct: 306 DRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGE 365
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H+ +K+ S + LI MY+K+ W L+
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKY-----GW-----------------------LE 397
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR V ++ ++ SW ++IAG +A++ F EM + PD + + S + C
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------- 353
++ QG+QIH+ I G+ +V + NA++
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNG 517
Query: 354 -----HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
Q+G E ++F M S K + TF + A A +A ++ G Q+H ++KTG
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ + V N L+ +Y KCGS A+ F+ M + + VSW+++I +Q G G EAL LF
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFD 637
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ G++PN VT +GVL ACSHVGLVEEGL ++ M +EYGI P + +CV+D+ RA
Sbjct: 638 QMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRA 697
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ A+ FI +M D +VW++LL++CK H N++VG+ AA+++L+++P +SA+ VLL
Sbjct: 698 GQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLS 757
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N YA + KW ++ M++RGVRK PG+SWIE++ +HA
Sbjct: 758 NAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHA 798
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 241/505 (47%), Gaps = 70/505 (13%)
Query: 80 PSTYADLISAC-SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
P +A + AC + R Q+ ++H ++ ++ N ++++Y K G + AR VF
Sbjct: 41 PLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF 100
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+E+ R+ VSW AM++G +QNG A+ LY QM ++G++P + S++ +C+
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFA 160
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GR +HA K S + NA+I +Y + A VF + +D
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTV---------- 210
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++NT+I+G A C + A+ +F EM L PD +T+ SLL
Sbjct: 211 ------------------TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLA 252
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYS-------------------------------NVPV 347
AC S L +G Q+HSY+ K G S NV +
Sbjct: 253 ACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVL 312
Query: 348 CNAILQ-----HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
N +L + + F LF M A+ +P+ T+ ++ C +++G Q+H +
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KTG D++V L+DMY K G L AR + +++ DVVSW+S+I GY Q C ++AL
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY-GIIPTRERRSCVVD 520
F+ M+ G+ P+++ L ++ C+ + + +GLQ++ RI + Y G + + +V+
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI---WNALVN 489
Query: 521 LLARAGRVHEAEDFINQMAFDDDIV 545
L AR GR+ EA +M D I
Sbjct: 490 LYARCGRIREAFSSFEEMELKDGIT 514
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 240/516 (46%), Gaps = 68/516 (13%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P + ++S+C+ GR +H + + N ++ +Y +CGS A VF
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+MP R+ V++ +I+G +Q G A+E++ +M SGL PD T S++ AC+ L +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G QLH+++ K+ S I + +L+ +Y K + A +F+S R ++ W M+ F +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
++ +LA ++ LF +M + P+ T +L
Sbjct: 323 IN------------DLA----------------KSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
CT + G QIHS +K GF S++ V ++
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 353 --------QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
QH+ + F M PD+I + CA + ++ G Q+H I
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + DV + N L+++Y +CG + A F ME D ++ + L+ G+AQ G EEALK+
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKV 534
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLL 522
F RM SGV+ N T V L+A +++ +++G Q++ R+++ + E + ++ L
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF--ETEVGNALISLY 592
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G +A+ ++M+ + + V W +++ SC HG
Sbjct: 593 GKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQHG 627
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 2/196 (1%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E L+ M + P + V+ +C G +H K G ++FV N ++
Sbjct: 126 EALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVI 185
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
+Y++CGS A +F M D V++++LI G+AQ G GE AL++F M+ SG+ P+ V
Sbjct: 186 TLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCV 245
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T+ +L AC+ +G +++G QL+ + + GI ++DL + G V A N
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYL-FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 538 MAFDDDIVVWKSLLAS 553
+ ++V+W +L +
Sbjct: 305 -SDRTNVVLWNLMLVA 319
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H + GL V N L+D+Y K G + AR +F + D VSW +++ GYAQ G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG-------------------- 495
GEEAL L+R+M +GV P L VL++C+ L +G
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 496 --LQLY------RIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFD---D 542
+ LY R+ + + +P R+ + ++ A+ G A + +M F
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILK 572
D V SLLA+C + G++ G + + K
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFK 272
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 209/586 (35%), Positives = 304/586 (51%), Gaps = 66/586 (11%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP + A +SACS+L L+ GR++H + S + D + N ++++Y KC L AR
Sbjct: 217 VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAAR 276
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD M RN+VSWT MI+G QN AI ++ M Q+G PD F SI+ +C L
Sbjct: 277 KLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLA 336
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ GRQ+HAHVIK++ + +NALI MY K + + +A
Sbjct: 337 AIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEA-------------------- 376
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
R VF+ + + S+N +I G + + EA+++F M L P LT S
Sbjct: 377 --------RAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVS 428
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKG-------------------------------FYSN 344
LL +S L++ QIH IIK G Y +
Sbjct: 429 LLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKD 488
Query: 345 VPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ + N+++ Q E +LF+ +L S P+ TF ++ + +AS+ G Q H
Sbjct: 489 MVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHA 548
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+I+K G+ D V N L+DMY KCG + R LF DV+ W+S+I YAQ G EE
Sbjct: 549 WIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEE 608
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL++FR M + V PN+VT VGVL+AC+H G V EGL + M++ Y I P E + VV
Sbjct: 609 ALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVV 668
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+L R+G++H A++FI +M VW+SLL++C GN ++G+ AAE L DPT+S
Sbjct: 669 NLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSG 728
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL NIYAS G W +V L M G K G SWIE+ ++H
Sbjct: 729 PYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVH 774
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 247/514 (48%), Gaps = 66/514 (12%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A ++ AC+ +++ LG +VH + + + ++N+Y K G +++A +VF +P
Sbjct: 124 ASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPV 183
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
R V+W +I G +Q G A+EL+ +M G+ PD+F S + ACS L + GRQ+
Sbjct: 184 RTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQI 243
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H + +S + N LI +Y K R+ A +F + +++ SW +MI G+ + F
Sbjct: 244 HGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSF- 302
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
NA EA+++F M PDG S+L +C S
Sbjct: 303 --------------------------NA-EAITMFWNMTQAGWQPDGFACTSILNSCGSL 335
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------------------- 356
+++QG QIH+++IK ++ V NA++ A
Sbjct: 336 AAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMI 395
Query: 357 ---------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
E +F M +P +TF ++G ++ ++E+ Q+H I+K+G +
Sbjct: 396 EGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTS 455
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
LD++ + L+D+Y KC + A+ +FN + D+V W+S+I G+AQ GEEA+KLF ++
Sbjct: 456 LDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQL 515
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
SG+ PN T V ++T S + + G Q + + G+ + ++D+ A+ G
Sbjct: 516 LLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKA-GVDNDPHVSNALIDMYAKCGF 574
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ E + + +D++ W S++ + HG+ +
Sbjct: 575 IKEGR-MLFESTCGEDVICWNSMITTYAQHGHAE 607
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 206/444 (46%), Gaps = 74/444 (16%)
Query: 57 QNLYN-EALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQP 113
QN +N EA+ F N T +P +A ++++C SL ++ GR++H H++ + +
Sbjct: 299 QNSFNAEAITMF---WNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEA 355
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D + N +++MY KC L +AR VFD + + + +S+ AMI G S+N A+ ++ +M
Sbjct: 356 DEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMR 415
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
L P TF S++ S + L +Q+H +IKS L + +ALI +Y+K +
Sbjct: 416 FFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVN 475
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
DA VF+ + KD+ W SMI G ++ NE E
Sbjct: 476 DAKTVFNMLHYKDMVIWNSMIFGHAQ--------NE--------------------QGEE 507
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL- 352
A+ LF+++ + P+ T +L+ ++ S++ G Q H++IIK G ++ V NA++
Sbjct: 508 AIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALID 567
Query: 353 ----------------------------------QH-QAGELFRLFSLMLASQTKPDHIT 377
QH A E ++F LM ++ +P+++T
Sbjct: 568 MYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVT 627
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN--GLMDMYVKCGSLGSARELFNF 435
F V+ ACA + G H MK+ ++ + + +++++ + G L +A+E
Sbjct: 628 FVGVLSACAHAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIER 686
Query: 436 ME-DPDVVSWSSLIVGYAQFGCGE 458
M P W SL+ FG E
Sbjct: 687 MPIKPAAAVWRSLLSACHLFGNAE 710
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
AS P+ V+ AC ++ +G Q+H +K L +V+V L+++Y K G +
Sbjct: 113 ASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMD 172
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A +F+ + V+W+++I GYAQ GCG AL+LF RM GVRP+ L ++ACS
Sbjct: 173 EAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACS 232
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVHEAEDFINQMAFDDD 543
+G +E G Q++ Y E + V +DL + R+ A + M + +
Sbjct: 233 ALGFLEGGRQIH-----GYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEY-RN 286
Query: 544 IVVWKSLLA 552
+V W ++++
Sbjct: 287 LVSWTTMIS 295
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 326/602 (54%), Gaps = 69/602 (11%)
Query: 63 ALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
AL FD +Q + +RP T A L++AC+S+ LQ G+++H ++L + D +
Sbjct: 229 ALQIFDEMQLSG---LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+L++Y KCG +E A +F+ + NVV W M+ Q + E++ QM +G+ P+
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
QFT+ I+R C+ + LG Q+H+ IK+ S + LI MY+K+
Sbjct: 346 QFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKY----------- 394
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
LD AR + +E ++ SW ++IAG EA++ F E
Sbjct: 395 -----------------GCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------- 353
M D + PD + + S AC ++ QG+QIH+ + G+ +++ + N ++
Sbjct: 438 MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGR 497
Query: 354 -HQAGELFR----------------------------LFSLMLASQTKPDHITFNDVMGA 384
+A LFR +F M + K + TF + A
Sbjct: 498 SEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA 557
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
A +A ++ G Q+H +KTG + V N L+ +Y KCGS+ A+ +F+ M + VSW
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSW 617
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+++I +Q G G EAL LF +M+ G++PN VT +GVL ACSHVGLVEEGL ++ M N
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSN 677
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
YG+ P + +CVVD+L RAG++ A F+++M + ++W++LL++CK H N+++G+
Sbjct: 678 VYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGE 737
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
AA+++L+++P +SA+ VLL N YA +GKW ++ MK+RG+RK PG+SWIE++ +
Sbjct: 738 LAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAV 797
Query: 625 HA 626
HA
Sbjct: 798 HA 799
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 226/476 (47%), Gaps = 68/476 (14%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D ++ N ++++Y K G + AR VF E+ R+ VSW AM++G +Q+G A LY QM
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMH 136
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ ++P + S++ AC+ GR +HA V K S NALIA+Y
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYL------ 190
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
GF A VF +M + ++NT+I+G A C +
Sbjct: 191 ----------------------GFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------------ 341
A+ +F EM L PD +TV SLL AC S L +G Q+HSY++K G
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 342 -------------------YSNVPVCNAIL--QHQAGEL---FRLFSLMLASQTKPDHIT 377
+NV + N +L Q +L F +F M A+ P+ T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ ++ C +E+G Q+H +K G D++V L+DMY K G L AR++ +E
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DVVSW+S+I GY Q EEAL F+ M+ GV P+++ L +AC+ + + +GLQ
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468
Query: 498 LY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
++ R+ + Y + +V+L AR GR EA ++ D+I W L++
Sbjct: 469 IHARVYVSGYA--ADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEI-TWNGLIS 521
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 233/516 (45%), Gaps = 68/516 (13%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P + ++SAC+ + GR +H + + + N ++ +Y GS + A VF
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+M + V++ +I+G +Q G A++++ +M SGL PD T S++ AC+ + +
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+QLH++++K+ I++ +L+ +Y K I
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDI--------------------------- 296
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ A +FN + N+ WN ++ S+ ++ +F +M + P+ T +L
Sbjct: 297 -ETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRT 355
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
CT + G QIHS IK GF S++ V ++
Sbjct: 356 CTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSW 415
Query: 353 --------QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
QH E F M PD+I ACA + ++ G Q+H +
Sbjct: 416 TSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYV 475
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G A D+ + N L+++Y +CG A LF +E D ++W+ LI G+ Q ++AL +
Sbjct: 476 SGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMV 535
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLL 522
F +M +G + N T + ++A +++ +++G Q++ R ++ G E + ++ L
Sbjct: 536 FMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT--GHTSETEVANALISLY 593
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + +A+ ++M+ ++ V W +++ SC HG
Sbjct: 594 GKCGSIEDAKMIFSEMSLRNE-VSWNTIITSCSQHG 628
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 185/418 (44%), Gaps = 74/418 (17%)
Query: 183 TFGSIIRACSGLCCVGLGR------QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
GS C+ C G G ++HA + G+ + N LI +Y K + A
Sbjct: 39 ALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQAR 98
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF ++ +D SW +M+ G+++ + EA
Sbjct: 99 QVFKELSSRDHVSWVAMLSGYAQSGLGK----------------------------EAFR 130
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
L+S+M +IP + S+L ACT QG IH+ + K+ F S V NA++
Sbjct: 131 LYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYL 190
Query: 353 -------------------------------QHQAGE-LFRLFSLMLASQTKPDHITFND 380
Q GE ++F M S +PD +T
Sbjct: 191 GFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVAS 250
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ ACA++ L+ G QLH Y++K G++ D L+D+YVKCG + +A ++FN + +
Sbjct: 251 LLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTN 310
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
VV W+ ++V Y Q ++ ++F +M+++G+ PN T +L C+ G +E G Q++
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHS 370
Query: 501 I-MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ ++N G ++D+ ++ G + +A + +M D+V W S++A H
Sbjct: 371 LSIKN--GFESDMYVSGVLIDMYSKYGCLDKARKIL-EMLEKRDVVSWTSMIAGYVQH 425
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/644 (31%), Positives = 321/644 (49%), Gaps = 112/644 (17%)
Query: 66 AFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMY 125
A + + + + TY ++ C+ L+S+Q GR++H I S+ + D VL + ++ MY
Sbjct: 87 AMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMY 146
Query: 126 GKCGSL-------------------------------------------------EDARM 136
CG L E AR
Sbjct: 147 VTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARK 206
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+FDE+ R+V+SW +MI+G NG ++L+ QML G+ D T S++ CS
Sbjct: 207 LFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGM 266
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ LGR LH + IK+ G L N L+ MY+K + A VF ++ + + S
Sbjct: 267 LLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS------- 319
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
W ++IAG A ++ ++ LF EM + PD T+ ++
Sbjct: 320 ---------------------WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTI 358
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLM----- 366
L AC L G +H+YI + S++ V NA++ A G+ +FS M
Sbjct: 359 LHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDI 418
Query: 367 -------------------------LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ +KP+ IT ++ ACA++A+LE G ++H +I
Sbjct: 419 VSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHI 478
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ G +LD V N L+DMY+KCG+LG AR LF+ + + D+VSW+ +I GY G G EA+
Sbjct: 479 LRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAI 538
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
F MR+SG+ P+ V+ + +L ACSH GL++EG + +M+N I P E +C+VDL
Sbjct: 539 AAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDL 598
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
LARAG + +A FI M + D +W +LL C+ + +V + ++ AE++ +++P N+
Sbjct: 599 LARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYY 658
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL NIYA + KWEEV +L + RG+RK PG SWIEI+ K+H
Sbjct: 659 VLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVH 702
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 220/467 (47%), Gaps = 88/467 (18%)
Query: 35 VDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFD---FLQNNTNFRIRPSTYAD 85
V+S + FD++ D D + S L + L F+ L NT+ +T
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDL----ATMVS 256
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+++ CS+ L LGR +H + + + + L+N +L+MY K G+L A VF+ M +R+
Sbjct: 257 VVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERS 316
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL---GRQ 202
VVSWT+MIAG ++ G + ++ L+ +M + G+ PD FT +I+ AC+ C GL G+
Sbjct: 317 VVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACA---CTGLLENGKD 373
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H ++ +++ S L NAL+ MY K + DA +VFS + KDI SW +MI G+SK
Sbjct: 374 VHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSK--- 430
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
N++ NEA++LF EM P+ +T+ +L AC S
Sbjct: 431 ----------------NSL---------PNEALNLFVEM-QYNSKPNSITMACILPACAS 464
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------------- 353
+L +G +IH +I++ GF + V NA++
Sbjct: 465 LAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVM 524
Query: 354 ------HQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
H G E F+ M S +PD ++F ++ AC+ L+ G +M+
Sbjct: 525 IAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF-NMMRNNC 583
Query: 407 ALDVFVMNG--LMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG 450
++ + ++D+ + G+L A + M +PD W +L+ G
Sbjct: 584 CIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 209/604 (34%), Positives = 328/604 (54%), Gaps = 67/604 (11%)
Query: 62 EALVAF-DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHN 119
EA+ AF D L+ F + + ACS+ ++ LG+ + +L + + D +
Sbjct: 25 EAISAFFDMLE--CGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGC 82
Query: 120 HILNMYGKC-GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
+++M+ K G LE A VFD MP RNVV+WT MI Q G A++L++ M+ SG +
Sbjct: 83 ALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYV 142
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD+FT ++ AC+ + + LGRQ H V+KS + +L+ MY K
Sbjct: 143 PDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAK---------- 192
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG-VASCSNANEAMSL 297
+ DG +D AR VF+ M N+ SW II G V S EA+ L
Sbjct: 193 -------------CVADG--SVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIEL 237
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG----------------- 340
F EM ++ P+ T S+L AC + ++ G Q+++ ++K
Sbjct: 238 FLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSR 297
Query: 341 --------------FYSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDV 381
F N+ N I+ A E F LF+ + + T + TF +
Sbjct: 298 CGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASL 357
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ +++ ++ G Q+H I+K+G ++ + N L+ MY +CG++ +A ++FN M D +V
Sbjct: 358 LSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNV 417
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SW+S+I G+A+ G AL+ F +M +GV PN VT + VL+ACSHVGL+ EGL+ ++
Sbjct: 418 ISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKS 477
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M+ E+GI+P E +CVVDLL R+G + EA + +N M F D +V ++ L +C+ HGN+D
Sbjct: 478 MKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMD 537
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+GK AAE IL+ DP + AA +LL N++AS+G+WEEVA + MKER + K G SWIE++
Sbjct: 538 LGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVE 597
Query: 622 TKIH 625
K+H
Sbjct: 598 NKVH 601
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 224/474 (47%), Gaps = 77/474 (16%)
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+R++VSW+A+I+ + N + AI + ML+ G P+++ F + RACS + LG+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 203 LHAHVIKSEH-GSHLISQNALIAMYTKFDRILD-AWNVFSSIARKDITSWGSMIDGFSKL 260
+ ++K+ + S + ALI M+ K + L+ A+ VF + +++ +W MI F +L
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
F+R +A+ LF +M +PD T+ ++ AC
Sbjct: 124 GFSR----------------------------DAVDLFLDMVLSGYVPDRFTLSGVVSAC 155
Query: 321 TSPLSLYQGMQIHSYIIKKGF-----------------------------YSNVPVCN-- 349
L G Q H ++K G + +PV N
Sbjct: 156 AEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVM 215
Query: 350 ---AILQH--QAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
AI+ Q+G E LF M+ Q KP+H TF+ V+ ACA ++ + +G Q++
Sbjct: 216 SWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYAL 275
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++K LA V N L+ MY +CG++ +AR+ F+ + + ++VS+++++ YA+ EEA
Sbjct: 276 VVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEA 335
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVV 519
+LF + +G N T +L+ S +G + +G Q++ RI+++ G + ++
Sbjct: 336 FELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKS--GFKSNLHICNALI 393
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+ +R G + A N+M D +++ W S++ HG RA E K+
Sbjct: 394 SMYSRCGNIEAAFQVFNEMG-DGNVISWTSMITGFAKHG---FATRALETFHKM 443
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 333/651 (51%), Gaps = 67/651 (10%)
Query: 12 PRWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQ 71
PR + C L +A +V R D+ ++ L Q Y + +
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGISPR--DVVSYNTMLGLYAQKAYVKECLGLFGQM 220
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
++ TY +L+ A ++ L G+++H + D + ++ M +CG +
Sbjct: 221 SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ A+ F + R+VV + A+IA +Q+G A E Y +M G+ ++ T+ SI+ AC
Sbjct: 281 DSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
S + G+ +H+H+ + H S + NALI+MY +
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC---------------------- 378
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
L AR +F M +L SWN IIAG A + EAM L+ +M + P +
Sbjct: 379 ------GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRV 432
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------- 352
T LL AC + + G IH I++ G SN + NA++
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492
Query: 353 ----------------QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
QH + E ++LF M + +PD+ITF V+ C +LE+G
Sbjct: 493 QARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGK 552
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H I ++GL LDV + N L++MY++CGSL AR +F+ ++ DV+SW+++I G A G
Sbjct: 553 QIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQG 612
Query: 456 CGEEALKLFRRMRSSGVRP-NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
+A++LF +M++ G RP + T +L+AC+H GLV EG Q++ M++EYG++PT E
Sbjct: 613 EDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEH 672
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
C+V LL RA R EAE INQM F D VW++LL +C+ HGN+ + + AA N LK++
Sbjct: 673 YGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLN 732
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N A +LL N+YA++G+W++VA++ M+ RG+RK PG+SWIE+ IH
Sbjct: 733 ARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIH 783
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 271/536 (50%), Gaps = 70/536 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+TY L+ C+ R L +++H ++ + PD L N ++NMY KC S+ DA VF E
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+R+V+SW ++I+ +Q G + A +L+ +M +G +P++ T+ SI+ AC + G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+++H+ +IK+ + QN+L++MY K + A VF+ I+ +D+ S+ +M+ +++
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ + E + LF +M + PD +T +LL A
Sbjct: 208 AYVK----------------------------ECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
T+P L +G +IH +++G S++ V A++
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYN 299
Query: 353 -------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
QH E F + M + + T+ ++ AC+ +LE G +H +I +
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + DV + N L+ MY +CG L ARELF M D++SW+++I GYA+ EA++L+
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLY 419
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLA 523
++M+S GV+P VT + +L+AC++ +G ++ I+++ GI + ++++
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMNMYR 477
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL--KIDPTN 577
R G + EA++ + D++ W S++A HG+ + + + + +++P N
Sbjct: 478 RCGSLMEAQNVF-EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 150/571 (26%), Positives = 262/571 (45%), Gaps = 70/571 (12%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C + A +V RR W+ L S +Q +A F+ +QN F TY
Sbjct: 75 CRSVLDAHQVFKEMPRRDVISWN-SLISCYAQQGFKKKAFQLFEEMQN-AGFIPNKITYI 132
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC S L+ G+K+H I+ + Q D + N +L+MYGKCG L AR VF + R
Sbjct: 133 SILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR 192
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+VVS+ M+ +Q + L+ QM G+ PD+ T+ +++ A + + G+++H
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIH 252
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
++ S + AL+ M + + A F IA +D+
Sbjct: 253 KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVV---------------- 296
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+N +IA +A + EA + M + + T S+L AC++
Sbjct: 297 ------------VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSK 344
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------------------- 356
+L G IHS+I + G S+V + NA++ A
Sbjct: 345 ALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIA 404
Query: 357 --------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
GE RL+ M + KP +TF ++ ACA ++ G +H I+++G+
Sbjct: 405 GYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKS 464
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ + N LM+MY +CGSL A+ +F + DV+SW+S+I G+AQ G E A KLF+ M+
Sbjct: 465 NGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQ 524
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGR 527
+ + P+++T VL+ C + +E G Q++ RI E G+ + ++++ R G
Sbjct: 525 NEELEPDNITFASVLSGCKNPEALELGKQIHGRI--TESGLQLDVNLGNALINMYIRCGS 582
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +A + + + D++ W +++ C G
Sbjct: 583 LQDARNVFHSLQH-RDVMSWTAMIGGCADQG 612
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 189/409 (46%), Gaps = 66/409 (16%)
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D+ T+ ++++ C+ + +++HA ++++ G + N LI MY K +LDA VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ R+D+ SW S+I +++ F + F LF
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQ----------------------------LFE 117
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAG 357
EM + IP+ +T S+L AC SP L G +IHS IIK G+ + V N++L + G
Sbjct: 118 EMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG 177
Query: 358 ELFR----------------------------------LFSLMLASQTKPDHITFNDVMG 383
+L R LF M + PD +T+ +++
Sbjct: 178 DLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLD 237
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
A + L+ G ++H ++ GL D+ V L+ M V+CG + SA++ F + D DVV
Sbjct: 238 AFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVV 297
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
+++LI AQ G EA + + RMRS GV N T + +L ACS +E G +L
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG-KLIHSHI 356
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+E G + + ++ + AR G + +A + M D++ W +++A
Sbjct: 357 SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIA 404
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 37/252 (14%)
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
T+ D T+ ++ C L ++H +++ G+ D+F+ N L++MYVKC S+ A
Sbjct: 23 TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
++F M DV+SW+SLI YAQ G ++A +LF M+++G PN +T + +LTAC
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 491 LVEEGLQLY-RIMQNEYGIIP----------------TRERR-------------SCVVD 520
+E G +++ +I++ Y P R R+ + ++
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 521 LLARAGRVHEAEDFINQMA---FDDDIVVWKSLLASCKTHGNVDVGKR----AAENILKI 573
L A+ V E QM+ D V + +LL + T +D GKR E L
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Query: 574 DPTNSAALVLLC 585
D ALV +C
Sbjct: 263 DIRVGTALVTMC 274
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 319/608 (52%), Gaps = 77/608 (12%)
Query: 66 AFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMY 125
A F++ T ++ + Y ++ C + + +K+H HI+ + DA L ++N+Y
Sbjct: 57 ALSFIREGT--KVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVY 114
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
KCG++E AR VFDE+P+RNVVSWT ++ G + + A++++ +ML++G P +T G
Sbjct: 115 AKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLG 174
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
+ + A S L LG+Q+H + IK N+L ++Y+K
Sbjct: 175 TALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSK----------------- 217
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
GS L+ A F + N+ SW T+I+ A + F EM
Sbjct: 218 ----CGS-------LECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSEC 266
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAG 357
+ P+ T+ S L C SL G QIHS IK GF SN+P+ N+I+ H+A
Sbjct: 267 VEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAK 326
Query: 358 ELF---------------------------------------RLFSLMLASQTKPDHITF 378
+LF +F + S KPD TF
Sbjct: 327 KLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTF 386
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ V+ C+++ +LE G Q+H +KTG DV V L++MY KCGS+ A + F M
Sbjct: 387 SSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSI 446
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
++SW+S+I GYAQ G ++AL LF MR +GVRPN +T VGVL+ACSH G+V+E L
Sbjct: 447 RTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDY 506
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+++M+NEY I P + +C++D+ R GR+ EA DFI +M + + +W L+A C++ G
Sbjct: 507 FQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQG 566
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+++G AAE +L + P ++ LL N+Y S+GKW+EV+R+ MKE + ++ SWI
Sbjct: 567 KLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWI 626
Query: 619 EIQTKIHA 626
I+ KI++
Sbjct: 627 SIKDKIYS 634
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 316/607 (52%), Gaps = 68/607 (11%)
Query: 62 EALVAFDFLQN--NTNFRIRPS-TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
E +++F FL+N + ++ + T A LI + + L G+++H ++ C P+ L
Sbjct: 54 EEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLS 113
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
NH LN+Y KCG L+ +FD+M QRN+VSWT++I G + N + A+ + QM G +
Sbjct: 114 NHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEI 173
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
QF S+++AC+ L + G Q+H V+K G L + L MY+K + DA
Sbjct: 174 ATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKA 233
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + KD W SM I G + +A++ +
Sbjct: 234 FEEMPCKDAVLWTSM----------------------------IDGFVKNGDFKKALTAY 265
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH---- 354
+M ++ D + S L AC++ + G +H+ I+K GF + NA+
Sbjct: 266 MKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKS 325
Query: 355 ----QAGELFRLFS--LMLASQT---------------------------KPDHITFNDV 381
A +F++ S + + S T +P+ TF +
Sbjct: 326 GDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSL 385
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ ACA A LE G+QLH ++K D FV + L+DMY KCG + +LF+ +E+PD
Sbjct: 386 IKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDE 445
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
++W++L+ ++Q G G A++ F M G++PN VT V +L CSH G+VE+GL +
Sbjct: 446 IAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSS 505
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M+ YG++P E SCV+DLL RAG++ EAEDFIN M F+ ++ W S L +CK HG+++
Sbjct: 506 MEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDME 565
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
K AA+ ++K++P NS A VLL NIYA +WE+V L +K+ + K+PG SW++I+
Sbjct: 566 RAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIR 625
Query: 622 TKIHASG 628
K H G
Sbjct: 626 NKTHVFG 632
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 336/634 (52%), Gaps = 70/634 (11%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
A +V ++ L+R D++ L S L +Q ++AL F + + ++P T A L+S
Sbjct: 325 AEQVFNAMLQR-DEVSYNSLISGLSQQGYSDKALELFKKMCLDC---LKPDCVTVASLLS 380
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
ACSS+ +L +G++ H + + + D +L +L++Y KC ++ A F NVV
Sbjct: 381 ACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVL 440
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W M+ N + +++ QM G+ P+QFT+ SI+R CS L V LG Q+H V+
Sbjct: 441 WNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVL 500
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
K+ ++ + LI MY K KLD A +F
Sbjct: 501 KTGFQFNVYVSSVLIDMYAKL----------------------------GKLDHALKIFR 532
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
++ ++ SW +IAG A EA++LF EM D+ + D + S + AC +L Q
Sbjct: 533 RLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQ 592
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQ---------------------------------HQ 355
G QIH+ G+ ++ V NA++ Q
Sbjct: 593 GQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQ 652
Query: 356 AG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+G E LFS M + + + TF + A A +A++++G Q+H I+KTG + V
Sbjct: 653 SGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEV 712
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ +Y KCG++ A F M + + +SW++++ GY+Q G G +AL LF M+ GV
Sbjct: 713 SNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGV 772
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
PNHVT VGVL+ACSHVGLV+EG++ ++ M+ +G++P E +CVVDLL R+G + A
Sbjct: 773 LPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRAR 832
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
F+ +M D +V ++LL++C H N+D+G+ AA ++L+++P +SA VLL N+YA +G
Sbjct: 833 RFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTG 892
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
KW R MK+RGV+K PG+SWIE+ +HA
Sbjct: 893 KWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHA 926
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 150/569 (26%), Positives = 263/569 (46%), Gaps = 68/569 (11%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
L+ A +V D +R D + + S L + EA++ F + + + P ++ +
Sbjct: 220 FLNSAKKVFDGLQKR-DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPT-PYIFSSV 277
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+SAC+ + ++G ++H +L + + N ++ +Y + G+ A VF+ M QR+
Sbjct: 278 LSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDE 337
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VS+ ++I+G SQ G + A+EL+ +M L PD T S++ ACS + + +G+Q H++
Sbjct: 338 VSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSY 397
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
IK+ S +I + AL+ +Y K I A F S
Sbjct: 398 AIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLST------------------------ 433
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
E+ N+ WN ++ N NE+ +F++M + P+ T S+L C+S ++
Sbjct: 434 ----ETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAV 489
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------------- 352
G QIH+ ++K GF NV V + ++
Sbjct: 490 DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGY 549
Query: 353 -QHQA-GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
QH+ E LF M D+I F + ACA + +L G Q+H +G + D+
Sbjct: 550 AQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDL 609
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V N L+ +Y +CG + A F+ + D +SW+SLI G+AQ G EEAL LF +M +
Sbjct: 610 SVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKA 669
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G N T ++A ++V V+ G Q++ ++ G E + ++ L A+ G + +
Sbjct: 670 GQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKT-GHDSETEVSNVLITLYAKCGNIDD 728
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGN 559
AE +M ++I W ++L HG+
Sbjct: 729 AERQFFEMPEKNEI-SWNAMLTGYSQHGH 756
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 230/534 (43%), Gaps = 75/534 (14%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
+ F L R TY L+ C S G K+H IL + VL ++++
Sbjct: 53 INFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDL 112
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y G L+ A VFDEMP R + W ++ + L+ +MLQ + PD+ T+
Sbjct: 113 YIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTY 172
Query: 185 GSIIRACSG----LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
++R C G CV ++HA I + + L N LI +Y K + A VF
Sbjct: 173 AGVLRGCGGGDVPFHCV---EKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFD 229
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ ++D SW +M+ G S+ + C EA+ LF +
Sbjct: 230 GLQKRDSVSWVAMLSGLSQ--------------------------SGCE--EEAVLLFCQ 261
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------- 352
M + P S+L ACT G Q+H ++K+GF VCNA++
Sbjct: 262 MHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGN 321
Query: 353 ----------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
Q + + LF M KPD +T ++ A
Sbjct: 322 FIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSA 381
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
C+++ +L +G Q H Y +K G++ D+ + L+D+YVKC + +A E F E +VV W
Sbjct: 382 CSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLW 441
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQ 503
+ ++V Y E+ K+F +M+ G+ PN T +L CS + V+ G Q++ ++++
Sbjct: 442 NVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK 501
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
G S ++D+ A+ G++ A ++ + D+V W +++A H
Sbjct: 502 T--GFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQH 552
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 141/327 (43%), Gaps = 43/327 (13%)
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC------------ 348
M +R + + T LL C S G ++H I+K GF + V +C
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 349 -------------------NAILQH-----QAGELFRLFSLMLASQTKPDHITFNDVMGA 384
N +L AG + LF ML + KPD T+ V+
Sbjct: 119 LDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRG 178
Query: 385 CAAM-ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
C ++H + G +FV N L+D+Y K G L SA+++F+ ++ D VS
Sbjct: 179 CGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVS 238
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W +++ G +Q GC EEA+ LF +M +SGV P VL+AC+ V + G QL+ ++
Sbjct: 239 WVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVL 298
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
+ G + +V L +R G AE N M D V + SL++ G D
Sbjct: 299 KQ-GFSLETYVCNALVTLYSRLGNFIPAEQVFNAM-LQRDEVSYNSLISGLSQQGYSDKA 356
Query: 564 ----KRAAENILKIDPTNSAALVLLCN 586
K+ + LK D A+L+ C+
Sbjct: 357 LELFKKMCLDCLKPDCVTVASLLSACS 383
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 322/586 (54%), Gaps = 45/586 (7%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L++A +S L R+V D + + V N +L+ + G + D +F +PQR+
Sbjct: 52 LLTAYASSGLLPHARRVFDAMPGR----NLVTGNSLLSALARAGLVRDMERLFTSLPQRD 107
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQML--QSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
VS+ A++AG S+ G A YV +L ++G+ P + T ++ S L LGRQ+
Sbjct: 108 AVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQV 167
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF- 262
H +++ G++ + + L+ MY K I DA VF + K++ +MI G +
Sbjct: 168 HCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMV 227
Query: 263 --ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
AR +F +E + +W T++ G+ +EA+ +F M + D T S+L AC
Sbjct: 228 AEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTAC 287
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
+ +L +G QIH+YI + + NV V +A++
Sbjct: 288 GALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWT 347
Query: 353 -------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
Q+ GE R+FS M KPD T V+ +CA +ASLE G Q HC + +
Sbjct: 348 AMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS 407
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
GL V V N L+ +Y KCGS+ A LF+ M D VSW++L++GYAQFG +E + LF
Sbjct: 408 GLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLF 467
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M S GV+P+ VT +GVL+ACS GLV++G + MQ ++ I+P + +C++DL +R
Sbjct: 468 EKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSR 527
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
+G + +AE+FI QM D W +LL++C+ G++++GK AAEN+LK+DP N A+ VLL
Sbjct: 528 SGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLL 587
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
C+++AS G+W +VA+L M++R V+K PG SWI+ + K+H D
Sbjct: 588 CSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 633
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 203/487 (41%), Gaps = 119/487 (24%)
Query: 50 LFSSLCKQNL--YNEALVAFD--------------FLQNNTNFRIRPSTYADLISACSSL 93
LF+SL +++ YN L F L++ R T + ++ S+L
Sbjct: 99 LFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASAL 158
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV------ 147
LGR+VH IL A + +++MY K G + DAR VFDEM +NVV
Sbjct: 159 GDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMI 218
Query: 148 -------------------------SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+WT M+ G +QNG E+ A++++ +M G+ DQ+
Sbjct: 219 TGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQY 278
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TFGSI+ AC L + G+Q+HA++ ++ + ++ +AL+ MY+K + A VF +
Sbjct: 279 TFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRM 338
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
K+I SW +MI G+ G C EA+ +FSEM
Sbjct: 339 MWKNIISWTAMIVGY--------------------------GQNGC--GEEAVRVFSEMQ 370
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
+ PD T+ S++ +C + SL +G Q H + G V V NA++
Sbjct: 371 RDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430
Query: 354 ---------------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
+A E LF ML+ KPD +TF V+ AC+
Sbjct: 431 DAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACS 490
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNG----LMDMYVKCGSLGSARELFNFMED-PDV 441
++ G Y D+ ++ ++D+Y + G L A E M PD
Sbjct: 491 RSGLVDKG---RSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDA 547
Query: 442 VSWSSLI 448
W++L+
Sbjct: 548 FGWATLL 554
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 173/377 (45%), Gaps = 41/377 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C ++ +A + ++ R W + + L + L +EAL F ++ I T+
Sbjct: 224 CKMVAEARALFEAIEERDSITWT-TMVTGLTQNGLESEALDVFRRMRAE-GVGIDQYTFG 281
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC +L +L+ G+++H +I + + + + + +++MY KC S+ A VF M +
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWK 341
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N++SWTAMI G QNG A+ ++ +M + G+ PD FT GS+I +C+ L + G Q H
Sbjct: 342 NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFH 401
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ S ++ NAL+ +Y K I DA +F ++ D SW +++ G+++
Sbjct: 402 CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQF---- 457
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP- 323
A E + LF +M + + PDG+T +L AC+
Sbjct: 458 ------------------------GKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSG 493
Query: 324 -----LSLYQGMQI-HSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
S + MQ H + Y+ C L ++G L + + PD
Sbjct: 494 LVDKGRSYFHSMQQDHDIVPLDDHYT----CMIDLYSRSGWLKQAEEFIKQMPRCPDAFG 549
Query: 378 FNDVMGACAAMASLEMG 394
+ ++ AC +E+G
Sbjct: 550 WATLLSACRLRGDMEIG 566
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 330/639 (51%), Gaps = 67/639 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFD-DIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
C L A V + D +W+ L ++ K ++ E L F L + + TY
Sbjct: 243 CHLFQSAKLVFQTIENPLDITLWN-GLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTY 301
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++ ACS L + G+ VH H++ S D V+ + + MY KC EDA +FDEMP+
Sbjct: 302 PSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE 361
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
R+V SW +I+ Q+GQ A+EL+ +M SG PD T ++I +C+ L + G+++
Sbjct: 362 RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEI 421
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +++S +AL+ MY K L+ A
Sbjct: 422 HMELVRSGFALDGFVSSALVDMYGKC----------------------------GCLEMA 453
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
+ VF +++ N+ SWN++IAG + ++ + LF M + + P T+ S+L AC+
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 513
Query: 324 LSLYQGMQIHSYIIK--------------------------KGFYSNVPVCNAILQH--- 354
++L G IH YII+ + + N+P N + +
Sbjct: 514 VNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMI 573
Query: 355 ----QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+ G E +F+ M + KPD ITF V+ AC+ +A LE G ++H +I+++ L
Sbjct: 574 SGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLE 633
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
++ VM L+DMY KCG++ A +FN + + D VSW+S+I Y G EALKLF +M
Sbjct: 634 INEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 693
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
+ S +P+ VT + +L+ACSH GLV+EG + M EYG P E SC++DLL R GR
Sbjct: 694 QQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGR 753
Query: 528 VHEAEDFINQMA-FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EA + + + +D+ + +L ++C H +D+G++ +++ DP + + ++L N
Sbjct: 754 LREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSN 813
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+YAS KW+EV ++ +KE G++K PG SWIE+ +IH
Sbjct: 814 MYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIH 852
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 254/512 (49%), Gaps = 71/512 (13%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR-N 145
++A S+L L LG+ +H I+S Q + L ++N+Y C + A++VF + +
Sbjct: 203 VTAGSALEEL-LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLD 261
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+ W ++A C++N +E++ ++L L PD FT+ S+++ACSGL VG G+ +H
Sbjct: 262 ITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVH 321
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
HVIKS ++ ++ + MY K + DA +F + +D+
Sbjct: 322 THVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDV----------------- 364
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
ASWN +I+ +A+ LF EM PD +T+ +++ +C L
Sbjct: 365 -----------ASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 413
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF---------------- 360
L +G +IH +++ GF + V +A++ A E+F
Sbjct: 414 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 473
Query: 361 ------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
LF M +P T + ++ AC+ +L++G +H YI++ +
Sbjct: 474 GYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEA 533
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+FV + L+D+Y KCG++GSA +F M +VVSW+ +I GY + G EAL +F MR
Sbjct: 534 DIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMR 593
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLARAGR 527
+GV+P+ +T VL ACS + ++E+G +++ I++++ I ++D+ A+ G
Sbjct: 594 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEI--NEVVMGALLDMYAKCGA 651
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
V EA NQ+ + D V W S++A+ +HG
Sbjct: 652 VDEALHIFNQLP-ERDFVSWTSMIAAYGSHGQ 682
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 330/639 (51%), Gaps = 67/639 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFD-DIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
C L A V + D +W+ L ++ K ++ E L F L + + TY
Sbjct: 51 CHLFQSAKLVFQTIENPLDITLWN-GLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTY 109
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++ ACS L + G+ VH H++ S D V+ + + MY KC EDA +FDEMP+
Sbjct: 110 PSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE 169
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
R+V SW +I+ Q+GQ A+EL+ +M SG PD T ++I +C+ L + G+++
Sbjct: 170 RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEI 229
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +++S +AL+ MY K L+ A
Sbjct: 230 HMELVRSGFALDGFVSSALVDMYGKC----------------------------GCLEMA 261
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
+ VF +++ N+ SWN++IAG + ++ + LF M + + P T+ S+L AC+
Sbjct: 262 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 321
Query: 324 LSLYQGMQIHSYIIK--------------------------KGFYSNVPVCNAILQH--- 354
++L G IH YII+ + + N+P N + +
Sbjct: 322 VNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMI 381
Query: 355 ----QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+ G E +F+ M + KPD ITF V+ AC+ +A LE G ++H +I+++ L
Sbjct: 382 SGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLE 441
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
++ VM L+DMY KCG++ A +FN + + D VSW+S+I Y G EALKLF +M
Sbjct: 442 INEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 501
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
+ S +P+ VT + +L+ACSH GLV+EG + M EYG P E SC++DLL R GR
Sbjct: 502 QQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGR 561
Query: 528 VHEAEDFINQMA-FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EA + + + +D+ + +L ++C H +D+G++ +++ DP + + ++L N
Sbjct: 562 LREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSN 621
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+YAS KW+EV ++ +KE G++K PG SWIE+ +IH
Sbjct: 622 MYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIH 660
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 252/513 (49%), Gaps = 70/513 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR- 144
L+ C + L+ G+ +H I+S Q + L ++N+Y C + A++VF +
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++ W ++A C++N +E++ ++L L PD FT+ S+++ACSGL VG G+ +
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H HVIKS ++ ++ + MY K + DA +F + +D+
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDV---------------- 172
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
ASWN +I+ +A+ LF EM PD +T+ +++ +C
Sbjct: 173 ------------ASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARL 220
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF--------------- 360
L L +G +IH +++ GF + V +A++ A E+F
Sbjct: 221 LDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMI 280
Query: 361 -------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
LF M +P T + ++ AC+ +L++G +H YI++ +
Sbjct: 281 AGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVE 340
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D+FV + L+D+Y KCG++GSA +F M +VVSW+ +I GY + G EAL +F M
Sbjct: 341 ADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDM 400
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLARAG 526
R +GV+P+ +T VL ACS + ++E+G +++ I++++ I ++D+ A+ G
Sbjct: 401 RKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEI--NEVVMGALLDMYAKCG 458
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
V EA NQ+ + D V W S++A+ +HG
Sbjct: 459 AVDEALHIFNQLP-ERDFVSWTSMIAAYGSHGQ 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 156/320 (48%), Gaps = 44/320 (13%)
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------HQAGEL-- 359
D + SLL C L QG IH I+ G +N+ +C +++ Q+ +L
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 360 --------FRLFSLMLASQT---------------------KPDHITFNDVMGACAAMAS 390
L++ ++A+ T KPD T+ V+ AC+ +
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
+ G +H +++K+G A+DV VM+ + MY KC A +LF+ M + DV SW+++I
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISC 181
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y Q G E+AL+LF M+ SG +P+ VTL V+++C+ + +E G +++ + G
Sbjct: 182 YYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS-GFAL 240
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRA 566
S +VD+ + G + A++ Q+ ++V W S++A G+ +++ +R
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNSMIAGYSLKGDSKSCIELFRRM 299
Query: 567 AENILKIDPTNSAALVLLCN 586
E ++ T +++++ C+
Sbjct: 300 DEEGIRPTLTTLSSILMACS 319
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/634 (31%), Positives = 331/634 (52%), Gaps = 69/634 (10%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
+ E V S ++ D++ L S L +Q + AL F ++ + ++P T A L+S
Sbjct: 266 SAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY---LKPDCVTVASLLS 322
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+S +L G ++H +++ + D ++ +L++Y C ++ A +F NVV
Sbjct: 323 ACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVL 382
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W M+ + + + ++ QM GL+P+QFT+ SI+R C+ + + LG Q+H VI
Sbjct: 383 WNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVI 442
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
K+ ++ + LI MY K KLD A +
Sbjct: 443 KTGFQFNVYVCSVLIDMYAKH----------------------------GKLDTAHVILR 474
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ ++ SW +I+G A + EA+ F EM +R + D + S + AC +L Q
Sbjct: 475 TLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQ 534
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQ---------------------------------HQ 355
G QIH+ G+ ++ + NA++ Q
Sbjct: 535 GRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQ 594
Query: 356 AG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+G + ++F+ M ++ + TF + A A +A+++ G Q+H I+K G D+ V
Sbjct: 595 SGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEV 654
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ Y KCGS+ AR F M + + VSW+++I GY+Q G G EA+ LF +M+ G
Sbjct: 655 SNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGE 714
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
PNHVT VGVL+ACSHVGLV +GL + M E+G++P +CVVDL++RAG + A
Sbjct: 715 MPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRAR 774
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
FI +M + D +W++LL++C H NV+VG+ AA+++L+++P +SA VLL N+YA SG
Sbjct: 775 KFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSG 834
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
KW+ + M+ RGV+K PG+SWIE++ +HA
Sbjct: 835 KWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHA 868
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/573 (28%), Positives = 276/573 (48%), Gaps = 86/573 (15%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFD-FLQNNTNFRIRPS--TYA 84
+D ++ F+D+ WD + S ++ + N L F ++ N + P+ ++A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWD-KIISGFMEKKMSNRVLDLFSCMIEEN----VSPTEISFA 115
Query: 85 DLISACSSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++ ACS R ++ ++H I+ ++ N ++ +Y K G + AR VFD +
Sbjct: 116 SVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCT 175
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++ VSW AMI+G SQNG E AI L+ +M +G+ P + F S++ C+ + +G QL
Sbjct: 176 KDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235
Query: 204 HAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
HA V K +GS L + NAL+ +Y++ + A VFS + KD S+ S+I G ++
Sbjct: 236 HALVFK--YGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQG 293
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F ++ A+ LF++M L PD +TV SLL AC
Sbjct: 294 F----------------------------SDGALELFTKMKRDYLKPDCVTVASLLSACA 325
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----------HQA-------------- 356
S +L +G Q+HSY+IK G S++ V A+L H+
Sbjct: 326 SNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNV 385
Query: 357 -----------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E FR+F M P+ T+ ++ C ++ +L++G Q+H ++KTG
Sbjct: 386 MLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTG 445
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+V+V + L+DMY K G L +A + + + DVVSW++LI GYAQ EALK F+
Sbjct: 446 FQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFK 505
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M + G++ +++ ++AC+ + + +G Q++ G + +V L AR
Sbjct: 506 EMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHA-QSYVSGYSEDLSIGNALVSLYARC 564
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
GR+ EA ++ D I W L++ G
Sbjct: 565 GRIKEAYLEFEKIDAKDSI-SWNGLISGFAQSG 596
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 242/517 (46%), Gaps = 75/517 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L+ C + SL +K+H IL ++VL N ++++Y G L+ VF++M
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG-LCCVGLG 200
P R+V SW +I+G + N ++L+ M++ + P + +F S++RACSG +
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYA 131
Query: 201 RQLHAHVIKSEHG---SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
Q+HA +I HG S +IS N LI +Y K I+ A VF ++ KD SW +MI GF
Sbjct: 132 EQIHARIIC--HGLLCSPIIS-NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGF 188
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
S+ + EA+ LF EM + P S+L
Sbjct: 189 SQNGYEE----------------------------EAIHLFCEMHTAGIFPTPYVFSSVL 220
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
CT G Q+H+ + K G VCNA++
Sbjct: 221 SGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEV 280
Query: 353 -----------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
Q + LF+ M KPD +T ++ ACA+ +L G QLH Y+
Sbjct: 281 SFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYV 340
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K G++ D+ V L+D+YV C + +A E+F + +VV W+ ++V + + E+
Sbjct: 341 IKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESF 400
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVD 520
++FR+M+ G+ PN T +L C+ VG ++ G Q++ ++++ G S ++D
Sbjct: 401 RIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKT--GFQFNVYVCSVLID 458
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ A+ G++ A + + +DD+V W +L++ H
Sbjct: 459 MYAKHGKLDTAHVILRTLT-EDDVVSWTALISGYAQH 494
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 247/538 (45%), Gaps = 66/538 (12%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
QN Y E + + P ++ ++S C+ ++ +G ++H + +
Sbjct: 190 QNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY 249
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
+ N ++ +Y + + A VF +M ++ VS+ ++I+G +Q G + A+EL+ +M +
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY 309
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
L PD T S++ AC+ + G QLH++VIK+ S +I + AL+ +Y I A
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+F + +++ W M+ F KLD N +E+
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLD----------------------------NLSESFR 401
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
+F +M + LIP+ T S+L CTS +L G QIH+ +IK GF NV VC+ ++
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 353 -------------------------------QHQA-GELFRLFSLMLASQTKPDHITFND 380
QH E + F ML + D+I F+
Sbjct: 462 KHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSS 521
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
+ ACA + +L G Q+H +G + D+ + N L+ +Y +CG + A F ++ D
Sbjct: 522 AISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 581
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+SW+ LI G+AQ G E+ALK+F +M + + + T ++A +++ +++G Q++
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ G E + ++ A+ G + +A +M +D V W +++ HG
Sbjct: 642 MIIKR-GFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKND-VSWNAMITGYSQHG 697
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 326/602 (54%), Gaps = 69/602 (11%)
Query: 63 ALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
AL FD +Q + +RP T A L++AC+S+ LQ G+++H ++L + D +
Sbjct: 229 ALQIFDEMQLSG---LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+L++Y KCG +E A +F+ + NVV W M+ Q + E++ QM +G+ P+
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+FT+ I+R C+ + LG Q+H+ IK+ S + LI MY+K+
Sbjct: 346 KFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKY----------- 394
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
LD AR + +E ++ SW ++IAG EA++ F E
Sbjct: 395 -----------------RCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------- 353
M D + PD + + S AC ++ QG+QIH+ + G+ +++ + N ++
Sbjct: 438 MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGR 497
Query: 354 -HQAGELFR----------------------------LFSLMLASQTKPDHITFNDVMGA 384
+A LFR +F M + K + TF + A
Sbjct: 498 SEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISA 557
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
A +A ++ G Q+H +KTG + V N L+ +Y KCGS+ A+ +F+ M + VSW
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSW 617
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+++I +Q G G EAL LF +M+ G++PN VT +GVL ACSHVGLVEEGL ++ M N
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSN 677
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
YG+ P + +CVVD+L RAG++ A F+++M + ++W++LL++CK H N+++G+
Sbjct: 678 VYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGE 737
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
AA+++L+++P +SA+ VLL N YA +GKW ++ MK+RG+RK PG+SWIE++ +
Sbjct: 738 LAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAV 797
Query: 625 HA 626
HA
Sbjct: 798 HA 799
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/476 (30%), Positives = 224/476 (47%), Gaps = 68/476 (14%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D ++ N ++++Y K G + AR VF E+ R+ VSW AM++G +Q G A LY QM
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH 136
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ ++P + S++ AC+ GR +HA V K S NALIA+Y
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYL------ 190
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
GF A VF +M + ++NT+I+G A C +
Sbjct: 191 ----------------------GFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------------ 341
A+ +F EM L PD +TV SLL AC S L +G Q+HSY++K G
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 342 -------------------YSNVPVCNAIL--QHQAGEL---FRLFSLMLASQTKPDHIT 377
+NV + N +L Q +L F +F M A+ P+ T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ ++ C +E+G Q+H +K G D++V L+DMY K L AR++ +E
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DVVSW+S+I GY Q EEAL F+ M+ GV P+++ L +AC+ + + +GLQ
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468
Query: 498 LY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
++ R+ + Y + +V+L AR GR EA ++ D+I W L++
Sbjct: 469 IHARVYVSGYA--ADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEI-TWNGLIS 521
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 233/516 (45%), Gaps = 68/516 (13%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P + ++SAC+ + GR +H + + + N ++ +Y GS + A VF
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+M + V++ +I+G +Q G A++++ +M SGL PD T S++ AC+ + +
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+QLH++++K+ I++ +L+ +Y K I
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDI--------------------------- 296
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ A +FN + N+ WN ++ S+ ++ +F +M + P+ T +L
Sbjct: 297 -ETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRT 355
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
CT + G QIHS IK GF S++ V ++
Sbjct: 356 CTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSW 415
Query: 353 --------QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
QH E F M PD+I ACA + ++ G Q+H +
Sbjct: 416 TSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYV 475
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G A D+ + N L+++Y +CG A LF ++ D ++W+ LI G+ Q E+AL +
Sbjct: 476 SGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMV 535
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLL 522
F +M +G + N T + ++A +++ +++G Q++ R ++ G E + ++ L
Sbjct: 536 FMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT--GHTSETEVANALISLY 593
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + +A+ ++M+ ++ V W +++ SC HG
Sbjct: 594 GKCGSIEDAKMIFSEMSLRNE-VSWNTIITSCSQHG 628
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 184/418 (44%), Gaps = 74/418 (17%)
Query: 183 TFGSIIRACSGLCCVGLGR------QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
GS C+ C G G ++HA + G+ + N LI +Y K + A
Sbjct: 39 ALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQAR 98
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF ++ +D SW +M+ G+++ + EA
Sbjct: 99 QVFKELSSRDHVSWVAMLSGYAQRGLGK----------------------------EAFR 130
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
L+S+M +IP + S+L ACT QG IH+ + K+ F S V NA++
Sbjct: 131 LYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYL 190
Query: 353 -------------------------------QHQAGE-LFRLFSLMLASQTKPDHITFND 380
Q GE ++F M S +PD +T
Sbjct: 191 GFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVAS 250
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ ACA++ L+ G QLH Y++K G++ D L+D+YVKCG + +A ++FN + +
Sbjct: 251 LLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTN 310
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
VV W+ ++V Y Q ++ ++F +M+++G+ PN T +L C+ G +E G Q++
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHS 370
Query: 501 I-MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ ++N G ++D+ ++ + +A + +M D+V W S++A H
Sbjct: 371 LSIKN--GFESDMYVSGVLIDMYSKYRCLDKARKIL-EMLEKRDVVSWTSMIAGYVQH 425
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 299/530 (56%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD + + N++ W M G + + +A+ LYV M+ GL+P+ +TF +++AC+
Sbjct: 59 VFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKA 118
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K L +LIAMY K R DA VF + +D+ S+ ++I G
Sbjct: 119 FREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKG 178
Query: 257 FSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ + A+ +F+E+ ++ SWN +I+G A N EA+ LF EM + PD T+
Sbjct: 179 YASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTM 238
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---- 361
++L AC S+ G Q+HS+I GF SN+ + NA++ A LF
Sbjct: 239 VTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY 298
Query: 362 ------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
LF ML S P+ +T ++ ACA + ++++G +
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWI 358
Query: 398 HCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G++ + L+DMY KCG + +A+++F+ M + + SW+++I G+A G
Sbjct: 359 HVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHG 418
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
A +F RMR G+ P+ +T VG+L+ACSH G+++ G ++R M +Y I P E
Sbjct: 419 RANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHY 478
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL +G EAE+ IN M D D V+W SLL +CK HGNV++G+ A+N++KI+P
Sbjct: 479 GCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEP 538
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NS + VLL NIYA++G+W EVA+ + ++G++KVPG S IEI + +H
Sbjct: 539 KNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVH 588
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 193/410 (47%), Gaps = 43/410 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ L+ AC+ ++ + G+++H H+L C D +H ++ MY K G EDAR VFD
Sbjct: 105 TFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQS 164
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW A+I+G ++ G A+EL+
Sbjct: 165 SHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFK 224
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M+++ + PD+ T +++ AC+ + LGRQ+H+ + GS+L NALI +Y K
Sbjct: 225 EMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIA 283
+ A +F ++ KD+ SW ++I G++ ++ A +F EM ESPN + +I+
Sbjct: 285 EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILP 344
Query: 284 GVASCSNANEAMSLFSEMGDR-ELIPDGLTVR-SLLCACTSPLSLYQGMQIHSYIIKKGF 341
A + + + R + + + ++R SL+ + Q+ ++ +
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404
Query: 342 YS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
S N + + +A F +FS M +PD ITF ++ AC+ L++G +
Sbjct: 405 SSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 401 IMKTGLALDVFVMNGLM-DMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + G M D+ G A E+ N ME DPD V W SL+
Sbjct: 465 MTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLL 514
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 174/384 (45%), Gaps = 48/384 (12%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+ S + FD+I W+ L S + Y EAL F + TN + ST ++
Sbjct: 185 IXSAQKMFDEIPVKDVVSWN-ALISGYAETGNYKEALELFKEMMK-TNVKPDESTMVTVL 242
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ S++LGR+VH I + + N ++++Y KCG +E A +F+ + ++V+
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVI 302
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +I G + A+ L+ +ML+SG P++ T SI+ AC+ L + +GR +H ++
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYI 362
Query: 208 IKSEHGSHLIS--QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
K G S + +LI MY K I A VF S+ + ++SW +MI GF
Sbjct: 363 DKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGF-------- 414
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
A AN A +FS M + PD +T LL AC+
Sbjct: 415 --------------------AMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGM 454
Query: 326 LYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLAS-QTKPDHITFN 379
L G I + + Y P C L +G LF+ M+ S + PD + +
Sbjct: 455 LDLGRHIFRSMTED--YKITPKLEHYGCMIDLLGHSG-LFKEAEEMINSMEMDPDGVIWC 511
Query: 380 DVMGACAAMASLEMGTQLHCYIMK 403
++ AC ++E+G ++K
Sbjct: 512 SLLKACKMHGNVELGESFAQNLIK 535
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV---KCGSLGSARELFNFMEDPDV 441
C + SL + +H ++KTGL + ++ L++ V L A +F+ +++P++
Sbjct: 12 CKTLQSLRI---IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNL 68
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+ W+++ G+A AL L+ M S G+ PN T +L AC+ EG Q++
Sbjct: 69 LIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGH 128
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ + G + ++ + + GR +A +Q + D+V + +L+ ++G +
Sbjct: 129 VL-KLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSH-RDVVSYTALIKGYASNGYIX 186
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
++ + I D + AL+ + YA +G ++E L M + V+ P +S
Sbjct: 187 SAQKMFDEIPVKDVVSWNALI---SGYAETGNYKEALELFKEMMKTNVK--PDES 236
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V DS L R W+ +F ++ A AFD I
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA----MHGRANPAFDIFSRMRKDGIE 436
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARM 136
P T+ L+SACS L LGR + + K P + ++++ G G ++A
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEE 496
Query: 137 VFDEMP-QRNVVSWTAMIAGCSQNGQ 161
+ + M + V W +++ C +G
Sbjct: 497 MINSMEMDPDGVIWCSLLKACKMHGN 522
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 203/611 (33%), Positives = 314/611 (51%), Gaps = 69/611 (11%)
Query: 53 SLCKQNLYNEALVAFDFLQ--NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
SL KQ EA DFL+ ++ + + P +Y L AC LRSL GR +HD + +
Sbjct: 61 SLSKQGKLKEA---HDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTV 117
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
P + N +L MY CGS D + VFDEM +N+VSW +I+ ++NG+ AI L+
Sbjct: 118 KNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFS 177
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M SG+ P+ + S++++C G + LG+Q+H+HVI+++ +++ + A+ MY +
Sbjct: 178 DMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVR-- 235
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
W L+ A+ VF+ M++ N +W ++ G
Sbjct: 236 -----------------CGW---------LEGAKLVFDGMDAQNAVTWTGLMVGYTQAKK 269
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
A+ LF+ M + D +L C G QIHS+I+K G S V V
Sbjct: 270 LEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTP 329
Query: 351 ILQ---------------------------------HQAGEL---FRLFSLMLASQTKPD 374
++ Q+G L ++F+ + + +
Sbjct: 330 LVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLN 389
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+ V ACAA A+L MG+Q H +K GL ++ + ++ MY KCG L AR F
Sbjct: 390 SFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFE 449
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+++PD V+W+++I GYA G EAL FRRM+S GVRPN VT + VLTACSH GLV E
Sbjct: 450 SIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAE 509
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
Q M +YG+ PT + C++D +RAG + EA + IN+M F+ D + WKSLL C
Sbjct: 510 AKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGC 569
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
H ++ +GK AAEN+ ++DP ++A +LL N+Y++ GKWEE + M ER ++K
Sbjct: 570 WAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVS 629
Query: 615 QSWIEIQTKIH 625
SWI ++ ++H
Sbjct: 630 CSWISVKGQVH 640
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 241/519 (46%), Gaps = 49/519 (9%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPST--YADLISACSSLRSLQLGRKVHDHIL 107
+ S+ K +A+ F +Q + IRP++ Y L+ +C L+LG+++H H++
Sbjct: 159 VISAYAKNGELEKAIRLFSDMQASG---IRPNSAVYMSLLQSCLGPSFLELGKQMHSHVI 215
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
++ + + I NMY +CG LE A++VFD M +N V+WT ++ G +Q + A+E
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALE 275
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L+ +M G+ D+F F +++ C L +G+Q+H+H++K S + L+ Y
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYV 335
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAG 284
K I A+ F I+ + SW ++I GFS +L+ +F + S + + I
Sbjct: 336 KCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395
Query: 285 VASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
V A +++ S+ GD I GL S L ++ +++Y Y ++ F S
Sbjct: 396 VFQACAAQANLNMGSQAHGD--AIKRGLV--SYLYGESAMVTMYSKCGRLDY-ARRAFES 450
Query: 344 ----NVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACA-----AMA 389
+ AI+ A E F M + +P+ +TF V+ AC+ A A
Sbjct: 451 IDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEA 510
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+G+ Y +K +D + + ++D Y + G L A EL N M +PD +SW SL+
Sbjct: 511 KQYLGSMSRDYGVKP--TIDHY--DCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLL 566
Query: 449 VG---YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
G + G+ A + R+ G ++ L + +A G EE + ++M
Sbjct: 567 GGCWAHCDLKLGKIAAENLFRL-DPGDTAGYILLFNLYSA---FGKWEEAGHVRKLMAER 622
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
++ SC ++ G+VH +N+ +DD+
Sbjct: 623 ----ELKKEVSC--SWISVKGQVHRPVRLLNE---EDDV 652
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 206/647 (31%), Positives = 336/647 (51%), Gaps = 79/647 (12%)
Query: 30 QAGEVVDSFLRRFDDIWD-FDLFSSLCKQNLYNEALV------------AFDFLQNNTNF 76
Q G + S RF ++ D + +F + K+NL++ ++ A D
Sbjct: 142 QLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWV 201
Query: 77 RIRPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
++P Y ++ C + +L GR++H H++ + D + N ++ MY KCG + A
Sbjct: 202 GVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTA 261
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R+VFD+MP R+ +SW AMI+G +NG + L+ M++ + PD T S+I AC L
Sbjct: 262 RLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELL 321
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
LGRQ+H +V+++E G N+LI MY+ I +A
Sbjct: 322 GDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEA------------------- 362
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
TVF+ E +L SW +I+G +C +A+ + M ++PD +T+
Sbjct: 363 ---------ETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIA 413
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR----- 361
+L AC+ +L GM +H +KG S V N+++ +A E+F
Sbjct: 414 IVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEK 473
Query: 362 ----------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
F + + KP+ +T V+ ACA + +L G ++H
Sbjct: 474 NIVSWTSIILGLRINNRCFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGKEIHA 533
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ ++TG++ D F+ N ++DMYV+CG + A + F F D +V SW+ L+ GYA+ G G
Sbjct: 534 HALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF-FSVDHEVTSWNILLTGYAERGKGAH 592
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
A +LF+RM S V PN VT + +L ACS G+V EGL+ + M+ +Y I+P + +CVV
Sbjct: 593 ATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVV 652
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DLL R+G++ EA +FI +M D VW +LL SC+ H +V++G+ AAENI + D T+
Sbjct: 653 DLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVG 712
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+LL N+YA +GKW++VA + M++ G+ PG SW+E++ +HA
Sbjct: 713 YYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHA 759
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 162/588 (27%), Positives = 263/588 (44%), Gaps = 85/588 (14%)
Query: 66 AFDFLQNNTNFRI--RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A +L + RI Y LI C R+ + G +V+ ++ S L N +L+
Sbjct: 90 AMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLS 149
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
M+ + G+L DA VF M +RN+ SW ++ G ++ G + A++LY +ML G+ PD +T
Sbjct: 150 MFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYT 209
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F ++R C G+ + GR++H HVI+ S + NALI MY K + A VF +
Sbjct: 210 FPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMP 269
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+D SW +MI G+ + GV E + LF M
Sbjct: 270 NRDRISWNAMISGYFE-----------------------NGVCL-----EGLRLFGMMIK 301
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQ 355
+ PD +T+ S++ AC G QIH Y+++ F + + N++ L +
Sbjct: 302 YPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEE 361
Query: 356 AGELF----------------------------RLFSLMLASQTKPDHITFNDVMGACAA 387
A +F + +M A PD IT V+ AC+
Sbjct: 362 AETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSC 421
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ +L+MG LH + GL V N L+DMY KC + A E+F+ + ++VSW+S+
Sbjct: 422 LCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSI 481
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQ 503
I+G EAL FR M ++PN VTLV VL+AC+ +G + G +++ R
Sbjct: 482 ILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGV 540
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN---- 559
+ G +P + ++D+ R GR+ A + + D ++ W LL G
Sbjct: 541 SFDGFMP-----NAILDMYVRCGRMEYA--WKQFFSVDHEVTSWNILLTGYAERGKGAHA 593
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
++ +R E+ + P + +LC + SG E SMK +
Sbjct: 594 TELFQRMVES--NVSPNEVTFISILCAC-SRSGMVAEGLEYFNSMKYK 638
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 40/311 (12%)
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N+ I + N + AMS M + + + +L+ C + +G +++SY+
Sbjct: 75 NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134
Query: 339 KGFYSNVPVCNAILQ---------------------------------HQAG---ELFRL 362
+ ++ + NA+L +AG E L
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
+ ML KPD TF V+ C M +L G ++H ++++ G DV V+N L+ MYVK
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVK 254
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG + +AR +F+ M + D +SW+++I GY + G E L+LF M V P+ +T+ V
Sbjct: 255 CGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSV 314
Query: 483 LTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+TAC +G G Q++ +++ E+G P+ + ++ + + G + EAE ++
Sbjct: 315 ITACELLGDDRLGRQIHGYVLRTEFGRDPSIH--NSLIPMYSSVGLIEEAETVFSRTEC- 371
Query: 542 DDIVVWKSLLA 552
D+V W ++++
Sbjct: 372 RDLVSWTAMIS 382
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 207/623 (33%), Positives = 319/623 (51%), Gaps = 75/623 (12%)
Query: 83 YADLISACSS---LRSLQLGRKVHDHILSSKCQ-PDAVLHNHILNMYGKCGSLEDARMVF 138
YA ++S+ + +++ VH IL + Q P L NH+L Y K G L AR VF
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 139 DEMP-------------------------------QRNVVSWTAMIAGCSQNGQENAAIE 167
DEMP +R+ VS+ A+I G S G +++
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131
Query: 168 LYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
LY +L + + P + T ++I S L LG +H V++ G++ + L+ MY
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIA 283
K I DA VF + K + + ++I G + ++ A+ +F M + +W T++
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVT 251
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G+ EA+ +F M + D T S+L AC + + +G QIH+YI + +
Sbjct: 252 GLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYED 311
Query: 344 NVPVCNAILQHQAG------------------------------------ELFRLFSLML 367
NV V +A++ + E R FS M
Sbjct: 312 NVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQ 371
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
KPD T V+ +CA +ASLE G Q HC + +GL + V N L+ +Y KCGS+
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A LF+ M D VSW++L+ GYAQFG +E + LF +M +G++P+ VT +GVL+ACS
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACS 491
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
GLVE+G + MQ ++ I+P + +C++DL +R+GR EAE+FI QM D W
Sbjct: 492 RAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL+SC+ GN+++GK AAEN+L+ DP N A+ VLLC+++A+ G+W EVA L M++R
Sbjct: 552 ATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDR 611
Query: 608 GVRKVPGQSWIEIQTKIHASGND 630
V+K PG SWI+ + K+H D
Sbjct: 612 QVKKEPGCSWIKYKNKVHIFSAD 634
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 187/445 (42%), Gaps = 105/445 (23%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP+ T + +I S+L LG VH +L A + + +++MY K G + DAR
Sbjct: 142 VRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDAR 201
Query: 136 MVFDEMPQRNVV-------------------------------SWTAMIAGCSQNGQENA 164
VF EM + VV +WT M+ G +QNG +
Sbjct: 202 RVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLE 261
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A++++ +M G+ DQ+TFGSI+ AC L G+Q+HA++ ++ + ++ +AL+
Sbjct: 262 ALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVD 321
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY+K I A VF + ++I SW +MI G+ G
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGY--------------------------G 355
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+CS EA+ FSEM + PD T+ S++ +C + SL +G Q H + G
Sbjct: 356 QNACS--EEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 345 VPVCNAILQ------------------------------------HQAGELFRLFSLMLA 368
+ V NA++ +A E LF ML
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLV 473
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG----LMDMYVKCG 424
+ KPD +TF V+ AC+ +E G + K D+ ++ ++D+Y + G
Sbjct: 474 NGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH---DIVPIDDHYTCMIDLYSRSG 530
Query: 425 SLGSARELFNFM-EDPDVVSWSSLI 448
A E M PD W++L+
Sbjct: 531 RFKEAEEFIKQMPHSPDAFGWATLL 555
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 166/375 (44%), Gaps = 37/375 (9%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C +++ A + + R W + + L + L EAL F ++ I T+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWT-TMVTGLTQNGLQLEALDVFRRMRAE-GVGIDQYTFG 282
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC +L + + G+++H +I + + + + + +++MY KC S+ A VF M R
Sbjct: 283 SILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N++SWTAMI G QN A+ + +M G+ PD FT GS+I +C+ L + G Q H
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ S ++ NAL+ +Y K I DA +F ++ D SW +++ G+++
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQF---- 458
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
A E + LF +M L PDG+T +L AC+
Sbjct: 459 ------------------------GKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAG 494
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ +G + K + VP+ C L ++G + PD +
Sbjct: 495 LVEKGCDYFDSMQKD--HDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552
Query: 380 DVMGACAAMASLEMG 394
++ +C ++E+G
Sbjct: 553 TLLSSCRLRGNMEIG 567
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/611 (33%), Positives = 314/611 (51%), Gaps = 69/611 (11%)
Query: 53 SLCKQNLYNEALVAFDFLQ--NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
SL KQ EA DFL+ ++ + + P +Y L AC LRSL GR +HD + +
Sbjct: 61 SLSKQGKLKEA---HDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTV 117
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
P + N +L MY CGS D + VFDEM +N+VSW +I+ ++NG+ AI L+
Sbjct: 118 KNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFS 177
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M SG+ P+ + S++++C G + LG+Q+H+HVI+++ +++ + A+ MY +
Sbjct: 178 DMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVR-- 235
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
W L+ A+ VF+ M++ N +W ++ G
Sbjct: 236 -----------------CGW---------LEGAKLVFDGMDAQNAVTWTGLMVGYTQAKK 269
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
A+ LF+ M + D +L C G QIHS+I+K G S V V
Sbjct: 270 LEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTP 329
Query: 351 ILQ---------------------------------HQAGEL---FRLFSLMLASQTKPD 374
++ Q+G L ++F+ + + +
Sbjct: 330 LVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLN 389
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+ V ACAA A+L MG+Q H +K GL ++ + ++ MY KCG L AR F
Sbjct: 390 SFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFE 449
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+++PD V+W+++I GYA G EAL FRRM+S GVRPN VT + VLTACSH GLV E
Sbjct: 450 SIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAE 509
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
Q M +YG+ PT + C++D +RAG + EA + IN+M F+ D + WKSLL C
Sbjct: 510 AKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGC 569
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
H ++ +GK AAEN+ ++DP ++A +LL N+Y++ GKWEE + M ER ++K
Sbjct: 570 WAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVS 629
Query: 615 QSWIEIQTKIH 625
SWI ++ ++H
Sbjct: 630 CSWISVKGQVH 640
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 204/422 (48%), Gaps = 33/422 (7%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPST--YADLISACSSLRSLQLGRKVHDHIL 107
+ S+ K +A+ F +Q + IRP++ Y L+ +C L+LG+++H H++
Sbjct: 159 VISAYAKNGELEKAIRLFSDMQASG---IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVI 215
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
++ + + I NMY +CG LE A++VFD M +N V+WT ++ G +Q + A+E
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALE 275
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L+ +M G+ D+F F +++ C GL +GRQ+H+H++K S + L+ Y
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYV 335
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAG 284
K I A+ F I+ + SW ++I GFS +L+ +F + S + + I
Sbjct: 336 KCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395
Query: 285 VASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
V A +++ S+ GD I GL S L ++ +++Y Y ++ F S
Sbjct: 396 VFQACAAQANLNMGSQAHGD--AIKRGLV--SYLYGESAMVTMYSKCGRLDY-ARRAFES 450
Query: 344 ----NVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACA-----AMA 389
+ AI+ A E F M + +P+ +TF V+ AC+ A A
Sbjct: 451 IDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEA 510
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+G+ Y +K +D + + ++D Y + G L A EL N M +PD +SW SL+
Sbjct: 511 KQYLGSMSRDYGVKP--TIDHY--DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566
Query: 449 VG 450
G
Sbjct: 567 GG 568
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 329/654 (50%), Gaps = 109/654 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T A + CS L LG ++H + D V + +++MY KC SLED+ VF E
Sbjct: 158 TTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSE 217
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P +N +SW+A IAGC QN Q ++L+ +M + G+ Q T+ S+ R+C+GL LG
Sbjct: 218 LPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLG 277
Query: 201 RQLHAHVIKSEHGSHLI-------------------------------SQNALIAMYTKF 229
QLH H +K++ GS +I S NA+I Y +
Sbjct: 278 TQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARN 337
Query: 230 DRILDAWNVFSSIARKDIT----------SWGSMIDGFSK-------------------- 259
++ A+ +F + + + S ++I G S+
Sbjct: 338 EQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVA 397
Query: 260 ---LDF---------ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
LD A +F+EME + SWN II + + +S F M ++
Sbjct: 398 NAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKME 457
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------YS----------- 343
PD T S+L AC + GM++H IIK G YS
Sbjct: 458 PDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Query: 344 ------------NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
N + LQ ++ + R FS ML +PD+ T+ V+ CA +A++
Sbjct: 518 HYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATV 577
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+G Q+H ++K L DV++ + L+DMY KCG++ + +F D V+W+++I G+
Sbjct: 578 GLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGF 637
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G GEEAL+LF M ++PNH T V VL ACSHVG ++GL ++ M + Y + P
Sbjct: 638 AYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQ 697
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E SC+VD+L R+G+V EA I M F+ D ++W++LL+ CK GNV+V ++AA ++L
Sbjct: 698 LEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLL 757
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
K+DP +S+A LL NIYA +G W++V+++ +M+ ++K PG SWIE++ ++H
Sbjct: 758 KLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVH 811
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/628 (24%), Positives = 262/628 (41%), Gaps = 146/628 (23%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ + CS+ R+L+ G++ H H++ S P + N ++ MY KC +LE A VF+EM
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 142 PQRN--------------------------------VVSWTAMIAGCSQNGQENAAIELY 169
PQR+ VVSW ++I+G QNG +I ++
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
++M G+M D T ++ CS L LG Q+H ++ +++ +AL+ MY K
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FARTVFNEMESPNLASWNTIIAGV- 285
+ + D+ +VFS + K+ SW + I G + D +F EM+ + + A V
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 286 --------------------------------------ASCSNANEAMSLFSEMGDRELI 307
A C N ++A LFS + D L
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325
Query: 308 P-------------------------------DGLTVRSLLCACTSPLSLYQGMQIHSYI 336
D +++ L A +G+Q+H
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385
Query: 337 IKKGFYSNVPVCNAIL------------------------------------QHQAGELF 360
IK SN+ V NAIL G+
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
F ML S+ +PD T+ V+ ACA + G ++H I+K+G+ L +FV + L+DMY
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMY 505
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCG + A ++ +E+ +VSW+++I G++ E++ + F M GV P++ T
Sbjct: 506 SKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYA 565
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
VL C+++ V G Q++ M + ++ S +VD+ ++ G +H++ + + A
Sbjct: 566 TVLDTCANLATVGLGKQIHAQMI-KLELLSDVYITSTLVDMYSKCGNMHDSL-LMFRKAP 623
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAE 568
D V W +++ HG +G+ A E
Sbjct: 624 KRDSVTWNAMICGFAYHG---LGEEALE 648
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 306/567 (53%), Gaps = 69/567 (12%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
AF+ + I P+ T+ L+++C++ +L GR++H HI + D V+ N ++
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALIT 323
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA-----AIELYVQMLQSGLM 178
MY KC ++DAR FD M +R+V+SW+AMIAG +Q+G ++ +L +M + G+
Sbjct: 324 MYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVF 383
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P++ TF SI++ACS + GRQ+HA + K S Q A+ MY K I +A V
Sbjct: 384 PNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQV 443
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
FS +ME+ N+ +W +++ C + A +F
Sbjct: 444 FS----------------------------KMENKNVVAWASLLTMYIKCGDLTSAEKVF 475
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE 358
SEM R ++ L + G+ + + +
Sbjct: 476 SEMSTRNVVSWNLMI-------------------------AGYAQSGDI---------AK 501
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
+F L S M +PD +T ++ AC A+++LE G +H +K GL D V L+
Sbjct: 502 VFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIG 561
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY KCG + AR +F+ + + D V+W++++ GY Q G G EA+ LF+RM V PN +T
Sbjct: 562 MYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEIT 621
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
V++AC GLV+EG +++RIMQ ++ + P ++ C+VDLL RAGR+ EAE+FI +M
Sbjct: 622 FTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRM 681
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
+ DI VW +LL +CK+H NV + + AA +IL+++P+N++ V L NIYA +G+W++
Sbjct: 682 PCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDST 741
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ M ++G++K G+S IEI +IH
Sbjct: 742 KVRKVMDDKGLKKDRGESSIEIDGRIH 768
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 159/638 (24%), Positives = 273/638 (42%), Gaps = 111/638 (17%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
LCK EA+ ++ + +TY +I C+ LR + G+ VH +
Sbjct: 53 LCKAGRLKEAIQLLGIIKQR-GLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAI 111
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D L N ++N Y K G + VF M R+VV+W++MIA + N A + + +M
Sbjct: 112 DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ + P++ TF SI++AC+ + R++H V S + + ALI MY+K I
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
A +F + +++ SW II A NE
Sbjct: 232 LACEIFQKMKERNVV----------------------------SWTAIIQANAQHRKLNE 263
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
A L+ +M + P+ +T SLL +C +P +L +G +IHS+I ++G ++V V NA++
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALIT 323
Query: 354 ---------------------------------HQAG--------ELFRLFSLMLASQTK 372
Q+G E+F+L M
Sbjct: 324 MYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVF 383
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ +TF ++ AC+ +LE G Q+H I K G D + + +MY KCGS+ A ++
Sbjct: 384 PNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQV 443
Query: 433 FNFMEDPDVVSWSSL-------------------------------IVGYAQFGCGEEAL 461
F+ ME+ +VV+W+SL I GYAQ G +
Sbjct: 444 FSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVF 503
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+L M+ G +P+ VT++ +L AC + +E G +L + G+ + ++ +
Sbjct: 504 ELLSSMKVEGFQPDRVTIISILEACGALSALERG-KLVHAEAVKLGLESDTVVATSLIGM 562
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTN 577
++ G V EA ++++ + D V W ++LA HG VD+ KR + + +
Sbjct: 563 YSKCGEVTEARTVFDKIS-NRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEIT 621
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
A++ C + E+ R+M + R PG+
Sbjct: 622 FTAVISACGRAGLVQEGREIFRIM----QEDFRMKPGK 655
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 323/590 (54%), Gaps = 49/590 (8%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP--- 142
++S +S + K + S +PD V N I++ Y + G E+A F EM
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 143 --QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ NVVSWTA+IAG QNG + A+ ++ +M+ G+ P+ T S + AC+ L + G
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381
Query: 201 RQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS- 258
R++H + IK E S L+ N+L+ Y K + A F I + D+ SW +M+ G++
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441
Query: 259 --KLDFARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+ A + +EM+ P++ +WN ++ G + A+ F M + P+ T
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKK-------------GFYS---------------- 343
+ L AC +L G +IH Y+++ YS
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561
Query: 344 --NVPVCNAILQH--QAGELFRLFSL---MLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+V V N+I+ Q+G L M S + + +T + AC+ +A+L G +
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H +I++ GL F++N L+DMY +CGS+ +R +F+ M D+VSW+ +I Y G
Sbjct: 622 IHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGF 681
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G +A+ LF++ R+ G++PNH+T +L+ACSH GL+EEG + +++M+ EY + P E+ +
Sbjct: 682 GMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYA 741
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL+RAG+ +E +FI +M F+ + VW SLL +C+ H N D+ + AA + +++P
Sbjct: 742 CMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQ 801
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+S VL+ NIY+++G+WE+ A++ MKERGV K PG SWIE++ K+H+
Sbjct: 802 SSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHS 851
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 242/525 (46%), Gaps = 86/525 (16%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
YA ++ C L +L+LG +VH ++ + L + +L +Y + G +EDAR +FD+M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RNV SWTA++ G I+L+ M+ G+ PD F F + +ACS L +G+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF-SKLD 261
++ +++ + + +++ M+ K R+ A F I KD+ W M+ G+ SK +
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 262 FARTV--FNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
F + + ++M+ P+ +WN II+G A EA F EMG GL
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMG-------GL---- 320
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--QHQAGELFR---LFSLMLASQ 370
K F NV A++ Q G F +F M+
Sbjct: 321 -----------------------KDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSA 429
KP+ IT + AC ++ L G ++H Y +K L D+ V N L+D Y KC S+ A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417
Query: 430 RELFNFME-----------------------------------DPDVVSWSSLIVGYAQF 454
R F ++ +PD+++W+ L+ G+ Q+
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRE 513
G G+ AL+ F+RM S G+ PN T+ G L AC V ++ G +++ +++N I +
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH--IELSTG 535
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S ++ + + + A ++++ D+VVW S++++C G
Sbjct: 536 VGSALISMYSGCDSLEVACSVFSELS-TRDVVVWNSIISACAQSG 579
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 60 YNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
Y + A +F Q + + P +T + ++AC +R+L+LG+++H ++L + + +
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ +++MY C SLE A VF E+ R+VV W ++I+ C+Q+G+ A++L +M S +
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
+ T S + ACS L + G+++H +I+ + N+LI MY + I +
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 656
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+F + ++D+ SW MI + F +A++L
Sbjct: 657 IFDLMPQRDLVSWNVMISVYGMHGFGM----------------------------DAVNL 688
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAIL 352
F + L P+ +T +LL AC+ + +G + + + K Y+ P C L
Sbjct: 689 FQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKY--FKMMKTEYAMDPAVEQYACMVDL 746
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+AG+ + +P+ + ++GAC
Sbjct: 747 LSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 779
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 SLCKQNLYNEALVAFDFLQ--NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
S C Q+ ++ A D L+ N +N + T + ACS L +L+ G+++H I+
Sbjct: 573 SACAQS--GRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG 630
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
+ N +++MYG+CGS++ +R +FD MPQR++VSW MI+ +G A+ L+
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQ 690
Query: 171 QMLQSGLMPDQFTFGSIIRACS 192
Q GL P+ TF +++ ACS
Sbjct: 691 QFRTMGLKPNHITFTNLLSACS 712
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 53/267 (19%)
Query: 371 TKPDHIT--FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
T PD + ++ C + +L +G Q+H ++ G+ + F+ + L+++Y + G +
Sbjct: 83 TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 142
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
AR +F+ M + +V SW++++ Y G EE +KLF M + GVRP+H V ACS
Sbjct: 143 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 202
Query: 489 VGLVEEGLQLYRIMQNEYGIIPT--RERRSCV----VDLLARAGRVHEAEDFINQMAFDD 542
L+ YR+ ++ Y + + E SCV +D+ + GR+ A F ++ F D
Sbjct: 203 -------LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 255
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+ +W +++ Y S G++++ + +
Sbjct: 256 -VFMWNIMVSG----------------------------------YTSKGEFKKALKCIS 280
Query: 603 SMKERGVRKVPGQ-SWIEIQTKIHASG 628
MK GV+ P Q +W I + SG
Sbjct: 281 DMKLSGVK--PDQVTWNAIISGYAQSG 305
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 316/581 (54%), Gaps = 64/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T A L++AC+S+ L G+++H ++L + PD ++ +L++Y KCG + +A +F
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ NVV W M+ Q + +L+ QM+ +G+ P++FT+ ++R C+ + LG
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H IK+ S + LI MY+K+ W LD
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKY-----GW-----------------------LD 397
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR + +E+ ++ SW ++IAG EA+ F +M + PD + + S + AC
Sbjct: 398 KARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACA 457
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------LQH-------- 354
++ QG QIHS + G+ ++V + NA+ ++H
Sbjct: 458 GIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNG 517
Query: 355 ------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
Q+G E +F M + K + TF + A A +A ++ G Q+H ++KTG
Sbjct: 518 MVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTG 577
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ V N L+ +Y KCGS+ A+ F M + + VSW+++I +Q G G EAL LF
Sbjct: 578 CTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFD 637
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ G++PN VT +GVL ACSHVGLVEEGL ++ M +E+GI P + +CVVD+L RA
Sbjct: 638 QMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRA 697
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ A F+ +M + +VW++LL++C+ H N+++G+ AA+ +L+++P +SA+ VLL
Sbjct: 698 GQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLS 757
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N YA +GKW + MK+RGVRK PG+SWIE++ +HA
Sbjct: 758 NAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHA 798
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 239/504 (47%), Gaps = 68/504 (13%)
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
S++ L +H ++ D + N ++++Y K G ++ AR VF+++ R+ VSW A
Sbjct: 54 SVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVA 113
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
M++G ++NG A+ LY QM SG++P + S++ AC+ GR +HA V K
Sbjct: 114 MLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQG 173
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEME 271
S + NALIA+Y + F L A VF+EM
Sbjct: 174 SCSETVVGNALIALYLR----------------------------FGSLSLAERVFSEMP 205
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
+ ++NT+I+ A C N A+ +F EM PD +T+ SLL AC S L +G Q
Sbjct: 206 YCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQ 265
Query: 332 IHSYIIKKGFYSNVPVCNAILQH--------QAGELFR---------------------- 361
+HSY++K G + + ++L +A E+F+
Sbjct: 266 LHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISD 325
Query: 362 ------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
LF M+A+ +P+ T+ ++ C + +G Q+H +KTG D++V
Sbjct: 326 LAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGV 385
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+DMY K G L AR + +E DVVSW+S+I GY Q +EAL+ F+ M+ G+ P+
Sbjct: 386 LIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPD 445
Query: 476 HVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
++ L ++AC+ + + +G Q++ R+ + Y + +V+L AR GR EA
Sbjct: 446 NIGLASAISACAGIKAMRQGQQIHSRVYVSGYS--ADVSIWNALVNLYARCGRSKEAFSL 503
Query: 535 INQMAFDDDIVVWKSLLASCKTHG 558
+ D I W +++ G
Sbjct: 504 FEAIEHKDKI-TWNGMVSGFAQSG 526
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 237/515 (46%), Gaps = 66/515 (12%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P + ++SAC+ + GR VH + + V+ N ++ +Y + GSL A VF
Sbjct: 143 PYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFS 202
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EMP + V++ +I+ +Q G +A+E++ +M SG PD T S++ AC+ + +
Sbjct: 203 EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+QLH++++K+ I + +L+ +Y K I++A +F S R
Sbjct: 263 GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDR--------------- 307
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
N+ WN ++ S+ ++ LF +M + P+ T LL
Sbjct: 308 -------------TNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRT 354
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
CT + G QIH IK GF S++ V ++
Sbjct: 355 CTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSW 414
Query: 353 --------QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
QH+ E F M PD+I + ACA + ++ G Q+H +
Sbjct: 415 TSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYV 474
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + DV + N L+++Y +CG A LF +E D ++W+ ++ G+AQ G EEAL++
Sbjct: 475 SGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEV 534
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F +M +GV+ N T V ++A +++ +++G Q++ + G E + ++ L
Sbjct: 535 FIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYG 593
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + +A+ +M+ + + V W +++ SC HG
Sbjct: 594 KCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQHG 627
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 33/209 (15%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H + GL D N L+D+Y K G + AR +F + D VSW +++ GYA+ G
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG----LQLYR-------IMQN- 504
GEEA+ L+ +M SGV P L VL+AC+ L E+G Q+Y+ ++ N
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 505 ------EYGIIPTRERR------------SCVVDLLARAGRVHEAEDFINQM---AFDDD 543
+G + ER + ++ A+ G A + +M + D
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILK 572
V SLLA+C + G+++ GK+ +LK
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLK 272
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 214/699 (30%), Positives = 350/699 (50%), Gaps = 123/699 (17%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKV 102
+W+ + +L L++EAL + Q R++P TY +I+AC+ L ++ + +
Sbjct: 82 LWN-SIIRALTHNGLFSEALSLYSETQR---IRLQPDTYTFPSVINACAGLLDFEMAKSI 137
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
HD +L D + N +++MY + L+ AR VF+EMP R+VVSW ++I+G + NG
Sbjct: 138 HDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYW 197
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
N A+E+Y + G++PD +T S++RAC GL V G +H + K +I N L
Sbjct: 198 NEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGL 257
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK----------------------- 259
++MY KF+ ++D +F + +D SW +MI G+S+
Sbjct: 258 LSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLL 317
Query: 260 --------------LDFARTVFNEM-----ESPNLASWNTIIAGVASCSNANEAMSLFS- 299
L+F + V + M E AS N +I A C N + +FS
Sbjct: 318 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS-NILINMYAKCGNLLASQEVFSG 376
Query: 300 -----------------------------EMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+M ++ PD +T LL T L+ G
Sbjct: 377 MKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGK 436
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMGA- 384
++H + K GF SN+ V N ++ A G+ ++F M A D IT+N ++ +
Sbjct: 437 ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR----DIITWNTIIASC 492
Query: 385 ----------------------------------CAAMASLEMGTQLHCYIMKTGLALDV 410
C+ +A+ G ++H I K GL DV
Sbjct: 493 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 552
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V N L++MY KCGSL ++ ++F M+ DVV+W++LI +G G++A++ F M ++
Sbjct: 553 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 612
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G+ P+HV V ++ ACSH GLVEEGL + M+ +Y I P E +CVVDLL+R+ + +
Sbjct: 613 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDK 672
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
AEDFI M D +W +LL++C+ G+ ++ +R +E I++++P ++ VL+ NIYA+
Sbjct: 673 AEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAA 732
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGN 629
GKW++V + S+K RG++K PG SW+EIQ K++ G
Sbjct: 733 LGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGT 771
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 147/560 (26%), Positives = 259/560 (46%), Gaps = 73/560 (13%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R + ++ + A +S + K+H I++ + ++ Y + VF
Sbjct: 12 RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 71
Query: 139 D-EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
P NV W ++I + NG + A+ LY + + L PD +TF S+I AC+GL
Sbjct: 72 RLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDF 131
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
+ + +H V+ GS L NALI MY +F+ + A VF + +D+ SW S+I G+
Sbjct: 132 EMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGY 191
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+ + W NEA+ ++ + ++PD T+ S+L
Sbjct: 192 NANGY---------------W-------------NEALEIYYRFRNLGVVPDSYTMSSVL 223
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------ 353
AC S+ +G IH I K G +V V N +L
Sbjct: 224 RACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAV 283
Query: 354 ---------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
Q G E +LF + + +Q KPD +T ++ AC + LE G +H Y+
Sbjct: 284 SWNTMICGYSQVGLYEESIKLF-MEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYM 342
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+ +G D N L++MY KCG+L +++E+F+ M+ D VSW+S+I Y Q G +EA+
Sbjct: 343 ITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAM 402
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
KLF+ M++ V+P+ VT V +L+ + +G + G +L+ + + G + +VD+
Sbjct: 403 KLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLA-KMGFNSNIVVSNTLVDM 460
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSA 579
A+ G + ++ M DI+ W +++ASC + ++G R + + P +
Sbjct: 461 YAKCGEMGDSLKVFENMK-ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMAT 519
Query: 580 ALVLL--CNIYASSGKWEEV 597
L +L C++ A+ + +E+
Sbjct: 520 MLSILPVCSLLAAKRQGKEI 539
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 322/590 (54%), Gaps = 49/590 (8%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP--- 142
++S +S + K + S +PD V N I++ Y + G E+A F EM
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 143 --QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ NVVSWTA+IAG QNG + A+ ++ +M+ G+ P+ T S + AC+ L + G
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381
Query: 201 RQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS- 258
R++H + IK E S L+ N+L+ Y K + A F I + D+ SW +M+ G++
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYAL 441
Query: 259 --KLDFARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+ A + +EM+ P++ +WN ++ G + A+ F M + P+ T
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKK-------------GFYS---------------- 343
+ L AC +L G +IH Y+++ YS
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561
Query: 344 --NVPVCNAILQH--QAGELFRLFSL---MLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+V V N+I+ Q+G L M S + + +T + AC+ +A+L G +
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H +I++ GL F++N L+DMY +CGS+ +R +F+ M D+VSW+ +I Y G
Sbjct: 622 IHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGF 681
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G +A+ LF+ R+ G++PNH+T +L+ACSH GL+EEG + +++M+ EY + P E+ +
Sbjct: 682 GMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYA 741
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL+RAG+ +E +FI +M F+ + VW SLL +C+ H N D+ + AA + +++P
Sbjct: 742 CMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQ 801
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+S VL+ NIY+++G+WE+ A++ MKERGV K PG SWIE++ K+H+
Sbjct: 802 SSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHS 851
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 244/521 (46%), Gaps = 78/521 (14%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
YA ++ C L +L+LG +VH ++ + L + +L +Y + G +EDAR +FD+M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RNV SWTA++ G I+L+ M+ G+ PD F F + +ACS L +G+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF-SKLD 261
++ +++ + + +++ M+ K R+ A F I KD+ W M+ G+ SK +
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 262 FARTV--FNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGD-RELIPDGLTVR 314
F + + ++M+ P+ +WN II+G A EA F EMG ++ P+
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPN----- 326
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
S +L G + + Y +A +FR M+ KP+
Sbjct: 327 -----VVSWTALIAGSEQNGY-----------------DFEALSVFR---KMVLEGVKPN 361
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELF 433
IT + AC ++ L G ++H Y +K L D+ V N L+D Y KC S+ AR F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421
Query: 434 NFME-----------------------------------DPDVVSWSSLIVGYAQFGCGE 458
++ +PD+++W+ L+ G+ Q+G G+
Sbjct: 422 GMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGK 481
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSC 517
AL+ F+RM S G+ PN T+ G L AC V ++ G +++ +++N I + S
Sbjct: 482 AALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH--IELSTGVGSA 539
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ + + + A ++++ D+VVW S++++C G
Sbjct: 540 LISMYSGCDSLEVACSVFSELS-TRDVVVWNSIISACAQSG 579
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 156/333 (46%), Gaps = 37/333 (11%)
Query: 60 YNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
Y + A +F Q + + P +T + ++AC +R+L+LG+++H ++L + + +
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ +++MY C SLE A VF E+ R+VV W ++I+ C+Q+G+ A++L +M S +
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
+ T S + ACS L + G+++H +I+ + N+LI MY + I +
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 656
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+F + ++D+ SW MI + F M++ NL
Sbjct: 657 IFDLMPQRDLVSWNVMISVYGMHGFG------MDAVNL-------------------FQX 691
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAIL 352
F MG L P+ +T +LL AC+ + +G + + + K Y+ P C L
Sbjct: 692 FRTMG---LKPNHITFTNLLSACSHSGLIEEGWKY--FKMMKTEYAMDPAVEQYACMVDL 746
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+AG+ + +P+ + ++GAC
Sbjct: 747 LSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 779
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQ--NNTNFRIRPST 82
C L+ A V R +W+ + S C Q+ ++ A D L+ N +N + T
Sbjct: 547 CDSLEVACSVFSELSTRDVVVWNSII--SACAQS--GRSVNALDLLREMNLSNVEVNTVT 602
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ ACS L +L+ G+++H I+ + N +++MYG+CGS++ +R +FD MP
Sbjct: 603 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
QR++VSW MI+ +G A+ L+ GL P+ TF +++ ACS
Sbjct: 663 QRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACS 712
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 53/267 (19%)
Query: 371 TKPDHIT--FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
T PD + ++ C + +L +G Q+H ++ G+ + F+ + L+++Y + G +
Sbjct: 83 TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 142
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
AR +F+ M + +V SW++++ Y G EE +KLF M + GVRP+H V ACS
Sbjct: 143 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 202
Query: 489 VGLVEEGLQLYRIMQNEYGIIPT--RERRSCV----VDLLARAGRVHEAEDFINQMAFDD 542
L+ YR+ ++ Y + + E SCV +D+ + GR+ A F ++ F D
Sbjct: 203 -------LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKD 255
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+ +W +++ Y S G++++ + +
Sbjct: 256 -VFMWNIMVSG----------------------------------YTSKGEFKKALKCIS 280
Query: 603 SMKERGVRKVPGQ-SWIEIQTKIHASG 628
MK GV+ P Q +W I + SG
Sbjct: 281 DMKLSGVK--PDQVTWNAIISGYAQSG 305
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 309/634 (48%), Gaps = 73/634 (11%)
Query: 43 DDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D+I L S N +EAL+ F ++ + RI P + AC + G +
Sbjct: 79 DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 138
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H + + + + + +L+MY K G + + R VF EMP RNVVSWTA+I G + G
Sbjct: 139 HGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYN 198
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+ + +M +S + D +TF ++AC+ + GR++HA +K N L
Sbjct: 199 KEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTL 258
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
MY K KL++ T+F +M ++ SW TII
Sbjct: 259 ATMYNKC----------------------------GKLEYGLTLFEKMSMRDVVSWTTII 290
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
+ A+ F M + ++ P+ T +++ C + + G Q+H+ I+ G
Sbjct: 291 TTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLA 350
Query: 343 SNVPVCNAILQHQA------------------------------------GELFRLFSLM 366
+++ V N+I+ A E F L S M
Sbjct: 351 ASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWM 410
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
KP V+ AC MA LE G QLH Y++ GL V++ L++MY KCGS+
Sbjct: 411 RMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSI 470
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A +F+ E+ D+VSW+++I GYA+ G E + LF ++ G+RP+ VT +GVL+AC
Sbjct: 471 EEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC 530
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SH GLV+ G + + M +Y I P++E C++DLL RAGR+ +AE I M F D VV
Sbjct: 531 SHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV 590
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W +LL +C+ HG+V+ G+R AE IL+++P + + L NIYAS GKW E A + MK
Sbjct: 591 WSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKS 650
Query: 607 RGVRKVPGQSWIEIQTKI---------HASGNDI 631
+GV K PG SWI+++ + H G DI
Sbjct: 651 KGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDI 684
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 225/491 (45%), Gaps = 70/491 (14%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
H +S P++ N L K G L +AR +FD+M Q++ +SWT +I+G +
Sbjct: 42 HFISQTDLPES---NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSE 98
Query: 165 AIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A+ L+ M ++SGL D F +AC V G LH + +K+ + + +AL+
Sbjct: 99 ALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALL 158
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MYTK +I + VF + +++ SW ++I G + + +
Sbjct: 159 DMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNK------------------- 199
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
EA+ FSEM + D T L AC +L G +IH+ +KKGF
Sbjct: 200 ---------EALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDV 250
Query: 344 NVPVCN--AILQHQAGEL----------------------------------FRLFSLML 367
+ V N A + ++ G+L + F M
Sbjct: 251 SSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMR 310
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
S P+ TF V+ CA +A +E G QLH I+ GLA + V N +M MY KCG L
Sbjct: 311 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 370
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
S+ +F+ M D+VSWS++I GY+Q G EA +L MR G +P L VL+AC
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG 430
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
++ ++E G QL+ + + G+ T S ++++ + G + EA + A +DDIV W
Sbjct: 431 NMAILEHGKQLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEASRIFDA-AENDDIVSW 488
Query: 548 KSLLASCKTHG 558
+++ HG
Sbjct: 489 TAMINGYAEHG 499
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 308/634 (48%), Gaps = 73/634 (11%)
Query: 43 DDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D+I L S N +EAL+ F ++ + RI P + AC + G +
Sbjct: 79 DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 138
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H + + + + + +L+MY K G + + R VF EMP RNVVSWTA+I G + G
Sbjct: 139 HGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYN 198
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+ + +M +S + D +TF ++AC+ + GR++HA +K N L
Sbjct: 199 KEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTL 258
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
MY K KL++ T+F +M ++ SW TII
Sbjct: 259 ATMYNKC----------------------------GKLEYGLTLFEKMSMRDVVSWTTII 290
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
+ A+ F M + ++ P+ T +++ C + + G Q+H+ I+ G
Sbjct: 291 TTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLA 350
Query: 343 SNVPVCNAILQHQA------------------------------------GELFRLFSLM 366
+++ V N+I+ A E F L S M
Sbjct: 351 ASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWM 410
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
KP V+ AC MA LE G QLH Y++ GL V++ L++MY KCGS+
Sbjct: 411 RMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSI 470
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A +F+ E+ D+VSW+++I GYA+ G E + LF ++ G+RP+ VT +GVL+AC
Sbjct: 471 EEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC 530
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SH GLV+ G + M +Y I P++E C++DLL RAGR+ +AE I M F D VV
Sbjct: 531 SHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV 590
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W +LL +C+ HG+V+ G+R AE IL+++P + + L NIYAS GKW E A + MK
Sbjct: 591 WSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKS 650
Query: 607 RGVRKVPGQSWIEIQTKI---------HASGNDI 631
+GV K PG SWI+++ + H G DI
Sbjct: 651 KGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDI 684
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 224/491 (45%), Gaps = 70/491 (14%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
H +S P++ N L K G L +AR +FD+M Q++ +SWT +I+G +
Sbjct: 42 HFISQTDLPES---NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSE 98
Query: 165 AIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A+ L+ M ++SGL D F +AC V G LH + +K+ + + +AL+
Sbjct: 99 ALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALL 158
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MYTK +I + VF + +++ SW ++I G + + +
Sbjct: 159 DMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNK------------------- 199
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
EA+ FSEM + D T L AC +L G +IH+ +KKGF
Sbjct: 200 ---------EALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDV 250
Query: 344 NVPVCN--AILQHQAGEL----------------------------------FRLFSLML 367
+ V N A + ++ G+L + F M
Sbjct: 251 SSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMR 310
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
S P+ TF V+ CA +A +E G QLH I+ GLA + V N +M MY KCG L
Sbjct: 311 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 370
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
S+ +F+ M D+VSWS++I GY Q G EA +L MR G +P L VL+AC
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG 430
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
++ ++E G QL+ + + G+ T S ++++ + G + EA + A +DDIV W
Sbjct: 431 NMAILEHGKQLHAYVLS-IGLEHTAMVLSALINMYCKCGSIEEASRIFDA-AENDDIVSW 488
Query: 548 KSLLASCKTHG 558
+++ HG
Sbjct: 489 TAMINGYAEHG 499
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 216/669 (32%), Positives = 331/669 (49%), Gaps = 116/669 (17%)
Query: 71 QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC--QPDAVLHNHILNMYGKC 128
+ +++ +I+P DL+ C R L+ + VH +L SK VL NH+ + Y KC
Sbjct: 61 KTDSHLQIQP--LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC 118
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
++ A +FD+M QRN SWT +IAG ++NG E + +M G+ PDQF + I+
Sbjct: 119 SDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGIL 178
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSH-------------------------------LI 217
+ C GL + LG +HA ++ SH ++
Sbjct: 179 QICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVV 238
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK------------------ 259
S NA+I +T D LDA+++F + + +T G +K
Sbjct: 239 SWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYA 298
Query: 260 ------------------------LDFARTVFNE--MESPNLASWNTIIAGVASCSNANE 293
L AR++FN + A WN +I+G +
Sbjct: 299 LELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEK 358
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN-VPVCNAIL 352
A+ LF++M ++ D T S+ A + L G ++H+ IK G N V + NA+
Sbjct: 359 ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVA 418
Query: 353 QHQA--GEL----------------------------------FRLFSLMLASQTKPDHI 376
A G L +FS M A P+
Sbjct: 419 NAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQF 478
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
TF+ V+ +CA + LE G Q+H I K GL +D + + L+DMY KCG LG A+++FN +
Sbjct: 479 TFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRI 538
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ D VSW+++I G+AQ G ++AL+LFRRM GV PN VT + VL ACSH GLVEEGL
Sbjct: 539 SNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGL 598
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
Q +++M+ YG++P E +C+VDLL+R G +++A +FI++M + + +VW++LL +C+
Sbjct: 599 QYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRV 658
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
HGNV++G+ AA+ IL NSA VLL N Y SG +++ L MKE+GV+K PG S
Sbjct: 659 HGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCS 718
Query: 617 WIEIQTKIH 625
WI + +H
Sbjct: 719 WISVNGTLH 727
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 302/586 (51%), Gaps = 66/586 (11%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP + A +SACS+L L+ GR+ H + + DA + N ++++Y KC L AR
Sbjct: 211 VRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLAR 270
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD M RN+VSWT MIAG QN + A+ ++ Q+ Q G PD F SI+ +C L
Sbjct: 271 KLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLA 330
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ GRQ+HAH IK+ S +N+LI MY K + + +A
Sbjct: 331 AIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEA-------------------- 370
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
R VF + + S+N +I G + + A+ +FS+M L P LT S
Sbjct: 371 --------RAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVS 422
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKG-------------FYS------------------N 344
LL +S ++ QIH I+K G YS +
Sbjct: 423 LLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRD 482
Query: 345 VPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ + NA++ Q E +LF+ + S P+ TF ++ + + S+ G Q H
Sbjct: 483 MVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHA 542
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
I+K G D V N L+DMY KCG + R LF DV+ W+S+I YAQ G EE
Sbjct: 543 QIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEE 602
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL +FR M +GV PN+VT VGVL+AC+H GLV+EGL+ + M+ +Y I P E + VV
Sbjct: 603 ALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVV 662
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+L R+G++H A++FI +M + VW+SLL++C GNV++G+ A E L DP +S
Sbjct: 663 NLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSG 722
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ NIYAS G W + +L M GV K PG SWIE+ ++H
Sbjct: 723 PSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVH 768
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 256/517 (49%), Gaps = 72/517 (13%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A + AC+ R++ G++VH + + + ++N+Y K G ++ A +VFD +P
Sbjct: 118 ASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPV 177
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+N V+WTA+I G SQ GQ A+EL+ +M G+ PD+F S + ACS L + GRQ
Sbjct: 178 KNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQT 237
Query: 204 H--AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
H A+ I E + +I NALI +Y K R+ A +F + +++ SW +MI G+ +
Sbjct: 238 HGYAYRIAVETDASVI--NALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQ-- 293
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
SC EAM++F ++ PD S+L +C
Sbjct: 294 ------------------------NSCD--AEAMAMFWQLSQEGWQPDVFACASILNSCG 327
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------- 356
S +++QG Q+H++ IK S+ V N+++ A
Sbjct: 328 SLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNA 387
Query: 357 --------GEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
G+L +FS M KP +TF ++G ++ +++E+ Q+H I+K+G
Sbjct: 388 MIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSG 447
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+LD++ + L+D+Y K + A+ +FN M + D+V W+++I G AQ GEEA+KLF
Sbjct: 448 TSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFN 507
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLAR 524
+++ SG+ PN T V ++T S + + G Q + +I++ G + ++D+ A+
Sbjct: 508 QLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKA--GADSDHHVSNALIDMYAK 565
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
G + E + + D++ W S++++ HG +
Sbjct: 566 CGFIKEGR-LLFESTLGKDVICWNSMISTYAQHGQAE 601
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 228/504 (45%), Gaps = 68/504 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+S + R +L H + + PD L N +L Y K G + DAR +FD MP +N
Sbjct: 17 LLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKN 76
Query: 146 VVSWTAMIAGCSQNGQENAAIELYV--QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+VSW + I+ +Q+G E A+ L+ Q G P++F S +RAC+ V G+Q+
Sbjct: 77 LVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQV 136
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H ++ ++ ALI +Y K I A VF ++ K+ +W ++I G+S++
Sbjct: 137 HGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQI--- 193
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
A+ LF +MG + PD + S + AC++
Sbjct: 194 -------------------------GQGGVALELFGKMGLDGVRPDRFVLASAVSACSAL 228
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFSLM----LASQT--- 371
L G Q H Y + ++ V NA++ + +LF M L S T
Sbjct: 229 GFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMI 288
Query: 372 ------------------------KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+PD ++ +C ++A++ G Q+H + +K L
Sbjct: 289 AGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLE 348
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D +V N L+DMY KC L AR +F + + D +S++++I GY++ G A+ +F +M
Sbjct: 349 SDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKM 408
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
R ++P+ +T V +L S +E Q++ ++ G S ++D+ ++
Sbjct: 409 RYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKS-GTSLDLYAGSSLIDVYSKFSL 467
Query: 528 VHEAEDFINQMAFDDDIVVWKSLL 551
V +A+ N M + D+V+W +++
Sbjct: 468 VEDAKAVFNLM-HNRDMVIWNAMI 490
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 181/424 (42%), Gaps = 64/424 (15%)
Query: 253 MIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS--EMGDRELI 307
++ +SKL AR +F+ M NL SW + I+ A +A++LF+ +
Sbjct: 52 LLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEA 111
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------- 353
P+ + S L AC ++ G Q+H ++ G NV V A++
Sbjct: 112 PNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLV 171
Query: 354 ----------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
Q G LF M +PD + AC+A+ L
Sbjct: 172 FDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFL 231
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E G Q H Y + + D V+N L+D+Y KC L AR+LF+ ME+ ++VSW+++I GY
Sbjct: 232 EGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGY 291
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY------RIMQNE 505
Q C EA+ +F ++ G +P+ +L +C + + +G Q++ + +E
Sbjct: 292 MQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDE 351
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VD 561
Y ++ ++D+ A+ + EA +A +DD + + +++ G+ +D
Sbjct: 352 Y-------VKNSLIDMYAKCEHLTEARAVFEALA-EDDAISYNAMIEGYSRLGDLAGAID 403
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR--KVPGQSWIE 619
V + LK P V L + +S E ++ G + + G G S I+
Sbjct: 404 VFSKMRYCSLKPSPLT---FVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLID 460
Query: 620 IQTK 623
+ +K
Sbjct: 461 VYSK 464
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/669 (32%), Positives = 331/669 (49%), Gaps = 116/669 (17%)
Query: 71 QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC--QPDAVLHNHILNMYGKC 128
+ +++ +I+P DL+ C R L+ + VH +L SK VL NH+ + Y KC
Sbjct: 61 KTDSHLQIQP--LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC 118
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
++ A +FD+M QRN SWT +IAG ++NG E + +M G+ PDQF + I+
Sbjct: 119 SDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGIL 178
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSH-------------------------------LI 217
+ C GL + LG +HA ++ SH ++
Sbjct: 179 QICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVV 238
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK------------------ 259
S NA+I +T D LDA+++F + + +T G +K
Sbjct: 239 SWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYA 298
Query: 260 ------------------------LDFARTVFNE--MESPNLASWNTIIAGVASCSNANE 293
L AR++FN + A WN +I+G +
Sbjct: 299 LELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEK 358
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN-VPVCNAIL 352
A+ LF++M ++ D T S+ A + L G ++H+ IK G N V + NA+
Sbjct: 359 ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVA 418
Query: 353 QHQA--GEL----------------------------------FRLFSLMLASQTKPDHI 376
A G L +FS M A P+
Sbjct: 419 NAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQF 478
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
TF+ V+ +CA + LE G Q+H I K GL +D + + L+DMY KCG LG A+++FN +
Sbjct: 479 TFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRI 538
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ D VSW+++I G+AQ G ++AL+LFRRM GV PN VT + VL ACSH GLVEEGL
Sbjct: 539 SNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGL 598
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
Q +++M+ YG++P E +C+VDLL+R G +++A +FI++M + + +VW++LL +C+
Sbjct: 599 QYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRV 658
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
HGNV++G+ AA+ IL NSA VLL N Y SG +++ L MKE+GV+K PG S
Sbjct: 659 HGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCS 718
Query: 617 WIEIQTKIH 625
WI + +H
Sbjct: 719 WISVNGTLH 727
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 287/527 (54%), Gaps = 65/527 (12%)
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MPQRN+VSWTAMI+G SQN + + AI + M G +P QF F S IRAC+ L + +G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H +K GS L + L MY+K G+M D
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSK---------------------CGAMFD----- 94
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A VF EM + SW +I G + EA+ F +M D E+ D + S L AC
Sbjct: 95 --ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 152
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL------------------- 359
+ + G +HS ++K GF S++ V NA+ + +AG++
Sbjct: 153 GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSY 212
Query: 360 ----------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+F + +P+ TF+ ++ ACA A+LE GTQLH +MK
Sbjct: 213 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 272
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
D FV + L+DMY KCG L A + F+ + DP ++W+SL+ + Q G G++A+K+
Sbjct: 273 INFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKI 332
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM GV+PN +T + +LT CSH GLVEEGL + M YG++P E SCV+DLL
Sbjct: 333 FERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLG 392
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAGR+ EA++FIN+M F+ + W S L +C+ HG+ ++GK AAE ++K++P NS ALVL
Sbjct: 393 RAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVL 452
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
L NIYA+ +WE+V + M++ V+K+PG SW+++ K H G +
Sbjct: 453 LSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 499
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 196/443 (44%), Gaps = 78/443 (17%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRI---RPSTYA--DLISACSSLRSLQLGRKVHD 104
+ S L + + ++EA+ F RI P+ +A I AC+SL S+++G+++H
Sbjct: 12 MISGLSQNSKFSEAIRTF------CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 65
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
L + + +++ +MY KCG++ DA VF+EMP ++ VSWTAMI G S+ G+
Sbjct: 66 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 125
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A+ + +M+ + DQ S + AC L GR +H+ V+K S + NAL
Sbjct: 126 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 185
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY+K + A NVF ID E N+ S+ +I G
Sbjct: 186 MYSKAGDMESASNVFG-------------IDS--------------ECRNVVSYTCLIDG 218
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+ +S+F E+ + + P+ T SL+ AC + +L QG Q+H+ ++K F +
Sbjct: 219 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 278
Query: 345 VPVCNAIL------------------------------------QHQAG-ELFRLFSLML 367
P ++IL QH G + ++F M+
Sbjct: 279 -PFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMV 337
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSL 426
KP+ ITF ++ C+ +E G + KT G+ + ++D+ + G L
Sbjct: 338 DRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRL 397
Query: 427 GSARELFNFME-DPDVVSWSSLI 448
A+E N M +P+ W S +
Sbjct: 398 KEAKEFINRMPFEPNAFGWCSFL 420
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/565 (35%), Positives = 315/565 (55%), Gaps = 36/565 (6%)
Query: 67 FDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYG 126
F N +F Y+ LI C ++S+ K+ H L L N +++ Y
Sbjct: 65 FATAHNGASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYL 122
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
KCGS+ AR VFDE+P R++V+W +MIA +NG+ AI++Y +M+ G++PD+FTF S
Sbjct: 123 KCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSS 182
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHG-SHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
+ +A S L V G++ H + G S++ +AL+ MY KF ++ DA V + K
Sbjct: 183 VFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGK 242
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
D+ + ++I G+S E++ +F M +
Sbjct: 243 DVVLFTALIVGYSH----------------------------HGEDGESLQVFRNMTKKG 274
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRL 362
+ + T+ S+L C + L G IH I+K G S V V ++Q+ E+ L
Sbjct: 275 IEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVTWTSVIVGLVQNGREEIALL 334
Query: 363 -FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F ML S P+ T + V+ AC+++A LE G Q+H +MK GL +D +V L+D Y
Sbjct: 335 KFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYG 394
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCGS AR +FN + + DVVS +S+I YAQ G G EAL+LF M+ +G+ PN+VT +G
Sbjct: 395 KCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLG 454
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL+AC++ GL+EEG ++ +N I T++ +C+VDLL RAGR+ EAE INQ+
Sbjct: 455 VLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI- 513
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D+V+W++LL++C+ HG+V++ KR ++ + P + VLL N+YAS+G W +V +
Sbjct: 514 SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMK 573
Query: 602 GSMKERGVRKVPGQSWIEIQTKIHA 626
+M+E ++K P SW++++ +IH
Sbjct: 574 SAMREMRLKKNPAMSWVDVEREIHT 598
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/566 (34%), Positives = 316/566 (55%), Gaps = 26/566 (4%)
Query: 78 IRPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I+P+ + +++AC+ R++ GR+VH ++ + D N +++MY K G ++ A
Sbjct: 105 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 164
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
++F++MP +VVSW A+I+GC NG ++ AIEL +QM SGL+P+ F SI++AC+G
Sbjct: 165 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 224
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
LGRQ+H +IK+ S L+ MY K + DA VF ++ +D+ W ++I
Sbjct: 225 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 284
Query: 256 GFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS-------LFSEMGDRE 305
G S + D A ++F + L T +A V + + EA S L ++G
Sbjct: 285 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIG--- 341
Query: 306 LIPDGLTVRSLL-----CACTS-PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
I D V L+ C+C S + +++ I + + C+ H G +
Sbjct: 342 FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCD----HGEGAI 397
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+LF ML +PD + ++ ACA++++ E G Q+H +++K D F N L+
Sbjct: 398 -KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 456
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KCGS+ A F+ + + VVSWS++I G AQ G G+ AL+LF RM G+ PNH+T+
Sbjct: 457 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITM 516
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
VL AC+H GLV+E + + M+ +GI T E SC++DLL RAG++ +A + +N M
Sbjct: 517 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 576
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
F + VW +LL + + H + ++GK AAE + ++P S VLL N YASSG W EVA+
Sbjct: 577 FQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAK 636
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
+ MK+ ++K P SW+E++ K+H
Sbjct: 637 VRKLMKDSNIKKEPAMSWVEVKDKVH 662
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 252/553 (45%), Gaps = 78/553 (14%)
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM-PQRNVVSWTAMIAG 155
QLG +VH +++ D + N ++ MYG G ++DAR VFDE +RN VSW +++
Sbjct: 24 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 83
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+N Q AI+++ +M+ SG+ P +F F ++ AC+G + GRQ+HA V++ +
Sbjct: 84 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ + NAL+ MY K R+ A +F + D+ SW ++I G V N
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG--------CVLN------- 188
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
+ + A+ L +M L+P+ + S+L AC + G QIH +
Sbjct: 189 -------------GHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 235
Query: 336 IIK---------------------------KGF----YSNVPVCNAILQ-----HQAGEL 359
+IK K F + ++ + NA++ + E
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
F +F + + T V+ + A++ + Q+H K G D V+NGL+D
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KC L A +F D+++ +S+I +Q GE A+KLF M G+ P+ L
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 415
Query: 480 VGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+L AC+ + E+G Q++ +++ ++ + + +V A+ G + +AE + +
Sbjct: 416 SSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAFSSL 473
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK-----IDPTNSAALVLLCNIYASSGK 593
+ +V W +++ HG+ GKRA E + I+P + +LC +G
Sbjct: 474 P-ERGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMTSVLCAC-NHAGL 528
Query: 594 WEEVARLMGSMKE 606
+E R SMKE
Sbjct: 529 VDEAKRYFNSMKE 541
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 320/580 (55%), Gaps = 63/580 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +++ + L L+LG+++H ++ S + N ++NMY K GS+ AR VF +M
Sbjct: 937 TFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQM 996
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ +++SW MI+GC+ +G E ++ ++V +L+ L+PDQFT S++RACS L
Sbjct: 997 NEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL------- 1049
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
E G +L +Q AM K +LD+ F S A D+ S K++
Sbjct: 1050 ---------EGGYYLATQIHACAM--KAGVVLDS---FVSTALIDVYS------KRGKME 1089
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A +F + +LASWN I+ G + +A+ L+ M + D +T+ + A
Sbjct: 1090 EAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAG 1149
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAGEL---FRLFS------------ 364
+ L QG QIH+ ++K+GF ++ V + +L + GE+ R+FS
Sbjct: 1150 GLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTT 1209
Query: 365 -------------------LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
M S+ +PD TF ++ AC+ + +LE G Q+H I+K
Sbjct: 1210 MISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLN 1269
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
A D FVM L+DMY KCG++ AR LF + SW+++IVG AQ G +EAL+ F+
Sbjct: 1270 CAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFK 1329
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M+S GV P+ VT +GVL+ACSH GLV E + + MQ YGI P E SC+VD L+RA
Sbjct: 1330 YMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRA 1389
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
GR+ EAE I+ M F+ ++++LL +C+ + + GKR AE +L ++P++SAA VLL
Sbjct: 1390 GRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLS 1449
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+YA++ +WE VA M++ V+K PG SW++++ K+H
Sbjct: 1450 NVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVH 1489
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 210/453 (46%), Gaps = 69/453 (15%)
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V+ W ++ Q G+ A++ +V M+ S + D TF ++ +GL C+ LG+Q+H
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
V++S + N LI MY K S++R AR
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKA----------GSVSR------------------AR 990
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS-P 323
+VF +M +L SWNT+I+G ++ +F + L+PD TV S+L AC+S
Sbjct: 991 SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLE 1050
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF--------------- 360
Y QIH+ +K G + V A++ +A LF
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIM 1110
Query: 361 -------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
RL+ LM S + D IT + A + L+ G Q+H ++K G
Sbjct: 1111 HGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN 1170
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
LD+FV +G++DMY+KCG + SAR +F+ + PD V+W+++I G + G E AL + +M
Sbjct: 1171 LDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQM 1230
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAG 526
R S V+P+ T ++ ACS + +E+G Q++ I++ P + +VD+ A+ G
Sbjct: 1231 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPF--VMTSLVDMYAKCG 1288
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ +A + I W +++ HGN
Sbjct: 1289 NIEDARGLFKRTN-TRRIASWNAMIVGLAQHGN 1320
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 223/472 (47%), Gaps = 49/472 (10%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP--QRNVVSWTAMI 153
L LG++ H IL+S PD + N+++ MY KCGSL AR +FD P R++V+W A++
Sbjct: 672 LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731
Query: 154 AGCSQNG-QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ + + + + L+ + +S + + T + + C LH + +K
Sbjct: 732 SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
+ AL+ +Y KF I +A +F +A +D+ W M+ +
Sbjct: 792 QWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAY--------------- 836
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
V +C EAM LFSE PD +T+R+L ++ + Q
Sbjct: 837 ------------VDTCLEY-EAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQF 883
Query: 333 HSYIIKKGFY----SNVPVCNAILQH--QAGELFRL---FSLMLASQTKPDHITFNDVMG 383
+Y K Y S+V V N L Q GE + F M+ S+ D +TF ++
Sbjct: 884 KAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLT 943
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
A + LE+G Q+H +M++GL V V N L++MYVK GS+ AR +F M + D++S
Sbjct: 944 VVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLIS 1003
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+++I G G E ++ +F + + P+ T+ VL ACS +E G L +
Sbjct: 1004 WNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSS---LEGGYYLATQIH 1060
Query: 504 N---EYGIIPTRERRSCVVDLLARAGRVHEAED-FINQMAFDDDIVVWKSLL 551
+ G++ + ++D+ ++ G++ EAE F+NQ F D+ W +++
Sbjct: 1061 ACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGF--DLASWNAIM 1110
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP--DVVSW 444
A + L +G + H I+ +G D FV N L+ MY KCGSL SAR+LF+ D D+V+W
Sbjct: 668 AASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTW 727
Query: 445 SSLIVGYAQFG-CGEEALKLFRRMRSSGVRPNHVTLVGVLTAC--SHVGLVEEGLQLYRI 501
++++ A + LFR +R S V TL V C S E L Y +
Sbjct: 728 NAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAV 787
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ G+ +V++ A+ G + EA + MA D+V+W ++ +
Sbjct: 788 ---KIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAV-RDVVLWNVMMKA 835
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 298/517 (57%), Gaps = 45/517 (8%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
P+ V +L + + G + +AR +FD+MP RNVV+W AMIA QN + AI L+++M
Sbjct: 231 PNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM 290
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
+ + ++ ++I + + RQL + ++ +Q A+I+ Y + R+
Sbjct: 291 PEK----NSISWTTVINGYVRMGKLDEARQL----LNQMPYRNVAAQTAMISGYVQNKRM 342
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCS 289
DA +F+ I+ +D+ W +MI G+S ++D A +F +M ++ SWNT++A A
Sbjct: 343 DDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVG 402
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+ A+ +F EM ++ ++ + SL+ T Q SY+
Sbjct: 403 QMDAAIKIFEEMKEKNIV----SWNSLISGLT---------QNGSYL------------- 436
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
+ + F LM KPD TF + +CA +A+L++G QLH +MK+G A D
Sbjct: 437 --------DALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATD 488
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
+FV N L+ MY KCGS+ SA LF ++ DVVSW+SLI YA G G EALKLF +M
Sbjct: 489 LFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEV 548
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
GV P+ VT VG+L+ACSHVGL+++GL+L++ M Y I P E +C+VDLL RAGR+
Sbjct: 549 EGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLE 608
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
EA + M + + +W +LL +C+ HGN+++ K AAE +L+ +P ++ VLL N+ A
Sbjct: 609 EAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQA 668
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+G+W+EVAR+ MKE+G K PG SWIE+Q ++HA
Sbjct: 669 EAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHA 705
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 233/529 (44%), Gaps = 73/529 (13%)
Query: 92 SLRSLQLGR--------KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
+L+ QLG+ KV H+ + V HN +++ + K G + DAR +FD MPQ
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHM----THKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-----LMPDQFT-----------FGSI 187
RN+VSW +MIA N + A +L+ +M LM +T F +
Sbjct: 75 RNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLL 134
Query: 188 IRACSGLCCVGL------GRQLHA--HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+ +CC + RQ + + L+S N+++ YT+ + F
Sbjct: 135 PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFF 194
Query: 240 SSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+A +D+ SW M+DGF + L+ + F ++ +PN SW T++ G A EA
Sbjct: 195 EEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARR 254
Query: 297 LFSEMGDRELIPDGLTVRSLL--CACTSPLSLYQGMQ----------IHSYII------K 338
LF +M R ++ + + + C +SL+ M I+ Y+
Sbjct: 255 LFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEA 314
Query: 339 KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL----EMG 394
+ + +P N Q + M ++ + I+ DV+ +A M
Sbjct: 315 RQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMD 374
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
LH + K + D+ N ++ Y + G + +A ++F M++ ++VSW+SLI G Q
Sbjct: 375 EALHLF--KQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQN 432
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G +ALK F M G +P+ T L++C+H+ ++ G QL++++ G
Sbjct: 433 GSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKS-GYATDLFV 491
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDD----DIVVWKSLLASCKTHGN 559
+ ++ + A+ G + AE + F D D+V W SL+A+ +GN
Sbjct: 492 SNALITMYAKCGSISSAE-----LLFKDIDHFDVVSWNSLIAAYALNGN 535
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
H+ + D V N ++ Y + G ++ A +F+EM ++N+VSW ++I+G +QNG
Sbjct: 378 HLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLD 437
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A++ ++ M G PDQ TF + +C+ L + +G+QLH V+KS + + L NALI
Sbjct: 438 ALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALIT 497
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY K I A +F I D+ S WN++IA
Sbjct: 498 MYAKCGSISSAELLFKDIDHFDVVS----------------------------WNSLIAA 529
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
A N EA+ LF +M + PD +T +L AC+ + QG+++ +++ Y+
Sbjct: 530 YALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQA--YNI 587
Query: 345 VPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
P+ C L +AG L F L+ + + + ++GAC +LE+
Sbjct: 588 EPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELA 642
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 187/438 (42%), Gaps = 67/438 (15%)
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVF 267
EHGS++ N I K +I +A VF + K+ + SMI F+K + AR +F
Sbjct: 10 EHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLF 69
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC-TSPLSL 326
+ M N+ SWN++IA EA LF +M R+L +L+ C T L
Sbjct: 70 DGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYS-----WTLMITCYTRNGEL 124
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDV 381
+ + + + K N CNA++ Q E RLF M A D +++N +
Sbjct: 125 AKARNLFNLLPYKW---NPVCCNAMVAGYAKNRQFDEARRLFDAMPAK----DLVSWNSM 177
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ + +G Q + + DV N ++D +V+ G L S+ E F + +P+
Sbjct: 178 LTGYTRNGEMRLGLQFFEEMAER----DVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 233
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
VSW +++ G+A+FG EA +LF +M V + + + C V+E + L+
Sbjct: 234 VSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCH----VDEAISLFME 289
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF-------------------DD 542
M + I T V++ R G++ EA +NQM + DD
Sbjct: 290 MPEKNSISWT-----TVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDD 344
Query: 543 -----------DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
D+V W +++A G +D + ++K D + +V YA
Sbjct: 345 ARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVA---SYAQV 401
Query: 592 GKWEEVARLMGSMKERGV 609
G+ + ++ MKE+ +
Sbjct: 402 GQMDAAIKIFEEMKEKNI 419
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 127/234 (54%), Gaps = 12/234 (5%)
Query: 30 QAGEVVDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPST 82
Q G++ D+ ++ F+++ W+ L S L + Y +AL +F L + + ST
Sbjct: 400 QVGQM-DAAIKIFEEMKEKNIVSWN-SLISGLTQNGSYLDALKSF-MLMGHEGQKPDQST 456
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+A +S+C+ L +LQ+G+++H ++ S D + N ++ MY KCGS+ A ++F ++
Sbjct: 457 FACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDID 516
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+VVSW ++IA + NG A++L+ +M G+ PD+ TF I+ ACS + + G +
Sbjct: 517 HFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLK 576
Query: 203 LHAHVIKSEHGSHLISQNA-LIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
L ++++ + L A ++ + + R+ +A+ + + + WG+++
Sbjct: 577 LFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALL 630
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/566 (34%), Positives = 316/566 (55%), Gaps = 26/566 (4%)
Query: 78 IRPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I+P+ + +++AC+ R++ GR+VH ++ + D N +++MY K G ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
++F++MP +VVSW A+I+GC NG ++ AIEL +QM SGL+P+ F SI++AC+G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
LGRQ+H +IK+ S L+ MY K + DA VF ++ +D+ W ++I
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377
Query: 256 GFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS-------LFSEMGDRE 305
G S + D A ++F + L T +A V + + EA S L ++G
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIG--- 434
Query: 306 LIPDGLTVRSLL-----CACTS-PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
I D V L+ C+C S + +++ I + + C+ H G +
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCD----HGEGAI 490
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+LF ML +PD + ++ ACA++++ E G Q+H +++K D F N L+
Sbjct: 491 -KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 549
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KCGS+ A F+ + + VVSWS++I G AQ G G+ AL+LF RM G+ PNH+T+
Sbjct: 550 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITM 609
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
VL AC+H GLV+E + + M+ +GI T E SC++DLL RAG++ +A + +N M
Sbjct: 610 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 669
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
F + VW +LL + + H + ++GK AAE + ++P S VLL N YASSG W EVA+
Sbjct: 670 FQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAK 729
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
+ MK+ ++K P SW+E++ K+H
Sbjct: 730 VRKLMKDSNIKKEPAMSWVEVKDKVH 755
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 140/599 (23%), Positives = 251/599 (41%), Gaps = 104/599 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + ++ ++ ++L G +H ++L S A L NH+++ Y KC AR VFDE+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P VSW++++ S NG +AI+ + M G+ ++F +++ LG
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD---AQLGA 120
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+HA + + GS + NAL+AMY GF +D
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYG----------------------------GFGFMD 152
Query: 262 FARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
AR VF+E S N SWN +++ +A+ +F EM + P ++ AC
Sbjct: 153 DARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNAC 212
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
T ++ G Q+H+ +++ G+ +V NA++
Sbjct: 213 TGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWN 272
Query: 357 ---------GELFRLFSLMLASQTK---PDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
G R L+L ++ P+ + ++ ACA + ++G Q+H +++K
Sbjct: 273 ALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKA 332
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
D ++ GL+DMY K L A ++F++M D++ W++LI G + G +EA +F
Sbjct: 333 NADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIF 392
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---------EYGIIPTRERR 515
+R G+ N TL VL + + + Q++ + + G+I + +
Sbjct: 393 YGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKC 452
Query: 516 SCVVDLL-----ARAGRVHEAEDFINQMA-------------------FDDDIVVWKSLL 551
SC+ D + +G + I ++ + D V SLL
Sbjct: 453 SCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLL 512
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSA-ALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+C + + GK+ +++K + A A L YA G E+ S+ ERGV
Sbjct: 513 NACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV 571
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/619 (32%), Positives = 328/619 (52%), Gaps = 70/619 (11%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPST--YADLISACSSLRSLQLGRKV 102
+W+ + + K +N AL F ++N+ ++P++ + L+S C++ ++ G ++
Sbjct: 245 LWNV-MLNGYVKNGDFNSALGTFQEMRNSC---VKPNSVSFVCLLSVCATRGIVRAGIQL 300
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H ++ S + D + N I+ MY KCG+L DAR +FD MPQ + V+W +IAG QNG
Sbjct: 301 HGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFT 360
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
+ A+ L+ M+ SG+ D TF S + + + +++H+++++ + ++AL
Sbjct: 361 DEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSAL 420
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
+ +Y K + A F D+ +MI G+ V N +
Sbjct: 421 VDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGY--------VLNGLNV---------- 462
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-- 340
EA++LF + ++P+ LT+ S+L AC + SL G ++H I+KKG
Sbjct: 463 ----------EALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLE 512
Query: 341 ------------------------FYSNVPVCNAIL---------QHQAGEL-FRLFSLM 366
F+ +PV +++ Q+ EL LF M
Sbjct: 513 NVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQM 572
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
S TK D ++ + + ACA +L G +LHC++++ D FV + L+DMY KCG L
Sbjct: 573 GTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKL 632
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
AR +F+ M+ + VSW+S+I Y G E L LF M +G++P+HVT + +++AC
Sbjct: 633 ALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSAC 692
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
H GLV+EG+ +R M EYGI E +C+VDL RAGR+HEA D I M F D
Sbjct: 693 GHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGT 752
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W SLL +C+ HGNV++ K A+++++++DP NS VLL N++A +G+WE V ++ MKE
Sbjct: 753 WGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKE 812
Query: 607 RGVRKVPGQSWIEIQTKIH 625
+GV+K+PG SWI++ H
Sbjct: 813 KGVQKIPGYSWIDVNGGTH 831
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 144/529 (27%), Positives = 243/529 (45%), Gaps = 68/529 (12%)
Query: 67 FDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYG 126
F F +N T+ +I AC L ++ L + VH+ S D + + ++ +Y
Sbjct: 164 FFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYT 223
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
G + DA+ +FDE+P R+ + W M+ G +NG N+A+ + +M S + P+ +F
Sbjct: 224 DNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVC 283
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++ C+ V G QLH VI+S S N +I MY+K + DA +F + + D
Sbjct: 284 LLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTD 343
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
+W +I G+ + F +EA++LF M +
Sbjct: 344 TVTWNGLIAGYVQNGF----------------------------TDEAVALFKAMVTSGV 375
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-------------------------- 340
D +T S L + SL ++HSYI++ G
Sbjct: 376 KLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACK 435
Query: 341 -FYSN----VPVCNA-----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
F N V VC A +L E LF ++ P+ +T V+ ACAA+AS
Sbjct: 436 TFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALAS 495
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L++G +LHC I+K GL V + + MY K G L A + F M D V W+ +IV
Sbjct: 496 LKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVS 555
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGII 509
++Q G E A+ LFR+M +SG + + V+L L+AC++ + G +L+ +++N + I
Sbjct: 556 FSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSF--I 613
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S ++D+ ++ G++ A + M + ++ V W S++A+ HG
Sbjct: 614 SDTFVASTLIDMYSKCGKLALARSVFDMMDWKNE-VSWNSIIAAYGNHG 661
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 149/580 (25%), Positives = 253/580 (43%), Gaps = 88/580 (15%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
L K L+ E+L A Q + FR P++ A L+ Q R++H +L
Sbjct: 62 LSKSRLFEESLAA----QLESMFRAFPNSDASLVK--------QQVRQIHAKVLVCGMNG 109
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
L + +L MY C S +D +F + + W +I G S G + A+ + +ML
Sbjct: 110 SLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRML 169
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH--LISQNALIAMYTKFDR 231
S + PD++TF +I+AC GL V L + +H + G H L ++LI +YT
Sbjct: 170 GSNVAPDKYTFPYVIKACGGLNNVPLCKMVHE--LARSMGFHMDLFIGSSLIKLYTDNGY 227
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
I DA +F + +D W M++G+ K +
Sbjct: 228 IHDAKYLFDELPVRDCILWNVMLNGYVK----------------------------NGDF 259
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
N A+ F EM + + P+ ++ LL C + + G+Q+H +I+ GF S+ V N I
Sbjct: 260 NSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTI 319
Query: 352 LQ--HQAGELF----------------------------------RLFSLMLASQTKPDH 375
+ + G LF LF M+ S K D
Sbjct: 320 ITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDS 379
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
ITF + + SL+ ++H YI++ G+ DV++ + L+D+Y K G + A + F
Sbjct: 380 ITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ 439
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
DV +++I GY G EAL LFR + G+ PN +T+ VL AC+ + ++ G
Sbjct: 440 NTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLG 499
Query: 496 LQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
+L+ I++ G+ + S + + A++GR+ A F +M D V W ++ S
Sbjct: 500 KELHCDILKK--GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDS-VCWNLMIVSF 556
Query: 555 KTHGN----VDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
+G +D+ ++ + K D + +A + C Y +
Sbjct: 557 SQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPA 596
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 208/648 (32%), Positives = 337/648 (52%), Gaps = 85/648 (13%)
Query: 32 GEVVDSFLRRFDDI---WDF-------DLFS------SLCKQNLYNEALVAFDFLQNNTN 75
G + S RF D+ W+ DLFS K ++EAL + +
Sbjct: 72 GNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG- 130
Query: 76 FRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
IRP T+ ++ +C+ L GR+VH H++ D + N ++ MY KCG +
Sbjct: 131 --IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVS 188
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
ARM+FD+MP R+ +SW AMI+G +N + +EL+ +M + + PD T S+I AC
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACEL 248
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L LG QLH++V+++ + ++ N+LI MY + W
Sbjct: 249 LGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLS------------------VGHWKE- 289
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
A +VF+ ME ++ SW TII+G ++A+ + M +PD +T+
Sbjct: 290 ---------AESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTI 340
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---- 361
S+L AC S L GM++H + G V V N+++ +A E+F
Sbjct: 341 ASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPD 400
Query: 362 -----------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+F + ++KP+ +T + ACA + +L G ++H
Sbjct: 401 KDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIH 460
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+ +K G+ D F+ N ++D+YV+CG + +A FN + + DV +W+ L+ GYAQ G G
Sbjct: 461 AHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGA 519
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
++LF+RM S + P+ VT + +L ACS G+V EGL+ ++ M+ Y I P + +CV
Sbjct: 520 MVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACV 579
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VDLL RAG+++EA +FI +M D +W +LL +C+ H +V +G+ AA++I K D +
Sbjct: 580 VDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESI 639
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+LLCN+YA SGKW+EVA++ +MKE G+ PG SW+E++ K+HA
Sbjct: 640 GYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHA 687
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 309/587 (52%), Gaps = 68/587 (11%)
Query: 79 RPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP+ + +++AC+ R L+ GR+VH ++ + + D N +++MY K G +E A
Sbjct: 202 RPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAAT 261
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF++MP +VVSW A I+GC +G ++ A+EL +QM SGL+P+ FT S+++AC+G
Sbjct: 262 VFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGA 321
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
LGRQ+H ++K+ L+ MY K G
Sbjct: 322 FNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH--------------------------G 355
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD--GLTVR 314
F LD AR VF+ M +L WN +I+G + E +SLF M L D T+
Sbjct: 356 F--LDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLA 413
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAGEL------------- 359
S+L + S ++ Q+H+ K G S+ V N ++ + G+L
Sbjct: 414 SVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSD 473
Query: 360 ---------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+LF ML +PD + ++ AC ++++ E G Q+H
Sbjct: 474 DIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVH 533
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+++K DVF N L+ Y KCGS+ A F+ + + +VSWS++I G AQ G G+
Sbjct: 534 AHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGK 593
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
AL LF RM GV PNH+TL VL+AC+H GLV++ + + M+ +GI T E +C+
Sbjct: 594 RALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACM 653
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
+D+L RAG++ +A + +N M F + VW +LL + + H + ++G+ AAE + ++P S
Sbjct: 654 IDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKS 713
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N YAS+G W+E+A++ MK+ V+K P SW+EI+ K+H
Sbjct: 714 GTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVH 760
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 155/622 (24%), Positives = 279/622 (44%), Gaps = 99/622 (15%)
Query: 42 FDDIWD------FDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD+I D L ++ + +AL+AF ++ R P L
Sbjct: 60 FDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRG----RGVPCNEFALPVVLKCAPD 115
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM----PQRNVVSWTA 151
++ G +VH ++++ D + N ++ +YG G +++AR +FDE +RN VSW
Sbjct: 116 VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
MI+ +N Q AI ++ +M+ SG P++F F ++ AC+G + GRQ+H V+++
Sbjct: 176 MISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG 235
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEME 271
+ + + NAL+ MY+K I A VF + D+
Sbjct: 236 YEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVV----------------------- 272
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
SWN I+G + + + A+ L +M L+P+ T+ S+L AC + G Q
Sbjct: 273 -----SWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQ 327
Query: 332 IHSYII-------------------KKGFYSN-------VPVCNAILQH----------Q 355
IH +++ K GF + +P + IL + +
Sbjct: 328 IHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGR 387
Query: 356 AGELFRLFSLMLASQTKPD--HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
GE+ LF M D T V+ + A+ ++ Q+H K GL D V+
Sbjct: 388 HGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVI 447
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
NGL+D Y KCG L A ++F D++S ++++ +Q GE+A+KLF +M G+
Sbjct: 448 NGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLE 507
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
P+ L +L AC+ + E+G Q++ +++ ++ + +V A+ G + +A+
Sbjct: 508 PDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQF--TSDVFAGNALVYAYAKCGSIEDAD 565
Query: 533 DFINQMAF----DDDIVVWKSLLASCKTHGNVDVGKRAAENILK-IDPTNSAALVLLCNI 587
MAF + IV W +++ HG+ GKRA + + +D + + L ++
Sbjct: 566 -----MAFSGLPERGIVSWSAMIGGLAQHGH---GKRALDLFHRMLDEGVAPNHITLTSV 617
Query: 588 YAS---SGKWEEVARLMGSMKE 606
++ +G ++ + SMKE
Sbjct: 618 LSACNHAGLVDDAKKYFESMKE 639
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 159/609 (26%), Positives = 253/609 (41%), Gaps = 115/609 (18%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P T ++ + RSL G +H H+L S A NH+L +Y +C AR VFD
Sbjct: 4 PETIGSALARFGTSRSLFAGAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFD 61
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E+P VSW++++ S NG A+ + M G+ ++F +++ V
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRF 118
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+HA + + + NAL+A+Y GF
Sbjct: 119 GAQVHALAVATRLVHDVFVANALVAVY----------------------------GGFGM 150
Query: 260 LDFARTVFNEM----ESPNLASWNTIIAGVASCSNANEAMSLFSEM---GDRELIPDGLT 312
+D AR +F+E N SWNT+I+ + +A+ +F EM G+R P+
Sbjct: 151 VDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGER---PNEFG 207
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF---- 360
++ ACT L G Q+H +++ G+ +V NA++ A +F
Sbjct: 208 FSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMP 267
Query: 361 ---------------------RLFSLMLASQTK---PDHITFNDVMGACAAMASLEMGTQ 396
R L+L ++ P+ T + V+ ACA + +G Q
Sbjct: 268 AADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQ 327
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H +++K D FV GL+DMY K G L AR++F+FM D++ W++LI G + G
Sbjct: 328 IHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGR 387
Query: 457 GEEALKLFRRMRSSG--VRPNHVTLVGVL--TACSH--------------VGLVEE---- 494
E L LF RMR G + N TL VL TA S +GL+ +
Sbjct: 388 HGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVI 447
Query: 495 -GL--QLYRIMQNEYGIIPTRERRS----CVVDLLARAGRVHEAEDFIN------QMAFD 541
GL ++ Q +Y I +E RS ++ + ED I + +
Sbjct: 448 NGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLE 507
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA-ALVLLCNIYASSGKWEEVARL 600
D V SLL +C + + GK+ +++K T+ A L YA G E+
Sbjct: 508 PDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMA 567
Query: 601 MGSMKERGV 609
+ ERG+
Sbjct: 568 FSGLPERGI 576
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 199/448 (44%), Gaps = 74/448 (16%)
Query: 44 DIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVH 103
D+ ++ F S C + ++ + ++ T + ++ AC+ + LGR++H
Sbjct: 270 DVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIH 329
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
++ + D + +++MY K G L+DAR VFD MP+R+++ W A+I+GCS +G+
Sbjct: 330 GFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHG 389
Query: 164 AAIELYVQMLQSGLMPD--QFTFGSIIRACSGLCCVGLGRQLH--AHVIKSEHGSHLISQ 219
+ L+ +M + GL D + T S++++ + + RQ+H A I SH+I
Sbjct: 390 EVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVI-- 447
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
N LI Y K +LD+A VF E S ++ S
Sbjct: 448 NGLIDSYWK----------------------------CGQLDYAIKVFKESRSDDIISST 479
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
T++ ++ C + +A+ LF +M + L PD + SLL ACTS + QG Q+H+++IK+
Sbjct: 480 TMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKR 539
Query: 340 GFYSNVPVCNAIL-----------------------------------QHQAGE-LFRLF 363
F S+V NA++ QH G+ LF
Sbjct: 540 QFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLF 599
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG--LMDMYV 421
ML P+HIT V+ AC A L + + MK +D + ++D+
Sbjct: 600 HRMLDEGVAPNHITLTSVLSAC-NHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILG 658
Query: 422 KCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G L A EL N M + W +L+
Sbjct: 659 RAGKLEDAMELVNNMPFQANAAVWGALL 686
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 345/683 (50%), Gaps = 123/683 (18%)
Query: 63 ALVAFDFLQNNTNFRIRP---STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
A+ A D + + IRP T++ L+ +C R +LG+ VH ++ +PD+VL+N
Sbjct: 45 AVSALDLMARDG---IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 120 HILNMYGKCGSLEDARMVFDEMP---QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
++++Y K G A VF+ M +R+VVSW+AM+A NG+E AI+++V+ L+ G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-------GSHLIS-----QNALIA 224
L+P+ + + ++IRACS VG+GR ++K+ H G LI +N+
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 225 MYTKFDRILD----AW------------------------------------NVFSSIAR 244
Y FD++ + W +VFS+ A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 245 -------KDITSWG-----------SMIDGFSK------LDFARTVFNEMESPNLASWNT 280
K + SW S++D ++K +D R VF+ ME ++ SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTA 341
Query: 281 IIAG-VASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+I G + +C+ A EA++LFSEM + + P+ T S AC + G Q+ K
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 339 KGFYSNVPVCNAILQ-----------HQAGE-------------------------LFRL 362
+G SN V N+++ +A E F+L
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
S + + TF ++ A + S+ G Q+H ++K GL+ + V N L+ MY K
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ +A +FNFME+ +V+SW+S+I G+A+ G L+ F +M GV+PN VT V +
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSHVGLV EG + + M ++ I P E +C+VDLL RAG + +A +FIN M F
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA 641
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D++VW++ L +C+ H N ++GK AA IL++DP AA + L NIYA +GKWEE +
Sbjct: 642 DVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRR 701
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
MKER + K G SWIE+ KIH
Sbjct: 702 KMKERNLVKEGGCSWIEVGDKIH 724
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 224/532 (42%), Gaps = 86/532 (16%)
Query: 25 CMLLDQAGEVVDSF---LRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNF 76
C L+D + +SF + FD + + ++ + + C Q + + F + F
Sbjct: 206 CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF 265
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC---GSLED 133
T + + SAC+ L +L LG+++H + S D + +++MY KC GS++D
Sbjct: 266 ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDD 323
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIELYVQMLQSG-LMPDQFTFGSIIRAC 191
R VFD M +V+SWTA+I G +N AI L+ +M+ G + P+ FTF S +AC
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
L +G+Q+ K S+ N++I+M+ K DR+ DA F S++ K
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK------ 437
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
NL S+NT + G N +A L SE+ +REL
Sbjct: 438 ----------------------NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL- 362
T SLL + S+ +G QIHS ++K G N PVCNA++ A +F
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 363 ---------------------------FSLMLASQTKPDHITFNDVMGACAAMASLEMG- 394
F+ M+ KP+ +T+ ++ AC+ + + G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQ 453
+ + + ++D+ + G L A E N M DV+ W + + G +
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL-GACR 654
Query: 454 FGCGEEALKLFRR--MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
E KL R + P + + AC+ G EE ++ R M+
Sbjct: 655 VHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA--GKWEESTEMRRKMK 704
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 51 FSSLCKQNL--YNEAL----------VAFDFLQNNTNFRIRPS--TYADLISACSSLRSL 96
F SL ++NL YN L AF L T + S T+A L+S +++ S+
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
+ G ++H ++ + + N +++MY KCGS++ A VF+ M RNV+SWT+MI G
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG-RQLHAHVIKSEHGSH 215
+++G +E + QM++ G+ P++ T+ +I+ ACS + V G R ++ +
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPK 610
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG--------FSKLDFARTV 266
+ ++ + + + DA+ +++ + D+ W + + KL AR +
Sbjct: 611 MEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA-ARKI 669
Query: 267 FNEMESPNLASWNTIIAGVASCSNA-NEAMSLFSEMGDRELIPDG 310
E++ PN + ++ + +C+ E+ + +M +R L+ +G
Sbjct: 670 L-ELD-PNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 302/530 (56%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + + N++ W M G + + +A++LYV M+ GL+P+ +TF ++++C+ L
Sbjct: 19 VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G Q+H HV+K + L +LI+MY + +R+ DA VF + +D+ S+ +++ G
Sbjct: 79 SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ ++ AR +F+E+ ++ SWN +I+G N EA+ LF EM + PD T+
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL------------ 359
+++ A S+ G Q+HS+I GF SN+ + NA++ + GE+
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258
Query: 360 ----------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
LF ML S P+ +T ++ ACA + ++++G +
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318
Query: 398 HCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G+ + L+DMY KCG + +A ++FN M + +W+++I G+A G
Sbjct: 319 HVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHG 378
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
A +F RMR + ++P+ +T VG+L+ACSH G+++ G ++R M + Y I P E
Sbjct: 379 RANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHY 438
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL +G EAE+ I+ M + D V+W SLL +CK HGNV++G++ A+N+ KI+P
Sbjct: 439 GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEP 498
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYA++G+W EVAR+ G + ++G++KVPG S IEI + +H
Sbjct: 499 NNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVH 548
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 193/442 (43%), Gaps = 107/442 (24%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA------- 134
T+ L+ +C+ L++ + G ++H H+L + D +H +++MY + LEDA
Sbjct: 65 TFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRS 124
Query: 135 ------------------------RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
R +FDE+P ++VVSW AMI+G + G A+EL+
Sbjct: 125 SHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFK 184
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M+++ + PD+ T ++I A + + LGRQ+H+ + GS+L NALI Y+K
Sbjct: 185 EMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCG 244
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ A +F ++ KD+ SW +I G++ L+ +
Sbjct: 245 EMETACGLFLGLSYKDVISWNILIGGYTHLNLYK-------------------------- 278
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK--KG-------- 340
EA+ LF EM P+ +T+ S+L AC ++ G IH YI K KG
Sbjct: 279 --EALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 336
Query: 341 -----------------------FYSNVPVCNAI-----LQHQAGELFRLFSLMLASQTK 372
+ ++P NA+ + +A F +FS M ++ K
Sbjct: 337 TSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIK 396
Query: 373 PDHITFNDVMGACAAMASLEMGTQL-----HCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
PD ITF ++ AC+ L++G + H Y + L ++D+ G
Sbjct: 397 PDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEH----YGCMIDLLGHSGLFK 452
Query: 428 SARELFNFME-DPDVVSWSSLI 448
A E+ + M +PD V W SL+
Sbjct: 453 EAEEMISTMTMEPDGVIWCSLL 474
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 174/380 (45%), Gaps = 52/380 (13%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
++S FD+I W+ + S + Y EAL F + TN R ST +I
Sbjct: 145 IESARNMFDEIPVKDVVSWN-AMISGYVETGNYKEALELFKEMMK-TNVRPDESTMVTVI 202
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SA + S++LGR+VH I + + N +++ Y KCG +E A +F + ++V+
Sbjct: 203 SASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVI 262
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +I G + A+ L+ +ML+SG P+ T SI+ AC+ L + +GR +H ++
Sbjct: 263 SWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYI 322
Query: 208 IKSEHGSHLIS--QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
K G S + +LI MY+K I A VF+S+ K + +W +MI GF
Sbjct: 323 DKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGF-------- 374
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
A AN A +FS M E+ PD +T LL AC+
Sbjct: 375 --------------------AMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGM 414
Query: 326 LYQGMQI-----HSYII--KKGFYSNVPVCNAILQHQAGELFRLFSLMLASQT-KPDHIT 377
L G I H+Y I K Y C L +G LF+ M+++ T +PD +
Sbjct: 415 LDLGRHIFRSMTHNYKITPKLEHYG----CMIDLLGHSG-LFKEAEEMISTMTMEPDGVI 469
Query: 378 FNDVMGACAAMASLEMGTQL 397
+ ++ AC ++E+G +
Sbjct: 470 WCSLLKACKMHGNVELGEKF 489
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 143/305 (46%), Gaps = 39/305 (12%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +VF ++ PNL WNT+ G A + A+ L+ M L+P+ T L
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD-H 375
L +C + +G+QIH +++K G+ ++ V + L S+ + ++ D H
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTS-----------LISMYVQNERLEDAH 118
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
F+ DV L+ Y G + SAR +F+
Sbjct: 119 KVFD------------------------RSSHRDVVSYTALVTGYASRGYIESARNMFDE 154
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+ DVVSW+++I GY + G +EAL+LF+ M + VRP+ T+V V++A + G +E G
Sbjct: 155 IPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELG 214
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
Q++ + ++G + + ++D ++ G + A +++ D++ W L+
Sbjct: 215 RQVHSWIA-DHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY-KDVISWNILIGG-Y 271
Query: 556 THGNV 560
TH N+
Sbjct: 272 THLNL 276
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L A +F +++P+++ W+++ G+A ALKL+ M S G+ PN T +L +
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 486 CSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
C+ + +EGLQ++ +++ Y + + ++ + + R+ +A ++ + D+
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYEL--DLYVHTSLISMYVQNERLEDAHKVFDRSS-HRDV 129
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
V + +L+ + G ++ + + I D + A++ + Y +G ++E L M
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMI---SGYVETGNYKEALELFKEM 186
Query: 605 KERGVRKVPGQS 616
+ VR P +S
Sbjct: 187 MKTNVR--PDES 196
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 331/663 (49%), Gaps = 113/663 (17%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N+NF + Y ++ C+ +S++ GR+V I SS D +L ++ MY KCG L+
Sbjct: 145 NSNFDL--GAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLK 202
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+ RMVFD++ + + W MI+ S +G +I L+ QML+ G+ P+ +TF SI++ +
Sbjct: 203 EGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFA 262
Query: 193 GLCCVGLGRQLHAHVIKSEHGSH-------------------------------LISQNA 221
+ V GRQ+H + K S+ +IS N+
Sbjct: 263 AVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNS 322
Query: 222 LIAMYTK----------------------------------------FDRILDAWNVFSS 241
+I+ Y K ++L ++++ ++
Sbjct: 323 MISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAA 382
Query: 242 IARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
+++ +++D +SK L+ A VF M+ + SW ++I G ++ A+ LF
Sbjct: 383 TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLF 442
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-- 356
EM R ++PD V S+L AC +L G +H YI + +N V NA+ A
Sbjct: 443 DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC 502
Query: 357 ----------------------------------GELFRLFSLMLASQTKPDHITFNDVM 382
E LF+ M ++KPD T ++
Sbjct: 503 GSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACIL 561
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
ACA++A+L+ G ++H Y ++ G + D +V N ++DMYVKCG L AR LF+ + + D+V
Sbjct: 562 PACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLV 621
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
SW+ +I GY G G EA+ F +MR +G+ P+ V+ + +L ACSH GL++EG +++ IM
Sbjct: 622 SWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIM 681
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ E I P E +C+VDLLAR G + +A FI M D +W +LL C+ H +V +
Sbjct: 682 KKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKL 741
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
++ AE I +++P N+ VLL NIYA + KWEEV +L + +RG++K PG SWIEI+
Sbjct: 742 AEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKG 801
Query: 623 KIH 625
KI+
Sbjct: 802 KIN 804
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 194/466 (41%), Gaps = 80/466 (17%)
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
++ E L+ + Y F ++ FSS+A S +D +LD +R +
Sbjct: 72 TVRGEKAMQLLESGLKVKEYELFSKL-----SFSSLAYAPALETKSYMD--VELDSSRKI 124
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAM------SLFSEMGDRELIPDGLTVRSLLCAC 320
E +L + ++ CS+ N S+ +R+ I DG VRS++ +
Sbjct: 125 VEFCEVGDLKNAMELL-----CSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESS 179
Query: 321 TSPLSLYQGMQIHSYIIKKG-----------------FYSNVPVCNAILQHQAGELFRLF 363
+ G+++ +K G F N+ + GE LF
Sbjct: 180 GVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLF 239
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
ML KP+ TF+ ++ AA+A +E G Q+H I K G V+N L+ Y
Sbjct: 240 KQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVG 299
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
+ A++LF+ + D DV+SW+S+I GY + G + +++F +M GV + T+V V
Sbjct: 300 RKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVF 359
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPT---RERR--SCVVDLLARAGRVHEAEDFINQM 538
AC+++G + G L+ Y I RE R + ++D+ ++ G ++ A +M
Sbjct: 360 VACANIGTLLLGKVLH-----SYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERM 414
Query: 539 --------------------------AFDD--------DIVVWKSLLASCKTHGNVDVGK 564
FD+ D+ S+L +C +GN+ GK
Sbjct: 415 DEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGK 474
Query: 565 RAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+ I + + TNS L ++YA G ++ + MK++ V
Sbjct: 475 IVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDV 520
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 345/683 (50%), Gaps = 123/683 (18%)
Query: 63 ALVAFDFLQNNTNFRIRP---STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
A+ A D + + IRP T++ L+ +C R +LG+ VH ++ +PD+VL+N
Sbjct: 45 AVSALDLMARDG---IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 120 HILNMYGKCGSLEDARMVFDEMP---QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
++++Y K G A VF+ M +R+VVSW+AM+A NG+E AI+++V+ L+ G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-------GSHLIS-----QNALIA 224
L+P+ + + ++IRACS VG+GR ++K+ H G LI +N+
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 225 MYTKFDRILD----AW------------------------------------NVFSSIAR 244
Y FD++ + W +VFS+ A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 245 -------KDITSWG-----------SMIDGFSK------LDFARTVFNEMESPNLASWNT 280
K + SW S++D ++K +D R VF+ ME ++ SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTA 341
Query: 281 IIAG-VASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+I G + +C+ A EA++LFSEM + + P+ T S AC + G Q+ K
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 339 KGFYSNVPVCNAILQ-----------HQAGE-------------------------LFRL 362
+G SN V N+++ +A E F+L
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
S + + TF ++ A + S+ G Q+H ++K GL+ + V N L+ MY K
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ +A +FNFME+ +V+SW+S+I G+A+ G L+ F +M GV+PN VT V +
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSHVGLV EG + + M ++ I P E +C+VDLL RAG + +A +FIN M F
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA 641
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D++VW++ L +C+ H N ++GK AA IL++DP AA + L NIYA +GKWEE +
Sbjct: 642 DVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRR 701
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
MKER + K G SWIE+ KIH
Sbjct: 702 KMKERNLVKEGGCSWIEVGDKIH 724
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 224/532 (42%), Gaps = 86/532 (16%)
Query: 25 CMLLDQAGEVVDSF---LRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNF 76
C L+D + +SF + FD + + ++ + + C Q + + F + F
Sbjct: 206 CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF 265
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC---GSLED 133
T + + SAC+ L +L LG+++H + S D + +++MY KC GS++D
Sbjct: 266 ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDD 323
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIELYVQMLQSG-LMPDQFTFGSIIRAC 191
R VFD M +V+SWTA+I G +N AI L+ +M+ G + P+ FTF S +AC
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
L +G+Q+ K S+ N++I+M+ K DR+ DA F S++ K
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK------ 437
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
NL S+NT + G N +A L SE+ +REL
Sbjct: 438 ----------------------NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL- 362
T SLL + S+ +G QIHS ++K G N PVCNA++ A +F
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 363 ---------------------------FSLMLASQTKPDHITFNDVMGACAAMASLEMG- 394
F+ M+ KP+ +T+ ++ AC+ + + G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQ 453
+ + + ++D+ + G L A E N M DV+ W + + G +
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL-GACR 654
Query: 454 FGCGEEALKLFRR--MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
E KL R + P + + AC+ G EE ++ R M+
Sbjct: 655 VHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA--GKWEESTEMRRKMK 704
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 166/393 (42%), Gaps = 50/393 (12%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFS-------SLCKQNLYNEALVAFD 68
C D + C A VD + FD + D + S + NL EA+ F
Sbjct: 306 CSLVDMYAKC----SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 69 FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC 128
+ + T++ AC +L ++G++V ++ + N +++M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
+EDA+ F+ + ++N+VS+ + G +N A +L ++ + L FTF S++
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+ + + G Q+H+ V+K + NALI+MY+K I A VF+ + +++
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
SW SMI GF+K FA V + F++M + + P
Sbjct: 542 SWTSMITGFAKHGFAIRV----------------------------LETFNQMIEEGVKP 573
Query: 309 DGLTVRSLLCACTSPLSLYQG-------MQIHSYIIKKGFYSNVPVCNAILQHQAGELFR 361
+ +T ++L AC+ + +G + H K Y+ C L +AG L
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA----CMVDLLCRAGLLTD 629
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
F + + D + + +GAC ++ E+G
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELG 662
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 51 FSSLCKQNL--YNEAL----------VAFDFLQNNTNFRIRPS--TYADLISACSSLRSL 96
F SL ++NL YN L AF L T + S T+A L+S +++ S+
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
+ G ++H ++ + + N +++MY KCGS++ A VF+ M RNV+SWT+MI G
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG-RQLHAHVIKSEHGSH 215
+++G +E + QM++ G+ P++ T+ +I+ ACS + V G R ++ +
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPK 610
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG--------FSKLDFARTV 266
+ ++ + + + DA+ +++ + D+ W + + KL AR +
Sbjct: 611 MEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA-ARKI 669
Query: 267 FNEMESPNLASWNTIIAGVASCSNA-NEAMSLFSEMGDRELIPDG 310
E++ PN + ++ + +C+ E+ + +M +R L+ +G
Sbjct: 670 L-ELD-PNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 210/631 (33%), Positives = 321/631 (50%), Gaps = 68/631 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQN---NTNFRIRPSTYA 84
+ +A + D R D W+ + + ++ L EA F + N N + T A
Sbjct: 92 IKEARFLFDDMPERDDVSWN-SMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLA 150
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ AC L ++G+ VH + + D + + MY KCG L+ A + FD++ +
Sbjct: 151 TVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENK 210
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
++V+W MI G +QN E AIEL+ QM G P+ TF +++A + + +GR H
Sbjct: 211 DIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFH 270
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
A V+K + AL+ MY+KF I D
Sbjct: 271 AKVLKLGCSMDVFVATALVDMYSKFYDIEDV----------------------------E 302
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
F EM NL S+N +I G + EA+ ++S++ + PD T L +C+
Sbjct: 303 RAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSS 362
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------------- 352
++ +G Q+H + +K G S+V V N+I+
Sbjct: 363 TVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIIS 422
Query: 353 ---QHQAGELFRL-FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
Q+ GE + F M K D + + V+ A ++ A++E G LH ++MK+GL
Sbjct: 423 GFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDC 482
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++V + ++DMY KCG + A+++F+ M + +VVSW+S+I GYAQ G +EAL LF+ M
Sbjct: 483 TIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMT 542
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
SSG+ P VT VG+L ACSH GLVEEG Y +M + YGI P+ E +C+VDLL RAG +
Sbjct: 543 SSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYL 602
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EAE F+ +F + +W SLL++C H N DVG RAA++ L ++P S++ L NIY
Sbjct: 603 EEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIY 662
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
AS W EV+R+ MK+ GV K PG SWIE
Sbjct: 663 ASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 215/480 (44%), Gaps = 75/480 (15%)
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M + NVV WT+ I ++ G + A+ ++QML++G+ P+ T+ + I AC+ L
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
LH ++K + L + LI+MY+K DRI +A +F + +D SW SMI G+S+
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
N + + + SC N +L+ T+ ++L AC
Sbjct: 121 GL-----------NEEACGLFCSMINSCEN-------------WKLLVSDFTLATVLKAC 156
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPV--------CNAILQHQAG--------------- 357
G +H Y +K GF S++ V C + AG
Sbjct: 157 GGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWN 216
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E LF M KP+ TF V+ A AM+ +G H ++K
Sbjct: 217 TMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKL 276
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G ++DVFV L+DMY K + F M ++VS+++LI GY+ G EEAL+++
Sbjct: 277 GCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVY 336
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+++S G+ P+ T VG+ ++CS V EG Q++ + ++G+ + +V+ ++
Sbjct: 337 SQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVH-VHSVKFGLDSDVSVGNSIVNFYSK 395
Query: 525 AGRVH---EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK----IDPTN 577
G EA + IN+ + V W +++ +G G++A K ID T+
Sbjct: 396 CGFTDSALEAFESINR----PNSVCWAGIISGFAQNGE---GEKALMQFCKMRKFIDKTD 448
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 206/595 (34%), Positives = 324/595 (54%), Gaps = 51/595 (8%)
Query: 80 PSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T+ +++ A + +RS R+V D I QP+ N++L Y K G L +
Sbjct: 36 PETFLHNNIVHAYALIRSSIYARRVFDGI----PQPNLFSWNNLLLAYSKSGHLSEMERT 91
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ---SGLMPDQFTFGSIIRACSGL 194
F+++P R+ V+W +I G S +G AA++ Y M++ S L + T ++++ S
Sbjct: 92 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLT--RVTLMTMLKLSSSN 149
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
V LG+Q+H VIK S+L+ + L+ MY+K I DA VF + ++ + +++
Sbjct: 150 GHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLM 209
Query: 255 DGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
G ++ A +F ME ++ SW+ +I G+A EA+ F EM L D
Sbjct: 210 GGLLACGMIEDALQLFRGMEKDSV-SWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQY 268
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------ 353
S+L AC ++ G QIH+ II+ ++ V +A++
Sbjct: 269 PFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 328
Query: 354 ------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+AGE ++F M S PDH T + ACA ++SLE G+
Sbjct: 329 KQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGS 388
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q H + GL + V N L+ +Y KCG + + LFN M D VSW++++ YAQFG
Sbjct: 389 QFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFG 448
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EA++LF +M G++P+ VTL GV++ACS GLVE+G + + +M NEYGI+P+
Sbjct: 449 RAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHY 508
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
SC++DL +R+GR+ EA FIN M F D + W +LL++C+ GN+++GK AAE+++++DP
Sbjct: 509 SCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 568
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
+ A LL +IYAS GKW+ VA+L MKE+ VRK PGQSWI+ + K+H+ D
Sbjct: 569 HHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSAD 623
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 216/502 (43%), Gaps = 81/502 (16%)
Query: 40 RRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
R F+ + D D L L A+ A++ + + + + T ++ SS
Sbjct: 90 RTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSN 149
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV------- 146
+ LG+++H ++ + ++ + +L+MY K G + DA+ VF + RN
Sbjct: 150 GHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLM 209
Query: 147 -----------------------VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
VSW+AMI G +QNG E AIE + +M GL DQ+
Sbjct: 210 GGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYP 269
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
FGS++ AC GL + GRQ+HA +I++ H+ +ALI MY K + A VF +
Sbjct: 270 FGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 329
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+K++ SW +M+ G+ + A EA+ +F +M
Sbjct: 330 QKNVVSWTAMVVGYGQ----------------------------TGRAGEAVKIFLDMQR 361
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL-- 359
+ PD T+ + AC + SL +G Q H I G + V N++ L + G++
Sbjct: 362 SGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDD 421
Query: 360 -FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
RLF+ M D +++ ++ A A QL +++ GL D + G++
Sbjct: 422 STRLFNEM----NVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVIS 477
Query: 419 MYVKCGSLGSARELFNFMED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ G + + F M + P +S +I +++ G EEA+ M R
Sbjct: 478 ACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMP---FR 534
Query: 474 PNHVTLVGVLTACSHVGLVEEG 495
P+ + +L+AC + G +E G
Sbjct: 535 PDAIGWTTLLSACRNKGNLEIG 556
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 210/649 (32%), Positives = 342/649 (52%), Gaps = 72/649 (11%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C ++ A +V D+ + +W+ L + QN Y ++ F + F
Sbjct: 372 YAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYV--QNGYANEVMELFFNMKSCGFYPDDF 429
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY+ ++SAC+ L+ L LG ++H I+ +K + + N +++MY K G+LEDAR F+ +
Sbjct: 430 TYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELI 489
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R+ VSW +I G Q E A L+ +M G++PD+ + SI+ AC+ + + G+
Sbjct: 490 RNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGK 549
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +K+ + L S ++LI MY K I A + + + + + S ++I G++++
Sbjct: 550 QVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI- 608
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N +A++LF +M + +T SLL AC
Sbjct: 609 ----------------------------NLEQAVNLFRDMLVEGINSTEITFASLLDACH 640
Query: 322 SPLSLYQGMQIHSYIIKKGF-----YSNVPVC----NAILQHQAGELF------------ 360
L G QIHS I+K G + V + N++ A LF
Sbjct: 641 EQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVW 700
Query: 361 -----------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+L+ M + PD TF + ACA ++S++ GT+ H I
Sbjct: 701 TAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFH 760
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALK 462
TG D + L+DMY KCG + S+ ++F M DV+SW+S+IVG+A+ G E+AL+
Sbjct: 761 TGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALR 820
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+F M+ S V P+ VT +GVLTACSH G V EG ++ +M N YG+ P + +C+VDLL
Sbjct: 821 VFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLL 880
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G + EAE+FIN++ F+ D VW ++L +C+ HG+ G++AAE +++++P NS+ V
Sbjct: 881 GRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYV 940
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI--QTKIHASGN 629
LL NIYA+SG W+EV L M+E+GV+K+PG SWI + +T + +G+
Sbjct: 941 LLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGD 989
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 242/532 (45%), Gaps = 68/532 (12%)
Query: 66 AFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A +F QN I+ ST ++SA +SL +L G VH L + + + +++
Sbjct: 311 AIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVS 370
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY KCG +E A+ VFD + ++NVV W AM+ G QNG N +EL+ M G PD FT
Sbjct: 371 MYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFT 430
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+ SI+ AC+ L + LG QLH+ +IK++ S+L NAL+ MY K + DA F I
Sbjct: 431 YSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIR 490
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+D SWN II G + EA LF M
Sbjct: 491 NRDNV----------------------------SWNVIIVGYVQEEDEVEAFHLFRRMNL 522
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG----FYSNVPV------CNAI-- 351
++PD +++ S+L AC S L QG Q+H +K G YS + C AI
Sbjct: 523 LGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDS 582
Query: 352 -----------------------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAM 388
Q + LF ML ITF ++ AC
Sbjct: 583 AHKILACMPERSVVSMNALIAGYAQINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQ 642
Query: 389 ASLEMGTQLHCYIMKTGLAL-DVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSS 446
L +G Q+H I+K GL L D F+ L+ MY+ A LF+ +P V W++
Sbjct: 643 QKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTA 702
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I G +Q C AL+L++ MRS V P+ T V L AC+ V +++G + + ++ +
Sbjct: 703 MISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHT- 761
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
G S +VD+ A+ G V + +M+ D++ W S++ +G
Sbjct: 762 GFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNG 813
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 248/525 (47%), Gaps = 76/525 (14%)
Query: 102 VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQ 161
+H L VL N I+++Y KC ++ A F ++ +++++W ++++ S+ G
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
+ ++ + + SG+ P++FTF ++ +C+ L V GRQ+H +V+K S + A
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA 200
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---------------------- 259
LI MY K + + DA ++F D SW SMI G+ K
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPD 260
Query: 260 ----------------LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
LD A +F+ M + N+ +WN +I+G A EA+ F M
Sbjct: 261 QVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRK 320
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI------------ 351
+ T+ S+L A S +L G+ +H+ +K+G +SNV V +++
Sbjct: 321 AGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEA 380
Query: 352 -------LQHQ-----------------AGELFRLFSLMLASQTKPDHITFNDVMGACAA 387
L Q A E+ LF M + PD T++ ++ ACA
Sbjct: 381 AKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACAC 440
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ L++G QLH I+K A ++FV N L+DMY K G+L AR+ F + + D VSW+ +
Sbjct: 441 LKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVI 500
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
IVGY Q EA LFRRM G+ P+ V+L +L+AC+ V +E+G Q++ + + G
Sbjct: 501 IVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVH-CLSVKTG 559
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S ++D+ A+ G + A + M + +V +L+A
Sbjct: 560 QETKLYSGSSLIDMYAKCGAIDSAHKILACMP-ERSVVSMNALIA 603
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 243/552 (44%), Gaps = 90/552 (16%)
Query: 35 VDSFLRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
VD R F + D D+ + S+ + + +V + L N+ T+A ++S+
Sbjct: 110 VDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSS 169
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
C+ L ++ GR+VH +++ + + ++ MY KC L DAR +FD + + VSW
Sbjct: 170 CARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSW 229
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
T+MI G + G A++++ +M + G PDQ F ++I A V LGR +A +
Sbjct: 230 TSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA-----YVDLGRLDNASDLF 284
Query: 210 SE-HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM-------IDGFSKLD 261
S ++++ N +I+ + K ++A F ++ + I S S I + LD
Sbjct: 285 SRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD 344
Query: 262 F-----------------------------------ARTVFNEMESPNLASWNTIIAGVA 286
F A+ VF+ + N+ WN ++ G
Sbjct: 345 FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYV 404
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
ANE M LF M PD T S+L AC L G Q+HS IIK F SN+
Sbjct: 405 QNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLF 464
Query: 347 VCNAILQHQAG------------------------------------ELFRLFSLMLASQ 370
V NA++ A E F LF M
Sbjct: 465 VGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLG 524
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
PD ++ ++ ACA++ LE G Q+HC +KTG ++ + L+DMY KCG++ SA
Sbjct: 525 ILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAH 584
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
++ M + VVS ++LI GYAQ E+A+ LFR M G+ +T +L AC
Sbjct: 585 KILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQ 643
Query: 491 LVEEGLQLYRIM 502
+ G Q++ ++
Sbjct: 644 KLNLGRQIHSLI 655
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 313/586 (53%), Gaps = 66/586 (11%)
Query: 78 IRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I P+ ++ +++AC+ L G KVH +++ D N +L+MY K G E A
Sbjct: 184 ISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAI 243
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VF E+P+ ++VSW A+IAGC + + + A++L +M + P FT S ++AC+ +
Sbjct: 244 AVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIG 303
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
V LGRQLH+ ++K + LI MY+K + DA
Sbjct: 304 LVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDA-------------------- 343
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
R VF+ M ++ WN+II+G ++C EAMSLF+ M L + T+ +
Sbjct: 344 --------RMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLST 395
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------- 352
+L + + Q+H+ IK G+ + V N++L
Sbjct: 396 ILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAED 455
Query: 353 ------------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q+ GE +++ M KPD F+ + ACA +++ E G Q+H
Sbjct: 456 LVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHV 515
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+++K GL DVF N L++MY KCGS+ A +FN + +VSWS++I G AQ G G +
Sbjct: 516 HVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRK 575
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL+LF +M +G+ PNH+TLV VL+AC+H GLV E + + +M+ +GI PT+E +C+V
Sbjct: 576 ALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMV 635
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
D+L R GR+ EA + +M F VW +LL + + H N+++G+ AAE +L ++P S
Sbjct: 636 DILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSG 695
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+LL NIYAS+G W+ VA++ SMK V+K PG SWIE++ K++
Sbjct: 696 THILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVY 741
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 254/543 (46%), Gaps = 69/543 (12%)
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
+N+Y KC AR + + + ++VSW+A+I+G QNG+ A+ Y +M G ++
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA------ 235
FTF S+++ CS + LG+Q+H + +E S IS N +L+A
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEF-----SLSTVLNACAGLED 203
Query: 236 ----WNVFSSIAR----KDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAG 284
V + + D S +++D ++K + A VF E+ P++ SWN +IAG
Sbjct: 204 ENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAG 263
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK----- 339
+ A+ L +MG + P T+ S L AC + + G Q+HS ++K
Sbjct: 264 CVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPD 323
Query: 340 --------GFYS------------------NVPVCNAILQHQAG-----ELFRLFSLMLA 368
YS +V V N+I+ + E LF+ M
Sbjct: 324 SFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYK 383
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ + T + ++ + A + Q+H +K+G D +V N L+D Y KC L
Sbjct: 384 EGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLED 443
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A ++F D+V+++S+I Y+Q+G GEEALK++ RM+ ++P+ + AC++
Sbjct: 444 AAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACAN 503
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+ E+G Q++ + + G++ + +V++ A+ G + +A N++++ IV W
Sbjct: 504 LSAYEQGKQIH-VHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISW-RGIVSWS 561
Query: 549 SLLASCKTHGNVDVGKRAAE---NILK--IDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+++ HG+ G++A + +LK I P N LV + + +G E R G
Sbjct: 562 AMIGGLAQHGH---GRKALQLFYQMLKNGILP-NHITLVSVLSACNHAGLVTEARRFFGL 617
Query: 604 MKE 606
M++
Sbjct: 618 MEK 620
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 50/311 (16%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWD----------FDLFSSLCKQNLYNEALVAFDF 69
D + C LL A V D + +W+ +D+ + N+Y E L +F
Sbjct: 332 DMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGL---EF 388
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
Q +T + ++ + + ++ +VH + S Q D + N +L+ YGKC
Sbjct: 389 NQ---------TTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCC 439
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
LEDA VF+ P ++V++T+MI SQ G A+++Y++M + PD F F S+
Sbjct: 440 LLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFN 499
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
AC+ L G+Q+H HV+K S + + N+L+ MY K I DA +F+ I+ + I S
Sbjct: 500 ACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVS 559
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
W +MI G ++ R +A+ LF +M ++P+
Sbjct: 560 WSAMIGGLAQHGHGR----------------------------KALQLFYQMLKNGILPN 591
Query: 310 GLTVRSLLCAC 320
+T+ S+L AC
Sbjct: 592 HITLVSVLSAC 602
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 313/564 (55%), Gaps = 53/564 (9%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A + C +LRS G++VH +++ + D + N +++MY KC E VFDEM
Sbjct: 177 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 236
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS--GLMPDQFTFGSIIRACSGLCCVGL 199
+RN V+W ++I+ +Q G N A+ L+++M +S G+ PDQFTF +++ C+
Sbjct: 237 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQ 296
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GRQ+HAH+I++ ++I + L+ MY++ R
Sbjct: 297 GRQIHAHLIRANITKNIIVETELVHMYSECGR---------------------------- 328
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
L++A+ +FN M N SWN++I G EA+ LF +M + PD ++ S+L +
Sbjct: 329 LNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSS 388
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL-----FSLMLASQT-KP 373
C S +G ++H++I++ N ILQ +++ ++ + QT K
Sbjct: 389 CVSLSDSQKGRELHNFIVR-----NTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKK 443
Query: 374 DHIT--FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM----------NGLMDMYV 421
D T +N ++ A + ++++ + DV M L+DMY
Sbjct: 444 DRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYS 503
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG++ AR +F+ M ++VSW+++I GY++ GC +EAL L+ M G+ PN VT +
Sbjct: 504 KCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLA 563
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+L+ACSH GLVEEGL+++ MQ +Y I E +C+VDLL RAGR+ +A++F+ +M +
Sbjct: 564 ILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIE 623
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
++ W +LL +C+ H ++D+G+ AA+ + ++DP N V++ NIYA++G+W+EV +
Sbjct: 624 PEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIR 683
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
MK +GV+K PG SWIEI ++I
Sbjct: 684 QMMKMKGVKKDPGVSWIEINSEIQ 707
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 136/269 (50%), Gaps = 22/269 (8%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E + +F ML PD+ TF + C A+ S + G Q+H ++ G D FV N L+
Sbjct: 158 EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALI 217
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS--GVRPN 475
DMY KC S ++F+ M + + V+W+S+I AQFG +AL LF RM+ S G++P+
Sbjct: 218 DMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPD 277
Query: 476 HVTLVGVLTACSHVGLVEEGLQLY------RIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
T +LT C++ +G Q++ I +N II E +V + + GR++
Sbjct: 278 QFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN---IIVETE----LVHMYSECGRLN 330
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG----KRAAENILKIDPTNSAALVLLC 585
A++ N+MA + + W S++ + +G K+ N +K D + ++++ C
Sbjct: 331 YAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 389
Query: 586 NIYASSGKWEEVARLM--GSMKERGVRKV 612
+ S K E+ + +M+E G+ +V
Sbjct: 390 VSLSDSQKGRELHNFIVRNTMEEEGILQV 418
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 370 QTKP----DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
TKP + + ++ ++ C S + G +H ++ G D ++M ++ +Y + G
Sbjct: 62 HTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGC 121
Query: 426 LGS---ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
L AR+LF M + ++ +W+++I+ YA+ EA +F RM GV P++ T
Sbjct: 122 LDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASA 181
Query: 483 LTACSHVGLVEEGLQLY 499
L C + + G Q++
Sbjct: 182 LRVCGALRSRDGGKQVH 198
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/593 (34%), Positives = 324/593 (54%), Gaps = 47/593 (7%)
Query: 80 PST--YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T Y +++ A + ++S R+V D I QP+ N++L Y K G + +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRI----PQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCC 196
F+++P R+ V+W +I G S +G AA++ Y M++ + T ++++ S
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V LG+Q+H VIK S+L+ + L+ MY I DA VF + ++ + S++ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 257 F---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ A +F ME ++ SW +I G+A A EA+ F EM + L D
Sbjct: 215 LLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF----- 360
S+L AC ++ +G QIH+ II+ F ++ V +A++ H A +F
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 361 -----------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
++F M S PDH T + ACA ++SLE G+Q
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H + +GL V V N L+ +Y KCG + + LFN M D VSW++++ YAQFG
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E ++LF +M G++P+ VTL GV++ACS GLVE+G + +++M +EYGI+P+ SC
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++DL +R+GR+ EA FIN M F D + W +LL++C+ GN+++GK AAE+++++DP +
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHH 573
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
A LL +IYAS GKW+ VA+L M+E+ V+K PGQSWI+ + K+H+ D
Sbjct: 574 PAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSAD 626
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 163/350 (46%), Gaps = 36/350 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ L + L EA+ F ++ ++ + ++ AC L ++ G+++H I+ +
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
Q + + +++MY KC L A+ VFD M Q+NVVSWTAM+ G Q G+ A++++
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ M +SG+ PD +T G I AC+ + + G Q H I S ++ N+L+ +Y K
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
I D+ +F+ + +D SW +M+ +++ F R V
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ--FGRAV----------------------- 454
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP--- 346
E + LF +M L PDG+T+ ++ AC+ + +G + + + Y VP
Sbjct: 455 ---ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE--YGIVPSIG 509
Query: 347 --VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
C L ++G L + PD I + ++ AC +LE+G
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 200/497 (40%), Gaps = 99/497 (19%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
A+ L+ + + R W+ L L A+ A++ + + + +
Sbjct: 81 AYSKAGLISEMESTFEKLPDRDGVTWNV-LIEGYSLSGLVGAAVKAYNTMMRDFSANLTR 139
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
T ++ SS + LG+++H ++ + ++ + +L MY G + DA+ VF
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 141 MPQRNV------------------------------VSWTAMIAGCSQNGQENAAIELYV 170
+ RN VSW AMI G +QNG AIE +
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M GL DQ+ FGS++ AC GL + G+Q+HA +I++ H+ +ALI MY K
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ A VF + +K++ SW +M+ G+ +
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQ----------------------------TGR 351
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
A EA+ +F +M + PD T+ + AC + SL +G Q H I G V V N+
Sbjct: 352 AEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNS 411
Query: 351 ILQ------------------------------------HQAGELFRLFSLMLASQTKPD 374
++ +A E +LF M+ KPD
Sbjct: 412 LVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSAREL 432
+T V+ AC+ +E G Q + +M + G+ + + ++D++ + G L A
Sbjct: 472 GVTLTGVISACSRAGLVEKG-QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 433 FNFME-DPDVVSWSSLI 448
N M PD + W++L+
Sbjct: 531 INGMPFPPDAIGWTTLL 547
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 202/494 (40%), Gaps = 92/494 (18%)
Query: 196 CVGLG--------RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
C+GLG + +H ++I++ N ++ Y A VF I + ++
Sbjct: 13 CIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL 72
Query: 248 TSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE-MGD 303
SW +++ +SK + + F ++ + +WN +I G + A+ ++ M D
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GE 358
+T+ ++L +S + G QIH +IK GF S + V + +L A +
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA----LDVFVMN 414
++F + T + +N +MG A +E QL + K ++ + N
Sbjct: 193 AKKVFYGLDDRNT----VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 415 GL-----------------MDMY------VKCGSLGS----------------------- 428
GL MD Y CG LG+
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 429 ---------------ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
A+ +F+ M+ +VVSW++++VGY Q G EEA+K+F M+ SG+
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
P+H TL ++AC++V +EEG Q + G+I + +V L + G + ++
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITS-GLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 534 FINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
N+M D V W +++++ G + + + ++ LK D ++ C+
Sbjct: 428 LFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 590 SSGKWEEVARLMGS 603
K + +LM S
Sbjct: 487 LVEKGQRYFKLMTS 500
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 210/643 (32%), Positives = 330/643 (51%), Gaps = 70/643 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C ++ A +V ++ R D +W+ + N + ++ ++ + I
Sbjct: 372 YSKCEKMEAAAKVFEALEERNDVLWNAMIRGY--AHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+S C+ L++G + H I+ K + + N +++MY KCG+LEDAR +F+ M
Sbjct: 430 TFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM 489
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R+ VSW +I G Q+ E+ A +L+++M G++ D S ++AC+ + + G+
Sbjct: 490 CDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGK 549
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +K L + ++LI MY+K I DA
Sbjct: 550 QVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDA-------------------------- 583
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
R VF+ M ++ S N +IAG S +N EA+ LF EM + + P +T +++ AC
Sbjct: 584 --RKVFSSMPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTKGVNPSEITFATIVEACH 640
Query: 322 SPLSLYQGMQIHSYIIKKGF---------------------------YSNVPVCNAIL-- 352
P SL G Q H IIK GF +S + +I+
Sbjct: 641 KPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLW 700
Query: 353 ------QHQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q G E + + M PD TF V+ C+ ++SL G +H I
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVGYAQFGCGEEALK 462
LD N L+DMY KCG + S+ ++F+ M +VVSW+SLI GYA+ G E+ALK
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+F MR S + P+ +T +GVLTACSH G V +G +++ +M +YGI + +C+VDLL
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G + EA+DFI D +W SLL +C+ HG+ G+ AAE +++++P NS+A V
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYV 940
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL NIYAS G+WEE L +M++RGV+KVPG SWI++ + H
Sbjct: 941 LLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRH 983
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 251/549 (45%), Gaps = 75/549 (13%)
Query: 64 LVAFDFLQN--NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
+VA ++ N ++ + ST ++SA + +L LG VH + + + + +
Sbjct: 309 IVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSL 368
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++MY KC +E A VF+ + +RN V W AMI G + NG+ + +EL++ M SG D
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
FTF S++ C+ + +G Q H+ +IK + +L NAL+ MY K + DA +F
Sbjct: 429 FTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEH 488
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+ +D S WNTII G N +EA LF M
Sbjct: 489 MCDRDNVS----------------------------WNTIIGGYVQDENESEAFDLFMRM 520
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------------- 341
++ DG + S L ACT+ LYQG Q+H +K G
Sbjct: 521 NSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGII 580
Query: 342 ------YSNVP-----VCNAIL----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
+S++P NA++ Q+ E LF ML P ITF ++ AC
Sbjct: 581 EDARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTKGVNPSEITFATIVEACH 640
Query: 387 AMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSW 444
SL +GTQ H I+K G + + ++ L+ +Y+ + A LF+ + P +V W
Sbjct: 641 KPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLW 700
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+ ++ G++Q G EEALK ++ MR G P+ T V VL CS + + EG ++ ++ +
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+ + ++D+ A+ G + + ++M ++V W SL+ +G
Sbjct: 761 LAHDLDELTSNT-LIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNG------ 813
Query: 565 RAAENILKI 573
AE+ LKI
Sbjct: 814 -YAEDALKI 821
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 230/518 (44%), Gaps = 76/518 (14%)
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+L++G+ VH L + L N I+++Y KC + A F+ + +++V +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
S GQ + +V + ++ + P++FTF ++ + V GRQ+H +IK
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF----------------- 257
+ AL+ MY K DR+ DA VF I + W + G+
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 258 ---------------------SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
KL AR +F EM SP++ +WN +I+G A+
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIE 313
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
F M + T+ S+L A +L G+ +H+ IK G SN+ V ++++
Sbjct: 314 YFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 353 --------------------------------QHQAGELFRLFSLMLASQTKPDHITFND 380
++ ++ LF M +S D TF
Sbjct: 374 KCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ CA LEMG+Q H I+K L ++FV N L+DMY KCG+L AR++F M D D
Sbjct: 434 LLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRD 493
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
VSW+++I GY Q EA LF RM S G+ + L L AC++V + +G Q++
Sbjct: 494 NVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVH- 552
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ + G+ S ++D+ ++ G + +A + M
Sbjct: 553 CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSM 590
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 218/485 (44%), Gaps = 69/485 (14%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+PD + ++N Y G L+DAR++F EMP +VV+W MI+G + G E AIE ++
Sbjct: 258 RPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLN 317
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M +S + + T GS++ A + + LG +HA IK S++ ++L++MY+K ++
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ A VF ++ + N WN +I G A +
Sbjct: 378 MEAAAKVFEALEER----------------------------NDVLWNAMIRGYAHNGES 409
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA- 350
++ M LF +M D T SLL C L G Q HS IIKK N+ V NA
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNAL 469
Query: 351 ---------------ILQH--------------------QAGELFRLFSLMLASQTKPDH 375
I +H E F LF M + D
Sbjct: 470 VDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDG 529
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+ AC + L G Q+HC +K GL + + L+DMY KCG + AR++F+
Sbjct: 530 ACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSS 589
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M + VVS ++LI GY+Q EEA+ LF+ M + GV P+ +T ++ AC + G
Sbjct: 590 MPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLG 648
Query: 496 LQLY-RIMQNEYGIIPTRERRS-CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
Q + +I++ +G E ++ L + R+ EA ++++ IV+W +++
Sbjct: 649 TQFHGQIIK--WGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSG 706
Query: 554 CKTHG 558
+G
Sbjct: 707 HSQNG 711
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 13/259 (5%)
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
Q G++ R F + + P+ TF+ V+ A ++E G Q+HC ++K GL + +
Sbjct: 140 QPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGG 199
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
L+DMY KC LG A+ +F+ + DP+ V W+ L GY + G EEA+ +F RMR G RP
Sbjct: 200 ALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRP 259
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR---VHEA 531
+H+ V V+ +G +++ L +G +P+ + + V + R +
Sbjct: 260 DHLAFVTVINTYISLGKLKDARLL-------FGEMPSPDVVAWNVMISGHGKRGCEIVAI 312
Query: 532 EDFIN--QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIY 588
E F+N + + S+L++ N+D+G +K+ +N L ++Y
Sbjct: 313 EYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 589 ASSGKWEEVARLMGSMKER 607
+ K E A++ +++ER
Sbjct: 373 SKCEKMEAAAKVFEALEER 391
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+L +G +H + G+ + + N ++D+Y KC + A + FN +E DV +W+S++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLS 133
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
Y+ G + L+ F + + + PN T VL+ + VE G Q++ M I
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSM-----IK 188
Query: 510 PTRERRS----CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
ER S +VD+ A+ R+ +A+ + + D + V W +C G V G
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIV-DPNTVCW-----TCLFSGYVKAGLP 242
Query: 566 AAENIL------KIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
I+ + + A V + N Y S GK ++ L G M
Sbjct: 243 EEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEM 287
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 212/629 (33%), Positives = 325/629 (51%), Gaps = 74/629 (11%)
Query: 42 FDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI--SACSSL 93
FD + + D+FS L + EA F +Q N +TY ++ SA +S
Sbjct: 378 FDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLP-NLTTYLSILNASAIAST 436
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+L+ + VH H + D + N +++MY KCGS++DAR+VFD M R+V+SW AM+
Sbjct: 437 SALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMM 496
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G +QNG + A +++QM Q GL+PD T+ S++ + ++H H +++
Sbjct: 497 GGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLI 556
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
S +A I MY + I D AR +F+++
Sbjct: 557 SDFRVGSAFIHMYIRCGSI----------------------------DDARLLFDKLSVR 588
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ +WN +I G A EA+SLF +M IPD T ++L A +L ++H
Sbjct: 589 HVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVH 648
Query: 334 SYIIKKGFYSNVPVCNAIL-----------------------------------QHQAG- 357
S+ G ++ V NA++ QH G
Sbjct: 649 SHATDAGLV-DLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGH 707
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
+ F F ML PD T+ ++ ACA+ +LE ++H + + GL D+ V N L+
Sbjct: 708 DAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALV 767
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY KCGS+ AR +F+ M + DV SW+ +I G AQ G G EAL F +M+S G +PN
Sbjct: 768 HMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGY 827
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
+ V VLTACSH GLV+EG + + M +YGI PT E +C+VDLL RAG + EAE FI
Sbjct: 828 SYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILN 887
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M + D W +LL +C T+GN+++ + AA+ LK+ P +++ VLL NIYA++GKWE+
Sbjct: 888 MPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQK 947
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ M+ +G+RK PG+SWIE+ +IH+
Sbjct: 948 LLVRSMMQRKGIRKEPGRSWIEVDNRIHS 976
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 164/647 (25%), Positives = 285/647 (44%), Gaps = 120/647 (18%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C L A +V D L++ IW + + +A+ +D ++ +P+ T
Sbjct: 166 CGRLQCARQVFDKLLKKNIYIWT-TMIGGYAEYGHAEDAMRVYDKMRQECG---QPNEIT 221
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y ++ AC +L+ G+K+H HI+ S Q D + ++NMY KCGS+EDA+++FD+M
Sbjct: 222 YLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMV 281
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RNV+SWT MI G + G+ A L++QM + G +P+ +T+ SI+ A + + ++
Sbjct: 282 ERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKE 341
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H+H + + L NAL+ MY K I DA VF + +DI SW MI G ++
Sbjct: 342 VHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGR 401
Query: 263 ARTVFN---EMES----PNLASW------------------------------------- 278
+ F+ +M+ PNL ++
Sbjct: 402 GQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIG 461
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRE-------------------------------LI 307
N +I A C + ++A +F M DR+ L+
Sbjct: 462 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLV 521
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------- 352
PD T SLL S +L ++H + ++ G S+ V +A +
Sbjct: 522 PDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLL 581
Query: 353 --------------------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
Q + G E LF M PD TF +++ A +L
Sbjct: 582 FDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEAL 641
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E ++H + GL +D+ V N L+ Y KCG++ A+++F+ M + +V +W+ +I G
Sbjct: 642 EWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGL 700
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
AQ GCG +A F +M G+ P+ T V +L+AC+ G +E +++ + G++
Sbjct: 701 AQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSA-GLVSD 759
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +V + A+ G + +A + M + D+ W ++ HG
Sbjct: 760 LRVGNALVHMYAKCGSIDDARSVFDDMV-ERDVFSWTVMIGGLAQHG 805
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 239/512 (46%), Gaps = 74/512 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+Y +++ C + L ++VH I+ S + + + N +L +Y +CG L+ AR VFD++
Sbjct: 120 SYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKL 179
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC---VG 198
++N+ WT MI G ++ G A+ +Y +M Q P++ T+ SI++AC CC +
Sbjct: 180 LKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKAC---CCPVNLK 236
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+++HAH+I+S S + + AL+ MY K I DA +F + +++ SW M
Sbjct: 237 WGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVM----- 291
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
I G+A EA LF +M IP+ T S+L
Sbjct: 292 -----------------------IGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILN 328
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------- 352
A S +L ++HS+ + G ++ V NA++
Sbjct: 329 ANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFS 388
Query: 353 ---------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGAC--AAMASLEMGTQLHCY 400
QH G E F LF M + P+ T+ ++ A A+ ++LE +H +
Sbjct: 389 WTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKH 448
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ G D+ + N L+ MY KCGS+ AR +F+ M D DV+SW++++ G AQ GCG EA
Sbjct: 449 AEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEA 508
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
+F +M+ G+ P+ T + +L +E ++++ E G+I S +
Sbjct: 509 FTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHK-HAVETGLISDFRVGSAFIH 567
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ R G + +A ++++ + W +++
Sbjct: 568 MYIRCGSIDDARLLFDKLSV-RHVTTWNAMIG 598
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 216/479 (45%), Gaps = 75/479 (15%)
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
+Q G+ D F++ +I++ C + L +Q+H +IKS +L N L+ +Y + R+
Sbjct: 110 VQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRL 169
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
A VF + +K+I W +MI G+ A +A
Sbjct: 170 QCARQVFDKLLKKNIYIWTTMIGGY----------------------------AEYGHAE 201
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV----- 347
+AM ++ +M P+ +T S+L AC P++L G +IH++II+ GF S+V V
Sbjct: 202 DAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALV 261
Query: 348 -----CNAI------------------------LQH--QAGELFRLFSLMLASQTKPDHI 376
C +I L H + E F LF M P+
Sbjct: 262 NMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSY 321
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T+ ++ A A+ +LE ++H + + GLALD+ V N L+ MY K GS+ AR +F+ M
Sbjct: 322 TYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM 381
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE-EG 495
+ D+ SW+ +I G AQ G G+EA LF +M+ +G PN T + +L A + E
Sbjct: 382 TERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEW 441
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+++ E G I + ++ + A+ G + +A + M D D++ W +++
Sbjct: 442 VKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMC-DRDVISWNAMMGGLA 500
Query: 556 THGNVDVGKRAAENILKID-----PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+G G A L++ P ++ L LL N + S+ E V + E G+
Sbjct: 501 QNG---CGHEAFTVFLQMQQEGLVPDSTTYLSLL-NTHGSTDALEWVNEVHKHAVETGL 555
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 214/635 (33%), Positives = 328/635 (51%), Gaps = 61/635 (9%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
A ++D RR ++ L SS + L AL F + R+ TYA ++A
Sbjct: 54 HAARLIDEMPRRNAVSYNL-LISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAA 112
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
CS L+ G+ VH + L N + +MY CG + +AR VFD + + VSW
Sbjct: 113 CSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSW 172
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG--LGRQLHAHV 207
++++G + G ++++ M GL + F GSII+ C+ VG + +H V
Sbjct: 173 NSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCV 232
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+K+ + L +A+I MY K + +A +F S+ ++ + +MI GF + + A V
Sbjct: 233 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAA--VG 290
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
E+ + EA+SL+SEM R + P T S+L AC
Sbjct: 291 KEV--------------------SREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFG 330
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAI--LQHQAG---------------------------- 357
G QIH ++K F+ + + +A+ L +G
Sbjct: 331 FGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCV 390
Query: 358 --ELF----RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
ELF RLF + KPD T + VM ACA++A G Q+ C +K G
Sbjct: 391 QNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTA 450
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
+ N + M + G + + F ME DVVSWS++I +AQ GC +AL++F M ++
Sbjct: 451 MGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAK 510
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
V PN VT + VLTACSH GLV++GL+ Y IM+NEYG+ PT + +CVVDLL RAGR+ +A
Sbjct: 511 VAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADA 570
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
E FI AF DD VVW+SLLASC+ HG+++ G+ A+ I+ ++PT+SA+ V+L N+Y +
Sbjct: 571 EAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDA 630
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
G+ ++ MKERGV+K PG SWIE+++ +H+
Sbjct: 631 GELSLASKTRDLMKERGVKKEPGLSWIELRSGVHS 665
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 172/414 (41%), Gaps = 78/414 (18%)
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++R+C+ L V +HAH+ ++ + L +N+L+A Y +
Sbjct: 8 LLRSCTALPHVA---AVHAHIARAHPTASLFLRNSLLAAYCRL----------------- 47
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE- 305
G A + +EM N S+N +I+ + A+ F+
Sbjct: 48 ---------GVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAG 98
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-------- 357
L D T + L AC+ L L G +H+ + G + V + N++ A
Sbjct: 99 LRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEAR 158
Query: 358 ----------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
E ++FSLM + ++ CA+ +
Sbjct: 159 RVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGS 218
Query: 390 SL--EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ + +H ++K GL D+F+ + ++DMY K G+L +A LF + DP+V+ ++++
Sbjct: 219 DVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAM 278
Query: 448 IVGY----AQFG--CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-R 500
I G+ A G EAL L+ M+S G++P+ T +L AC+ G G Q++ +
Sbjct: 279 IAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQ 338
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
++++ + S ++DL + +G + + + DIV W S+++ C
Sbjct: 339 VLKHSFH--DDDYIGSALIDLYSDSGCMEDGYRCFRSLP-KQDIVTWTSMISGC 389
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/587 (33%), Positives = 313/587 (53%), Gaps = 68/587 (11%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I+P+ + + +++AC+ R+++ GR+VH ++ D N +++MY K G ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
++F++MP +VVSW A+I+GC NG ++ AIEL +QM SGL+P+ FT SI++ACSG
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
LGRQ+H +IK+ S L+ MY K N F
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK--------NHF---------------- 353
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
LD AR VF+ M +L N +I+G + +EA+SLF E+ L + T+ +
Sbjct: 354 ----LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAA 409
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------- 353
+L + S + Q+H+ +K GF + V N ++
Sbjct: 410 VLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGD 469
Query: 354 ---------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
H G + +LF ML +PD + ++ ACA++++ E G Q+H
Sbjct: 470 IIACTSMITALSQCDHGEGAI-KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 528
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+++K D F N L+ Y KCGS+ A F+ + + VVSWS++I G AQ G G+
Sbjct: 529 AHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGK 588
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
AL+LF RM G+ PNH+T+ VL AC+H GLV+E + + M+ +GI T E SC+
Sbjct: 589 RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCM 648
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
+DLL RAG++ +A + +N M F + +W +LL + + H + ++GK AAE + ++P S
Sbjct: 649 IDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKS 708
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N YAS+G W EVA++ MK+ ++K P SWIE++ K+H
Sbjct: 709 GTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVH 755
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 252/606 (41%), Gaps = 118/606 (19%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + ++ ++ ++L G +H +L S A NH+++ Y KC AR FDE+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG--- 198
P VSW++++ S NG +AI+ + M G+ ++F +++ CV
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK------CVPDAR 117
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG Q+HA + + GS + NAL+AMY GF
Sbjct: 118 LGAQVHAMAMATGFGSDVFVANALVAMYG----------------------------GFG 149
Query: 259 KLDFARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+D AR VFNE +S N SWN +++ +A+ +F EM + P ++
Sbjct: 150 FMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVV 209
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------------- 356
ACT ++ G Q+H+ +++ G+ +V NA++
Sbjct: 210 NACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVV 269
Query: 357 ------------GELFRLFSLMLA---SQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
G R L+L S P+ T + ++ AC+ + ++G Q+H ++
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K D ++ GL+DMY K L AR++F++M D++ ++LI G + G +EAL
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---------EYGIIPTR 512
LF +R G+ N TL VL + + + Q++ + G+I +
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 513 ERRSCVVDLLARAGRVHE---AEDFIN-------------------------QMAFDDDI 544
+ SC+ D A RV E + D I + + D
Sbjct: 450 WKCSCLSD----ANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA-ALVLLCNIYASSGKWEEVARLMGS 603
V SLL +C + + GK+ +++K + A A L YA G E+ S
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 604 MKERGV 609
+ ERGV
Sbjct: 566 LPERGV 571
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 304/552 (55%), Gaps = 8/552 (1%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + ++ C++ +L+ G+ VH + C+ D + +++MY KCG DA VF +
Sbjct: 332 TLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRI 391
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+VVSW+A+I Q GQ A E++ +M SG++P+QFT S++ A + L + G
Sbjct: 392 EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGE 451
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---S 258
+HA V K NAL+ MY K + D VF + +D+ SW +++ GF
Sbjct: 452 SIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNE 511
Query: 259 KLDFARTVFNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
D +FN+M + PN+ ++ +I+ +S S+ + + +++ L +
Sbjct: 512 TCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGT 571
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKP 373
+L+ L I + +IK+ ++ + Q GE + F M KP
Sbjct: 572 ALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKP 631
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+ T + C+ +A+L+ G QLH +K G + D+FV + L+DMY KCG + A +F
Sbjct: 632 NEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 691
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ + D VSW+++I GY+Q G G +ALK F M G P+ VT +GVL+ACSH+GL+E
Sbjct: 692 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE 751
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
EG + + + YGI PT E +C+VD+L RAG+ HE E FI +M ++++W+++L +
Sbjct: 752 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 811
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
CK HGN++ G+RAA + +++P + +LL N++A+ G W++V + M RGV+K P
Sbjct: 812 CKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEP 871
Query: 614 GQSWIEIQTKIH 625
G SW+E+ ++H
Sbjct: 872 GCSWVEVNGQVH 883
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 241/526 (45%), Gaps = 66/526 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TYA + ACS L+ G++VH + D + + ++++Y KCG + A VF M
Sbjct: 231 TYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCM 290
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P++N VSW A++ G +Q G + L+ +M S + +FT ++++ C+ + G+
Sbjct: 291 PKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQ 350
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H+ I+ L+ MY+K DA VF I D+ SW ++I +
Sbjct: 351 IVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKG 410
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+R EA +F M +IP+ T+ SL+ A T
Sbjct: 411 QSR----------------------------EAAEVFKRMRHSGVIPNQFTLASLVSAAT 442
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL-------------------- 359
LY G IH+ + K GF + VCNA+ + + G +
Sbjct: 443 DLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNA 502
Query: 360 --------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
R+F+ MLA P+ TF ++ +C++++ +++G Q+H I+K
Sbjct: 503 LLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNS 562
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L + FV L+DMY K L A +FN + D+ +W+ ++ GYAQ G GE+A+K F
Sbjct: 563 LDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFI 622
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ GV+PN TL L+ CS + ++ G QL+ M + G S +VD+ A+
Sbjct: 623 QMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHS-MAIKAGQSGDMFVASALVDMYAKC 681
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
G V +AE + + D V W +++ HG +A E +L
Sbjct: 682 GCVEDAEVVFDGLV-SRDTVSWNTIICGYSQHGQGGKALKAFEAML 726
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 244/532 (45%), Gaps = 71/532 (13%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R Y+ ++ C+S L G+ +H ++ S PD+ L N ++N+Y KCGS A VF
Sbjct: 127 RLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 186
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
E+P+R+VVSWTA+I G G + A+ L+ +M + G+ ++FT+ + ++ACS +
Sbjct: 187 GEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLE 246
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+Q+HA IK S L +AL+ +Y K ++ A VF + +++ SW ++++GF+
Sbjct: 247 FGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFA 306
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++ A V N LF M E+ T+ ++L
Sbjct: 307 QMGDAEKVLN----------------------------LFCRMTGSEINFSKFTLSTVLK 338
Query: 319 ACTSPLSLYQGMQIHSYIIKKG-------------FYSNVPVCNAIL------------- 352
C + +L G +HS I+ G YS + L
Sbjct: 339 GCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVS 398
Query: 353 ----------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+ Q+ E +F M S P+ T ++ A + L G +H +
Sbjct: 399 WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVC 458
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K G D V N L+ MY+K GS+ +F + D++SW++L+ G+ + L+
Sbjct: 459 KYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLR 518
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDL 521
+F +M + G PN T + +L +CS + V+ G Q++ +I++N + + +VD+
Sbjct: 519 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNS--LDGNDFVGTALVDM 576
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
A+ + +AE N++ D+ W ++A G G++A + +++
Sbjct: 577 YAKNRFLEDAETIFNRL-IKRDLFAWTVIVAGYAQDGQ---GEKAVKCFIQM 624
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 199/445 (44%), Gaps = 77/445 (17%)
Query: 238 VFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
V S D W S+++ ++K ++A VF E+ ++ SW +I G + + A
Sbjct: 154 VIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGA 213
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--L 352
++LF EM + + T + L AC+ L L G Q+H+ IK G +S++ V +A+ L
Sbjct: 214 VNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDL 273
Query: 353 QHQAGEL----------------------------------FRLFSLMLASQTKPDHITF 378
+ GE+ LF M S+ T
Sbjct: 274 YAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTL 333
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ V+ CA +L G +H ++ G LD F+ L+DMY KCG G A ++F +ED
Sbjct: 334 STVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIED 393
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
PDVVSWS++I Q G EA ++F+RMR SGV PN TL +++A + +G + G +
Sbjct: 394 PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAG------RVHEA---EDFI-------------- 535
+ + +YG + +V + + G RV EA D I
Sbjct: 454 HACV-CKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNET 512
Query: 536 --------NQM---AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALV 582
NQM F+ ++ + S+L SC + +VD+GK+ I+K +D +
Sbjct: 513 CDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTA 572
Query: 583 LLCNIYASSGKWEEVARLMGSMKER 607
L+ ++YA + E+ + + +R
Sbjct: 573 LV-DMYAKNRFLEDAETIFNRLIKR 596
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/645 (31%), Positives = 341/645 (52%), Gaps = 64/645 (9%)
Query: 37 SFLRRFDDI------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
S LRRF W+ L S N+ L +F L ++ ++ T+ + AC
Sbjct: 80 SLLRRFPPSDAGVYHWN-SLIRSYGNNGRANKCLSSF-CLMHSLSWTPDNYTFPFVFKAC 137
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
+ S++ G H + + + N ++ MY +CGSL DAR VFDEMP +VVSW
Sbjct: 138 GEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWN 197
Query: 151 AMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
++I ++ G+ A+E++ +M G PD T +++ C+ + LG+Q H +
Sbjct: 198 SIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVT 257
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTV 266
SE ++ N L+ MY KF + +A VFS++ KD+ SW +M+ G+S++ + A +
Sbjct: 258 SEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRL 317
Query: 267 FNEMESP----NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
F +M+ ++ +W+ I+G A EA+ + +M + P+ +T+ S+L C S
Sbjct: 318 FEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 323 PLSLYQGMQIHSYIIK-------KGFYSNVPVCNAIL----------------------- 352
+L G +IH Y IK G V N ++
Sbjct: 378 VGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKE 437
Query: 353 --------------QH-QAGELFRLFSLMLAS--QTKPDHITFNDVMGACAAMASLEMGT 395
QH A + L S M QT+P+ T + + ACA++A+L +G
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGK 497
Query: 396 QLHCYIMKTGL-ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
Q+H Y ++ A+ +FV N L+DMY KCG +G AR +F+ M + + V+W+SL+ GY
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMH 557
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G GEEAL +F MR G + + VTL+ VL ACSH G++++G++ + M+ ++G+ P E
Sbjct: 558 GYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEH 617
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+C+VDLL RAGR++ A I +M + VVW +LL+ C+ HG V++G+ AA+ I ++
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELA 677
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
N + LL N+YA++G+W++V R+ M+ +G++K PG SW+E
Sbjct: 678 SNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVE 722
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 221/536 (41%), Gaps = 103/536 (19%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDF----DLFSSLCKQNLYNEALVAFDFLQNNTNFR 77
+ C L A +V D +WD + S K AL F + N FR
Sbjct: 172 YSRCGSLSDARKVFDEM-----PVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFR 226
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
T +++ C+S+ + LG++ H ++S+ + + N +++MY K G +++A V
Sbjct: 227 PDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTV 286
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV--------------------------- 170
F MP ++VVSW AM+AG SQ G+ A+ L+
Sbjct: 287 FSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 171 --------QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI-------KSEHGSH 215
QML SG+ P++ T S++ C+ + + G+++H + I K+ HG
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDE 406
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARK--DITSWGSMIDGFSKLDFARTVFNEMESP 273
+ N LI MY K ++ A +F S++ K D+ +W MI G+S+
Sbjct: 407 NMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQH------------- 453
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
+AN+A+ L SEM D + P+ T+ L AC S +L G Q
Sbjct: 454 ---------------GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQ 498
Query: 332 IHSYIIKKGFYSNVP--VCNAILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMGA 384
IH+Y ++ + VP V N ++ A G+ +F M+ + + +T+ +M
Sbjct: 499 IHAYALRNQ-QNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMM----EKNEVTWTSLMTG 553
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-----DP 439
E + + + G LD + ++ G + E FN M+ P
Sbjct: 554 YGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSP 613
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
++ L+ + G AL+L M + P V V +L+ C G VE G
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMP---MEPPPVVWVALLSCCRIHGKVELG 666
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFD-LFSSLCKQNLYNEAL-VAFDFLQNNTNFR 77
D + C +D A + DS + D+ + + + N+AL + + + + R
Sbjct: 415 DMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV---LHNHILNMYGKCGSLEDA 134
T + + AC+SL +L +G+++H + L + Q +AV + N +++MY KCG + DA
Sbjct: 475 PNAFTISCALVACASLAALSIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAKCGDIGDA 532
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
R+VFD M ++N V+WT+++ G +G A+ ++ +M + G D T ++ ACS
Sbjct: 533 RLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACS 590
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD--VVSWSSLIVGYAQF 454
+H ++ G+ L + + + L+ Y+ G L A L D V W+SLI Y
Sbjct: 47 IHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNN 105
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G + L F M S P++ T V AC + V G + + G +
Sbjct: 106 GRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSH-ALSRVTGFMSNVFV 164
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ +V + +R G + +A ++M D+V W S++ S
Sbjct: 165 GNALVAMYSRCGSLSDARKVFDEMPV-WDVVSWNSIIES 202
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/587 (33%), Positives = 313/587 (53%), Gaps = 68/587 (11%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I+P+ + + +++AC+ R+++ GR+VH ++ D N +++MY K G ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
++F++MP +VVSW A+I+GC NG ++ AIEL +QM SGL+P+ FT SI++ACSG
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
LGRQ+H +IK+ S L+ MY K N F
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK--------NHF---------------- 353
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
LD AR VF+ M +L N +I+G + +EA+SLF E+ L + T+ +
Sbjct: 354 ----LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAA 409
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------- 353
+L + S + Q+H+ +K GF + V N ++
Sbjct: 410 VLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGD 469
Query: 354 ---------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
H G + +LF ML +PD + ++ ACA++++ E G Q+H
Sbjct: 470 IIACTSMITALSQCDHGEGAI-KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 528
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+++K D F N L+ Y KCGS+ A F+ + + VVSWS++I G AQ G G+
Sbjct: 529 AHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGK 588
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
AL+LF RM G+ PNH+T+ VL AC+H GLV+E + + M+ +GI T E SC+
Sbjct: 589 RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCM 648
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
+DLL RAG++ +A + +N M F + +W +LL + + H + ++GK AAE + ++P S
Sbjct: 649 IDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKS 708
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N YAS+G W EVA++ MK+ ++K P SWIE++ K+H
Sbjct: 709 GTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVH 755
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 149/606 (24%), Positives = 253/606 (41%), Gaps = 118/606 (19%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + ++ ++ ++L G +H +L S A NH+++ Y KC AR VFDE+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG--- 198
P VSW++++ S NG +AI+ + M G+ ++F +++ CV
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK------CVPDAR 117
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG Q+HA + + GS + NAL+AMY GF
Sbjct: 118 LGAQVHAMAMATGFGSDVFVANALVAMYG----------------------------GFG 149
Query: 259 KLDFARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+D AR VFNE +S N SWN +++ +A+ +F EM + P ++
Sbjct: 150 FMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVV 209
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------------- 356
ACT ++ G Q+H+ +++ G+ +V NA++
Sbjct: 210 NACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVV 269
Query: 357 ------------GELFRLFSLMLA---SQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
G R L+L S P+ T + ++ AC+ + ++G Q+H ++
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K D ++ GL+DMY K L AR++F++M D++ ++LI G + G +EAL
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---------EYGIIPTR 512
LF +R G+ N TL VL + + + Q++ + G+I +
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 513 ERRSCVVDLLARAGRVHE---AEDFIN-------------------------QMAFDDDI 544
+ SC+ D A RV E + D I + + D
Sbjct: 450 WKCSCLSD----ANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA-ALVLLCNIYASSGKWEEVARLMGS 603
V SLL +C + + GK+ +++K + A A L YA G E+ S
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 604 MKERGV 609
+ ERGV
Sbjct: 566 LPERGV 571
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 325/607 (53%), Gaps = 96/607 (15%)
Query: 53 SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHI-LSSKC 111
LCK+N NEA+ + + L R+ T A L+ C+ R+L+ G++VH H+ L+
Sbjct: 33 KLCKKNKLNEAVSSLENLARR-GLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLK 91
Query: 112 QPDAVLHNHILNMYGKCGS-------------------------------LEDARMVFDE 140
+P L NH++NMY KCG ++ AR +FD+
Sbjct: 92 RPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDK 151
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+++VVSW M+ +Q G + A+ Y + Q G+ + F+F ++ C L VGL
Sbjct: 152 MPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLT 211
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
RQ+H ++ + S+++ ++++ Y K G M D
Sbjct: 212 RQVHGQILVAGFLSNVVLSSSVLDAYVKC---------------------GLMGD----- 245
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
AR +F+EM + ++ +W T+++G A + A LF EM ++ + +
Sbjct: 246 --ARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPV-----------SW 292
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
T+ +S Y + G + H+A ELF + M+ +PD TF+
Sbjct: 293 TALISGYA---------RNG-----------MGHKALELF---TKMMLFHVRPDQFTFSS 329
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP- 439
+ ACA++ASL+ G Q+H Y+++ + V++ L+DMY KCGSLG R++F+ M +
Sbjct: 330 CLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKL 389
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
DVV W+++I AQ GCGEEA+++ M SG +P+ +T V +L ACSH GLV++GL +
Sbjct: 390 DVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFF 449
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M +YGI+P++E +C++DLL RAG E D + +M + D VW +LL C+ HG+
Sbjct: 450 ESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGH 509
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+++G++AAE +++++P +S A VLL +IYA G+WE V ++ M ER V+K SW+E
Sbjct: 510 IELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLE 569
Query: 620 IQTKIHA 626
I+ K+H+
Sbjct: 570 IENKVHS 576
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 332/641 (51%), Gaps = 73/641 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L +A V D W+ L + L K ++ ++ F + + + + T++
Sbjct: 142 CGDLKEASRVFDQVKIEKALFWNI-LMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFS 199
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ + SSLRS+ G ++H +IL S + N ++ Y K ++ AR VFDEM +R
Sbjct: 200 CVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTER 259
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V+SW ++I G NG + ++VQML SG+ D T S+ C+ + LGR +H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LD 261
+K A +++ DR + +++D +SK LD
Sbjct: 320 CFGVK--------------ACFSREDRFCN-----------------TLLDMYSKCGDLD 348
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A+ VF EM ++ S+ ++IAG A A EA+ LF EM + + PD TV ++L C
Sbjct: 349 SAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------- 356
L +G ++H +I + ++ V NA++ A
Sbjct: 409 RNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNT 468
Query: 357 -----------GELFRLFSLMLASQT-KPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E LF+L+L + PD T V+ ACA++++ + G ++H YIM+
Sbjct: 469 VIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G D V N L+DMY KCG+L AR LF+ + D+VSW+ +I GY G G+EA+ LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+MR +G+ P+ ++ V +L ACSH GLV+EG + + IM++E I PT E +C+VD+LAR
Sbjct: 589 NQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
G + +A FI M D +W +LL C+ H +V + +R AE + +++P N+ VL+
Sbjct: 649 TGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLM 708
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA + KWEEV RL + +RG+RK PG SWIEI+ +++
Sbjct: 709 ANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 303/530 (57%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + + N++ W M G + + +A+ LYV M+ GL+P+ +TF ++++C+
Sbjct: 44 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 103
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K + L +LI+MY + R+ DA VF + +D+ S+ ++I G
Sbjct: 104 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 163
Query: 257 FSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ + A+ +F+E+ ++ SWN +I+G A N EA+ LF EM + PD T+
Sbjct: 164 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 223
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGE------LFR---- 361
S++ AC S+ G Q+HS+I GF SN+ + NA+ L + GE LF
Sbjct: 224 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 283
Query: 362 ------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
LF ML S P+ +T ++ ACA + ++E+G +
Sbjct: 284 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWI 343
Query: 398 HCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G+A L+DMY KCG + +A+++F+ + + + SW+++I G+A G
Sbjct: 344 HVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHG 403
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
A +F RMR + + P+ +T VG+L+ACSH G+++ G ++R M+ +Y I P E
Sbjct: 404 RANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHY 463
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL +G EAE+ IN M + D V+W SLL +CK HGNV++G+ A+N++KI+P
Sbjct: 464 GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEP 523
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYA++G+W EVA++ + ++G++KVPG S IEI + +H
Sbjct: 524 KNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 573
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 194/410 (47%), Gaps = 43/410 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ L+ +C+ ++ + G+++H H+L D +H +++MY + G LEDAR VFD
Sbjct: 90 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 149
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G ++ G A+EL+
Sbjct: 150 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 209
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M+++ + PD+ T S++ AC+ + LGRQ+H+ + GS+L NALI +Y K
Sbjct: 210 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 269
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIA 283
+ A +F ++ KD+ SW ++I G++ ++ A +F EM ESPN + +I+
Sbjct: 270 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 329
Query: 284 GVASCSNANEAMSLFSEMGDR-ELIPDGLTVR-SLLCACTSPLSLYQGMQIHSYIIKKGF 341
A + + R + + + + R SL+ + Q+ I+ +
Sbjct: 330 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 389
Query: 342 YS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
S N + + +A F +FS M ++ +PD ITF ++ AC+ L++G +
Sbjct: 390 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRS 449
Query: 401 IMKTGLALDVFVMNGLM-DMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + G M D+ G A E+ N ME +PD V W SL+
Sbjct: 450 MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 499
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 40/342 (11%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
EAL F + TN R ST ++SAC+ S++LGR+VH I + + N
Sbjct: 202 KEALELFKEMMK-TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNA 260
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++++Y KCG +E A +F+ + ++V+SW +I G + A+ L+ +ML+SG P+
Sbjct: 261 LIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPN 320
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS--QNALIAMYTKFDRILDAWNV 238
T SI+ AC+ L + +GR +H ++ K G S + +LI MY K I A V
Sbjct: 321 DVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQV 380
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F SI + ++SW +MI GF A AN A +F
Sbjct: 381 FDSILNRSLSSWNAMIFGF----------------------------AMHGRANAAFDIF 412
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQ 353
S M E+ PD +T LL AC+ L G I + K Y P C L
Sbjct: 413 SRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM--KEDYKITPKLEHYGCMIDLL 470
Query: 354 HQAGELFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMG 394
+G LF+ M+ + + +PD + + ++ AC ++E+G
Sbjct: 471 GHSG-LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELG 511
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 41/306 (13%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +VF ++ PNL WNT+ G A S+ A+ L+ M L+P+ T L
Sbjct: 35 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFL 94
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAGELFRLFSLMLASQTKPD 374
L +C + +G QIH +++K G+ ++ V +++ Q G L + S +
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR-- 152
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
DV L+ Y G + SA+++F+
Sbjct: 153 ----------------------------------DVVSYTALITGYASKGYIASAQKMFD 178
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ DVVSW+++I GYA+ G +EAL+LF+ M + VRP+ T+V V++AC+ +E
Sbjct: 179 EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIEL 238
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G Q++ + +++G + + ++DL + G V A +++ D++ W +L+
Sbjct: 239 GRQVHSWI-DDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY-KDVISWNTLIGG- 295
Query: 555 KTHGNV 560
TH N+
Sbjct: 296 YTHMNL 301
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 106/224 (47%), Gaps = 12/224 (5%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYV---KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
+H ++KTGL + ++ L++ V L A +F +++P+++ W+++ G+A
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTR 512
AL L+ M S G+ PN T +L +C+ EG Q++ +++ Y +
Sbjct: 66 SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL--DL 123
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ ++ + + GR+ +A +Q + D+V + +L+ + G + ++ + I
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSS-HRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
D + A++ + YA +G +E L M + VR P +S
Sbjct: 183 KDVVSWNAMI---SGYAETGNNKEALELFKEMMKTNVR--PDES 221
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V DS L R W+ +F ++ A AFD I
Sbjct: 366 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFA----MHGRANAAFDIFSRMRKNEIE 421
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSS-----KCQPDAVLHNHILNMYGKCGSLE 132
P T+ L+SACS L LGR HI S K P + ++++ G G +
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGR----HIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 477
Query: 133 DARMVFDEMP-QRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+A + + M + + V W +++ C +G E Y Q L
Sbjct: 478 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELG-ESYAQNL 518
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 208/645 (32%), Positives = 335/645 (51%), Gaps = 80/645 (12%)
Query: 32 GEVVDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYAD 85
G++V+++ F + + DLFS K ++EAL + IRP Y
Sbjct: 143 GDLVEAWYV-FGKMAERDLFSWNVLVGGYAKAGYFDEAL---NLYHRMLWVGIRPDVYTF 198
Query: 86 --LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++ C L L GR+VH H++ + D + N ++ MY KCG + AR+VFD MP+
Sbjct: 199 PCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPR 258
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
R+ +SW AMI+G +N + L+ M + + PD T S+I AC L LGR++
Sbjct: 259 RDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREV 318
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +VIK+ + + N+LI M++ + W D A
Sbjct: 319 HGYVIKTGFVAEVSVNNSLIQMHSS------------------VGCW----------DEA 350
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VF++ME +L SW +I+G +A+ ++ M ++PD +T+ S+L AC
Sbjct: 351 EMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGL 410
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------------------- 351
L +G+ +H + + G S V V N++
Sbjct: 411 GLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII 470
Query: 352 ----LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
L +++ E F M+ S KP+ +T V+ ACA + +L G ++H + ++TGL
Sbjct: 471 LGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLG 529
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D F+ N L+DMYV+CG + A FN E DV SW+ L+ GYAQ G G A++LF +M
Sbjct: 530 FDGFLPNALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKM 588
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
S V P+ +T +L ACS G+V +GL+ + M++++ I P + + VVDLL RAGR
Sbjct: 589 IESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGR 648
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ +A +FI +M D D +W +LL +C+ + NV++G+ AA++I ++D + +LLCN+
Sbjct: 649 LEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNL 708
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA--SGND 630
YA SGKW+EVAR+ M+E + PG SW+E+ ++HA +G+D
Sbjct: 709 YADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDD 753
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 269/581 (46%), Gaps = 81/581 (13%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L LC + +AL+ D +Q + TY L+ C R+ G +VH ++ +
Sbjct: 65 LILELCLKGDLEKALIHLDSMQE-LQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT 123
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ L N +L+M+ + G L +A VF +M +R++ SW ++ G ++ G + A+ LY
Sbjct: 124 VTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLY 183
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ML G+ PD +TF ++R C GL + GR++H HVI+ S + NALI MY K
Sbjct: 184 HRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKC 243
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
I A VF + R+D SW +MI G+ + D
Sbjct: 244 GDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL------------------------- 278
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
E + LF M + + PD +T+ S++ AC + G ++H Y+IK GF + V V N
Sbjct: 279 ---EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335
Query: 350 AILQHQAG------------------------------------ELFRLFSLMLASQTKP 373
+++Q + + +++M P
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D IT V+ ACA + L+ G LH + +TGL V V N L+DMY KC + A E+F
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVF 455
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ + + +V+SW+S+I+G EAL F++M S ++PN VTLV VL+AC+ +G +
Sbjct: 456 HRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALS 514
Query: 494 EGLQLY----RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
G +++ R G +P + ++D+ R GR+ A + N + + D+ W
Sbjct: 515 CGKEIHAHALRTGLGFDGFLP-----NALLDMYVRCGRMEPAWNQFN--SCEKDVASWNI 567
Query: 550 LLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCN 586
LL G V++ + E+ + D +L+ C+
Sbjct: 568 LLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACS 608
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 38/316 (12%)
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N++I + + +A+ M + ++ + T +LL C + +G ++HSY+ K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 339 KGFYSNVPVCNAILQ---------------------------------HQAG---ELFRL 362
V + NA+L +AG E L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
+ ML +PD TF V+ C + L G ++H ++++ G DV V+N L+ MYVK
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG + SAR +F+ M D +SW+++I GY + E L+LF MR V P+ +T+ V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
++AC +G G +++ + + G + + ++ + + G EAE ++M F
Sbjct: 303 ISACEALGDERLGREVHGYVI-KTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEF-K 360
Query: 543 DIVVWKSLLASCKTHG 558
D+V W ++++ + +G
Sbjct: 361 DLVSWTAMISGYEKNG 376
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 157/348 (45%), Gaps = 35/348 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D+A EV + W + + EAL F F Q + +
Sbjct: 440 DMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSF-EAL--FFFQQMILSLKPN 496
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T ++SAC+ + +L G+++H H L + D L N +L+MY +CG +E A F+
Sbjct: 497 SVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFN 556
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS--GLCCV 197
+++V SW ++ G +Q G+ A+EL+ +M++S + PD+ TF S++ ACS G+
Sbjct: 557 SC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTD 615
Query: 198 GLGRQLHAHVIKSEHGSHLISQ----NALIAMYTKFDRILDAWNVFSSIA-RKDITSWGS 252
GL + EH H+ +++ + + R+ DA+ + D WG+
Sbjct: 616 GL-----EYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 253 MIDG---FSKLDF----ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+++ + ++ A+ +F EM++ ++ + + A +E + M +
Sbjct: 671 LLNACRIYQNVELGELAAQHIF-EMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENR 729
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
L D C+ + Q+H+++ F+ + NA+L+
Sbjct: 730 LTVDP--------GCSW---VEVAGQVHAFLTGDDFHPQIKEINAVLE 766
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 300/578 (51%), Gaps = 68/578 (11%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P L+ C+ +++ G +H L + D ++ NH++N+Y KCG++ AR +FD
Sbjct: 3 PEAIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFD 62
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EM RN+VSW+A+I+G Q GQ A+ L+ QM ++P+++ F S+I AC+ L +
Sbjct: 63 EMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQ 119
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+HA +K S NALI+MY K DA
Sbjct: 120 GLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDAL----------------------- 156
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
V N M PN S+N +IAG + + F M + PD T LL
Sbjct: 157 -----LVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGI 211
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGELF----------- 360
CTS ++GMQ+H +IK + + N I L +A ++F
Sbjct: 212 CTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISW 271
Query: 361 -----------------RLFSLML-ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
R+F ML KPD TF V+ ACA +AS+ G Q+H +++
Sbjct: 272 NTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLI 331
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+T DV V N L++MY KCGS+ ++ ++F D ++VSW+++I + G G AL+
Sbjct: 332 RTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALE 391
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
F +M++ G+ P+ VT VG+LTAC+H GLVEEG + M+ YGI P E SC++DLL
Sbjct: 392 HFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLL 451
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAGR+ EAE+++ ++ F D ++ SLL++C+ HG++ +G+ A +LK+ P ++ V
Sbjct: 452 GRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYV 511
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
LL N+YAS W VA +K G++K PG S I++
Sbjct: 512 LLSNLYASDEMWGGVAEAWKMLKYSGLKKEPGHSLIDV 549
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 208/645 (32%), Positives = 335/645 (51%), Gaps = 80/645 (12%)
Query: 32 GEVVDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYAD 85
G++V+++ F + + DLFS K ++EAL + IRP Y
Sbjct: 143 GDLVEAWYV-FGKMAERDLFSWNVLVGGYAKAGYFDEAL---NLYHRMLWVGIRPDVYTF 198
Query: 86 --LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++ C L L GR+VH H++ + D + N ++ MY KCG + AR+VFD MP+
Sbjct: 199 PCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPR 258
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
R+ +SW AMI+G +N + L+ M + + PD T S+I AC L LGR++
Sbjct: 259 RDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREV 318
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +VIK+ + + N+LI M++ + W D A
Sbjct: 319 HGYVIKTGFVAEVSVNNSLIQMHSS------------------VGCW----------DEA 350
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VF++ME +L SW +I+G +A+ ++ M ++PD +T+ S+L AC
Sbjct: 351 EMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGL 410
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------------------- 351
L +G+ +H + + G S V V N++
Sbjct: 411 GLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII 470
Query: 352 ----LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
L +++ E F M+ S KP+ +T V+ ACA + +L G ++H + ++TGL
Sbjct: 471 LGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLG 529
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D F+ N L+DMYV+CG + A FN E DV SW+ L+ GYAQ G G A++LF +M
Sbjct: 530 FDGFLPNALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKM 588
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
S V P+ +T +L ACS G+V +GL+ + M++++ I P + + VVDLL RAGR
Sbjct: 589 IESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGR 648
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ +A +FI +M D D +W +LL +C+ + NV++G+ AA++I ++D + +LLCN+
Sbjct: 649 LEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNL 708
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA--SGND 630
YA SGKW+EVAR+ M+E + PG SW+E+ ++HA +G+D
Sbjct: 709 YADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDD 753
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 269/581 (46%), Gaps = 81/581 (13%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L LC + +AL+ D +Q + TY L+ C R+ G +VH ++ +
Sbjct: 65 LILELCLKGDLEKALIHLDSMQE-LQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT 123
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ L N +L+M+ + G L +A VF +M +R++ SW ++ G ++ G + A+ LY
Sbjct: 124 VTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLY 183
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ML G+ PD +TF ++R C GL + GR++H HVI+ S + NALI MY K
Sbjct: 184 HRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKC 243
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
I A VF + R+D SW +MI G+ + D
Sbjct: 244 GDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL------------------------- 278
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
E + LF M + + PD +T+ S++ AC + G ++H Y+IK GF + V V N
Sbjct: 279 ---EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335
Query: 350 AILQHQAG------------------------------------ELFRLFSLMLASQTKP 373
+++Q + + +++M P
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D IT V+ ACA + L+ G LH + +TGL V V N L+DMY KC + A E+F
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVF 455
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ + + +V+SW+S+I+G EAL F++M S ++PN VTLV VL+AC+ +G +
Sbjct: 456 HRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALS 514
Query: 494 EGLQLY----RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
G +++ R G +P + ++D+ R GR+ A + N + + D+ W
Sbjct: 515 CGKEIHAHALRTGLGFDGFLP-----NALLDMYVRCGRMEPAWNQFN--SCEKDVASWNI 567
Query: 550 LLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCN 586
LL G V++ + E+ + D +L+ C+
Sbjct: 568 LLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACS 608
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 38/316 (12%)
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N++I + + +A+ M + ++ + T +LL C + +G ++HSY+ K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 339 KGFYSNVPVCNAILQ---------------------------------HQAG---ELFRL 362
V + NA+L +AG E L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
+ ML +PD TF V+ C + L G ++H ++++ G DV V+N L+ MYVK
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG + SAR +F+ M D +SW+++I GY + E L+LF MR V P+ +T+ V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
++AC +G G +++ + + G + + ++ + + G EAE ++M F
Sbjct: 303 ISACEALGDERLGREVHGYVI-KTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEF-K 360
Query: 543 DIVVWKSLLASCKTHG 558
D+V W ++++ + +G
Sbjct: 361 DLVSWTAMISGYEKNG 376
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 157/348 (45%), Gaps = 35/348 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D+A EV + W + + EAL F F Q + +
Sbjct: 440 DMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSF-EAL--FFFQQMILSLKPN 496
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T ++SAC+ + +L G+++H H L + D L N +L+MY +CG +E A F+
Sbjct: 497 SVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFN 556
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS--GLCCV 197
+++V SW ++ G +Q G+ A+EL+ +M++S + PD+ TF S++ ACS G+
Sbjct: 557 SC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTD 615
Query: 198 GLGRQLHAHVIKSEHGSHLISQ----NALIAMYTKFDRILDAWNVFSSIA-RKDITSWGS 252
GL + EH H+ +++ + + R+ DA+ + D WG+
Sbjct: 616 GL-----EYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 253 MIDG---FSKLDF----ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+++ + ++ A+ +F EM++ ++ + + A +E + M +
Sbjct: 671 LLNACRIYQNVELGELAAQHIF-EMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENR 729
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
L D C+ + Q+H+++ F+ + NA+L+
Sbjct: 730 LTVDP--------GCSW---VEVAGQVHAFLTGDDFHPQIKEINAVLE 766
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 191/587 (32%), Positives = 319/587 (54%), Gaps = 56/587 (9%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--------YGKCGSLEDARMV 137
L+S C S+R+ +++H HI+ + LHN + + + G + A +
Sbjct: 35 LLSKCQSIRTF---KQIHAHIIKTG------LHNTLFALSKLIEFSAVSRSGDISYAISL 85
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F+ + + N+ W +MI G S + A+ +V+M+ SG+ P+ +TF ++++C+ L
Sbjct: 86 FNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASA 145
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+Q+HAHV+K S + +LI MY + + +A VF +D S+ ++I G+
Sbjct: 146 HEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGY 205
Query: 258 S---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+ +D AR +F+EM ++ SWN +IAG A + EA+ LF +M + P+ T+
Sbjct: 206 ALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIV 265
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------ 360
S+L AC +L G + S+I +G SN+ + NA++ A ELF
Sbjct: 266 SVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER 325
Query: 361 ----------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
LF MLAS +P ITF ++ +CA + ++++G +H
Sbjct: 326 DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIH 385
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
YI K ++ + L+D+Y KCG++ +AR++F+ M+ + SW+++I G A G +
Sbjct: 386 AYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQAD 445
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+A +LF +M S G+ PN +T VG+L+AC H GLV+ G Q + M +Y I P + C+
Sbjct: 446 KAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCM 505
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
+DLL RAG EAE + M D +W SLL +C+ HG V++G+ AE + +++P N
Sbjct: 506 IDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNP 565
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A VLL NIYA +GKW++VAR+ + +RG++KVPG + IE+ +H
Sbjct: 566 GAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVH 612
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 158/339 (46%), Gaps = 36/339 (10%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
EAL+ F+ ++ N ST ++SAC+ +L LG + I + L N
Sbjct: 243 KEALLLFEDMRK-ANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNA 301
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++MY KCG L+ AR +FD+M +R+V+SW MI G + A+ L+ +ML SG+ P
Sbjct: 302 LIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPT 361
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+ TF SI+ +C+ L + LG+ +HA++ K+ + +LI +Y K I+ A VF
Sbjct: 362 EITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFD 421
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ K + SW N +I G+A A++A LFS+
Sbjct: 422 GMKIKSLASW----------------------------NAMICGLAMHGQADKAFELFSK 453
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQ 355
M + P+ +T +L AC + G Q S +++ Y P C L +
Sbjct: 454 MSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQD--YKISPKSQHYGCMIDLLGR 511
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
AG SL+ + KPD + ++GAC +E+G
Sbjct: 512 AGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELG 550
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 181/436 (41%), Gaps = 97/436 (22%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+ +C+ L S G+++H H+L D +H ++NMY + G + +A++VFD+
Sbjct: 131 TFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQS 190
Query: 142 PQRNVVSWT-------------------------------AMIAGCSQNGQENAAIELYV 170
R+ +S+T AMIAG +Q G+ A+ L+
Sbjct: 191 NFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFE 250
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M ++ + P++ T S++ AC+ + LG + + + S+L NALI MY+K
Sbjct: 251 DMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCG 310
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ A +F + +D+ SW MI G++ + CS
Sbjct: 311 DLQTARELFDDMLERDVISWNVMIGGYTHM---------------------------CS- 342
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK----------- 339
EA++LF EM + P +T S+L +C ++ G IH+YI K
Sbjct: 343 YKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTS 402
Query: 340 --GFYS-----------------------NVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
Y+ N +C + QA + F LFS M + +P+
Sbjct: 403 LIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPN 462
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELF 433
ITF ++ AC +++G Q +++ ++ ++D+ + G A L
Sbjct: 463 EITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLL 522
Query: 434 NFME-DPDVVSWSSLI 448
ME PD W SL+
Sbjct: 523 QNMEVKPDGAIWGSLL 538
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 22/246 (8%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDL--FSSLCKQNLYNEALVAFDFLQNNTNFR 77
D + C L A E+ D L R W+ + ++ +C Y EAL F + +
Sbjct: 304 DMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCS---YKEALALFREMLASG--- 357
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P+ T+ ++ +C+ L ++ LG+ +H +I + L ++++Y KCG++ AR
Sbjct: 358 VEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAAR 417
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFD M +++ SW AMI G + +GQ + A EL+ +M G+ P++ TF I+ AC
Sbjct: 418 QVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAG 477
Query: 196 CVGLGRQLHAHVI-------KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
V LG+Q + ++ KS+H +I ++ + + +L V + D
Sbjct: 478 LVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEV-----KPDGA 532
Query: 249 SWGSMI 254
WGS++
Sbjct: 533 IWGSLL 538
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 219/683 (32%), Positives = 344/683 (50%), Gaps = 123/683 (18%)
Query: 63 ALVAFDFLQNNTNFRIRP---STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
A+ A D + + IRP T++ L+ +C R +LG+ VH ++ + +PD+VL+N
Sbjct: 45 AVSALDLMARDG---IRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYN 101
Query: 120 HILNMYGKCGSLEDARMVFDEMP---QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
++++Y K G L A+ VF+ M +R+VVSW+AM+A NG+E AI+L+V+ L+ G
Sbjct: 102 SLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMG 161
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-------GSHLI-----SQNALIA 224
L+P+ + + ++IRACS VG+GR + ++K+ H G LI +N+
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 225 MYTKFDRILD----AW------------------------------------NVFSSIAR 244
Y FD++ + W +VFS+ A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 245 -------KDITSWG-----------SMIDGFSK------LDFARTVFNEMESPNLASWNT 280
+ + SW S++D ++K +D R VF+ M+ ++ SW
Sbjct: 282 LENLSLGRQLHSWAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTA 341
Query: 281 IIAG-VASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+I G + +C+ A EA++LFSEM + + P+ T S AC + G Q+ + K
Sbjct: 342 LITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFK 401
Query: 339 KGFY-------------------------------SNVPVCNAILQHQAGEL-----FRL 362
+G N+ N L L F L
Sbjct: 402 RGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFEL 461
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
S + + TF ++ A + SL G Q+H ++K GL+ + V N L+ MY K
Sbjct: 462 LSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSK 521
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ +A +F+ M++ +V+SW+S+I G+A+ G E L+ F +M GV+PN VT V +
Sbjct: 522 CGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAI 581
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSHVGLV EG + + M ++ I P E +C+VDLL RAG + +A +FIN M F
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA 641
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D++VW++ L +C+ H N ++GK AA IL+ DP AA + L NIYAS+GKWEE +
Sbjct: 642 DVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRR 701
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
MKER + K G SWIE+ K+H
Sbjct: 702 KMKERNLVKEGGCSWIEVGDKVH 724
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 206/476 (43%), Gaps = 83/476 (17%)
Query: 25 CMLLDQAGEVVDSF---LRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNF 76
C L+D + +SF + FD + + ++ + + C Q + + F + F
Sbjct: 206 CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF 265
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC---GSLED 133
T + + SAC+ L +L LGR++H + S D + +++MY KC GS++D
Sbjct: 266 ESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDD 323
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIELYVQMLQSG-LMPDQFTFGSIIRAC 191
R VFD M +V+SWTA+I G QN AI L+ +M+ G + P+ FTF S +AC
Sbjct: 324 CRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
+ +G+Q+ H K S+ N++I+M+ K DR+ DA F S++ K++ S+
Sbjct: 384 GNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYN 443
Query: 252 SMIDGFSK-LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+ +DG + LDF A L SE+ +REL
Sbjct: 444 TFLDGTCRNLDF-----------------------------EHAFELLSEIAERELGVSA 474
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL 362
T SLL + SL +G QIHS ++K G N PVCNA++ A +F L
Sbjct: 475 FTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSL 534
Query: 363 ----------------------------FSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
F+ M KP+ +T+ ++ AC+ + + G
Sbjct: 535 MDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 395 -TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + + ++D+ + G L A E N M DV+ W + +
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 26/284 (9%)
Query: 51 FSSLCKQNL--YNEALV----------AFDFLQN--NTNFRIRPSTYADLISACSSLRSL 96
F SL ++NL YN L AF+ L + T+A L+S +++ SL
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSL 490
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
+ G ++H +L + + N +++MY KCGS++ A VF M RNV+SWT+MI G
Sbjct: 491 RKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGF 550
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG-RQLHAHVIKSEHGSH 215
+++G +E + QM + G+ P++ T+ +I+ ACS + V G R ++ +
Sbjct: 551 AKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPK 610
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG--------FSKLDFARTV 266
+ ++ + + + DA+ +++ + D+ W + + KL AR +
Sbjct: 611 MEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA-ARKI 669
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
E + A++ + AS E+ + +M +R L+ +G
Sbjct: 670 L-EFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEG 712
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 313/635 (49%), Gaps = 65/635 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L+ A ++ D L+R D+I + S EAL F + + P + +
Sbjct: 17 LNNARQLFDKMLQR-DEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLAL 75
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
AC S+ G +H + + + + + +++MY K G +++ +VF EMP RNVV
Sbjct: 76 KACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVV 135
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SWTA+IAG + G A+ + M + D +TF S ++AC+ + GR++H
Sbjct: 136 SWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQT 195
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+K + N L MY K KLD+ +F
Sbjct: 196 LKKGFTAVSFVANTLATMYNKC----------------------------GKLDYGLRLF 227
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
M ++ SW TII A+ F M + ++ P+ T +++ C + +
Sbjct: 228 ESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIE 287
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------------H 354
G Q+H+++I++G ++ V N+I+
Sbjct: 288 WGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYA 347
Query: 355 QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q G E F S M +P+ F V+ C MA LE G QLH +++ GL +
Sbjct: 348 QGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTM 407
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L++MY KCGS+ A ++F+ E ++VSW+++I GYA+ G +EA+ LF+++ G
Sbjct: 408 VQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVG 467
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+RP+ VT + VL ACSH GLV+ G + + + I P+++ C++DLL RAGR+++A
Sbjct: 468 LRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDA 527
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
E I M F D VVW +LL +C+ HG+VD GKRAAE IL++DP + + L N+YA+
Sbjct: 528 ESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAK 587
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
GKW+E A + MK +GV K PG SWI+ + ++ A
Sbjct: 588 GKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSA 622
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 234/509 (45%), Gaps = 71/509 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGL 177
N +L K G L +AR +FD+M QR+ +SWT +I+G A+ L+ +M ++ GL
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
D F ++AC V G LH + +K++ + + +AL+ MY K ++ +
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF + +++ S W IIAG+ EA++
Sbjct: 125 VFKEMPLRNVVS----------------------------WTAIIAGLVRAGYNKEALAY 156
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN--AILQHQ 355
FS+M +++ D T S L AC +L G +IH +KKGF + V N A + ++
Sbjct: 157 FSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNK 216
Query: 356 AGEL---FRLFSLML-------------------------------ASQTKPDHITFNDV 381
G+L RLF M + P+ TF V
Sbjct: 217 CGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAV 276
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ CA + +E G QLH ++++ GL + V N +M MY KC L A +F + D+
Sbjct: 277 ISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDI 336
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SWS++I GYAQ GCGEEA MR G RPN VL+ C ++ ++E+G QL+
Sbjct: 337 ISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAH 396
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG--- 558
+ G+ +S ++++ ++ G + EA ++ + ++IV W +++ HG
Sbjct: 397 VLC-VGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEY-NNIVSWTAMINGYAEHGYSQ 454
Query: 559 -NVDVGKRAAENILKIDPTNSAALVLLCN 586
+D+ K+ + L+ D A++ C+
Sbjct: 455 EAIDLFKKLPKVGLRPDSVTFIAVLAACS 483
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 93/239 (38%), Gaps = 49/239 (20%)
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSG 471
+N ++ VK G L +AR+LF+ M D +SW+++I GY EAL LF +M G
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63
Query: 472 VRPNHVTLVGVLTACS-----------------------------------HVGLVEEGL 496
+ + L L AC +G V+EG
Sbjct: 64 LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 497 QLYRIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFDD---DIVVWKSLL 551
+++ M P R S ++ L RAG EA + + M D + S L
Sbjct: 124 IVFKEM-------PLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSAL 176
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVARLMGSMKERGV 609
+C G ++ G+ LK T + + L +Y GK + RL SM +R V
Sbjct: 177 KACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDV 235
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 206/643 (32%), Positives = 324/643 (50%), Gaps = 69/643 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L Q ++ D + +W+ L S K + E++ F +Q T+
Sbjct: 142 CGDLVQGRKIFDKIMNDKVFLWNL-LMSEYAKIGNFRESVSLFKKMQK-LGVVGNCYTFT 199
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ ++L ++ ++VH ++L + + N ++ Y K G +E A +FDE+ +
Sbjct: 200 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP 259
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+VVSW +MI GC NG +E+++QML G+ D T S++ AC+ + + LGR LH
Sbjct: 260 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALH 319
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+K+ ++ N L+ MY+K L+ A
Sbjct: 320 GFGVKACFSEEVVFSNTLLDMYSKC----------------------------GNLNGAT 351
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF +M + SW +IIA ++A+ LF EM + + PD TV S++ AC
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------------------- 356
SL +G +HSY+IK G SN+PV NA++ A
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 357 --------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
E LF L + Q KPD IT V+ ACA +A+L+ G ++H +I++ G
Sbjct: 472 GYSQNLLPNEALELF-LDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 530
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ V L+DMY KCG L A+ LF+ + D++SW+ +I GY G G EA+ F MR
Sbjct: 531 DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 590
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+G+ P+ + +L ACSH GL+ EG + + M+NE G+ P E +CVVDLLAR G +
Sbjct: 591 IAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNL 650
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
+A FI M D +W LL+ C+ H +V + ++ AE+I +++P N+ V+L N+Y
Sbjct: 651 SKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVY 710
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK--IHASGN 629
A + KWEEV +L M++RG ++ PG SWIE+ K I +GN
Sbjct: 711 AEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGN 753
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 355 QAGELFRLFSLMLASQTKPDHI-TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
+ G+L L+ S++ + ++ V+ CA SLE G ++H I+ G+++D +
Sbjct: 73 EMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALG 132
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
L+ MYV CG L R++F+ + + V W+ L+ YA+ G E++ LF++M+ GV
Sbjct: 133 AKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV 192
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARA----GRV 528
N T VL + +G V+E +++ +++ +G + VV+ L A G V
Sbjct: 193 GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFG------SNTAVVNSLIAAYFKFGGV 246
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A + ++++ + D+V W S++ C +G
Sbjct: 247 ESAHNLFDELS-EPDVVSWNSMINGCVVNG 275
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 312/599 (52%), Gaps = 65/599 (10%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
F F N I P Y+ +I +C L SL+LG+ VH I+ + +LN
Sbjct: 205 GFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLN 264
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY K GS+ED+ VF+ M + N VSW AMI+GC+ NG A +L+V+M P+ +T
Sbjct: 265 MYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 324
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
S+ +A L V +G+++ + +++ ALI MY+K + DA +VF +
Sbjct: 325 LVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT-- 382
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+F N WN +I+G + + EA+ L+ +M
Sbjct: 383 -----------------NFINCGVN-------TPWNAMISGYSQSGCSQEALELYVQMCQ 418
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-YSNVPVCNAIL---------- 352
+ D T S+ A + SL G +H ++K G V V NAI
Sbjct: 419 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLE 478
Query: 353 -------------------------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACA 386
Q GE F LM P+ TF+ V+ +CA
Sbjct: 479 DVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCA 538
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
++ LE G Q+H + K GL + + + L+DMY KCGS+ A ++F+ + +PD+VSW++
Sbjct: 539 SLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTA 598
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I GYAQ G E+AL+LFRRM SG++ N VTL+ VL ACSH G+VEEGL ++ M++ Y
Sbjct: 599 IISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGY 658
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
G++P E +C++DLL R GR+ +A +FI +M + + +VW++LL C+ HGNV++G+ A
Sbjct: 659 GVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIA 718
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A IL I P SA VLL N Y +G +E+ L MK++GV+K PG SWI ++ ++H
Sbjct: 719 ARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVH 777
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 272/549 (49%), Gaps = 29/549 (5%)
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPD--AVLHNHILNMYGKCGSLEDARMVFDEMP 142
D++ C+ S++ + VH +L S + VL NH ++Y KC A VFDEMP
Sbjct: 123 DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP 182
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
QRNV SWT MI G +++G + + +ML SG++PD+F + +II++C GL + LG+
Sbjct: 183 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 242
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG------ 256
+HA ++ +H+ +L+ MY K I D++ VF+ + + SW +MI G
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 302
Query: 257 -FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN---EAMSLFSEMGDRELIPDGLT 312
D + N +PN+ + ++ V + N E + SE+G + G
Sbjct: 303 HLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 362
Query: 313 VRSLLCACTSPLSLYQGMQIH-SYIIKKGFYSNVPVCNAILQ--HQAG---ELFRLFSLM 366
+ + C SL+ + + I G N P NA++ Q+G E L+ M
Sbjct: 363 LIDMYSKCG---SLHDARSVFDTNFINCGV--NTP-WNAMISGYSQSGCSQEALELYVQM 416
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF-VMNGLMDMYVKCGS 425
+ D T+ V A AA SL+ G +H ++K GL L V V N + D Y KCG
Sbjct: 417 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 476
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L R++F+ ME+ D+VSW++L+ Y+Q GEEAL F MR G PN T VL +
Sbjct: 477 LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLIS 536
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C+ + +E G Q++ ++ + G+ + S ++D+ A+ G + EA ++++ + DIV
Sbjct: 537 CASLCFLEYGRQVHGLL-CKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-NPDIV 594
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA-SSGKWEEVARLMGSM 604
W ++++ HG V+ + +++ + A+ LLC ++A S G E
Sbjct: 595 SWTAIISGYAQHGLVEDALQLFRR-MELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQ 653
Query: 605 KERGVRKVP 613
E G VP
Sbjct: 654 MEDGYGVVP 662
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ C L+ +V D R W L ++ + +L EAL F ++ F
Sbjct: 469 DAYSKCGFLEDVRKVFDRMEERDIVSWT-TLVTAYSQSSLGEEALATFCLMREE-GFAPN 526
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T++ ++ +C+SL L+ GR+VH + + + + + +++MY KCGS+ +A VFD
Sbjct: 527 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFD 586
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
++ ++VSWTA+I+G +Q+G A++L+ +M SG+ + T ++ ACS
Sbjct: 587 KISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 639
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 201/598 (33%), Positives = 309/598 (51%), Gaps = 73/598 (12%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH-ILN 123
V FDF TN+ R Y L++ CSSL L ++H ++++ C + +L I+
Sbjct: 19 VLFDF---RTNYHSRSFNY--LLNCCSSLPDLS---RIHALVVTNGCGQNLLLSTKLIIT 70
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
+++ AR +FD+MP+R+V W +I G + G A+ LY M +GL PD +T
Sbjct: 71 ACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYT 130
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F ++R+C+ L + G+++H +++K S + Q++L+AMY++ L
Sbjct: 131 FPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGM-------- 182
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
VF EM N+ SW +IAG E + +F EM
Sbjct: 183 --------------------ELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVG 222
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------- 352
P+ +T+ S+L AC L G IH Y IK G +V + NA++
Sbjct: 223 SGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVET 282
Query: 353 ------------------------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAA 387
Q+ AG +LF M A + D+IT V+ ACA+
Sbjct: 283 ARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACAS 342
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ +L G +H + + GL ++V + N L+DMY KCG++ ARE+F + VVSW+S+
Sbjct: 343 LGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSM 402
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I A G GE+ALKLF RM+ GV+PN T V TAC H GLVEEG + + M +Y
Sbjct: 403 IGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYS 462
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
I+P E +C+VDLL RAG + EA +FI++M + D+ VW +LL SC+ H N+++ + A
Sbjct: 463 IMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVA 522
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
E + +DP VL+ NIYA +G+WE+ ARL M+ER ++K+PG S +E+ + H
Sbjct: 523 EKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFH 580
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 312/599 (52%), Gaps = 65/599 (10%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
F F N I P Y+ +I +C L SL+LG+ VH I+ + +LN
Sbjct: 151 GFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLN 210
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY K GS+ED+ VF+ M + N VSW AMI+GC+ NG A +L+V+M P+ +T
Sbjct: 211 MYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 270
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
S+ +A L V +G+++ + +++ ALI MY+K + DA +VF +
Sbjct: 271 LVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT-- 328
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+F N WN +I+G + + EA+ L+ +M
Sbjct: 329 -----------------NFINCGVN-------TPWNAMISGYSQSGCSQEALELYVQMCQ 364
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-YSNVPVCNAIL---------- 352
+ D T S+ A + SL G +H ++K G V V NAI
Sbjct: 365 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLE 424
Query: 353 -------------------------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACA 386
Q GE F LM P+ TF+ V+ +CA
Sbjct: 425 DVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCA 484
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
++ LE G Q+H + K GL + + + L+DMY KCGS+ A ++F+ + +PD+VSW++
Sbjct: 485 SLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTA 544
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I GYAQ G E+AL+LFRRM SG++ N VTL+ VL ACSH G+VEEGL ++ M++ Y
Sbjct: 545 IISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGY 604
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
G++P E +C++DLL R GR+ +A +FI +M + + +VW++LL C+ HGNV++G+ A
Sbjct: 605 GVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIA 664
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A IL I P SA VLL N Y +G +E+ L MK++GV+K PG SWI ++ ++H
Sbjct: 665 ARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVH 723
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 272/549 (49%), Gaps = 29/549 (5%)
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPD--AVLHNHILNMYGKCGSLEDARMVFDEMP 142
D++ C+ S++ + VH +L S + VL NH ++Y KC A VFDEMP
Sbjct: 69 DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP 128
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
QRNV SWT MI G +++G + + +ML SG++PD+F + +II++C GL + LG+
Sbjct: 129 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 188
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG------ 256
+HA ++ +H+ +L+ MY K I D++ VF+ + + SW +MI G
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 248
Query: 257 -FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN---EAMSLFSEMGDRELIPDGLT 312
D + N +PN+ + ++ V + N E + SE+G + G
Sbjct: 249 HLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 308
Query: 313 VRSLLCACTSPLSLYQGMQI-HSYIIKKGFYSNVPVCNAILQ--HQAG---ELFRLFSLM 366
+ + C SL+ + + I G N P NA++ Q+G E L+ M
Sbjct: 309 LIDMYSKCG---SLHDARSVFDTNFINCGV--NTP-WNAMISGYSQSGCSQEALELYVQM 362
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF-VMNGLMDMYVKCGS 425
+ D T+ V A AA SL+ G +H ++K GL L V V N + D Y KCG
Sbjct: 363 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 422
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L R++F+ ME+ D+VSW++L+ Y+Q GEEAL F MR G PN T VL +
Sbjct: 423 LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLIS 482
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C+ + +E G Q++ ++ + G+ + S ++D+ A+ G + EA ++++ + DIV
Sbjct: 483 CASLCFLEYGRQVHGLL-CKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-NPDIV 540
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA-SSGKWEEVARLMGSM 604
W ++++ HG V+ + +++ + A+ LLC ++A S G E
Sbjct: 541 SWTAIISGYAQHGLVEDALQLFRR-MELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQ 599
Query: 605 KERGVRKVP 613
E G VP
Sbjct: 600 MEDGYGVVP 608
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ C L+ +V D R W L ++ + +L EAL F ++ F
Sbjct: 415 DAYSKCGFLEDVRKVFDRMEERDIVSWT-TLVTAYSQSSLGEEALATFCLMREE-GFAPN 472
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T++ ++ +C+SL L+ GR+VH + + + + + +++MY KCGS+ +A VFD
Sbjct: 473 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFD 532
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
++ ++VSWTA+I+G +Q+G A++L+ +M SG+ + T ++ ACS
Sbjct: 533 KISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 585
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 300/530 (56%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + + N++ W M G + + +A++LYV M+ GL+P+ +TF ++++C+
Sbjct: 47 VFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 106
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K L +LI+MY + R+ DA VF +D+ S+ ++I G
Sbjct: 107 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKG 166
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ ++ A+ +F+E+ ++ SWN +I+G A N EA+ LF +M + PD T+
Sbjct: 167 YASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 226
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL------------ 359
+++ AC S+ G Q+HS+I GF SN+ + NA+ L + GEL
Sbjct: 227 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY 286
Query: 360 ----------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
LF ML S P+ +T ++ ACA + ++++G +
Sbjct: 287 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 346
Query: 398 HCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G+A + L+DMY KCG + +A ++FN + + SW+++I G+A G
Sbjct: 347 HVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 406
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+ + +F RMR +G+ P+ +T VG+L+ACSH G+++ G ++R M +Y + P E
Sbjct: 407 RADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHY 466
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL +G EAE+ IN M + D V+W SLL +CK HGNV++G+ A+N++KI+P
Sbjct: 467 GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEP 526
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYA++G+W EVA + ++G++KVPG S IEI + +H
Sbjct: 527 ENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVH 576
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 194/410 (47%), Gaps = 43/410 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+ +C+ ++ + G+++H H+L C D +H +++MY + G LEDA VFDE
Sbjct: 93 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDES 152
Query: 142 PQRNVVS-------------------------------WTAMIAGCSQNGQENAAIELYV 170
P R+VVS W AMI+G ++ G A+EL+
Sbjct: 153 PHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 212
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M+++ + PD+ T +++ AC+ + LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 213 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 272
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIA 283
+ A +F + KD+ SW ++I G++ ++ A +F EM E+PN + +I+
Sbjct: 273 ELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 332
Query: 284 GVASCSNANEAMSLFSEMGDR-ELIPDGLTVR-SLLCACTSPLSLYQGMQIHSYIIKKGF 341
A + + + R + + + ++R SL+ + Q+ + I+ K
Sbjct: 333 ACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 392
Query: 342 YS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
S N + + +A F +FS M + +PD ITF ++ AC+ L++G +
Sbjct: 393 SSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 452
Query: 401 IMKTGLALDVFVMNGLM-DMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + G M D+ G A E+ N ME +PD V W SL+
Sbjct: 453 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 502
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 174/375 (46%), Gaps = 48/375 (12%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+++ + FD+I W+ + S + Y EAL F + TN R ST ++
Sbjct: 173 IENAQKMFDEIPVKDVVSWN-AMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVV 230
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ S++LGR+VH I + + N ++++Y KCG LE A +F+ +P ++V+
Sbjct: 231 SACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVI 290
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +I G + A+ L+ +ML+SG P+ T SI+ AC+ L + +GR +H ++
Sbjct: 291 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 350
Query: 208 IKSEHGSHLIS--QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
K G S + +LI MY K I A VF+SI K ++SW +MI GF
Sbjct: 351 DKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF-------- 402
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
A A+ + +FS M + PD +T LL AC+
Sbjct: 403 --------------------AMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 442
Query: 326 LYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLAS-QTKPDHITFN 379
L G I + + Y P C L +G LF+ M+ + + +PD + +
Sbjct: 443 LDLGRHIFRSMTQD--YKMTPKLEHYGCMIDLLGHSG-LFKEAEEMINTMEMEPDGVIWC 499
Query: 380 DVMGACAAMASLEMG 394
++ AC ++E+G
Sbjct: 500 SLLKACKMHGNVELG 514
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 147/306 (48%), Gaps = 41/306 (13%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +VF ++ PNL WNT+ G A S+ A+ L+ M L+P+ T L
Sbjct: 38 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFL 97
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAGELFRLFSLMLASQTKPD 374
L +C + +G QIH +++K G ++ V +++ Q G L +
Sbjct: 98 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL------------EDA 145
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
H F++ DV L+ Y G + +A+++F+
Sbjct: 146 HKVFDE------------------------SPHRDVVSYTALIKGYASRGYIENAQKMFD 181
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ DVVSW+++I GYA+ G +EAL+LF+ M + VRP+ T+V V++AC+ G +E
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 241
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G Q++ + +++G + + ++DL ++ G + A + + D++ W +L+
Sbjct: 242 GRQVHSWI-DDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY-KDVISWNTLIGG- 298
Query: 555 KTHGNV 560
TH N+
Sbjct: 299 YTHMNL 304
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 16/150 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V +S L + W+ +F ++ A +FD I
Sbjct: 369 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA----MHGRADASFDIFSRMRKNGIE 424
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQ-----PDAVLHNHILNMYGKCGSLE 132
P T+ L+SACS L LGR HI S Q P + ++++ G G +
Sbjct: 425 PDDITFVGLLSACSHSGMLDLGR----HIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 480
Query: 133 DARMVFDEMP-QRNVVSWTAMIAGCSQNGQ 161
+A + + M + + V W +++ C +G
Sbjct: 481 EAEEMINTMEMEPDGVIWCSLLKACKMHGN 510
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 310/584 (53%), Gaps = 67/584 (11%)
Query: 81 STYADLI--SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+TY ++ SA +S +L+ ++VH H + D + N +++MY KCGS++DAR+VF
Sbjct: 233 TTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVF 292
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D M R+V+SW AMI G +QNG + A ++++M Q G +PD T+ S++
Sbjct: 293 DGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
+++H H ++ S L +A + MY + I DA +F +A +++T
Sbjct: 353 WVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVT---------- 402
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+WN +I GVA EA+SLF +M PD T ++L
Sbjct: 403 ------------------TWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILS 444
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------- 352
A +L ++HSY I G ++ V NA++
Sbjct: 445 ANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTT 503
Query: 353 ---------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
QH G E F LF ML PD T+ ++ ACA+ +LE ++H + +
Sbjct: 504 WTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAV 563
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
GL D+ V N L+ MY KCGS+ AR +F+ M + DV SW+ +I G AQ G G +AL
Sbjct: 564 NAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALD 623
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF +M+ G +PN + V VL+ACSH GLV+EG + + + +YGI PT E +C+VDLL
Sbjct: 624 LFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLL 683
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG++ EA+ FI M + W +LL +C T+GN+++ + AA+ LK+ P +++ V
Sbjct: 684 GRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYV 743
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
LL NIYA++G WE+ + M+ RG+RK PG+SWIE+ +IH+
Sbjct: 744 LLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHS 787
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 248/518 (47%), Gaps = 75/518 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY ++ AC S SL+ G+K+H HI+ S Q D + ++NMY KCGS++DA+++FD+M
Sbjct: 32 TYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKM 91
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+RNV+SWT MI G + G+ A ++QM + G +P+ +T+ SI+ A + + +
Sbjct: 92 VERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVK 151
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++H+H + + L NAL+ MY K I DA VF + +DI SW M
Sbjct: 152 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVM-------- 203
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL--CA 319
I G+A EA SLF +M +P+ T S+L A
Sbjct: 204 --------------------IGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASA 243
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------------------- 357
TS +L ++H + K GF S++ V NA++ A
Sbjct: 244 ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISW 303
Query: 358 --------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E F +F M PD T+ ++ + + E ++H + ++
Sbjct: 304 NAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVE 363
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
GL D+ V + + MY++CGS+ A+ +F+ + +V +W+++I G AQ CG EAL L
Sbjct: 364 VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSL 423
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVD 520
F +MR G P+ T V +L+A +VG EE L+ + + + + G++ R + +V
Sbjct: 424 FLQMRREGFFPDATTFVNILSA--NVG--EEALEWVKEVHSYAIDAGLVDLRV-GNALVH 478
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ A+ G A+ + M + ++ W +++ HG
Sbjct: 479 MYAKCGNTMYAKQVFDDMV-ERNVTTWTVMISGLAQHG 515
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 200/411 (48%), Gaps = 12/411 (2%)
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
MI G ++ G A+++Y QM + G P++ T+ SI++AC + G+++HAH+I+S
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN--- 268
S + + AL+ MY K I DA +F + +++ SW MI G + + F+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 269 EMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+M+ PN ++ +I+ AS + S + L D +L+
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-ELFRLFSLMLASQTKPDHITFNDVMG 383
S+ + ++++ +S + + QH G E F LF M P+ T+ ++
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 384 ACA--AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
A A + +LE ++H + K G D+ V N L+ MY KCGS+ AR +F+ M D DV
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SW+++I G AQ GCG EA +F +M+ G P+ T + +L G E ++++
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK- 359
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E G++ S V + R G + +A+ +++A ++ W +++
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAV-RNVTTWNAMIG 409
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 2/203 (0%)
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
A + +++S M +P+ IT+ ++ AC + SL+ G ++H +I+++G DV V
Sbjct: 11 AEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETA 70
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L++MYVKCGS+ A+ +F+ M + +V+SW+ +I G A +G G+EA F +M+ G PN
Sbjct: 71 LVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPN 130
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
T V +L A + G +E +++ N G+ + +V + A++G + +A
Sbjct: 131 SYTYVSILNANASAGALEWVKEVHSHAVNA-GLALDLRVGNALVHMYAKSGSIDDARVVF 189
Query: 536 NQMAFDDDIVVWKSLLASCKTHG 558
+ M + DI W ++ HG
Sbjct: 190 DGMV-ERDIFSWTVMIGGLAQHG 211
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 316/612 (51%), Gaps = 65/612 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L + N + EA F L + + P + ++ S+ +LGR VH +L
Sbjct: 17 LIHGYAQSNKFIEAFELFARLHGEGH-ELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKV 75
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + +++ Y G + AR VFDE+ +++VSWT MIA ++N + A+E +
Sbjct: 76 GYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFF 135
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
QM +G P+ FTF +++AC GL G+ +H V+K+ + L L+ +YT+
Sbjct: 136 SQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRC 195
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
DAW F + + D+ W M I+ A
Sbjct: 196 GDNDDAWRAFGDMPKNDVIPWSFM----------------------------ISRFAQSG 227
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+ +A+ +F +M +IP+ T S+L A SL IH + +K G ++V V N
Sbjct: 228 QSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSN 287
Query: 350 AILQ--------HQAGELFR----------------------------LFSLMLASQTKP 373
A++ Q+ ELF LFS ML Q +
Sbjct: 288 ALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQA 347
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+T++ ++ ACA +A+LE+G Q+HC KT DV V N L+DMY KCGS+ AR +F
Sbjct: 348 TEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMF 407
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ ++ D VSW+++I GY+ G G EA+K+F M+ + +P+ +T VGVL+ACS+ G ++
Sbjct: 408 DMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLD 467
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
EG Q + M+ +YGI P E +C+V L+ R+G + +A FI + F+ +++W++LL +
Sbjct: 468 EGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGA 527
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C H +V++G+ +A+ +L+++P + A+ VLL NIYA + +W VA + MK +GV+K P
Sbjct: 528 CVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEP 587
Query: 614 GQSWIEIQTKIH 625
G SWIE Q +H
Sbjct: 588 GLSWIENQGNVH 599
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 148/342 (43%), Gaps = 51/342 (14%)
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR--ELIPDGLTVRSLLCACTSP 323
VF+EM N S+ T+I G A + EA LF+ + EL P T L
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------------------- 356
L G +H ++K G+ SN + A++ +
Sbjct: 62 AEL--GRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119
Query: 357 ---------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
E FS M + KP++ TF V+ AC + + + G +HC ++KT
Sbjct: 120 ASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D++V GL+++Y +CG A F M DV+ WS +I +AQ G E+AL++F +M
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVDLLAR 524
R + V PN T VL A + + E L L + + + G+ + ++ A+
Sbjct: 240 RRAFVIPNQFTFSSVLQASADI----ESLDLSKTIHGHALKAGLSTDVFVSNALMACYAK 295
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
G + ++ + ++ D + V W +++ S G+ G+RA
Sbjct: 296 CGCIEQSMELFEALS-DRNDVSWNTIIVSYVQLGD---GERA 333
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 330/626 (52%), Gaps = 25/626 (3%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C D + +D A + D + W + + KQ +L FD ++
Sbjct: 179 CTSLIDFYTKHACIDDARLLFDGLQVKTSFTWT-TIIAGYSKQGRSQVSLKLFDQMKEG- 236
Query: 75 NFRIRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
+ P Y + ++SAC L+ L+ G+++H ++L S D + N ++ Y KC ++
Sbjct: 237 --HVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQ 294
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
R +FD M +NVVSWT +IAGC QN A++L+V+M + G PD F S++ +C
Sbjct: 295 LGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCG 354
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L + GRQ+HA+ IK + +N LI MY K D + DA VF+ +A D+ S+ +
Sbjct: 355 SLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNA 414
Query: 253 MIDGFSK-------LDFARTVFNEMESPNLASWNTIIAGVASCSN---ANEAMSLFSEMG 302
MI+G+S+ LD R + + SP L + +++ AS + +N+ L + G
Sbjct: 415 MIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYG 474
Query: 303 DRELIPDGLTVRSLLCACT---SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
G + + C+ +++ +Q ++ +S Q + E
Sbjct: 475 VSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGY-----TQQSENEES 529
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+L+ + S+ KP+ TF V+ A + +ASL G Q H ++K G D FV N L+DM
Sbjct: 530 LKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDM 589
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y K GS+ A + F D W+S+I YAQ G E+AL++F M G++PN+VT
Sbjct: 590 YAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTF 649
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
VGVL+ACSH GL++ G + M +++GI P E C+V LL RAG+++EA++FI +M
Sbjct: 650 VGVLSACSHTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMP 708
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
VVW+SLL++C+ GNV++G AAE + +P +S + VLL NI+AS G W V R
Sbjct: 709 IKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRR 768
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
L M GV K PG SWIE+ +IH
Sbjct: 769 LREKMDISGVVKEPGCSWIEVNNEIH 794
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/548 (25%), Positives = 255/548 (46%), Gaps = 70/548 (12%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EAL+ F + N + A ++ AC+ L ++H ++ D + +
Sbjct: 123 EALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSL 182
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++ Y K ++DAR++FD + + +WT +IAG S+ G+ +++L+ QM + + PD+
Sbjct: 183 IDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDK 242
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
+ S++ AC L + G+Q+H +V++S + N I Y K ++ +F
Sbjct: 243 YVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDR 302
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+ K++ S W T+IAG S +A+ LF EM
Sbjct: 303 MVDKNVVS----------------------------WTTVIAGCMQNSFHRDALDLFVEM 334
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------- 352
PD S+L +C S ++L +G Q+H+Y IK ++ V N ++
Sbjct: 335 ARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSL 394
Query: 353 ---------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
Q + E LF M S + P + F ++G
Sbjct: 395 TDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVS 454
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A++ LE+ Q+H I+K G++LD F + L+D+Y KC +G AR +F ++D D+V W+
Sbjct: 455 ASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWT 514
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQN 504
++ GY Q EE+LKL++ ++ S ++PN T V+TA S++ + G Q + ++++
Sbjct: 515 AMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKM 574
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAED-FINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
+ P + +VD+ A++G + EA FI+ D W S++A+ HG +
Sbjct: 575 GFDDDPFVA--NTLVDMYAKSGSIEEAHKAFISTNW--KDTACWNSMIATYAQHGEAEKA 630
Query: 564 KRAAENIL 571
+ E+++
Sbjct: 631 LQVFEDMI 638
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 224/491 (45%), Gaps = 68/491 (13%)
Query: 100 RKVHDHILSSKCQP-DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
+K+H I+ D L N +L+ Y K + A +FD M +N+V+W++M++ +
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 159 NGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLI 217
+ A+ L+VQ ++S P+++ S++RAC+ + Q+H V+K + +
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS 277
+LI YTK I DA +F + K +W
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTW--------------------------- 210
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
TIIAG + + ++ LF +M + + PD + S+L AC L G QIH Y++
Sbjct: 211 -TTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVL 269
Query: 338 KKGFYSNVPVCNAILQ-----HQAGELFRLFSLMLASQT--------------------- 371
+ G +V + N + H+ +LF M+
Sbjct: 270 RSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALD 329
Query: 372 ----------KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
PD V+ +C ++ +LE G Q+H Y +K + D FV NGL+DMY
Sbjct: 330 LFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 389
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KC SL AR++FN M D+VS++++I GY++ EAL LFR MR S P + V
Sbjct: 390 KCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVS 449
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+L + + +E Q++ ++ +YG+ S ++D+ ++ RV +A ++ D
Sbjct: 450 LLGVSASLYHLELSNQIHGLII-KYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQ-D 507
Query: 542 DDIVVWKSLLA 552
DIVVW ++ +
Sbjct: 508 KDIVVWTAMFS 518
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 321/593 (54%), Gaps = 49/593 (8%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN---MYGKCGSLED 133
R PS L+ C +L+SL R +H ++ + + +L + L
Sbjct: 1 RNHPSL--SLLHNCKTLQSL---RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPY 55
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A VF+ + + N++ W M G + + +AI+LYV M+ GL+P+ +TF ++++C+
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L G+Q+H HV+K + L +LI+MY K R DA VF + +D+ S+ ++
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175
Query: 254 IDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
I G++ ++ A+ +F+E+ ++ SWN II+G A N EA+ LF EM + PD
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGE------LFR- 361
T+ +++ AC S+ G Q+HS+I G SN+ + NA+ L + GE LF+
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295
Query: 362 ---------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
LF ML S P+ +T ++ ACA + +++ G
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355
Query: 395 TQLHCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+H YI K G+ + L+DMY KCG + +A ++FN M + + +++I G+A
Sbjct: 356 RWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFA 415
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G A +F RMR +G+ P+ +T VG+L+ACSH G+++ G +++R M Y I P
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKL 475
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E C++DLL G EAE+ IN M + D V+W SLL +CK HGNV++G+ A+ ++K
Sbjct: 476 EHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIK 535
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
I+P N + VLL NIYA++G+W EVA + + ++G++KVPG S IEI + +H
Sbjct: 536 IEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVH 588
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 171/384 (44%), Gaps = 48/384 (12%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
++S + FD+I W+ + S EAL F + TN + ST ++
Sbjct: 185 IESAQKMFDEIPVKDVVSWN-AIISGYADTGNNKEALDLFKEMMK-TNVKPDESTMVTVV 242
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ S+QLGR+VH I + + N ++++Y KCG +E A +F + ++V+
Sbjct: 243 SACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVI 302
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW MI G + A+ L+ +ML+SG P+ T SI+ AC+ L + GR +H ++
Sbjct: 303 SWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYI 362
Query: 208 IKSEHGSHLIS--QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
K G S + +LI MY K I A VF+S+ + +++ +MI GF
Sbjct: 363 DKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGF-------- 414
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
A AN A +FS M + PD +T LL AC+
Sbjct: 415 --------------------AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 454
Query: 326 LYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQT-KPDHITFN 379
L G +I + + Y P C L G LF+ M+ + T +PD + +
Sbjct: 455 LDLGRRIFRSMTQN--YKITPKLEHYGCMIDLLGHLG-LFKEAEEMINTMTMEPDGVIWC 511
Query: 380 DVMGACAAMASLEMGTQLHCYIMK 403
++ AC ++E+G ++K
Sbjct: 512 SLLKACKMHGNVELGESFAQKLIK 535
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 302/576 (52%), Gaps = 64/576 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+++AC+ R L+ GRKVH ++ + D N +++MY K G + A +VF ++P+ +
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETD 267
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VVSW A I+GC +G + A+EL +QM SGL+P+ FT SI++AC+G LGRQ+H
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHG 327
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++K+ S L+ MY K + DA VF I ++D
Sbjct: 328 FMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRD------------------- 368
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
L WN +I+G + + EA+SLF M + T+ ++L + S +
Sbjct: 369 ---------LVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEA 419
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------------- 352
+ Q+H+ K GF S+ V N ++
Sbjct: 420 ISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITA 479
Query: 353 --QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
Q GE +LF ML PD + ++ ACA++++ E G Q+H +++K D
Sbjct: 480 LSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 539
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
VF N L+ Y KCGS+ A F+ + + VVSWS++I G AQ G G+ AL +F RM
Sbjct: 540 VFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVD 599
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
+ PNH+T+ VL AC+H GLV+E + + M+ +GI T E +C++DLL RAG++
Sbjct: 600 EHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLD 659
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
+A + +N M F + VW +LLA+ + H + ++G+ AAE + ++P S VLL N YA
Sbjct: 660 DAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYA 719
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
S+G W++VA++ MK+ V+K P SW+E++ K+H
Sbjct: 720 SAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVH 755
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/551 (24%), Positives = 250/551 (45%), Gaps = 76/551 (13%)
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP-QRNVVSWTAMIAGC 156
G ++H +++ D + N ++ MYG G +++ARMVFDE +RN VSW +++
Sbjct: 118 FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
+N + + A++++ +M+ G+ P++F F ++ AC+G + GR++HA VI++ + +
Sbjct: 178 VKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDV 237
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+ NAL+ MY+K I A VF + D+
Sbjct: 238 FTANALVDMYSKLGDIRMAAVVFGKVPETDVV---------------------------- 269
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
SWN I+G + A+ L +M L+P+ T+ S+L AC + G QIH ++
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM 329
Query: 337 IK--------------------------KGFYSNVPVCNAILQH----------QAGELF 360
+K K + +P + +L + Q E
Sbjct: 330 VKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEAL 389
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
LF M + T V+ + A++ ++ Q+H K G D V+NGL+D Y
Sbjct: 390 SLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSY 449
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KC L A +F D+++++S+I +Q GE+A+KLF M G+ P+ L
Sbjct: 450 WKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLS 509
Query: 481 GVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+L AC+ + E+G Q++ +++ ++ + + +V A+ G + +A+ + +
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQF--MSDVFAGNALVYTYAKCGSIEDADLAFSGLP 567
Query: 540 FDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWE 595
+ +V W +++ HG+ +DV R + + + +++ CN +G +
Sbjct: 568 -EKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACN---HAGLVD 623
Query: 596 EVARLMGSMKE 606
E R SMKE
Sbjct: 624 EAKRYFNSMKE 634
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/600 (24%), Positives = 244/600 (40%), Gaps = 106/600 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T L++ ++ +SL G +H H+L S AV NH+L+ Y KC AR VFDE+
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P VSW++++ S N A+ + M + ++F +++ G G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPD---AGFGT 120
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLHA + + G + NAL+AMY GF +D
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYG----------------------------GFGFVD 152
Query: 262 FARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
AR VF+E N SWN +++ + A+ +F EM + P+ ++ AC
Sbjct: 153 EARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNAC 212
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNA------------------------------ 350
T L G ++H+ +I+ G+ +V NA
Sbjct: 213 TGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWN 272
Query: 351 ------ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+L L M +S P+ T + ++ ACA + +G Q+H +++K
Sbjct: 273 AFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKA 332
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
D ++ GL+DMY K G L A+++F+++ D+V W++LI G + EAL LF
Sbjct: 333 NADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLF 392
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV----- 519
RMR G N TL VL + + + + + Q++ + + + G + + ++
Sbjct: 393 CRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAE-KLGFLSDSHVVNGLIDSYWK 451
Query: 520 -DLLARAGRVHEAEDFINQMAF----------------------------DDDIVVWKSL 550
D L A RV E + +AF D D V SL
Sbjct: 452 CDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSL 511
Query: 551 LASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
L +C + + GK+ +++K ++ A L YA G E+ + E+GV
Sbjct: 512 LNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGV 571
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 179/408 (43%), Gaps = 68/408 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + ++ AC+ + LGR++H ++ + D + +++MY K G L+DA+ VFD +
Sbjct: 305 TLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI 364
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
PQR++V W A+I+GCS Q A+ L+ +M + G ++ T +++++ + L + R
Sbjct: 365 PQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTR 424
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+HA K S N LI Y K D + A+ VF DI ++ SMI S+
Sbjct: 425 QVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQ-- 482
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
C + +A+ LF EM + L PD + SLL AC
Sbjct: 483 --------------------------CDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACA 516
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------------- 352
S + QG Q+H+++IK+ F S+V NA++
Sbjct: 517 SLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSA 576
Query: 353 ------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
QH G+ +F M+ P+HIT V+ AC A L + + MK
Sbjct: 577 MIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEM 635
Query: 406 LALDVFVMNG--LMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG 450
++ + ++D+ + G L A EL N M + W +L+
Sbjct: 636 FGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 71/113 (62%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P + L++AC+SL + + G++VH H++ + D N ++ Y KCGS+EDA + F
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFS 564
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+P++ VVSW+AMI G +Q+G A++++ +M+ + P+ T S++ AC+
Sbjct: 565 GLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACN 617
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 213/628 (33%), Positives = 315/628 (50%), Gaps = 70/628 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
+D A V D+ R W + + + +A VA + +RP + A
Sbjct: 188 IDAAMSVFDALPARNPVTWT----AVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLAS 243
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
SACS L ++ GR++H + + + DA + N ++++Y KC L AR +FD M RN
Sbjct: 244 AASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRN 303
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+VSWT MIAG QN + A+ ++ Q+ Q+G PD F SI+ +C L + GRQ+HA
Sbjct: 304 LVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHA 363
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
HVIK++ S +NALI MY K + + +A VF ++A D
Sbjct: 364 HVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAI----------------- 406
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
S+N +I G A + A+ +F +M L P LT SLL +S
Sbjct: 407 -----------SYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSD 455
Query: 326 LYQGMQIHSYIIKKG-------------FYS------------------NVPVCNAIL-- 352
L QIH I+K G YS ++ + NA++
Sbjct: 456 LELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFG 515
Query: 353 --QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
Q++ GE +LF+ + S P+ TF ++ + +AS+ G Q H I+K G D
Sbjct: 516 LAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSD 575
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
+ N L+DMY KCG + R LF DV+ W+S+I YAQ G EEAL +F M
Sbjct: 576 PHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEG 635
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
+GV PN+VT V VL+AC+H GLV+EGL + M+ +Y + P E + VV+L R+G++H
Sbjct: 636 AGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLH 695
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
A++FI +M + +W+SLL++C GNV++G+ A E L DP +S VL+ NIYA
Sbjct: 696 AAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYA 755
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSW 617
S G W + +L M GV K PG SW
Sbjct: 756 SKGLWADAQKLRQGMDCAGVVKEPGYSW 783
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 256/515 (49%), Gaps = 68/515 (13%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A + AC+ R+ + G +VH + + ++N+Y K G ++ A VFD +P
Sbjct: 141 ASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPA 200
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
RN V+WTA+I G SQ GQ A+EL+ +M G+ PD+F S ACSGL V GRQ+
Sbjct: 201 RNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQI 260
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H + ++ S NALI +Y K R+L A +F S+ +++ SW +MI G+ +
Sbjct: 261 HGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQ---- 316
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
N +++ EAMS+F ++ PD S+L +C S
Sbjct: 317 ----NSLDT--------------------EAMSMFWQLSQAGWQPDVFACTSILNSCGSL 352
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------------------- 356
+++QG Q+H+++IK S+ V NA++ A
Sbjct: 353 AAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMI 412
Query: 357 ------GEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
G+L +F M KP +TF ++G ++ + LE+ Q+H I+K+G +
Sbjct: 413 EGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTS 472
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
LD++ + L+D+Y K + A+ +F+ M++ D+V W+++I G AQ GEEA+KLF R+
Sbjct: 473 LDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARL 532
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAG 526
R SG+ PN T V ++T S + + G Q + +I++ G + ++D+ A+ G
Sbjct: 533 RVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKA--GADSDPHISNALIDMYAKCG 590
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ E + + D++ W S++++ HG+ +
Sbjct: 591 FIEEGR-LLFESTLGKDVICWNSMISTYAQHGHAE 624
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 231/508 (45%), Gaps = 72/508 (14%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+S + R ++ H + S PD L N +L Y K G L DAR +FD MP RN
Sbjct: 36 LLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRN 95
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM------PDQFTFGSIIRACSGLCCVGL 199
+VSW + I+ +Q+G+E+ A+ L+ +G P++F S +RAC+
Sbjct: 96 LVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARF 155
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+H K +++ AL+ +Y K RI A +VF ++ ++ +W ++I G+S+
Sbjct: 156 GEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQ 215
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A A+ LF MG + PD + S A
Sbjct: 216 ----------------------------AGQAGVALELFGRMGLDGVRPDRFVLASAASA 247
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELF---RLFSLM----LASQ 370
C+ + G QIH Y + S+ V NA+ L + L RLF M L S
Sbjct: 248 CSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSW 307
Query: 371 T---------------------------KPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
T +PD ++ +C ++A++ G Q+H +++K
Sbjct: 308 TTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIK 367
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
L D +V N L+DMY KC L AR +F + + D +S++++I GYA+ G A+++
Sbjct: 368 ADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEI 427
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F +MR ++P+ +T V +L S +E Q++ ++ G S ++D+ +
Sbjct: 428 FGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKS-GTSLDLYAGSALIDVYS 486
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+ V +A+ + M + D+V+W +++
Sbjct: 487 KFSLVDDAKLVFSLMQ-NRDMVIWNAMI 513
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ + ACA + G Q+H K GL +VFV L+++Y K G + +A +
Sbjct: 135 PNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSV 194
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ + + V+W+++I GY+Q G AL+LF RM GVRP+ L +ACS +G V
Sbjct: 195 FDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFV 254
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVV----DLLARAGRVHEAEDFINQMAFDDDIVVWK 548
E G Q++ Y E + VV DL + R+ A + M + ++V W
Sbjct: 255 EGGRQIH-----GYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSME-NRNLVSWT 308
Query: 549 SLLA 552
+++A
Sbjct: 309 TMIA 312
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 305/591 (51%), Gaps = 68/591 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T ++ CSSL +Q G +H ++ + + + + +++MY KC + +A +F
Sbjct: 164 TLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL 223
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E ++N V WTAM+ G +QNG A+E + M G+ +Q+TF +I+ ACS +
Sbjct: 224 EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCF 283
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+H ++KS GS++ Q+AL+ MY K + +A N+ +
Sbjct: 284 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLET------------------ 325
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
ME ++ SWN+++ G EA+ LF M R + D T S+L
Sbjct: 326 ----------MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNC 375
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------------------- 357
C + +H IIK GF + V NA++ A
Sbjct: 376 CV--VGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISW 433
Query: 358 --------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E ++F M + PD ++ ACA + LE G Q+H +K
Sbjct: 434 TSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIK 493
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+GL V N L+ MY KCG L A +F M+ DV++W+++IVGYAQ G G +LK
Sbjct: 494 SGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKF 553
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
+ M SSG RP+ +T +G+L ACSH GLV+EG + ++ M YGI P E +C++DL
Sbjct: 554 YDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFG 613
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
R+G++ EA+ ++QM D VWKSLL++C+ H N+++ +RAA N+ +++P N+ V+
Sbjct: 614 RSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVM 673
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGNDISGN 634
L N+Y++S KW +VA++ MK +G+ K PG SW+EI ++++ +D G+
Sbjct: 674 LSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGH 724
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 153/592 (25%), Positives = 249/592 (42%), Gaps = 138/592 (23%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA----------------GCS----- 157
N +LN K G + DAR +FD+MPQ++ SW MI+ GCS
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 158 ----------QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+ G + A +L+ M G QFT GS++R CS L + G +H V
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+K+ ++ L+ MY K + +A +F +
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL------------------------- 223
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
E + N W ++ G A + +A+ F M + + + T ++L AC+S L+
Sbjct: 224 -EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARC 282
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------------------------ 357
G Q+H +I+K GF SNV V +A++ A
Sbjct: 283 FGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFV 342
Query: 358 ------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
E RLF M K D TF V+ C + S+ + +H I+KTG
Sbjct: 343 RHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN-CCVVGSINPKS-VHGLIIKTGFENYKL 400
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+DMY K G + A +F M + DV+SW+SL+ GYAQ EE+LK+F MR +G
Sbjct: 401 VSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG 460
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
V P+ + +L+AC+ + L+E G Q++ G+ ++ + +V + A+ G + +A
Sbjct: 461 VNPDQFIVASILSACAELTLLEFGKQVHLDFIKS-GLRWSQSVYNSLVAMYAKCGCLDDA 519
Query: 532 E---------DFI----------------NQMAFDD---------DIVVWKSLLASCKTH 557
+ D I N + F D D + + LL +C
Sbjct: 520 DAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHA 579
Query: 558 GNVDVGKRAAENI-----LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
G VD G++ + + +K P + A ++ +++ SGK +E +L+ M
Sbjct: 580 GLVDEGRKYFQQMNKVYGIKPGPEHYACMI---DLFGRSGKLDEAKQLLDQM 628
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 179/397 (45%), Gaps = 63/397 (15%)
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDF 262
H + + N L+ +K ++ DA +F + +KD SW +MI + +L
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR +F+ + +W++II+G EA LF M T+ S+L C+S
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------------- 361
+ G IH +++K GF NV V ++ +A LF+
Sbjct: 175 LGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234
Query: 362 -----------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
F M A + + TF ++ AC+++ + G Q+H +I+K+
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS 294
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G +V+V + L+DMY KCG L +A+ + MED DVVSW+SL+VG+ + G EEAL+LF
Sbjct: 295 GFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLF 354
Query: 465 RRMRSSGVRPNHVTLVGVLTAC---------SHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+ M ++ + T VL C H +++ G + Y+++ N
Sbjct: 355 KNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSN----------- 403
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+VD+ A+ G + A +M + D++ W SL+
Sbjct: 404 -ALVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLVT 438
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 36/191 (18%)
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI--------------------- 448
++ N L++ K G + AR+LF+ M D SW+++I
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 449 ----------VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
GY +FGC EA LFR MR G + + TL VL CS +GL++ G +
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTH 557
+ + G + +VD+ A+ V EAE + FD + V+W +++ +
Sbjct: 185 HGFVVKN-GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQN 243
Query: 558 GNVDVGKRAAE 568
G+ G +A E
Sbjct: 244 GD---GYKAVE 251
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 210/672 (31%), Positives = 332/672 (49%), Gaps = 89/672 (13%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S+L + +AL + + + F T A ++SAC +L ++ GR+ H +
Sbjct: 108 LISALTRNGFEQKALGVY-YRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKI 166
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N +L MY KC + DA F ++P+ N VS+TAM+ G + + Q N A L+
Sbjct: 167 GLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLF 226
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCC--VGL------------GRQLHAHVIKSEHGSH 215
ML++ + D + S++ CS C GL G+Q+H IK S
Sbjct: 227 RLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESD 286
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---------------- 259
L N+L+ MY K + A +F ++ + SW MI G+ +
Sbjct: 287 LHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQY 346
Query: 260 ----------------------LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
++ R +F+ M SP+L+SWNTI++G + N EA+ L
Sbjct: 347 HGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKL 406
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----- 352
F EM R + PD T+ +L + + L G Q+H+ K F +++ + + ++
Sbjct: 407 FREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSK 466
Query: 353 -----------------------QHQAG--------ELFRLFSLMLASQTKPDHITFNDV 381
AG E F F M P ++ V
Sbjct: 467 CGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATV 526
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ CA ++SL G Q+H I + G D FV + L+DMY KCG + +AR +F+ M +
Sbjct: 527 LSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNT 586
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
V+W+ +I GYAQ GCG+EA+ L+ M SG +P+ +T V VLTACSH GLV+ G++++
Sbjct: 587 VTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNS 646
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
MQ E+G+ P + +C++D L RAGR+HEAE I++M D ++W+ LL+SC+ + +V
Sbjct: 647 MQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVS 706
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+ +RAAE + +DP NSA VLL NIY+S G+W++ + M V K PG SWIE +
Sbjct: 707 LARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHK 766
Query: 622 TKIHASGNDISG 633
+ A D +G
Sbjct: 767 NGMQAFMVDDNG 778
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 234/521 (44%), Gaps = 81/521 (15%)
Query: 81 STY-ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS--------- 130
+TY A L+ C ++ G+ +H H+L S+ D L N ++ Y KC +
Sbjct: 5 TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64
Query: 131 ----------------------LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
LEDA ++F EMP+RN+VSW +I+ ++NG E A+ +
Sbjct: 65 QMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGV 124
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
Y +M + G +P FT S++ AC L V GR+ H IK +++ NAL+ MY K
Sbjct: 125 YYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAK 184
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
I DA F + PN S+ ++ G+A
Sbjct: 185 CRCIGDAIQAFGDVPE----------------------------PNEVSFTAMMGGLADS 216
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACT----SPLSLY----------QGMQIHS 334
NEA LF M + D +++ S+L C+ L+ G Q+H
Sbjct: 217 DQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHC 276
Query: 335 YIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
IK GF S++ + N++L A G + ++ + + +++N ++ +
Sbjct: 277 LTIKHGFESDLHLNNSLLDMYAKNGNMDSA-EMIFVNMPEVSVVSWNVMIAGYGQKSQSS 335
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+ + G D ++ +K G + + R++F+ M P + SW++++ GY+
Sbjct: 336 KAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYS 395
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
Q +EA+KLFR M+ V P+ TL +L++ + + L+E G Q++ + Q + T
Sbjct: 396 QNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQK--AVFRTD 453
Query: 513 -ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S ++ + ++ G+V A+ +++A + DIV W S++A
Sbjct: 454 IYLASGLIGMYSKCGKVEMAKRIFDRIA-ELDIVCWNSMMA 493
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/580 (34%), Positives = 312/580 (53%), Gaps = 63/580 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++S + L L+LG+++H ++ S + N ++NMY K GS+ AR VF +M
Sbjct: 908 TFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ ++VSW MI+GC+ +G E ++ ++V +L+ GL+PDQFT S++RACS L
Sbjct: 968 NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGG----- 1022
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
G HL +Q AM K +LD+ F S D+ S K++
Sbjct: 1023 -----------GCHLATQIHACAM--KAGVVLDS---FVSTTLIDVYSKSG------KME 1060
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A +F + +LASWN ++ G + +A+ L+ M + + +T+ + A
Sbjct: 1061 EAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAG 1120
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------- 353
+ L QG QI + ++K+GF ++ V + +L
Sbjct: 1121 GLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTT 1180
Query: 354 ------HQAGELFRLFSL--MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E LF+ M S+ +PD TF ++ AC+ + +LE G Q+H +K
Sbjct: 1181 MISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLN 1240
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
A D FVM L+DMY KCG++ AR LF + SW+++IVG AQ G EEAL+ F
Sbjct: 1241 CAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFE 1300
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M+S GV P+ VT +GVL+ACSH GLV E + + MQ YGI P E SC+VD L+RA
Sbjct: 1301 EMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRA 1360
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
GR+ EAE I+ M F+ ++++LL +C+ + + GKR AE +L ++P++SAA VLL
Sbjct: 1361 GRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLS 1420
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+YA++ +WE VA M++ V+K PG SW++++ K+H
Sbjct: 1421 NVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVH 1460
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 146/568 (25%), Positives = 245/568 (43%), Gaps = 91/568 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T A + C S +H + + Q D + ++N+Y K G + +AR++FD M
Sbjct: 729 TLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGM 788
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV--GL 199
R+VV W M+ G E A+ L+ + ++GL PD T ++ R V
Sbjct: 789 GLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQ 848
Query: 200 GRQLHAHVIK------SEHGSHLISQNALIAMYTKFDRILDAWNVF-------------- 239
+QL A+ K + GS +I+ N ++ + + +A + F
Sbjct: 849 LKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLT 908
Query: 240 -----SSIARKDITSWGSMIDGF---SKLD--------------------FARTVFNEME 271
S +A + G I G S LD ARTVF +M
Sbjct: 909 FVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN 968
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS-PLSLYQGM 330
+L SWNT+I+G A ++ +F ++ L+PD TV S+L AC+S +
Sbjct: 969 EVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLAT 1028
Query: 331 QIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF---------------------- 360
QIH+ +K G + V ++ +A LF
Sbjct: 1029 QIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSG 1088
Query: 361 ------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
RL+ LM S + + IT + A + L+ G Q+ ++K G LD+FV++
Sbjct: 1089 DFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVIS 1148
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
G++DMY+KCG + SAR +FN + PD V+W+++I G + G E AL + MR S V+P
Sbjct: 1149 GVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQP 1208
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+ T ++ ACS + +E+G Q++ ++ P + +VD+ A+ G + +A
Sbjct: 1209 DEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPF--VMTSLVDMYAKCGNIEDARG 1266
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ I W +++ HGN +
Sbjct: 1267 LFKRTN-TSRIASWNAMIVGLAQHGNAE 1293
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 238/516 (46%), Gaps = 56/516 (10%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ--RNVVSWTAMI 153
L LG++ H IL+S PD L N+++ MY KCGSL AR +FD P R++V+W A++
Sbjct: 642 LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+ + ++ L+ + +S + + T + + C LH + +K
Sbjct: 702 SAHADKARD--GFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQ 759
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ AL+ +Y KF RI +A R +F+ M
Sbjct: 760 WDVFVAGALVNIYAKFGRIREA----------------------------RVLFDGMGLR 791
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL--YQGMQ 331
++ WN ++ EA+ LFSE L PD +T+ +L S ++ +Q Q
Sbjct: 792 DVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQ 851
Query: 332 IHSYIIKKGFY------SNVPVCNAILQH--QAGELFRL---FSLMLASQTKPDHITFND 380
+ +Y K Y S+V N L Q GE + F M+ S+ D +TF
Sbjct: 852 LKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVV 911
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ A + LE+G Q+H ++++GL V V N L++MYVK GS+ AR +F M + D
Sbjct: 912 MLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVD 971
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+VSW+++I G A G E ++ +F + G+ P+ T+ VL ACS +G G L
Sbjct: 972 LVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG---GGCHLAT 1028
Query: 501 IMQN---EYGIIPTRERRSCVVDLLARAGRVHEAED-FINQMAFDDDIVVWKSLLASCKT 556
+ + G++ + ++D+ +++G++ EAE F+NQ F D+ W +++
Sbjct: 1029 QIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGF--DLASWNAMMHGYIV 1086
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
G D K IL + A + L N ++G
Sbjct: 1087 SG--DFPKALRLYILMQESGERANQITLANAAKAAG 1120
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 36/274 (13%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L + R T A+ A L L+ G+++ ++ D + + +L+MY KCG
Sbjct: 1099 LMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCG 1158
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
+E AR +F+E+P + V+WT MI+GC +NGQE A+ Y M S + PD++TF ++++
Sbjct: 1159 EMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVK 1218
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
ACS L + GRQ+HA+ +K +L+ MY K I DA
Sbjct: 1219 ACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDA-------------- 1264
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
R +F + +ASWN +I G+A NA EA+ F EM R + PD
Sbjct: 1265 --------------RGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPD 1310
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
+T +L AC+ + G+ +Y + FYS
Sbjct: 1311 RVTFIGVLSACS-----HSGLVSEAY---ENFYS 1336
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP--DVVSW 444
A + L +G + H I+ +G D F+ N L+ MY KCGSL SAR+LF+ D D+V+W
Sbjct: 638 AASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTW 697
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC--SHVGLVEEGLQLYRIM 502
++++ +A + LFR +R S V TL V C S E L Y +
Sbjct: 698 NAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAV- 754
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ G+ +V++ A+ GR+ EA + M D+V+W ++ +
Sbjct: 755 --KIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGL-RDVVLWNVMMKA 802
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 306/582 (52%), Gaps = 64/582 (10%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T A L+ ACSS +L G+++H + + + +LN+Y KC +E A F E
Sbjct: 373 NTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLE 432
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
NVV W M+ + ++ QM ++P+Q+T+ SI++ C L + LG
Sbjct: 433 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 492
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+H+ +IK+ + + LI MY K ++ AW++ A KD+ S
Sbjct: 493 EQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS----------- 541
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
W T+IAG + ++A++ F +M DR + D + + + + AC
Sbjct: 542 -----------------WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 584
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QHQAG------ 357
+L +G QIH+ GF S++P NA++ Q +AG
Sbjct: 585 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWN 644
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E R+F+ M ++ TF + A + A+++ G Q+H I KT
Sbjct: 645 ALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKT 704
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + V N ++ MY KCGS+ A++ F + + VSW+++I Y++ G G EAL F
Sbjct: 705 GYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSF 764
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M S VRPNHVTLVGVL+ACSH+GLV++G++ + M EYG+ P E CVVD+L R
Sbjct: 765 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTR 824
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + A+DFI +M + D +VW++LL++C H N+++G+ AA ++L+++P +SA VLL
Sbjct: 825 AGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 884
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N+YA KW+ MKE+GV+K PGQSWIE++ IH+
Sbjct: 885 SNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 926
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 161/589 (27%), Positives = 273/589 (46%), Gaps = 71/589 (12%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A +V D R W+ + L ++L + F + N N T++ ++
Sbjct: 119 LDGALKVFDEMPERTIFTWN-KMIKELASRSLSGKVFCLFGRMVNE-NVTPNEGTFSGVL 176
Query: 88 SACSSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
AC + + ++H I+ ++ N ++++Y + G ++ AR VFD + ++
Sbjct: 177 EACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDH 236
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
SW AMI+G S+N E AI L+ M G+MP + F S++ AC + + +G QLH
Sbjct: 237 SSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 296
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
V+K S NAL+++Y ++ A ++FS+++++D +
Sbjct: 297 VLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVT----------------- 339
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
+NT+I G++ C +AM LF M L PD T+ SL+ AC+S +L
Sbjct: 340 -----------YNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTL 388
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------------ 356
+ G Q+H+Y K GF SN + A+L A
Sbjct: 389 FSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY 448
Query: 357 GEL------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
G L FR+F M + P+ T+ ++ C + LE+G Q+H I+KT L+
Sbjct: 449 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNA 508
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+V + L+DMY K G L +A ++ DVVSW+++I GY Q+ ++AL FR+M
Sbjct: 509 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 568
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G+R + V L ++AC+ + ++EG Q++ G ++ +V L ++ G + E
Sbjct: 569 GIRSDEVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALVTLYSKCGNIEE 627
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR--AAENILKIDPTN 577
A Q D+I W +L++ + GN + R A N ID N
Sbjct: 628 AYLAFEQTEAGDNI-AWNALVSGFQQSGNNEEALRVFARMNREGIDSNN 675
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/582 (25%), Positives = 255/582 (43%), Gaps = 72/582 (12%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C D + +D+A V D + W + S L K EA+ F +
Sbjct: 208 CNPLIDLYSRNGFVDRARRVFDGLYLKDHSSW-VAMISGLSKNECEVEAIRLF---CDMY 263
Query: 75 NFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
I P+ YA ++SAC + SL++G ++H +L D + N ++++Y GSL
Sbjct: 264 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLI 323
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
A +F M QR+ V++ +I G SQ G A+EL+ +M GL PD T S++ ACS
Sbjct: 324 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACS 383
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ G+QLHA+ K S+ + AL+ +Y K I A N F +++ W
Sbjct: 384 SDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNV 443
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
M+ + LD R F +F +M E++P+ T
Sbjct: 444 MLVAYGLLDDLRNSFR----------------------------IFRQMQIEEIVPNQYT 475
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL----------- 359
S+L C L G QIHS IIK F N VC+ ++ A G+L
Sbjct: 476 YPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 535
Query: 360 -----------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
F ML + D + + + ACA + +L+ G Q
Sbjct: 536 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 595
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H +G + D+ N L+ +Y KCG++ A F E D ++W++L+ G+ Q G
Sbjct: 596 IHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGN 655
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
EEAL++F RM G+ N+ T + A S +++G Q++ ++ + G E +
Sbjct: 656 NEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCN 714
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ + A+ G + +A+ +++ ++ V W +++ + HG
Sbjct: 715 AIISMYAKCGSISDAKKQFLELSMKNE-VSWNAMINAYSKHG 755
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 228/519 (43%), Gaps = 72/519 (13%)
Query: 75 NFRIRPS--TYADLISACSSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
N IRP+ T L+ C SL GRK+H IL +A L +L+ Y G L
Sbjct: 60 NCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDL 119
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ A VFDEMP+R + +W MI + L+ +M+ + P++ TF ++ AC
Sbjct: 120 DGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEAC 179
Query: 192 -SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
G + Q+HA +I G I N LI +Y++ + A VF + KD +SW
Sbjct: 180 RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSW 239
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+MI G SK NE E EA+ LF +M ++P
Sbjct: 240 VAMISGLSK--------NECEV--------------------EAIRLFCDMYVLGIMPTP 271
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELF-------- 360
S+L AC SL G Q+H ++K GF S+ VCNA+ L G L
Sbjct: 272 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSN 331
Query: 361 --------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
LF M +PD T ++ AC++ +L G
Sbjct: 332 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSG 391
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
QLH Y K G A + + L+++Y KC + +A F E +VV W+ ++V Y
Sbjct: 392 QQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLL 451
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRE 513
+ ++FR+M+ + PN T +L C +G +E G Q++ +I++ + +
Sbjct: 452 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL--NAY 509
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S ++D+ A+ G++ A D + + A D+V W +++A
Sbjct: 510 VCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIA 547
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 192/440 (43%), Gaps = 78/440 (17%)
Query: 59 LYNEALVAFDFLQNNTN-FRI-----------RPSTYADLISACSSLRSLQLGRKVHDHI 106
L+N LVA+ L + N FRI TY ++ C L L+LG ++H I
Sbjct: 440 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 499
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ + Q +A + + +++MY K G L+ A + ++VVSWT MIAG +Q ++ A+
Sbjct: 500 IKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 559
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ QML G+ D+ + + AC+GL + G+Q+HA S S L QNAL+ +Y
Sbjct: 560 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 619
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
+K I +A+ F D N+A WN +++G
Sbjct: 620 SKCGNIEEAYLAFEQTEAGD---------------------------NIA-WNALVSGFQ 651
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
N EA+ +F+ M + + T S + A + ++ QG Q+H+ I K G+ S
Sbjct: 652 QSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 711
Query: 347 VCNAIL-----------------------------------QHQAG-ELFRLFSLMLASQ 370
VCNAI+ +H G E F M+ S
Sbjct: 712 VCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSN 771
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+P+H+T V+ AC+ + ++ G + + GLA ++DM + G L A
Sbjct: 772 VRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRA 831
Query: 430 RELFNFME-DPDVVSWSSLI 448
++ M +PD + W +L+
Sbjct: 832 KDFILEMPIEPDALVWRTLL 851
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 79/420 (18%)
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
LD A VF+EM + +WN +I +AS S + + LF M + + P+ T +L A
Sbjct: 119 LDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEA 178
Query: 320 CTSPLSLYQGM-QIHSYIIKKGFYSNVPVCNAI--LQHQAG------------------- 357
C + + QIH+ II +G + VCN + L + G
Sbjct: 179 CRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS 238
Query: 358 ---------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
E RLF M P F+ V+ AC + SLE+G QLH ++
Sbjct: 239 WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 298
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K G + D +V N L+ +Y GSL SA +F+ M D V++++LI G +Q G GE+A++
Sbjct: 299 KLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 358
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF+RM+ G+ P+ TL ++ ACS G + G QL+ + G + +++L
Sbjct: 359 LFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLH-AYTTKLGFASNDKIEGALLNLY 417
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWK---------------------------------- 548
A+ + A ++ + +++V+W
Sbjct: 418 AKCSDIETALNYFLETEV-ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 476
Query: 549 -SLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGK----WEEVARLMG 602
S+L +C G++++G++ I+K N+ +L ++YA GK W+ + R G
Sbjct: 477 PSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 536
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 172/370 (46%), Gaps = 33/370 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A +++ F + W + + + N ++AL F + + R + +
Sbjct: 524 LDTAWDILIRFAGKDVVSWT-TMIAGYTQYNFDDKALTTFRQMLDR-GIRSDEVGLTNAV 581
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ L++L+ G+++H S D N ++ +Y KCG++E+A + F++ + +
Sbjct: 582 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNI 641
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W A+++G Q+G A+ ++ +M + G+ + FTFGS ++A S + G+Q+HA +
Sbjct: 642 AWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVI 701
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
K+ + S NA+I+MY K I DA + F
Sbjct: 702 TKTGYDSETEVCNAIISMYAKCGSISDA----------------------------KKQF 733
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
E+ N SWN +I + +EA+ F +M + P+ +T+ +L AC+ +
Sbjct: 734 LELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 793
Query: 328 QGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G++ + + + P VC + +AG L R +L +PD + + ++ A
Sbjct: 794 KGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSA 853
Query: 385 CAAMASLEMG 394
C ++E+G
Sbjct: 854 CVVHKNMEIG 863
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 319/594 (53%), Gaps = 52/594 (8%)
Query: 80 PSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P TY L++A + L L R++ D + P+ N +L+ L D +
Sbjct: 43 PPTYVLNHLLTAYARSGRLPLARRLFD----AMPDPNLFTRNALLSALAHARLLPDMDRL 98
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-------SGLMPDQFTFGSIIRA 190
F MPQR+ VS+ A+IAG S G A Y +L+ + + P + T ++ A
Sbjct: 99 FASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMA 158
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
S L LGRQ+H +++ G++ + + L+ MY K I DA VF + K++ +
Sbjct: 159 ASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMY 218
Query: 251 GSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+MI G + ++ AR VF M + +W T++ G+ +EA+ +F M +
Sbjct: 219 NTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVG 278
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------- 352
D T S+L AC + + +G QIH+Y I+ + N+ V +A++
Sbjct: 279 IDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAV 338
Query: 353 --------------------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
Q+ GE R+FS M KP+ T V+ +CA +ASL
Sbjct: 339 FRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASL 398
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E G Q HC + +GL + V + L+ +Y KCGS+ A LF+ M D VS+++L+ GY
Sbjct: 399 EEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGY 458
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
AQFG +E + LF +M GV+PN VT +GVL+ACS GLVE+G + MQ ++GI+
Sbjct: 459 AQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLL 518
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
+ +C++DL +R+GR+ EAE+FI QM D + W +LL++C+ G++++GK AAEN+L
Sbjct: 519 DDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLL 578
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
K DP N A+ VLLC+++AS G+W EVA L M++R V+K PG SWI+ + ++H
Sbjct: 579 KTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVH 632
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 192/443 (43%), Gaps = 99/443 (22%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
R+RPS T + ++ A S+L LGR+VH I+ A + +++MY K G + DA
Sbjct: 144 RVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDA 203
Query: 135 RMVFDEMPQRNVV-------------------------------SWTAMIAGCSQNGQEN 163
+ VFDEM +NVV +WT M+ G +QNG ++
Sbjct: 204 KRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQS 263
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A++++ +M G+ DQ+TFGSI+ AC L G+Q+HA+ I++ + ++ +AL+
Sbjct: 264 EALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALV 323
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MY+K I A VF + K+I SW +MI G+
Sbjct: 324 DMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGY-------------------------- 357
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G C EA+ +FSEM + P+ T+ S++ +C + SL +G Q H + G
Sbjct: 358 GQNGC--GEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRP 415
Query: 344 NVPVCNAILQ------------------------------------HQAGELFRLFSLML 367
+ V +A++ +A E LF ML
Sbjct: 416 YITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKML 475
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
KP+ +TF V+ AC+ +E G + H G+ L ++D+Y + G L
Sbjct: 476 LKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRL 535
Query: 427 GSARELFNFMED-PDVVSWSSLI 448
A E M PD + W++L+
Sbjct: 536 KEAEEFIRQMPRCPDAIGWATLL 558
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 176/387 (45%), Gaps = 41/387 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C ++++A V ++ + R W + + L + L +EAL F ++ I T+
Sbjct: 228 CKMVEEARGVFEAMVDRDSITWT-TMVTGLTQNGLQSEALDVFRRMRAE-GVGIDQYTFG 285
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC +L + + G+++H + + + + + + +++MY KC S+ A VF M +
Sbjct: 286 SILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCK 345
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N++SWTAMI G QNG A+ ++ +M G+ P+ FT GS+I +C+ L + G Q H
Sbjct: 346 NIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFH 405
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ S ++ +AL+ +Y K I DA +F
Sbjct: 406 CMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLF------------------------- 440
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+EM + S+ +++G A A E + LF +M + + P+G+T +L AC+
Sbjct: 441 ---DEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSG 497
Query: 325 SLYQG-------MQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
+ +G Q H ++ Y+ C L ++G L + PD I
Sbjct: 498 LVEKGCSYFHSMQQDHGIVLLDDHYT----CMIDLYSRSGRLKEAEEFIRQMPRCPDAIG 553
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKT 404
+ ++ AC +E+G ++KT
Sbjct: 554 WATLLSACRLRGDMEIGKWAAENLLKT 580
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 188/585 (32%), Positives = 303/585 (51%), Gaps = 66/585 (11%)
Query: 79 RPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP Y +I AC L++LQ+GR +H + D + +++MY KC +EDAR
Sbjct: 27 RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF 86
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+FD+M +R++V+WT MI G ++ G+ N ++ L+ +M + G++PD+ +++ AC+ L
Sbjct: 87 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 146
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ R + ++ + + +I A+I MY K +
Sbjct: 147 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV------------------------ 182
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+ AR +F+ ME N+ SW+ +IA +A+ LF M ++PD +T+ SL
Sbjct: 183 ----ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH---------------------- 354
L AC+ +L G IH + K G + VC A++
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298
Query: 355 --------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
A E LF M PD + V+ ACA + ++ + Y
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
I + LDV + ++DM+ KCG + SARE+F+ ME+ +V+SWS++I Y G G +A
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L LF M SG+ PN +TLV +L ACSH GLVEEGL+ + +M +Y + + +CVVD
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL RAGR+ EA I M + D +W + L +C+TH +V + ++AA ++L++ P N
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGH 538
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+LL NIYA++G+WE+VA+ M +R ++K+PG +WIE+ K H
Sbjct: 539 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSH 583
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 215/451 (47%), Gaps = 69/451 (15%)
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
M+ G ++ G + ++++ G PD +T +IRAC L + +GR +H V K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEME 271
AL+ MY K I DA R +F++M+
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDA----------------------------RFLFDKMQ 92
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
+L +W +I G A C ANE++ LF +M + ++PD + + +++ AC ++++
Sbjct: 93 ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARI 152
Query: 332 IHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---------------------- 361
I YI +K F +V + A++ A E+F
Sbjct: 153 IDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ 212
Query: 362 ------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
LF +ML+S PD IT ++ AC+ + +L+MG +H + K GL LD FV
Sbjct: 213 GRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAA 272
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+DMY KC + AR LF+ M + D+V+W+ +I GYA+ G E+L LF +MR GV P+
Sbjct: 273 LVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPD 332
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
V +V V+ AC+ +G + + + +Q + + + ++D+ A+ G V A +
Sbjct: 333 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI-LGTAMIDMHAKCGCVESAREIF 391
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
++M + +++ W +++A+ HG G++A
Sbjct: 392 DRME-EKNVISWSAMIAAYGYHGQ---GRKA 418
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 170/371 (45%), Gaps = 37/371 (9%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A E+ D + W + + + + A D + + +
Sbjct: 174 DMYAKCGCVESAREIFDRMEEKNVISWS----AMIAAYGYHGQGRKALDLFRMMLSSGML 229
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T A L+ ACS L++LQ+GR +H + D + +++MYGKC +EDAR +
Sbjct: 230 PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 289
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD+MP+R++V+WT MI G ++ G N ++ L+ +M + G++PD+ +++ AC+ L +
Sbjct: 290 FDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 349
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
R + ++ + + +I A+I M+ K + A +F + K++ SW +M
Sbjct: 350 HKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAM---- 405
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
IA +A+ LF M ++P+ +T+ SLL
Sbjct: 406 ------------------------IAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLL 441
Query: 318 CACTSPLSLYQGMQIHSYIIKK-GFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPD 374
AC+ + +G++ S + + ++V C L +AG L L+ + + D
Sbjct: 442 YACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKD 501
Query: 375 HITFNDVMGAC 385
+ +GAC
Sbjct: 502 EGLWGAFLGAC 512
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 197/623 (31%), Positives = 314/623 (50%), Gaps = 96/623 (15%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ TY+ ++ C+ +SL G+KVH I S+ D VL ++++Y CG L++ R V
Sbjct: 97 LETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRV 156
Query: 138 FDEMPQRNV--------------------------------------------------- 146
FD M ++NV
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDV 216
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW +MI+G NG +E+Y QM+ G+ D T S++ C+ + LG+ +H+
Sbjct: 217 ISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
IKS + N L+ MY+K LD A V
Sbjct: 277 AIKSTFERRINFSNTLLDMYSKC----------------------------GDLDGALRV 308
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F +M N+ SW ++IAG ++ A+ L +M + D + S+L AC SL
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSL 368
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL---FRLFSLMLAS----------QT 371
G +H YI SN+ VCNA++ + G + +FS M+ +
Sbjct: 369 DNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGEL 428
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
KPD T ++ ACA++++LE G ++H YI++ G + D V N L+D+YVKCG LG AR
Sbjct: 429 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
LF+ + D+VSW+ +I GY G G EA+ F MR +G+ P+ V+ + +L ACSH GL
Sbjct: 489 LFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+E+G + + IM+N++ I P E +C+VDLL+R G + +A +FI + D +W +LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
C+ + ++++ ++ AE + +++P N+ VLL NIYA + KWEEV R+ + ++G+RK
Sbjct: 609 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRK 668
Query: 612 VPGQSWIEIQTKIH--ASGNDIS 632
PG SWIEI+ K++ SGN+ S
Sbjct: 669 NPGCSWIEIKGKVNLFVSGNNSS 691
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 130/256 (50%), Gaps = 13/256 (5%)
Query: 63 ALVAFDFLQNNTNF-RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+V D + NT ++P T A ++ AC+SL +L+ G+++H +IL + D + N
Sbjct: 412 TMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 471
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++++Y KCG L AR++FD +P +++VSWT MI+G +G N AI + +M +G+ P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEP 531
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWN 237
D+ +F SI+ ACS + G + +++K++ L ++ + ++ + A+
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 238 VFSSIA-RKDITSWGSMIDG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASCSN 290
++ D T WG+++ G + ++ A V E+E N + + A
Sbjct: 591 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 291 ANEAMSLFSEMGDREL 306
E + ++G + L
Sbjct: 651 WEEVKRMREKIGKKGL 666
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 141/360 (39%), Gaps = 100/360 (27%)
Query: 320 CTSPLSLYQ-----------GMQIHSYIIKKGFYSNV-----PV---------------- 347
C SPL+L Q G IH K F+S + P+
Sbjct: 9 CFSPLTLNQNRKENFFSSQNGCFIHKPTSKATFFSPIFSSCLPIRISATPTRTIDRQVTD 68
Query: 348 CNAILQH--QAGELFRLFSLM-LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
NA + H Q G L L+ + +++ + T++ V+ CA SL G ++H I
Sbjct: 69 YNAKILHFCQLGNLENAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSN 128
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFME--------------------------- 437
+A+D + L+ +Y CG L R +F+ ME
Sbjct: 129 NVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF 188
Query: 438 ------------------------DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
D DV+SW+S+I GY G E L+++++M G+
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGID 248
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR----SCVVDLLARAGRVH 529
+ T++ VL C++ G + G ++ + I T ERR + ++D+ ++ G +
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSL-----AIKSTFERRINFSNTLLDMYSKCGDLD 303
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI----LKIDPTNSAALVLLC 585
A +M + ++V W S++A G D R + + +K+D + +++ C
Sbjct: 304 GALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHAC 362
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 302/530 (56%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + + N++ W M G + + +A+ LYV M+ GL+P+ +TF ++++C+
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 118
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K + L +LI+MY + R+ DA VF + +D+ S+ ++I G
Sbjct: 119 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 178
Query: 257 FSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ + A+ +F+E+ ++ SWN +I+G A N EA+ LF EM + PD T+
Sbjct: 179 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 238
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGE------LFR---- 361
S++ AC S+ G Q+HS+I GF SN+ + NA+ L + GE LF
Sbjct: 239 VSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY 298
Query: 362 ------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
LF ML S P+ +T ++ ACA + ++E+G +
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWI 358
Query: 398 HCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G+A L+DMY KCG + +A+++F+ + + + SW+++I G+A G
Sbjct: 359 HVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHG 418
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
A +F RMR + + P+ +T VG+L+ACSH G+++ G ++R M+ +Y I P E
Sbjct: 419 RANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHY 478
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL +G EAE+ IN M + D V+W SLL +CK + NV++G+ A+N++KI+P
Sbjct: 479 GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEP 538
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYA++G+W EVA++ + ++G++KVPG S IEI + +H
Sbjct: 539 KNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 588
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 198/423 (46%), Gaps = 46/423 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ L+ +C+ ++ + G+++H H+L D +H +++MY + G LEDAR VFD
Sbjct: 105 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 164
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G ++ G A+EL+
Sbjct: 165 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 224
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M+++ + PD+ T S++ AC+ + LGRQ+H+ + GS+L NALI +Y K
Sbjct: 225 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIA 283
+ A +F ++ KD+ SW ++I G++ ++ A +F EM ESPN + +I+
Sbjct: 285 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 344
Query: 284 GVASCSNANEAMSLFSEMGDR-ELIPDGLTVR-SLLCACTSPLSLYQGMQIHSYIIKKGF 341
A + + R + + + + R SL+ + Q+ I+ +
Sbjct: 345 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 404
Query: 342 YS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
S N + + +A F +FS M ++ +PD ITF ++ AC+ L++G +
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 401 IMKTGLALDVFVMNGLM-DMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG---YAQFG 455
+ + G M D+ G A E+ N ME +PD V W SL+ YA
Sbjct: 465 MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVE 524
Query: 456 CGE 458
GE
Sbjct: 525 LGE 527
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 40/342 (11%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
EAL F + TN R ST ++SAC+ S++LGR+VH I + + N
Sbjct: 217 KEALELFKEMMK-TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNA 275
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++++Y KCG +E A +F+ + ++V+SW +I G + A+ L+ +ML+SG P+
Sbjct: 276 LIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPN 335
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS--QNALIAMYTKFDRILDAWNV 238
T SI+ AC+ L + +GR +H ++ K G S + +LI MY K I A V
Sbjct: 336 DVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQV 395
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F SI + ++SW +MI GF A AN A +F
Sbjct: 396 FDSILNRSLSSWNAMIFGF----------------------------AMHGRANAAFDIF 427
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQ 353
S M E+ PD +T LL AC+ L G I + K Y P C L
Sbjct: 428 SRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM--KEDYKITPKLEHYGCMIDLL 485
Query: 354 HQAGELFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMG 394
+G LF+ M+ + + +PD + + ++ AC A++E+G
Sbjct: 486 GHSG-LFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELG 526
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 15/236 (6%)
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV---KCGSLGSARELFNFMEDPDV 441
C + SL M +H ++KTGL + ++ L++ V L A +F +++P++
Sbjct: 12 CKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNL 68
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-R 500
+ W+++ G+A AL L+ M S G+ PN T +L +C+ EG Q++
Sbjct: 69 LIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGH 128
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+++ Y + + ++ + + GR+ +A +Q + D+V + +L+ + G +
Sbjct: 129 VLKLGYDL--DLYVHTSLISMYVQNGRLEDARKVFDQSS-HRDVVSYTALITGYASKGYI 185
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
++ + I D + A++ + YA +G +E L M + VR P +S
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMI---SGYAETGNNKEALELFKEMMKTNVR--PDES 236
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V DS L R W+ +F ++ A AFD I
Sbjct: 381 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFA----MHGRANAAFDIFSRMRKNEIE 436
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSS-----KCQPDAVLHNHILNMYGKCGSLE 132
P T+ L+SACS L LGR HI S K P + ++++ G G +
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGR----HIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 133 DARMVFDEMP-QRNVVSWTAMIAGC 156
+A + + M + + V W +++ C
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKAC 517
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 197/601 (32%), Positives = 321/601 (53%), Gaps = 53/601 (8%)
Query: 67 FDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM-- 124
+ LQN+ + L+S C S ++L +++H I+ + + ++
Sbjct: 27 YKLLQNHPSLT--------LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCA 75
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
G+L A ++F+ + Q N W MI G S + AI+ YV+ML G+ P+ +TF
Sbjct: 76 ISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTF 135
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
++++C+ + G+Q+H HV+K S +LI MY + + A VFS +
Sbjct: 136 PFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSL 195
Query: 245 KDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+D S+ ++I G++ LD AR +F E+ + SWN +IAG A EA++ F EM
Sbjct: 196 RDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM 255
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------- 353
+ P+ T+ ++L AC SL G + S+I G SN+ + NA++
Sbjct: 256 KRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDL 315
Query: 354 HQAGELFR----------------------------LFSLMLASQTKPDHITFNDVMGAC 385
+A +LF LF M S +P+ +TF ++ AC
Sbjct: 316 DKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPAC 375
Query: 386 AAMASLEMGTQLHCYIMKTGLAL-DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
A + +L++G +H YI K L L + + L+DMY KCG++ +A+++F M+ + SW
Sbjct: 376 AYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW 435
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+++I G A G AL+LFR+MR G P+ +T VGVL+ACSH GLVE G Q + M
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE 495
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+Y I P + C++DLL RAG EAE + M D +W SLL +C+ HGNV++G+
Sbjct: 496 DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGE 555
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
AA+++ +++P N A VLL NIYA++G+W++VAR+ + ++G++KVPG S IE+ + +
Sbjct: 556 FAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVV 615
Query: 625 H 625
H
Sbjct: 616 H 616
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 171/373 (45%), Gaps = 38/373 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A + + R W+ + + + + EAL F ++ N ST ++
Sbjct: 214 LDDARRLFEEIPVRDAVSWN-AMIAGYAQSGRFEEALAFFQEMKR-ANVAPNESTMVTVL 271
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ SL+LG V I + L N +++MY KCG L+ AR +F+ + +++++
Sbjct: 272 SACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDII 331
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW MI G S A+ L+ +M QS + P+ TF SI+ AC+ L + LG+ +HA++
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391
Query: 208 IKSEHG-SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
K G ++ +LI MY K I A VF+ + K + SW
Sbjct: 392 DKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW---------------- 435
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
N +I+G+A +AN A+ LF +M D PD +T +L AC+ +
Sbjct: 436 ------------NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLV 483
Query: 327 YQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
G Q S +++ Y P C L +AG +LM + KPD + +
Sbjct: 484 ELGRQCFSSMVED--YDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSL 541
Query: 382 MGACAAMASLEMG 394
+GAC ++E+G
Sbjct: 542 LGACRVHGNVELG 554
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 319/582 (54%), Gaps = 64/582 (10%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSK-CQPDAVLHNHILNMYGK-CGSLEDARMVFDE 140
+A +I ACS+ +G ++ ++ + + D + +++M+ K G L A VFD+
Sbjct: 131 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 190
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RN+V+WT MI +Q G AI+L++ M SG +PD+FT+ S++ AC+ L + LG
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+QLH+ VI+ + +L+ MY K DG +
Sbjct: 251 KQLHSRVIRLGLALDVCVGCSLVDMYAK-----------------------CAADG--SV 285
Query: 261 DFARTVFNEMESPNLASWNTII-AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
D +R VF +M N+ SW II A V S EA+ LF +M + P+ + S+L A
Sbjct: 286 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 345
Query: 320 CTSPLSLYQGMQIHSYIIKKG-------------------------------FYSNVPVC 348
C + Y G Q++SY +K G F N+
Sbjct: 346 CGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY 405
Query: 349 NAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
NAI+ A E F LF+ + + TF ++ A++ ++ G Q+H ++K
Sbjct: 406 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 465
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G + + N L+ MY +CG++ +A ++FN MED +V+SW+S+I G+A+ G AL++
Sbjct: 466 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 525
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F +M +G +PN +T V VL+ACSHVG++ EG + + M E+GI+P E +C+VDLL
Sbjct: 526 FHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLG 585
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
R+G + EA +FIN M D +VW++LL +C+ HGN ++G+ AAE IL+ +P + AA +L
Sbjct: 586 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYIL 645
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N++AS+G+W++V ++ SMKER + K G SWIE++ ++H
Sbjct: 646 LSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 687
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 155/582 (26%), Positives = 278/582 (47%), Gaps = 91/582 (15%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+TY+ L+ +C R+ QLG+ VH ++ S + D+V+ N ++++Y KCG E AR++F+
Sbjct: 27 TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 86
Query: 141 MP-QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M +R++VSW+AM++ + N E AI ++ ML+ G P+++ F ++IRACS +
Sbjct: 87 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 146
Query: 200 GRQLHAHVIKSEH-GSHLISQNALIAMYTKFDRIL-DAWNVFSSIARKDITSWGSMIDGF 257
G ++ V+K+ + + + LI M+ K L A+ VF + +++ +W MI F
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
++L AR +A+ LF +M +PD T S+L
Sbjct: 207 AQLGCAR----------------------------DAIDLFLDMELSGYVPDRFTYSSVL 238
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPV----------CNA-------------ILQH 354
ACT L G Q+HS +I+ G +V V C A + +H
Sbjct: 239 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 298
Query: 355 -------------QAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
Q+G E LF M++ +P+H +F+ V+ AC ++ G Q+
Sbjct: 299 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 358
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
+ Y +K G+A V N L+ MY + G + AR+ F+ + + ++VS+++++ GYA+
Sbjct: 359 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 418
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRS 516
EEA LF + +G+ + T +L+ + +G + +G Q++ R+++ Y +
Sbjct: 419 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY------KSNQ 472
Query: 517 CV----VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
C+ + + +R G + A N+M D +++ W S++ HG RA E K
Sbjct: 473 CICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG---FATRALEMFHK 528
Query: 573 IDPT----NSAALVLLCNIYASSGKWEEVARLMGSM-KERGV 609
+ T N V + + + G E + SM KE G+
Sbjct: 529 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 570
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 193/423 (45%), Gaps = 73/423 (17%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M Q PD T+ ++++C LG+ +H +++S + N LI++Y+K
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 232 ILDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
A +F + ++D+ SW +M+ F+ N ME W
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFAN--------NSME------W------------ 110
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--------- 341
+A+ F +M + P+ +++ AC++ + G I+ +++K G+
Sbjct: 111 --QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGC 168
Query: 342 -------------------YSNVPVCNAILQHQ----------AGELFRLFSLMLASQTK 372
+ +P N + A + LF M S
Sbjct: 169 ELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV 228
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC---GSLGSA 429
PD T++ V+ AC + L +G QLH +++ GLALDV V L+DMY KC GS+ +
Sbjct: 229 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 288
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFG-CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
R++F M + +V+SW+++I Y Q G C +EA++LF +M S +RPNH + VL AC +
Sbjct: 289 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+ G Q+Y + GI + ++ + AR+GR+ +A + + F+ ++V +
Sbjct: 349 LSDPYTGEQVYSYAV-KLGIASVNCVGNSLISMYARSGRMEDARKAFD-ILFEKNLVSYN 406
Query: 549 SLL 551
+++
Sbjct: 407 AIV 409
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 157/324 (48%), Gaps = 37/324 (11%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
IRP+ +++ ++ AC +L G +V+ + + + N +++MY + G +EDAR
Sbjct: 332 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 391
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
FD + ++N+VS+ A++ G ++N + A L+ ++ +G+ FTF S++ + +
Sbjct: 392 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 451
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G G Q+H ++K + S+ NALI+MY++ I A+ VF+ + +++ SW SMI
Sbjct: 452 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 511
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
GF+K F A A+ +F +M + P+ +T +
Sbjct: 512 GFAKHGF----------------------------ATRALEMFHKMLETGTKPNEITYVA 543
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQ 370
+L AC+ + +G + + + K+ + VP C L ++G L + +
Sbjct: 544 VLSACSHVGMISEGQKHFNSMYKE--HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 601
Query: 371 TKPDHITFNDVMGACAAMASLEMG 394
D + + ++GAC + E+G
Sbjct: 602 LMADALVWRTLLGACRVHGNTELG 625
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EA + F+ + + T I T+A L+S +S+ ++ G ++H +L + + + N +
Sbjct: 420 EAFLLFNEIAD-TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 478
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++MY +CG++E A VF+EM RNV+SWT+MI G +++G A+E++ +ML++G P++
Sbjct: 479 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 538
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
T+ +++ ACS + + G Q H + + EHG
Sbjct: 539 ITYVAVLSACSHVGMISEG-QKHFNSMYKEHG 569
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 130/319 (40%), Gaps = 48/319 (15%)
Query: 353 QHQAGELFRLFS---LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
Q G L FS LM PD T++ ++ +C + ++G +H +M++GL LD
Sbjct: 1 QLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELD 60
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
V+N L+ +Y KCG +AR +F M + D+VSWS+++ +A +A+ F M
Sbjct: 61 SVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDML 120
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI--------------------------- 501
G PN V+ ACS+ G +Y
Sbjct: 121 ELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD 180
Query: 502 MQNEYGIIPTRERRSCV-----VDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLAS 553
+ + Y + R+ V + A+ G +A D M + D + S+L++
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240
Query: 554 CKTHGNVDVGKRAAENILK----IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
C G + +GK+ +++ +D +LV + A+ G ++ ++ M E V
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300
Query: 610 RKVPGQSWIEIQTKIHASG 628
SW I T SG
Sbjct: 301 -----MSWTAIITAYVQSG 314
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 319/582 (54%), Gaps = 64/582 (10%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSK-CQPDAVLHNHILNMYGK-CGSLEDARMVFDE 140
+A +I ACS+ +G ++ ++ + + D + +++M+ K G L A VFD+
Sbjct: 149 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 208
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RN+V+WT MI +Q G AI+L++ M SG +PD+FT+ S++ AC+ L + LG
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+QLH+ VI+ + +L+ MY K DG +
Sbjct: 269 KQLHSRVIRLGLALDVCVGCSLVDMYAK-----------------------CAADG--SV 303
Query: 261 DFARTVFNEMESPNLASWNTII-AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
D +R VF +M N+ SW II A V S EA+ LF +M + P+ + S+L A
Sbjct: 304 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 363
Query: 320 CTSPLSLYQGMQIHSYIIKKG-------------------------------FYSNVPVC 348
C + Y G Q++SY +K G F N+
Sbjct: 364 CGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY 423
Query: 349 NAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
NAI+ A E F LF+ + + TF ++ A++ ++ G Q+H ++K
Sbjct: 424 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 483
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G + + N L+ MY +CG++ +A ++FN MED +V+SW+S+I G+A+ G AL++
Sbjct: 484 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 543
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F +M +G +PN +T V VL+ACSHVG++ EG + + M E+GI+P E +C+VDLL
Sbjct: 544 FHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLG 603
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
R+G + EA +FIN M D +VW++LL +C+ HGN ++G+ AAE IL+ +P + AA +L
Sbjct: 604 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYIL 663
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N++AS+G+W++V ++ SMKER + K G SWIE++ ++H
Sbjct: 664 LSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 705
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 155/582 (26%), Positives = 278/582 (47%), Gaps = 91/582 (15%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+TY+ L+ +C R+ QLG+ VH ++ S + D+V+ N ++++Y KCG E AR++F+
Sbjct: 45 TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 104
Query: 141 MP-QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M +R++VSW+AM++ + N E AI ++ ML+ G P+++ F ++IRACS +
Sbjct: 105 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 164
Query: 200 GRQLHAHVIKSEH-GSHLISQNALIAMYTKFDRIL-DAWNVFSSIARKDITSWGSMIDGF 257
G ++ V+K+ + + + LI M+ K L A+ VF + +++ +W MI F
Sbjct: 165 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 224
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
++L AR +A+ LF +M +PD T S+L
Sbjct: 225 AQLGCAR----------------------------DAIDLFLDMELSGYVPDRFTYSSVL 256
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPV----------CNA-------------ILQH 354
ACT L G Q+HS +I+ G +V V C A + +H
Sbjct: 257 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 316
Query: 355 -------------QAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
Q+G E LF M++ +P+H +F+ V+ AC ++ G Q+
Sbjct: 317 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 376
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
+ Y +K G+A V N L+ MY + G + AR+ F+ + + ++VS+++++ GYA+
Sbjct: 377 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 436
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRS 516
EEA LF + +G+ + T +L+ + +G + +G Q++ R+++ Y +
Sbjct: 437 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY------KSNQ 490
Query: 517 CV----VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
C+ + + +R G + A N+M D +++ W S++ HG RA E K
Sbjct: 491 CICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG---FATRALEMFHK 546
Query: 573 IDPT----NSAALVLLCNIYASSGKWEEVARLMGSM-KERGV 609
+ T N V + + + G E + SM KE G+
Sbjct: 547 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 588
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 193/423 (45%), Gaps = 73/423 (17%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M Q PD T+ ++++C LG+ +H +++S + N LI++Y+K
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 232 ILDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
A +F + ++D+ SW +M+ F+ N ME W
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFAN--------NSME------W------------ 128
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--------- 341
+A+ F +M + P+ +++ AC++ + G I+ +++K G+
Sbjct: 129 --QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGC 186
Query: 342 -------------------YSNVPVCNAILQHQ----------AGELFRLFSLMLASQTK 372
+ +P N + A + LF M S
Sbjct: 187 ELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV 246
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC---GSLGSA 429
PD T++ V+ AC + L +G QLH +++ GLALDV V L+DMY KC GS+ +
Sbjct: 247 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 306
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFG-CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
R++F M + +V+SW+++I Y Q G C +EA++LF +M S +RPNH + VL AC +
Sbjct: 307 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+ G Q+Y + GI + ++ + AR+GR+ +A + + F+ ++V +
Sbjct: 367 LSDPYTGEQVYSYAV-KLGIASVNCVGNSLISMYARSGRMEDARKAFD-ILFEKNLVSYN 424
Query: 549 SLL 551
+++
Sbjct: 425 AIV 427
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 157/324 (48%), Gaps = 37/324 (11%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
IRP+ +++ ++ AC +L G +V+ + + + N +++MY + G +EDAR
Sbjct: 350 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 409
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
FD + ++N+VS+ A++ G ++N + A L+ ++ +G+ FTF S++ + +
Sbjct: 410 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 469
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G G Q+H ++K + S+ NALI+MY++ I A+ VF+ + +++ SW SMI
Sbjct: 470 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 529
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
GF+K F A A+ +F +M + P+ +T +
Sbjct: 530 GFAKHGF----------------------------ATRALEMFHKMLETGTKPNEITYVA 561
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQ 370
+L AC+ + +G + + + K+ + VP C L ++G L + +
Sbjct: 562 VLSACSHVGMISEGQKHFNSMYKE--HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 619
Query: 371 TKPDHITFNDVMGACAAMASLEMG 394
D + + ++GAC + E+G
Sbjct: 620 LMADALVWRTLLGACRVHGNTELG 643
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EA + F+ + + T I T+A L+S +S+ ++ G ++H +L + + + N +
Sbjct: 438 EAFLLFNEIAD-TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 496
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++MY +CG++E A VF+EM RNV+SWT+MI G +++G A+E++ +ML++G P++
Sbjct: 497 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 556
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
T+ +++ ACS + + G Q H + + EHG
Sbjct: 557 ITYVAVLSACSHVGMISEG-QKHFNSMYKEHG 587
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 49/327 (14%)
Query: 346 PVCNAIL-QHQAGELFRLFS---LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
P+ N ++ Q G L FS LM PD T++ ++ +C + ++G +H +
Sbjct: 11 PLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKL 70
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEA 460
M++GL LD V+N L+ +Y KCG +AR +F M + D+VSWS+++ +A +A
Sbjct: 71 MQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQA 130
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI------------------- 501
+ F M G PN V+ ACS+ G +Y
Sbjct: 131 IWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELID 190
Query: 502 --------MQNEYGIIPTRERRSCV-----VDLLARAGRVHEAEDFINQM---AFDDDIV 545
+ + Y + R+ V + A+ G +A D M + D
Sbjct: 191 MFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 250
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILK----IDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ S+L++C G + +GK+ +++ +D +LV + A+ G ++ ++
Sbjct: 251 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 310
Query: 602 GSMKERGVRKVPGQSWIEIQTKIHASG 628
M E V SW I T SG
Sbjct: 311 EQMPEHNV-----MSWTAIITAYVQSG 332
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 192/609 (31%), Positives = 328/609 (53%), Gaps = 54/609 (8%)
Query: 66 AFDFLQNNTN-----FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
F FL ++++ R PS L+ C +L+SL+L +H ++ + +
Sbjct: 16 PFHFLPSSSDPPYDSLRNHPSL--SLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSK 70
Query: 121 ILNM---YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+L + L A VF+ + + N++ W M G + + +A++LYV M+ GL
Sbjct: 71 LLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL 130
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
+P+ +TF ++++C+ G+Q+H HV+K + L +LI++Y + R+ DA
Sbjct: 131 LPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARK 190
Query: 238 VFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
VF +D+ S+ ++I G++ ++ A+ +F+E+ ++ SWN +I+G A N EA
Sbjct: 191 VFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--L 352
+ LF EM + PD T+ +++ AC S+ G Q+HS+I GF SN+ + N++ L
Sbjct: 251 LELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDL 310
Query: 353 QHQAGEL----------------------------------FRLFSLMLASQTKPDHITF 378
+ GEL LF ML S +P+ +T
Sbjct: 311 YSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTM 370
Query: 379 NDVMGACAAMASLEMGTQLHCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
++ ACA + ++++G +H YI K + L+DMY KCG + +A ++FN +
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ SW+++I G+A G + A +F RMR G+ P+ +T VG+L+ACS G+++ G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGR 490
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
++R M +Y I P E C++DLL +G EAE+ IN M + D V+W SLL +CK
Sbjct: 491 HIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKI 550
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
GNV++G+ A+N++KI+P N VLL NIYA++G+W EVA++ + ++G++KVPG S
Sbjct: 551 RGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCS 610
Query: 617 WIEIQTKIH 625
IEI + +H
Sbjct: 611 SIEIDSVVH 619
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 199/623 (31%), Positives = 312/623 (50%), Gaps = 96/623 (15%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ TY+ ++ C+ L+S G+KVH I S+ D L +++ Y CG L++ R V
Sbjct: 97 LETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156
Query: 138 FDEMPQRNV--------------------------------------------------- 146
FD M ++NV
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDV 216
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW +MI+G NG + +Y QM+ G+ D T S++ C+ + LG+ +H+
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
IKS + N L+ MY+K LD A V
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKC----------------------------GDLDGALRV 308
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F +M N+ SW ++IAG ++ A+ L +M + D + + S+L AC SL
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL---FRLFSLMLAS----------QT 371
G +H YI SN+ VCNA++ A G + +FS M+ +
Sbjct: 369 DNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL 428
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
KPD T V+ ACA++++LE G ++H YI++ G + D V N L+D+YVKCG LG AR
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
LF+ + D+VSW+ +I GY G G EA+ F MR +G+ P+ V+ + +L ACSH GL
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+E+G + + IM+N++ I P E +C+VDLL+R G + +A +FI + D +W +LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
C+ + ++++ ++ AE + +++P NS VLL NIYA + KWEEV RL + ++G+RK
Sbjct: 609 CGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRK 668
Query: 612 VPGQSWIEIQTKIH--ASGNDIS 632
PG SWIEI+ K++ SGN+ S
Sbjct: 669 NPGCSWIEIKGKVNLFVSGNNSS 691
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 189/420 (45%), Gaps = 71/420 (16%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTNFR--------------IRPSTYADLISACSSL 93
F+LF LC +++ + + ++ N R + +T ++ C++
Sbjct: 205 FELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANS 264
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+L LG+ VH + S + N +L+MY KCG L+ A VF++M +RNVVSWT+MI
Sbjct: 265 GTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMI 324
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AG +++G+ + AI+L QM + G+ D SI+ AC+ + G+ +H ++ +
Sbjct: 325 AGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNME 384
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI------------------- 254
S+L NAL+ MY K + A +VFS++ KDI SW +MI
Sbjct: 385 SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACAS 444
Query: 255 ----------------DGFSK-----------------LDFARTVFNEMESPNLASWNTI 281
+G+S L AR +F+ + S +L SW +
Sbjct: 445 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 504
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
IAG NEA++ F+EM D + PD ++ S+L AC+ L QG + YI+K F
Sbjct: 505 IAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDF 563
Query: 342 YSNVPV----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+ C L + G L + + + PD + ++ C +E+ ++
Sbjct: 564 NIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKV 623
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 130/256 (50%), Gaps = 13/256 (5%)
Query: 63 ALVAFDFLQNNTNF-RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+V D + NT ++P T A ++ AC+SL +L+ G+++H +IL + D + N
Sbjct: 412 TMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVAN 471
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++++Y KCG L AR++FD +P +++VSWT MIAG +G N AI + +M +G+ P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 531
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWN 237
D+ +F SI+ ACS + G + +++K++ L ++ + ++ + A+
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 238 VFSSIA-RKDITSWGSMIDG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASCSN 290
++ D T WG+++ G + ++ A V E+E N + + A
Sbjct: 591 FIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEK 650
Query: 291 ANEAMSLFSEMGDREL 306
E L ++G + L
Sbjct: 651 WEEVKRLREKIGKQGL 666
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 64/271 (23%)
Query: 349 NAILQH--QAGELFRLFSLM-LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
NA + H Q G+L L+ + +++ + T++ V+ CA + S G ++H I
Sbjct: 70 NAKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNS 129
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFME---------------------------- 437
+ +D + L+ Y CG L R +F+ ME
Sbjct: 130 VGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFK 189
Query: 438 -----------------------DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
D DV+SW+S+I GY G E L ++++M G+
Sbjct: 190 IMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDV 249
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR----SCVVDLLARAGRVHE 530
+ T++ VL C++ G + G ++ + I + ERR + ++D+ ++ G +
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSL-----AIKSSFERRINFSNTLLDMYSKCGDLDG 304
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
A +M + ++V W S++A G D
Sbjct: 305 ALRVFEKMG-ERNVVSWTSMIAGYTRDGRSD 334
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 289/572 (50%), Gaps = 75/572 (13%)
Query: 102 VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQ 161
VH H++ + + + + ++N+Y KCG + +AR VFD +P+RNVV WT ++ G QN Q
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
A+E++ ML+SG P FT + ACS L + LG+Q HA +IK NA
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTI 281
L ++Y+KF LD + F E ++ SW TI
Sbjct: 122 LCSLYSKF----------------------------GSLDSSVKAFRETGEKDVISWTTI 153
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
I+ A + LF EM + P+ T+ S+L C++ S GMQ+HS K G
Sbjct: 154 ISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGH 213
Query: 342 YSNVPVCNAIL-----------------------------------------------QH 354
SN+ + N+++ Q
Sbjct: 214 ESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQ 273
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
E ++ + S KPD T + ++ C+ +A+LE G Q+H +K+G DV V
Sbjct: 274 TGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGT 333
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
L+DMY KCGS+ AR+ F M ++SW+S+I +A+ G + AL+LF MR +G RP
Sbjct: 334 ALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRP 393
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
N +T VGVL ACSH G+V+E L+ + IMQ EY I P + C+VD+ R GR+ EA D
Sbjct: 394 NQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDV 453
Query: 535 INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKW 594
I +M + + +W L+A C+ HGN ++G AAE +LK+ P ++ V+L N+Y S+ +W
Sbjct: 454 IKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERW 513
Query: 595 EEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
E+V+ + MKE V K+ S I I+ ++H+
Sbjct: 514 EDVSMVRRLMKEEKVGKLKDWSRISIKGEVHS 545
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 228/495 (46%), Gaps = 70/495 (14%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ + C ++ A +V D+ RR +W L + + + A+ F + + +F
Sbjct: 23 NVYAKCGVMVNARKVFDNLPRRNVVVWT-TLMTGYVQNSQPEVAVEVFGDMLESGSF--- 78
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
PS T + ++ACSSL S+ LG++ H I+ + D+ + N + ++Y K GSL+ +
Sbjct: 79 PSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKA 138
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F E +++V+SWT +I+ C NG+ + L+++ML + P+ FT S++ CS +
Sbjct: 139 FRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSS 198
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG Q+H+ K H S+L N+L+ +Y K I +A N+F+ + K++ +W +MI G
Sbjct: 199 DLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGH 258
Query: 258 SK-LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
++ +D A+ F+ ++ EA+ ++ ++ PD T+ S+
Sbjct: 259 AQAMDLAKDNFSAQQT------------------GTEALGMYLKLNRSGRKPDLFTLSSI 300
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------ 352
L C+ +L QG QIH+ IK GF S+V V A++
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360
Query: 353 ------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
Q+ +LF M + +P+ ITF V+ AC+ ++ +
Sbjct: 361 ISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI 420
Query: 401 IMKTGLALDVFVMNG-LMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFG--- 455
+ K V G L+DM+V+ G L A ++ M+ +P+ W LI G G
Sbjct: 421 MQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEE 480
Query: 456 ----CGEEALKLFRR 466
E+ LKL R
Sbjct: 481 LGFYAAEQLLKLKPR 495
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 207/609 (33%), Positives = 320/609 (52%), Gaps = 76/609 (12%)
Query: 56 KQNLYNE-ALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
+QN NE AL F +Q + P T+A ++ ++ +++ G +VH ++ S
Sbjct: 169 RQNGLNEQALKLFSQMQLE-GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ N ++NMY K + DA+ VFD M RN VSW +MIAG NG + A EL+ +M
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
G+ Q F ++I+ C+ + + +QLH VIK+ L + AL+ Y+K I D
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDD 347
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
A+ +F M+ G N+ SW II+G + A
Sbjct: 348 AFKLFC------------MMHGVQ---------------NVVSWTAIISGYVQNGRTDRA 380
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCA--CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
M+LF +M + P+ T ++L A SP QIH+ ++K Y N P L
Sbjct: 381 MNLFCQMRREGVRPNHFTYSTILTANAAVSP------SQIHALVVKTN-YENSPSVGTAL 433
Query: 353 Q---------HQAGELFRLFS---------------------------LMLASQ-TKPDH 375
++A ++F L L LA + +P+
Sbjct: 434 SDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNE 493
Query: 376 ITFNDVMGACAA-MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
TF+ V+ ACAA AS+E G Q H +K+G + + V + L+ MY K G++ SA E+F
Sbjct: 494 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 553
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
D D+VSW+S+I GYAQ GCG+++LK+F MRS + + +T +GV++AC+H GLV E
Sbjct: 554 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNE 613
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G + + +M +Y I+PT E SC+VDL +RAG + +A D IN+M F +W++LLA+C
Sbjct: 614 GQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAAC 673
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H NV +G+ AAE ++ + P +SAA VLL NIYA++G W+E A++ M + V+K G
Sbjct: 674 RVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAG 733
Query: 615 QSWIEIQTK 623
SWIE++ K
Sbjct: 734 YSWIEVKNK 742
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 256/544 (47%), Gaps = 52/544 (9%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRI--------RPSTYAD------LISACSSLRS 95
LF +Q L + F+F +N+ N R + D ++ C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+G++VH + D + +++MY K S+ED VFDEM +NVVSWT+++AG
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
QNG A++L+ QM G+ P+ FTF +++ + V G Q+H VIKS S
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF--SKLDF-ARTVFNEMES 272
+ N+++ MY+K + DA VF S+ ++ SW SMI GF + LD A +F M
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 273 PNLASWNTIIAGVAS-CSNANEAMSLFSEMGDRELIPDG----LTVRSLLCACTSPLS-- 325
+ TI A V C+N E MS F++ ++I +G L +++ L S S
Sbjct: 288 EGVKLTQTIFATVIKLCANIKE-MS-FAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345
Query: 326 --------LYQGMQ--IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDH 375
+ G+Q + I G+ N A+ LF M +P+H
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAM---------NLFCQMRREGVRPNH 396
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
T++ ++ A AA++ +Q+H ++KT V L D Y K G A ++F
Sbjct: 397 FTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFEL 452
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH-VGLVEE 494
+++ D+V+WS+++ GYAQ G E A+K+F ++ GV PN T VL AC+ VE+
Sbjct: 453 IDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQ 512
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G Q + + G S +V + A+ G + A + + D D+V W S+++
Sbjct: 513 GKQFHSC-SIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQV-DRDLVSWNSMISGY 570
Query: 555 KTHG 558
HG
Sbjct: 571 AQHG 574
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 206/466 (44%), Gaps = 73/466 (15%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
++ +FDE PQ+ + ++ S+N Q A+ L++ + +SG D + +++ C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L +G+Q+H IK + +L+ MY K + + D VF + K++ SW S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ G+ + NE +A+ LFS+M + P+ T
Sbjct: 165 LAGYRQ-----NGLNE-----------------------QALKLFSQMQLEGIKPNPFTF 196
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------------- 357
++L + ++ +G+Q+H+ +IK G S + V N+++ +
Sbjct: 197 AAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMEN 256
Query: 358 --------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
E F LF M K F V+ CA + + QL
Sbjct: 257 RNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQL 316
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVGYAQFGC 456
HC ++K G D+ + LM Y KC + A +LF M +VVSW+++I GY Q G
Sbjct: 317 HCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGR 376
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERR 515
+ A+ LF +MR GVRPNH T +LTA + V Q++ +++ Y P+
Sbjct: 377 TDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPS----QIHALVVKTNYENSPSVG-- 430
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ + D ++ G +EA I ++ + DIV W ++L+ G+++
Sbjct: 431 TALSDSYSKIGDANEAAK-IFELIDEKDIVAWSAMLSGYAQMGDIE 475
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 203/642 (31%), Positives = 329/642 (51%), Gaps = 67/642 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+A+ C +D A + R D W+ L + + Y + ++ FD L + + I
Sbjct: 204 EAYVSCGEVDVAERALLDSPVRSDVSWNA-LLNEYARDGDYAKVMLVFDKLVESGD-EIS 261
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T ++ C L + G+ VH ++ + D VL+N ++ MY KC S EDA VF
Sbjct: 262 KYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFA 321
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ + +VV + MI+ ++ A ++++QM G+ P+Q+TF + S V L
Sbjct: 322 RIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNL 381
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
R +HAH++KS +A++ MY K + DA
Sbjct: 382 CRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAI----------------------- 418
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
F+ M+ P++ASWNT+++G S +N + +F E+ ++ + T +L
Sbjct: 419 -----LAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRC 473
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAG-------------------- 357
CTS + L G Q+H+ ++K GF + V +L QAG
Sbjct: 474 CTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSW 533
Query: 358 --------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ F ML +P+ T + C+ +A L G QLH Y +K
Sbjct: 534 TVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIK 593
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G V V + L+DMYVKCG+L A LF+ + D+V W+++I GYAQ G G +AL+
Sbjct: 594 SGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEA 652
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F+ M G P+ +T VGVL+ACSH GL++EG + ++++ + YGI PT E +C+VD+LA
Sbjct: 653 FQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILA 712
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
+AG++ EAE IN+M D +WK++L +C+ HGN+++ +RAAE + + P + ++ +L
Sbjct: 713 KAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCIL 772
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L NIYA +W +VA+L + +RGV+K PG SWIEI K+H
Sbjct: 773 LSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLH 814
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 254/512 (49%), Gaps = 22/512 (4%)
Query: 71 QNNTNFRIRPS---TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
+++ R+R +YA + C++ R+L+ G+ +H +L S +PDA LH+ +LNMY K
Sbjct: 48 RDDERLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCK 107
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI 187
CG L DAR VFD MP R+VV+WTAM++ + G AA+ L+ +M + G++P+ F +
Sbjct: 108 CGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAA 167
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN-VFSSIARKD 246
++AC+ +G Q+HA +K E ++L+ Y + A + S R D
Sbjct: 168 LKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSD 227
Query: 247 ITSWGSMIDGFSK-LDFART--VFNEM-ESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+ SW ++++ +++ D+A+ VF+++ ES + S T+ + C A S + G
Sbjct: 228 V-SWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHG 286
Query: 303 DRELIPDGLTVRSLLCAC-----TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ-A 356
+I GL +L C + LS ++ + I + + + +H A
Sbjct: 287 --LVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMA 344
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E F +F M KP+ TF + + + + +H +I+K+G + V + +
Sbjct: 345 PEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAI 404
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+ MYVK G++ A F+ M+ PD+ SW++L+ G+ E L++F+ + GV N
Sbjct: 405 VGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANK 464
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
T VG+L C+ + + G Q++ + G + ++D+ +AG A +
Sbjct: 465 YTYVGILRCCTSLMDLRFGCQVHACVLKS-GFQGDYDVSKMLLDMYVQAGCFTNARLVFD 523
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
++ + D+ W +++ T+ D G++A E
Sbjct: 524 RLK-ERDVFSWTVVMS---TYAKTDEGEKAIE 551
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 222/518 (42%), Gaps = 79/518 (15%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A + AC+ L +VH + + D + + ++ Y CG ++ A + P
Sbjct: 165 AAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPV 224
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
R+ VSW A++ +++G + ++ ++++SG ++T ++++ C L G+ +
Sbjct: 225 RSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAV 284
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H VIK + + N LI MY+K DA+ VF+ I D+ MI F + D A
Sbjct: 285 HGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMA 344
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
EA +F +M D + P+ T L +
Sbjct: 345 ----------------------------PEAFDIFMQMSDMGVKPNQYTFVGLAIVASRT 376
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAGEL---------------------- 359
+ IH++I+K GF VC+AI+ + G +
Sbjct: 377 GDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLL 436
Query: 360 ------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
R+F ++ + T+ ++ C ++ L G Q+H ++K+G
Sbjct: 437 SGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQ 496
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D V L+DMYV+ G +AR +F+ +++ DV SW+ ++ YA+ GE+A++ FR M
Sbjct: 497 GDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSM 556
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARA 525
RPN TL L+ CS + + GLQL Y I + + S +VD+ +
Sbjct: 557 LRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSVVS----SALVDMYVKC 612
Query: 526 GRVHEAEDFINQMAFDD----DIVVWKSLLASCKTHGN 559
G + +AE M FD+ D+V W +++ HG+
Sbjct: 613 GNLADAE-----MLFDESDTHDLVEWNTIICGYAQHGH 645
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/563 (35%), Positives = 306/563 (54%), Gaps = 65/563 (11%)
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLED-ARMVFDEMPQRNVVSWTAMIAGCSQN 159
++H H L + D V+ L+MY KC +L D + +F+ +P N+ S+ A+I G +++
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARS 291
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
+ A+ ++ + +SGL D+ + RAC+ + G Q+H +KS S++
Sbjct: 292 DKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 351
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
NA++ MY K +++A VF EM S + SWN
Sbjct: 352 NAILDMYGKCGALVEAC----------------------------LVFEEMVSRDAVSWN 383
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
IIA N + +SLF M + PD T S+L AC +L GM+IH+ IIK
Sbjct: 384 AIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS 443
Query: 340 --GFYSNVPVC-----------------------------NAI-----LQHQAGELFRLF 363
G S V + NAI LQ Q+ E + F
Sbjct: 444 RMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTF 503
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
S ML PD+ T+ ++ CA + ++E+G Q+H I+K L D ++ + L+DMY KC
Sbjct: 504 SKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKC 563
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
G++ + +F + D V+W++++ GYAQ G GEEALK+F M+ V+PNH T + VL
Sbjct: 564 GNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 623
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
AC H+GLVE+GL + M + YG+ P E SCVVD++ R+G+V +A + I M F+ D
Sbjct: 624 RACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEAD 683
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
V+W++LL+ CK HGNV+V ++AA +IL+++P +SAA VLL NIYA++G W EV +L
Sbjct: 684 AVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKM 743
Query: 604 MKERGVRKVPGQSWIEIQTKIHA 626
M+ G++K PG SWIEI++++HA
Sbjct: 744 MRFNGLKKEPGCSWIEIKSEVHA 766
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 258/558 (46%), Gaps = 81/558 (14%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ T++ + CS ++L G++ H ++ ++ +P + N ++ MY KC L A VF
Sbjct: 41 KKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVF 100
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELY---------------VQMLQSGLMPDQFT 183
D MPQR+ VSW AM+ G + G A +L+ +M + G + D+ T
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTT 160
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF----DRILDAWNVF 239
F ++++CS L G G Q+H +K +++ +AL+ MY K D + +F
Sbjct: 161 FAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELF 220
Query: 240 SSIARKDI-----------TSWGS-MIDGFSKLDF----------ARTVFNEMESPNLAS 277
+ + + T +G+ ++ G + LD + +FN + + NL S
Sbjct: 221 KEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQS 280
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
+N II G A EA+ +F + L D +++ AC +G+Q+H +
Sbjct: 281 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSM 340
Query: 338 KKGFYSNVPVCNAIL---------------------------------QHQAG---ELFR 361
K SN+ V NAIL Q G +
Sbjct: 341 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 400
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
LF ML S +PD T+ V+ ACA +L G ++H I+K+ + LD FV L+DMY
Sbjct: 401 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYS 460
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG + A +L + + + VVSW+++I G++ EEA K F +M GV P++ T
Sbjct: 461 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 520
Query: 482 VLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
+L C+++ VE G Q++ +I++ E + S +VD+ ++ G + + + I + A
Sbjct: 521 ILDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQDFQ-LIFEKAP 577
Query: 541 DDDIVVWKSLLASCKTHG 558
+ D V W +++ HG
Sbjct: 578 NRDFVTWNAMVCGYAQHG 595
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 205/452 (45%), Gaps = 82/452 (18%)
Query: 50 LFSSLCKQNL--YN-------------EALVAFDFLQNNTNFRIRPSTYADLISACSSLR 94
LF+SL NL YN EAL F LQ + + + + AC+ ++
Sbjct: 269 LFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQK-SGLGLDEVSLSGAXRACAVIK 327
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
G +VH + S CQ + + N IL+MYGKCG+L +A +VF+EM R+ VSW A+IA
Sbjct: 328 GDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIA 387
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
QNG E + L+V MLQSG+ PD+FT+GS+++AC+G + G ++H +IKS G
Sbjct: 388 AHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGL 447
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
ALI MY+K + A + +A + + SW ++I GFS
Sbjct: 448 DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ-------------- 493
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
+ EA FS+M + + PD T ++L C + +++ G QIH+
Sbjct: 494 --------------KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 539
Query: 335 YIIKKGFYSNVPVCNAIL-----------------------------------QHQAG-E 358
IIKK S+ + + ++ QH G E
Sbjct: 540 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 599
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFVMNGLM 417
++F M KP+H TF V+ AC M +E G H + GL + + ++
Sbjct: 600 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVV 659
Query: 418 DMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
D+ + G + A EL M + D V W +L+
Sbjct: 660 DIMGRSGQVSKALELIEGMPFEADAVIWRTLL 691
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
FS A+ TK TF+ + C+ +L G Q H ++ T VFV N L+ MY+K
Sbjct: 32 FSSYQATPTKKK--TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIK 89
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
C LG A ++F+ M D VSW++++ GYA G A KLF M +G
Sbjct: 90 CSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTG 138
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 304/582 (52%), Gaps = 64/582 (10%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T A L+ ACS+ +L G+++H + + + +LN+Y KC +E A F E
Sbjct: 350 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 409
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
NVV W M+ + ++ QM ++P+Q+T+ SI++ C L + LG
Sbjct: 410 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 469
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+H+ +IK+ + + LI MY K ++ AW++ A KD+ S
Sbjct: 470 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS----------- 518
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
W T+IAG + ++A++ F +M DR + D + + + + AC
Sbjct: 519 -----------------WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 561
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QHQAG------ 357
+L +G QIH+ GF S++P NA++ Q +AG
Sbjct: 562 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 621
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E R+F M ++ TF + A + A+++ G Q+H I KT
Sbjct: 622 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 681
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + V N L+ MY KCGS+ A + F + + VSW+++I Y++ G G EAL F
Sbjct: 682 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 741
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M S VRPNHVTLVGVL+ACSH+GLV++G+ + M +EYG+ P E CVVD+L R
Sbjct: 742 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 801
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + A++FI +M D +VW++LL++C H N+++G+ AA ++L+++P +SA VLL
Sbjct: 802 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 861
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N+YA S KW+ MKE+GV+K PGQSWIE++ IH+
Sbjct: 862 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 903
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 156/572 (27%), Positives = 269/572 (47%), Gaps = 69/572 (12%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A +V D R W+ + L +NL E F + + N T++ ++ AC
Sbjct: 99 AFKVFDEMPERTIFTWN-KMIKELASRNLIGEVFGLFVRMVSE-NVTPNEGTFSGVLEAC 156
Query: 91 SSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
+ + ++H IL + V+ N ++++Y + G ++ AR VFD + ++ SW
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 216
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
AMI+G S+N E AI L+ M G+MP + F S++ AC + + +G QLH V+K
Sbjct: 217 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 276
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
S NAL+++Y ++ A ++FS+++++D
Sbjct: 277 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV--------------------- 315
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
++NT+I G++ C +AM LF M L PD T+ SL+ AC++ +L++G
Sbjct: 316 -------TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 368
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQA------------------------------GEL 359
Q+H+Y K GF SN + A+L A G L
Sbjct: 369 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 428
Query: 360 ------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
FR+F M + P+ T+ ++ C + LE+G Q+H I+KT L+ +V
Sbjct: 429 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 488
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ L+DMY K G L +A ++ DVVSW+++I GY Q+ ++AL FR+M G+R
Sbjct: 489 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 548
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+ V L ++AC+ + ++EG Q++ G ++ +V L +R G++ E+
Sbjct: 549 SDEVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 607
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
Q D+I W +L++ + GN + R
Sbjct: 608 AFEQTEAGDNI-AWNALVSGFQQSGNNEEALR 638
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 233/515 (45%), Gaps = 66/515 (12%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P ++ ++SAC + SL++G ++H +L D + N ++++Y G+L A +F
Sbjct: 248 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 307
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M QR+ V++ +I G SQ G A+EL+ +M GL PD T S++ ACS +
Sbjct: 308 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+QLHA+ K S+ + AL+ +Y K I A
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA------------------------ 403
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
LD+ F E E N+ WN ++ + + +F +M E++P+ T S+L
Sbjct: 404 LDY----FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 459
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL------------------ 359
C L G QIHS IIK F N VC+ ++ A G+L
Sbjct: 460 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 519
Query: 360 ----------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
F ML + D + + + ACA + +L+ G Q+H
Sbjct: 520 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 579
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + D+ N L+ +Y +CG + + F E D ++W++L+ G+ Q G EEAL++
Sbjct: 580 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 639
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM G+ N+ T + A S +++G Q++ ++ + G E + ++ + A
Sbjct: 640 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYA 698
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + +AE +++ ++ V W +++ + HG
Sbjct: 699 KCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKHG 732
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 228/519 (43%), Gaps = 72/519 (13%)
Query: 75 NFRIRPS--TYADLISACSSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
N IRP+ T L+ C SL GRK+H IL + L + + Y G L
Sbjct: 37 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 96
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
A VFDEMP+R + +W MI + L+V+M+ + P++ TF ++ AC
Sbjct: 97 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 156
Query: 192 -SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
G + Q+HA ++ + N LI +Y++
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR---------------------- 194
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+GF +D AR VF+ + + +SW +I+G++ EA+ LF +M ++P
Sbjct: 195 ----NGF--VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 248
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELF-------- 360
S+L AC SL G Q+H ++K GF S+ VCNA+ L G L
Sbjct: 249 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 308
Query: 361 --------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
LF M +PD T ++ AC+A +L G
Sbjct: 309 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 368
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
QLH Y K G A + + L+++Y KC + +A + F E +VV W+ ++V Y
Sbjct: 369 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 428
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRE 513
+ ++FR+M+ + PN T +L C +G +E G Q++ +I++ + +
Sbjct: 429 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL--NAY 486
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S ++D+ A+ G++ A D + + A D+V W +++A
Sbjct: 487 VCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIA 524
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 189/440 (42%), Gaps = 78/440 (17%)
Query: 59 LYNEALVAFDFLQNNTN-FRI-----------RPSTYADLISACSSLRSLQLGRKVHDHI 106
L+N LVA+ L + N FRI TY ++ C L L+LG ++H I
Sbjct: 417 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 476
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ + Q +A + + +++MY K G L+ A + ++VVSWT MIAG +Q ++ A+
Sbjct: 477 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 536
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ QML G+ D+ + + AC+GL + G+Q+HA S S L QNAL+ +Y
Sbjct: 537 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 596
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
++ +I +++ F D +W +++ GF +
Sbjct: 597 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ--------------------------- 629
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
N EA+ +F M + + T S + A + ++ QG Q+H+ I K G+ S
Sbjct: 630 -SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 688
Query: 347 VCNAIL-----------------------------------QHQAG-ELFRLFSLMLASQ 370
VCNA++ +H G E F M+ S
Sbjct: 689 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 748
Query: 371 TKPDHITFNDVMGACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+P+H+T V+ AC+ + ++ G + GL+ ++DM + G L A
Sbjct: 749 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 808
Query: 430 RELFNFME-DPDVVSWSSLI 448
+E M PD + W +L+
Sbjct: 809 KEFIQEMPIKPDALVWRTLL 828
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 181/417 (43%), Gaps = 79/417 (18%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A VF+EM + +WN +I +AS + E LF M + P+ T +L AC
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 323 PLSLYQGM-QIHSYIIKKGFYSNVPVCNAILQ----------------------HQA--- 356
+ + QIH+ I+ +G + VCN ++ H +
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218
Query: 357 -----------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E RLF M P F+ V+ AC + SLE+G QLH ++K G
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 278
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ D +V N L+ +Y G+L SA +F+ M D V++++LI G +Q G GE+A++LF+
Sbjct: 279 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 338
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
RM G+ P+ TL ++ ACS G + G QL+ + G + +++L A+
Sbjct: 339 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH-AYTTKLGFASNNKIEGALLNLYAKC 397
Query: 526 GRVHEAEDFINQMAFDDDIVVWK-----------------------------------SL 550
+ A D+ + +++V+W S+
Sbjct: 398 ADIETALDYFLETEV-ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 456
Query: 551 LASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGK----WEEVARLMG 602
L +C G++++G++ I+K + N+ +L ++YA GK W+ + R G
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 513
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 170/370 (45%), Gaps = 33/370 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A +++ F + W + + + N ++AL F + + R + +
Sbjct: 501 LDTAWDILIRFAGKDVVSWT-TMIAGYTQYNFDDKALTTFRQMLDR-GIRSDEVGLTNAV 558
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ L++L+ G+++H S D N ++ +Y +CG +E++ + F++ + +
Sbjct: 559 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 618
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W A+++G Q+G A+ ++V+M + G+ + FTFGS ++A S + G+Q+HA +
Sbjct: 619 AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 678
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
K+ + S NALI+MY K I DA F
Sbjct: 679 TKTGYDSETEVCNALISMYAKCGSISDA----------------------------EKQF 710
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
E+ + N SWN II + +EA+ F +M + P+ +T+ +L AC+ +
Sbjct: 711 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 770
Query: 328 QGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G+ + + S P VC + +AG L R + KPD + + ++ A
Sbjct: 771 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 830
Query: 385 CAAMASLEMG 394
C ++E+G
Sbjct: 831 CVVHKNMEIG 840
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 304/582 (52%), Gaps = 64/582 (10%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T A L+ ACS+ +L G+++H + + + +LN+Y KC +E A F E
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
NVV W M+ + ++ QM ++P+Q+T+ SI++ C L + LG
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+H+ +IK+ + + LI MY K ++ AW++ A KD+ S
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS----------- 558
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
W T+IAG + ++A++ F +M DR + D + + + + AC
Sbjct: 559 -----------------WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 601
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QHQAG------ 357
+L +G QIH+ GF S++P NA++ Q +AG
Sbjct: 602 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E R+F M ++ TF + A + A+++ G Q+H I KT
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + V N L+ MY KCGS+ A + F + + VSW+++I Y++ G G EAL F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M S VRPNHVTLVGVL+ACSH+GLV++G+ + M +EYG+ P E CVVD+L R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + A++FI +M D +VW++LL++C H N+++G+ AA ++L+++P +SA VLL
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N+YA S KW+ MKE+GV+K PGQSWIE++ IH+
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 156/572 (27%), Positives = 269/572 (47%), Gaps = 69/572 (12%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A +V D R W+ + L +NL E F + + N T++ ++ AC
Sbjct: 139 AFKVFDEMPERTIFTWN-KMIKELASRNLIGEVFGLFVRMVSE-NVTPNEGTFSGVLEAC 196
Query: 91 SSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
+ + ++H IL + V+ N ++++Y + G ++ AR VFD + ++ SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
AMI+G S+N E AI L+ M G+MP + F S++ AC + + +G QLH V+K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
S NAL+++Y ++ A ++FS+++++D
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV--------------------- 355
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
++NT+I G++ C +AM LF M L PD T+ SL+ AC++ +L++G
Sbjct: 356 -------TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQA------------------------------GEL 359
Q+H+Y K GF SN + A+L A G L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 360 ------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
FR+F M + P+ T+ ++ C + LE+G Q+H I+KT L+ +V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ L+DMY K G L +A ++ DVVSW+++I GY Q+ ++AL FR+M G+R
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+ V L ++AC+ + ++EG Q++ G ++ +V L +R G++ E+
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
Q D+I W +L++ + GN + R
Sbjct: 648 AFEQTEAGDNI-AWNALVSGFQQSGNNEEALR 678
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 233/515 (45%), Gaps = 66/515 (12%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P ++ ++SAC + SL++G ++H +L D + N ++++Y G+L A +F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M QR+ V++ +I G SQ G A+EL+ +M GL PD T S++ ACS +
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+QLHA+ K S+ + AL+ +Y K I A
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA------------------------ 443
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
LD+ F E E N+ WN ++ + + +F +M E++P+ T S+L
Sbjct: 444 LDY----FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL------------------ 359
C L G QIHS IIK F N VC+ ++ A G+L
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 360 ----------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
F ML + D + + + ACA + +L+ G Q+H
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + D+ N L+ +Y +CG + + F E D ++W++L+ G+ Q G EEAL++
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM G+ N+ T + A S +++G Q++ ++ + G E + ++ + A
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYA 738
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + +AE +++ ++ V W +++ + HG
Sbjct: 739 KCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKHG 772
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 228/519 (43%), Gaps = 72/519 (13%)
Query: 75 NFRIRPS--TYADLISACSSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
N IRP+ T L+ C SL GRK+H IL + L + + Y G L
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
A VFDEMP+R + +W MI + L+V+M+ + P++ TF ++ AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 192 -SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
G + Q+HA ++ + N LI +Y++
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR---------------------- 234
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+GF +D AR VF+ + + +SW +I+G++ EA+ LF +M ++P
Sbjct: 235 ----NGF--VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELF-------- 360
S+L AC SL G Q+H ++K GF S+ VCNA+ L G L
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 361 --------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
LF M +PD T ++ AC+A +L G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
QLH Y K G A + + L+++Y KC + +A + F E +VV W+ ++V Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRE 513
+ ++FR+M+ + PN T +L C +G +E G Q++ +I++ + +
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL--NAY 526
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S ++D+ A+ G++ A D + + A D+V W +++A
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIA 564
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 189/440 (42%), Gaps = 78/440 (17%)
Query: 59 LYNEALVAFDFLQNNTN-FRI-----------RPSTYADLISACSSLRSLQLGRKVHDHI 106
L+N LVA+ L + N FRI TY ++ C L L+LG ++H I
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ + Q +A + + +++MY K G L+ A + ++VVSWT MIAG +Q ++ A+
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ QML G+ D+ + + AC+GL + G+Q+HA S S L QNAL+ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
++ +I +++ F D +W +++ GF +
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ--------------------------- 669
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
N EA+ +F M + + T S + A + ++ QG Q+H+ I K G+ S
Sbjct: 670 -SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 728
Query: 347 VCNAIL-----------------------------------QHQAG-ELFRLFSLMLASQ 370
VCNA++ +H G E F M+ S
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 371 TKPDHITFNDVMGACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+P+H+T V+ AC+ + ++ G + GL+ ++DM + G L A
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 430 RELFNFME-DPDVVSWSSLI 448
+E M PD + W +L+
Sbjct: 849 KEFIQEMPIKPDALVWRTLL 868
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 181/417 (43%), Gaps = 79/417 (18%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A VF+EM + +WN +I +AS + E LF M + P+ T +L AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 323 PLSLYQGM-QIHSYIIKKGFYSNVPVCNAILQ----------------------HQA--- 356
+ + QIH+ I+ +G + VCN ++ H +
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 357 -----------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E RLF M P F+ V+ AC + SLE+G QLH ++K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ D +V N L+ +Y G+L SA +F+ M D V++++LI G +Q G GE+A++LF+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
RM G+ P+ TL ++ ACS G + G QL+ + G + +++L A+
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH-AYTTKLGFASNNKIEGALLNLYAKC 437
Query: 526 GRVHEAEDFINQMAFDDDIVVWK-----------------------------------SL 550
+ A D+ + +++V+W S+
Sbjct: 438 ADIETALDYFLETEV-ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 551 LASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGK----WEEVARLMG 602
L +C G++++G++ I+K + N+ +L ++YA GK W+ + R G
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 170/370 (45%), Gaps = 33/370 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A +++ F + W + + + N ++AL F + + R + +
Sbjct: 541 LDTAWDILIRFAGKDVVSWT-TMIAGYTQYNFDDKALTTFRQMLDR-GIRSDEVGLTNAV 598
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ L++L+ G+++H S D N ++ +Y +CG +E++ + F++ + +
Sbjct: 599 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W A+++G Q+G A+ ++V+M + G+ + FTFGS ++A S + G+Q+HA +
Sbjct: 659 AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 718
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
K+ + S NALI+MY K I DA F
Sbjct: 719 TKTGYDSETEVCNALISMYAKCGSISDA----------------------------EKQF 750
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
E+ + N SWN II + +EA+ F +M + P+ +T+ +L AC+ +
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 328 QGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G+ + + S P VC + +AG L R + KPD + + ++ A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 385 CAAMASLEMG 394
C ++E+G
Sbjct: 871 CVVHKNMEIG 880
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/615 (32%), Positives = 313/615 (50%), Gaps = 97/615 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
L S L +Q N AL F + + +P T A L+SAC+S+ +L G++ H + +
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQ---KPDCVTVASLLSACASVGALPNGKQFHSYAI 379
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ D V+ +L++Y KC ++ A F Q + + N + +
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNL---------------NKSFQ 424
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
++ QM G++P+QFT+ SI++ C+ L LG Q+H V+K+ ++ + LI MY
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 484
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K KLD A +F ++ ++ SW +IAG
Sbjct: 485 KH----------------------------GKLDHALKIFRRLKENDVVSWTAMIAGYTQ 516
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
EA++LF EM D+ + D + S + AC +L QG QIH+ G+ ++ +
Sbjct: 517 HDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSI 576
Query: 348 CNAILQ---------------------------------HQAG---ELFRLFSLMLASQT 371
NA++ Q+G E +F+ M +
Sbjct: 577 GNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGL 636
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+ + TF + A A +A++ +G Q+H I KTG + V N L+ +Y KCG++
Sbjct: 637 EINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI----- 691
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
D +SW+S+I GY+Q GCG EALKLF M+ V PNHVT VGVL+ACSHVGL
Sbjct: 692 --------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGL 743
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
V+EG+ +R M + ++P E +CVVDLL R+G + A+ F+ +M D +VW++LL
Sbjct: 744 VDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLL 803
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
++C H N+D+G+ AA ++L+++P +SA VL+ N+YA SGKW+ R MK+RGV+K
Sbjct: 804 SACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKK 863
Query: 612 VPGQSWIEIQTKIHA 626
PG+SW+E+ +HA
Sbjct: 864 EPGRSWVEVDNSVHA 878
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 249/511 (48%), Gaps = 68/511 (13%)
Query: 70 LQNNTNFRIRPSTYADLISACS-SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC 128
L N F R +A ++ CS + S + ++H ++S + + N ++++Y K
Sbjct: 155 LTKNVEFDER--IFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKN 212
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G L A+ VF+ + R+ VSW AMI+G SQNG E A+ L+ Q+ ++
Sbjct: 213 GFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VL 258
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
AC+ + G+QLH V+K S NAL+ +Y++ + A +F ++++D
Sbjct: 259 SACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD-- 316
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
S+N++I+G+A N A++LF +M P
Sbjct: 317 --------------------------RVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----------HQ-- 355
D +TV SLL AC S +L G Q HSY IK G S++ V ++L H+
Sbjct: 351 DCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF 410
Query: 356 --AGEL------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
G+L F++F+ M P+ T+ ++ C + + ++G Q+H ++KTG
Sbjct: 411 LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQ 470
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+V+V + L+DMY K G L A ++F +++ DVVSW+++I GY Q EAL LF+ M
Sbjct: 471 FNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEM 530
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
+ G++ +++ ++AC+ + +++G Q++ G + +V L AR G+
Sbjct: 531 QDQGIKSDNIGFASAISACAGIQALDQGRQIH-AQSCLSGYSDDLSIGNALVSLYARCGK 589
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
V EA +Q+ + D V W SL++ G
Sbjct: 590 VREAYAAFDQI-YAKDNVSWNSLVSGFAQSG 619
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 173/402 (43%), Gaps = 54/402 (13%)
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
F L+ A VF+EM +L+ WN I + LF M + + D
Sbjct: 109 AFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAV 168
Query: 316 LLCACT-SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
+L C+ + +S QIH+ I GF S+ +CN ++ +L+ + +++ +
Sbjct: 169 VLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLI-----DLYFKNGFLSSAKKVFE 223
Query: 375 HITFND---------------------------VMGACAAMASLEMGTQLHCYIMKTGLA 407
++ D V+ AC + E G QLH ++K G +
Sbjct: 224 NLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFS 283
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+ +V N L+ +Y + G+L SA ++F+ M D VS++SLI G AQ G AL LF++M
Sbjct: 284 SETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKM 343
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
+P+ VT+ +L+AC+ VG + G Q + + G+ ++DL +
Sbjct: 344 NLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI-KAGMTSDIVVEGSLLDLYVKCSD 402
Query: 528 VHEAEDF----------------INQMAFDDDI---VVWKSLLASCKTHGNVDVGKRAAE 568
+ A +F QM + + + S+L +C T G D+G++
Sbjct: 403 IKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHT 462
Query: 569 NILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+LK N +L ++YA GK + ++ +KE V
Sbjct: 463 QVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDV 504
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 324/637 (50%), Gaps = 67/637 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L + + D L +W+ L S K Y E++ F+ +Q R T+
Sbjct: 105 CGDLVKGRRIFDGILNDKIFLWNL-LMSEYAKIGNYRESVGLFEKMQE-LGIRGDSYTFT 162
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ ++ ++ ++VH ++L + N ++ Y KCG +E AR++FDE+ R
Sbjct: 163 CVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDR 222
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+VVSW +MI+GC+ NG +E ++QML G+ D T +++ AC+ + + LGR LH
Sbjct: 223 DVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALH 282
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
A+ +K+ ++ N L+ MY+K + A VF + I SW S
Sbjct: 283 AYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTS------------ 330
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
IIA EA+ LF EM + L PD V S++ AC
Sbjct: 331 ----------------IIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSN 374
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------------------- 356
SL +G ++H++I K SN+PV NA++ A
Sbjct: 375 SLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIG 434
Query: 357 --------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
E +LF L + Q KPD +T V+ ACA +A+LE G ++H +I++ G
Sbjct: 435 GYSQNSLPNEALQLF-LDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFS 493
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ V L+DMYVKCG L A++LF+ + D++ W+ +I GY G G+EA+ F +MR
Sbjct: 494 DLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMR 553
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+G+ P + +L AC+H GL++EG +L+ M++E I P E +C+VDLL R+G +
Sbjct: 554 VAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNL 613
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
A FI M D +W +LL+ C+ H +V++ ++ AE+I +++P N+ VLL N+Y
Sbjct: 614 SRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVY 673
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A + KWEEV ++ + + G++ G SWIE+Q K +
Sbjct: 674 AEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFN 710
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 213/651 (32%), Positives = 328/651 (50%), Gaps = 76/651 (11%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDL--FSSLCKQNLYN--EALVAFDFLQNNTNFR 77
+ C L A +V D+ R W+ L +++ N N E L F L+ +
Sbjct: 122 YSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGST 181
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
R T A ++ C + L VH + + + D + ++N+Y KCG + DAR++
Sbjct: 182 TR-MTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLL 240
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLC 195
FD M +R+VV W M+ G Q G E A +L+ + +SGL PD+F+ I+ C +G
Sbjct: 241 FDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTD 300
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ LG+Q+H +KS S + N+L+ MY+K
Sbjct: 301 DLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAY---------------------- 338
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
FAR VFN+M+ +L SWN++I+ A S E+++LF ++ L PD T+ S
Sbjct: 339 ------FAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 392
Query: 316 LLCA-----CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELF-- 360
+ A C + L QG QIH++ IK GF S++ V + IL AG +F
Sbjct: 393 ITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNY 452
Query: 361 --------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
R++ M S+ PD TF ++ A + + +LE G
Sbjct: 453 ISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQG 512
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
QLH ++K D FV L+DMY KCG++ A LF M ++ W++++VG AQ
Sbjct: 513 RQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQH 572
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G EEA+ LF+ M+S G+ P+ V+ +G+L+ACSH GL E + M N+YGI P E
Sbjct: 573 GNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEH 632
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
SC+VD L RAG V EA+ I M F + ++LL +C+ G+V+ GKR A + ++
Sbjct: 633 YSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALE 692
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
P +SAA VLL NIYA++ +W++V MK + V+K PG SWI+++ +H
Sbjct: 693 PFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLH 743
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 236/526 (44%), Gaps = 82/526 (15%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+ S +L LG+ H I+ S D L N++L MY KCGSL AR VFD P+R+
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 146 VVSWTAMIAGC-----SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+V+W A++ S +G + L+ + S + T +++ C C+
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+H + IK + AL+ +Y+K R+ DA +F + +D+ W M+ G+ +L
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ EA LFSE L PD +V+ +L C
Sbjct: 263 GLEK----------------------------EAFQLFSEFHRSGLRPDEFSVQLILNGC 294
Query: 321 ----TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF-------- 360
T L L G Q+H +K G S+V V N+++ + A E+F
Sbjct: 295 LWAGTDDLEL--GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 352
Query: 361 --------------------RLFSLMLASQTKPDH-----ITFNDVMGACAAMASLEMGT 395
LF +L KPDH IT AC + L+ G
Sbjct: 353 ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGK 412
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H + +K G D+ V +G++DMY+KCG + +A +FN++ PD V+W+S+I G G
Sbjct: 413 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 472
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
++AL+++ RMR S V P+ T ++ A S V +E+G QL+ + + +
Sbjct: 473 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI-KLDCVSDPFVG 531
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ +VD+ A+ G + +A +M +I +W ++L HGN +
Sbjct: 532 TSLVDMYAKCGNIEDAYRLFKKMNV-RNIALWNAMLVGLAQHGNAE 576
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 198/584 (33%), Positives = 314/584 (53%), Gaps = 74/584 (12%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N IL+ Y K G LE A VFD +P R+ VSWT +I G +Q G+ AI+++V M++ ++
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P QFT +++ +C+ G+G+++H+ V+K + + N+L+ MY K + A V
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164
Query: 239 FSSIARKDITSWGSMID---GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + ++ +SW +MI ++D A F + ++ SWN++IAG NEA+
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224
Query: 296 SLFSE-MGDRELIPD------------------------GLTVRSLLCAC----TSPLSL 326
FS + D L PD G VR++ A + +S+
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284
Query: 327 YQ---GMQIHSYIIKKGFYSNVPVC--NAILQ--------HQAGELF------------- 360
Y G++I II++ S++ V A+L A ++F
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344
Query: 361 ---------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+F M++ +P+ T ++ A +++ SL G Q+H +++G
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKLF 464
AL V N L MY K GS+ AR++FN + ++ D VSW+S+I+ AQ G GEEA++LF
Sbjct: 405 EALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELF 464
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M + G++P+H+T VGVL+AC+H GLVE+G + +M+N + I PT +C+VDL R
Sbjct: 465 EQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGR 524
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + EA F+ M + D++ W SLL+SCK + NVD+ K AAE +L I+P NS A L
Sbjct: 525 AGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSAL 584
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
N+Y+S GKW++ A++ MK RGV+K G SW++IQ K H G
Sbjct: 585 ANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFG 628
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 242/489 (49%), Gaps = 75/489 (15%)
Query: 117 LHNHILNMYGKC-------------------------------GSLEDARMVFDEMPQRN 145
L N+++N+Y K G LE A VFD +P R+
Sbjct: 12 LMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRD 71
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VSWT +I G +Q G+ AI+++V M++ ++P QFT +++ +C+ G+G+++H+
Sbjct: 72 SVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHS 131
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID---GFSKLDF 262
V+K + + N+L+ MY K + A VF + ++ +SW +MI ++D
Sbjct: 132 FVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDL 191
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE-MGDRELIPDGLTVRSLLCACT 321
A F + ++ SWN++IAG NEA+ FS + D L PD ++ S L AC
Sbjct: 192 ALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACA 251
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
+ L G QIH YI++ F ++ V NA++ A
Sbjct: 252 NLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKS----------------------- 288
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
+E+ ++ I ++G++ LDV L++ YVK G + AR++FN ++DPD
Sbjct: 289 -------GGVEIARRI---IEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPD 338
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY- 499
VV+W+++IVGY Q G +A+++F+ M S G RPN TL +L+A S V + G Q++
Sbjct: 339 VVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHA 398
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+++ + P+ + + + A+AG ++ A N + + D V W S++ + HG
Sbjct: 399 SAIRSGEALSPSVG--NALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG- 455
Query: 560 VDVGKRAAE 568
+G+ A E
Sbjct: 456 --LGEEAIE 462
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 212/522 (40%), Gaps = 120/522 (22%)
Query: 35 VDSFLRRFDDIWDFDLFS-----SLCKQNLY-NEALVAFDFLQNNTNFRIRPSTYADLIS 88
VD L +F+ + + D+ S + C Q+ + NEAL F + +T+ + + A +S
Sbjct: 189 VDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALS 248
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE---------------- 132
AC++L L G+++H +I+ + + N +++MY K G +E
Sbjct: 249 ACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDV 308
Query: 133 -----------------DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
AR +F+ + +VV+WTAMI G QNG N AIE++ M+
Sbjct: 309 IAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSE 368
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G P+ FT +++ A S + + G+Q+HA I+S NAL MY K I A
Sbjct: 369 GPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGA 428
Query: 236 WNVFSSIAR-KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
VF+ + + +D SW SM I +A EA
Sbjct: 429 RKVFNLLRQNRDTVSWTSM----------------------------IMALAQHGLGEEA 460
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+ LF +M + PD +T +L ACT + QG SY NV + L H
Sbjct: 461 IELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQG---RSYF---DLMKNVHKIDPTLSH 514
Query: 355 ---------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+AG L + + +PD I + ++ +C ++++
Sbjct: 515 YACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAK---------- 564
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
A E +E + ++S+L Y+ G ++A K+ +
Sbjct: 565 ----------------------VAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRK 602
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGL-----QLYRIM 502
M++ GV+ + +HV VE+GL ++Y++M
Sbjct: 603 LMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMM 644
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 185/402 (46%), Gaps = 55/402 (13%)
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLA 276
N L+ +Y K LDA ++F+ + K SW +++ G++ KL+ A VF+ + +
Sbjct: 14 NNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSV 73
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
SW TII G +A+ +F +M +++P T+ ++L +C + S G ++HS++
Sbjct: 74 SWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFV 133
Query: 337 IKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+K G ++ VPV N++L A G+L K + F+
Sbjct: 134 VKLGLHACVPVANSLLNMYAKTGDL------------KMAKVVFDR-------------- 167
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
MK + N ++ +++ CG + A F + + D+VSW+S+I G Q
Sbjct: 168 -------MKL---RNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQH 217
Query: 455 GCGEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGII 509
G EAL+ F ++ + ++P+ +L L+AC+++ + G Q++ R M + G +
Sbjct: 218 GFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAV 277
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDD-DIVVWKSLLASCKTHGNVDVGKRAAE 568
+ ++ + A++G V A I Q D D++ + +LL G++ R
Sbjct: 278 G-----NALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDI-TPARQIF 331
Query: 569 NILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
N LK DP A ++ Y +G + + +M G R
Sbjct: 332 NSLK-DPDVVAWTAMIVG-YVQNGLNNDAIEVFKTMVSEGPR 371
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 51/218 (23%)
Query: 391 LEMGTQLHCYIM--------KTGLALD------------VFVMNGLMDMYVKCGSLGSAR 430
+++G Y+M KTG LD F N ++ Y K G L A
Sbjct: 2 VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
++F+ + D VSW+++IVGY Q G E+A+K+F M V P TL VL +C+ G
Sbjct: 62 QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF---------- 540
G +++ + + G+ + ++++ A+ G + A+ ++M
Sbjct: 122 SRGIGKKVHSFVV-KLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 541 --------------------DDDIVVWKSLLASCKTHG 558
+ DIV W S++A C HG
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHG 218
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 197/623 (31%), Positives = 311/623 (49%), Gaps = 96/623 (15%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ TY ++ C+ L+S G+KVH I S+ D L +++ Y CG L++ R V
Sbjct: 97 LETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRV 156
Query: 138 FDEMPQRNV--------------------------------------------------- 146
FD M ++NV
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDV 216
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW +MI+G NG + +Y QM+ G+ D T S++ C+ + LG+ +H+
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
IKS + N L+ MY+K LD A V
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKC----------------------------GDLDGALRV 308
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F +M N+ SW ++IAG ++ A+ L +M + D + + S+L AC SL
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL---FRLFSLMLAS----------QT 371
G +H YI SN+ VCNA++ A G + +FS M+ +
Sbjct: 369 DNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL 428
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
KPD T V+ ACA++++LE G ++H YI++ G + D V N L+D+YVKCG LG AR
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
LF+ + D+VSW+ +I GY G G EA+ F MR +G+ P+ V+ + +L ACSH GL
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+E+G + + IM+N++ I P E +C+VDLL+R G + +A +F+ + D +W +LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALL 608
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
C+ + ++++ ++ AE + +++P N+ VLL NIYA + KWEEV RL + ++G+RK
Sbjct: 609 CGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRK 668
Query: 612 VPGQSWIEIQTKIH--ASGNDIS 632
PG SWIEI+ K++ SGN+ S
Sbjct: 669 NPGCSWIEIKGKVNLFVSGNNSS 691
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 189/420 (45%), Gaps = 71/420 (16%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTNFR--------------IRPSTYADLISACSSL 93
F+LF LC +++ + + ++ N R + +T ++ C++
Sbjct: 205 FELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANS 264
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+L LG+ VH + S + N +L+MY KCG L+ A VF++M +RNVVSWT+MI
Sbjct: 265 GTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMI 324
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AG +++G+ + AI+L QM + G+ D SI+ AC+ + G+ +H ++ +
Sbjct: 325 AGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNME 384
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI------------------- 254
S+L NAL+ MY K + A +VFS++ KDI SW +MI
Sbjct: 385 SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACAS 444
Query: 255 ----------------DGFSK-----------------LDFARTVFNEMESPNLASWNTI 281
+G+S L AR +F+ + S +L SW +
Sbjct: 445 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 504
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
IAG NEA++ F+EM D + PD ++ S+L AC+ L QG + YI+K F
Sbjct: 505 IAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDF 563
Query: 342 YSNVPV----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+ C L + G L + + M PD + ++ C +E+ ++
Sbjct: 564 NIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKV 623
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 206/473 (43%), Gaps = 86/473 (18%)
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V + A I Q G A+EL +S L + T+GS+++ C+GL G+++H+
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELICMCQKSEL--ETKTYGSVLQLCAGLKSFTDGKKVHS 123
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL-DFAR 264
+ + G L++ Y + + VF ++ +K++ W M+ ++K+ DF
Sbjct: 124 IIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 265 TV----------------------FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
++ F+++ ++ SWN++I+G S + ++ +M
Sbjct: 184 SICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL- 359
+ D T+ S+L C + +L G +HS IK F + N +L + G+L
Sbjct: 244 YLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 360 --FRLF-----------SLMLASQT--------------------KPDHITFNDVMGACA 386
R+F + M+A T K D + ++ ACA
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
SL+ G +H YI + ++FV N LMDMY KCGS+ +A +F+ M D++SW++
Sbjct: 364 RSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNT 423
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNE 505
+I GE ++P+ T+ VL AC+ + +E G +++ I++N
Sbjct: 424 MI--------GE-------------LKPDSRTMACVLPACASLSALERGKEIHGYILRNG 462
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
Y R + +VDL + G + A + M D+V W ++A HG
Sbjct: 463 YS--SDRHVANALVDLYVKCGVLGLAR-LLFDMIPSKDLVSWTVMIAGYGMHG 512
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 130/256 (50%), Gaps = 13/256 (5%)
Query: 63 ALVAFDFLQNNTNF-RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+V D + NT ++P T A ++ AC+SL +L+ G+++H +IL + D + N
Sbjct: 412 TMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVAN 471
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++++Y KCG L AR++FD +P +++VSWT MIAG +G N AI + +M +G+ P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 531
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWN 237
D+ +F SI+ ACS + G + +++K++ L ++ + ++ + A+
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 238 VFSSIA-RKDITSWGSMIDG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASCSN 290
++ D T WG+++ G + ++ A V E+E N + + A
Sbjct: 591 FMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 291 ANEAMSLFSEMGDREL 306
E L ++G + L
Sbjct: 651 WEEVKRLREKIGKQGL 666
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 109/271 (40%), Gaps = 64/271 (23%)
Query: 349 NAILQH--QAGELFRLFSLM-LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
NA + H Q G+L L+ + +++ + T+ V+ CA + S G ++H I
Sbjct: 70 NAKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNS 129
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFME---------------------------- 437
+ +D + L+ Y CG L R +F+ ME
Sbjct: 130 VGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFK 189
Query: 438 -----------------------DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
D DV+SW+S+I GY G E L ++++M G+
Sbjct: 190 IMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDV 249
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR----SCVVDLLARAGRVHE 530
+ T++ VL C++ G + G ++ + I + ERR + ++D+ ++ G +
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSL-----AIKSSFERRINFSNTLLDMYSKCGDLDG 304
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
A +M + ++V W S++A G D
Sbjct: 305 ALRVFEKMG-ERNVVSWTSMIAGYTRDGRSD 334
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/600 (32%), Positives = 309/600 (51%), Gaps = 65/600 (10%)
Query: 63 ALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
AL AF + + T+ L+ C++ L GR VH + + P+A+ +
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQ 181
NMY KC DAR VFD MP R+ V+W A++AG ++NG AA+ + V+M + G PD
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T S++ AC+ +G R++HA ++ + A++ +Y K +
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAV--------- 378
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
D AR VF+ M+ N SWN +I G A +A EA++LF M
Sbjct: 379 -------------------DSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRM 419
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ------ 355
+ ++V + L AC L +G ++H +++ G SNV V NA++
Sbjct: 420 VGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRT 479
Query: 356 --AGELF----------------------------RLFSLMLASQTKPDHITFNDVMGAC 385
A ++F RLFS M KPD T ++ A
Sbjct: 480 DLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPAL 539
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A ++ +H Y ++ L DV+V+ L+DMY KCG + AR LFN D V++W+
Sbjct: 540 ADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWN 599
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
++I GY G G+ A++LF M+SSG PN T + VL+ACSH GLV+EG + + M+ +
Sbjct: 600 AMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKED 659
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
YG+ P E +VDLL RAG++HEA FI +M + I V+ ++L +CK H NV++ +
Sbjct: 660 YGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEE 719
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+A+ I +++P VLL NIYA++ W++VAR+ +M+++G++K PG S ++++ +IH
Sbjct: 720 SAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIH 779
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
G L ++ AS + P TF ++ CAA A L G +H + GL+ + L
Sbjct: 207 GALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATAL 266
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS-GVRPN 475
+MY KC G AR +F+ M D V+W++L+ GYA+ G E A+ + RM+ G RP+
Sbjct: 267 ANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPD 326
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
VTLV VL AC+ + +++ G + ++D+ + G V A
Sbjct: 327 AVTLVSVLPACADAQALGACREVHAFAVRG-GFDEQVNVSTAILDVYCKCGAVDSARKVF 385
Query: 536 NQMAFDDDIVVWKSLLASCKTHGN 559
+ M D + V W +++ +G+
Sbjct: 386 DGMQ-DRNSVSWNAMIKGYAENGD 408
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C D A +V D + W+ + C QN +E V N + T
Sbjct: 476 CKRTDLAAQVFDELGYKTRVSWNAMILG--CTQNGSSEDAVRLFSRMQLENVKPDSFTLV 533
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+I A + + R +H + + D + +++MY KCG + AR +F+ R
Sbjct: 534 SIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR 593
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V++W AMI G +G A+EL+ +M SG +P++ TF S++ ACS V G++
Sbjct: 594 HVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYF 653
Query: 205 AHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
+ +K ++G + ++ + + ++ +AW+ + I+ +G+M+
Sbjct: 654 SS-MKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAML 705
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 290/584 (49%), Gaps = 64/584 (10%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ P +Y L AC ++SL GR H+ + + P L N +L MY KCGSL DAR V
Sbjct: 8 VSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKV 67
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FDEM +RN+VSW +I+ ++NG + ++ ML+ P+ T+ +R+ +
Sbjct: 68 FDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGL 127
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
+G+Q+H+H I+S GS+ A+ MY K W
Sbjct: 128 EIGKQIHSHAIRSGLGSNASVNTAISNMYVK-------------------CGW------- 161
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
L+ A VF +M N +W I+ G +A++LF++M + + D +L
Sbjct: 162 --LEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVL 219
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------------- 354
AC L G QIH +I+K G S V V ++
Sbjct: 220 KACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDV 279
Query: 355 ----------QAGEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
Q GE + F + + T+ + AC+A+A G Q H
Sbjct: 280 SWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADA 339
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K+ L + ++ MY +CG L A +F ++DPD V+W+++I GYA G EAL
Sbjct: 340 IKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEAL 399
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
KLFRRM+ GVRPN VT + VLTACSH GLV EG Q M + YG+ T + C+VD+
Sbjct: 400 KLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDI 459
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
+RAG + EA + I M F D + WK LL C T+ N+++G+ AAEN+ ++DP ++A
Sbjct: 460 YSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGY 519
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+L+ N+YAS GKW+E A + M ER +RK SWI ++ K+H
Sbjct: 520 ILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVH 563
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 178/424 (41%), Gaps = 66/424 (15%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M +G+ ++ + AC + + GR H + ++ +N+++ MY K
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ DA VF + +++ S WNTII+ A
Sbjct: 61 LADARKVFDEMRERNLVS----------------------------WNTIISAYAENGVF 92
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
++ +FS M + E P+G T L + +P L G QIHS+ I+ G SN V AI
Sbjct: 93 DKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAI 152
Query: 352 LQH-------QAGEL-----------------------------FRLFSLMLASQTKPDH 375
+ EL LF+ M+ + D
Sbjct: 153 SNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDE 212
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
F+ V+ ACA + L G Q+H +I+K GL +V V L+D YVKC +L SA + F +
Sbjct: 213 YVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEW 272
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+ +P+ VSWS+LI GY Q G EEALK F +R+ V N T + ACS + G
Sbjct: 273 ISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSG 332
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
Q + ++ + S ++ + +R GR+ A + D D V W +++A
Sbjct: 333 AQAHADAIKS-SLVAYQHGESAMITMYSRCGRLDYATRVFESID-DPDAVAWTAIIAGYA 390
Query: 556 THGN 559
GN
Sbjct: 391 YQGN 394
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 197/453 (43%), Gaps = 92/453 (20%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--ST 82
C L A +V D R W+ + S+ + ++++ F N +P ST
Sbjct: 58 CGSLADARKVFDEMRERNLVSWN-TIISAYAENGVFDKGFCMF---SNMLELETKPNGST 113
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y + + + L++G+++H H + S +A ++ I NMY KCG LE A +VF++M
Sbjct: 114 YIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMS 173
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
++N V+WT ++ G +Q ++ A+ L+ +M+ G+ D++ F +++AC+GL + GRQ
Sbjct: 174 EKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQ 233
Query: 203 LHAHVIKSEHGSHL-------------------------------ISQNALIAMYTKFDR 231
+H H++K S + +S +ALI Y +
Sbjct: 234 IHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGE 293
Query: 232 ILDAWNVFSSIARK--DITSW-------------------------------------GS 252
+A F S+ + DI S+ +
Sbjct: 294 FEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESA 353
Query: 253 MIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
MI +S+ LD+A VF ++ P+ +W IIAG A NA EA+ LF M D + P+
Sbjct: 354 MITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPN 413
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGELFR 361
+T ++L AC+ + G+ I + SN V I + +AG L
Sbjct: 414 AVTFIAVLTACS-----HSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQE 468
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
L+ + PD +++ ++G C +LE+G
Sbjct: 469 ALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIG 501
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/619 (31%), Positives = 323/619 (52%), Gaps = 63/619 (10%)
Query: 43 DDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D+ F LCK + AL + + +P YA L+ C+ + + G ++
Sbjct: 23 DNTNPFSKILQLCKSGELSGALQLLKSI-DPGEISAKPVLYASLLQTCTKVLAFNHGLQI 81
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGS-LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQ 161
H H++ S + D + N +L +Y K G+ + R VFD + ++V+SWT+MI+G + G+
Sbjct: 82 HAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGK 141
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
++EL+ +ML G+ P+ FT ++I+ACS L + LGR H V+ S+ + +A
Sbjct: 142 PMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASA 201
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTI 281
LI M+ + LD AR +F+E+ P+ W +I
Sbjct: 202 LIDMHGRN----------------------------CALDDARQLFDELLEPDAICWTSI 233
Query: 282 IAGVASCSNANEAMSLFSEMG-DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
I+ + +EA+ F M D + PDG T ++L AC + L QG ++H+ +I G
Sbjct: 234 ISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTG 293
Query: 341 FYSNVPVCNAILQ-----HQAGELFRLFSLM---------------------------LA 368
F NV V ++++ GE R+F M
Sbjct: 294 FCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFR 353
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
K D F ++ CA +A++ G ++HC ++ G DV V + L+D+Y KCG +
Sbjct: 354 KMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEY 413
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A+ +F+ M ++++W+S+I G+AQ G GEEAL++F +M G++P++++ +G+L ACSH
Sbjct: 414 AQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSH 473
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLV+EG + + M +YGI E SC+VDLL RAG + EAE I F DD +W
Sbjct: 474 RGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWA 533
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL +C T N ++ +R A+ +++++P + VLL N+Y + G+W + R+ MK+RG
Sbjct: 534 ALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRG 593
Query: 609 VRKVPGQSWIEIQTKIHAS 627
V K+PG+SWIE + + +S
Sbjct: 594 VNKMPGKSWIETKNNLGSS 612
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/619 (31%), Positives = 323/619 (52%), Gaps = 63/619 (10%)
Query: 43 DDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D+ F LCK + AL + + +P YA L+ C+ + + G ++
Sbjct: 82 DNTNPFSKILQLCKSGELSGALQLLKSI-DPGEISAKPVLYASLLQTCTKVLAFNHGLQI 140
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGS-LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQ 161
H H++ S + D + N +L +Y K G+ + R VFD + ++V+SWT+MI+G + G+
Sbjct: 141 HAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGK 200
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
++EL+ +ML G+ P+ FT ++I+ACS L + LGR H V+ S+ + +A
Sbjct: 201 PMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASA 260
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTI 281
LI M+ + LD AR +F+E+ P+ W +I
Sbjct: 261 LIDMHGRN----------------------------CALDDARQLFDELLEPDAICWTSI 292
Query: 282 IAGVASCSNANEAMSLFSEMG-DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
I+ + +EA+ F M D + PDG T ++L AC + L QG ++H+ +I G
Sbjct: 293 ISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTG 352
Query: 341 FYSNVPVCNAILQ-----HQAGELFRLFSLM---------------------------LA 368
F NV V ++++ GE R+F M
Sbjct: 353 FCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFR 412
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
K D F ++ CA +A++ G ++HC ++ G DV V + L+D+Y KCG +
Sbjct: 413 KMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEY 472
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A+ +F+ M ++++W+S+I G+AQ G GEEAL++F +M G++P++++ +G+L ACSH
Sbjct: 473 AQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSH 532
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLV+EG + + M +YGI E SC+VDLL RAG + EAE I F DD +W
Sbjct: 533 RGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWA 592
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL +C T N ++ +R A+ +++++P + VLL N+Y + G+W + R+ MK+RG
Sbjct: 593 ALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRG 652
Query: 609 VRKVPGQSWIEIQTKIHAS 627
V K+PG+SWIE + + +S
Sbjct: 653 VNKMPGKSWIETKNNLGSS 671
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 215/682 (31%), Positives = 341/682 (50%), Gaps = 104/682 (15%)
Query: 18 YWDAFELCMLLDQAG---EVVDSFLR--RFDDIWDFDLF---SSLCKQNLYNEALVAFDF 69
Y F+ CM+L AG +V D ++ R +I++ + S+C L EA FD
Sbjct: 64 YVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNML--EARQTFDS 121
Query: 70 LQNNTN----------------------FR------IRPS--TYADLISACSSLRSLQLG 99
++N T FR + PS T+ ++ ACSS L+LG
Sbjct: 122 VENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLG 181
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
++ H ++ D + +++MY K GS++ AR VFD + +R+V ++ MI G +++
Sbjct: 182 KEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKS 241
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G A +L+ +M Q G P++ +F SI+ CS + G+ +HA + + +
Sbjct: 242 GDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVA 301
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
ALI MY G ++ AR VF++M+ ++ SW
Sbjct: 302 TALIRMYM----------------------------GCGSIEGARRVFDKMKVRDVVSWT 333
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+I G A SN +A LF+ M + + PD +T ++ AC S L +IHS +++
Sbjct: 334 VMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRA 393
Query: 340 GFYSNVPVCNAILQHQAG------------------------------------ELFRLF 363
GF +++ V A++ A E F F
Sbjct: 394 GFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETF 453
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
LM + +PD +T+ +++ AC + +L++G +++ +K L + V N L++M VK
Sbjct: 454 HLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKH 513
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
GS+ AR +F M DVV+W+ +I GY+ G EAL LF RM RPN VT VGVL
Sbjct: 514 GSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVL 573
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
+ACS G VEEG + + + + GI+PT E C+VDLL RAG + EAE IN+M +
Sbjct: 574 SACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPN 633
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+W +LLA+C+ +GN+DV +RAAE L +P + A V L ++YA++G WE VA++
Sbjct: 634 SSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKV 693
Query: 604 MKERGVRKVPGQSWIEIQTKIH 625
M+ RGVRK G +WIE++ K+H
Sbjct: 694 MESRGVRKEQGCTWIEVEGKLH 715
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/573 (27%), Positives = 266/573 (46%), Gaps = 74/573 (12%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
I TY L C LR LG++V DHI+ S Q + N ++ ++ CG++ +AR
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD + + VV+W A+IAG +Q G A L+ QM+ + P TF ++ ACS +
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG++ HA VIK S AL++MY K + A VF + ++D++++ MI G+
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+K + +A LF M P+ ++ S+L
Sbjct: 239 AK----------------------------SGDGEKAFQLFYRMQQEGFKPNRISFLSIL 270
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-------------------- 357
C++P +L G +H+ + G +V V A+++ G
Sbjct: 271 DGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVV 330
Query: 358 ----------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ F LF+ M +PD IT+ ++ ACA+ A L + ++H +
Sbjct: 331 SWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQV 390
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ G D+ V L+ MY KCG++ AR++F+ M DVVSWS++I Y + GCGEEA
Sbjct: 391 VRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAF 450
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR--IMQNEYGIIPTRERRSCVV 519
+ F M+ + V P+ VT + +L AC H+G ++ G+++Y I + IP + ++
Sbjct: 451 ETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPV---GNALI 507
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTN 577
++ + G + A +I + D+V W ++ HGN + +LK P N
Sbjct: 508 NMNVKHGSIERAR-YIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRP-N 565
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKE-RGV 609
S V + + + +G EE R + + RG+
Sbjct: 566 SVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGI 598
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 297/578 (51%), Gaps = 68/578 (11%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P LI CS ++L+ G +H + + + D ++ NHILN+Y KC L +AR VFD
Sbjct: 3 PELVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFD 62
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EM +RN+VSW+AMI+G Q G+ +A+ L+ ++ ++P+++ + S+I AC+ L +
Sbjct: 63 EMSERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQ 119
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+Q+H +K S NALI MY K + DA
Sbjct: 120 GKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDAL----------------------- 156
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+NE N ++N +I G ++ + M PD T LL
Sbjct: 157 -----LAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGT 211
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGELFR---------- 361
C S L +G +H IK S + N I L +A + FR
Sbjct: 212 CNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISW 271
Query: 362 ------------------LFSLMLAS-QTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
F ML + +PD TF + AC+ +AS+ G Q+H +++
Sbjct: 272 NTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLI 331
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+T L DV N L++MY KCG + A +F+ ME ++VSW+++I G+ G G +A +
Sbjct: 332 RTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFE 391
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF +M++ GV+P+ VT VG+LTA +H GLV+EGL + M+ YGI P E SC++DLL
Sbjct: 392 LFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLL 451
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAGR++EA++++ + F D VV SLL++C+ HG+VD GK A +LK+ P ++ V
Sbjct: 452 GRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYV 511
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
LL N+YAS W+ VA +K G++K PG S IE+
Sbjct: 512 LLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEV 549
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQ-NLYNEALVAFDFLQNNTNFRIRPSTYAD 85
LL++A + S + D+ ++ F S C N + +AL AF + N R T+A
Sbjct: 252 LLEEAEKAFRSIEEK--DLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFAS 309
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ACS L S+ G+++H H++ ++ D N ++NMY KCG + A +F +M +N
Sbjct: 310 ALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQN 369
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGL 199
+VSW MIAG +G A EL+ +M G+ PD TF ++ A +GL GL
Sbjct: 370 LVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGL 425
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 312/601 (51%), Gaps = 68/601 (11%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
E + + L N ++ S++ +SAC + G++VH + + D +H +
Sbjct: 223 ENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSL 282
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
L MYGKC +E A VF+E+P + + W A+I+ NG A+ +Y QM ++ D
Sbjct: 283 LTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDS 342
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
FT +++ + S LGR +H ++K S + Q+AL+ MY+KF A ++FS+
Sbjct: 343 FTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFST 402
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA--NEAMSLFS 299
+ +D+ +WGS+I GF C N EA+ F
Sbjct: 403 MKERDVVAWGSVISGF------------------------------CQNRKYKEALDFFR 432
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------ 353
M + PD + S++ ACT + G IH ++IK G +V V +++L
Sbjct: 433 AMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFG 492
Query: 354 --HQAGELF----------------------------RLFSLMLASQTKPDHITFNDVMG 383
+AG +F LFS +L + PD ++F V+
Sbjct: 493 FPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLA 552
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
A +++A+L G +H Y+++ + D+ V N L+DMY+KCG L A+ +F + + ++V+
Sbjct: 553 AISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVA 612
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+S+I GY G +A++LF MRSSG++P+ VT + +L++C+H GL+EEGL L+ +M+
Sbjct: 613 WNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMK 672
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
++GI P E +VDL RAG + +A F+ M + D +W SLL SCK H N+++G
Sbjct: 673 MKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELG 732
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+ A +L ++P+ + V L N+Y + W+ A L SMKE+G++K PG SWIE++ K
Sbjct: 733 EMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNK 792
Query: 624 I 624
+
Sbjct: 793 V 793
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/528 (24%), Positives = 239/528 (45%), Gaps = 53/528 (10%)
Query: 53 SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQ 112
SL +Q Y EAL L + TY L+ AC+SL +LQ G+ +H I+++
Sbjct: 30 SLVQQRQYIEALK----LYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLH 85
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQR-----NVVSWTAMIAGCSQNGQENAAIE 167
D + + ++N+Y KCG+ DA VFD++P+ +V W ++I G + GQ +
Sbjct: 86 SDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMV 145
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
+ +M SG G+Q+H++++++ + ALI Y
Sbjct: 146 QFGRMQSSGYKE--------------------GKQIHSYIVRNMLNFDPFLETALIDTYF 185
Query: 228 KFDRILDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT--IIAG 284
K R +A +F + R +I +W MI GF + N +E LA +++
Sbjct: 186 KCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWE---NSLEYYLLAKTENVKVVSS 242
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTV--RSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
+C+ + F G +++ D + V TS L++Y Q+ K +
Sbjct: 243 SFTCTLSACGQGEFVSFG-KQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEK--VF 299
Query: 343 SNVP-----VCNAILQHQAGELFRLFSLMLASQTK-----PDHITFNDVMGACAAMASLE 392
+ VP + NA++ G + +L + Q K D T +V+ + + +
Sbjct: 300 NEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYD 359
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G +H I+K L + + + L+ MY K G A +F+ M++ DVV+W S+I G+
Sbjct: 360 LGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFC 419
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
Q +EAL FR M + V+P+ + +++AC+ + V+ G ++ + G+
Sbjct: 420 QNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKS-GLQLDV 478
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
S ++D+ ++ G A + + M ++V W S++ SC N+
Sbjct: 479 FVASSLLDMYSKFGFPERAGNIFSDMPL-KNLVAWNSII-SCYCRNNL 524
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 319/560 (56%), Gaps = 26/560 (4%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y+ LI C ++S+ K+ H L L N +++ Y KCGS+ AR VFDE+P
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVP 137
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R++V+W +MIA +NG+ AI++Y +M+ G++PD+FTF S+ +A S L V G++
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197
Query: 203 LHAHVIKSEHG-SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS--- 258
H + G S++ +AL+ MY KF ++ DA V + KD+ + ++I G+S
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR---- 314
+ + VF M + + ++ V C E ++ LI GL V+
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLE------DLTSGRLI-HGLIVKAGLE 310
Query: 315 SLLCACTSPLSLY-------QGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL-FSLM 366
S + + TS L++Y +++ I + V ++Q+ E+ L F M
Sbjct: 311 SAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQM 370
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
L S P+ T + V+ AC+++A LE G Q+H +MK GL +D +V L+D Y KCGS
Sbjct: 371 LRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGST 430
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
AR +FN + + DVVS +S+I YAQ G G EAL+LF M+ +G+ PN+VT +GVL+AC
Sbjct: 431 EIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSAC 490
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
++ GL+EEG ++ +N I T++ +C+VDLL RAGR+ EAE INQ+ D+V+
Sbjct: 491 NNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVI 549
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W++LL++C+ HG+V++ KR ++ + P + VLL N+YAS+G W +V + +M+E
Sbjct: 550 WRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMRE 609
Query: 607 RGVRKVPGQSWIEIQTKIHA 626
++K P SW++++ +IH
Sbjct: 610 MRLKKNPAMSWVDVEREIHT 629
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 145/320 (45%), Gaps = 34/320 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + ++ C +L L GR +H I+ + + +L MY +CG ++D+ VF +
Sbjct: 280 TLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQF 339
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
N V+WT++I G QNG+E A+ + QML+S + P+ FT S++RACS L + G+
Sbjct: 340 INPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGK 399
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+HA V+K ALI Y K A +VF+ + D+ S SMI +++
Sbjct: 400 QIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNG 459
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F +EA+ LFS M D L P+ +T +L AC
Sbjct: 460 F----------------------------GHEALQLFSGMKDTGLEPNNVTWLGVLSACN 491
Query: 322 SPLSLYQGMQIHSYIIKKG---FYSNVPVCNAILQHQAGELFRLFSLMLASQTK-PDHIT 377
+ L +G I S G + C L +AG L + ML +Q D +
Sbjct: 492 NAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKE--AEMLINQVNISDVVI 549
Query: 378 FNDVMGACAAMASLEMGTQL 397
+ ++ AC +EM ++
Sbjct: 550 WRTLLSACRIHGDVEMAKRV 569
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 300/545 (55%), Gaps = 20/545 (3%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+IS C R+L+ R + D + + D V N +L+ Y + G +++A+ +FDEMP +N
Sbjct: 117 MISGCVRYRNLRAARLLFDQM----PERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN 172
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+SW M+A QNG+ A L+ L+ G ++ + G+ ++
Sbjct: 173 SISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPE 232
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDF 262
+S N +I+ Y + +L+A +F +D+ +W +M+ G+ + LD
Sbjct: 233 R--------DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDE 284
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR VF+ M N SWN IIAG C ++A LF M + + + +++
Sbjct: 285 ARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVS----SWNTMITGYAQ 340
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDV 381
+ Q + ++ S + Q GE LF M + + TF
Sbjct: 341 NGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTST 400
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ CA +A+LE+G Q+H ++K GL +V N L+ MY KCG++ A +F +E+ +V
Sbjct: 401 LSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEV 460
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
VSW+++I GYA+ G G+EAL LF M+ +G+ P+ VT+VGVL+ACSH GLV++G + +
Sbjct: 461 VSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYS 520
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M +YGI + +C++DLL RAGR+ +A++ + M F+ D W +LL + + HGN +
Sbjct: 521 MTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTE 580
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+G++AA+ I +++P NS VLL N+YA+SG+W +V R+ M++RGV+KVPG SW+E+Q
Sbjct: 581 LGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQ 640
Query: 622 TKIHA 626
KIH
Sbjct: 641 NKIHT 645
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 223/519 (42%), Gaps = 85/519 (16%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP----------DAVLHNHILNMYGK 127
+R S + + S LRSLQ + S++ QP D V N + + +
Sbjct: 3 MRGSNRFRQLHSRSCLRSLQT-TTTANRKPSTRNQPKTTSSLATDADIVKWNIAITNHMR 61
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM----------LQSG- 176
G + A +F+ MP+R+ +SW AMI+GC N + A +L+ +M + SG
Sbjct: 62 NGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGC 121
Query: 177 ----------LMPDQFTFGSIIR---ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
L+ DQ ++ SG G ++ + + IS N ++
Sbjct: 122 VRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAK-EIFDEMPCKNSISWNGML 180
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNT 280
A Y + RI DA +F S A ++ SW M+ G+ K + AR +F+ M + SWNT
Sbjct: 181 AAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNT 240
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I+G A EA LF E R++ T+ +S Y
Sbjct: 241 MISGYAQNGELLEAQRLFEESPVRDVF-----------TWTAMVSGY------------- 276
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
V N +L E R+F M + + +++N ++ ++ +L
Sbjct: 277 ------VQNGMLD----EARRVFDGM----PEKNSVSWNAIIAGYVQCKRMDQAREL--- 319
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ +V N ++ Y + G + AR F+ M D +SW+++I GYAQ G GEEA
Sbjct: 320 -FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEA 378
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVV 519
L LF M+ G R N T L+ C+ + +E G Q++ R+++ G+ + ++
Sbjct: 379 LHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA--GLESGCYVGNALL 436
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + G + +A + + + ++V W +++A HG
Sbjct: 437 VMYCKCGNIDDAY-IVFEGIEEKEVVSWNTMIAGYARHG 474
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 117/208 (56%), Gaps = 12/208 (5%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
R+ ST+ +S C+ + +L+LG++VH ++ + + + N +L MY KCG+++DA +
Sbjct: 391 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYI 450
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + ++ VVSW MIAG +++G A+ L+ M ++G++PD T ++ ACS
Sbjct: 451 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510
Query: 197 VGLGRQLHAHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM 253
V G + + + + ++G S++ +I + + R+ DA N+ ++ D +WG++
Sbjct: 511 VDKGTE-YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGAL 569
Query: 254 -----IDGFSKL--DFARTVFNEMESPN 274
I G ++L A+ +F EME N
Sbjct: 570 LGASRIHGNTELGEKAAKMIF-EMEPDN 596
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 21/264 (7%)
Query: 344 NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
N+ + N + Q RLF+ S + I++N ++ C + + QL +
Sbjct: 53 NIAITNHMRNGQCDSALRLFN----SMPRRSSISWNAMISGCLSNDKFYLARQL----FE 104
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
D+ N ++ V+ +L +AR LF+ M + DVVSW++++ GYAQ G +EA ++
Sbjct: 105 KMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEI 164
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M N ++ G+L A G +E+ +L+ + ++ +I +C++
Sbjct: 165 FDEMPCK----NSISWNGMLAAYVQNGRIEDARRLFE-SKADWELISW----NCMMGGYV 215
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
+ R+ +A ++M + D V W ++++ +G + +R E D A+V
Sbjct: 216 KRNRLVDARGIFDRMP-ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMV- 273
Query: 584 LCNIYASSGKWEEVARLMGSMKER 607
+ Y +G +E R+ M E+
Sbjct: 274 --SGYVQNGMLDEARRVFDGMPEK 295
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 295/539 (54%), Gaps = 52/539 (9%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D + + +++M + G L AR VFD + ++ VV WT +I+ Q A+EL++ L
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ G PD++T S+I AC+ L V LG QLH+ ++ S L+ MY K
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAK----- 301
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG-VASCSNAN 292
S+I + +D+A VF M ++ SW +I+G V S N
Sbjct: 302 ------SNIGQA--------------MDYANKVFERMPKNDVISWTALISGYVQSGVQEN 341
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+ M+LF EM + + P+ +T S+L +C S G Q+H+++IK S V NA++
Sbjct: 342 KVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALV 401
Query: 353 QHQAG-----ELFRLFSLMLASQTKP----------DH-----------ITFNDVMGACA 386
A E R+F+ + P DH TF ++ A A
Sbjct: 402 SMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAA 461
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
++ L G QLH +K G D FV N L+ MY +CG L A FN ++D +V+SW+S
Sbjct: 462 SVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTS 521
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I G A+ G E AL LF M +GV+PN VT + VL+ACSHVGLV EG + +R MQ ++
Sbjct: 522 MISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDH 581
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
G+IP E +C+VDLLAR+G V EA +FIN+M D +VWK+LL +C++H N++VG+
Sbjct: 582 GLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIT 641
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A+N+++++P + A VLL N+YA +G W+EVAR+ +M++ + K G SW+E++ H
Sbjct: 642 AKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTH 700
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 228/509 (44%), Gaps = 88/509 (17%)
Query: 96 LQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-RNVVSWTAMI 153
L+LGR +H +L DAV+ N +L +Y +CG++ AR VFD M R++VSWTAM
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGLGRQLHAHVIKSE 211
+ ++NG E ++ L +ML+SGL+P+ +T + AC L C+ G L
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEME 271
G+ + +ALI M + + A VF + K + W +I +R V E
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLI--------SRYVQGE-- 233
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
C A EA+ LF + + PD T+ S++ ACT S+ G+Q
Sbjct: 234 ----------------C--AEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ 275
Query: 332 IHSYIIKKGFYSNVPV-------------------CNAILQH------------------ 354
+HS ++ G S+ V N + +
Sbjct: 276 LHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQ 335
Query: 355 ---QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q ++ LF ML KP+HIT++ ++ +CA+++ + G Q+H +++K+ A
Sbjct: 336 SGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHT 395
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA--LKLFRRMRS 469
V N L+ MY + G + AR +FN + + ++ C E L R+
Sbjct: 396 VGNALVSMYAESGCMEEARRVFNQLYERSMIP------------CITEGRDFPLDHRIVR 443
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
V + T +++A + VG++ +G QL+ M + G R + +V + +R G +
Sbjct: 444 MDVGISSSTFASLISAAASVGMLTKGQQLH-AMSLKAGFGSDRFVSNSLVSMYSRCGYLE 502
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+A N++ D +++ W S+++ HG
Sbjct: 503 DACRSFNELK-DRNVISWTSMISGLAKHG 530
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 161/343 (46%), Gaps = 54/343 (15%)
Query: 61 NEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
N+ + F + N + I+P+ TY+ ++ +C+S+ GR+VH H++ S +
Sbjct: 341 NKVMALFGEMLNES---IKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVG 397
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++MY + G +E+AR VF+++ +R+++ C G++ L ++++ +
Sbjct: 398 NALVSMYAESGCMEEARRVFNQLYERSMIP-------CITEGRD---FPLDHRIVRMDVG 447
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
TF S+I A + + + G+QLHA +K+ GS N+L++MY++ + DA
Sbjct: 448 ISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRS 507
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F+ + +++ SW SMI G +K + A A+SLF
Sbjct: 508 FNELKDRNVISWTSMISGLAKHGY----------------------------AERALSLF 539
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI-------HSYIIKKGFYSNVPVCNAI 351
+M + P+ +T ++L AC+ + +G + H I + Y+ C
Sbjct: 540 HDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA----CMVD 595
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
L ++G + + K D + + ++GAC + ++E+G
Sbjct: 596 LLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVG 638
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 192/591 (32%), Positives = 304/591 (51%), Gaps = 65/591 (10%)
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
N N T +++A + L+LG++VH + S D + N ++NMY K G
Sbjct: 896 NGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCA 955
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
AR VF++M +++SW +MI+ C+Q+ E ++ L++ +L GL PD FT S++RAC
Sbjct: 956 YFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRAC 1015
Query: 192 SGLC-CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
S L + + RQ+H H +K+ + + LI +Y+K
Sbjct: 1016 SSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKS--------------------- 1054
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
K++ A +F + +LA WN ++ G ++ +A+ LFS + D
Sbjct: 1055 -------GKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQ 1107
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELF-- 360
+T+ + AC + L QG QIH++ IK GF S++ V + IL AG +F
Sbjct: 1108 ITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNY 1167
Query: 361 --------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
R++ M S+ PD TF ++ A + + +LE G
Sbjct: 1168 ISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQG 1227
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
QLH ++K D FV L+DMY KCG++ A LF M ++ W++++VG AQ
Sbjct: 1228 RQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQH 1287
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G EEA+ LF+ M+S G+ P+ V+ +G+L+ACSH GL E + M N+YGI P E
Sbjct: 1288 GNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEH 1347
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
SC+VD L RAG V EA+ I M F + ++LL +C+ G+V+ GKR A + ++
Sbjct: 1348 YSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALE 1407
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
P +SAA VLL NIYA++ +W++V MK + V+K PG SWI+++ +H
Sbjct: 1408 PFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLH 1458
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 168/633 (26%), Positives = 281/633 (44%), Gaps = 100/633 (15%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDL--FSSLCKQNLYN--EALVAFDFLQNNTNFR 77
+ C L A +V D+ R W+ L +++ N N E L F L+ +
Sbjct: 666 YSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGST 725
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
R T A ++ C + L VH + + + D + ++N+Y KCG + DAR++
Sbjct: 726 TR-MTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLL 784
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC-- 195
FD M +R+VV W M+ G Q G E A +L+ + +SGL PD+F+ I+ S +
Sbjct: 785 FDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWD 844
Query: 196 -CVGLGRQLHAHVIK---SEHGSHL-----------------------ISQNALIAMYTK 228
L Q+ A+ K S+ + ++ N L Y
Sbjct: 845 EGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDA 904
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDG--------------------FSKLD---FART 265
++ V +++A D G + G +SK+ FAR
Sbjct: 905 VTLLV----VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFARE 960
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
VFN+M+ +L SWN++I+ A S E+++LF ++ L PD T+ S+L AC+S +
Sbjct: 961 VFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLID 1020
Query: 326 -LYQGMQIHSYIIKKG-------------FYS-----------------------NVPVC 348
L QIH + +K G YS N +
Sbjct: 1021 GLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMF 1080
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
I+ + + LFSL+ S K D IT AC + L+ G Q+H + +K G
Sbjct: 1081 GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 1140
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ V +G++DMY+KCG + +A +FN++ PD V+W+S+I G G ++AL+++ RMR
Sbjct: 1141 DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 1200
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
S V P+ T ++ A S V +E+G QL+ + + + + +VD+ A+ G +
Sbjct: 1201 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI-KLDCVSDPFVGTSLVDMYAKCGNI 1259
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+A +M +I +W ++L HGN +
Sbjct: 1260 EDAYRLFKKMNV-RNIALWNAMLVGLAQHGNAE 1291
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 224/486 (46%), Gaps = 53/486 (10%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+ S +L LG+ H I+ S D L N++L MY KCGSL AR VFD P+R+
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 146 VVSWTAMIAGC-----SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+V+W A++ S +G + L+ + S + T +++ C C+
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+H + IK + AL+ +Y+K R+ DA +F + +D+ W M+ G+ +L
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ EA LFSE L PD +V+ L+
Sbjct: 807 GLEK----------------------------EAFQLFSEFHRSGLRPDEFSVQ-LILNG 837
Query: 321 TSPLSLYQGM----QIHSYIIKKGFYSNVPVC---NAILQH--QAGE---LFRLFSLMLA 368
S ++ +G Q+ +Y K + P N L AG+ F M
Sbjct: 838 VSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNG 897
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
D +T V+ A A LE+G Q+H +K+GL DV V N L++MY K G
Sbjct: 898 LNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYF 957
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
ARE+FN M+ D++SW+S+I AQ EE++ LF + G++P+H TL VL ACS
Sbjct: 958 AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS 1017
Query: 489 VGLVEEGLQLYR---IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
+ +GL + R + + G I + ++D+ +++G++ EAE F+ Q D D+
Sbjct: 1018 ---LIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAE-FLFQNKDDLDLA 1073
Query: 546 VWKSLL 551
W +++
Sbjct: 1074 CWNAMM 1079
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 202/477 (42%), Gaps = 59/477 (12%)
Query: 42 FDDIWDFDLFS-----SLCKQNLYNEALVAF--DFLQNNTNFRIRPS--TYADLISACSS 92
F+D+ DL S S C Q+ E V D L ++P T A ++ ACSS
Sbjct: 962 FNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG----LKPDHFTLASVLRACSS 1017
Query: 93 L-RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
L L + R++H H L + D+ + ++++Y K G +E+A +F ++ W A
Sbjct: 1018 LIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNA 1077
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
M+ G A+EL+ + +SG DQ T + +AC L + G+Q+HAH IK+
Sbjct: 1078 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 1137
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEME 271
S L + ++ MY K +++A VF+ I+ D +W SM
Sbjct: 1138 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSM------------------ 1179
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
I+G N ++A+ ++ M ++PD T +L+ A + +L QG Q
Sbjct: 1180 ----------ISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQ 1229
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACA 386
+H+ +IK S+ V +++ A + +RLF M +N ++ A
Sbjct: 1230 LHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA----LWNAMLVGLA 1285
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-----DPDV 441
+ E L + G+ D G++ G A E + M +P++
Sbjct: 1286 QHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEI 1345
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
+S L+ + G +EA K+ M + L+G AC G VE G ++
Sbjct: 1346 EHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG---ACRIQGDVETGKRV 1399
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 152/374 (40%), Gaps = 50/374 (13%)
Query: 199 LGRQLHAHVIKS-EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG+ HA ++ S G H +S N L+ MY+K
Sbjct: 639 LGKCTHARIVVSGSAGDHFLSNN-LLTMYSKC---------------------------- 669
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASC-----SNANEAMSLFSEMGDRELIPDGLT 312
L AR VF+ +L +WN I+ A+ NA E + LF + +T
Sbjct: 670 GSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMT 729
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQ 370
+ +L C + L+ +H Y IK G +V V A++ + G + R L+
Sbjct: 730 LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRM-RDARLLFDWM 788
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF----VMNGLMDMYVKCGS- 425
+ D + +N ++ + + QL ++GL D F ++NG+ ++ G
Sbjct: 789 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
Query: 426 -----LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
A +L ++PDV W+ + G A++ F M + + VTL+
Sbjct: 849 LADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLL 908
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
VL A + +E G Q++ I G+ + +V++ ++ G + A + N M
Sbjct: 909 VVLAAVAGTDDLELGKQVHGIAVKS-GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 967
Query: 541 DDDIVVWKSLLASC 554
D++ W S+++SC
Sbjct: 968 -LDLISWNSMISSC 980
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 186/600 (31%), Positives = 312/600 (52%), Gaps = 67/600 (11%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D + + +RP+ TY ++ ACS L +++ G ++H H + D + +++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
Y KCG L +A+ +F M R+VV+W AMIAGCS G + A++L +QM + G+ P+ T
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
++ +G G+ LH + ++ + ++ L+ MY K +L
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLL---------- 262
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+AR +F+ M N SW+ +I G + EA+ LF +M
Sbjct: 263 ------------------YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMIL 304
Query: 304 RELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------- 352
++ + P +T+ S+L AC L +G ++H YIIK G ++ + N +L
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVID 364
Query: 353 --------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
A +F +M S PD T V+ AC+
Sbjct: 365 DAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACS 424
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+A+L+ G H Y++ G A D + N L+DMY KCG + ARE+FN M+ D+VSW++
Sbjct: 425 HLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNA 484
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I+GY G G EAL LF + + G++P+ +T + +L++CSH GLV EG + M ++
Sbjct: 485 MIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDF 544
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
I+P E C+VD+L RAG + EA FI M F+ D+ +W +LL++C+ H N+++G+
Sbjct: 545 SIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEV 604
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++ I + P ++ VLL NIY+++G+W++ A + + K+ G++K+PG SWIEI +HA
Sbjct: 605 SKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHA 664
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 241/517 (46%), Gaps = 71/517 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ Y L+ AC +SL +K+H H L + D+ + + + +Y C + AR +FDE
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P +V+ W +I + NG + AI+LY ML G+ P+++T+ +++ACSGL + G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
++H+H S + AL+ Y K +++A +FSS++ +D+ +W
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW---------- 178
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
N +IAG + ++A+ L +M + + P+ T+ +L
Sbjct: 179 ------------------NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
+L G +H Y +++ F + V V +L A
Sbjct: 221 GEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWS 280
Query: 357 ------------GELFRLF-SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E LF ++L P +T V+ ACA + L G +LHCYI+K
Sbjct: 281 AMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G LD+ + N L+ MY KCG + A F+ M D VS+S+++ G Q G AL +
Sbjct: 341 LGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSI 400
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL--QLYRIMQNEYGIIPTRERRSCVVDL 521
FR M+ SG+ P+ T++GVL ACSH+ ++ G Y I++ G + ++D+
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR---GFATDTLICNALIDM 457
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ G++ A + N+M DIV W +++ HG
Sbjct: 458 YSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 197/567 (34%), Positives = 313/567 (55%), Gaps = 32/567 (5%)
Query: 82 TYADLISAC-SSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFD 139
+ I AC S+ + GR+VH + + + V + N ++NMY KCG ++ AR VF
Sbjct: 103 AFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFG 162
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M ++ VSW +MI G QN A++ Y M ++GLMP F S + +C+ L C+ L
Sbjct: 163 LMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILL 222
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW----GSMID 255
G+Q H IK + N L+A+Y + R+ + VFS + +D SW G++ D
Sbjct: 223 GQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALAD 282
Query: 256 GFSKLDFARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
+ + A VF EM SPN ++ ++A V+S S + + + + + + D
Sbjct: 283 SGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNA 342
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKK-----------GFYSNVPVCNAILQHQAGELF 360
+LL + +I S + ++ G+ N +C A+
Sbjct: 343 IENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAM--------- 393
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
L LM+ + D TF V+ ACA +A+LE G ++H ++ L DV + + L+DMY
Sbjct: 394 DLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMY 453
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCG + A FN M ++ SW+S+I GYA+ G G+ AL+LF RM+ SG P+H+T V
Sbjct: 454 SKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFV 513
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
GVL+ACSH+GLV+EG + ++ M YG++P E SC+VDLL RAG + + E+FIN+M
Sbjct: 514 GVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPI 573
Query: 541 DDDIVVWKSLL-ASCKTHG-NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
+I++W+++L A C+ +G ++G+RAAE + +DP N+ VLL N+YAS GKWE++A
Sbjct: 574 KPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMA 633
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIH 625
R +M+E V+K G SW+ ++ +H
Sbjct: 634 RTRRAMREAAVKKEAGCSWVTMKDGVH 660
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 234/481 (48%), Gaps = 26/481 (5%)
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H ++L D L N ++N+Y + G AR +FDEMP RN V+W +I+G +QNG
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRAC-SGLCCVGLGRQLHAHVIKSE-HGSHLISQN 220
A + +M+ G +P++F FGS IRAC + GRQ+H + I++ + + + N
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLAS 277
LI MY K I A +VF + KD SW SMI G + + A +N M L
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202
Query: 278 WN-TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV-----RSLLCACTSPLSLYQGMQ 331
N +I+ ++SC A+ L + E I GL + +LL L + +
Sbjct: 203 SNFALISALSSC--ASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQK 260
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+ S+++++ S V A+ A E +F M+ + P+ +TF +++ ++++
Sbjct: 261 VFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS 320
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLI 448
+ ++ Q+H I+K + D + N L+ Y K G + + E+F+ M E D VSW+S+I
Sbjct: 321 TSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQN 504
GY +A+ L M G R + T VL+AC+ V +E G++++ R
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLE 440
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+I S +VD+ ++ GR+ A F N M ++ W S+++ HG+ D
Sbjct: 441 SDVVIG-----SALVDMYSKCGRIDYASRFFNLMPV-RNLYSWNSMISGYARHGHGDNAL 494
Query: 565 R 565
R
Sbjct: 495 R 495
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 112/210 (53%), Gaps = 13/210 (6%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALV-AFD--FLQNNTNFRIRPSTYADLISA 89
E + R + D ++S+ ++NE L A D +L R+ T+A ++SA
Sbjct: 358 ENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSA 417
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
C+++ +L+ G +VH + + + D V+ + +++MY KCG ++ A F+ MP RN+ SW
Sbjct: 418 CATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSW 477
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG-------RQ 202
+MI+G +++G + A+ L+ +M SG +PD TF ++ ACS + V G +
Sbjct: 478 NSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTE 537
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
++ V + EH S ++ L+ + D+I
Sbjct: 538 VYGLVPRVEHYSCMVD---LLGRAGELDKI 564
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 186/600 (31%), Positives = 311/600 (51%), Gaps = 67/600 (11%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D + + +RP+ TY ++ ACS L +++ G ++H H + D + +++
Sbjct: 93 AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
Y KCG L +A+ +F M R+VV+W AMIAGCS G + A++L +QM + G+ P+ T
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
++ +G G+ LH + ++ + ++ L+ MY K +L
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLL---------- 262
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+AR +F+ M N SW+ +I G EA+ LF +M
Sbjct: 263 ------------------YARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMIL 304
Query: 304 RELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------- 352
++ + P +T+ S+L AC L +G ++H YIIK G ++ + N +L
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVID 364
Query: 353 --------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
A +F +M S PD T V+ AC+
Sbjct: 365 DAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACS 424
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+A+L+ G H Y++ G A D + N L+DMY KCG + ARE+FN M+ D+VSW++
Sbjct: 425 HLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNA 484
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I+GY G G EAL LF + + G++P+ +T + +L++CSH GLV EG + M ++
Sbjct: 485 MIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDF 544
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
I+P E C+VD+L RAG + EA FI M F+ D+ +W +LL++C+ H N+++G+
Sbjct: 545 SIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEV 604
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++ I + P ++ VLL NIY+++G+W++ A + + K+ G++K+PG SWIEI +HA
Sbjct: 605 SKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHA 664
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 241/517 (46%), Gaps = 71/517 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ Y L+ AC +SL +K+H H L + D+ + + + +Y C + AR +FDE
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P +V+ W +I + NG + AI+LY ML G+ P+++T+ +++ACSGL + G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
++H+H S + AL+ Y K +++A +FSS++ +D+ +W
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW---------- 178
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
N +IAG + ++A+ L +M + + P+ T+ +L
Sbjct: 179 ------------------NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
+L G +H Y +++ F + V V +L A
Sbjct: 221 GEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWS 280
Query: 357 ------------GELFRLF-SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E LF ++L P +T V+ ACA + L G +LHCYI+K
Sbjct: 281 AMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G LD+ + N L+ MY KCG + A F+ M D VS+S+++ G Q G AL +
Sbjct: 341 LGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSI 400
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL--QLYRIMQNEYGIIPTRERRSCVVDL 521
FR M+ SG+ P+ T++GVL ACSH+ ++ G Y I++ G + ++D+
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR---GFATDTLICNALIDM 457
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ G++ A + N+M DIV W +++ HG
Sbjct: 458 YSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 316/583 (54%), Gaps = 58/583 (9%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ ++L K EA FD ++ T+ +IS ++ R++ D + +
Sbjct: 58 MITNLSKDGRIMEARRLFDEMREPDVI-----TWTTVISGYIKCGMIEEARRLFDRVDAK 112
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
K + V ++ Y + + DA +F+EMP +NVVSW MI G +QNG+ ++A+ L+
Sbjct: 113 K---NVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLF 169
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M P++ +++S N +++M +
Sbjct: 170 EKM------PER---------------------------------NVVSWNTVMSMLAQC 190
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVA 286
RI +A +F + +D+ SW +MI G SK +D AR +F+ M N+ SWN +I G A
Sbjct: 191 GRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYA 250
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+EA+ LF M +R+L + +++ L + ++ + + KK S
Sbjct: 251 QNLRLDEALDLFERMPERDLP----SWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTT 306
Query: 347 VCNAILQH-QAGELFRLFSLMLASQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ +Q ++ E ++FS ML++ KP+ TF V+GAC+ +A L G Q+H I KT
Sbjct: 307 MITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKT 366
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFN--FMEDPDVVSWSSLIVGYAQFGCGEEALK 462
FV++ L++MY KCG LG+AR++F+ D+VSW+ +I YA G G+EA+
Sbjct: 367 VYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAIN 426
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
F+ MR SG +P+ VT VG+L+ACSH GLVEEGL+ + + + I+ + +C+VDL
Sbjct: 427 FFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLC 486
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAGR+ EA FI ++ VW +LLA C H NV +GK+AA+ +L+++P N+ +
Sbjct: 487 GRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYL 546
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL NIYAS+GKW E AR+ MK++G++K PG SWIE+ ++H
Sbjct: 547 LLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVH 589
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 173/390 (44%), Gaps = 82/390 (21%)
Query: 241 SIARKDITSWGS------MIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
SI RKD T G+ MI SK + AR +F+EM P++ +W T+I+G C
Sbjct: 40 SIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMI 99
Query: 292 NEAMSLF----------------------SEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
EA LF +++ D E + + + ++++ T Q
Sbjct: 100 EEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQN 159
Query: 330 MQIHS--YIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVM 382
+I S Y+ +K NV N ++ A E RLF M + D I++ ++
Sbjct: 160 GRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRM----PERDVISWTAMI 215
Query: 383 GACAAMASLEMGTQLHCYI----------MKTGL--------ALDVF---------VMNG 415
+ ++ L + M TG ALD+F N
Sbjct: 216 AGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNT 275
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS-GVRP 474
++ ++ G L AR+LFN M +V+SW+++I G Q G EEALK+F RM S+ G +P
Sbjct: 276 MITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKP 335
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIM-----QNEYGIIPTRERRSCVVDLLARAGRVH 529
N T V VL ACS++ + EG Q+++I+ Q+ ++ S ++++ ++ G +
Sbjct: 336 NQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVV------SALINMYSKCGELG 389
Query: 530 EAED-FINQMAFDDDIVVWKSLLASCKTHG 558
A F + M D+V W ++A+ HG
Sbjct: 390 TARKMFDDGMTSQRDLVSWNGIIAAYAHHG 419
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 204/618 (33%), Positives = 327/618 (52%), Gaps = 71/618 (11%)
Query: 50 LFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
+ S N+ AL+ F D ++N + +A ACS+ + +G + ++
Sbjct: 139 MVSCFANNNMGFRALLTFVDMIENG--YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVK 196
Query: 109 SK-CQPDAVLHNHILNMYGKC-GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ Q D + +++M+ K G L A VF++MP+RN V+WT MI Q G AI
Sbjct: 197 TGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAI 256
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL--ISQNALIA 224
+L+++M+ SG PD+FT +I AC+ + + LG+QLH+ I+ HG L LI
Sbjct: 257 DLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIR--HGLTLDRCVGCCLIN 314
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY K +DG + AR +F+++ N+ SW +I G
Sbjct: 315 MYAKCS-----------------------VDG--SMCAARKIFDQILDHNVFSWTAMITG 349
Query: 285 -VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
V EA+ LF M +IP+ T S L AC + +L G Q+ ++ +K GF S
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS 409
Query: 344 NVPVCNAILQHQA------------------------------------GELFRLFSLML 367
V N+++ A E LF+ +
Sbjct: 410 VNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
TF ++ A++ ++ G Q+H ++K+GL L+ V N L+ MY +CG++
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIE 529
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
SA ++F MED +V+SW+S+I G+A+ G +AL+LF +M GVRPN VT + VL+ACS
Sbjct: 530 SAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACS 589
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
HVGLV EG + ++ M E+G+IP E +C+VD+L R+G + EA FIN M + D +VW
Sbjct: 590 HVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVW 649
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
++ L +C+ HGN+++GK AA+ I++ +P + AA +LL N+YAS+ KW+EV+ + +MKE+
Sbjct: 650 RTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEK 709
Query: 608 GVRKVPGQSWIEIQTKIH 625
+ K G SW+E++ K+H
Sbjct: 710 NLIKEAGCSWVEVENKVH 727
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 240/520 (46%), Gaps = 73/520 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY+ + C RS +G VH+ + S Q D+V N ++++Y KCG E A +F M
Sbjct: 68 TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLM 127
Query: 142 -PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
R+++SW+AM++ + N A+ +V M+++G P+++ F + RACS V +G
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 201 RQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
+ V+K+ + S + LI M+ K R D+ S
Sbjct: 188 DSIFGFVVKTGYLQSDVCVGCGLIDMFVK--------------GRGDLVS---------- 223
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A VF +M N +W +I + A EA+ LF EM PD T+ ++ A
Sbjct: 224 ---AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280
Query: 320 CTSPLSLYQGMQIHSYIIKKGF-------------YSNVPV----CNA------ILQH-- 354
C + L G Q+HS I+ G Y+ V C A IL H
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 355 -----------QAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q G E LF M+ + P+H TF+ + ACA +A+L +G Q+
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ +K G + V N L+ MY + G + AR+ F+ + + +++S++++I YA+ EE
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV 518
AL+LF + G+ + T +L+ + +G + +G Q++ R++++ G+ + + +
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS--GLKLNQSVCNAL 518
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + +R G + A M D +++ W S++ HG
Sbjct: 519 ISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 204/417 (48%), Gaps = 35/417 (8%)
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
NG+ + AI M+ G PD T+ ++ C +G +H + +S+ ++
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 219 QNALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSMIDGFSKLDFA----RTVFNEMESP 273
N+LI++Y+K + A ++F + + +D+ SW +M+ F+ + T + +E+
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDR--ELIPDGLTVRSLLCACTSPLSLY---Q 328
+ A +CS A F +GD + ++S +C + ++ +
Sbjct: 164 YYPNEYCFAAATRACSTAE-----FVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGR 218
Query: 329 GMQIHSYIIKKGFYSNVPVCNAI---------LQH-QAGELFRLFSLMLASQTKPDHITF 378
G + ++ + + +P NA+ +Q AGE LF M+ S +PD T
Sbjct: 219 GDLVSAFKV----FEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTL 274
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC---GSLGSARELFNF 435
+ V+ ACA M L +G QLH ++ GL LD V L++MY KC GS+ +AR++F+
Sbjct: 275 SGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ 334
Query: 436 MEDPDVVSWSSLIVGYAQF-GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ D +V SW+++I GY Q G EEAL LFR M + V PNH T L AC+++ +
Sbjct: 335 ILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRI 394
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
G Q++ + G + ++ + AR+GR+ +A + + F+ +++ + +++
Sbjct: 395 GEQVF-THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD-ILFEKNLISYNTVI 449
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
Query: 341 FYSNVPVCNAILQH-QAGELFRLFSL---MLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
F + P+ ++Q G L + S M+ + PD T++ + C S ++GT
Sbjct: 28 FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFG 455
+H + ++ L LD +N L+ +Y KCG A +F M D++SWS+++ +A
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNN 147
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
G AL F M +G PN ACS V G ++
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 301/585 (51%), Gaps = 64/585 (10%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ +YA +C+++ L GR++H H + +K D V+ I+++Y K SL DAR
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F +P V + AM+ G + G A+ L+ M++S + D + + AC+
Sbjct: 308 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGY 367
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+Q+H IKS + NA++ +Y K +++A+ +F + +KD S
Sbjct: 368 FQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVS-------- 419
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
WN IIA + + ++ + F+EM + PD T S+L
Sbjct: 420 --------------------WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------------- 351
AC + SL G+ +H +IK G S+ V + +
Sbjct: 460 KACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVV 519
Query: 352 ----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
L ++ E + FS ML KPDH TF V+ CA +A++E+G Q+H I
Sbjct: 520 SWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQI 579
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K + D ++ + L+DMY KCG + + +F +E D VSW+++I GYA G G EAL
Sbjct: 580 IKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEAL 639
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
++F RM+ V PNH T V VL ACSHVGL ++G + + +M Y + P E +C+VD+
Sbjct: 640 RMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDI 699
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L R+ EA FIN M F D V+WK+LL+ CK +V++ + AA N+L +DP +S+
Sbjct: 700 LGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVY 759
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+LL N+YA SGKW +V+R +K+ ++K PG SWIE+Q+++H
Sbjct: 760 ILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHG 804
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 282/593 (47%), Gaps = 82/593 (13%)
Query: 11 LPRWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLYNEAL 64
+PR W+ + AG++ + + FD + D D L S C++ ++ E++
Sbjct: 78 MPRRDTVSWNT--MLTAYSHAGDI-STAVALFDGMPDPDVVSWNALVSGYCQRGMFQESV 134
Query: 65 VAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
D + P +T+A L+ +CS+L L LG +VH + + + D + ++
Sbjct: 135 ---DLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALV 191
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+MYGKC SL+DA F MP+RN VSW A IAGC QN Q +EL+++M + GL Q
Sbjct: 192 DMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQP 251
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
++ S R+C+ + C+ GRQLHAH IK++ S + A++ +Y K + + D
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD-------- 303
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
AR F + + + + N ++ G+ EAM LF M
Sbjct: 304 --------------------ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
+ D +++ + AC +QG Q+H IK GF ++ V NA+L
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 403
Query: 354 ------------------------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACA 386
Q G + F+ ML KPD T+ V+ ACA
Sbjct: 404 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
A+ SLE G +H ++K+GL D FV + ++DMY KCG + A++L + + VVSW++
Sbjct: 464 ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 523
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNE 505
++ G++ EEA K F M G++P+H T VL C+++ +E G Q++ +I++ E
Sbjct: 524 ILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 583
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ S +VD+ A+ G + ++ + + D V W +++ HG
Sbjct: 584 --MLDDEYISSTLVDMYAKCGDMPDSL-LVFEKVEKRDFVSWNAMICGYALHG 633
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 220/508 (43%), Gaps = 99/508 (19%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQR---------------------------- 144
P+A + N +L MY +C AR VFD MP+R
Sbjct: 50 PNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGM 109
Query: 145 ---NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+VVSW A+++G Q G +++L+V+M + G+ PD+ TF ++++CS L + LG
Sbjct: 110 PDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGV 169
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+HA +K+ + + +AL+ MY K + DA F + ++ SWG+
Sbjct: 170 QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAA-------- 221
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
IAG + LF EM L + S +C
Sbjct: 222 --------------------IAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------------------ 357
+ L G Q+H++ IK F S+ V AI+ A
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 358 ------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E LF M+ S + D ++ + V ACA G Q+HC +K+G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+D+ V N ++D+Y KC +L A +F M+ D VSW+++I Q G ++ + F
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLAR 524
M G++P+ T VL AC+ + +E GL ++ +++++ G+ S VVD+ +
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS--GLGSDAFVASTVVDMYCK 499
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G + EA+ +++ +V W ++L+
Sbjct: 500 CGIIDEAQKLHDRIG-GQQVVSWNAILS 526
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 189/424 (44%), Gaps = 43/424 (10%)
Query: 179 PDQFTFGSIIRACS--GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
P + TF + ++C+ G + GR HA ++ S + N L+ MY + A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACAR 72
Query: 237 NVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
VF ++ R+D SW +M+ +S + A +F+ M P++ SWN +++G E
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG------------- 340
++ LF EM R + PD T LL +C++ L G+Q+H+ +K G
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 341 -------------FYSNVP----------VCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
F+ +P + + Q LF M +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ +CAAM+ L G QLH + +K + D V ++D+Y K SL AR F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ V + ++++VG + G G EA+ LF+ M S +R + V+L GV +AC+ +G Q
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ + + G + V+DL + + EA I Q D V W +++A+ + +
Sbjct: 373 VH-CLAIKSGFDVDICVNNAVLDLYGKCKALMEAY-LIFQGMKQKDSVSWNAIIAALEQN 430
Query: 558 GNVD 561
G+ D
Sbjct: 431 GHYD 434
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 301/585 (51%), Gaps = 64/585 (10%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ +YA +C+++ L GR++H H + +K D V+ I+++Y K SL DAR
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F +P V + AM+ G + G A+ L+ M++S + D + + AC+
Sbjct: 308 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGY 367
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+Q+H IKS + NA++ +Y K +++A+ +F + +KD S
Sbjct: 368 FQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVS-------- 419
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
WN IIA + + ++ + F+EM + PD T S+L
Sbjct: 420 --------------------WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------------- 351
AC + SL G+ +H +IK G S+ V + +
Sbjct: 460 KACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVV 519
Query: 352 ----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
L ++ E + FS ML KPDH TF V+ CA +A++E+G Q+H I
Sbjct: 520 SWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQI 579
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K + D ++ + L+DMY KCG + + +F +E D VSW+++I GYA G G EAL
Sbjct: 580 IKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEAL 639
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
++F RM+ V PNH T V VL ACSHVGL ++G + + +M Y + P E +C+VD+
Sbjct: 640 RMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDI 699
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L R+ EA FIN M F D V+WK+LL+ CK +V++ + AA N+L +DP +S+
Sbjct: 700 LGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVY 759
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+LL N+YA SGKW +V+R +K+ ++K PG SWIE+Q+++H
Sbjct: 760 ILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHG 804
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 282/593 (47%), Gaps = 82/593 (13%)
Query: 11 LPRWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLYNEAL 64
+PR W+ + AG++ + + FD + D D L S C++ ++ E++
Sbjct: 78 MPRRDTVSWNT--MLTAYSHAGDI-STAVALFDGMPDPDVVSWNALVSGYCQRGMFQESV 134
Query: 65 VAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
D + P +T+A L+ +CS+L L LG +VH + + + D + ++
Sbjct: 135 ---DLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALV 191
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+MYGKC SL+DA F MP+RN VSW A IAGC QN Q +EL+++M + GL Q
Sbjct: 192 DMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQP 251
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
++ S R+C+ + C+ GRQLHAH IK++ S + A++ +Y K + + D
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD-------- 303
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
AR F + + + + N ++ G+ EAM LF M
Sbjct: 304 --------------------ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
+ D +++ + AC +QG Q+H IK GF ++ V NA+L
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 403
Query: 354 ------------------------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACA 386
Q G + F+ ML KPD T+ V+ ACA
Sbjct: 404 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
A+ SLE G +H ++K+GL D FV + ++DMY KCG + A++L + + VVSW++
Sbjct: 464 ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 523
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNE 505
++ G++ EEA K F M G++P+H T VL C+++ +E G Q++ +I++ E
Sbjct: 524 ILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 583
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ S +VD+ A+ G + ++ + + D V W +++ HG
Sbjct: 584 --MLDDEYISSTLVDMYAKCGDMPDSL-LVFEKVEKRDFVSWNAMICGYALHG 633
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 219/508 (43%), Gaps = 99/508 (19%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQR---------------------------- 144
P A + N +L MY +C AR VFD MP+R
Sbjct: 50 PTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGM 109
Query: 145 ---NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+VVSW A+++G Q G +++L+V+M + G+ PD+ TF ++++CS L + LG
Sbjct: 110 PDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGV 169
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+HA +K+ + + +AL+ MY K + DA F + ++ SWG+
Sbjct: 170 QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAA-------- 221
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
IAG + LF EM L + S +C
Sbjct: 222 --------------------IAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------------------ 357
+ L G Q+H++ IK F S+ V AI+ A
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 358 ------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E LF M+ S + D ++ + V ACA G Q+HC +K+G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+D+ V N ++D+Y KC +L A +F M+ D VSW+++I Q G ++ + F
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLAR 524
M G++P+ T VL AC+ + +E GL ++ +++++ G+ S VVD+ +
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS--GLGSDAFVASTVVDMYCK 499
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G + EA+ +++ +V W ++L+
Sbjct: 500 CGIIDEAQKLHDRIG-GQQVVSWNAILS 526
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 188/424 (44%), Gaps = 43/424 (10%)
Query: 179 PDQFTFGSIIRACS--GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
P + TF + ++C+ G + GR HA ++ S N L+ MY + A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 237 NVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
VF ++ R+D SW +M+ +S + A +F+ M P++ SWN +++G E
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG------------- 340
++ LF EM R + PD T LL +C++ L G+Q+H+ +K G
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 341 -------------FYSNVP----------VCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
F+ +P + + Q LF M +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ +CAAM+ L G QLH + +K + D V ++D+Y K SL AR F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ V + ++++VG + G G EA+ LF+ M S +R + V+L GV +AC+ +G Q
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ + + G + V+DL + + EA I Q D V W +++A+ + +
Sbjct: 373 VH-CLAIKSGFDVDICVNNAVLDLYGKCKALMEAY-LIFQGMKQKDSVSWNAIIAALEQN 430
Query: 558 GNVD 561
G+ D
Sbjct: 431 GHYD 434
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 218/697 (31%), Positives = 351/697 (50%), Gaps = 117/697 (16%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S K Y EAL F + + + ST A ++SA +SL +L G VH H +
Sbjct: 188 MISGHAKTAHYEEALAFFHQMSKH-GVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQ 246
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + + ++NMYGKC +DAR VFD + Q+N++ W AM+ SQNG + +EL+
Sbjct: 247 GFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELF 306
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS------------------- 210
+ M+ G+ PD+FT+ SI+ C+ + +GRQLH+ +IK
Sbjct: 307 LDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKA 366
Query: 211 ----EHGSHL--------ISQNALIAMYTKFD---------------------------- 230
E G H IS NA+I Y + +
Sbjct: 367 GALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASIL 426
Query: 231 ------RILDAWNVFSSIARK-----DITSWGSMIDGFSK---LDFARTVFNEMESPNLA 276
++L+A F ++ K ++ + S+ID +SK + A ++ M ++
Sbjct: 427 SACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVV 486
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
S N +IAG A N E+++L EM L P +T SL+ C + G+QIH I
Sbjct: 487 SVNALIAGYA-LKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAI 545
Query: 337 IKKGF---------------------------YSNVPVCNAI----------LQHQAGEL 359
+K+G +S +I +Q++ ++
Sbjct: 546 VKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDV 605
Query: 360 -FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
L+ M + PD TF V+ ACA ++SL G ++H I TG LD + L+D
Sbjct: 606 ALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVD 665
Query: 419 MYVKCGSLGSARELFN-FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY KCG + S+ ++F DV+SW+S+IVG+A+ G + ALK+F M S + P+ V
Sbjct: 666 MYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDV 725
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T +GVLTACSH G V EG Q++ +M N YGI P + +C+VDLL R G + EAE+FI++
Sbjct: 726 TFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDK 785
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
+ + + ++W +LL +C+ HG+ G+RAA+ +++++P +S+ VLL N+YA+SG W+E
Sbjct: 786 LEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEA 845
Query: 598 ARLMGSMKERGVRKVPGQSWIEI--QTKIHASGNDIS 632
L +M ++ ++K+PG SWI + +T + +G DIS
Sbjct: 846 RSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAG-DIS 881
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 242/549 (44%), Gaps = 80/549 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE- 140
T+A +SAC+ L++L LGR VH ++ S + + ++++Y KC SL AR +F
Sbjct: 49 TFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASA 108
Query: 141 -MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
P + VSWTA+I+G Q G + A+ ++ +M S + PDQ +++ A L +
Sbjct: 109 PFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLNAYISLGKLDD 167
Query: 200 GRQL--------------------HAHVIKSEHG---SHLISQNALIAMYTKFDRILDAW 236
QL HA E H +S++ + + + +L A
Sbjct: 168 ACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAI 227
Query: 237 NVFSSIA--------------RKDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWN 279
+++ I S+I+ + K D AR VF+ + N+ WN
Sbjct: 228 ASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWN 287
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
++ + + M LF +M + PD T S+L C L G Q+HS IIKK
Sbjct: 288 AMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKK 347
Query: 340 GFYSNVPVCNAILQ--HQAGEL----------------------------------FRLF 363
F SN+ V NA++ +AG L F LF
Sbjct: 348 RFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLF 407
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
M+ PD ++ ++ AC + LE G Q HC +K GL ++F + L+DMY KC
Sbjct: 408 RRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKC 467
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
G + A + ++ M + VVS ++LI GYA +E++ L M+ G++P+ +T ++
Sbjct: 468 GDIKDAHKTYSSMPERSVVSVNALIAGYA-LKNTKESINLLHEMQILGLKPSEITFASLI 526
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
C V GLQ++ + + + + ++ + + R+ +A ++ +
Sbjct: 527 DVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKS 586
Query: 544 IVVWKSLLA 552
IV+W +L++
Sbjct: 587 IVMWTALIS 595
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 182/419 (43%), Gaps = 53/419 (12%)
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V W + G E ++ Y + SG PDQFTF + AC+ L + LGR +H+
Sbjct: 13 VRQWNWRVQGTKHYSSERV-LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
VIKS S Q ALI +Y K + L ART
Sbjct: 72 CVIKSGLESTSFCQGALIHLYAKCN----------------------------SLTCART 103
Query: 266 VFNEMESPNL--ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS- 322
+F P+L SW +I+G +EA+ +F +M + +PD + + ++L A S
Sbjct: 104 IFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSA-VPDQVALVTVLNAYISL 162
Query: 323 -----PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
L+Q M I I+ NV + E F M K T
Sbjct: 163 GKLDDACQLFQQMPIP---IRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRST 219
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
V+ A A++A+L G +H + +K G ++V + L++MY KC AR++F+ +
Sbjct: 220 LASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAIS 279
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+++ W++++ Y+Q G ++LF M S G+ P+ T +L+ C+ +E G Q
Sbjct: 280 QKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQ 339
Query: 498 LYRIMQNEYGIIPTRER-----RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
L+ II R + ++D+ A+AG + EA M + D I W +++
Sbjct: 340 LHS------AIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHI-SWNAII 391
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 147/370 (39%), Gaps = 43/370 (11%)
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
WN + G S + + ++ + PD T L AC +L+ G +HS +I
Sbjct: 16 WNWRVQGTKHYS-SERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74
Query: 338 KKGFYSNVPVCNAILQHQAGELFRLF--SLMLASQTKPD-HITFNDVMGACAAMASLEMG 394
K G S C L H + L + AS P H + + A L
Sbjct: 75 KSGLEST-SFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPH- 132
Query: 395 TQLHCY-IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP--DVVSWSSLIVGY 451
LH + M+ D + +++ Y+ G L A +LF M P +VV+W+ +I G+
Sbjct: 133 EALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGH 192
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL--QLYRIMQ------ 503
A+ EEAL F +M GV+ + TL VL+A + + + GL + I Q
Sbjct: 193 AKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSI 252
Query: 504 -------NEYGIIPTRERRSCVVDLLARAGR--------VHEAEDFINQM---------- 538
N YG + V D +++ V+ F++ +
Sbjct: 253 YVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISC 312
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL-VLLCNIYASSGKWEEV 597
D + S+L++C ++VG++ I+K T++ + L ++YA +G +E
Sbjct: 313 GIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEA 372
Query: 598 ARLMGSMKER 607
+ M R
Sbjct: 373 GKHFEHMTYR 382
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 314/567 (55%), Gaps = 29/567 (5%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P Y + ++SACS L L+ G+++H ++L D + N I++ Y KC ++ R
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+F+ + ++VVSWT MIAGC QN A++L+V+M++ G PD F S++ +C L
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ GRQ+HA+ IK + +N LI MY K D + +A VF +A ++ S+ +MI+
Sbjct: 371 ALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIE 430
Query: 256 GFSK-------LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
G+S+ LD R + + P L ++ +++ +S + + + +
Sbjct: 431 GYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSL 490
Query: 309 DGLTVRSLL-----CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAGE 358
D +L+ C+C L + ++ + ++ V NA+ Q + E
Sbjct: 491 DSFAGSALIDVYSKCSCVGDARL---------VFEEIYDRDIVVWNAMFSGYSQQLENEE 541
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
+L+ + S+ KP+ TF V+ A + +ASL G Q H ++K GL D FV N L+D
Sbjct: 542 SLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVD 601
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY KCGS+ + + F+ D+ W+S+I YAQ G +AL++F RM GV+PN+VT
Sbjct: 602 MYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVT 661
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
VG+L+ACSH GL++ G + M +++GI P + +C+V LL RAG+++EA++F+ +M
Sbjct: 662 FVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKM 720
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
VVW+SLL++C+ G+V++G AAE + DP +S + +LL NI+AS G W V
Sbjct: 721 PIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVR 780
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ M V K PG SWIE+ ++H
Sbjct: 781 MVREKMDMSRVVKEPGWSWIEVNNEVH 807
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 271/550 (49%), Gaps = 79/550 (14%)
Query: 53 SLCKQNLYN-EALVAF-DFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHILS 108
S+ Q+ Y+ EAL+ F F+++ + +P+ Y A ++ AC+ L +L ++H ++
Sbjct: 126 SMYTQHGYSVEALLLFCRFMRSCSE---KPNEYILASVVRACTQLGNLSQALQLHGFVVK 182
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
D + +++ Y K G +++AR++FD + + V+WTA+IAG ++ G+ +++L
Sbjct: 183 GGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKL 242
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ QM + + PD++ S++ ACS L + G+Q+H +V++ + N +I Y K
Sbjct: 243 FNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLK 302
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
++ +F+ + KD+ S W T+IAG
Sbjct: 303 CHKVKTGRKLFNRLVDKDVVS----------------------------WTTMIAGCMQN 334
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------- 341
S +AM LF EM + PD S+L +C S +L +G Q+H+Y IK
Sbjct: 335 SFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVK 394
Query: 342 ------YS------------------NVPVCNAIL-----QHQAGELFRLFSLMLASQTK 372
Y+ NV NA++ Q + E LF M S +
Sbjct: 395 NGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSP 454
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P +TF ++G +++ LE+ +Q+HC I+K G++LD F + L+D+Y KC +G AR +
Sbjct: 455 PTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLV 514
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F + D D+V W+++ GY+Q EE+LKL++ ++ S ++PN T V+ A S++ +
Sbjct: 515 FEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASL 574
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV---HEAEDFINQMAFDDDIVVWKS 549
G Q + + + G+ + +VD+ A+ G + H+A NQ DI W S
Sbjct: 575 RHGQQFHNQVI-KMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQR----DIACWNS 629
Query: 550 LLASCKTHGN 559
++++ HG+
Sbjct: 630 MISTYAQHGD 639
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 241/491 (49%), Gaps = 68/491 (13%)
Query: 100 RKVHDHILS-SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
+K+H HI+ Q D L N +L+ Y K DA+ +FD MP RN+V+W++M++ +Q
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130
Query: 159 NGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLI 217
+G A+ L+ + ++S P+++ S++RAC+ L + QLH V+K +
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS 277
+LI Y K + +A +F + K +W ++I G++KL
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKL----------------- 233
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
+ ++ LF++M + ++ PD + S+L AC+ L G QIH Y++
Sbjct: 234 -----------GRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVL 282
Query: 338 KKGFYSNVPVCNAILQ-----HQA-------------------------------GELFR 361
++GF +V V N I+ H+ G+
Sbjct: 283 RRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMD 342
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
LF M+ KPD V+ +C ++ +L+ G Q+H Y +K + D FV NGL+DMY
Sbjct: 343 LFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 402
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KC SL +AR++F+ + +VVS++++I GY++ EAL LFR MR S P +T V
Sbjct: 403 KCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVS 462
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+L S + L+E Q++ ++ ++G+ S ++D+ ++ V +A + + +D
Sbjct: 463 LLGLSSSLFLLELSSQIHCLII-KFGVSLDSFAGSALIDVYSKCSCVGDAR-LVFEEIYD 520
Query: 542 DDIVVWKSLLA 552
DIVVW ++ +
Sbjct: 521 RDIVVWNAMFS 531
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 301/580 (51%), Gaps = 66/580 (11%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+ CS G +VH ++ D +++N +++MYGKC ++ A VFD M +
Sbjct: 8 AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLE 67
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
RNVVSWTA++ G Q G ++ L +M SG+ P++FTF + ++AC L V G Q+
Sbjct: 68 RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQI 127
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +KS + NA I MY+K RI A
Sbjct: 128 HGMCVKSGFEWVSVVGNATIDMYSKCGRI----------------------------GMA 159
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VFN+M NL SWN +IAG N +++ LF M + +PD T S L AC +
Sbjct: 160 EQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGAL 219
Query: 324 LSLYQGMQIHSYIIKKGF---------------------------------YSNVPVCNA 350
++ G QIH+ +I +GF N+ +A
Sbjct: 220 GAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSA 279
Query: 351 ILQ--HQAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
++Q Q G L LF + S + D + +MG A +A +E G Q+HCYI+K
Sbjct: 280 LIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVP 339
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
LD+ V N ++DMY+KCG A LF+ M+ +VVSW+ +I GY + G GE+A+ LF
Sbjct: 340 SGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFN 399
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
RM+ G+ + V + +L+ACSH GL+ E + + + N + + P E +C+VD+L RA
Sbjct: 400 RMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRA 459
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ EA++ I M + +W++LL++C+ HGN+++G+ E + ++D N V++
Sbjct: 460 GQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMS 519
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA +G W+E R+ +K +G++K GQSW+EI +IH
Sbjct: 520 NIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIH 559
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 220/498 (44%), Gaps = 55/498 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D A V D L R W + L + N A + L ++
Sbjct: 47 DMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGN----AKGSLALLCEMGYSGVK 102
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P+ T++ + AC +L ++ G ++H + S + +V+ N ++MY KCG + A V
Sbjct: 103 PNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQV 162
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F++MP RN+VSW AMIAG + G ++ L+ +M G +PD+FTF S ++AC L +
Sbjct: 163 FNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAI 222
Query: 198 GLGRQLHAHVIKSEHGSHL--ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
G Q+HA +I + I +A++ +Y K + +A VF I +K++ SW ++I
Sbjct: 223 RGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQ 282
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
GF A N EAM LF ++ + DG V S
Sbjct: 283 GF----------------------------AQEGNLLEAMDLFRQLRESVSNVDGF-VLS 313
Query: 316 LLCACTSPLSLY-QGMQIHSYIIKKGFYSNVPVCNAILQHQ-----AGELFRLFSLMLAS 369
++ + L+L QG Q+H YI+K ++ V N+I+ E RLFS M
Sbjct: 314 IMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVR 373
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+++ ++ E L + G+ LD L+ G + +
Sbjct: 374 NV----VSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRES 429
Query: 430 RELF-----NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+E F N P++ ++ ++ + G +EA L M+ ++PN +L+
Sbjct: 430 QEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMK---LKPNEGIWQTLLS 486
Query: 485 ACSHVGLVEEGLQLYRIM 502
AC G +E G ++ I+
Sbjct: 487 ACRVHGNLEIGREVGEIL 504
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 190/428 (44%), Gaps = 73/428 (17%)
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
M ++ ++R CS G Q+HA + G LI N LI MY K R+ A +
Sbjct: 1 MSERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACS 60
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF + +++ SW +++ G+ + NA +++L
Sbjct: 61 VFDRMLERNVVSWTALMCGYLQE----------------------------GNAKGSLAL 92
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF---------------- 341
EMG + P+ T + L AC + + GMQIH +K GF
Sbjct: 93 LCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSK 152
Query: 342 ---------------YSNVPVCNAILQHQAGE-----LFRLFSLMLASQTKPDHITFNDV 381
+ N+ NA++ E LF M PD TF
Sbjct: 153 CGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTST 212
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDV--FVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+ AC A+ ++ GTQ+H ++ G + + + + ++D+Y KCG L A+++F+ +E
Sbjct: 213 LKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQK 272
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+++SWS+LI G+AQ G EA+ LFR++R S + L ++ + + LVE+G Q++
Sbjct: 273 NLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMH 332
Query: 500 -RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
I++ G+ + + ++D+ + G EAE ++M ++V W ++ HG
Sbjct: 333 CYILKVPSGLDISVA--NSIIDMYLKCGLTEEAERLFSEMQV-RNVVSWTVMITGYGKHG 389
Query: 559 NVDVGKRA 566
+G++A
Sbjct: 390 ---LGEKA 394
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 309/609 (50%), Gaps = 66/609 (10%)
Query: 55 CKQN-LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
C QN Y L F +Q + +YA +C+++ L GR++H H + +K
Sbjct: 267 CVQNEQYVRGLELFIEMQR-LGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 325
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D V+ I+++Y K SL DAR F +P V + AM+ G + G A+ L+ M+
Sbjct: 326 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 385
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+S + D + + AC+ G+Q+H IKS + NA++ +Y K ++
Sbjct: 386 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 445
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+A+ +F + +KD S WN IIA + + ++
Sbjct: 446 EAYLIFQGMKQKDSVS----------------------------WNAIIAALEQNGHYDD 477
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-- 351
+ F+EM + PD T S+L AC + SL G+ +H +IK G S+ V + +
Sbjct: 478 TILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVD 537
Query: 352 ----------------------------------LQHQAGELFRLFSLMLASQTKPDHIT 377
L ++ E + FS ML KPDH T
Sbjct: 538 MYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFT 597
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F V+ CA +A++E+G Q+H I+K + D ++ + L+DMY KCG + + +F +E
Sbjct: 598 FATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVE 657
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D VSW+++I GYA G G EAL++F RM+ V PNH T V VL ACSHVGL ++G +
Sbjct: 658 KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR 717
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ +M Y + P E +C+VD+L R+ EA FIN M F D V+WK+LL+ CK
Sbjct: 718 YFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIR 777
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
+V++ + AA N+L +DP +S+ +LL N+YA SGKW +V+R +K+ ++K PG SW
Sbjct: 778 QDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSW 837
Query: 618 IEIQTKIHA 626
IE+Q+++H
Sbjct: 838 IEVQSEMHG 846
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/562 (29%), Positives = 270/562 (48%), Gaps = 79/562 (14%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSL 93
FD + D D L S C++ ++ E++ D + P +T+A L+ +CS+L
Sbjct: 148 FDGMPDPDVVSWNALVSGYCQRGMFQESV---DLFVEMARRGVSPDRTTFAVLLKSCSAL 204
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
L LG +VH + + + D + +++MYGKC SL+DA F MP+RN VSW A I
Sbjct: 205 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 264
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AGC QN Q +EL+++M + GL Q ++ S R+C+ + C+ GRQLHAH IK++
Sbjct: 265 AGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 324
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
S + A++ +Y K + + D AR F + +
Sbjct: 325 SDRVVGTAIVDVYAKANSLTD----------------------------ARRAFFGLPNH 356
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+ + N ++ G+ EAM LF M + D +++ + AC +QG Q+H
Sbjct: 357 TVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 416
Query: 334 SYIIKKGFYSNVPVCNAILQ---------------------------------HQAG--- 357
IK GF ++ V NA+L Q G
Sbjct: 417 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 476
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
+ F+ ML KPD T+ V+ ACAA+ SLE G +H ++K+GL D FV + ++
Sbjct: 477 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 536
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
DMY KCG + A++L + + VVSW++++ G++ EEA K F M G++P+H
Sbjct: 537 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 596
Query: 478 TLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
T VL C+++ +E G Q++ +I++ E ++ S +VD+ A+ G + ++ +
Sbjct: 597 TFATVLDTCANLATIELGKQIHGQIIKQE--MLDDEYISSTLVDMYAKCGDMPDSL-LVF 653
Query: 537 QMAFDDDIVVWKSLLASCKTHG 558
+ D V W +++ HG
Sbjct: 654 EKVEKRDFVSWNAMICGYALHG 675
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 214/476 (44%), Gaps = 68/476 (14%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D V N +L Y G + A +FD MP +VVSW A+++G Q G +++L+V+M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ G+ PD+ TF ++++CS L + LG Q+HA +K+ + + +AL+ MY K +
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
DA F + ++ SWG+ IAG
Sbjct: 244 DALCFFYGMPERNWVSWGAA----------------------------IAGCVQNEQYVR 275
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
+ LF EM L + S +C + L G Q+H++ IK F S+ V AI+
Sbjct: 276 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVD 335
Query: 354 HQAG------------------------------------ELFRLFSLMLASQTKPDHIT 377
A E LF M+ S + D ++
Sbjct: 336 VYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVS 395
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ V ACA G Q+HC +K+G +D+ V N ++D+Y KC +L A +F M+
Sbjct: 396 LSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK 455
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D VSW+++I Q G ++ + F M G++P+ T VL AC+ + +E GL
Sbjct: 456 QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLM 515
Query: 498 LY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
++ +++++ G+ S VVD+ + G + EA+ +++ +V W ++L+
Sbjct: 516 VHDKVIKS--GLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVVSWNAILS 568
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 188/424 (44%), Gaps = 43/424 (10%)
Query: 179 PDQFTFGSIIRACS--GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
P + TF + ++C+ G + GR HA ++ S N L+ MY + A
Sbjct: 55 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 114
Query: 237 NVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
VF ++ R+D SW +M+ +S + A +F+ M P++ SWN +++G E
Sbjct: 115 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 174
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG------------- 340
++ LF EM R + PD T LL +C++ L G+Q+H+ +K G
Sbjct: 175 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 234
Query: 341 -------------FYSNVP----------VCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
F+ +P + + Q LF M +
Sbjct: 235 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 294
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ +CAAM+ L G QLH + +K + D V ++D+Y K SL AR F +
Sbjct: 295 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ V + ++++VG + G G EA+ LF+ M S +R + V+L GV +AC+ +G Q
Sbjct: 355 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 414
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ + + G + V+DL + + EA I Q D V W +++A+ + +
Sbjct: 415 VH-CLAIKSGFDVDICVNNAVLDLYGKCKALMEAY-LIFQGMKQKDSVSWNAIIAALEQN 472
Query: 558 GNVD 561
G+ D
Sbjct: 473 GHYD 476
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 207/644 (32%), Positives = 321/644 (49%), Gaps = 68/644 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQN-LYNEALVAFDFLQNNTNFRI 78
D + C LD A R W + C QN Y + F +Q +
Sbjct: 194 DMYGKCRSLDDALRFFHGMGERNSVSWGAAIAG--CVQNEQYTRGMELFVQMQR-LGLGV 250
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
YA +C+++ L R++H H + + D V+ I+++Y K G+L DAR F
Sbjct: 251 SQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAF 310
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+P NV + AM+ G + G A++L+ M +SG+ D + + AC+ +
Sbjct: 311 IGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYF 370
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G Q+H +KS + +NA++ +Y K +++A+
Sbjct: 371 QGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAY---------------------- 408
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
VF EME + SWN IIA + + ++ +EM + PD T S+L
Sbjct: 409 ------LVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLK 462
Query: 319 ACTSPLSLYQGMQIHSYIIKKG-----FYSNVPV-----CNAI----------------- 351
AC SL G+ +H IK G F S+ V C AI
Sbjct: 463 ACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVS 522
Query: 352 ---------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
L Q+ E R FS ML KPDH T+ V+ CA +A++E+G Q+H I+
Sbjct: 523 WNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQII 582
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K + D ++ + L+DMY KCG++ + +F D VSW+++I GYA G G EAL+
Sbjct: 583 KQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALE 642
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+F RM+ + V PNH T V VL ACSHVGL+++G Q + +M + Y ++P E +C+VD+L
Sbjct: 643 MFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDIL 702
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R+ EA +FI M + D VVWK+LL+ CK +V+V + AA N+L++DP +++ +
Sbjct: 703 GRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYI 762
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
LL N+YA SGKW +V+R M++ +RK PG SWIE+Q+++H
Sbjct: 763 LLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHG 806
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/547 (28%), Positives = 259/547 (47%), Gaps = 69/547 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S C+ ++ + V + + +T A L+ +C L L LG ++H + +
Sbjct: 122 LISGYCQHGMFRNS-VGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKT 180
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + +++MYGKC SL+DA F M +RN VSW A IAGC QN Q +EL+
Sbjct: 181 GLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELF 240
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
VQM + GL Q + S R+C+ + C+ RQLHAH IK+ S + A++ +Y K
Sbjct: 241 VQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKA 300
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
++D AR F + N+ + N ++ G+
Sbjct: 301 GNLVD----------------------------ARRAFIGLPHHNVETCNAMMVGLVRTG 332
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
EAM LF M + D +++ + AC +QG+Q+H +K GF +V V N
Sbjct: 333 LGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRN 392
Query: 350 AILQHQAG-----ELFRLF-------------------------------SLMLASQTKP 373
AIL E + +F + ML S +P
Sbjct: 393 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEP 452
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D T+ V+ ACA + SLE G +H +K+GL LD FV + ++DMY KCG++ A++L
Sbjct: 453 DDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLH 512
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ + ++VSW+S+I G++ EEA + F M GV+P+H T VL C+++ +E
Sbjct: 513 DRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIE 572
Query: 494 EGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G Q++ +I++ E ++ S +VD+ A+ G + ++ + + A D V W +++
Sbjct: 573 LGKQIHGQIIKQE--MLGDEYISSTLVDMYAKCGNMPDSL-LMFEKARKLDFVSWNAMIC 629
Query: 553 SCKTHGN 559
HG
Sbjct: 630 GYALHGQ 636
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 229/545 (42%), Gaps = 101/545 (18%)
Query: 78 IRPSTYADLISACSSL--RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ +T++ L C+S +L G+ H +L S P + N +L MY +CG A
Sbjct: 15 VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74
Query: 136 MVFDEMPQR-------------------------------NVVSWTAMIAGCSQNGQENA 164
VFD MP R +VVSW +I+G Q+G
Sbjct: 75 GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
++ L ++M + G+ D+ T ++++C GL + LG Q+HA +K+ + + + +AL+
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVD 194
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY K + DA F + ++ SWG+ IAG
Sbjct: 195 MYGKCRSLDDALRFFHGMGERNSVSWGA----------------------------AIAG 226
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS- 343
M LF +M L S +C + L Q+H++ IK F S
Sbjct: 227 CVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSD 286
Query: 344 ------------------------------NVPVCNAIL-----QHQAGELFRLFSLMLA 368
NV CNA++ E +LF M
Sbjct: 287 RVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTR 346
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
S D I+ + V ACA + G Q+HC +K+G +DV V N ++D+Y KC +L
Sbjct: 347 SGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVE 406
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A +F ME D VSW+++I Q C E+ + M SG+ P+ T VL AC+
Sbjct: 407 AYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAG 466
Query: 489 VGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+ +E GL ++ + +++ G+ S VVD+ + G + EA+ +++ ++V W
Sbjct: 467 LQSLEYGLVVHGKAIKSGLGLDAFVS--STVVDMYCKCGAITEAQKLHDRIG-GQELVSW 523
Query: 548 KSLLA 552
S+++
Sbjct: 524 NSIIS 528
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 377 TFNDVMGACAAM--ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG------- 427
TF+ + CA+ ++L G H ++ +G FV N L+ MY +CG
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 428 ------------------------SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+A LF M DPDVVSW++LI GY Q G ++ L
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
M GV + TL +L +C + + G+Q++ + + G+ S +VD+
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIH-ALAVKTGLETDVRAGSALVDMYG 197
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
+ + +A F + M + + V W + +A C
Sbjct: 198 KCRSLDDALRFFHGMG-ERNSVSWGAAIAGC 227
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 320/627 (51%), Gaps = 81/627 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRI--------RPSTYAD------LISACSSLRS 95
LF +Q L + F+F +N+ N R + D ++ C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+G++VH + D + +++MY K S+ED VFDEM +NVVSWT+++AG
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
QNG A++L+ QM G+ P+ FTF +++ + V G Q+H VIKS S
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ N+++ MY+K + DA + VF+ ME+ N
Sbjct: 228 IFVGNSMVNMYSKSLMVSDA----------------------------KAVFDSMENRNA 259
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWN++IAG + EA LF M + +++ C + + Q+H
Sbjct: 260 VSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQ 319
Query: 336 IIKKG--FYSNVPVCNAILQHQAGEL---FRLFSLMLASQT------------------- 371
+IK G F N+ + + E+ F+LF +M Q
Sbjct: 320 VIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDR 379
Query: 372 --------------KPDHITFNDVMGACAA-MASLEMGTQLHCYIMKTGLALDVFVMNGL 416
+P+ TF+ V+ ACAA AS+E G Q H +K+G + + V + L
Sbjct: 380 AMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSAL 439
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+ MY K G++ SA E+F D D+VSW+S+I GYAQ GCG+++LK+F MRS + +
Sbjct: 440 VTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDG 499
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+T +GV++AC+H GLV EG + + +M +Y I+PT E SC+VDL +RAG + +A D IN
Sbjct: 500 ITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLIN 559
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
+M F +W++LLA+C+ H NV +G+ AAE ++ + P +SAA VLL NIYA++G W+E
Sbjct: 560 KMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQE 619
Query: 597 VARLMGSMKERGVRKVPGQSWIEIQTK 623
A++ M + V+K G SWIE++ K
Sbjct: 620 RAKVRKLMDMKKVKKEAGYSWIEVKNK 646
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 199/464 (42%), Gaps = 69/464 (14%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
++ +FDE PQ+ + ++ S+N Q A+ L++ + +SG D + +++ C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L +G+Q+H IK + +L+ MY K + + D VF + K++ SW S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ G+ + NE +A+ LFS+M + P+ T
Sbjct: 165 LAGYRQ-----NGLNE-----------------------QALKLFSQMQLEGIKPNPFTF 196
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------------- 357
++L + ++ +G+Q+H+ +IK G S + V N+++ +
Sbjct: 197 AAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMEN 256
Query: 358 --------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
E F LF M K F V+ CA + + QL
Sbjct: 257 RNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQL 316
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVGYAQFGC 456
HC ++K G D+ + LM Y KC + A +LF M +VVSW+++I GY Q G
Sbjct: 317 HCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGR 376
Query: 457 GEEALKLFRRM-RSSGVRPNHVTLVGVLTACSH-VGLVEEGLQLYRIMQNEYGIIPTRER 514
+ A+ LF +M R GV PN T VL AC+ VE+G Q + + G
Sbjct: 377 TDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSC-SIKSGFSNALCV 435
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S +V + A+ G + A + + D D+V W S+++ HG
Sbjct: 436 SSALVTMYAKRGNIESANEVFKRQV-DRDLVSWNSMISGYAQHG 478
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/650 (31%), Positives = 335/650 (51%), Gaps = 133/650 (20%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S ++ L++ C+ RS + +VH I+ S + + N ++++YGKCG ++ AR +FD
Sbjct: 20 SPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDR 79
Query: 141 MPQRNVVSWTA-------------------------------MIAGCSQNGQENAAIELY 169
M +RN+ SW + MI+G Q+G+ + A+ +
Sbjct: 80 MLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYF 139
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
QM G + ++++FGS + AC+GL + LG Q+H+ V +S + S + +AL+ MY+K
Sbjct: 140 AQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC 199
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
R+ A +VF +EM + SWN++I
Sbjct: 200 GRVEYAQSVF----------------------------DEMTVRSRVSWNSLITCYEQNG 231
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK-KGFYSNVPVC 348
+EA+ +F EM + PD +T+ S++ AC + ++ +G QIH+ ++K F +++ +
Sbjct: 232 PVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILG 291
Query: 349 NAILQHQA-----GELFRLFSLM----------------LASQTK-----------PDHI 376
NA+L A E +F +M AS+ K D I
Sbjct: 292 NALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVI 351
Query: 377 TFNDVMGAC-----------------------------------AAMASLEMGTQLHCYI 401
T+N ++ C A +A L++G Q H ++
Sbjct: 352 TWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHV 411
Query: 402 MKTGLAL------DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
+K G DVFV N L+DMY+KCGS+ + +F M + D VSW+++IVGYAQ G
Sbjct: 412 LKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNG 471
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G +AL++F +M SG P+HVT++GVL ACSH GL++EG +R M ++G++P ++
Sbjct: 472 FGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHY 531
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VDLL RAG + EA++ I +M+ D +VW SLLA+CK H N+ +G+ + +L++DP
Sbjct: 532 TCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDP 591
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NS VLL N+YA + W+ V R+ M++RGV K PG SWIEIQ +++
Sbjct: 592 ENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELN 641
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 44/244 (18%)
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
N +++H G+L L D F+ ++ CA S +++H I+K+ A
Sbjct: 4 NGLVKHLKGDLLFL-----------DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFAS 52
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFN---------------------FMEDP-------- 439
+ F+ N L+D+Y KCG + AR+LF+ F++D
Sbjct: 53 ETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP 112
Query: 440 --DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D SW+S+I G+ Q G +EAL F +M G N + L+AC+ + ++ G Q
Sbjct: 113 QVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQ 172
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ ++ + S +VD+ ++ GRV A+ ++M V W SL+ + +
Sbjct: 173 IHSLVYRS-NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSR-VSWNSLITCYEQN 230
Query: 558 GNVD 561
G VD
Sbjct: 231 GPVD 234
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/618 (33%), Positives = 325/618 (52%), Gaps = 71/618 (11%)
Query: 50 LFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
+ S N+ AL+ F D ++N + +A ACS+ + +G + ++
Sbjct: 139 MVSCFANNNMGFRALLTFVDMIENG--YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIK 196
Query: 109 SK-CQPDAVLHNHILNMYGKC-GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ Q D + +++M+ K G L A VF++MP+RN V+WT MI Q G AI
Sbjct: 197 TGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAI 256
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL--ISQNALIA 224
+L++ M+ SG PD+FT +I AC+ + + LG+QLH+ I+ HG L LI
Sbjct: 257 DLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIR--HGLTLDRCVGCCLIN 314
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY K +DG + AR +F+++ N+ SW +I G
Sbjct: 315 MYAKCS-----------------------VDG--SMCAARKIFDQILDHNVFSWTAMITG 349
Query: 285 -VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
V EA+ LF M +IP+ T S L AC + +L G Q+ ++ +K GF S
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS 409
Query: 344 NVPVCNAILQHQA------------------------------------GELFRLFSLML 367
V N+++ A E LF+ +
Sbjct: 410 VNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
TF ++ A++ ++ G Q+H ++K+GL L+ V N L+ MY +CG++
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIE 529
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
SA ++F MED +V+SW+S+I G+A+ G +AL+LF +M GVRPN VT + VL+ACS
Sbjct: 530 SAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACS 589
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
HVGLV EG + ++ M E+G+IP E +C+VD+L R+G + EA FIN M + D +VW
Sbjct: 590 HVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVW 649
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
++ L +C+ HGN+++GK AA+ I++ +P + AA +LL N+YAS KW+EV+ + +MKE+
Sbjct: 650 RTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEK 709
Query: 608 GVRKVPGQSWIEIQTKIH 625
+ K G SW+E++ K+H
Sbjct: 710 XLIKEAGCSWVEVENKVH 727
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 240/520 (46%), Gaps = 73/520 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY+ + C RS +G VH+ + S Q D+V N ++++Y KCG E A +F M
Sbjct: 68 TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLM 127
Query: 142 -PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
R+++SW+AM++ + N A+ +V M+++G P+++ F + RACS V +G
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 201 RQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
+ VIK+ + S + LI M+ K R D+ S
Sbjct: 188 DSIFGFVIKTGYLQSDVCVGCGLIDMFVK--------------GRGDLVS---------- 223
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A VF +M N +W +I + A EA+ LF +M PD T+ ++ A
Sbjct: 224 ---AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISA 280
Query: 320 CTSPLSLYQGMQIHSYIIKKGF-------------YSNVPV----CNA------ILQH-- 354
C + L G Q+HS I+ G Y+ V C A IL H
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 355 -----------QAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q G E LF M+ + P+H TF+ + ACA +A+L +G Q+
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ +K G + V N L+ MY + G + AR+ F+ + + +++S++++I YA+ EE
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV 518
AL+LF + G+ + T +L+ + +G + +G Q++ R++++ G+ + + +
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS--GLKLNQSVCNAL 518
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + +R G + A M D +++ W S++ HG
Sbjct: 519 ISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 206/418 (49%), Gaps = 37/418 (8%)
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
NG+ + AI M+ G PD T+ ++ C +G +H + +S+ ++
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 219 QNALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSMIDGFSKLDFA----RTVFNEMESP 273
N+LI++Y+K + A ++F + + +D+ SW +M+ F+ + T + +E+
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDR---ELIPDGLTVRSLLCACTSPLSLY--- 327
+ A +CS A F +GD +I G ++S +C + ++
Sbjct: 164 YYPNEYCFAAATRACSTAE-----FVSVGDSIFGFVIKTGY-LQSDVCVGCGLIDMFVKG 217
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAI---------LQH-QAGELFRLFSLMLASQTKPDHIT 377
+G + ++ + + +P NA+ +Q AGE LF M+ S +PD T
Sbjct: 218 RGDLVSAFKV----FEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFT 273
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC---GSLGSARELFN 434
+ V+ ACA M L +G QLH ++ GL LD V L++MY KC GS+ +AR++F+
Sbjct: 274 LSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFD 333
Query: 435 FMEDPDVVSWSSLIVGYAQF-GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ D +V SW+++I GY Q G EEAL LFR M + V PNH T L AC+++ +
Sbjct: 334 QILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALR 393
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
G Q++ + G + ++ + AR+GR+ +A + + F+ +++ + +++
Sbjct: 394 IGEQVF-THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD-ILFEKNLISYNTVI 449
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
Query: 341 FYSNVPVCNAILQH-QAGELFRLFSL---MLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
F + P+ ++Q G L + S M+ + PD T++ + C S ++GT
Sbjct: 28 FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFG 455
+H + ++ L LD +N L+ +Y KCG A +F M D++SWS+++ +A
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNN 147
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
G AL F M +G PN ACS V G ++
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 310/585 (52%), Gaps = 63/585 (10%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
R+ YA L+ C L+ GR++H I+++ + + + ++++Y KC +++A
Sbjct: 142 RLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYK 201
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+F+ M +++VSWT ++AG +QNG A++L +QM ++G PD T SI+ A + +
Sbjct: 202 MFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKA 261
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ +GR +H + +S S + NAL+ MY K AR
Sbjct: 262 LRIGRSIHGYAFRSGFESLVNVTNALLDMYFK-----------CGSAR------------ 298
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
AR VF M S + SWNT+I G A + EA + F +M D +P +T+ +
Sbjct: 299 -----IARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGV 353
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L AC + L +G +H + K SNV V N+++
Sbjct: 354 LLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV 413
Query: 354 ---------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
Q G E LF +M + K D T V+ A A + +H
Sbjct: 414 TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLA 473
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ + +VFV L+DMY KCG++ +AR+LF+ M++ V++W+++I GY G G+E L
Sbjct: 474 VRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETL 533
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF M+ V+PN +T + V++ACSH G VEEGL L++ MQ +Y + PT + S +VDL
Sbjct: 534 DLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDL 593
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAG++ +A +FI +M I V ++L +CK H NV++G++AA+ + K+DP
Sbjct: 594 LGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYH 653
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIYAS+ W++VA++ +M+++G+ K PG SW+E++ +IH
Sbjct: 654 VLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHT 698
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/643 (31%), Positives = 326/643 (50%), Gaps = 70/643 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C ++ A +V ++ + D W+ + N + ++ ++ + I
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY--AHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+S C++ L++G + H I+ K + + N +++MY KCG+LEDAR +F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R+ V+W +I Q+ E+ A +L+ +M G++ D S ++AC+ + + G+
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +K L + ++LI MY+K I DA
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA-------------------------- 583
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
R VF+ + ++ S N +IAG S +N EA+ LF EM R + P +T +++ AC
Sbjct: 584 --RKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 322 SPLSLYQGMQIHSYIIKKGF---------------------------YSNVPVCNAIL-- 352
P SL G Q H I K+GF +S + +I+
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 353 ------QHQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q G E + + M PD TF V+ C+ ++SL G +H I
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVGYAQFGCGEEALK 462
LD N L+DMY KCG + + ++F+ M +VVSW+SLI GYA+ G E+ALK
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+F MR S + P+ +T +GVLTACSH G V +G +++ +M +YGI + +C+VDLL
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G + EA+DFI D +W SLL +C+ HG+ G+ +AE +++++P NS+A V
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYV 940
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL NIYAS G WE+ L M++RGV+KVPG SWI+++ + H
Sbjct: 941 LLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTH 983
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 246/546 (45%), Gaps = 73/546 (13%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
+ + F ++ + ST ++SA + +L LG VH + + + + +++M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y KC +E A VF+ + ++N V W AMI G + NG+ + +EL++ M SG D FTF
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
S++ C+ + +G Q H+ +IK + +L NAL+ MY K + DA +F +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+D +WNTII N +EA LF M
Sbjct: 492 RDNV----------------------------TWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF----------------------- 341
++ DG + S L ACT LYQG Q+H +K G
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 342 ---YSNVP-----VCNAIL----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+S++P NA++ Q+ E LF ML P ITF ++ AC
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 390 SLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPD-VVSWSSL 447
SL +GTQ H I K G + + ++ L+ MY+ + A LF+ + P +V W+ +
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
+ G++Q G EEALK ++ MR GV P+ T V VL CS + + EG ++ ++ +
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH 763
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
+ + ++D+ A+ G + + ++M ++V W SL+ +G A
Sbjct: 764 DLDELTSNT-LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG-------YA 815
Query: 568 ENILKI 573
E+ LKI
Sbjct: 816 EDALKI 821
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 232/518 (44%), Gaps = 76/518 (14%)
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+L++G+ VH L + L N I+++Y KC + A FD + +++V +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
S G+ + +V + ++ + P++FTF ++ C+ V GRQ+H +IK
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF----------------- 257
+ AL+ MY K DRI DA VF I + W + G+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 258 ---------------------SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
KL AR +F EM SP++ +WN +I+G A+
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
F M + T+ S+L A +L G+ +H+ IK G SN+ V ++++
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 353 --------------------------------QHQAGELFRLFSLMLASQTKPDHITFND 380
++ ++ LF M +S D TF
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ CAA LEMG+Q H I+K LA ++FV N L+DMY KCG+L AR++F M D D
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
V+W+++I Y Q EA LF+RM G+ + L L AC+HV + +G Q++
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH- 552
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ + G+ S ++D+ ++ G + +A + +
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 192/424 (45%), Gaps = 65/424 (15%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+PD + ++N Y + G L+DAR++F EM +VV+W MI+G + G E AIE +
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M +S + + T GS++ A + + LG +HA IK S++ ++L++MY+K ++
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ A VF ++ K+ VF WN +I G A +
Sbjct: 378 MEAAAKVFEALEEKN------------------DVF----------WNAMIRGYAHNGES 409
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
++ M LF +M D T SLL C + L G Q HS IIKK N+ V NA+
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNAL 469
Query: 352 LQHQA------------------------------------GELFRLFSLMLASQTKPDH 375
+ A E F LF M D
Sbjct: 470 VDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+ AC + L G Q+HC +K GL D+ + L+DMY KCG + AR++F+
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+ + VVS ++LI GY+Q EEA+ LF+ M + GV P+ +T ++ AC + G
Sbjct: 590 LPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG 648
Query: 496 LQLY 499
Q +
Sbjct: 649 TQFH 652
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 202/498 (40%), Gaps = 70/498 (14%)
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------LISQNALI 223
V + S M D F+F +R S LGR+++ HV+ S H + Q L
Sbjct: 5 VLLTPSSAMFDSFSF---VRRLS--YSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLF 59
Query: 224 AMYTKFD----RILDAWNVFSSIARKD----ITSWG----SMIDGFSK---LDFARTVFN 268
FD R+ A + ++ K I S G +++D ++K + +A F+
Sbjct: 60 KSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD 119
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+E ++ +WN++++ +S + + F + + ++ P+ T +L C ++
Sbjct: 120 FLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEF 178
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMG 383
G QIH +IK G N A++ A + R+F ++ P+ + + +
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV----DPNTVCWTCLFS 234
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
E + + G D +++ Y++ G L AR LF M PDVV+
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVA 294
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY---- 499
W+ +I G+ + GC A++ F MR S V+ TL VL+A V ++ GL ++
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 500 ---------------------RIMQNEYGIIPTRERRSCV-----VDLLARAGRVHEAED 533
M+ + E ++ V + A G H+ +
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414
Query: 534 FINQM---AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYA 589
M ++ D + SLL++C ++++G + I+K N L ++YA
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 590 SSGKWEEVARLMGSMKER 607
G E+ ++ M +R
Sbjct: 475 KCGALEDARQIFERMCDR 492
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 18/228 (7%)
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+L +G +H + G+ + + N ++D+Y KC + A + F+F+E DV +W+S++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
Y+ G + L+ F + + + PN T VL+ C+ VE G Q++ M I
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IK 188
Query: 510 PTRERRS----CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVD 561
ER S +VD+ A+ R+ +A + + D + V W L + G V
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
V +R + + D A V + N Y GK ++ L G M V
Sbjct: 248 VFERMRDEGHRPD---HLAFVTVINTYIRLGKLKDARLLFGEMSSPDV 292
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/645 (29%), Positives = 332/645 (51%), Gaps = 70/645 (10%)
Query: 23 ELCMLLDQAGEVVDSFLRRFDDIWD-FD-LFSSLCKQNLYNEAL-VAFDFLQNNTNFRIR 79
+L L + G + ++ R F+ I D D L+ ++ K N +L A FL ++
Sbjct: 86 KLVSLFSKYGSINEA-ARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 80 PSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P Y L+ C L+ G+++H ++++ + ++NMY KC ++DA +
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD MP+R++VSW +IAG SQNG A+EL ++M G PD T +++ A + + +
Sbjct: 205 FDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
+G+ +H + I++ + AL MY+K +
Sbjct: 265 MVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSV------------------------- 299
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+ AR +F+ M+ + SWN+++ G +A+++F +M + + P G+T+ L
Sbjct: 300 ---ETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEAL 356
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
AC L +G +H ++ + S++ V N+++
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416
Query: 353 -----------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ E FS M + KPD T V+ A A ++ +H I
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+++ L ++FV L+DMY KCG++ AR+LF+ + D V++W+++I GY G G AL
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF +M+ V PN +T + V++ACSH GLV+EGL+ ++ M+ +YG+ P+ + +VDL
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAGR+ EA DFI M I V+ ++L +CK H N++VG++AA+ + +++P
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYH 656
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIYAS+ KW +VA + +M+++G++K PG S +E++ ++H+
Sbjct: 657 VLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHS 701
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/567 (23%), Positives = 251/567 (44%), Gaps = 84/567 (14%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+ C+S++ L ++ ++ + + + +++++ K GS+ +A VF+ +
Sbjct: 53 AVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ + M+ G ++N A+ +M + P + F +++ C + G+++
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +I + +++ + ++ MY K +I DA+ +F + +D+ SW ++I GFS+ FA
Sbjct: 170 HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFA 229
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
+ +A+ L M D PD +T+ ++L A
Sbjct: 230 K----------------------------KALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------------------- 354
L G IH Y I+ GF V + A+
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 355 ----QAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
Q GE + +F ML P +T + + ACA + LE G +H ++ + L
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG 381
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D+ VMN L+ MY KC + A ++FN + VSW+++I+GYAQ G EAL F M
Sbjct: 382 SDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVDLLAR 524
+S G++P+ T+V V+ A + + + ++ ++ + I T + +VD+ ++
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT----TALVDMYSK 497
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK-----IDPTNSA 579
G +H A + M D ++ W +++ THG +G+ A + K ++P +
Sbjct: 498 CGAIHMARKLFD-MISDRHVITWNAMIDGYGTHG---LGRAALDLFDKMKKGAVEPNDIT 553
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKE 606
L ++ + SG +E R SMK+
Sbjct: 554 YLSVISAC-SHSGLVDEGLRHFKSMKQ 579
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 312/637 (48%), Gaps = 65/637 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L D A V D F+ L + + +Y+EAL FD L + TY
Sbjct: 51 CNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYP 110
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ AC LR + LG+ +H ++ D V+ + ++ MY KC E A +FDEMP +
Sbjct: 111 SVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDK 170
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V W +I+ Q+G+ A+ + M + G PD T + I +C+ L + GR++H
Sbjct: 171 DVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIH 230
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
++ S AL+ MY K +L+ A
Sbjct: 231 KELVNSGFRMDSFVSAALVDMYGKC----------------------------GQLEMAI 262
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF +M + + +WN++I G + + LF M + P T+ S L AC+
Sbjct: 263 EVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSA 322
Query: 325 SLYQGMQIHSYIIKKGFYS------------------------------------NVPVC 348
L +G +H YII+ NV +
Sbjct: 323 QLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMIS 382
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+ + + + RLF M S +PD ITF V+ AC+ +A+LE G ++H I++ L
Sbjct: 383 GYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGN 442
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ VM L+DMY KCG++ A +F + + D+VSW+S+I Y G EAL+LF M
Sbjct: 443 NEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEML 502
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
S V+P+ VT + +L+ACSH GLV++GL + M N YGIIP E SC++ LL RAGR+
Sbjct: 503 QSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRL 562
Query: 529 HEAEDFI-NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
HEA + + + DD + +L ++C+ H N+D+G AEN++ DP +S+ ++L N+
Sbjct: 563 HEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNM 622
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
YAS GKW+EV + MK+ G++K PG SWIEI KI
Sbjct: 623 YASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKI 659
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW-SSLI 448
SL+ G LH ++ GL DV+V L+ +YV C A+ +F+ +E+P +S + L+
Sbjct: 18 SLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLM 77
Query: 449 VGYAQFGCGEEALKLFRR-MRSSGVRPNHVTLVGVLTACS-----------HVGLVEEGL 496
GY + +EAL LF + M ++P+ T VL AC H LV+EGL
Sbjct: 78 AGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGL 137
Query: 497 QLYRIMQNEY-GIIPTRERRSCVVDLL------------------ARAGRVHEAEDFINQ 537
+ ++ + G+ C V L ++G+ EA +
Sbjct: 138 MVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGM 197
Query: 538 M---AFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL----KIDPTNSAALVLLCNIYAS 590
M F+ D V + ++SC ++D G+ + ++ ++D SAALV ++Y
Sbjct: 198 MRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALV---DMYGK 254
Query: 591 SGKWEEVARLMGSMKERGV 609
G+ E + M + V
Sbjct: 255 CGQLEMAIEVFEQMPNKTV 273
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 215/707 (30%), Positives = 344/707 (48%), Gaps = 102/707 (14%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
+ C +D + + D +R DI+ ++ + + CK + +A V F +
Sbjct: 50 YAKCNAIDASRRLFDQMPKR--DIYTWNAILGAYCKASELEDAHVLFAEMPERNIV---- 103
Query: 81 STYADLISA------CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
++ LISA C +L ++ GR+ H + + + N +L MY KC + DA
Sbjct: 104 -SWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDA 162
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
F ++P+ N VS+TAM+ G + + Q N A L+ ML++ + D + S++ CS
Sbjct: 163 IQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRG 222
Query: 195 CC--VGL------------GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
C GL G+Q+H IK S L N+L+ MY K + A +F
Sbjct: 223 GCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFV 282
Query: 241 SIARKDITSWGSMIDGFSK--------------------------------------LDF 262
++ + SW MI G+ + ++
Sbjct: 283 NMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEA 342
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
R +F+ M SP+L+SWNTI++G + N EA+ LF EM R + PD T+ +L +
Sbjct: 343 GRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAG 402
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------------QH 354
+ L G Q+H+ K F +++ + + ++
Sbjct: 403 MMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSM 462
Query: 355 QAG--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
AG E F F M P ++ V+ CA ++SL G Q+H I + G
Sbjct: 463 MAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGY 522
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D FV + L+DMY KCG + +AR +F+ M + V+W+ +I GYAQ GCG+EA+ L+
Sbjct: 523 MNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYED 582
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M SG +P+ +T V VLTACSH GLV+ G++++ MQ E+G+ P + +C++D L RAG
Sbjct: 583 MIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAG 642
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+HEAE I++M D ++W+ LL+SC+ + +V + +RAAE + +DP NSA VLL N
Sbjct: 643 RLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLAN 702
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGNDISG 633
IY+S G+W++ + M V K PG SWIE + + A D +G
Sbjct: 703 IYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDDNG 749
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 230/493 (46%), Gaps = 54/493 (10%)
Query: 81 STY-ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+TY A L+ C ++ G+ +H H+L S+ D L N ++ Y KC +++ +R +FD
Sbjct: 5 TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64
Query: 140 EMPQRNVVSWTAMI-AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR--ACSGLCC 196
+MP+R++ +W A++ A C + E+A + L+ +M + ++ ++ R AC L
Sbjct: 65 QMPKRDIYTWNAILGAYCKASELEDAHV-LFAEMPERNIVSWNTLISALTRNGACGALVD 123
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V GR+ H IK +++ NAL+ MY K I DA F +
Sbjct: 124 VECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPE------------ 171
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
PN S+ ++ G+A NEA LF M + D +++ S+
Sbjct: 172 ----------------PNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSV 215
Query: 317 LCACT----SPLSLY----------QGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELF 360
L C+ L+ G Q+H IK GF S++ + N++L A G +
Sbjct: 216 LGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMD 275
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
++ + + +++N ++ + + + G D ++
Sbjct: 276 SA-EMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC 334
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
+K G + + R++F+ M P + SW++++ GY+Q +EA+KLFR M+ V P+ TL
Sbjct: 335 IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLA 394
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR-ERRSCVVDLLARAGRVHEAEDFINQMA 539
+L++ + + L+E G Q++ + Q + T S ++ + ++ G+V A+ +++A
Sbjct: 395 IILSSLAGMMLLEGGRQVHAVSQK--AVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIA 452
Query: 540 FDDDIVVWKSLLA 552
+ DIV W S++A
Sbjct: 453 -ELDIVCWNSMMA 464
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 296/580 (51%), Gaps = 64/580 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + ++ C++ SL+ G+ +H L S C+ D L +++MY KCG++ DA VF ++
Sbjct: 53 TLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI 112
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+VV+W+AMI G Q G A EL+ M + G P+QFT S++ + + + G+
Sbjct: 113 RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H + K S + N LI MY K + D
Sbjct: 173 SIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDG-------------------------- 206
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
VF M +P+L SWN +++G +F +M P+ T S+L +C+
Sbjct: 207 --NKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCS 264
Query: 322 SPLSLYQGMQIHSYIIKKG------------------------------------FYSNV 345
S L G Q+H++IIK F V
Sbjct: 265 SLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTV 324
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ QA + + F M KP+ T + C+ MA+LE G QLH +K G
Sbjct: 325 IISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAG 384
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
D+FV + L+D+Y KCG + A +F + D+VSW+++I GY+Q G GE+AL+ FR
Sbjct: 385 HFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFR 444
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M S G+ P+ T +GVL+ACS +GLVEEG + + M YGI P+ E +C+VD+L RA
Sbjct: 445 MMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRA 504
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G+ +E + FI +M ++W+++L +CK HGNVD G++AA+ + +++P ++ +LL
Sbjct: 505 GKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLS 564
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NI+AS G+W++V + M RG++K PG SW+E+ ++H
Sbjct: 565 NIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVH 604
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 210/476 (44%), Gaps = 73/476 (15%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
+E A +F MP++N VSW A++ G +Q G ++L+ +M + +FT ++++
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ + G+ LHA ++S +L+ MY+K + DA VF+ I D+ +W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+MI G + + EA LF M + P+
Sbjct: 121 SAMITGLDQQ----------------------------GHGQEAAELFHLMRRKGARPNQ 152
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------ 352
T+ SL+ T+ L G IH I K GF S+ V N ++
Sbjct: 153 FTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEA 212
Query: 353 ------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
G R+F ML KP+ TF V+ +C+++ E G
Sbjct: 213 MTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFG 272
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
Q+H +I+K D FV L+DMY K L A F+ + + D+ SW+ +I GYAQ
Sbjct: 273 KQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQT 332
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM--QNEYGIIPTR 512
E+A+K FR+M+ G++PN TL L+ CSH+ +E G QL+ + +G I
Sbjct: 333 DQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFV- 391
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
S +VDL + G + AE + DIV W ++++ HG G++A E
Sbjct: 392 --GSALVDLYGKCGCMEHAEAIFKGL-ISRDIVSWNTIISGYSQHGQ---GEKALE 441
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 156/348 (44%), Gaps = 44/348 (12%)
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
F+ T+ ++ +CSSL + G++VH HI+ + D + +++MY K LEDA
Sbjct: 249 FKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAG 308
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+ FD + R++ SWT +I+G +Q Q A++ + QM + G+ P+++T S + CS +
Sbjct: 309 VAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMA 368
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ GRQLHA +K+ H + +AL+ +Y K + A +F + +DI SW
Sbjct: 369 TLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW----- 423
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
NTII+G + +A+ F M ++PD T
Sbjct: 424 -----------------------NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIG 460
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQ 370
+L AC+ + +G + + K Y P C + +AG+ + +
Sbjct: 461 VLSACSFMGLVEEGKKRFDSMSK--IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMN 518
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
P + + V+GAC +++ G + A +F M +MD
Sbjct: 519 LTPYSLIWETVLGACKLHGNVDFGEK---------AAKKLFEMEPMMD 557
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 6/185 (3%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + L+ AG D + R DI+ + + S Q ++A A + + I+
Sbjct: 296 DMYAKARCLEDAGVAFDRLVNR--DIFSWTVIISGYAQT--DQAEKAVKYFRQMQREGIK 351
Query: 80 PSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P+ Y A +S CS + +L+ GR++H + + D + + ++++YGKCG +E A +
Sbjct: 352 PNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAI 411
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F + R++VSW +I+G SQ+GQ A+E + ML G+MPD+ TF ++ ACS + V
Sbjct: 412 FKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLV 471
Query: 198 GLGRQ 202
G++
Sbjct: 472 EEGKK 476
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 206/640 (32%), Positives = 328/640 (51%), Gaps = 72/640 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
LD+A +V + R W+ L S +NEAL + +N + P +Y +
Sbjct: 225 LDKARKVFEEMPLRDVVSWN-SLISGYNANGYWNEALEIYYRFRN---LGVVPDSYTMSS 280
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ AC L S++ G +H I + D +++N +L+MY K L D R +FD+M R+
Sbjct: 281 VLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 340
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VSW MI G SQ G +I+L+++M+ PD T SI++AC L + G+ +H
Sbjct: 341 AVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHD 399
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++I S + + N LI MY K +L + VFS + KD S
Sbjct: 400 YMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVS---------------- 443
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
WN++I + +EAM LF +M ++ PD +T LL T
Sbjct: 444 ------------WNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 490
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL------------------------ 359
L G ++H + K GF SN+ V N ++ A GE+
Sbjct: 491 LXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 550
Query: 360 ----------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
R+ S M PD T ++ C+ +A+ G ++H I K GL D
Sbjct: 551 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD 610
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V V N L++MY KCGSL ++ ++F M+ DVV+W++LI +G G++A++ F M +
Sbjct: 611 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA 670
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
+G+ P+HV V ++ ACSH GLVEEGL + M+ +Y I P E +CVVDLL+R+ +
Sbjct: 671 AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLD 730
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
+AEDFI M D +W +LL++C+ G+ ++ +R +E I++++P ++ VL+ N+YA
Sbjct: 731 KAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYA 790
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGN 629
+ GKW++V + S+K RG++K PG SW+EIQ K++ G
Sbjct: 791 ALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGT 830
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 265/557 (47%), Gaps = 76/557 (13%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHIL 107
+ +L L++EAL + Q R++P TY +I+AC+ L ++ + +HD +L
Sbjct: 145 IIRALTHNGLFSEALSLYSETQR---IRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 201
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
D + N +++MY + L+ AR VF+EMP R+VVSW ++I+G + NG N A+E
Sbjct: 202 XMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE 261
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
+Y + G++PD +T S++RAC GL V G +H + K +I N L++MY
Sbjct: 262 IYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYC 321
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
KF+ ++D +F + +D SW +MI G+S++
Sbjct: 322 KFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYE----------------------- 358
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
E++ LF EM + + PD LT+ S+L AC L G +H Y+I G+ +
Sbjct: 359 -----ESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 412
Query: 348 CNAILQHQAG------------------------------------ELFRLFSLMLASQT 371
N ++ A E +LF M+ +
Sbjct: 413 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDV 471
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
KPD +T+ ++ + L +G +LHC + K G ++ V N L+DMY KCG +G + +
Sbjct: 472 KPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLK 531
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
+F M+ D+++W+++I L++ RMR+ GV P+ T++ +L CS +
Sbjct: 532 VFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAA 591
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+G +++ + + G+ + ++++ ++ G + + M D+V W +L+
Sbjct: 592 KRQGKEIHGCI-FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALI 649
Query: 552 ASCKTHGNVDVGKRAAE 568
++C +G GK+A
Sbjct: 650 SACGMYGE---GKKAVR 663
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 160/631 (25%), Positives = 279/631 (44%), Gaps = 92/631 (14%)
Query: 12 PRWCCEYWD----AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF 67
P C Y+D +EL + +G VD R F L++ +
Sbjct: 15 PDASCRYYDWIKNLYELKSRVHSSGNYVDHQRREF-----------YTSTKLFSRVMKTL 63
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
L + R + ++ + A +S + K+H I++ + ++ Y
Sbjct: 64 RVLHECS----RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH 119
Query: 128 CGSLEDARMVFD-EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
+ VF P NV W ++I + NG + A+ LY + + L PD +TF S
Sbjct: 120 FRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPS 179
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+I AC+GL + + +H V+ GS L NALI MY +F+ + A VF + +D
Sbjct: 180 VINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 239
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
+ SW S+I G++ + W NEA+ ++ + +
Sbjct: 240 VVSWNSLISGYNANGY---------------W-------------NEALEIYYRFRNLGV 271
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------- 353
+PD T+ S+L AC S+ +G IH I K G +V V N +L
Sbjct: 272 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 331
Query: 354 --------------------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
Q G E +LF + + +Q KPD +T ++ AC +
Sbjct: 332 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF-MEMVNQFKPDLLTITSILQACGHLGD 390
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
LE G +H Y++ +G D N L++MY KCG+L +++E+F+ M+ D VSW+S+I
Sbjct: 391 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 450
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y Q G +EA+KLF+ M++ V+P+ VT V +L+ + +G + G +L+ + + G
Sbjct: 451 YIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLA-KMGFNS 508
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+ +VD+ A+ G + ++ M DI+ W +++ASC + ++G R +
Sbjct: 509 NIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIASCVHSEDCNLGLRMISRM 567
Query: 571 LKIDPTNSAALVL----LCNIYASSGKWEEV 597
T A +L +C++ A+ + +E+
Sbjct: 568 RTEGVTPDMATMLSILPVCSLLAAKRQGKEI 598
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 322/643 (50%), Gaps = 69/643 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L Q ++ D + +W+ L S K + E++ F +Q T+
Sbjct: 417 CGDLVQGRKIFDKIMNDKVFLWNL-LMSEYAKIGNFRESVSLFKKMQK-LGVVGNCYTFT 474
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ ++L ++ ++VH ++L + + N ++ Y K G +E A +FDE+ +
Sbjct: 475 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP 534
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+VVSW +MI GC NG +E+++QML G+ D T S++ A + + + LGR LH
Sbjct: 535 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALH 594
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+K+ ++ N L+ MY+K L+ A
Sbjct: 595 GFGVKACFSEEVVFSNTLLDMYSKC----------------------------GNLNGAT 626
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF +M + SW + IA ++A+ LF EM + + PD TV S++ AC
Sbjct: 627 EVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 686
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------------------- 356
SL +G +HSY+IK G SN+PV NA++ A
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 357 --------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
E LF L + Q KPD IT V+ ACA +A+L+ G ++H +I++ G
Sbjct: 747 GYSQNSLPNEALELF-LDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 805
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ V L+DMY KCG L A+ LF+ + D++SW+ +I GY G G EA+ F MR
Sbjct: 806 DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 865
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+G+ P+ + +L ACSH GL+ EG + + M+NE G+ P E +CVVDLLAR G +
Sbjct: 866 IAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNL 925
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
+A FI M D +W LL+ C+ H +V + ++ AE+I +++P N+ V+L N+Y
Sbjct: 926 SKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVY 985
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK--IHASGN 629
A + KWEEV +L M++RG ++ PG SWIE+ K I +GN
Sbjct: 986 AEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGN 1028
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 99/187 (52%), Gaps = 12/187 (6%)
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
++ V+ CA SLE G ++H I+ G+++D + L+ MYV CG L R++F+ +
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ V W+ L+ YA+ G E++ LF++M+ GV N T VL + +G V+E
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490
Query: 497 QLY-RIMQNEYGIIPTRERRSCVVDLLARA----GRVHEAEDFINQMAFDDDIVVWKSLL 551
+++ +++ +G + VV+ L A G V A + ++++ + D+V W S++
Sbjct: 491 RVHGYVLKLGFG------SNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMI 543
Query: 552 ASCKTHG 558
C +G
Sbjct: 544 NGCVVNG 550
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 189/609 (31%), Positives = 329/609 (54%), Gaps = 69/609 (11%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
Q G V D+ R FD + + ++FS C Y E + F +L N R +
Sbjct: 57 QTGCVEDA-RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLF-YLMVNEGVRPDHFVF 114
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
+ ACS L++ ++G+ V+D++LS + ++ + IL+M+ KCG ++ AR F+E+
Sbjct: 115 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 174
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++V W M++G + G+ A+ ++ +M+ G+ P+ T S + AC+ L + GR++
Sbjct: 175 KDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 234
Query: 204 HAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
H + IK E S L+ N+L+ Y K + +
Sbjct: 235 HGYCIKVEELDSDLLVGNSLVDYYAKCRSV----------------------------EV 266
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR F ++ +L SWN ++A ++ F++ GD + +
Sbjct: 267 ARRKFGMIKQTDLVSWNAMLA-----------VTGFTQYGDGK----------------A 299
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAGELFRLFSL---MLASQTKPDHIT 377
L +Q M I + + +V V N+I+ Q+G L M S + + +T
Sbjct: 300 ALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVT 359
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ AC+ +A+L G ++H +I++ GL F++N L+DMY +CGS+ +R +F+ M
Sbjct: 360 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D+VSW+ +I Y G G +A+ LF++ R+ G++PNH+T +L+ACSH GL+EEG +
Sbjct: 420 QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK 479
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+++M+ EY + P E+ +C+VDLL+RAG+ +E +FI +M F+ + VW SLL +C+ H
Sbjct: 480 YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIH 539
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N D+ + AA + +++P +S VL+ NIY+++G+WE+ A++ MKERGV K PG SW
Sbjct: 540 CNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSW 599
Query: 618 IEIQTKIHA 626
IE++ K+H+
Sbjct: 600 IEVKRKLHS 608
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 225/483 (46%), Gaps = 65/483 (13%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
YA ++ C L +L+LG +VH ++ + L + +L +Y + G +EDAR +FD+M
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RNV SWTA++ G I+L+ M+ G+ PD F F + +ACS L +G+
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF-SKLD 261
++ +++ + + +++ M+ K R+ A F I KD+ W M+ G+ SK +
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F + A+++F +M + P+ +T+ S + ACT
Sbjct: 193 FKK-----------------------------ALNVFRKMVLEGVKPNSITIASAVSACT 223
Query: 322 SPLSLYQGMQIHSYIIK-KGFYSNVPVCNAILQHQAGELFRLFSLMLASQ-----TKPDH 375
+ L G +IH Y IK + S++ V N+++ + A + S+ +A + + D
Sbjct: 224 NLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA----KCRSVEVARRKFGMIKQTDL 279
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+++N AM ++ TQ AL+ F M++ C +F+
Sbjct: 280 VSWN-------AMLAVTGFTQYG----DGKAALEFF-----QRMHIACS-------VFSE 316
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+ DVV W+S+I AQ G AL L R M S V N VT+V L ACS + + +G
Sbjct: 317 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 376
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
++++ + G+ + ++D+ R G + ++ + M D+V W +++
Sbjct: 377 KEIHQFII-RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMISVYG 434
Query: 556 THG 558
HG
Sbjct: 435 MHG 437
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 101/196 (51%), Gaps = 16/196 (8%)
Query: 371 TKPDHIT--FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
T PD + ++ C + +L +G Q+H ++ G+ + F+ + L+++Y + G +
Sbjct: 4 TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 63
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
AR +F+ M + +V SW++++ Y G EE +KLF M + GVRP+H V ACS
Sbjct: 64 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 123
Query: 489 VGLVEEGLQLYRIMQNEYGIIPT--RERRSCV----VDLLARAGRVHEAEDFINQMAFDD 542
L+ YR+ ++ Y + + E SCV +D+ + GR+ A F ++ F
Sbjct: 124 -------LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF-K 175
Query: 543 DIVVWKSLLASCKTHG 558
D+ +W +++ + G
Sbjct: 176 DVFMWNIMVSGYTSKG 191
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 296/539 (54%), Gaps = 52/539 (9%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D + + +++M + G L AR VFD + ++ VV WT +I+ Q A+E+++ L
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ G PD++T S+I AC+ L V LG QLH+ ++ S L+ MY K
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK----- 301
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG-VASCSNAN 292
S+I + +D+A VF M ++ SW +I+G V S N
Sbjct: 302 ------SNIEQA--------------MDYANKVFERMRKNDVISWTALISGYVQSGVQEN 341
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+ M LF EM + + P+ +T S+L AC + G Q+H+++IK + V NA++
Sbjct: 342 KVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALV 401
Query: 353 QHQAG-----ELFRLF---------SLMLASQTKP-DH-----------ITFNDVMGACA 386
A E R+F S + + P DH TF ++ A A
Sbjct: 402 SMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAA 461
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
++ L G QLH +K G D FV N L+ MY +CG L A FN ++D +V+SW+S
Sbjct: 462 SVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTS 521
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I G A+ G E AL LF M +GV+PN VT + VL+ACSHVGLV EG + +R MQ ++
Sbjct: 522 MISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDH 581
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
G+IP E +C+VDLLAR+G V EA +FIN+M D +VWK+LL +C++H N++VG+ A
Sbjct: 582 GLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIA 641
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A+N+++++P + A VLL N+YA +G W+EVAR+ +M++ + K G SW+E++ H
Sbjct: 642 AKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTH 700
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 232/507 (45%), Gaps = 84/507 (16%)
Query: 96 LQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-RNVVSWTAMI 153
L+LGR +H +L DAV+ N +L +Y +CG++ AR VFD M R++VSWTAM
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGLGRQLHAHVIKSE 211
+ ++NG E ++ L +ML+SGL+P+ +T ++ AC L C+ G L
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEME 271
G+ + +ALI M + + A VF + K + W +I +R V E
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLI--------SRYVQGE-- 233
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
C A EA+ +F + + PD T+ S++ ACT S+ G+Q
Sbjct: 234 ----------------C--AEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ 275
Query: 332 IHSYIIKKGFYSNVPV-------------------CNAILQH------------------ 354
+HS ++ GF S+ V N + +
Sbjct: 276 LHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQ 335
Query: 355 ---QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q ++ LF ML KP+HIT++ ++ ACA ++ + G Q+H +++K+ A
Sbjct: 336 SGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHT 395
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+ MY + G + AR +FN + + ++S + G +A L R+
Sbjct: 396 VGNALVSMYAESGCMEEARRVFNQLYERSMISCITE---------GRDA-PLDHRIGRMD 445
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+ + T +++A + VG++ +G QL+ M + G R + +V + +R G + +A
Sbjct: 446 MGISSSTFASLISAAASVGMLTKGQQLH-AMTLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHG 558
N++ D +++ W S+++ HG
Sbjct: 505 CRSFNELK-DRNVISWTSMISGLAKHG 530
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 179/377 (47%), Gaps = 56/377 (14%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLY-NEALVAFDFLQNNTNFRIRPS--TYA 84
+D A +V + +R+ D I L S + + N+ +V F + N + I+P+ TY+
Sbjct: 308 MDYANKVFER-MRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNES---IKPNHITYS 363
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ AC+++ GR+VH H++ S + N +++MY + G +E+AR VF+++ +R
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+++S C G++ A ++ + + G+ TF S+I A + + + G+QLH
Sbjct: 424 SMIS-------CITEGRD-APLDHRIGRMDMGI--SSSTFASLISAAASVGMLTKGQQLH 473
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
A +K+ GS N+L++MY++ + DA F+ + +++ SW SMI G +K +
Sbjct: 474 AMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY-- 531
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
A A+SLF +M + P+ +T ++L AC+
Sbjct: 532 --------------------------AERALSLFHDMILTGVKPNDVTYIAVLSACSHVG 565
Query: 325 SLYQGMQI-------HSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
+ +G + H I + Y+ C L ++G + + K D +
Sbjct: 566 LVREGKEYFRSMQRDHGLIPRMEHYA----CMVDLLARSGLVKEALEFINEMPLKADALV 621
Query: 378 FNDVMGACAAMASLEMG 394
+ ++GAC + ++E+G
Sbjct: 622 WKTLLGACRSHDNIEVG 638
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 327/651 (50%), Gaps = 105/651 (16%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+A ++ ++ GR VH I+ L N+++ Y K GSL A VFDEMP
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 143 QRNV-------------------------------VSWTAMIAGCSQNGQENAAIELYVQ 171
++ VSWTA+I G +Q G + AI ++ +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M+ + P QFT +++ +C+ + +GR++H+ V+K GS + +L+ MY K
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ A VF + K+I++W ++I + + + A + F +M ++ SWN++I+G +
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 289 SNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
EA+++FS+M + L PD T+ S+L AC + L G QIH+YI++ ++ V
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 348 CNAILQHQAG----ELFRL--------------FSLMLASQT-----KPDHITFN----- 379
NA++ A E+ RL F+ +L T KP FN
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 380 DVMG----------------------------------ACAAMAS-------LEMGTQLH 398
DV+ AAM S LE G Q+H
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCG 457
+K G + V N L+ MY K G++ A+ +F+ ++VSW+S+I+ AQ G G
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
+EA+ LF RM S G++P+H+T VGVL+AC+HVGLVE+G + Y +M + I PT +C
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++DL RAG + EA FI M + D + W SLLASCK H N D+ K AAE +L IDP N
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
S A + L N+Y++ GKWE A+ MK+RGVRK G SWI I+ ++HA G
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFG 663
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 239/517 (46%), Gaps = 101/517 (19%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILS---SKCQPDAVLHNHILNMYGKCGSL 131
R+ PS T ++++S+C++ ++L +GRK+H ++ C P A +LNMY KCG
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVAT---SLLNMYAKCGDP 193
Query: 132 EDARMVFD-------------------------------EMPQRNVVSWTAMIAGCSQNG 160
A++VFD +MP R++VSW +MI+G SQ G
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253
Query: 161 QENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
A+ ++ +ML + L PD FT SI+ AC+ L + +G+Q+HA+++++E +
Sbjct: 254 YNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313
Query: 220 NALIAMYTK-----FDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEME 271
NALI+MY K R++ N S++ +I ++ S++DG++KL AR +FN++
Sbjct: 314 NALISMYAKSGGVEIARLIVEHNRTSNL---NIIAFTSLLDGYTKLGNVKPAREIFNKLR 370
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
++ +W +I G N+A+ LF M + P+ T+ ++L +S L G Q
Sbjct: 371 DRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 332 IHSYIIKKGFYSNVPVCNAIL------------------------------------QHQ 355
IH+ IK G S V NA++ QH
Sbjct: 431 IHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG 490
Query: 356 AG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
G E LF ML+ KPDHIT+ V+ AC + +E G + + + +
Sbjct: 491 LGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHY 550
Query: 415 G-LMDMYVKCGSLGSARELFNFME----DPDVVSWSSLIVGYAQFGCGEEALKLFRRMR- 468
++D+Y + G L +E + F+E +PD ++W SL+ + A R+
Sbjct: 551 ACMIDLYGRAGLL---QEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL 607
Query: 469 -SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
G ++ L V +AC G E Q ++M++
Sbjct: 608 IDPGNSGAYLALANVYSAC---GKWENAAQTRKLMKD 641
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 53 SLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILS-S 109
+L + L EA+ F+ + + ++P TY ++SAC+ + ++ GRK ++ +
Sbjct: 485 ALAQHGLGKEAINLFERM---LSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH 541
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP-QRNVVSWTAMIAGC 156
+ +P + ++++YG+ G L++A + + MP + + ++W +++A C
Sbjct: 542 EIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASC 589
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 194/600 (32%), Positives = 318/600 (53%), Gaps = 63/600 (10%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILS----------SKCQPDAVLHNHILNMYG 126
R PS L+ C +L+SL R +H ++ SK VL H
Sbjct: 1 RNHPSL--SLLHXCKTLQSL---RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHF----- 50
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
L A VFD + + ++ W M G + + +A++LYV M+ GL+P+ +TF
Sbjct: 51 --DGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPF 108
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++++C+ G+QLH V+K L +LI+MY + R+ DA V + +D
Sbjct: 109 LLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRD 168
Query: 247 ITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+ S+ ++I G++ ++ A +F+E+ ++ SWN I+G A N EA+ LF +M
Sbjct: 169 VVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK 228
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL-- 359
+ PD T+ ++L AC S+ G Q+HS+I GF N+ + NA+ L + GEL
Sbjct: 229 TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELET 288
Query: 360 --------------------------------FRLFSLMLASQTKPDHITFNDVMGACAA 387
LF ML S KP+ +T ++ ACA
Sbjct: 289 ACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAH 348
Query: 388 MASLEMGTQLHCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+ ++++G +H YI K G+ + L+DMY KCG + +A+++F+ M + + SW+
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWN 408
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
++I G+A G A +F RMR +G+ P+ +T VG+L+ACSH G+++ G ++R M +
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRD 468
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
Y ++P E C++DL +G EAE IN M + D V+W SLL +CK HGNV++G+
Sbjct: 469 YKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGES 528
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A+N++KI+P N + VLL NIYA++ +W EVA+ + ++G++KVPG S IEI + +H
Sbjct: 529 YAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 588
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 170/374 (45%), Gaps = 46/374 (12%)
Query: 35 VDSFLRRFDDIWDFDL------FSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
++S + FD+I D+ S + Y EAL F + TN R ST ++S
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK-TNVRPDESTMVTVLS 243
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ S++LGR+VH I + + N ++++Y KCG LE A +F + ++V+S
Sbjct: 244 ACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVIS 303
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +I G + A+ L+ ML+SG P+ T SI+ AC+ L + +GR +H ++
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYID 363
Query: 209 KSEHGSHLIS--QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
K G S + +LI MY K I A VF S+ + ++SW +MI GF
Sbjct: 364 KRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGF--------- 414
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
A AN A +FS M + PD +T LL AC+ L
Sbjct: 415 -------------------AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGML 455
Query: 327 YQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLAS-QTKPDHITFND 380
G I + + Y +P C L +G LF+ M+ + + +PD + +
Sbjct: 456 DLGRHIFRSMTRD--YKLMPKLEHYGCMIDLXGHSG-LFKEAEKMINTMEMEPDGVIWCS 512
Query: 381 VMGACAAMASLEMG 394
++ AC ++E+G
Sbjct: 513 LLKACKMHGNVELG 526
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V DS L R W+ +F ++ A AFD I
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA----MHGRANAAFDIFSRMRKNGIE 436
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSS-----KCQPDAVLHNHILNMYGKCGSLE 132
P T+ L+SACS L LGR HI S K P + ++++ G G +
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGR----HIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFK 492
Query: 133 DARMVFDEMP-QRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+A + + M + + V W +++ C +G E Y Q L
Sbjct: 493 EAEKMINTMEMEPDGVIWCSLLKACKMHGNVELG-ESYAQNL 533
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 305/579 (52%), Gaps = 67/579 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++SA L LG ++H ++ S P + N ++NMY K G + A F P+ +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC---CVGLGRQ 202
++SW MI+ +QN E AI + +L+ GL PDQFT S++RACS LG Q
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H + IK + ALI +Y+K ++ +A + K DF
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL-----------------HGKYDF 1062
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
+LASWN I+ G + + +A+ FS M + + D +T+ + + A
Sbjct: 1063 -----------DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGC 1111
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF-------------- 360
++L QG QI +Y IK GF +++ V + +L A ELF
Sbjct: 1112 LINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTM 1171
Query: 361 --------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
++ LM S +PD TF ++ A + + +LE G Q+H ++K
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY 1231
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+LD FV L+DMY KCGS+ A +F M+ VV W+++++G AQ G +EAL LFR
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRT 1291
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+S+G++P+ VT +GVL+ACSH GL E + + M YGI P E SC+VD L RAG
Sbjct: 1292 MQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAG 1351
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EAE+ I M F ++++LL +C+T G+ + KR A+ +L +DP++S+A VLL N
Sbjct: 1352 RIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
IYA+S +W++V MK + V+K PG SWI+++ K+H
Sbjct: 1412 IYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVH 1450
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 134/556 (24%), Positives = 245/556 (44%), Gaps = 95/556 (17%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+Q+ VH + + + D + ++N+Y K G + AR++FD+MP+R+ V W M+
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS----- 210
+N ++ A+ + +SG PD +I + V R+ HA +K+
Sbjct: 793 YVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKAYAMKM 850
Query: 211 ---EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI-------------------- 247
+ GS++ + N + + +I+ A + F ++ R I
Sbjct: 851 FPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910
Query: 248 ------------TSWG-------SMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGV 285
+S+ S+++ +SK A F +L SWNT+I+
Sbjct: 911 DLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSY 970
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS---LYQGMQIHSYIIKKGFY 342
A + EA+ F ++ L PD T+ S+L AC++ G Q+H Y IK G
Sbjct: 971 AQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII 1030
Query: 343 SNVPVCNAILQ------------------------------------HQAGELFRLFSLM 366
++ V A++ +++ + FSLM
Sbjct: 1031 NDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
D IT + A + +L+ G Q+ Y +K G D++V +G++DMY+KCG +
Sbjct: 1091 HEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDM 1150
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
+A ELF + PD V+W+++I GY + G + AL ++ MR SGV+P+ T ++ A
Sbjct: 1151 PNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKAS 1210
Query: 487 SHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
S + +E+G Q++ +++ +Y + + +VD+ + G V +A +M +V
Sbjct: 1211 SCLTALEQGKQIHANVVKLDYSL--DHFVGTSLVDMYCKCGSVQDAYRVFRKMDV-RKVV 1267
Query: 546 VWKSLLASCKTHGNVD 561
W ++L HG+VD
Sbjct: 1268 FWNAMLLGLAQHGHVD 1283
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 219/479 (45%), Gaps = 49/479 (10%)
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
++ L+LG++ H I++S PD L N+++ MY KCGSL AR VFD+ R++V+W +
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 152 MIAGCSQ---NGQENA--AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
++A +Q + EN L+ + + G + T +++ C V + +H +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+K L AL+ +Y K+ + A R +
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQA----------------------------RLL 774
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS- 325
F++M + WN ++ S +EA+ FS PD + ++ S +S
Sbjct: 775 FDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSN 834
Query: 326 --LYQGMQIHSYIIKKGFY---SNVPVCNAILQH--QAGELFRL---FSLMLASQTKPDH 375
Q+ +Y +K + SN+ N L AG++ F +L S D
Sbjct: 835 NRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+T ++ A L++G Q+H ++K+ A V V N LM+MY K G + +A + F
Sbjct: 895 VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE- 494
+ D++SW+++I YAQ EA+ FR + G++P+ TL VL ACS E
Sbjct: 955 SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYF 1014
Query: 495 --GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
G Q++ + + GII + ++DL ++ G++ EAE F+ +D D+ W +++
Sbjct: 1015 TLGSQVH-VYAIKCGIINDSFVSTALIDLYSKGGKMDEAE-FLLHGKYDFDLASWNAIM 1071
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 35/282 (12%)
Query: 46 WDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLG 99
+DFDL S K N +AL F L + I T A I A L +L+ G
Sbjct: 1060 YDFDLASWNAIMFGYIKSNKSRKALEHFS-LMHEMGIPIDEITLATAIKASGCLINLKQG 1118
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+++ + + D + + +L+MY KCG + +A +F E+ + + V+WT MI+G +N
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIEN 1178
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G E+ A+ +Y M SG+ PD++TF ++I+A S L + G+Q+HA+V+K ++
Sbjct: 1179 GDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVG 1238
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
+L+ MY K + DA+ V F K+D + VF WN
Sbjct: 1239 TSLVDMYCKCGSVQDAYRV------------------FRKMDVRKVVF----------WN 1270
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
++ G+A + +EA++LF M + PD +T +L AC+
Sbjct: 1271 AMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 11/174 (6%)
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
AMA L++G + H I+ +G D ++ N L+ MY KCGSL SAR++F+ D D+V+W+S
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 447 LIVGYAQFGCGE-----EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE--EGLQLY 499
++ YAQF E +LF +R G +TL +L C G V+ E + Y
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ + G +V++ + G V +A ++M + D V+W +L +
Sbjct: 743 AV---KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 159/391 (40%), Gaps = 66/391 (16%)
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
R+ + + LG++ HA ++ S N LI MY+K + A VF + +D+
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+W S++ +++ FA + S N E LF + RE
Sbjct: 679 TWNSILAAYAQ--FADS---------------------SYENVLEGFRLFGLL--REF-- 711
Query: 309 DGLTVRSLLCACTSPLSLYQGM-----QIHSYIIKKGFYSNVPVCNAI--------LQHQ 355
G ++ L A L L G +H Y +K GF ++ V A+ L Q
Sbjct: 712 -GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQ 770
Query: 356 AGELFR--------LFSLMLASQTKPDHITFND----VMGACAAMASLEMGTQLHCYIMK 403
A LF L+++ML + + +F D A + LHC I
Sbjct: 771 ARLLFDKMPERDAVLWNVMLKAYVEN---SFQDEALRFFSAFHRSGFXPDFSNLHCVI-- 825
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G+ DV VK A ++F F + ++ +W+ + + G A+
Sbjct: 826 GGVNSDVSNNRKRHAEQVKA----YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDC 881
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F+ + S + + VTLV +L+A ++ G Q++ ++ P + ++++ +
Sbjct: 882 FKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNMYS 940
Query: 524 RAGRVHEAED-FINQMAFDDDIVVWKSLLAS 553
+AG V+ AE FIN D++ W ++++S
Sbjct: 941 KAGVVYAAEKTFINSPEL--DLISWNTMISS 969
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 185/564 (32%), Positives = 306/564 (54%), Gaps = 32/564 (5%)
Query: 67 FDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYG 126
FDFL+ + + C R+L+ R + D + + D V N +L+ Y
Sbjct: 29 FDFLERHD------------LRGCVRYRNLRAARLLFDQM----PERDVVSWNAMLSGYA 72
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
+ G +++A+ +FDEMP +N +SW M+A QNG+ A L+ L+ G
Sbjct: 73 QNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGG 132
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++ + G+ ++ + E +S N +I+ Y + +L+A +F +D
Sbjct: 133 YVKRNRLVDARGIFDRMPE---RDE-----VSWNTMISGYAQNGELLEAQRLFEESPVRD 184
Query: 247 ITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+ +W +M+ G+ + LD AR VF+ M N SWN IIAG C ++A LF M
Sbjct: 185 VFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC 244
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRL 362
+ + + +++ + Q + ++ S + Q GE L
Sbjct: 245 QNVS----SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHL 300
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M + + TF + CA +A+LE+G Q+H ++K GL +V N L+ MY K
Sbjct: 301 FVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCK 360
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG++ A +F +E+ +VVSW+++I GYA+ G G+EAL LF M+ +G+ P+ VT+VGV
Sbjct: 361 CGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGV 420
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSH GLV++G + + M +YGI + +C++DLL RAGR+ +A++ + M F+
Sbjct: 421 LSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEP 480
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D W +LL + + HGN ++G++AA+ I +++P NS VLL N+YA+SG+W +V R+
Sbjct: 481 DAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRL 540
Query: 603 SMKERGVRKVPGQSWIEIQTKIHA 626
M++RGV+KVPG SW+E+Q KIH
Sbjct: 541 RMRDRGVKKVPGYSWVEVQNKIHT 564
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 305/579 (52%), Gaps = 67/579 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++SA L LG ++H ++ S P + N ++NMY K G + A F P+ +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC---CVGLGRQ 202
++SW MI+ +QN E AI + +L+ GL PDQFT S++RACS LG Q
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H + IK + ALI +Y+K ++ +A + K DF
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL-----------------HGKYDF 1062
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
+LASWN I+ G + + +A+ FS M + + D +T+ + + A
Sbjct: 1063 -----------DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGC 1111
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF-------------- 360
++L QG QI +Y IK GF +++ V + +L A ELF
Sbjct: 1112 LINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTM 1171
Query: 361 --------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
++ LM S +PD TF ++ A + + +LE G Q+H ++K
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY 1231
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+LD FV L+DMY KCGS+ A +F M+ VV W+++++G AQ G +EAL LFR
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRT 1291
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+S+G++P+ VT +GVL+ACSH GL E + + M YGI P E SC+VD L RAG
Sbjct: 1292 MQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAG 1351
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EAE+ I M F ++++LL +C+T G+ + KR A+ +L +DP++S+A VLL N
Sbjct: 1352 RIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
IYA+S +W++V MK + V+K PG SWI+++ K+H
Sbjct: 1412 IYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVH 1450
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/556 (24%), Positives = 245/556 (44%), Gaps = 95/556 (17%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+Q+ VH + + + D + ++N+Y K G + AR++FD+MP+R+ V W M+
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS----- 210
+N ++ A+ + +SG PD +I + V R+ HA +K+
Sbjct: 793 YVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKAYAMKM 850
Query: 211 ---EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI-------------------- 247
+ GS++ + N + + +I+ A + F ++ R I
Sbjct: 851 FPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910
Query: 248 ------------TSWG-------SMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGV 285
+S+ S+++ +SK A F +L SWNT+I+
Sbjct: 911 DLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSY 970
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS---LYQGMQIHSYIIKKGFY 342
A + EA+ F ++ L PD T+ S+L AC++ G Q+H Y IK G
Sbjct: 971 AQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII 1030
Query: 343 SNVPVCNAILQ------------------------------------HQAGELFRLFSLM 366
++ V A++ +++ + FSLM
Sbjct: 1031 NDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
D IT + A + +L+ G Q+ Y +K G D++V +G++DMY+KCG +
Sbjct: 1091 HEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDM 1150
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
+A ELF + PD V+W+++I GY + G + AL ++ MR SGV+P+ T ++ A
Sbjct: 1151 PNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKAS 1210
Query: 487 SHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
S + +E+G Q++ +++ +Y + + +VD+ + G V +A +M +V
Sbjct: 1211 SCLTALEQGKQIHANVVKLDYSL--DHFVGTSLVDMYCKCGSVQDAYRVFRKMDV-RKVV 1267
Query: 546 VWKSLLASCKTHGNVD 561
W ++L HG+VD
Sbjct: 1268 FWNAMLLGLAQHGHVD 1283
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 219/479 (45%), Gaps = 49/479 (10%)
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
++ L+LG++ H I++S PD L N+++ MY KCGSL AR VFD+ R++V+W +
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 152 MIAGCSQ---NGQENA--AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
++A +Q + EN L+ + + G + T +++ C V + +H +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+K L AL+ +Y K+ + A R +
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQA----------------------------RLL 774
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS- 325
F++M + WN ++ S +EA+ FS PD + ++ S +S
Sbjct: 775 FDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSN 834
Query: 326 --LYQGMQIHSYIIKKGFY---SNVPVCNAILQH--QAGELFRL---FSLMLASQTKPDH 375
Q+ +Y +K + SN+ N L AG++ F +L S D
Sbjct: 835 NRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+T ++ A L++G Q+H ++K+ A V V N LM+MY K G + +A + F
Sbjct: 895 VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE- 494
+ D++SW+++I YAQ EA+ FR + G++P+ TL VL ACS E
Sbjct: 955 SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYF 1014
Query: 495 --GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
G Q++ + + GII + ++DL ++ G++ EAE F+ +D D+ W +++
Sbjct: 1015 TLGSQVH-VYAIKCGIINDSFVSTALIDLYSKGGKMDEAE-FLLHGKYDFDLASWNAIM 1071
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 35/282 (12%)
Query: 46 WDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLG 99
+DFDL S K N +AL F L + I T A I A L +L+ G
Sbjct: 1060 YDFDLASWNAIMFGYIKSNKSRKALEHFS-LMHEMGIPIDEITLATAIKASGCLINLKQG 1118
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+++ + + D + + +L+MY KCG + +A +F E+ + + V+WT MI+G +N
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIEN 1178
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G E+ A+ +Y M SG+ PD++TF ++I+A S L + G+Q+HA+V+K ++
Sbjct: 1179 GDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVG 1238
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
+L+ MY K + DA+ V F K+D + VF WN
Sbjct: 1239 TSLVDMYCKCGSVQDAYRV------------------FRKMDVRKVVF----------WN 1270
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
++ G+A + +EA++LF M + PD +T +L AC+
Sbjct: 1271 AMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 11/174 (6%)
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
AMA L++G + H I+ +G D ++ N L+ MY KCGSL SAR++F+ D D+V+W+S
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 447 LIVGYAQFGCGE-----EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE--EGLQLY 499
++ YAQF E +LF +R G +TL +L C G V+ E + Y
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ + G +V++ + G V +A ++M + D V+W +L +
Sbjct: 743 AV---KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 159/391 (40%), Gaps = 66/391 (16%)
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
R+ + + LG++ HA ++ S N LI MY+K + A VF + +D+
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+W S++ +++ FA + S N E LF + RE
Sbjct: 679 TWNSILAAYAQ--FADS---------------------SYENVLEGFRLFGLL--REF-- 711
Query: 309 DGLTVRSLLCACTSPLSLYQGM-----QIHSYIIKKGFYSNVPVCNAI--------LQHQ 355
G ++ L A L L G +H Y +K GF ++ V A+ L Q
Sbjct: 712 -GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQ 770
Query: 356 AGELFR--------LFSLMLASQTKPDHITFND----VMGACAAMASLEMGTQLHCYIMK 403
A LF L+++ML + + +F D A + LHC I
Sbjct: 771 ARLLFDKMPERDAVLWNVMLKAYVEN---SFQDEALRFFSAFHRSGFFPDFSNLHCVI-- 825
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G+ DV VK A ++F F + ++ +W+ + + G A+
Sbjct: 826 GGVNSDVSNNRKRHAEQVKA----YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDC 881
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F+ + S + + VTLV +L+A ++ G Q++ ++ P + ++++ +
Sbjct: 882 FKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNMYS 940
Query: 524 RAGRVHEAED-FINQMAFDDDIVVWKSLLAS 553
+AG V+ AE FIN D++ W ++++S
Sbjct: 941 KAGVVYAAEKTFINSPEL--DLISWNTMISS 969
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 301/550 (54%), Gaps = 44/550 (8%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++++Y L +A ++F + V++W ++I + + A+ +V+M SG PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF---DRILDAWN 237
F S++++C+ + + G +H +++ L + NAL+ MY K + N
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 238 VFSSIARKDITSWGSMIDGFS-----KLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
VF + ++ S + + +D R VF M ++ S+NTIIAG A
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+A+ + EMG +L PD T+ S+L + + + +G +IH Y+I+KG S+V + ++++
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 353 QHQA------------------------------------GELFRLFSLMLASQTKPDHI 376
A E RLF M+ ++ KP +
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
F+ V+ ACA +A+L +G QLH Y+++ G ++F+ + L+DMY KCG++ +AR++F+ M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
D VSW+++I+G+A G G EA+ LF M+ GV+PN V V VLTACSHVGLV+E
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ M YG+ E + V DLL RAG++ EA +FI++M + VW +LL+SC
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
H N+++ ++ AE I +D N A VL+CN+YAS+G+W+E+A+L M+++G+RK P S
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584
Query: 617 WIEIQTKIHA 626
WIE++ K H
Sbjct: 585 WIEMKNKTHG 594
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 180/381 (47%), Gaps = 56/381 (14%)
Query: 35 VDSFLRRFD-----DIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
+DS R F+ D+ ++ + + + +Y +AL + T+ + T + ++
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLP 250
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
S + G+++H +++ D + + +++MY K +ED+ VF + R+ +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +++AG QNG+ N A+ L+ QM+ + + P F S+I AC+ L + LG+QLH +V+
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
+ GS++ +AL+ MY+K I A R +F+
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAA----------------------------RKIFD 402
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
M + SW II G A + +EA+SLF EM + + P+ + ++L AC+ +
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS-----HV 457
Query: 329 GMQIHSYIIKKGFY---SNVPVCNAILQH---------QAGELFRLFSLMLASQTKPDHI 376
G+ ++ G++ + V N L+H +AG+L ++ + +P
Sbjct: 458 GLVDEAW----GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGS 513
Query: 377 TFNDVMGACAAMASLEMGTQL 397
++ ++ +C+ +LE+ ++
Sbjct: 514 VWSTLLSSCSVHKNLELAEKV 534
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 191/475 (40%), Gaps = 121/475 (25%)
Query: 57 QNLYNEALVAFDFLQNN---TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
Q+L+++AL +F ++ + + + PS ++ +C+ + L+ G VH I+
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPS----VLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 114 DAVLHNHILNMYGKC---GSLEDARMVFDEMPQR-------------------------- 144
D N ++NMY K GS VFDEMPQR
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 145 -------NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
+VVS+ +IAG +Q+G A+ + +M + L PD FT S++ S V
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+++H +VI+ S + ++L+ MY K RI D+ VFS + +D SW
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW------- 311
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
N+++AG NEA+ LF +M ++ P + S++
Sbjct: 312 ---------------------NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------------- 351
AC +L+ G Q+H Y+++ GF SN+ + +A+
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV 410
Query: 352 ----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
L E LF M KP+ + F V+ AC+ + ++ +
Sbjct: 411 SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Query: 402 MKTGLALDVFVMNGLMDMYVKC----GSLGSARELFNFME----DPDVVSWSSLI 448
K V+ +N ++ Y G G E +NF+ +P WS+L+
Sbjct: 471 TK------VYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 293/542 (54%), Gaps = 64/542 (11%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++++Y L +A +VF + V++W ++I + + A+ +V+M SG PD
Sbjct: 45 VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPD 104
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
F S++++C+ + + G +H +++ L + NAL+ MY+K I
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGI-------- 156
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
D R VF M ++ S+NT+IAG A +A+ + E
Sbjct: 157 --------------------DSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVRE 196
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---- 356
MG +L PD T+ S+L + + + +G +IH Y+I+KG S+V + ++++ A
Sbjct: 197 MGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 256
Query: 357 --------------------------------GELFRLFSLMLASQTKPDHITFNDVMGA 384
E RLF M++++ +P + F+ V+ A
Sbjct: 257 IEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPA 316
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA +A+L +G QLH Y+++ G ++F+ + L+DMY KCG++ +AR++F+ M D VSW
Sbjct: 317 CAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSW 376
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+++I+G+A G G EA+ LF M+ GV+PN V V VLTACSHVGLV+E + M
Sbjct: 377 TAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 436
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
YG+ E + V DLL RAG++ EA DFI++M + VW +LL+SC H N+++ +
Sbjct: 437 VYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAE 496
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
+ AE I ID N A VL+CN+YAS+G+W+E+A+L ++++G+RK P SWIE++ K
Sbjct: 497 KVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKT 556
Query: 625 HA 626
H
Sbjct: 557 HG 558
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 190/433 (43%), Gaps = 73/433 (16%)
Query: 57 QNLYNEALVAFDFLQNN---TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
Q+L++ AL +F ++ + + + PS ++ +C+ + L+ G VH I+
Sbjct: 83 QSLFSRALASFVEMRASGRCPDHNVFPS----VLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D N ++NMY K ++ R VF+ MP+++VVS+ +IAG +Q+G A+ + +M
Sbjct: 139 DLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMG 198
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
S L PD FT S++ S V G+++H +VI+ S + ++L+ MY K RI
Sbjct: 199 TSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 258
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
D+ VFS + R+D SW N+++AG NE
Sbjct: 259 DSERVFSHLYRRDSISW----------------------------NSLVAGYVQNGRYNE 290
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-- 351
A+ LF +M ++ P + S++ AC +L+ G Q+H Y+++ GF N+ + +A+
Sbjct: 291 ALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVD 350
Query: 352 ----------------------------------LQHQAGELFRLFSLMLASQTKPDHIT 377
L E LF M KP+ +
Sbjct: 351 MYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 410
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
F V+ AC+ + ++ + K GL ++ + D+ + G L A + + M
Sbjct: 411 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKM 470
Query: 437 E-DPDVVSWSSLI 448
+P WS+L+
Sbjct: 471 RVEPTGSVWSTLL 483
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 75/414 (18%)
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
++I+ + + +QLHA I+++ SH S + +I++YT + +A VF +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSH-TSASIVISIYTNLKLLHEALLVFKT---- 64
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+ESP + +W ++I S + A++ F EM
Sbjct: 65 ------------------------LESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASG 100
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------ 353
PD S+L +CT + L G +H +I++ G ++ NA++
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVR 160
Query: 354 ---------------------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
Q+G + R+ M S KPD T + V+ +
Sbjct: 161 KVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYV 220
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+ G ++H Y+++ G+ DV++ + L+DMY K + + +F+ + D +SW+SL+
Sbjct: 221 DVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVA 280
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYG- 507
GY Q G EAL+LFR+M S+ VRP V V+ AC+H+ + G QL+ +++ +G
Sbjct: 281 GYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGR 340
Query: 508 --IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
I S +VD+ ++ G + A ++M D+ V W +++ HG+
Sbjct: 341 NIFIA-----SALVDMYSKCGNIQAARKIFDRMNLHDE-VSWTAIIMGHALHGH 388
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 326/651 (50%), Gaps = 105/651 (16%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+A ++ ++ GR VH I+ L N+++ Y K GSL A VFDEMP
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 143 QRNV-------------------------------VSWTAMIAGCSQNGQENAAIELYVQ 171
++ VSWTA+I G +Q G + AI ++ +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M+ + P QFT +++ +C+ + +GR++H+ V+K GS + +L+ MY K
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ A VF + K+I++W ++I + + + A + F +M ++ SWN++I+G +
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 289 SNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
EA+ +FS+M + L PD T+ S+L AC + L G QIH+YI++ ++ V
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 348 CNAILQHQAG----ELFRL--------------FSLMLASQT-----KPDHITFN----- 379
NA++ A E+ RL F+ +L T KP FN
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 380 DVMG----------------------------------ACAAMAS-------LEMGTQLH 398
DV+ AAM S LE G Q+H
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCG 457
+K G + V N L+ MY K G++ A+ +F+ ++VSW+S+I+ AQ G G
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
+EA+ LF RM S G++P+H+T VGVL+AC+HVGLVE+G + Y +M + I PT +C
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++DL RAG + EA FI M + D + W SLLASCK H N D+ K AAE +L IDP N
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
S A + L N+Y++ GKWE A+ MK+RGVRK G SWI I+ ++HA G
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFG 663
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 239/517 (46%), Gaps = 101/517 (19%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILS---SKCQPDAVLHNHILNMYGKCGSL 131
R+ PS T ++++S+C++ ++L +GRK+H ++ C P A +LNMY KCG
Sbjct: 137 RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVAT---SLLNMYAKCGDP 193
Query: 132 EDARMVFD-------------------------------EMPQRNVVSWTAMIAGCSQNG 160
A++VFD +MP R++VSW +MI+G SQ G
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253
Query: 161 QENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
A+ ++ +ML + L PD FT SI+ AC+ L + +G+Q+HA+++++E +
Sbjct: 254 YNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313
Query: 220 NALIAMYTK-----FDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEME 271
NALI+MY K R++ N S++ +I ++ S++DG++KL AR +FN++
Sbjct: 314 NALISMYAKSGGVEIARLIVEHNRTSNL---NIIAFTSLLDGYTKLGNVKPAREIFNKLR 370
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
++ +W +I G N+A+ LF M + P+ T+ ++L +S L G Q
Sbjct: 371 DRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 332 IHSYIIKKGFYSNVPVCNAIL------------------------------------QHQ 355
IH+ IK G S V NA++ QH
Sbjct: 431 IHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG 490
Query: 356 AG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
G E LF ML+ KPDHIT+ V+ AC + +E G + + + +
Sbjct: 491 LGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHY 550
Query: 415 G-LMDMYVKCGSLGSARELFNFME----DPDVVSWSSLIVGYAQFGCGEEALKLFRRMR- 468
++D+Y + G L +E + F+E +PD ++W SL+ + A R+
Sbjct: 551 ACMIDLYGRAGLL---QEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL 607
Query: 469 -SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
G ++ L V +AC G E Q ++M++
Sbjct: 608 IDPGNSGAYLALANVYSAC---GKWENAAQTRKLMKD 641
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 53 SLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILS-S 109
+L + L EA+ F+ + + ++P TY ++SAC+ + ++ GRK ++ +
Sbjct: 485 ALAQHGLGKEAINLFERM---LSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH 541
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP-QRNVVSWTAMIAGC 156
+ +P + ++++YG+ G L++A + + MP + + ++W +++A C
Sbjct: 542 EIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASC 589
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 330/641 (51%), Gaps = 73/641 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L +A V D W+ L + L K ++ ++ F + + + + T++
Sbjct: 142 CGDLKEASRVFDEVKIEKALFWNI-LMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFS 199
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ + SSLRS+ G ++H IL S + N ++ Y K ++ AR VFDEM +R
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V+SW ++I G NG + ++VQML SG+ D T S+ C+ + LGR +H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LD 261
+ +K A +++ DR + +++D +SK LD
Sbjct: 320 SIGVK--------------ACFSREDRFCN-----------------TLLDMYSKCGDLD 348
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A+ VF EM ++ S+ ++IAG A A EA+ LF EM + + PD TV ++L C
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------- 356
L +G ++H +I + ++ V NA++ A
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 357 -----------GELFRLFSLMLASQT-KPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E LF+L+L + PD T V+ ACA++++ + G ++H YIM+
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G D V N L+DMY KCG+L A LF+ + D+VSW+ +I GY G G+EA+ LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+MR +G+ + ++ V +L ACSH GLV+EG + + IM++E I PT E +C+VD+LAR
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
G + +A FI M D +W +LL C+ H +V + ++ AE + +++P N+ VL+
Sbjct: 649 TGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLM 708
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA + KWE+V RL + +RG+RK PG SWIEI+ +++
Sbjct: 709 ANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 200/644 (31%), Positives = 316/644 (49%), Gaps = 67/644 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D A V D + + D W + + + E L FD ++ N RI
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWG-TMMAGYAHNGCFVEVLELFDKMKLG-NVRIN 328
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+ A + L+ G+++H L + D ++ ++ MY KCG E A+ +F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ R++V+W+A+IA Q G A+ L+ +M + P++ T SI+ AC+ L + L
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +H +K++ S L + AL++MY K GF
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKC--------------------------GF-- 480
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A T FN M S ++ +WN++I G A + A+ +F ++ + PD T+ ++ A
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
C L QG IH I+K GF S+ V NA++
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 353 ----------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
A E F M P+ +TF V+ A A +A+ G H I+
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ G + V N L+DMY KCG L + +LFN M+ D VSW++++ GYA G G+ A+
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M+ S V+ + V+ V VL+AC H GLVEEG +++ M ++Y I P E +C+VDLL
Sbjct: 721 LFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLL 780
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG E FI M + D VW +LL SC+ H NV +G+ A ++++K++P N A V
Sbjct: 781 GRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFV 840
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+L +IYA SG+W + + M + G++K PG SW+E++ K+HA
Sbjct: 841 VLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHA 884
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 256/567 (45%), Gaps = 69/567 (12%)
Query: 29 DQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
D A V DS +W+ + + + YNEAL + + T+ ++
Sbjct: 80 DLARSVFDSTPNPSRILWN-SMIRAYTRSKQYNEALEMY-YCMVEKGLEPDKYTFTFVLK 137
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ +LQ G H I + D + +++MY K G L+ AR VFD+MP+R+VV+
Sbjct: 138 ACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVA 197
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W AMIAG SQ+ A++ + M G+ P + ++ L + L R +H +V
Sbjct: 198 WNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVF 257
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
+ + S + N LI +Y+K + A VF + +D SWG+M
Sbjct: 258 RRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTM--------------- 300
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+AG A E + LF +M + + ++ S A + L +
Sbjct: 301 -------------MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347
Query: 329 GMQIHSYIIKKGFYSNVPVCNAIL--------QHQAGELF-------------------- 360
G +IH +++ S++ V ++ +A +LF
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 361 --------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
LF M + KP+ +T ++ ACA ++ L++G +HC+ +K + D+
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
L+ MY KCG +A FN M D+V+W+SLI GYAQ G A+ +F ++R S +
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI 527
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
P+ T+VGV+ AC+ + +++G ++ ++ + G ++ ++D+ A+ G + AE
Sbjct: 528 NPDAGTMVGVVPACALLNDLDQGTCIHGLIV-KLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGN 559
N+ F D V W ++A+ +G+
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGH 613
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 161/626 (25%), Positives = 282/626 (45%), Gaps = 88/626 (14%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--D 85
L +A EV D +R W+ + + L + EA+ DF ++ + PS+ + +
Sbjct: 180 LKRAREVFDKMPKRDVVAWN-AMIAGLSQSEDPCEAV---DFFRSMQLVGVEPSSVSLLN 235
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L L +++L R +H ++ + + N ++++Y KCG ++ AR VFD+M ++
Sbjct: 236 LFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRVFDQMVDQD 293
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VSW M+AG + NG +EL+ +M + ++ + S A + + G+++H
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++ S ++ L+ MY K A +F WG
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLF----------WG-------------- 389
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
++ +L +W+ IIA + EA+SLF EM ++++ P+ +T+ S+L AC
Sbjct: 390 ----LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------------------- 353
L G IH + +K S++ A++
Sbjct: 446 LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLING 505
Query: 354 -HQAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
Q G+ + +F + S PD T V+ ACA + L+ GT +H I+K G D
Sbjct: 506 YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
V N L+DMY KCGSL SA LFN + D V+W+ +I Y Q G +EA+ F +MR
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMR 625
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
PN VT V VL A +++ EG+ + + + G + + ++D+ A+ G++
Sbjct: 626 LENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII-QMGFLSNTLVGNSLIDMYAKCGQL 684
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA-------AENILKIDPTNSAAL 581
+E N+M D V W ++L+ HG+ G RA E+ ++ID + ++
Sbjct: 685 DYSEKLFNEMD-HKDTVSWNAMLSGYAVHGH---GDRAIALFSLMQESQVQIDSVSFVSV 740
Query: 582 VLLCNIYASSGKWEEVARLMGSMKER 607
+ C +G EE ++ SM ++
Sbjct: 741 LSACR---HAGLVEEGRKIFHSMSDK 763
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 225/498 (45%), Gaps = 58/498 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L+S+C L L ++H I+ S + + H++N+Y + AR VFD P
Sbjct: 35 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTP 90
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+ + W +MI +++ Q N A+E+Y M++ GL PD++TF +++AC+G + G
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK--- 259
H + + + L+ MY+K + A VF + ++D+ +W +MI G S+
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 260 ----LDFARTVFNEMESPNLASWNTIIAGVASCSN--------------------ANEAM 295
+DF R++ P+ S + G+ SN +N +
Sbjct: 211 PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLI 270
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ 355
L+S+ GD ++ R + + G + Y F
Sbjct: 271 DLYSKCGDVDV------ARRVFDQMVDQDDVSWGTMMAGYAHNGCFV------------- 311
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
E+ LF M + + ++ A A LE G ++H ++ + D+ V
Sbjct: 312 --EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
LM MY KCG A++LF ++ D+V+WS++I Q G EEAL LF+ M++ ++PN
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Query: 476 HVTLVGVLTACSHVGLVEEG--LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
VTL+ +L AC+ + L++ G + + + + + T + +V + A+ G A
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST---GTALVSMYAKCGFFTAALT 486
Query: 534 FINQMAFDDDIVVWKSLL 551
N+M+ DIV W SL+
Sbjct: 487 TFNRMS-SRDIVTWNSLI 503
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 157/349 (44%), Gaps = 52/349 (14%)
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
IT ++ F K D AR+VF+ +P+ WN++I NEA+ ++ M ++ L
Sbjct: 66 ITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGL 125
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFR--- 361
PD T +L ACT L+L +G+ H I ++G +V + ++ + G+L R
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185
Query: 362 -------------------------------LFSLMLASQTKPDHITFNDVMGACAAMAS 390
F M +P ++ ++ +++
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
+E+ +H Y+ + + V NGL+D+Y KCG + AR +F+ M D D VSW +++ G
Sbjct: 246 IELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG 303
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY------RIMQN 504
YA GC E L+LF +M+ VR N V+ V A + +E+G +++ RI +
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
P ++ + A+ G +A+ + D+V W +++A+
Sbjct: 364 ILVATP-------LMVMYAKCGETEKAKQLFWGLQ-GRDLVAWSAIIAA 404
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 145/329 (44%), Gaps = 42/329 (12%)
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
R+ TS + F L + T N + P L S SC + N + + ++
Sbjct: 8 RRSFTSIATAASEFPSLS-SSTYTNYLHYPRLLS---------SCKHLNPLLQIHAQ--- 54
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------Q 353
+I G + + SL+ H + + + + P + IL
Sbjct: 55 --IIVSGFKHHHSITHLINLYSLF-----HKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
Q E ++ M+ +PD TF V+ AC +L+ G H I + GL DVF+
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
GL+DMY K G L ARE+F+ M DVV+W+++I G +Q EA+ FR M+ GV
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVH 529
P+ V+L+ + + +E + ++ +G + R+ S V +DL ++ G V
Sbjct: 228 PSSVSLLNLFPGICKLSNIE-------LCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVD 280
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A +QM D D V W +++A +G
Sbjct: 281 VARRVFDQMV-DQDDVSWGTMMAGYAHNG 308
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 306/580 (52%), Gaps = 64/580 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A ++S C+S + G ++H ++SS + D+ + N +L MY KCG L DAR +FD M
Sbjct: 250 TFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMM 309
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+ ++V+W MI+G QNG + A L+ +M+ + + PD TF S + S + G+
Sbjct: 310 PKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGK 369
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++H ++I++ + ++ALI +Y K + A +F DI +MI G+
Sbjct: 370 EIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGY---- 425
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
V N M N A+ +F + + + +T+ S+L AC
Sbjct: 426 ----VLNGMN--------------------NNALEIFRWLLQERMRANSVTLASVLPACA 461
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-----------LQHQA-------------- 356
+L G ++H +I+K G + V +AI L HQ
Sbjct: 462 GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNS 521
Query: 357 -----------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E LF M + TK D ++ + + ACA + +L G ++H ++M+
Sbjct: 522 MITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGA 581
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
D+F + L+DMY KCG+L A +F+ ME+ + VSW+S+I Y G +++L LF
Sbjct: 582 FRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFH 641
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M G++P+HVT + +++AC H G V+EG+ +R M E GI+ E +C+VDL RA
Sbjct: 642 GMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRA 701
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
GR++EA IN M F D VW +LL +C+ HGNV++ + A+ N+ +DP NS VLL
Sbjct: 702 GRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLS 761
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N++A++G+WE V ++ MKERGV+KVPG SWI++ H
Sbjct: 762 NVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTH 801
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 235/515 (45%), Gaps = 66/515 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +I AC L S+ LGR VHD I + D + + ++ Y + G + DAR +FD M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P ++ V W M+ G +NG + A ++++M ++ P+ TF ++ C+ + G
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH V+ S N L+AMY K + DA +F + + D+ +W MI G+ +
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F +EA LF EM + PD +T S L +
Sbjct: 329 F----------------------------MDEASCLFHEMISARMKPDSITFSSFLPLLS 360
Query: 322 SPLSLYQGMQIHSYIIKKG---------------------------FYSNVP----VCNA 350
+L QG +IH YII+ G F P VC A
Sbjct: 361 EGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTA 420
Query: 351 -----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L +F +L + + + +T V+ ACA +A+L +G +LH +I+K G
Sbjct: 421 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 480
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+V + +MDMY KCG L A + F + D D V W+S+I +Q G EEA+ LFR
Sbjct: 481 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFR 540
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M +G + + V++ L+AC+++ + G +++ M S ++D+ ++
Sbjct: 541 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKC 599
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
G + A + M + + V W S++A+ HG +
Sbjct: 600 GNLDLACRVFDTME-EKNEVSWNSIIAAYGNHGRL 633
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 256/546 (46%), Gaps = 73/546 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ C+ L GR+ H +L + + +L +L MY CG+ DA+ +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
W MI G + GQ + A+ Y +ML G +PD++TF +I+AC GL V LGR +H
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+ + ++LI Y++ I DA +F + KD W M++G+ K
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK------ 225
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
W+ A +F EM E P+ +T +L C S +
Sbjct: 226 ---------NGDWDN-------------ATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELF---RLFSL--------------- 365
+ G Q+H ++ G + PV N +L A G LF RLF +
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISG 323
Query: 366 ----------------MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
M++++ KPD ITF+ + + A+L G ++HCYI++ G++LD
Sbjct: 324 YVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLD 383
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
VF+ + L+D+Y KC + AR++F+ D+V +++I GY G AL++FR +
Sbjct: 384 VFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ 443
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+R N VTL VL AC+ + + G +L+ I++N +G + S ++D+ A+ GR+
Sbjct: 444 ERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHG--GSCYVGSAIMDMYAKCGRL 501
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTN-SAALVL 583
A ++ D D V W S++ SC +G +D+ ++ K D + SAAL
Sbjct: 502 DLAHQTFIGIS-DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSA 560
Query: 584 LCNIYA 589
N+ A
Sbjct: 561 CANLPA 566
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 162/347 (46%), Gaps = 32/347 (9%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + N AL F +L R T A ++ AC+ L +L LG+++H HIL +
Sbjct: 421 MISGYVLNGMNNNALEIFRWLLQE-RMRANSVTLASVLPACAGLAALTLGKELHGHILKN 479
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + I++MY KCG L+ A F + ++ V W +MI CSQNG+ AI+L+
Sbjct: 480 GHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLF 539
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
QM +G D + + + AC+ L + G+++HA +++ S L +++ALI MY+K
Sbjct: 540 RQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKC 599
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ A VF ++ K N SWN+IIA +
Sbjct: 600 GNLDLACRVFDTMEEK----------------------------NEVSWNSIIAAYGNHG 631
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVP-- 346
++++LF M + PD +T +++ AC + +G+ + ++ G + +
Sbjct: 632 RLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHY 691
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
C L +AG L F ++ + PD + ++GAC ++E+
Sbjct: 692 ACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVEL 738
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 177/413 (42%), Gaps = 74/413 (17%)
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
SI++ C+ + GRQ HA ++ + G + I L+ MY LDA N+F +
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 246 DITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
W MI GF+ + DFA + +M C
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKM---------------LGCGT------------ 143
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------H 354
+PD T ++ AC S+ G +H I GF +V V +++++ H
Sbjct: 144 ----LPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIH 199
Query: 355 QAGELFR----------------------------LFSLMLASQTKPDHITFNDVMGACA 386
A LF +F M ++T P+ +TF V+ CA
Sbjct: 200 DARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ + G+QLH ++ +GL +D V N L+ MY KCG L AR LF+ M D+V+W+
Sbjct: 260 SEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNG 319
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNE 505
+I GY Q G +EA LF M S+ ++P+ +T L S + +G +++ I++N
Sbjct: 320 MISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRN- 378
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
G+ +S ++D+ + V A +Q DIVV ++++ +G
Sbjct: 379 -GVSLDVFLKSALIDIYFKCRDVEMARKIFDQRT-PVDIVVCTAMISGYVLNG 429
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 303/566 (53%), Gaps = 42/566 (7%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
V F +N ++ T L + S+ SLQ ++H +L S D + +L
Sbjct: 16 VDFSAEKNIPTSKLPQKTVLKLFDS-KSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKC 74
Query: 125 YGKC--GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
Y + + A VF +P NV W +I GC +N + AI Y +M+ P++F
Sbjct: 75 YANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKF 133
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T+ ++ +ACS V GRQ+H HV+K GS + ++A I MY F R+ DA +F S
Sbjct: 134 TYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS- 192
Query: 243 ARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
D+ W +MIDG+ K L+ A+ +F +M N+ SWN +I G+A N +A LF
Sbjct: 193 GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFD 252
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
EM +R+ I S S+ G I G Y E
Sbjct: 253 EMSERDEI--------------SWSSMVDGY------ISAGRYK--------------EA 278
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+F M +T+P + V+ AC+ + +++ G +H Y+ + + LD + L+DM
Sbjct: 279 LEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KCG L E+F M++ ++ +W+++I G A G E+AL+LF +++ ++PN +TL
Sbjct: 339 YAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITL 398
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
VGVLTAC+H G V++GL++++ M+ YG+ P E C+VDLL R+G EAED IN M
Sbjct: 399 VGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP 458
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ VW +LL +C+ HGN D+ +R + +L+++P NS VLL NIYA G++++V++
Sbjct: 459 MKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSK 518
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
+ MK+RG++ VPG S +++ +H
Sbjct: 519 IRKLMKDRGIKTVPGVSIVDLNGTVH 544
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 196/479 (40%), Gaps = 122/479 (25%)
Query: 46 WDFDL--FSSLCKQNLYNEALVAFDFLQNNTNFRI-----------RPS--TYADLISAC 90
+DF L FSS+ N++ +V L+NN F+ RP+ TY L AC
Sbjct: 83 FDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKAC 142
Query: 91 SSLRSLQLGRKVHDHILSSKC------------------------------QPDAVLHNH 120
S +++Q GR++H H++ + D V N
Sbjct: 143 SVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNT 202
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN--------------------- 159
+++ Y KCG LE A+ +F +MP +N+ SW MI G ++
Sbjct: 203 MIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISW 262
Query: 160 ----------GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
G+ A+E++ QM + P +F S++ ACS + + GR +HA++ +
Sbjct: 263 SSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
+ + AL+ MY K R+ W VF + ++I +W
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTW------------------- 363
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
N +I G+A A +A+ LFS++ + + P+G+T+ +L AC + +G
Sbjct: 364 ---------NAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKG 414
Query: 330 MQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
++I + + FY P C L ++G L+ + KP+ + ++GA
Sbjct: 415 LRI--FQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA 472
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDV-----FVMNGLMDMYVKCGSLGSARELFNFMED 438
C + ++ + + K L L+ +V+ L ++Y K G ++ M+D
Sbjct: 473 CRIHGNFDLAER----VGKILLELEPQNSGRYVL--LSNIYAKVGRFDDVSKIRKLMKD 525
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 307/574 (53%), Gaps = 46/574 (8%)
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
+L+SL G+++H I+S + ++ ++ Y L DA + + + + W
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
+I+ +NG A+ Y QM G+ PD+FT+ S+++AC + G++LHA + S
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN--- 268
G +L N+L++MY K + A +F ++ +D SW +MI G++ + F
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFG 284
Query: 269 ----EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
E N+ +WNTI G N EA+ L S M + D + L AC+
Sbjct: 285 KMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIG 344
Query: 325 SLYQGMQIHSYIIKKGFYSNVP-VCNAILQ--------HQAGELFR-------------- 361
++ G +IH I+ FY V V NA++ A LF+
Sbjct: 345 AIKLGREIHGSAIRS-FYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSML 403
Query: 362 --------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK-TGL 406
LF ML S +P+++T ++ CA +A+L+ G + HCYI++ G
Sbjct: 404 SGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGF 463
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+ + N L+DMY + G + A+ LF+ + D V+++SLI GY G G EALKLF
Sbjct: 464 KDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDE 523
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ ++P+HVT+V VL+ACSH GLV EG++L+ +M + YGIIP E +C+VDL RAG
Sbjct: 524 MKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAG 583
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+H+A++ I +M + +W +LL +C+ HGN ++G+ AAE +L++ P NS VL+ N
Sbjct: 584 LLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIAN 643
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+YA++G W ++A++ M++ GVRK PG +W+++
Sbjct: 644 MYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDV 677
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 202/479 (42%), Gaps = 108/479 (22%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVH 103
W+ L SS + L+ EAL A+ + T+ IRP TY ++ AC + G+K+H
Sbjct: 162 WNL-LISSYVRNGLHGEALSAY---KQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLH 217
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
I +S + +HN +++MY K G L AR +F+ M +R+ VSW MI+G + G
Sbjct: 218 ASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWK 277
Query: 164 AAIELYVQMLQSGLMPDQFTFGSI-----------------------------------I 188
A EL+ +M G+ + T+ +I +
Sbjct: 278 EAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGL 337
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
ACS + + LGR++H I+S + +NALI MY++ + A+N+F S K+I
Sbjct: 338 GACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNII 397
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+W SM+ G++ +D + EA LF EM + P
Sbjct: 398 TWNSMLSGYTHMD----------------------------RSEEASFLFREMLLSGIEP 429
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI---------------- 351
+ +T+ S+L C +L G + H YI+++ GF + + N++
Sbjct: 430 NYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRL 489
Query: 352 --------------------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+Q + E +LF M KPDH+T V+ AC+ +
Sbjct: 490 FDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLV 549
Query: 392 EMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
G +L + G+ + ++D++ + G L A+E+ M P W++L+
Sbjct: 550 TEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLL 608
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 306/587 (52%), Gaps = 66/587 (11%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP Y L+ C L+ G+++H ++ + + ++NMY KC +E+A
Sbjct: 171 VRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAY 230
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD MP+R++V W +I+G +QNG A+EL ++M + G PD T SI+ A + +
Sbjct: 231 KMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ +GR +H + +++ S + AL+ MY+K + A +F + K + SW SMID
Sbjct: 291 SLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMID 350
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+ + AM +F +M D ++ +TV
Sbjct: 351 GY----------------------------VQNGDPGAAMEIFQKMMDEQVEMTNVTVMG 382
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------LQHQA 356
L AC + QG +H + + S+V V N++ LQH+
Sbjct: 383 ALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKT 442
Query: 357 -----------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
E F M KPD T V+ A A ++ L +H
Sbjct: 443 LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHG 502
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+++T L +VFV L+DMY KCG++ +AR+LF+ M++ V +W+++I GY G G+
Sbjct: 503 LVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKA 562
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL+LF +M+ ++PN VT + VL+ACSH GLVEEG Q + M+ +YG+ P + +V
Sbjct: 563 ALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMV 622
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DLL RA R++EA DFI +M + I V+ ++L +C+ H NV++G++AA I +DP +
Sbjct: 623 DLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGG 682
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIYA++ W++VAR+ +M+++G++K PG S +E+Q ++H
Sbjct: 683 YHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHT 729
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/567 (23%), Positives = 250/567 (44%), Gaps = 84/567 (14%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+ C+S++ L + I+ + + + +++++ K GSL +A VF +
Sbjct: 81 AILLELCTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIED 137
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ + M+ G ++N + A+ + +M G+ P + F +++ C + G+++
Sbjct: 138 KIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEI 197
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +I + S++ + ++ MY K + +A+ +F + +D+ W ++I G+++ F
Sbjct: 198 HCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFG 257
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
+T A+ L M + PD +T+ S+L A
Sbjct: 258 KT----------------------------ALELVLRMQEEGKRPDSITIVSILPAVADV 289
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------------------- 356
SL G IH Y ++ GF S V V A++ +
Sbjct: 290 GSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMI 349
Query: 357 ---------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
G +F M+ Q + ++T + ACA + +E G +H + + L
Sbjct: 350 DGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELG 409
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
DV VMN L+ MY KC + A E+F ++ +VSW+++I+GYAQ G EA+ F +M
Sbjct: 410 SDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKM 469
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGIIPTRERRSCVVDLLA 523
+ ++P+ T+V V+ A + + ++ + ++ R ++ + T +VD+ A
Sbjct: 470 QLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVAT-----ALVDMYA 524
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE--NILKIDPTNSAAL 581
+ G VH A + M + + W +++ THG +GK A E +K + +
Sbjct: 525 KCGAVHTARKLFDMMD-ERHVTTWNAMIDGYGTHG---LGKAALELFEKMKKEVIKPNEV 580
Query: 582 VLLCNIYA--SSGKWEEVARLMGSMKE 606
LC + A SG EE + GSMK+
Sbjct: 581 TFLCVLSACSHSGLVEEGFQYFGSMKK 607
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 299/530 (56%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF + + N +SW MI G + + +A+ LYV M+ GL P+ +TF + ++C+
Sbjct: 34 VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+HA ++K L +LI+MY + + DA VF + + +D+ S+ +MI G
Sbjct: 94 AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153
Query: 257 FS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ +D A+ +F+E+ ++ SWN +I+G A EA+ LF+EM ++ PD T+
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELFR---------- 361
++L CT ++ G QIHS+I GF SN+ + NA+ L + GE+ R
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273
Query: 362 ------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+F ML P+ +T ++ ACA + ++++G +
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333
Query: 398 HCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G+ + + L+DMY KCG++ +A ++F+ + + + S +++I G+A G
Sbjct: 334 HVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHG 393
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+ A L RM+ G+ P+ +T VG+L+ACSH GL + G ++++ M +Y I P E
Sbjct: 394 RADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHY 453
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL R+G EAE+ IN M + D V+W SLL +CK H N+++G+ A+ ++KI+P
Sbjct: 454 GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEP 513
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYA+S +W++VAR+ + ++G++KVPG S IEI + +H
Sbjct: 514 KNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVH 563
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 195/419 (46%), Gaps = 61/419 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ L +C+ ++ Q G+++H IL D +H +++MY + G +EDA VFD
Sbjct: 80 TFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTS 139
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G ++ G+ A+EL+
Sbjct: 140 SHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFN 199
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M++ + PD+ T +++ C+ V LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 200 EMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCG 259
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIA 283
+ A +F + KD+ SW ++I G++ ++ A VF EM E+PN + +I+
Sbjct: 260 EMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILP 319
Query: 284 GVASCS--NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
A + + ++ + + +I + SL+ ++ Q+ I+ K
Sbjct: 320 ACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSL 379
Query: 342 YSNVPVCNAI-----LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
S CNA+ + +A F L S M +PD ITF ++ AC+ ++G +
Sbjct: 380 SS----CNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRK 435
Query: 397 LHCYIMKTGLALDVFVMNGL------MDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
I K+ + LD + L +D+ + G A EL N M +PD V W SL+
Sbjct: 436 ----IFKS-MTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 176/385 (45%), Gaps = 50/385 (12%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D + FD+I W+ + S + Y EAL F+ + + + ST A ++
Sbjct: 160 MDKAQKMFDEIPIKDVVSWN-AMISGYAEIGRYKEALELFNEMMK-MDVKPDESTMATVL 217
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S C+ +++LGR++H I + + L N ++++Y KCG +E A +F+ + ++V+
Sbjct: 218 STCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVI 277
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +I G + A+ ++ +ML+ G P+ T SI+ AC+ L + +GR +H ++
Sbjct: 278 SWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 337
Query: 208 IKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
K G ++ Q +LI MY K I A VF +I K ++S +MI GF
Sbjct: 338 DKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF-------- 389
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP-- 323
A A+ A L S M + PD +T LL AC+
Sbjct: 390 --------------------AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGL 429
Query: 324 ----LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQT-KPDHITF 378
+++ M + I K + C L ++G LF+ ++ S T +PD + +
Sbjct: 430 SDLGRKIFKSMTLDYRIEPKLEHYG---CMIDLLGRSG-LFKEAEELINSMTMEPDGVIW 485
Query: 379 NDVMGACAAMASLEMGTQLHCYIMK 403
++ AC +LE+G + +MK
Sbjct: 486 GSLLKACKIHKNLELGELIAQKLMK 510
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 36/296 (12%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +VF ++ PN SWNT+I G A S+ A++L+ M L P+ T L
Sbjct: 25 FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFL 84
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHI 376
+C + +G QIH+ I+K G ++ V +++ A + H
Sbjct: 85 FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQN----------GIVEDAHK 134
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
F+ T DV ++ Y G++ A+++F+ +
Sbjct: 135 VFD------------------------TSSHRDVVSYTAMITGYASRGNMDKAQKMFDEI 170
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
DVVSW+++I GYA+ G +EAL+LF M V+P+ T+ VL+ C+H G VE G
Sbjct: 171 PIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGR 230
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
Q++ + N +G + + ++DL ++ G + A + + D++ W +L+
Sbjct: 231 QIHSWIDN-HGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY-KDVISWNTLIG 284
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 402 MKTGLALDVFVMNGLMDMYVKCG---SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+K GL + ++ L+D + L A +F +++P+ +SW+++I G+A
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSC 517
AL L+ M S G+ PN T + +C+ +EG Q++ +I++ YG+ +
Sbjct: 61 SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILK--YGLTVDLHVHTS 118
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++ + A+ G V +A + + D+V + +++ + GN+D ++ + I D +
Sbjct: 119 LISMYAQNGIVEDAHKVFDTSSH-RDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVS 177
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
A++ + YA G+++E L M + V+ P +S
Sbjct: 178 WNAMI---SGYAEIGRYKEALELFNEMMKMDVK--PDES 211
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V D+ L + + +F ++ A AFD L I
Sbjct: 356 DMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA----MHGRADAAFDLLSRMKKDGIE 411
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P T+ L+SACS LGRK+ + L + +P + ++++ G+ G ++A
Sbjct: 412 PDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEE 471
Query: 137 VFDEMP-QRNVVSWTAMIAGC 156
+ + M + + V W +++ C
Sbjct: 472 LINSMTMEPDGVIWGSLLKAC 492
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 297/530 (56%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+F+ + + N++ W M G + N A++LYV M+ GL+P+ ++F ++++C+
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G+Q+H HV+K + + +LI+MY + R+ DA VF + + + S+ ++I G
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 257 FSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ + AR +F+E+ ++ SWN +I+G N EA+ L+ +M + PD T+
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------- 353
+++ AC S+ G Q+HS+I GF SN+ + N ++
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 354 ------------HQAGELFR----LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
H L++ LF ML S P+ +T V+ ACA + ++++G +
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320
Query: 398 HCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G+ ++ L+DMY KCG + +A+++F+ M + SW+++I G+A G
Sbjct: 321 HVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG 380
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
A LF +MR +G+ P+ +T VG+L+ACSH G+++ G ++R M +Y I P E
Sbjct: 381 KANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHY 440
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL G EA++ I M + D V+W SLL +CK H NV++G+ A+N++KI+P
Sbjct: 441 GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEP 500
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYA++G+W++VA++ + ++G++K PG S IEI + +H
Sbjct: 501 ENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVH 550
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 192/419 (45%), Gaps = 55/419 (13%)
Query: 80 PSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P++Y+ L+ +C+ ++L G+++H H+L D ++ +++MY + G LEDA V
Sbjct: 63 PNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKV 122
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQEN-------------------------------AAI 166
FD R+VVS+TA+I G + G N A+
Sbjct: 123 FDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEAL 182
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
ELY M+++ + PD+ T +++ AC+ + LGRQLH+ + GS++ N LI +Y
Sbjct: 183 ELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLY 242
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWN 279
+K + A +F +A+KD+ SW ++I G + ++ A +F EM ESPN +
Sbjct: 243 SKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTML 302
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY-------QGMQI 332
+++ A + + + R G+T S L TS + +Y Q+
Sbjct: 303 SVLPACAHLGAIDIGRWIHVYINKR---LKGVTNASSL--LTSLIDMYAKCGDIEAAKQV 357
Query: 333 HSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
++ + S N + + +A F LFS M + PD ITF ++ AC+ L
Sbjct: 358 FDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGML 417
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLM-DMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++G + + + G M D+ CG A+E+ M +PD V W SL+
Sbjct: 418 DLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 476
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 153/342 (44%), Gaps = 38/342 (11%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+ EAL + + TN + ST ++SAC+ S++LGR++H I + + N
Sbjct: 178 FKEALELYKDMMK-TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVN 236
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++++Y KCG +E A +F + +++V+SW +I G + A+ L+ +ML+SG P
Sbjct: 237 VLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESP 296
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWN 237
+ T S++ AC+ L + +GR +H ++ K G S +LI MY K I A
Sbjct: 297 NDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQ 356
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF S+ + ++SW +MI GF A AN A L
Sbjct: 357 VFDSMLTRSLSSWNAMIFGF----------------------------AMHGKANAAFDL 388
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAIL 352
FS+M + PD +T LL AC+ L G I + + Y P C L
Sbjct: 389 FSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQD--YKITPKLEHYGCMIDL 446
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
G ++ +PD + + ++ AC ++E+G
Sbjct: 447 LGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELG 488
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A ++F ++ PNL WNT+ G A S++ A+ L+ M L+P+ + L
Sbjct: 12 FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHI 376
L +C +L +G QIH +++K G+ ++ V +++ A + + H
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQN----------GRLEDAHK 121
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
F + + H V L+ Y G + +AR+LF+ +
Sbjct: 122 VF-------------DRSSHRH-----------VVSYTALITGYASRGYINNARKLFDEI 157
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
DVVSW+++I GY + +EAL+L++ M + V+P+ T+V V++AC+ G +E G
Sbjct: 158 SVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGR 217
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
QL+ ++ ++G + + ++DL ++ G V A +A D++ W +L+ T
Sbjct: 218 QLHSWIE-DHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLA-KKDVISWNTLIGG-HT 274
Query: 557 HGNV 560
H N+
Sbjct: 275 HMNL 278
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/644 (31%), Positives = 316/644 (49%), Gaps = 67/644 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D A V D + + D W + + + E L FD ++ N RI
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWG-TMMAGYAHNGCFVEVLELFDKMKLG-NVRIN 328
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+ A + L+ G+++H L + D ++ ++ MY KCG E A+ +F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ R++V+W+A+IA Q G A+ L+ +M + P++ T SI+ AC+ L + L
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +H +K++ S L + AL++MY K GF
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKC--------------------------GF-- 480
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A T FN M S ++ +WN++I G A + A+ +F ++ + PD T+ ++ A
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------------- 354
C L QG IH I+K GF S+ V NA++
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 355 ------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
A E F M P+ +TF V+ A A +A+ G H I+
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ G + V N L+DMY KCG L + +LFN M+ D VSW++++ GYA G G+ A+
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M+ S V+ + V+ V VL+AC H GLVEEG +++ M ++Y I P E +C+VDLL
Sbjct: 721 LFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLL 780
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG E FI M + D VW +LL SC+ H NV +G+ A ++++K++P N A V
Sbjct: 781 GRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFV 840
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+L +IYA SG+W + + M + G++K PG SW+E++ K+HA
Sbjct: 841 VLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHA 884
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 256/567 (45%), Gaps = 69/567 (12%)
Query: 29 DQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
D A V DS +W+ + + + YNEAL + + T+ ++
Sbjct: 80 DLARSVFDSTPNPSRILWN-SMIRAYTRSKQYNEALEMY-YCMVEKGLEPDKYTFTFVLK 137
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ +LQ G H I + D + +++MY K G L+ AR VFD+MP+R+VV+
Sbjct: 138 ACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVA 197
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W AMIAG SQ+ A++ + M G+ P + ++ L + L R +H +V
Sbjct: 198 WNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVF 257
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
+ + S + N LI +Y+K + A VF + +D SWG+M
Sbjct: 258 RRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTM--------------- 300
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+AG A E + LF +M + + ++ S A + L +
Sbjct: 301 -------------MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEK 347
Query: 329 GMQIHSYIIKKGFYSNVPVCNAIL--------QHQAGELF-------------------- 360
G +IH +++ S++ V ++ +A +LF
Sbjct: 348 GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 361 --------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
LF M + KP+ +T ++ ACA ++ L++G +HC+ +K + D+
Sbjct: 408 TGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST 467
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
L+ MY KCG +A FN M D+V+W+SLI GYAQ G A+ +F ++R S +
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI 527
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
P+ T+VGV+ AC+ + +++G ++ ++ + G ++ ++D+ A+ G + AE
Sbjct: 528 NPDAGTMVGVVPACALLNDLDQGTCIHGLIV-KLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGN 559
N+ F D V W ++A+ +G+
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGH 613
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 161/626 (25%), Positives = 281/626 (44%), Gaps = 88/626 (14%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--D 85
L +A EV D +R W+ + + L + EA+ DF ++ + PS+ + +
Sbjct: 180 LKRAREVFDKMPKRDVVAWN-AMIAGLSQSEDPCEAV---DFFRSMQLVGVEPSSVSLLN 235
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L L +++L R +H ++ + + N ++++Y KCG ++ AR VFD+M ++
Sbjct: 236 LFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRVFDQMVDQD 293
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VSW M+AG + NG +EL+ +M + ++ + S A + + G+++H
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++ S ++ L+ MY K A +F WG
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLF----------WG-------------- 389
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
++ +L +W+ IIA + EA+SLF EM ++++ P+ +T+ S+L AC
Sbjct: 390 ----LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------------------- 353
L G IH + +K S++ A++
Sbjct: 446 LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLING 505
Query: 354 -HQAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
Q G+ + +F + S PD T V+ ACA + L+ GT +H I+K G D
Sbjct: 506 YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
V N L+DMY KCGSL SA LFN + D V+W+ +I Y Q G +EA+ F +MR
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMR 625
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
PN VT V VL A +++ EG+ + + + G + + ++D+ A+ G++
Sbjct: 626 LENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII-QMGFLSNTLVGNSLIDMYAKCGQL 684
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA-------AENILKIDPTNSAAL 581
+E N+M D V W ++L+ HG+ G RA E+ ++ID + ++
Sbjct: 685 XYSEKLFNEMD-HKDTVSWNAMLSGYAVHGH---GDRAIALFSLMQESQVQIDSVSFVSV 740
Query: 582 VLLCNIYASSGKWEEVARLMGSMKER 607
+ C G EE ++ SM ++
Sbjct: 741 LSACR---HXGLVEEGRKIFHSMSDK 763
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 225/498 (45%), Gaps = 58/498 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L+S+C L L ++H I+ S + + H++N+Y + AR VFD P
Sbjct: 35 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTP 90
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+ + W +MI +++ Q N A+E+Y M++ GL PD++TF +++AC+G + G
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK--- 259
H + + + L+ MY+K + A VF + ++D+ +W +MI G S+
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 260 ----LDFARTVFNEMESPNLASWNTIIAGVASCSN--------------------ANEAM 295
+DF R++ P+ S + G+ SN +N +
Sbjct: 211 PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLI 270
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ 355
L+S+ GD ++ R + + G + Y F
Sbjct: 271 DLYSKCGDVDV------ARRVFDQMVDQDDVSWGTMMAGYAHNGCFV------------- 311
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
E+ LF M + + ++ A A LE G ++H ++ + D+ V
Sbjct: 312 --EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
LM MY KCG A++LF ++ D+V+WS++I Q G EEAL LF+ M++ ++PN
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Query: 476 HVTLVGVLTACSHVGLVEEG--LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
VTL+ +L AC+ + L++ G + + + + + T + +V + A+ G A
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLST---GTALVSMYAKCGFFTAALT 486
Query: 534 FINQMAFDDDIVVWKSLL 551
N+M+ DIV W SL+
Sbjct: 487 TFNRMS-SRDIVTWNSLI 503
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 157/349 (44%), Gaps = 52/349 (14%)
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
IT ++ F K D AR+VF+ +P+ WN++I NEA+ ++ M ++ L
Sbjct: 66 ITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGL 125
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFR--- 361
PD T +L ACT L+L +G+ H I ++G +V + ++ + G+L R
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185
Query: 362 -------------------------------LFSLMLASQTKPDHITFNDVMGACAAMAS 390
F M +P ++ ++ +++
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
+E+ +H Y+ + + V NGL+D+Y KCG + AR +F+ M D D VSW +++ G
Sbjct: 246 IELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG 303
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY------RIMQN 504
YA GC E L+LF +M+ VR N V+ V A + +E+G +++ RI +
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
P ++ + A+ G +A+ + D+V W +++A+
Sbjct: 364 ILVATP-------LMVMYAKCGETEKAKQLFWGLQ-GRDLVAWSAIIAA 404
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 145/329 (44%), Gaps = 42/329 (12%)
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
R+ TS + F L + T N + P L S SC + N + + ++
Sbjct: 8 RRSFTSIATXASEFPSLS-SSTYTNYLHYPRLLS---------SCKHLNPLLQIHAQ--- 54
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------Q 353
+I G + + SL+ H + + + + P + IL
Sbjct: 55 --IIVSGFKHHHSITHLINLYSLF-----HKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
Q E ++ M+ +PD TF V+ AC +L+ G H I + GL DVF+
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
GL+DMY K G L ARE+F+ M DVV+W+++I G +Q EA+ FR M+ GV
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVH 529
P+ V+L+ + + +E + ++ +G + R+ S V +DL ++ G V
Sbjct: 228 PSSVSLLNLFPGICKLSNIE-------LCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVD 280
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A +QM D D V W +++A +G
Sbjct: 281 VARRVFDQMV-DQDDVSWGTMMAGYAHNG 308
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 309/584 (52%), Gaps = 71/584 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ + + SSLRS+ G ++H IL S + N ++ Y K ++ AR VFDEM
Sbjct: 46 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 105
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+R+V+SW ++I G NG + ++VQML SG+ D T S+ C+ + LGR
Sbjct: 106 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 165
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-- 259
+H+ +K A +++ DR + +++D +SK
Sbjct: 166 AVHSIGVK--------------ACFSREDRFCN-----------------TLLDMYSKCG 194
Query: 260 -LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
LD A+ VF EM ++ S+ ++IAG A A EA+ LF EM + + PD TV ++L
Sbjct: 195 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 254
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------------- 356
C L +G ++H +I + ++ V NA++ A
Sbjct: 255 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 314
Query: 357 --------------GELFRLFSLMLASQT-KPDHITFNDVMGACAAMASLEMGTQLHCYI 401
E LF+L+L + PD T V+ ACA++++ + G ++H YI
Sbjct: 315 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 374
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
M+ G D V N L+DMY KCG+L A LF+ + D+VSW+ +I GY G G+EA+
Sbjct: 375 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 434
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF +MR +G+ + ++ V +L ACSH GLV+EG + + IM++E I PT E +C+VD+
Sbjct: 435 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 494
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
LAR G + +A FI M D +W +LL C+ H +V + ++ AE + +++P N+
Sbjct: 495 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYY 554
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ NIYA + KWE+V RL + +RG+RK PG SWIEI+ +++
Sbjct: 555 VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 598
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
Q E+V S +R D I + K NEAL F+ L F T A ++ A
Sbjct: 298 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 357
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
C+SL + GR++H +I+ + D + N +++MY KCG+L A M+FD++ +++VSW
Sbjct: 358 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
T MIAG +G AI L+ QM Q+G+ D+ +F S++ ACS
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 460
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
LF M++S + D TF+ V + +++ S+ G QLH +I+K+G V N L+ Y+
Sbjct: 31 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 90
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
K + SAR++F+ M + DV+SW+S+I GY G E+ L +F +M SG+ + T+V
Sbjct: 91 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 150
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIP--TRERRSC--VVDLLARAGRVHEAEDFINQ 537
V C+ L+ G ++ I G+ +RE R C ++D+ ++ G + A+ +
Sbjct: 151 VFAGCADSRLISLGRAVHSI-----GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 205
Query: 538 MAFDDDIVVWKSLLASCKTHG 558
M+ D +V + S++A G
Sbjct: 206 MS-DRSVVSYTSMIAGYAREG 225
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 319/627 (50%), Gaps = 82/627 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T A ++SAC L +L GR+ H + + + N +L MY KCGS+ DA +F M
Sbjct: 143 TLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGM 202
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG--- 198
+ N VS+TAM+ G +Q G + A+ L+ +M +SG+ D + S++ AC+ C
Sbjct: 203 ARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSV 262
Query: 199 -----LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
LG+ +HA V++ GS N+LI MYTK + +A VF S+ I SW +
Sbjct: 263 ARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNIL 322
Query: 254 IDGFSK--------------------------------------LDFARTVFNEMESPNL 275
I GF + + AR +F+++ P++
Sbjct: 323 ITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSV 382
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
+WNT+++G + + LF M + + PD T+ +L +C+ L G Q+HS
Sbjct: 383 TTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSA 442
Query: 336 IIKKGFYSNVPVCNAILQ-----HQAG-------------------------------EL 359
++ ++++ V + ++ Q G E
Sbjct: 443 SVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEA 502
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
F F M + P ++ ++ +C+ ++S+ G Q+H +MK G +V+V + L+DM
Sbjct: 503 FDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDM 562
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KCG++ AR F+ M ++V+W+ +I GYAQ G G++A++LF M ++ +P+ VT
Sbjct: 563 YAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTF 622
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+ VLT CSH GLV++ + + M+N YGIIP E +C++D L RAGR E E I++M
Sbjct: 623 IAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMP 682
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
DD ++W+ LLA+C H N ++GK AAE++ +IDP N + VLL NIYAS G+ + +
Sbjct: 683 CKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASA 742
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ M RGV K G SWI+ + + A
Sbjct: 743 VRALMSNRGVVKGRGYSWIDQKDGVRA 769
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 241/501 (48%), Gaps = 62/501 (12%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIELYVQ 171
P+ +N L+ + G L+ AR + MP+RN VSW +I+ +++ G A+E+Y +
Sbjct: 72 PNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGR 131
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M GL+P FT S++ AC GL +G GR+ H +K ++ +NAL+ MYTK
Sbjct: 132 MRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGS 191
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ DA +F +AR PN S+ ++ G+A +
Sbjct: 192 VGDAVRLFYGMAR----------------------------PNEVSFTAMMGGLAQTGSI 223
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL--------SLYQGMQIHSYIIKKGFYS 343
++A+ LF+ M + D ++V S+L AC + G IH+ +++KGF S
Sbjct: 224 DDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGS 283
Query: 344 NVPVCNAILQH-----QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+ V N+++ + E ++F + + +++N ++ S ++
Sbjct: 284 DQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTI----VSWNILITGFGQEGSCAKAVEVL 339
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+ + G + + L+ +K + SAR +F+ + P V +W++L+ GY Q +
Sbjct: 340 SLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQ 399
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-----IMQNEYGIIPTRE 513
+ ++LFRRM+ V+P+ TL +L++CS +G+++ G Q++ ++ N+ +
Sbjct: 400 DTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVA---- 455
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAEN 569
S +VD+ ++ G++ A N+M + D+V W S+++ H D K+ EN
Sbjct: 456 --SGLVDMYSKCGQIGIARSIFNKMT-ERDVVCWNSIISGLTIHSLNKEAFDFFKQMREN 512
Query: 570 ILKIDPTNSAALVLLCNIYAS 590
+ ++ A+++ C+ +S
Sbjct: 513 GIMPTESSYASMINSCSRLSS 533
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 48/315 (15%)
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLA 276
N L+ +Y++ A F ++ + S+ + + + LD AR + M N
Sbjct: 47 NRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAV 106
Query: 277 SWNTIIAGVA-SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWNT+I+ +A S + EA+ ++ M L+P T+ S+L AC +L G + H
Sbjct: 107 SWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGV 166
Query: 336 IIKKGFYSNVPVCNAILQ---------------------------------HQAGEL--- 359
+K G +N V NA+L Q G +
Sbjct: 167 AVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDA 226
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACA--------AMASLEMGTQLHCYIMKTGLALDVF 411
RLF+ M S D ++ + V+GACA + +G +H +++ G D
Sbjct: 227 LRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQH 286
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+DMY KC + A ++F + +VSW+ LI G+ Q G +A+++ M+ +G
Sbjct: 287 VGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAG 346
Query: 472 VRPNHVTLVGVLTAC 486
PN VT +L +C
Sbjct: 347 FEPNEVTYSNLLASC 361
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 75/355 (21%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C+ +D+A +V +S W+ L + ++ +A+ +Q F
Sbjct: 293 DMYTKCVEMDEAVKVFESLPSVTIVSWNI-LITGFGQEGSCAKAVEVLSLMQE-AGFEPN 350
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHI-----------LSSKC----------------- 111
TY++L+++C R + R + D I LS C
Sbjct: 351 EVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQH 410
Query: 112 ---QPDA-----------------------------VLHNH------ILNMYGKCGSLED 133
QPD +LHN +++MY KCG +
Sbjct: 411 QNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGI 470
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
AR +F++M +R+VV W ++I+G + + A + + QM ++G+MP + ++ S+I +CS
Sbjct: 471 ARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSR 530
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L + GRQ+HA V+K + ++ +ALI MY K + DA F ++ K+I +W M
Sbjct: 531 LSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEM 590
Query: 254 IDGFSK---LDFARTVFNEM----ESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
I G+++ D A +F M + P+ ++ ++ G + ++AM+ F+ M
Sbjct: 591 IHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSM 645
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 297/546 (54%), Gaps = 46/546 (8%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
+Y L D+ +F+ + ++W ++I + +G + ++ ++ ML SGL PD
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI-------LDAW 236
F S++++C+ L + LG LH ++I+ L + NAL+ MY+K + L A
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF + + T + S+ D R +F M +L SWNTIIAG A E +
Sbjct: 169 EVFDEMTER--TRSVRTVSVLSE-DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
+ EMG L PD T+ S+L + + +G +IH I++G +++ V ++++ A
Sbjct: 226 MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYA 285
Query: 357 G------------------------------------ELFRLFSLMLASQTKPDHITFND 380
E R F ML ++ KP +F+
Sbjct: 286 KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
+M ACA + +L +G QLH YI + G ++F+ + L+DMY KCG++ +A+++F+ M D
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+VSW+++I+G A G +A++LF +M + G++PNHV + VLTACSH GLV+E + +
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFN 465
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
M ++GI P E + V DLL RAGR+ EA DFI M +W +LL++C+ H N+
Sbjct: 466 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNI 525
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
D+ ++ A IL++DP N+ A +LL NIY+++ +W+E A+ SM+ G+RK P SWIE+
Sbjct: 526 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 585
Query: 621 QTKIHA 626
+ K++A
Sbjct: 586 KNKVYA 591
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 36 DSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
DS + F+ + + DL S + LY E L + N + T + ++
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREM-GGANLKPDSFTLSSVLPL 248
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
+ + G+++H + D + + +++MY KC + D+ VF + +R+ +SW
Sbjct: 249 IAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISW 308
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
++IAGC QNG + + + QML + + P ++F SI+ AC+ L + LG+QLH ++ +
Sbjct: 309 NSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 368
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG---FSKLDFARTV 266
+ ++ ++L+ MY K I A +F + +D+ SW +MI G + A +
Sbjct: 369 NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIEL 428
Query: 267 FNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEM 301
F +ME+ PN ++ ++ + +EA F+ M
Sbjct: 429 FEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSM 467
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 302/566 (53%), Gaps = 42/566 (7%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
V F +N ++ T L + S+ SLQ ++H +L S D + +L
Sbjct: 16 VDFSAEKNIPTSKLPQKTVLKLFDS-KSITSLQYLTQLHALVLRSGHFQDHYVSGALLKC 74
Query: 125 YGKC--GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
Y + + A VF +P NV W +I GC +N + AI Y +M+ P++F
Sbjct: 75 YANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKF 133
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T+ ++ +ACS V GRQ+H HV+K GS + ++A I MY F R+ DA +F S
Sbjct: 134 TYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS- 192
Query: 243 ARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
D+ W +MIDG+ K L+ A+ +F +M N+ SWN +I G+A N +A LF
Sbjct: 193 GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFD 252
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
EM +R+ I S S+ G I G Y E
Sbjct: 253 EMSERDEI--------------SWSSMVDGY------ISAGRYK--------------EA 278
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+F M +T+P + V+ AC+ + +++ G +H Y+ + + LD + L+DM
Sbjct: 279 LEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KCG L E+F M++ ++ +W+++I G A G E+AL+LF +++ ++PN +TL
Sbjct: 339 YAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITL 398
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
VGVLTAC+H G V++GL++++ M+ YG+ P E C+VDLL R+G EAED IN M
Sbjct: 399 VGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP 458
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ VW +LL +C+ HGN D+ +R + +L+++P NS VLL NIYA G++++V++
Sbjct: 459 MKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSK 518
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
+ MK RG++ VPG S +++ +H
Sbjct: 519 IRKLMKNRGIKTVPGVSIVDLNGTVH 544
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 178/433 (41%), Gaps = 111/433 (25%)
Query: 46 WDFDL--FSSLCKQNLYNEALVAFDFLQNNTNFRI-----------RPS--TYADLISAC 90
+DF L FSS+ N++ +V L+NN F+ RP+ TY L AC
Sbjct: 83 FDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKAC 142
Query: 91 SSLRSLQLGRKVHDHILSSKC------------------------------QPDAVLHNH 120
S +++Q GR++H H++ + D V N
Sbjct: 143 SVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNT 202
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN--------------------- 159
+++ Y KCG LE A+ +F +MP +N+ SW MI G ++
Sbjct: 203 MIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISW 262
Query: 160 ----------GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
G+ A+E++ QM + P +F S++ ACS + + GR +HA++ +
Sbjct: 263 SSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
+ + AL+ MY K R+ W VF + ++I +W
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTW------------------- 363
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
N +I G+A A +A+ LFS++ + + P+G+T+ +L AC + +G
Sbjct: 364 ---------NAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKG 414
Query: 330 MQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
++I + + FY P C L ++G L+ + KP+ + ++GA
Sbjct: 415 LRI--FQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA 472
Query: 385 CAAMASLEMGTQL 397
C + ++ ++
Sbjct: 473 CRIHGNFDLAERV 485
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 328/608 (53%), Gaps = 43/608 (7%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP----STYADLIS--------------- 88
DLF + ++N+ V + +N RP + +AD++
Sbjct: 68 LDLFDRMPRKNVVAWTSVMSGYTRNG-----RPEAALAMFADMVESGVAPNDFACNAALV 122
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ L +L+ G +VH + + DA + + ++ MY +CGSL A+ VFD M +VV
Sbjct: 123 ACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVG 182
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
+T++I+ +NG+ A E +QML+ GL P++ T +I+ AC + LG+Q+H ++I
Sbjct: 183 YTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLI 238
Query: 209 KS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFA 263
K + S ALI Y++ A VF S+ K++ SW SM+ + +L+ A
Sbjct: 239 KKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEA 298
Query: 264 RTVFNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
VF +M S PN + + ++ +C + L +LI D + V + L +
Sbjct: 299 LQVFGDMISEGVDPNEFALSIVLG---ACGSIGLGRQLHCSAIKHDLITD-IRVSNALLS 354
Query: 320 CTSPLSLYQGMQ-IHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHIT 377
L + ++ + + I S +A Q+ GE L M + P+
Sbjct: 355 MYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYA 414
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F+ V+ +CA +ASL+ G Q HC +K G ++ N L++MY KCG +GSAR F+ M
Sbjct: 415 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 474
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DV SW+SLI G+AQ G +AL++F +MRS+G++P+ T +GVL C+H G+VEEG
Sbjct: 475 THDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGEL 534
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+R+M ++Y P +C++D+L R GR EA IN M F+ D ++WK+LLASCK H
Sbjct: 535 FFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N+D+GK AA+ ++++ +SA+ VL+ NIYA G+WE+ ++ M E GV+K G SW
Sbjct: 595 RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 654
Query: 618 IEIQTKIH 625
IEI ++H
Sbjct: 655 IEINNEVH 662
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 244/535 (45%), Gaps = 87/535 (16%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
PD VL LN K G L DA +FD MP++NVV+WT++++G ++NG+ AA+ ++ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
++SG+ P+ F + + AC+ L + G Q+H+ +++ + LI MY++ +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
A VF + M+SP++ + ++I+
Sbjct: 166 PAAKEVF----------------------------DRMDSPDVVGYTSLISAFCRNGEFE 197
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK------------- 339
A +M + L P+ T+ ++L AC L G QIH Y+IKK
Sbjct: 198 LAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTA 253
Query: 340 --GFYSN-------------------VPVCNA----ILQHQAGELFRLFSLMLASQTKPD 374
FYS V C+ I + E ++F M++ P+
Sbjct: 254 LIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPN 313
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+ V+GAC S+ +G QLHC +K L D+ V N L+ MY + G + + N
Sbjct: 314 EFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLN 370
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+E+PD+VSW++ I Q G GE+A+ L +M S G PN VL++C+ V +++
Sbjct: 371 KIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQ 430
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD----DDIVVWKSL 550
G+Q + + + G + ++++ ++ G++ A ++AFD D+ W SL
Sbjct: 431 GMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSA-----RLAFDVMHTHDVTSWNSL 484
Query: 551 LASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ HG+ ++V + N +K D + +++ CN + E RLM
Sbjct: 485 IHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLM 539
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 284/547 (51%), Gaps = 62/547 (11%)
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+VL ++ Y G + +AR +FDEMP+R+VV+WT MIAG + A ++ +M+
Sbjct: 43 SVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMN 102
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
L P+ FT S+++AC G+ C+ GR +H IK + NAL+ MY
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYA------- 155
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
T SM D A VF + N SW T+IAG +
Sbjct: 156 -------------TCCVSMDD-------ACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGG 195
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-- 352
+ +F +M E+ + + + ACTS S G Q+H+ + K GF SN+PV N+IL
Sbjct: 196 LRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDM 255
Query: 353 ---------------------------------QHQAGELFRLFSLMLASQTKPDHITFN 379
+ E +FS+M + P+ TF
Sbjct: 256 YCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFT 315
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+M ACA +A L G Q+H I++ GL ++ + N L+DMY KCG++ + ++F M
Sbjct: 316 SIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRR 375
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D+VSW+++++GY G GEEA++LF +M SG+RP+ V + +L+ACSH GLV+EGL+ +
Sbjct: 376 DLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYF 435
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
++M +Y I P +E CVVDLL RAG+V EA + I M F D VW L +CK H
Sbjct: 436 KLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTF 495
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
++GK AA IL + P + V+L NIYA+ GKW E ARL MK G +K G+SW+E
Sbjct: 496 PNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVE 555
Query: 620 IQTKIHA 626
+ +++
Sbjct: 556 VGNHVYS 562
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 40/325 (12%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ P +++ + AC+S+ S G ++H + + + + N IL+MY +C +A
Sbjct: 208 ELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANR 267
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV-QMLQS-GLMPDQFTFGSIIRACSGL 194
F EM QR++++W +IAG ++ N LYV M++S G P+ FTF SI+ AC+ L
Sbjct: 268 YFYEMNQRDLITWNTLIAGYERS---NPTESLYVFSMMESEGFSPNCFTFTSIMAACATL 324
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+Q+H +I+ +L NALI MY+K I D+ VF ++R+D+ SW +M+
Sbjct: 325 AFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMM 384
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
G+ + EA+ LF +M + PD +
Sbjct: 385 IGYGTHGYGE----------------------------EAVELFDKMVRSGIRPDRVVFM 416
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLAS 369
++L AC+ + +G++ ++ G Y+ P C L +AG++ + L+ +
Sbjct: 417 AILSACSHAGLVDEGLRYFKLMV--GDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESM 474
Query: 370 QTKPDHITFNDVMGACAAMASLEMG 394
KPD + +GAC A +G
Sbjct: 475 PFKPDECVWGPFLGACKAHTFPNLG 499
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 169/406 (41%), Gaps = 68/406 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-SLEDARMVFDE 140
T + ++ AC ++ L GR VH + + N +++MY C S++DA MVF
Sbjct: 111 TISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRG 170
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ +N VSWT +IAG + + ++ QML + + F+F +RAC+ + G
Sbjct: 171 IHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFG 230
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
QLHA V K S+L N+++ MY + +A F + ++D+ +W ++I G+ +
Sbjct: 231 EQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYER- 289
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
SN E++ +FS M P+ T S++ AC
Sbjct: 290 ----------------------------SNPTESLYVFSMMESEGFSPNCFTFTSIMAAC 321
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------QHQ-------------- 355
+ L G QIH II++G N+ + NA++ HQ
Sbjct: 322 ATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWT 381
Query: 356 -----------AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMK 403
E LF M+ S +PD + F ++ AC+ ++ G + +
Sbjct: 382 AMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGD 441
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++ D + ++D+ + G + A EL M PD W +
Sbjct: 442 YNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFL 487
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
E+L F +++ F T+ +++AC++L L G+++H I+ + L N
Sbjct: 293 TESLYVFSMMESE-GFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNA 351
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++MY KCG++ D+ VF M +R++VSWTAM+ G +G A+EL+ +M++SG+ PD
Sbjct: 352 LIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPD 411
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA-----LIAMYTKFDRILDA 235
+ F +I+ ACS V G + ++ G + IS + ++ + + ++ +A
Sbjct: 412 RVVFMAILSACSHAGLVDEGLRYFKLMV----GDYNISPDQEIYGCVVDLLGRAGKVEEA 467
Query: 236 WNVFSSIARK-DITSWGSMI 254
+ + S+ K D WG +
Sbjct: 468 YELIESMPFKPDECVWGPFL 487
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 203/624 (32%), Positives = 311/624 (49%), Gaps = 84/624 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A + SAC SL GR+ H ++ + + + N +L MY KCG DA VF ++
Sbjct: 140 TFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDI 199
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS--------- 192
P+ N V++T M+ G +Q Q A EL+ ML+ G+ D + S++ C+
Sbjct: 200 PEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPC 259
Query: 193 -GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
G+ G+Q+H +K L N+L+ MY K + A VF ++ R + SW
Sbjct: 260 HGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWN 319
Query: 252 SMI---------------------DGFSKLDF-----------------ARTVFNEMESP 273
MI DG+ D R +F+ M P
Sbjct: 320 IMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCP 379
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+L SWN I++G ++ EA+ LF +M + PD T+ +L +C L G ++H
Sbjct: 380 SLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVH 439
Query: 334 SYIIKKGFYSNVPVCNAIL------------QHQAGELFRL-----------FSLMLASQ 370
+ K GFY +V V ++++ +H +L L FS+ Q
Sbjct: 440 AASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQ 499
Query: 371 TK-------------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
P +F V+ +CA ++SL G Q H I+K G D+FV + L+
Sbjct: 500 DALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLI 559
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
+MY KCG + AR F+ M + V+W+ +I GYAQ G G AL L+ M SSG +P+ +
Sbjct: 560 EMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDI 619
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T V VLTACSH LV+EGL+++ M +YG++P +C++D L+RAGR +E E ++
Sbjct: 620 TYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDA 679
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M DD VVW+ +L+SC+ H N+ + KRAAE + ++DP NSA+ VLL N+Y+S GKW++
Sbjct: 680 MPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYVLLANMYSSLGKWDDA 739
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQ 621
+ M VRK PG S + Q
Sbjct: 740 HVVRDLMSHNQVRKDPGYSRNDTQ 763
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 203/465 (43%), Gaps = 62/465 (13%)
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +HA + + S N I +Y+K D I A +VF +I K+I SW +++ + K
Sbjct: 25 GKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAILAAYCK 84
Query: 260 ---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
L +A +F +M N S NT+I+ + C +A+ + + +IP +T ++
Sbjct: 85 ARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHITFATV 144
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------ 352
AC S L G + H +IK G SN+ V NA+L
Sbjct: 145 FSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNE 204
Query: 353 ------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACA----------AMAS 390
+Q E LF LML + D ++ + ++G CA +++
Sbjct: 205 VTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGIST 264
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
G Q+H +K G D+ + N L+DMY K G + SA ++F + VVSW+ +I G
Sbjct: 265 NAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAG 324
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y E+A + +RM+S G P+ VT + +LTAC G V G Q++ M P
Sbjct: 325 YGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMP-----CP 379
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFD---DDIVVWKSLLASCKTHGNVDVGKR-- 565
+ + ++ + EA + +M F D +L+SC G ++ GK
Sbjct: 380 SLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVH 439
Query: 566 -AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
A++ D A+ ++ N+Y+ GK E + + E V
Sbjct: 440 AASQKFGFYDDVYVASSLI--NVYSKCGKMELSKHVFSKLPELDV 482
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 226/512 (44%), Gaps = 74/512 (14%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD---- 139
A+L+ C + ++ G+ VH + D L NH + +Y KC + A VFD
Sbjct: 10 ANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPH 69
Query: 140 ---------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
+MPQRN VS +I+ + G E A++ Y +
Sbjct: 70 KNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSV 129
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
+ G++P TF ++ AC L GR+ H VIK S++ NAL+ MY K
Sbjct: 130 MLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLN 189
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
DA VF I PN ++ T++ G+A +
Sbjct: 190 ADALRVFRDIPE----------------------------PNEVTFTTMMGGLAQTNQIK 221
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLL--CA--------CTSPLSLYQGMQIHSYIIKKGFY 342
EA LF M + + D +++ S+L CA C + QG Q+H+ +K GF
Sbjct: 222 EAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFE 281
Query: 343 SNVPVCNAILQHQA--GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
++ +CN++L A G++ + + + +++N ++ + E +
Sbjct: 282 RDLHLCNSLLDMYAKIGDMDSA-EKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQR 340
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ G D ++ VK G + + R++F+ M P + SW++++ GY Q EA
Sbjct: 341 MQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREA 400
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
++LFR+M+ P+ TL +L++C+ +G +E G +++ Q ++G S +++
Sbjct: 401 VELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQ-KFGFYDDVYVASSLIN 459
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ ++ G++ ++ +++ + D+V W S+LA
Sbjct: 460 VYSKCGKMELSKHVFSKLP-ELDVVCWNSMLA 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 160/342 (46%), Gaps = 36/342 (10%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+ EA+ F +Q R +T A ++S+C+ L L+ G++VH D + +
Sbjct: 397 HREAVELFRKMQFQCQHPDR-TTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVAS 455
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++N+Y KCG +E ++ VF ++P+ +VV W +M+AG S N A+ + +M Q G P
Sbjct: 456 SLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFP 515
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+F+F +++ +C+ L + G+Q HA ++K + ++LI MY K + A F
Sbjct: 516 SEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFF 575
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ ++ +W MI G+ A + + A+ L++
Sbjct: 576 DVMPGRNTVTWNEMIHGY----------------------------AQNGDGHNALCLYN 607
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQH 354
+M PD +T ++L AC+ + +G++I + +++K Y VP C
Sbjct: 608 DMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQK--YGVVPKVAHYTCIIDCLS 665
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+AG + ++ A K D + + V+ +C A+L + +
Sbjct: 666 RAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKR 707
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/645 (29%), Positives = 330/645 (51%), Gaps = 70/645 (10%)
Query: 23 ELCMLLDQAGEVVDSFLRRFDDIWD-FD-LFSSLCKQNLYNEAL-VAFDFLQNNTNFRIR 79
+L L + G + ++ R F+ I D D L+ ++ K N +L A FL ++
Sbjct: 86 KLVSLFSKYGSINEA-ARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 80 PSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P Y L+ C L+ G+++H ++++ + ++NMY KC ++DA +
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD MP+R++VSW +IAG SQNG A+EL ++M G PD T +++ A + + +
Sbjct: 205 FDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
+G+ +H + I++ + AL MY+K +
Sbjct: 265 MVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSV------------------------- 299
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+ AR +F+ M+ + SWN+++ G +A+++F +M + + P G+T+ L
Sbjct: 300 ---ETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEAL 356
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
AC L +G +H ++ + S++ V N+++
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416
Query: 353 -----------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ E FS M + KPD T V+ A A ++ +H I
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+++ L ++FV L+DMY KCG++ AR+LF+ + D V++W+++I GY G G AL
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF +M+ V PN +T + V++ACSH GLV+EGL+ ++ M+ +YG+ P+ + +VDL
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAGR+ EA DFI M I V+ + +CK H N++VG++AA+ + +++P
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYH 656
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIYAS+ KW +VA + +M+++G++K PG S +E++ ++H+
Sbjct: 657 VLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHS 701
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/567 (23%), Positives = 251/567 (44%), Gaps = 84/567 (14%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+ C+S++ L ++ ++ + + + +++++ K GS+ +A VF+ +
Sbjct: 53 AVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ + M+ G ++N A+ +M + P + F +++ C + G+++
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +I + +++ + ++ MY K +I DA+ +F + +D+ SW ++I GFS+ FA
Sbjct: 170 HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFA 229
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
+ +A+ L M D PD +T+ ++L A
Sbjct: 230 K----------------------------KALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------------------- 354
L G IH Y I+ GF V + A+
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 355 ----QAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
Q GE + +F ML P +T + + ACA + LE G +H ++ + L
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG 381
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D+ VMN L+ MY KC + A ++FN + VSW+++I+GYAQ G EAL F M
Sbjct: 382 SDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVDLLAR 524
+S G++P+ T+V V+ A + + + ++ ++ + I T + +VD+ ++
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT----TALVDMYSK 497
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK-----IDPTNSA 579
G +H A + M D ++ W +++ THG +G+ A + K ++P +
Sbjct: 498 CGAIHMARKLFD-MISDRHVITWNAMIDGYGTHG---LGRAALDLFDKMKKGAVEPNDIT 553
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKE 606
L ++ + SG +E R SMK+
Sbjct: 554 YLSVISAC-SHSGLVDEGLRHFKSMKQ 579
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 313/580 (53%), Gaps = 57/580 (9%)
Query: 102 VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQ 161
+H ++ + C + NH+LN+Y K +LE A +F+E+PQ +V SWT +I+G ++ G
Sbjct: 310 LHAKLIKNGCV--GIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSG-LCCVGLGRQLHAHVIKSEHGSHLISQN 220
+ L+ +M G+ P+QFT ++++CS + +G+ +H ++++ + N
Sbjct: 368 SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL-DFARTV--FNEMESPNLAS 277
+++ Y K A +F +A KD SW M+ + ++ D ++V F ++ + AS
Sbjct: 428 SILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAAS 487
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
WNT+I G+ A+ L +M + LT L +S L G QIH+ ++
Sbjct: 488 WNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVL 547
Query: 338 KKGFYSNVPVCNAILQH--QAGEL------------------------------------ 359
K G + V N+++ + GE+
Sbjct: 548 KVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSM 607
Query: 360 -------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ FS M+ SQ + D T V+ ACA+ LE+G Q+H YI K G
Sbjct: 608 VSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGH 667
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
LDVF+ + ++DMYVKCGSL A +FN +D +VV W+S+I G A G G EA++LF
Sbjct: 668 GLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFEL 727
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M + G+ PN V+ VGVLTACSH GL+EEG + +R+M+ YGI P E +C+VDL RAG
Sbjct: 728 MINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAG 787
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R++E ++FI+ A VW+S L+SC+ H N+++G + +L+++P ++ +L +
Sbjct: 788 RLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSS 847
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
I A+ +WEE A++ M++RGV+K P QSWI+++ ++H+
Sbjct: 848 ICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHS 887
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 54/350 (15%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ + SSL L LG+++H +L D + N +++MY KCG +E A ++F +
Sbjct: 522 TFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHL 581
Query: 142 PQRNV---------------VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
PQ + VSW++M++G QNG+ A++ + M+ S + D+FT S
Sbjct: 582 PQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTS 641
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++ AC+ + LGRQ+H ++ K HG + +++I MY K + DAW +F+ ++
Sbjct: 642 VVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRN 701
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
+ W SM I+G A EA+ LF M + +
Sbjct: 702 VVLWTSM----------------------------ISGCALHGQGREAVRLFELMINEGI 733
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFR 361
P+ ++ +L AC+ L +G + + + + Y P C L +AG L
Sbjct: 734 TPNEVSFVGVLTACSHAGLLEEGCKY--FRLMREVYGIRPGAEHFTCMVDLYGRAGRLNE 791
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
+ + + + + +C ++EMG ++ K L L+ F
Sbjct: 792 IKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGI----WVCKKLLELEPF 837
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 199/472 (42%), Gaps = 93/472 (19%)
Query: 40 RRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACS 91
+ F++I D+FS + L + L F +Q+ + P+ T + ++ +CS
Sbjct: 342 KMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQG---VCPNQFTLSIVLKSCS 398
Query: 92 S-LRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC---------------------- 128
S + ++G+ +H IL + DAVL+N IL+ Y KC
Sbjct: 399 SNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWN 458
Query: 129 ---------GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
G ++ + +F ++P ++ SW MI G +NG E A+EL +M+ +G
Sbjct: 459 IMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAF 518
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
++ TF + S L +GLG+Q+H V+K +N+LI MY K + A +F
Sbjct: 519 NKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIF 578
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ ++ SM++ D A +ES SW+++++G +A+ FS
Sbjct: 579 KHLPQES-----SMMNSEESCDDA-----VVES---VSWSSMVSGYVQNGRFEDALKTFS 625
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------- 351
M ++ D T+ S++ AC S L G Q+H YI K G +V + ++I
Sbjct: 626 FMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCG 685
Query: 352 ----------------------------LQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
L Q E RLF LM+ P+ ++F V+
Sbjct: 686 SLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLT 745
Query: 384 ACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFN 434
AC+ LE G + + + G+ ++D+Y + G L +E +
Sbjct: 746 ACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIH 797
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/638 (31%), Positives = 317/638 (49%), Gaps = 67/638 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFD-DIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
C L D A V D+ + +W+ L + K +Y EAL F+ L + + TY
Sbjct: 51 CHLYDHAKCVFDNMENPCEISLWN-GLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTY 109
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++ AC L LG+ +H ++ + D V+ + ++ MY KC + E A +F+EMP+
Sbjct: 110 PSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPE 169
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++V W +I+ Q+G A+E + M + G P+ T + I +C+ L + G ++
Sbjct: 170 KDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEI 229
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +I S +AL+ MY K L+ A
Sbjct: 230 HEELINSGFLLDSFISSALVDMYGKCGH----------------------------LEMA 261
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VF +M + +WN++I+G ++ + LF M + + P T+ SL+ C+
Sbjct: 262 IEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRS 321
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------------------- 354
L +G +H Y I+ S+V + ++++
Sbjct: 322 ARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMI 381
Query: 355 ----QAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
G+LF LFS M S +PD ITF V+ AC+ +A+LE G ++H I++ L
Sbjct: 382 SGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLD 441
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+ VM L+DMY KCG++ A +F + D+VSW+S+I Y G AL+LF M
Sbjct: 442 NNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEM 501
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
S ++P+ VT + +L+AC H GLV+EG + M N YGIIP E SC++DLL RAGR
Sbjct: 502 LQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGR 561
Query: 528 VHEAEDFINQMA-FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+HEA + + Q DD+ + +L ++C+ H N+D+G A ++ DP +S+ +LL N
Sbjct: 562 LHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSN 621
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
+YAS+ KW+EV + MKE G++K PG SWIEI KI
Sbjct: 622 MYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKI 659
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 239/516 (46%), Gaps = 68/516 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+ AC + +SL+ G+ +H +++ Q D L +++N+Y C + A+ VFD M
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 146 VVS-WTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQL 203
+S W ++AG ++N A+EL+ ++L L PD +T+ S+++AC GL LG+ +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H ++K+ ++ ++L+ MY K + A +F+ + KD+
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDV---------------- 172
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
A WNT+I+ N EA+ F M P+ +T+ + + +C
Sbjct: 173 ------------ACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARL 220
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF--------------- 360
L L +GM+IH +I GF + + +A++ A E+F
Sbjct: 221 LDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMI 280
Query: 361 -------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+LF M KP T + ++ C+ A L G +H Y ++ +
Sbjct: 281 SGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQ 340
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
DVF+ + LMD+Y KCG + A +F + VVSW+ +I GY G EAL LF M
Sbjct: 341 SDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEM 400
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
R S V P+ +T VLTACS + +E+G +++ ++ E + ++D+ A+ G
Sbjct: 401 RKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLII-EKKLDNNEVVMGALLDMYAKCGA 459
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
V EA + D+V W S++ + +HG V
Sbjct: 460 VDEAFSVFKCLP-KRDLVSWTSMITAYGSHGQAYVA 494
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 305/581 (52%), Gaps = 66/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +++ + SL LG++VH L + N ++NMY K AR VFD M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC-CVGLG 200
+R+++SW ++IAG +QNG E A+ L++Q+L+ GL PDQ+T S+++A S L + L
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H H IK + S ALI Y++ +R + +
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEIL--------------------- 474
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
F R F+ L +WN ++AG + ++ + LF+ M + D T+ ++ C
Sbjct: 475 -FERHNFD------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 321 TSPLSLYQGMQIHSYIIKKGF--------------------------YSNVPVCN----- 349
++ QG Q+H+Y IK G+ + ++PV +
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 350 -----AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
I + F +FS M PD T + A + + +LE G Q+H +K
Sbjct: 588 TMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL 647
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
D FV L+DMY KCGS+ A LF +E ++ +W++++VG AQ G G+E L+LF
Sbjct: 648 NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLF 707
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
++M+S G++P+ VT +GVL+ACSH GLV E + R M +YGI P E SC+ D L R
Sbjct: 708 KQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGR 767
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG V +AE+ I M+ + ++++LLA+C+ G+ + GKR A +L+++P +S+A VLL
Sbjct: 768 AGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLL 827
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+YA++ KW+E+ MK V+K PG SWIE++ KIH
Sbjct: 828 SNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 153/609 (25%), Positives = 263/609 (43%), Gaps = 95/609 (15%)
Query: 40 RRFDDIWDFDLFS-----------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
R FD + D DL S S C +A + F L+ + + R T + ++
Sbjct: 95 RVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSR-MTLSPMLK 153
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
C + H + D + ++N+Y K G +++ +++F+EMP R+VV
Sbjct: 154 LCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVL 213
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA------------------ 190
W M+ + G + AI+L SGL P++ T + R
Sbjct: 214 WNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGND 273
Query: 191 CSGLCCV-----GLGRQLH-----------AHVIKSEHGSHLISQNALIAMYTKFDRILD 234
S + + GL LH A +++S+ ++ ++A K D +
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 235 AWNVFSSIARKD----ITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVAS 287
V + +T S+I+ + KL FARTVF+ M +L SWN++IAG+A
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS-PLSLYQGMQIHSYIIKKGFYSNVP 346
EA+ LF ++ L PD T+ S+L A +S P L Q+H + IK S+
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 347 VCNAIL-----------------------------------QHQAGELFRLFSLMLASQT 371
V A++ H + +LF+LM
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+ D T V C + ++ G Q+H Y +K+G LD++V +G++DMYVKCG + +A+
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
F+ + PD V+W+++I G + G E A +F +MR GV P+ T+ + A S +
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 492 VEEGLQLYRIMQNEYGIIPTRER--RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
+E+G Q++ N + T + + +VD+ A+ G + +A ++ +I W +
Sbjct: 634 LEQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNA 689
Query: 550 LLASCKTHG 558
+L HG
Sbjct: 690 MLVGLAQHG 698
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 219/472 (46%), Gaps = 51/472 (10%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L LG+ H IL+ + P+ L N++++MY KCGSL AR VFD+MP R++VSW +++A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 156 CSQNGQ---EN--AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
+Q+ + EN A L+ + Q + + T +++ C V H + K
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
AL+ +Y KF ++ + +F + +D+ W M+ + ++ F
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE------ 228
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
EA+ L S L P+ +T+R LL + S
Sbjct: 229 ----------------------EAIDLSSAFHSSGLNPNEITLR-LLARISGDDS--DAG 263
Query: 331 QIHSYI-------IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
Q+ S+ + + + N + + Q L + F+ M+ S + D +TF ++
Sbjct: 264 QVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLA 323
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+ SL +G Q+HC +K GL L + V N L++MY K G AR +F+ M + D++S
Sbjct: 324 TAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS 383
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR--- 500
W+S+I G AQ G EA+ LF ++ G++P+ T+ VL A S + EGL L +
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVH 440
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ + + + ++D +R + EAE + F D+V W +++A
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 149/348 (42%), Gaps = 68/348 (19%)
Query: 78 IRPSTYA--DLISACSSL-RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
++P Y ++ A SSL L L ++VH H + D+ + +++ Y + +++A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
++F E ++V+W AM+AG +Q+ + ++L+ M + G D FT ++ + C L
Sbjct: 472 EILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+Q+HA+ IKS + L + ++ MY K + A F SI D +W
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW---- 586
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
T+I+G A +FS+M ++PD T+
Sbjct: 587 ------------------------TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKG-------------FYS------------------ 343
+L A + +L QG QIH+ +K Y+
Sbjct: 623 TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 344 NVPVCNAIL----QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACA 386
N+ NA+L QH G E +LF M + KPD +TF V+ AC+
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+ L +G H I+ + F++N L+ MY KCGSL AR +F+ M D D+VSW+S++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 449 VGYAQFG-CG----EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV--EEGLQLYRI 501
YAQ C ++A LFR +R V + +TL +L C H G V E Y
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ G+ +V++ + G+V E + +M + D+V+W +L +
Sbjct: 173 ---KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKA 220
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 314/602 (52%), Gaps = 65/602 (10%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
++EA+ F LQ + + P ++ ++ S +LG VH + DA +
Sbjct: 126 FSEAIGLFSRLQGEGH-ELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGT 184
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+++ Y CG E AR VFD + +++VSWT M+A +N +++L+ +M G P
Sbjct: 185 ALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKP 244
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+ FTF S+++AC GL +G+ +H K+ + L LI +Y K + DA VF
Sbjct: 245 NNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVF 304
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
EM ++ W+ +IA A + EA+ +F
Sbjct: 305 E----------------------------EMPKDDVIPWSFMIARYAQSEQSEEAIEMFC 336
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-- 357
M ++P+ T+ SLL AC S + L G QIH +++K G NV V NA++ A
Sbjct: 337 RMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCG 396
Query: 358 ------ELFR----------------------------LFSLMLASQTKPDHITFNDVMG 383
+LF LF ML Q + +T++ V+
Sbjct: 397 RMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLR 456
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
ACA +A+LE G+Q+H +KT + V N L+DMY KCG++ AR +F+ + + D VS
Sbjct: 457 ACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVS 516
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+++I GY+ G EALK F M + +P+ VT VG+L+ACS+ GL++ G ++ M
Sbjct: 517 WNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMV 576
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
EY I P E +C+V LL R+G + +A ++++ F+ ++VW++LL++C H +V++G
Sbjct: 577 EEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELG 636
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+ +A+ +L+I+P + A VLL NIYA++ +W VA + SMK +G+RK PG SWIE Q +
Sbjct: 637 RISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGR 696
Query: 624 IH 625
+H
Sbjct: 697 VH 698
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 187/413 (45%), Gaps = 70/413 (16%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + +C + A +V D+ + W + + + + E+L F ++ F+
Sbjct: 188 DCYSVCGYAECARQVFDAIEYKDMVSWT-GMVACYVENECFEESLKLFSRMRI-VGFKPN 245
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+A ++ AC L +G+ VH + + + ++++Y K G ++DA VF+
Sbjct: 246 NFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFE 305
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EMP+ +V+ W+ MIA +Q+ Q AIE++ +M + ++P+QFT S+++AC+ L + L
Sbjct: 306 EMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQL 365
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+H HV+K ++ NAL+ MY K R+ ++ +FS
Sbjct: 366 GNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFS------------------- 406
Query: 260 LDFARTVFNEMESPNLA--SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
ESPN SWNT+I G N +A+ LF +M + ++ +T S+L
Sbjct: 407 -----------ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVL 455
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------------- 356
AC +L G QIHS +K + N V NA++ A
Sbjct: 456 RACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQV 515
Query: 357 ---------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
GE + F ML ++ KPD +TF ++ AC+ L+ G
Sbjct: 516 SWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRG 568
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 187/391 (47%), Gaps = 16/391 (4%)
Query: 180 DQFTFGSIIRAC--SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
+ + +GS++++C +G C G+ LH +IK + L + N L+ Y K+D + DA
Sbjct: 43 NTYIYGSLLQSCIRNGDC--ATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAK 100
Query: 238 VFSSIARKDITSWGSMIDGFSK-LDFARTV--FNEMESP----NLASWNTIIAGVASCSN 290
+F + ++ S+ ++I G+S+ L F+ + F+ ++ N ++T++ + S
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCN 349
A S+ + + D V + L C S + Q+ I K S +
Sbjct: 161 AKLGFSVHACVYKLGFDSDAF-VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVA 219
Query: 350 AILQHQA-GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
++++ E +LFS M KP++ TF V+ AC + +G +H KT
Sbjct: 220 CYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLE 279
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++FV L+D+Y+K G + A ++F M DV+ WS +I YAQ EEA+++F RMR
Sbjct: 280 ELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR 339
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
V PN TL +L AC+ + ++ G Q++ + G+ + ++D+ A+ GR+
Sbjct: 340 RGLVLPNQFTLASLLQACASLVDLQLGNQIH-CHVVKVGLDMNVFVSNALMDMYAKCGRM 398
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++ D V W +++ GN
Sbjct: 399 ENSLQLFSESPNCTD-VSWNTVIVGYVQAGN 428
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 361 RLFSLMLASQTKPDHITF--NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
R F S + P+ T+ ++ +C G LHC I+K G LD+F N L++
Sbjct: 28 RSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLN 87
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
YVK SL A +LF+ M D + VS+ +LI GY+Q EA+ LF R++ G N
Sbjct: 88 FYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFV 147
Query: 479 LVGVL 483
VL
Sbjct: 148 FSTVL 152
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 193/615 (31%), Positives = 319/615 (51%), Gaps = 75/615 (12%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNF--------RIRPSTYADLISACSSLRSLQLGRKVHDH 105
L K+ YN L+ F FL+ + + S Y ++ C L+ G +H H
Sbjct: 5 LTKKFRYN--LLQFTFLKQRFHHSPCEPELTHLSSSLYMKILQLCIETEDLKQGCLIHSH 62
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
I+ + + L ++ Y K G +AR VFD MP+RNVVSWTA I+G ++NG A
Sbjct: 63 IIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQISGYAKNGHYQDA 122
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ ++ QM ++G+ +QFT+GS++RAC+GL C+ G Q+H + K+ +L Q+AL+ +
Sbjct: 123 LLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSALVDL 182
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
++K + DA +F +++ +D+ S WN +I G
Sbjct: 183 HSKCGNMEDARYLFETMSERDVVS----------------------------WNAVIGGY 214
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A+ +++ +F M + PD T+ S+L A + +L + QIH II+ GF S++
Sbjct: 215 AAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHI 274
Query: 346 PVCNAILQHQA-GELFRLFSLMLASQTKPDHITFNDVM---------------------- 382
+ +++ A E + S + S K D I+F +M
Sbjct: 275 DLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQH 334
Query: 383 --------------GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
CA +ASL +G Q+H +K + DV N L+DMY K G +
Sbjct: 335 IFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIED 394
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A F M++ +V+SW+SLI GY + G G EA+ L+++M G++PN +T + +L ACSH
Sbjct: 395 ATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSH 454
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GL EG + + M +Y I+P E SC++DL AR G++ EA + I +M + +W
Sbjct: 455 SGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWG 514
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
++L +C +G++ +G+ AA ++L++DP NSA V+L IYA+SG W++ R+ M+ R
Sbjct: 515 AILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRS 574
Query: 609 VRKVPGQSWIEIQTK 623
++K+PG S I+ K
Sbjct: 575 LKKIPGYSIIQSTNK 589
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 321/628 (51%), Gaps = 108/628 (17%)
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN------------------ 145
D I+ D V+ N +++ Y + G+L AR++FDEMP+RN
Sbjct: 76 DQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVE 135
Query: 146 -------------VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
VVSWTA I+G +NG A++L+ ++L+SG+ P+ TF S++RAC
Sbjct: 136 ESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACG 195
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L GLG + V+K+ +L N+LI + + I A VF + ++D+ SW +
Sbjct: 196 ELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTA 255
Query: 253 MIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
++D + + L AR +F+EM N SW+ +IA + A EA+ LFS+M P+
Sbjct: 256 ILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPN 315
Query: 310 --------------------------------------GLTVRSLLCACTSPLSLYQGMQ 331
G ++ L C C P G
Sbjct: 316 ISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKP---DDGRL 372
Query: 332 IHSYIIKK---------GFYS-------------NVP----------VCNAILQHQAGEL 359
+ I++K G YS +P + + Q ++
Sbjct: 373 VFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKV 432
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+F+ +L S P+ TF+ V+ ACA++ASL+ G +H I+K G+ D+FV L DM
Sbjct: 433 LEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVT 478
Y KCG +GS++++F M + + +SW+ +I G A+ G E+L LF M R+S V PN +
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
L+ VL ACSH GLV++GL + M+ YGI P + +CVVDLL+R+GR++EAE+FI +
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
F + W +LL+ CK + + + +R A+ + ++ NSA VLL NIYAS+G+W +V+
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ M+E+G++K G SW+E++ ++H+
Sbjct: 673 NIRKLMREKGLKKSGGCSWVEVRNQVHS 700
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 41/321 (12%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ L +A + D R + W + + + EAL F + F+
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWS-AMIARYSQSGYAEEALKLFSKMVQE-GFKPN 315
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
S +A +SA +SLR+L G +H H+ D + + ++++Y KCG +D R+VFD
Sbjct: 316 ISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFD 375
Query: 140 EMPQRNVVSWTAMIAGCSQNGQ---------------------------EN----AAIEL 168
+ ++NVV W +M+ G S NG+ EN +E+
Sbjct: 376 LILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEV 435
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ +L SG P++ TF S++ AC+ + + G +H +IK + AL MY K
Sbjct: 436 FNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAK 495
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA---RTVFNEME-----SPNLASWNT 280
I + VF + K+ SW MI G ++ FA +F EME +PN +
Sbjct: 496 CGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLS 555
Query: 281 IIAGVASCSNANEAMSLFSEM 301
++ + C ++ + F+ M
Sbjct: 556 VLFACSHCGLVDKGLWYFNSM 576
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 172/407 (42%), Gaps = 70/407 (17%)
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSE-------------------------------HGS 214
S+++ S + G LHAH+IK+ GS
Sbjct: 26 SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGS 85
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG---FSKLDFARTVFNEME 271
L+ N +I+ Y ++ ++ A +F + ++ SW ++I G + +++ + F
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
N+ SW I+G EA+ LF + + + P+ +T S++ AC GM
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
I ++K GF + V N++ IT + MG +
Sbjct: 206 ILGLVVKAGFEHYLSVSNSL------------------------ITLSLRMG------EI 235
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
++ ++ + K DV ++D YV+ G L AR +F+ M + + +SWS++I Y
Sbjct: 236 DLARRVFDRMEKR----DVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARY 291
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+Q G EEALKLF +M G +PN L+A + + + G+ ++ + + GI
Sbjct: 292 SQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHV-TKIGIDKD 350
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S ++DL + G+ + + + + ++V W S++ +G
Sbjct: 351 VFIGSSLIDLYCKCGKPDDGR-LVFDLILEKNVVCWNSMVGGYSING 396
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 11/186 (5%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST++ ++ AC+S+ SL G VH I+ Q D + + +MY KCG + ++ VF+
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACS--GLCCV 197
MP++N +SWT MI G +++G ++ L+ +M + S + P++ S++ ACS GL
Sbjct: 509 MPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK 568
Query: 198 GL---GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM 253
GL + IK + G H ++ + ++ R+ +A +I + + +W ++
Sbjct: 569 GLWYFNSMEKVYGIKPK-GKHY---TCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAAL 624
Query: 254 IDGFSK 259
+ G K
Sbjct: 625 LSGCKK 630
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 136/330 (41%), Gaps = 70/330 (21%)
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQT 371
T SLL ++ + QG +H+++IK GF S + +L L L
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIA-----------IKLLILYL---- 67
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
C A ++ I+K D+ V N ++ YV+ G+L AR
Sbjct: 68 ------------NCRKFAEIDQ-------IVKEFDGSDLVVSNCMISAYVQWGNLVQARL 108
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGE-------------------------------EA 460
LF+ M + + VSWS+LI G ++G E EA
Sbjct: 109 LFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEA 168
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
LKLF R+ SGVRPN VT V+ AC +G G+ + ++ G + ++
Sbjct: 169 LKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKA-GFEHYLSVSNSLIT 227
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
L R G + A ++M D+V W ++L + G++ +R + + + + + +A
Sbjct: 228 LSLRMGEIDLARRVFDRME-KRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSA 286
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVR 610
++ Y+ SG EE +L M + G +
Sbjct: 287 MIAR---YSQSGYAEEALKLFSKMVQEGFK 313
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 303/553 (54%), Gaps = 50/553 (9%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
L A VF+ + + N + W MI G + + +++ LYV M+ GL+P+ +TF ++++
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ G+Q+H V+K L +LI+MY + R+ DA+ VF + +D+ S+
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 251 GSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
++I G++ + A+ +F+E+ ++ SWN +I+G A EA+ LF EM +
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGE------L 359
PD T ++L AC S+ G Q+HS++ GF SN+ + NA+ L + GE L
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 360 FR----------------------------LFSLMLASQTKPDHITFNDVMGACAAMASL 391
F+ LF ML S P+ +T V+ ACA + ++
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313
Query: 392 EMGTQLHCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
++G +H YI K G+ + L+DMY KCG + +A ++FN M + SW+++I
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
G+A G + + LF RMR G+ P+ +T VG+L+ACSH G+++ G ++R M +Y +
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
P E C++DLL +G EAE+ IN M + D V+W SLL +CK HGNV++ + A+N
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493
Query: 570 ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT------- 622
++KI+P N ++ +LL NIYAS+G+WE+VAR+ + + ++KVPG S IE+ +
Sbjct: 494 LIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVV 553
Query: 623 --KIHASGNDISG 633
K H +I G
Sbjct: 554 GDKFHPQNREIYG 566
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 193/415 (46%), Gaps = 53/415 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ L+ +C+ ++ G+++H +L D +H +++MY + LEDA VFD
Sbjct: 66 TFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRS 125
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G ++ G A+EL+
Sbjct: 126 SHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFE 185
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M++ + PD+ T+ +++ AC+ + LGRQ+H+ V S+L NALI +Y+K
Sbjct: 186 EMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG 245
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIA 283
+ A +F ++ KD+ SW ++I G++ ++ A +F EM E+PN + +++
Sbjct: 246 EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLP 305
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY-------QGMQIHSYI 336
A + + + D+ L G+T S L TS + +Y Q+ + +
Sbjct: 306 ACAHLGAIDIGRWIHVYI-DKRL--KGVTNASSL--RTSLIDMYAKCGDIEAAHQVFNSM 360
Query: 337 IKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+ K S N + + +A F LFS M +PD ITF ++ AC+ L++G
Sbjct: 361 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGR 420
Query: 396 QLHCYIMKTGLALDVFVMNGLM-DMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + + G M D+ G A E+ N ME +PD V W SL+
Sbjct: 421 HIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 475
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 40/353 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + Y EAL F+ + N R STY ++SAC+ S++LGR+VH +
Sbjct: 167 MISGYAETGCYKEALELFEEMMK-MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDH 225
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N ++++Y KCG +E A +F + ++V+SW +I G + A+ L+
Sbjct: 226 GFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLF 285
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS--QNALIAMYT 227
+ML+SG P+ T S++ AC+ L + +GR +H ++ K G S + +LI MY
Sbjct: 286 QEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 345
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K I A VF+S+ K ++SW +MI GF A
Sbjct: 346 KCGDIEAAHQVFNSMLHKSLSSWNAMIFGF----------------------------AM 377
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
A+ + LFS M + PD +T LL AC+ L G I + + Y P
Sbjct: 378 HGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQD--YKMTPK 435
Query: 348 -----CNAILQHQAGELFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMG 394
C L +G LF+ M+ + + +PD + + ++ AC ++E+
Sbjct: 436 LEHYGCMIDLLGHSG-LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELA 487
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 47/309 (15%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +VF ++ PN WNT+I G A S+ +++L+ M L+P+ T L
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGF----YSNVPVCNAILQH-QAGELFRLFSLMLASQT 371
L +C + +G QIH ++K GF Y + + + +Q+ + + +++F
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVF-------- 122
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
D + DV+ A L+ Y G + SA++
Sbjct: 123 --DRSSHRDVVSYTA-----------------------------LITGYASRGDIRSAQK 151
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
LF+ + DVVSW+++I GYA+ GC +EAL+LF M VRP+ T V VL+AC+H G
Sbjct: 152 LFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGS 211
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+E G Q++ + +++G + + ++DL ++ G V A +++ D++ W +L+
Sbjct: 212 IELGRQVHSWV-DDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY-KDVISWNTLI 269
Query: 552 ASCKTHGNV 560
TH N+
Sbjct: 270 GG-YTHMNL 277
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 17/162 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V +S L + W+ +F ++ A +FD I
Sbjct: 342 DMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF----AMHGRADASFDLFSRMRKIGIE 397
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQ-----PDAVLHNHILNMYGKCGSLE 132
P T+ L+SACS L LGR HI S Q P + ++++ G G +
Sbjct: 398 PDDITFVGLLSACSHSGMLDLGR----HIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 453
Query: 133 DARMVFDEMP-QRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+A + + M + + V W +++ C +G A E + Q L
Sbjct: 454 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELA-ESFAQNL 494
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 313/586 (53%), Gaps = 95/586 (16%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I PS T +++++ ++ R L+ G+KVH I+ + + + N +LNMY KCG A+
Sbjct: 142 IEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 136 MVFD-------------------------------EMPQRNVVSWTAMIAGCSQNGQENA 164
+VFD +M +R++V+W +MI+G +Q G +
Sbjct: 202 VVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLR 261
Query: 165 AIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A++++ +ML+ ++ PD+FT S++ AC+ L + +G Q+H+H++ + I NALI
Sbjct: 262 ALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALI 321
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
+MY++ + A + KD+ I+GF+ L +
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLK-----IEGFTAL---------------------LD 355
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G + NEA ++F + DR+++ A T+ + Y+ + G Y
Sbjct: 356 GYIKLGDMNEAKNIFDSLKDRDVV-----------AWTAMIVGYE---------QHGLY- 394
Query: 344 NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
GE LF M+ + +P+ T ++ +++ASL G Q+H +K
Sbjct: 395 -------------GEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVK 441
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALK 462
+G V V N L+ MY K GS+ SA F+ + + D VSW+S+I+ AQ G EEAL+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M G+RP+H+T VGV +AC+H GLV +G Q + +M++ IIPT +C+VDL
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + EA++FI +M + D+V W SLL++C+ + N+D+GK AAE +L ++P NS A
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
L N+Y++ GKWEE A++ SMK+ V+K G SWIE++ K+HA G
Sbjct: 622 ALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFG 667
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 227/457 (49%), Gaps = 37/457 (8%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +L+ Y K G ++ + FD +PQR+ VSWT MI G GQ + AI + +M++ G+
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P QFT +++ + + C+ G+++H+ ++K ++ N+L+ MY K + A V
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203
Query: 239 FSSIARKDITSWGSMID---GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + KDI+SW +MI ++D A F +M ++ +WN++I+G A+
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRAL 263
Query: 296 SLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+FS+M D L PD T+ S+L AC + L G QIHS+I+ GF + V NA
Sbjct: 264 DMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNA---- 319
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
L ++S +T I + GT+ L ++ F
Sbjct: 320 ----LISMYSRCGGVETARRLIE--------------QRGTK--------DLKIEGF--T 351
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
L+D Y+K G + A+ +F+ ++D DVV+W+++IVGY Q G EA+ LFR M RP
Sbjct: 352 ALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRP 411
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
N TL +L+ S + + G Q++ G I + + ++ + A+AG + A
Sbjct: 412 NSYTLAAMLSVASSLASLGHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGSITSASRA 470
Query: 535 INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
+ + + D V W S++ + HG+ + E +L
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 180/424 (42%), Gaps = 79/424 (18%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQ--------LHAHVIKSEHGSHLISQNALIAMYTKFD 230
P + +++ C+ L + + +H VIKS + N L+ +Y+K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
L A +F + + SW +++ ++K +D + F+ + + SW T+I G +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
++A+ + EM + P T+ ++L + + L G ++HS+I+K G NV V
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
N++L M A P MA + + +
Sbjct: 184 SNSLLN------------MYAKCGDP-------------MMAKV---------VFDRMVV 209
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D+ N ++ ++++ G + A F M + D+V+W+S+I GY Q G AL +F +M
Sbjct: 210 KDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKM 269
Query: 468 -RSSGVRPNHVTLVGVLTACS-----------HVGLVEEGLQLYRIMQNEY--------G 507
R S + P+ TL VL+AC+ H +V G + I+ N G
Sbjct: 270 LRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 508 IIPTR---ERR----------SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
+ R E+R + ++D + G ++EA++ + + D D+V W +++
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLK-DRDVVAWTAMIVGY 388
Query: 555 KTHG 558
+ HG
Sbjct: 389 EQHG 392
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 15/287 (5%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
+++A + DS R W + + LY EA+ F + RP++Y A
Sbjct: 363 MNEAKNIFDSLKDRDVVAWT-AMIVGYEQHGLYGEAINLFRSMVGEEQ---RPNSYTLAA 418
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP-QR 144
++S SSL SL G+++H + S + N ++ MY K GS+ A FD + +R
Sbjct: 419 MLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCER 478
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+ VSWT+MI +Q+G A+EL+ ML GL PD T+ + AC+ V GRQ
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 205 AHVIKSEHGSHLISQNA-LIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG---FSK 259
+ + +S A ++ ++ + + +A + D+ +WGS++ +
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKN 598
Query: 260 LDFARTVFNE---MESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+D + +E N +++ + ++C EA + M D
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME------------------- 437
+HC ++K+GL V++MN LM++Y K G AR+LF+ M
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 438 ------------DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
D VSW+++IVGY G +A+++ M G+ P+ TL VL +
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
+ +E G +++ + + G+ + ++++ A+ G A+ ++M DI
Sbjct: 156 VAATRCLETGKKVHSFIV-KLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVV-KDIS 213
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKID 574
W +++A G +D+ E + + D
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERD 242
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 204/609 (33%), Positives = 328/609 (53%), Gaps = 43/609 (7%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP----STYADLIS--------------- 88
DLF + ++N+ V + +N RP + +AD++
Sbjct: 68 LDLFDRMPRKNVVAWTSVMSGYTRNG-----RPEAALAMFADMVESGVAPNDFACNAALV 122
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ L +L+ G +VH + + DA + + ++ MY +CGSL A+ VFD M +VV
Sbjct: 123 ACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVG 182
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
+T++I+ +NG+ A E +QML+ GL P++ T +I+ AC + LG+Q+H ++I
Sbjct: 183 YTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLI 238
Query: 209 KS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFA 263
K + S ALI Y++ A VF S+ K++ SW SM+ + +L+ A
Sbjct: 239 KKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEA 298
Query: 264 RTVFNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
VF +M S PN + + ++ +C + L +LI D + V + L +
Sbjct: 299 LQVFGDMISEGVDPNEFALSIVLG---ACGSIGLGRQLHCSAIKHDLITD-IRVSNALLS 354
Query: 320 CTSPLSLYQGMQ-IHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHIT 377
L + ++ + + I S +A Q+ GE L M + P+
Sbjct: 355 MYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYA 414
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F+ V+ +CA +ASL+ G Q HC +K G ++ N L++MY KCG +GSAR F+ M
Sbjct: 415 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 474
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DV SW+SLI G+AQ G +AL++F +MRS+G++P+ T +GVL C+H G+VEEG
Sbjct: 475 THDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGEL 534
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+R+M ++Y P +C++D+L R GR EA IN M F+ D ++WK+LLASCK H
Sbjct: 535 FFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N+D+GK AA+ ++++ +SA+ VL+ NIYA G+WE+ ++ M E GV+K G SW
Sbjct: 595 RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 654
Query: 618 IEIQTKIHA 626
IEI ++H
Sbjct: 655 IEINNEVHT 663
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 244/535 (45%), Gaps = 87/535 (16%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
PD VL LN K G L DA +FD MP++NVV+WT++++G ++NG+ AA+ ++ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
++SG+ P+ F + + AC+ L + G Q+H+ +++ + LI MY++ +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
A VF + M+SP++ + ++I+
Sbjct: 166 PAAKEVF----------------------------DRMDSPDVVGYTSLISAFCRNGEFE 197
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK------------- 339
A +M + L P+ T+ ++L AC L G QIH Y+IKK
Sbjct: 198 LAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTA 253
Query: 340 --GFYSN-------------------VPVCNA----ILQHQAGELFRLFSLMLASQTKPD 374
FYS V C+ I + E ++F M++ P+
Sbjct: 254 LIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPN 313
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+ V+GAC S+ +G QLHC +K L D+ V N L+ MY + G + + N
Sbjct: 314 EFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLN 370
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+E+PD+VSW++ I Q G GE+A+ L +M S G PN VL++C+ V +++
Sbjct: 371 KIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQ 430
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD----DDIVVWKSL 550
G+Q + + + G + ++++ ++ G++ A ++AFD D+ W SL
Sbjct: 431 GMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSA-----RLAFDVMHTHDVTSWNSL 484
Query: 551 LASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ HG+ ++V + N +K D + +++ CN + E RLM
Sbjct: 485 IHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLM 539
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 329/639 (51%), Gaps = 71/639 (11%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYAD- 85
+D+A V D R + + + S+ K + ++A+ F + + +RP+ +
Sbjct: 150 FVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSG---VRPNEFGFS 206
Query: 86 -LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC+ R L+ GRKVH ++ + D N +++MY K G + A +VF ++P+
Sbjct: 207 CVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKT 266
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG--RQ 202
+VVSW A I+GC +G + A+EL +QM SGL+P+ FT SI++AC+G RQ
Sbjct: 267 DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQ 326
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H +IK+ S AL+ MY K+ LD
Sbjct: 327 IHGFMIKACADSDDYIGVALVDMYAKY----------------------------GLLDD 358
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR VF + +L WN +I+G + E++SLF M + T+ ++L + S
Sbjct: 359 ARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTAS 418
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QHQAGELF----- 360
++ Q+H+ K GF S+ V N ++ +H + +
Sbjct: 419 LEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSM 478
Query: 361 --------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+LF ML +PD + ++ ACA++++ E G Q+H +++K
Sbjct: 479 ITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKF 538
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DVF N L+ Y KCGS+ A F+ + D VVSWS++I G AQ G G+ AL +FRR
Sbjct: 539 MTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRR 598
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M + PNH+TL VL AC+H GLV+E + M+ +GI T E SC++DLL RAG
Sbjct: 599 MVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAG 658
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
++ +A + +N M F+ + VW +LLA+ + H + ++GK AAE + ++P S VLL N
Sbjct: 659 KLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLAN 718
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
YAS+G W+EVA++ MK+ V+K P SW+E++ ++H
Sbjct: 719 TYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVH 757
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 146/608 (24%), Positives = 252/608 (41%), Gaps = 116/608 (19%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH---NHILNMYGKCGSLEDARM 136
P + + L++ ++ +SL LG +H H+L S +LH NH+L+ Y KC AR
Sbjct: 4 PESISPLLTRYAATQSLFLGAHIHAHLLKS-----GLLHAFRNHLLSFYSKCRLPGSARR 58
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFDE P VSW++++ S N A+ + M G+ ++F +++
Sbjct: 59 VFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPD--- 115
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMID 255
GLG Q+HA + + + NAL+AMY F + +A VF AR ++ SW M+
Sbjct: 116 AGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
F K D CS+A E LF EM + P+
Sbjct: 176 AFVKND-------------------------RCSDAVE---LFGEMVWSGVRPNEFGFSC 207
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQTKP 373
++ ACT L G ++H+ +++ G+ +V NA++ + G++ + +L+ K
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDI-HMAALVFGKVPKT 266
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN------------------- 414
D +++N + C + +L + +GL +VF ++
Sbjct: 267 DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQ 326
Query: 415 ------------------GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
L+DMY K G L AR++F ++ D++ W++LI G + GC
Sbjct: 327 IHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGC 386
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
E+L LF RMR G N TL VL + + + + + Q++ + + + G + +
Sbjct: 387 HGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAE-KIGFLSDSHVVN 445
Query: 517 CVVD------LLARAGRVHEAEDFINQMAF----------------------------DD 542
++D L A +V E N +AF +
Sbjct: 446 GLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEP 505
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLM 601
D V SLL +C + + GK+ +++K T+ A L YA G E+
Sbjct: 506 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAF 565
Query: 602 GSMKERGV 609
+ ++GV
Sbjct: 566 SGLPDKGV 573
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 292/529 (55%), Gaps = 62/529 (11%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A VFD+MP+RN+V+WT MI +Q G AI+L++ M SG +PD+FT+ S++ AC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L + LG+QLH+ VI+ + +L+ MY K
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAK-----------------------CA 105
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN-EAMSLFSEMGDRELIPDGLT 312
DG +D +R VF +M N+ SW II A + EA+ LF +M + P+ +
Sbjct: 106 ADG--SVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFS 163
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKG-------------------------------F 341
S+L AC + Y G Q++SY +K G F
Sbjct: 164 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 223
Query: 342 YSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
N+ NAI+ A E F LF+ + + TF ++ A++ ++ G Q
Sbjct: 224 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 283
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H ++K G + + N L+ MY +CG++ +A ++FN MED +V+SW+S+I G+A+ G
Sbjct: 284 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 343
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
AL++F +M +G +PN +T V VL+ACSHVG++ EG + + M E+GI+P E +
Sbjct: 344 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 403
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL R+G + EA +FIN M D +VW++LL +C+ HGN ++G+ AAE IL+ +P
Sbjct: 404 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 463
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ AA +LL N++AS+G+W++V ++ SMKER + K G SWIE++ ++H
Sbjct: 464 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 512
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 197/409 (48%), Gaps = 70/409 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC---GSLEDARMVF 138
TY+ ++SAC+ L L LG+++H ++ D + +++MY KC GS++D+R VF
Sbjct: 58 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 117
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQ-ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
++MP+ NV+SWTA+I +Q+G+ + AIEL+ +M+ + P+ F+F S+++AC L
Sbjct: 118 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 177
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G Q++++ +K S N+LI+MY + R+ DA F + K++ S+ +++DG+
Sbjct: 178 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 237
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+K NL S EA LF+E+ D + T SLL
Sbjct: 238 AK--------------NLKS--------------EEAFLLFNEIADTGIGISAFTFASLL 269
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
S ++ +G QIH ++K G+ SN +CNA++
Sbjct: 270 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 329
Query: 353 ----------QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCY 400
+H A +F ML + TKP+ IT+ V+ AC+ + + G + +
Sbjct: 330 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 389
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G+ + ++D+ + G L A E N M D + W +L+
Sbjct: 390 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 438
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 157/324 (48%), Gaps = 37/324 (11%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
IRP+ +++ ++ AC +L G +V+ + + + N +++MY + G +EDAR
Sbjct: 157 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 216
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
FD + ++N+VS+ A++ G ++N + A L+ ++ +G+ FTF S++ + +
Sbjct: 217 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 276
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G G Q+H ++K + S+ NALI+MY++ I A+ VF+ + +++ SW SMI
Sbjct: 277 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 336
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
GF+K F A A+ +F +M + P+ +T +
Sbjct: 337 GFAKHGF----------------------------ATRALEMFHKMLETGTKPNEITYVA 368
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQ 370
+L AC+ + +G + + + K+ + VP C L ++G L + +
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKE--HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426
Query: 371 TKPDHITFNDVMGACAAMASLEMG 394
D + + ++GAC + E+G
Sbjct: 427 LMADALVWRTLLGACRVHGNTELG 450
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 175/366 (47%), Gaps = 34/366 (9%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EA + F+ + + T I T+A L+S +S+ ++ G ++H +L + + + N +
Sbjct: 245 EAFLLFNEIAD-TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 303
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++MY +CG++E A VF+EM RNV+SWT+MI G +++G A+E++ +ML++G P++
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 363
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVF 239
T+ +++ ACS + + G Q H + + EHG + ++ + + +++A
Sbjct: 364 ITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 422
Query: 240 SSIA-RKDITSWGSM-----IDGFSKLD-FARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+S+ D W ++ + G ++L A + E E + A++ + AS
Sbjct: 423 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWK 482
Query: 293 EAMSLFSEMGDRELIPDG---------LTVRSLLCACTSPLS--LYQGM-QIHSYIIKKG 340
+ + + M +R LI + R + + P + +YQ + Q+ S I + G
Sbjct: 483 DVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMG 542
Query: 341 FYSNVPVCNAILQHQAGELFRL---------FSLMLASQTKPDHITFN-DVMGAC-AAMA 389
+ + ++ + E F F L+ SQ+KP I N V G C A+
Sbjct: 543 YIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIK 602
Query: 390 SLEMGT 395
+ M T
Sbjct: 603 YISMAT 608
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 292/529 (55%), Gaps = 62/529 (11%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A VFD+MP+RN+V+WT MI +Q G AI+L++ M SG +PD+FT+ S++ AC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L + LG+QLH+ VI+ + +L+ MY K
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAK-----------------------CA 100
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN-EAMSLFSEMGDRELIPDGLT 312
DG +D +R VF +M N+ SW II A + EA+ LF +M + P+ +
Sbjct: 101 ADG--SVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFS 158
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKG-------------------------------F 341
S+L AC + Y G Q++SY +K G F
Sbjct: 159 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 218
Query: 342 YSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
N+ NAI+ A E F LF+ + + TF ++ A++ ++ G Q
Sbjct: 219 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 278
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H ++K G + + N L+ MY +CG++ +A ++FN MED +V+SW+S+I G+A+ G
Sbjct: 279 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 338
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
AL++F +M +G +PN +T V VL+ACSHVG++ EG + + M E+GI+P E +
Sbjct: 339 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 398
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL R+G + EA +FIN M D +VW++LL +C+ HGN ++G+ AAE IL+ +P
Sbjct: 399 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 458
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ AA +LL N++AS+G+W++V ++ SMKER + K G SWIE++ ++H
Sbjct: 459 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 507
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 197/409 (48%), Gaps = 70/409 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC---GSLEDARMVF 138
TY+ ++SAC+ L L LG+++H ++ D + +++MY KC GS++D+R VF
Sbjct: 53 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 112
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQ-ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
++MP+ NV+SWTA+I +Q+G+ + AIEL+ +M+ + P+ F+F S+++AC L
Sbjct: 113 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 172
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G Q++++ +K S N+LI+MY + R+ DA F + K++ S+ +++DG+
Sbjct: 173 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 232
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+K NL S EA LF+E+ D + T SLL
Sbjct: 233 AK--------------NLKS--------------EEAFLLFNEIADTGIGISAFTFASLL 264
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
S ++ +G QIH ++K G+ SN +CNA++
Sbjct: 265 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 324
Query: 353 ----------QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCY 400
+H A +F ML + TKP+ IT+ V+ AC+ + + G + +
Sbjct: 325 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 384
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G+ + ++D+ + G L A E N M D + W +L+
Sbjct: 385 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 433
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 157/324 (48%), Gaps = 37/324 (11%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
IRP+ +++ ++ AC +L G +V+ + + + N +++MY + G +EDAR
Sbjct: 152 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 211
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
FD + ++N+VS+ A++ G ++N + A L+ ++ +G+ FTF S++ + +
Sbjct: 212 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 271
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G G Q+H ++K + S+ NALI+MY++ I A+ VF+ + +++ SW SMI
Sbjct: 272 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 331
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
GF+K F A A+ +F +M + P+ +T +
Sbjct: 332 GFAKHGF----------------------------ATRALEMFHKMLETGTKPNEITYVA 363
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQ 370
+L AC+ + +G + + + K+ + VP C L ++G L + +
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKE--HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421
Query: 371 TKPDHITFNDVMGACAAMASLEMG 394
D + + ++GAC + E+G
Sbjct: 422 LMADALVWRTLLGACRVHGNTELG 445
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 175/366 (47%), Gaps = 34/366 (9%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EA + F+ + + T I T+A L+S +S+ ++ G ++H +L + + + N +
Sbjct: 240 EAFLLFNEIAD-TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 298
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++MY +CG++E A VF+EM RNV+SWT+MI G +++G A+E++ +ML++G P++
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 358
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVF 239
T+ +++ ACS + + G Q H + + EHG + ++ + + +++A
Sbjct: 359 ITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 417
Query: 240 SSIA-RKDITSWGSM-----IDGFSKLD-FARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+S+ D W ++ + G ++L A + E E + A++ + AS
Sbjct: 418 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWK 477
Query: 293 EAMSLFSEMGDRELIPDG---------LTVRSLLCACTSPLS--LYQGM-QIHSYIIKKG 340
+ + + M +R LI + R + + P + +YQ + Q+ S I + G
Sbjct: 478 DVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMG 537
Query: 341 FYSNVPVCNAILQHQAGELFRL---------FSLMLASQTKPDHITFN-DVMGAC-AAMA 389
+ + ++ + E F F L+ SQ+KP I N V G C A+
Sbjct: 538 YIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIK 597
Query: 390 SLEMGT 395
+ M T
Sbjct: 598 YISMAT 603
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 294/530 (55%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF + + N + W M+ G + + +A++LYV M+ GL+P+ +TF ++++C+
Sbjct: 22 VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K + L +LI+MY + R+ DA VF + +D+ S+ ++I G
Sbjct: 82 FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141
Query: 257 FS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ + A+ +F+E+ ++ SWN +I+G A + EA+ LF EM + PD T+
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---- 361
++L AC S+ G Q+HS+I GF SN+ + NA++ A LF
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261
Query: 362 ------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
LF ML S P+ +T ++ ACA + ++++G +
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321
Query: 398 HCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K + + L+DMY KCG + +A ++FN M + SW+++I G+A G
Sbjct: 322 HVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 381
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
LF RMR +G+ P+ +T VG+L+ACSH G ++ G +++ M +Y I P E
Sbjct: 382 RANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHY 441
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL +G EA++ I M + D V+W SLL +C+ HGN+++ + A N++K++P
Sbjct: 442 GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEP 501
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYA++G+W+EVA++ + +G++KVPG S IEI +++H
Sbjct: 502 ENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVH 551
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 208/478 (43%), Gaps = 100/478 (20%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ L+ +C+ ++ + G+++H H+L +PD +H +++MY + G LEDA VFD
Sbjct: 68 TFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRS 127
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G ++ G A+EL+
Sbjct: 128 SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFK 187
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M+++ + PD+ T +++ AC+ V LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 188 EMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 247
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
++ A +F ++ KD+ SW ++I G++ ++ +
Sbjct: 248 QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYK-------------------------- 281
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVP--- 346
EA+ LF EM P+ +T+ S+L AC ++ G IH YI KK +N P
Sbjct: 282 --EALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR 339
Query: 347 ------------------VCNAILQH----------------QAGELFRLFSLMLASQTK 372
V N++L +A F LFS M + +
Sbjct: 340 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIE 399
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM-DMYVKCGSLGSARE 431
PD ITF ++ AC+ L++G + + + G M D+ G A+E
Sbjct: 400 PDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKE 459
Query: 432 LFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFRR-MRSSGVRPNHVTLVGVLTACS 487
+ M +PD V W SL+ + G E A R M+ P L+ + A +
Sbjct: 460 MIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATA 517
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 165/362 (45%), Gaps = 40/362 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + Y EAL F + TN R T ++SAC+ RS++LGR+VH I
Sbjct: 169 MISGYAETGSYKEALELFKEMMK-TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDH 227
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N ++++Y KCG +E A +F+ + ++VVSW +I G + A+ L+
Sbjct: 228 GFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 287
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS-EHGSHLIS-QNALIAMYT 227
+ML+SG P+ T SI+ AC+ L + +GR +H ++ K + ++ S + +LI MY
Sbjct: 288 QEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYA 347
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K I A VF+S+ K ++SW +MI GF A
Sbjct: 348 KCGDIEAAHQVFNSMLHKSLSSWNAMIFGF----------------------------AM 379
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
AN LFS M + PD +T LL AC+ L G I + + Y P
Sbjct: 380 HGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQD--YDITPK 437
Query: 348 -----CNAILQHQAGELFRLFSLMLASQT-KPDHITFNDVMGACAAMASLEMGTQLHCYI 401
C L +G LF+ M+ + +PD + + ++ AC +LE+ +
Sbjct: 438 LEHYGCMIDLLGHSG-LFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496
Query: 402 MK 403
MK
Sbjct: 497 MK 498
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 79/424 (18%)
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
DGF +A +VF ++ PN WNT++ G A S+ A+ L+ M L+P+ T
Sbjct: 14 DGFP---YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFP 70
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL------------- 359
LL +C + +G QIH +++K G+ ++ V +++ Q G L
Sbjct: 71 FLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR 130
Query: 360 -----------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
R M D +++N ++ A S + +L +M
Sbjct: 131 DVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM 190
Query: 403 KT-----------------------------------GLALDVFVMNGLMDMYVKCGSLG 427
KT G ++ ++N L+D+Y KCG +
Sbjct: 191 KTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVE 250
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
+A LF + DVVSW++LI GY +EAL LF+ M SG PN VT+V +L AC+
Sbjct: 251 TACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACA 310
Query: 488 HVGLVEEGLQLYRIMQNEYG-IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
H+G ++ G ++ + + + R+ ++D+ A+ G + A N M +
Sbjct: 311 HLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSS 369
Query: 547 WKSLLASCKTHGNVDVG----KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
W +++ HG + G R +N ++ D L+ C + SGK + +
Sbjct: 370 WNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSAC---SHSGKLDLGRHIFK 426
Query: 603 SMKE 606
SM +
Sbjct: 427 SMTQ 430
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 208/667 (31%), Positives = 317/667 (47%), Gaps = 114/667 (17%)
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC--QPDAVLHNHILNMYGKCG 129
N+ N ++ +LI + R L+ + +H ++ + + V+ N ++ Y KC
Sbjct: 53 NDGNCCYSETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCS 112
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
AR VFDE+PQ++V SWT ++ G ++NG I+ +V++L ++PD++ + I+
Sbjct: 113 DFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQ 172
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
AC G+ + +G +HA VI S +L+ MY K RI D+ VF+S+ ++ S
Sbjct: 173 ACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVS 232
Query: 250 WGSMIDGFSKLDFARTVFN-------EMESPNLA-------------------------- 276
W +MI GF +N E PN+A
Sbjct: 233 WNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAF 292
Query: 277 --------------------------SWNTIIAGVASC----------------SNANEA 294
SW+ ++ + C + EA
Sbjct: 293 EIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEA 352
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
M LF M + D T S L + SL Q+H I K G V +CNA++
Sbjct: 353 MLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSI-GVSLCNALMDA 411
Query: 355 QA--GEL----------------------------------FRLFSLMLASQTKPDHITF 378
A GEL +FS M +P+ +TF
Sbjct: 412 YAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTF 471
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ V+ +CA++ SLE G Q+H KTG A D V + L+DMY KCGS+ A ++F ++D
Sbjct: 472 SGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKD 531
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
PDV+SW+++I GYAQ G ++AL+LFR+M PN T + +L ACSH GLV+EGL+
Sbjct: 532 PDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRY 591
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +M+ YG++P E +CVVD+L R GR+ EA FI +M + D VW +LL +C+ HG
Sbjct: 592 FHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHG 651
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N+ + K AA+ +L +P + AALVLL N Y +G E + MK + +RK G SWI
Sbjct: 652 NIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKSQAMRKETGMSWI 711
Query: 619 EIQTKIH 625
I KIH
Sbjct: 712 CIGGKIH 718
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 296/572 (51%), Gaps = 39/572 (6%)
Query: 57 QNLYNEALV--AFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
Q+L N A V + + + F+ TYA I + R+L GR +H H++
Sbjct: 2 QSLINRANVYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARL 61
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+++ Y +CG L +AR +FD++P N+ W + C++ G A+ + +M +
Sbjct: 62 TYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQK 121
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
GL P+QF SI++AC L G +H ++K+ S +ALI MY+K +
Sbjct: 122 EGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEK 181
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES-------PNLASWNTIIAGVAS 287
A VF I KD+ +M+ G+++ F N ++ PN+ SWNT+IAG +
Sbjct: 182 ACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQ 241
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+ + +F M + PD ++ S++ ++G ++ +GF
Sbjct: 242 VGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGF------ 295
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
C P +T + ++ AC +A+L G ++H Y M G+
Sbjct: 296 C------------------------PSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVE 331
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
DV+V + L+DMY KCG + A+ LF M + + V+W+SLI GYA G EA++LF +M
Sbjct: 332 KDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM 391
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
S + +H+T VL ACSH G+VE G L+R MQ +Y I P E +C+VDLL RAG+
Sbjct: 392 EESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGK 451
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ EA D I M + D VW +LL +C+ HGN+++ + AAE++ +++P + + +LL N+
Sbjct: 452 LSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNL 511
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
YA +G+W A++ MK+R K PG SWIE
Sbjct: 512 YADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 543
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 186/597 (31%), Positives = 309/597 (51%), Gaps = 68/597 (11%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
+ F+ L+ + + ++ ++ C+ L+ G VH +++ ++ N +L++
Sbjct: 44 IPFEKLETIDDHSFKFHQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSL 103
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA-AIELYVQMLQSGLMPDQFT 183
Y K G + A +FD MP+R+VVS+ MI+ +N + + LY +M + + P+ T
Sbjct: 104 YLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHIT 163
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F +I AC GL + L HAH ++ S+ ++L+ Y K ++ DA F+ I
Sbjct: 164 FAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIM 223
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE-AMSLFSEMG 302
D+ SW MIDG ++ +N+ E A+ +FS+M
Sbjct: 224 ELDLVSWNIMIDGCAR-----------------------------NNSKEHAVRMFSQML 254
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------- 352
+ DG T+ S++ C+ P L GMQ H IK G P+ NA++
Sbjct: 255 KGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGV 314
Query: 353 ---------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
Q E LF ML + + +F+ ++
Sbjct: 315 ASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVY 374
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+A+LE G Q+H I+K+ LD+ V N L+DMY KCGSL A +F M DVVS +
Sbjct: 375 GNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCT 434
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
++I+ Y Q G G+EAL++ M+S G+ P+ VT +G L ACSH GLVEEG+++++IM +
Sbjct: 435 TMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIED 494
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
+ + P RE +CVVD+L RAGR++EAE+FI++M + D++VW++LL +C+ HG + +G++
Sbjct: 495 HNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGEMVLGEK 554
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
+A+ I+++ P VLL NIYA G WE+ + + G++K G SW+ ++T
Sbjct: 555 SAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKLVSHGLKKQVGCSWVALET 611
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 168/380 (44%), Gaps = 41/380 (10%)
Query: 35 VDSFLRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
++ ++ F++I + DL S C +N E V N R+ T +I
Sbjct: 212 LEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKT 271
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC-GSLEDARMVFDEMPQRNVVS 148
CS L+ G + H + + ++N ++ MY KC + +F + + N++S
Sbjct: 272 CSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIIS 331
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WTAMI+G QN Q AI L+ +ML+ G+ + F+F SI+ L + G+Q+HA +I
Sbjct: 332 WTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARII 391
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
KS G L NALI MY+K + DA VF + + D+ S +MI + +
Sbjct: 392 KSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQ--------- 442
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
EA+ + +EM L+PDG+T L AC+ + +
Sbjct: 443 -------------------HGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEE 483
Query: 329 GMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
G+++ +I+ ++ P C + +AG L + + + D + + ++G
Sbjct: 484 GVRVFKIMIED--HNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLG 541
Query: 384 ACAAMASLEMGTQLHCYIMK 403
AC + +G + IM+
Sbjct: 542 ACRVHGEMVLGEKSAQKIME 561
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 194/549 (35%), Positives = 308/549 (56%), Gaps = 19/549 (3%)
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ L +L+ G +VH + + DA + + ++ MY +CGSL A+ VFD M +VV
Sbjct: 50 ACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVG 109
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
+T++I+ +NG+ A E +QML+ GL P++ T +I+ AC + LG+Q+H ++I
Sbjct: 110 YTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLI 165
Query: 209 KS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFA 263
K + S ALI Y++ A VF S+ K++ SW SM+ + +L+ A
Sbjct: 166 KKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEA 225
Query: 264 RTVFNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
VF +M S PN + + ++ +C + L +LI D + V + L +
Sbjct: 226 LQVFGDMISEGVDPNEFALSIVLG---ACGSIGLGRQLHCSAIKHDLITD-IRVSNALLS 281
Query: 320 CTSPLSLYQGMQ-IHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHIT 377
L + ++ + + I S +A Q+ GE L M + P+
Sbjct: 282 MYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYA 341
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F+ V+ +CA +ASL+ G Q HC +K G ++ N L++MY KCG +GSAR F+ M
Sbjct: 342 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 401
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DV SW+SLI G+AQ G +AL++F +MRS+G++P+ T +GVL C+H G+VEEG
Sbjct: 402 THDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGEL 461
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+R+M ++Y P +C++D+L R GR EA IN M F+ D ++WK+LLASCK H
Sbjct: 462 FFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 521
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N+D+GK AA+ ++++ +SA+ VL+ NIYA G+WE+ ++ M E GV+K G SW
Sbjct: 522 RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 581
Query: 618 IEIQTKIHA 626
IEI ++H
Sbjct: 582 IEINNEVHT 590
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 230/507 (45%), Gaps = 87/507 (17%)
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP++NVV+WT++++G ++NG+ AA+ ++ M++SG+ P+ F + + AC+ L + G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+H+ +++ + LI MY++ + A VF
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVF--------------------- 99
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ M+SP++ + ++I+ A +M + L P+ T+ ++L AC
Sbjct: 100 -------DRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 152
Query: 321 TSPLSLYQGMQIHSYIIKK---------------GFYSN-------------------VP 346
L G QIH Y+IKK FYS V
Sbjct: 153 PRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 208
Query: 347 VCNA----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
C+ I + E ++F M++ P+ + V+GAC S+ +G QLHC +
Sbjct: 209 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAI 265
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K L D+ V N L+ MY + G + + N +E+PD+VSW++ I Q G GE+A+
Sbjct: 266 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIA 325
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
L +M S G PN VL++C+ V +++G+Q + + + G + ++++
Sbjct: 326 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMY 384
Query: 523 ARAGRVHEAEDFINQMAFD----DDIVVWKSLLASCKTHGN----VDVGKRAAENILKID 574
++ G++ A ++AFD D+ W SL+ HG+ ++V + N +K D
Sbjct: 385 SKCGQMGSA-----RLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPD 439
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLM 601
+ +++ CN + E RLM
Sbjct: 440 DSTFLGVLMGCNHSGMVEEGELFFRLM 466
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
QN + E +A ++ F ++ ++S+C+ + SL G + H L C +
Sbjct: 316 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 375
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
N ++NMY KCG + AR+ FD M +V SW ++I G +Q+G N A+E++ +M +G
Sbjct: 376 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 435
Query: 177 LMPDQFTFGSIIRACS 192
+ PD TF ++ C+
Sbjct: 436 IKPDDSTFLGVLMGCN 451
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/623 (31%), Positives = 310/623 (49%), Gaps = 96/623 (15%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ TY ++ C+ L+SL G+KVH I S+ D L +++ Y CG L++ R V
Sbjct: 97 LETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156
Query: 138 FDEMPQRNV--------------------------------------------------- 146
FD M ++NV
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDV 216
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW +MI+G NG + +Y QM+ G+ D T S++ C+ + LG+ +H+
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
IKS + N L+ MY+K LD A V
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKC----------------------------GDLDGALRV 308
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F +M N+ SW ++IAG ++ A+ L +M + D + + S+L AC SL
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL---FRLFSLM----------LASQT 371
G +H YI SN+ VCNA++ A G + +FS M + +
Sbjct: 369 DNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL 428
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
KPD T ++ ACA++++LE G ++H YI++ G + D V N L+D+YVKCG LG AR
Sbjct: 429 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
LF+ + D+VSW+ +I GY G G EA+ F MR +G+ P+ V+ + +L ACSH GL
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+E+G + + IM+N++ I P E +C+VDLL+R G + +A FI + D +W +LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
C+ + ++++ ++ AE + +++P N+ VLL NIYA + K EEV R+ + ++G+RK
Sbjct: 609 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRK 668
Query: 612 VPGQSWIEIQTKIH--ASGNDIS 632
PG SWIEI+ +++ SGN+ S
Sbjct: 669 NPGCSWIEIKGRVNLFVSGNNSS 691
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 207/473 (43%), Gaps = 86/473 (18%)
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V + A I Q G A+EL +S L + T+GS+++ C+GL + G+++H+
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELVCMCQKSEL--ETKTYGSVLQLCAGLKSLTDGKKVHS 123
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL-DFAR 264
+ + G L++ Y + + VF ++ +K++ W M+ ++K+ DF
Sbjct: 124 IIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 265 TV----------------------FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
++ F+++ ++ SWN++I+G S + ++ +M
Sbjct: 184 SICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL- 359
+ D T+ S+L C + +L G +HS IK F + N +L + G+L
Sbjct: 244 YLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 360 --FRLF-----------SLMLASQT--------------------KPDHITFNDVMGACA 386
R+F + M+A T K D + ++ ACA
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACA 363
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
SL+ G +H YI +A ++FV N LMDMY KCGS+ A +F+ M D++SW++
Sbjct: 364 RSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNT 423
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNE 505
++ GE ++P+ T+ +L AC+ + +E G +++ I++N
Sbjct: 424 MV--------GE-------------LKPDSRTMACILPACASLSALERGKEIHGYILRNG 462
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
Y R + +VDL + G + A + M D+V W ++A HG
Sbjct: 463 YS--SDRHVANALVDLYVKCGVLGLAR-LLFDMIPSKDLVSWTVMIAGYGMHG 512
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 130/256 (50%), Gaps = 13/256 (5%)
Query: 63 ALVAFDFLQNNTNF-RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+V D + NT ++P T A ++ AC+SL +L+ G+++H +IL + D + N
Sbjct: 412 TMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 471
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++++Y KCG L AR++FD +P +++VSWT MIAG +G N AI + +M +G+ P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 531
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWN 237
D+ +F SI+ ACS + G + +++K++ L ++ + ++ + A+
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 590
Query: 238 VFSSIA-RKDITSWGSMIDG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASCSN 290
++ D T WG+++ G + ++ A V E+E N + + A
Sbjct: 591 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 291 ANEAMSLFSEMGDREL 306
E + ++G + L
Sbjct: 651 REEVKRMREKIGKKGL 666
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 127/329 (38%), Gaps = 96/329 (29%)
Query: 320 CTSPLSLYQ-----------GMQIHSYIIKKGFYSNV-----PV---------------- 347
C SPL+L Q G IH +K F+S + PV
Sbjct: 9 CFSPLTLNQNRKENFFSSQNGCFIHKPSLKTTFFSPIFRSCIPVRISATPTRTIDHQVTD 68
Query: 348 CNAILQH--QAGELFRLFSLM-LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
NA + H Q G+L L+ + +++ + T+ V+ CA + SL G ++H I
Sbjct: 69 YNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSN 128
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFME--------------------------- 437
+ +D + L+ Y CG L R +F+ ME
Sbjct: 129 SVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF 188
Query: 438 ------------------------DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
D DV+SW+S+I GY G E L ++++M G+
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR----SCVVDLLARAGRVH 529
+ T++ VL C++ G + G ++ + I + ERR + ++D+ ++ G +
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSL-----AIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A +M + ++V W S++A G
Sbjct: 304 GALRVFEKMG-ERNVVSWTSMIAGYTRDG 331
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 203/713 (28%), Positives = 350/713 (49%), Gaps = 132/713 (18%)
Query: 42 FDDIWDFDLFSSLCKQNL----------------YNEALVAFDFLQNNTNFRIRPSTYAD 85
F+D W +F + +NL Y ++ +FL + ++ +
Sbjct: 82 FEDAWH--MFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPV 139
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR- 144
+++ C L L+LGR+VH +L + + N +++MYGKCGSL++A+ V + M Q+
Sbjct: 140 VLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKD 199
Query: 145 ----------------------------------NVVSWTAMIAGCSQNGQENAAIELYV 170
NVV+W+A+I G S N + ++EL+
Sbjct: 200 CVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFA 259
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M+ +G+ PD T S++ ACS + + +G++LH ++++ E S+ NAL+ MY +
Sbjct: 260 RMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCG 319
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLA----SWNTIIA 283
+ A+ +FS ARK S+ +MI G+ + A+ +F +ME + SWN +I+
Sbjct: 320 DMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMIS 379
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G ++A+ LF ++ + PD T+ S+L + QG +IHS I KG S
Sbjct: 380 GHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQS 439
Query: 344 NVPV----------CNAILQ--------------------------HQAGELFRLFSLML 367
N V CN I+ +Q G++ L M
Sbjct: 440 NSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMK 499
Query: 368 ASQTKPDHITFNDV-----------------------------------MGACAAMASLE 392
+ +P+ T+N + + AC+ +A++
Sbjct: 500 SDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIH 559
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G Q+H Y ++ G D + L+DMY KCGS+ +++N + +P++V ++++ YA
Sbjct: 560 RGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYA 619
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G GEE + +FRRM S VRP+HVT + VL++C H G ++ G + + +M+ Y I PT
Sbjct: 620 MHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPTL 678
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ +C+VDLL+RAG++ EA I M + D V W +LL C H V +G+ AAE +++
Sbjct: 679 KHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIE 738
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++P+N+ VLL N+YAS+G+W ++A+ M ++G++K PG SWIE + +H
Sbjct: 739 LEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVH 791
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 228/507 (44%), Gaps = 72/507 (14%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P T + S SL LG+++H H + + + +L MY S EDA +FD
Sbjct: 31 PLTSTTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFD 90
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP--DQFTFGSIIRACSGLCCV 197
+M +N+ SWTA++ G L+ + L GL D F F ++ C GL +
Sbjct: 91 KMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDL 150
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG- 256
LGRQ+H V+K +++ NALI MY K + +A V + +KD SW S+I
Sbjct: 151 ELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITAC 210
Query: 257 ------FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+ LD + PN+ +W+ +I G +S + E++ LF+ M + PD
Sbjct: 211 VANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDA 270
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELFRLFSLMLA 368
T+ S+L AC+ L+ G ++H YI++ +SN V NA+ + + G++ F +
Sbjct: 271 RTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKI--- 327
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
F+ CAA N ++ Y++ G++G
Sbjct: 328 ---------FSKFARKCAA------------------------SYNTMIVGYLENGNVGK 354
Query: 429 ARELFNFME----DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
A+ELF ME + D +SW+ +I G+ ++AL LFR + G+ P+ TL +LT
Sbjct: 355 AKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILT 414
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVHEAEDFINQMAF 540
+ + + +G +++ I I+ + S V V++ + + A QMAF
Sbjct: 415 GFADMTCIRQGKEIHSI-----AIVKGLQSNSFVGGALVEMYCKCNDIIAA-----QMAF 464
Query: 541 DD----DIVVWKSLL---ASCKTHGNV 560
D+ D W +L+ A C G +
Sbjct: 465 DEISERDTSTWNALISGYARCNQIGKI 491
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 316/626 (50%), Gaps = 85/626 (13%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
+ NL + AL F +Q N + S YA ++ +C++L L+LG ++H H L S D
Sbjct: 258 QNNLLSLALKFFKEMQK-VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG 316
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++ L+MY KC +++DA+++FD N S+ AMI G SQ A+ L+ +++ S
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
GL D+ + + RAC+ + + G Q++ IKS + NA I MY K + +A
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+ VF + R+D S WN IIA E +
Sbjct: 437 FRVFDEMRRRDAVS----------------------------WNAIIAAHEQNGKGYETL 468
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACT---------------------------SPLSLY- 327
LF M + PD T S+L ACT S + +Y
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 328 ------QGMQIHSYIIKKGFYS---------------------NVPVCNAILQHQAGELF 360
+ +IHS ++ S N + +++ Q+ +
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
LF+ M+ PD T+ V+ CA +AS +G Q+H ++K L DV++ + L+DMY
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCG L +R +F D V+W+++I GYA G GEEA++LF RM ++PNHVT +
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
+L AC+H+GL+++GL+ + +M+ +YG+ P S +VD+L ++G+V A + I +M F
Sbjct: 709 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 768
Query: 541 DDDIVVWKSLLASCKTH-GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ D V+W++LL C H NV+V + A +L++DP +S+A LL N+YA +G WE+V+
Sbjct: 769 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 828
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
L +M+ ++K PG SW+E++ ++H
Sbjct: 829 LRRNMRGFKLKKEPGCSWVELKDELH 854
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/566 (25%), Positives = 253/566 (44%), Gaps = 99/566 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A ++ CS L LG ++H ++ C D V + +L+MY K ++ VF +
Sbjct: 182 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P++N VSW+A+IAGC QN + A++ + +M + Q + S++R+C+ L + LG
Sbjct: 242 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 301
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLHAH +KS+ + I + A + MY K D + DA
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA-------------------------- 335
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+ +F+ E+ N S+N +I G + + +A+ LF + L D +++ + AC
Sbjct: 336 --QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFR--------------- 361
L +G+QI+ IK +V V NA + E FR
Sbjct: 394 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 362 ----------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
LF ML S+ +PD TF ++ AC SL G ++H I+K+G
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG 512
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFN-FMEDPDV-------------------VSWS 445
+A + V L+DMY KCG + A ++ + F + +V VSW+
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-----R 500
S+I GY E+A LF RM G+ P+ T VL C+++ G Q++ +
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 632
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+Q++ I T +VD+ ++ G +H++ + + + D V W +++ HG
Sbjct: 633 ELQSDVYICST------LVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 561 DVGKRAAENIL--KIDPTNSAALVLL 584
+ + E ++ I P + + +L
Sbjct: 686 EEAIQLFERMILENIKPNHVTFISIL 711
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 241/511 (47%), Gaps = 57/511 (11%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
DFL N N + + ++ + C+ +L+LG++ H H++ S +P + N +L +Y
Sbjct: 38 DFL-NQVN-SVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 128 CGSLEDARMVFDEMP-------------------------------QRNVVSWTAMIAGC 156
A MVFD+MP R+VVSW +M++G
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
QNG+ +IE++V M + G+ D TF I++ CS L LG Q+H V++ + +
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESP 273
++ +AL+ MY K R +++ VF I K+ SW ++I G + L A F EM+
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 274 NLASWNTIIAGV-ASCSNANE---AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY-- 327
N +I A V SC+ +E L + + DG+ VR T+ L +Y
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VR------TATLDMYAK 328
Query: 328 -QGMQIHSYIIKKGFYSNVPVCNAIL----QHQAG-ELFRLFSLMLASQTKPDHITFNDV 381
MQ + N NA++ Q + G + LF +++S D I+ + V
Sbjct: 329 CDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 388
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
ACA + L G Q++ +K+ L+LDV V N +DMY KC +L A +F+ M D
Sbjct: 389 FRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA 448
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
VSW+++I + Q G G E L LF M S + P+ T +L AC+ G + G++++
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 507
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+ G+ ++D+ ++ G + EAE
Sbjct: 508 IVKS-GMASNSSVGCSLIDMYSKCGMIEEAE 537
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 39/262 (14%)
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
F F+ L F+ V CA +LE+G Q H +++ +G FV+N L+ +
Sbjct: 33 FSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQV 92
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA--------------------------- 452
Y SA +F+ M DVVSW+ +I GY+
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 453 ----QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
Q G +++++F M G+ + T +L CS + G+Q++ I+ G
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV-RVGC 211
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
S ++D+ A+ R E+ + + + V W +++A C + + + + +
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 569 NILKIDPTNSAALVLLCNIYAS 590
+ K++ S + IYAS
Sbjct: 271 EMQKVNAGVSQS------IYAS 286
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 299/534 (55%), Gaps = 45/534 (8%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + + N++ W M+ G + + +A+E+YV+M+ G +P+ ++F ++++C+
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
GRQ+HA V+K G +LI+MY + + DA VF + + +D+ S ++I G
Sbjct: 80 FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139
Query: 257 F-SKLDF--ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ S+ DF AR VF+E+ ++ SWN +I G EA+ LF EM + PD T+
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIK----KGFYSNVPVCNAILQ--------HQAGELFR 361
S++ AC S+ G Q+HS++ GF S++ + NA++ A LF
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259
Query: 362 ----------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
LF ML S P+ +T V+ ACA + ++++
Sbjct: 260 GLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDI 319
Query: 394 GTQLHCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G +H YI K G+ + + L+DMY KCG + +A ++FN M + SW+++I G+
Sbjct: 320 GRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGF 379
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G A LF RMR + V P+ +T VG+L+ACSH GL++ G Q+++ M +Y + P
Sbjct: 380 AMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPK 439
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E C++DLL +G EAE+ I+ M + D V+W SLL +CK HGN+++ + A+ ++
Sbjct: 440 LEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLI 499
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
KI+P NS + VLL NIYA++G+WE+VAR+ G + +G++KVPG S IE+ + +H
Sbjct: 500 KIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVH 553
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 202/453 (44%), Gaps = 105/453 (23%)
Query: 80 PSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P++Y+ L+ +C+ ++ + GR++H +L C D +H +++MY + G LEDAR V
Sbjct: 62 PNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKV 121
Query: 138 FD-------------------------------EMPQRNVVSWTAMIAGCSQNGQENAAI 166
FD E+ +R+VVSW AMI G +NG+ A+
Sbjct: 122 FDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEAL 181
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV--IKSEHG--SHLISQNAL 222
EL+ +M+++ + PD+ T S++ AC+ + LGRQ+H+ V +HG S L NAL
Sbjct: 182 ELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNAL 241
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
I +Y+K + A+ +F ++ KD+ SW ++I G++ + +
Sbjct: 242 IDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYK------------------ 283
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK--- 339
EA+ LF EM P+ +T+ S+L AC ++ G IH YI KK
Sbjct: 284 ----------EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKG 333
Query: 340 ------------------------------GFYSNVPVCNAI-----LQHQAGELFRLFS 364
Y ++ NA+ + +A F LFS
Sbjct: 334 VTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFS 393
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKC 423
M ++ +PD ITF ++ AC+ L++G Q+ + + L + ++D+
Sbjct: 394 RMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHS 453
Query: 424 GSLGSARELFNFME-DPDVVSWSSLIVGYAQFG 455
G A E+ + M +PD V W SL+ + G
Sbjct: 454 GLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 173/384 (45%), Gaps = 58/384 (15%)
Query: 42 FDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD+I + D+ S + Y EAL F + TN R T ++SAC+ S
Sbjct: 153 FDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR-TNVRPDEGTLVSVVSACAQSGS 211
Query: 96 LQLGRKVHD--------HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
++LGR+VH H SS + + N ++++Y KCG +E A +F+ + ++VV
Sbjct: 212 IELGRQVHSWVDDDDDDHGFSSSLK----IVNALIDLYSKCGDVETAFGLFEGLSCKDVV 267
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +I G + A+ L+ +ML+SG P+ T S++ AC+ L + +GR +H ++
Sbjct: 268 SWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYI 327
Query: 208 IKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
K G + + +LI MY K I A VF+S+ + ++SW +MI GF
Sbjct: 328 DKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGF-------- 379
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
A AN A LFS M + PD +T LL AC+
Sbjct: 380 --------------------AMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGL 419
Query: 326 LYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQT-KPDHITFN 379
L G QI + + Y+ P C L +G LF+ M+ + +PD + +
Sbjct: 420 LDLGRQIFKSMTQD--YNLTPKLEHYGCMIDLLGHSG-LFKEAEEMIHTMPMEPDGVIWC 476
Query: 380 DVMGACAAMASLEMGTQLHCYIMK 403
++ AC +LE+ ++K
Sbjct: 477 SLLKACKKHGNLELAESFAQKLIK 500
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 169/406 (41%), Gaps = 77/406 (18%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +VF ++ PNL WNT++ G AS S+ A+ ++ M +P+ + L
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70
Query: 317 LCACTSPLSLYQGMQIHSYIIKKG-------------------------------FYSNV 345
L +C + +G QIH+ ++K G + +V
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 346 PVCNAILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
C A++ A FR + T+ D +++N ++ E +L +M+T
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 405 GLALD---------------------------------------VFVMNGLMDMYVKCGS 425
+ D + ++N L+D+Y KCG
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ +A LF + DVVSW++LI GY +EAL LF+ M SG PN VTL+ VL A
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310
Query: 486 CSHVGLVEEGLQLYRIMQNEY-GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
C+H+G ++ G ++ + + G+ R+ ++D+ A+ G + A N M + +
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY-RSL 369
Query: 545 VVWKSLLASCKTHGNV----DVGKRAAENILKIDPTNSAALVLLCN 586
W +++ HG D+ R N ++ D L+ C+
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACS 415
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L A +F +++P+++ W++++ G+A AL+++ RM S G PN + +L +
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 486 CSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
C+ EEG Q++ ++++ G+ R + ++ + AR G + +A + + D+
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGL--DRYVHTSLISMYARNGGLEDARKVFDASSH-RDV 130
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
V +L+ + G+ ++ + I + D + A++ Y +G++EE L M
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMI---TGYVENGRYEEALELFKEM 187
Query: 605 KERGVRKVPG 614
VR G
Sbjct: 188 MRTNVRPDEG 197
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V +S L R W+ +F ++ A AFD R+
Sbjct: 346 DMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGF----AMHGRANAAFDLFSRMRGNRVE 401
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARM 136
P T+ L+SACS L LGR++ + P + ++++ G G ++A
Sbjct: 402 PDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEE 461
Query: 137 VFDEMP-QRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+ MP + + V W +++ C ++G A E + Q L
Sbjct: 462 MIHTMPMEPDGVIWCSLLKACKKHGNLELA-ESFAQKL 498
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 316/626 (50%), Gaps = 85/626 (13%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
+ NL + AL F +Q N + S YA ++ +C++L L+LG ++H H L S D
Sbjct: 216 QNNLLSLALKFFKEMQK-VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG 274
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++ L+MY KC +++DA+++FD N S+ AMI G SQ A+ L+ +++ S
Sbjct: 275 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 334
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
GL D+ + + RAC+ + + G Q++ IKS + NA I MY K + +A
Sbjct: 335 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 394
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+ VF + R+D S WN IIA E +
Sbjct: 395 FRVFDEMRRRDAVS----------------------------WNAIIAAHEQNGKGYETL 426
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACT---------------------------SPLSLY- 327
LF M + PD T S+L ACT S + +Y
Sbjct: 427 FLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 486
Query: 328 ------QGMQIHSYIIKKGFYS---------------------NVPVCNAILQHQAGELF 360
+ +IHS ++ S N + +++ Q+ +
Sbjct: 487 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
LF+ M+ PD T+ V+ CA +AS +G Q+H ++K L DV++ + L+DMY
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 606
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCG L +R +F D V+W+++I GYA G GEEA++LF RM ++PNHVT +
Sbjct: 607 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 666
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
+L AC+H+GL+++GL+ + +M+ +YG+ P S +VD+L ++G+V A + I +M F
Sbjct: 667 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 726
Query: 541 DDDIVVWKSLLASCKTH-GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ D V+W++LL C H NV+V + A +L++DP +S+A LL N+YA +G WE+V+
Sbjct: 727 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 786
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
L +M+ ++K PG SW+E++ ++H
Sbjct: 787 LRRNMRGFKLKKEPGCSWVELKDELH 812
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 242/539 (44%), Gaps = 97/539 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A ++ CS L LG ++H ++ C D V + +L+MY K ++ VF +
Sbjct: 140 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P++N VSW+A+IAGC QN + A++ + +M + Q + S++R+C+ L + LG
Sbjct: 200 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 259
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLHAH +KS+ + I + A + MY K D + DA
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA-------------------------- 293
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+ +F+ E+ N S+N +I G + + +A+ LF + L D +++ + AC
Sbjct: 294 --QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 351
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFR--------------- 361
L +G+QI+ IK +V V NA + E FR
Sbjct: 352 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 411
Query: 362 ----------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
LF ML S+ +PD TF ++ AC SL G ++H I+K+G
Sbjct: 412 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG 470
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFN-FMEDPDV-------------------VSWS 445
+A + V L+DMY KCG + A ++ + F + +V VSW+
Sbjct: 471 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 530
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-----R 500
S+I GY E+A LF RM G+ P+ T VL C+++ G Q++ +
Sbjct: 531 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 590
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+Q++ I T +VD+ ++ G +H++ + + + D V W +++ HG
Sbjct: 591 ELQSDVYICST------LVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGK 642
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 231/489 (47%), Gaps = 55/489 (11%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP------- 142
C+ +L+LG++ H H++ S +P + N +L +Y A MVFD+MP
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 143 ------------------------QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
R+VVSW +M++G QNG+ +IE++V M + G+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
D TF I++ CS L LG Q+H V++ + +++ +AL+ MY K R +++ V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 239 FSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGV-ASCSNANE- 293
F I K+ SW ++I G + L A F EM+ N +I A V SC+ +E
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 294 --AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY---QGMQIHSYIIKKGFYSNVPVC 348
L + + DG+ VR T+ L +Y MQ + N
Sbjct: 256 RLGGQLHAHALKSDFAADGI-VR------TATLDMYAKCDNMQDAQILFDNSENLNRQSY 308
Query: 349 NAIL----QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
NA++ Q + G + LF +++S D I+ + V ACA + L G Q++ +K
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+ L+LDV V N +DMY KC +L A +F+ M D VSW+++I + Q G G E L L
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M S + P+ T +L AC+ G + G++++ + G+ ++D+ +
Sbjct: 429 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYS 486
Query: 524 RAGRVHEAE 532
+ G + EAE
Sbjct: 487 KCGMIEEAE 495
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 313/593 (52%), Gaps = 74/593 (12%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKV 102
+W+ + +L L++EAL + Q R++P TY +I+AC+ L ++ + +
Sbjct: 82 LWN-SIIRALTHNGLFSEALSLYSETQR---IRLQPDTYTFPSVINACAGLLDFEMAKSI 137
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
HD +L D + N +++MY + L+ AR VF+EMP R+VVSW ++I+G + NG
Sbjct: 138 HDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYW 197
Query: 163 NAAIELYVQMLQ------SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
N A+E+Y Q ++ + PD T SI++AC L + G+ +H ++I S +
Sbjct: 198 NEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDT 257
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+ N LI MY K +L + VFS + KD S
Sbjct: 258 TASNILINMYAKCGNLLASQEVFSGMKCKDSVS--------------------------- 290
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
WN++I +++ +F M R++I T +++ +C +HS
Sbjct: 291 -WNSMINVYIQNGKMGDSLKVFENMKARDII----TWNTIIASC-----------VHS-- 332
Query: 337 IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
CN L R+ S M PD T ++ C+ +A+ G +
Sbjct: 333 ---------EDCNLGL--------RMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 375
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H I K GL DV V N L++MY KCGSL ++ ++F M+ DVV+W++LI +G
Sbjct: 376 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 435
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G++A++ F M ++G+ P+HV V ++ ACSH GLVEEGL + M+ +Y I P E +
Sbjct: 436 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYA 495
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
CVVDLL+R+ + +AEDFI M D +W +LL++C+ G+ ++ +R +E I++++P
Sbjct: 496 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPD 555
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGN 629
++ VL+ NIYA+ GKW++V + S+K RG++K PG SW+EIQ K++ G
Sbjct: 556 DTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGT 608
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 199/485 (41%), Gaps = 76/485 (15%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFD-----FLQNNTNFRIRPST 82
LD+A +V + R W+ L S +NEAL + F++ F+ T
Sbjct: 166 LDKARKVFEEMPLRDVVSWN-SLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLT 224
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL----------- 131
++ AC L L+ G+ VHD++++S + D N ++NMY KCG+L
Sbjct: 225 ITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMK 284
Query: 132 --------------------EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
D+ VF+ M R++++W +IA C + N + + +
Sbjct: 285 CKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISR 344
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ PD T SI+ CS L G+++H + K S + N LI MY+K
Sbjct: 345 MRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGS 404
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ +++ VF + KD+ +W ++I A ++ E
Sbjct: 405 LRNSFQVFKLMKTKDVVTWTALIS-------ACGMYGE---------------------G 436
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV---- 347
+A+ F EM ++PD + +++ AC+ + +G+ + + +KK + +
Sbjct: 437 KKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYA 495
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK---- 403
C L ++ L + +L+ KPD + ++ AC E+ ++ I++
Sbjct: 496 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPD 555
Query: 404 -TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
TG + V + + + + S+ + + +DP SW + FG G + +
Sbjct: 556 DTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPG-CSWMEIQNKVYVFGTGTKFFE 614
Query: 463 LFRRM 467
F +
Sbjct: 615 QFEEV 619
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 314/597 (52%), Gaps = 42/597 (7%)
Query: 42 FDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL------ISACSSLRS 95
FD + D+ S N Y A +F+ L + P+ D + AC +
Sbjct: 43 FDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACGQSSN 102
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+ G +H + + + ++LNMY + G ++ +F EM RN V+WTA+++G
Sbjct: 103 IGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSG 162
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+ G+ + + +M +S + D F F + ++AC+ L V G+++H HVI +
Sbjct: 163 MVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIVRGSDAS 222
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMES 272
L N+LI MYT+ + D ++F S++ +D+ SW ++ID +S++ + A F ++E
Sbjct: 223 LCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVATFLKIEI 282
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ- 331
S T S S +N M ++S G + S L+QGM+
Sbjct: 283 FRRTSQWTYFCLGDSLSVSNSMMKMYSTCGKLD----------------SASVLFQGMRR 326
Query: 332 --IHSYIIKKGFYSNVPVCNAILQHQAG---ELFRLFSLMLASQTKPDHITFNDVMGACA 386
I ++ G YS QAG E+F FS M + KP ++
Sbjct: 327 RDIITWSTIIGGYS-----------QAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSG 375
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
MA LE G Q+H + GL + + + L++MY KCGS+ A ++F + D+VS ++
Sbjct: 376 TMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIVSLTA 435
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I GYA+ G +EA+ LF + G+RP+ VT + VLTACSH G ++ G + + +MQ+EY
Sbjct: 436 MINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLMQDEY 495
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
I P +E C+VDLL RAGR+ +AE IN+M + D VVW +LL +CK G+ + G+RA
Sbjct: 496 NIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGDTERGRRA 555
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
AE IL++DPT+ A V L NIY+S+GK EE A + +MK +GV KVPG S I+I +
Sbjct: 556 AERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVPGWSSIKIMDR 612
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 212/469 (45%), Gaps = 47/469 (10%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACS 192
AR +FD+MP R++VSWTA+I G A+ L+ +L + PD ++AC
Sbjct: 39 ARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACG 98
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+G G LHA+ K+ + + L+ MY + +I +F+
Sbjct: 99 QSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFT------------ 146
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
EM+ N +W I++G+ E ++ FSEM + + D
Sbjct: 147 ----------------EMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFA 190
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQ 370
+ L AC + G +IH+++I +G +++ V N+++ + GE+ L S
Sbjct: 191 FATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHL-FESM 249
Query: 371 TKPDHITFNDVMGACAAMASLE--MGTQLHCYIMKTGLALDVF-------VMNGLMDMYV 421
++ D ++ ++ A + M E + T L I + F V N +M MY
Sbjct: 250 SERDVFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLGDSLSVSNSMMKMYS 309
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
CG L SA LF M D+++WS++I GY+Q G GEE F MR +G +P L
Sbjct: 310 TCGKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALAS 369
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+L+ + ++E+G Q++ + G+ RS ++++ ++ G + EA +
Sbjct: 370 LLSVSGTMAVLEQGRQVHALALY-LGLEQNSTIRSALINMYSKCGSIEEASKIFEETD-T 427
Query: 542 DDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCN 586
DDIV +++ HGN +D+ +++ + L+ D +++ C+
Sbjct: 428 DDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACS 476
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 94/244 (38%), Gaps = 47/244 (19%)
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
A + ++ ++ V+ + G+AR LF+ M D+VSW+++I GY EAL LF
Sbjct: 17 AASISLLEKPVEKIVRISNQGAARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSA 76
Query: 467 MR-SSGVRPNHVTLVGVLTACSH-----------------------------------VG 490
+ V P+ L L AC G
Sbjct: 77 LLFDPAVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTG 136
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA----FDDDIVV 546
+++G +++ MQ + T +V + AGR E + ++M+ DD
Sbjct: 137 KIDKGCRIFTEMQFRNTVTWT-----AIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDF-A 190
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVARLMGSMK 605
+ + L +C V GK +++ S +V L N+Y G+ + L SM
Sbjct: 191 FATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMS 250
Query: 606 ERGV 609
ER V
Sbjct: 251 ERDV 254
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 298/557 (53%), Gaps = 46/557 (8%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ AC+ L SL+LG+++H + + D + N +LNMY GSLE + +F+ +P R+
Sbjct: 269 VQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 328
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL-GRQLHA 205
W +MI+ + G A++L+++M G+ D+ T ++ C L L G+ LHA
Sbjct: 329 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHA 388
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
HVIKS NAL++MYT+ N S+ +
Sbjct: 389 HVIKSGMRIDASLGNALLSMYTEL-------NCVESVQK--------------------- 420
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+F+ M+ ++ SWNT+I +A + +A LF M + E+ P+ T+ S+L AC
Sbjct: 421 IFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTC 480
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL--------QHQAGELFR------LFSL-MLASQ 370
L G IH Y++K N P+ A+ + A +LF L S + +
Sbjct: 481 LDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXK 540
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG--LALDVFVMNGLMDMYVKCGSLGS 428
+P+ +T +V+ + +A+L G LH Y+ + G L LD+ + N + MY +CGSL S
Sbjct: 541 AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQS 600
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A +F + +++SW+++I GY G G +A+ F +M G RPN VT V VL+ACSH
Sbjct: 601 AENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSH 660
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
G +E GLQL+ M ++ + P SC+VDLLAR G + EA +FI+ M + D VW+
Sbjct: 661 SGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWR 720
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL+SC+ + + K E + K++P N+ VLL N+YA++G W EV R+ +KE+G
Sbjct: 721 ALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKG 780
Query: 609 VRKVPGQSWIEIQTKIH 625
+RK PG SWI ++ ++H
Sbjct: 781 LRKPPGISWIIVKNQVH 797
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 241/529 (45%), Gaps = 82/529 (15%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L NNT + ++ AC++ +++ G+ +H I + D + +++ Y KCG
Sbjct: 57 LPNNTTLPL-------VLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCG 109
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
+EDAR VFD M R+VV W AM+ G G A+ L +M + L P+ T +++
Sbjct: 110 FVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLL 169
Query: 190 ACSGLCCVGLGRQLHAHVIKS---EHGSHLISQNALIAMYTKFD-RILDAWNVFSSIARK 245
AC G + LGR +H + +++ + H+ + ALI Y +FD R+L +F + +
Sbjct: 170 ACEGASELRLGRGVHGYCLRNGMFDSNPHVAT--ALIGFYLRFDMRVLPL--LFDLMVVR 225
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+I SW +MI G+ + + +A+ LF +M E
Sbjct: 226 NIVSWNAMISGYYDV----------------------------GDYFKALELFVQMLVDE 257
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----------H 354
+ D +T+ + AC SL G QIH IK F ++ + NA+L H
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 317
Query: 355 QA-------------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
Q E LF M + K D T ++ C +A
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 377
Query: 390 S-LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
S L G LH +++K+G+ +D + N L+ MY + + S +++F+ M+ D++SW+++I
Sbjct: 378 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 437
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
+ A+ +A +LF RMR S ++PN T++ +L AC V ++ G ++ + ++ I
Sbjct: 438 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM-KHSI 496
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ R+ + D+ G A D D D++ W +++ + +
Sbjct: 497 EINQPLRTALADMYMNCGDEATARDLFEGCP-DRDLISWNAMIXKAEPN 544
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 140/578 (24%), Positives = 241/578 (41%), Gaps = 92/578 (15%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A V D+ R +W+ ++ + Y EA++ + N R
Sbjct: 103 DFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYV-GWGCYEEAMLLVREM-GRENLRPN 160
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVF 138
T L+ AC L+LGR VH + L + + + ++ Y + + ++F
Sbjct: 161 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLF 219
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D M RN+VSW AMI+G G A+EL+VQML + D T ++AC+ L +
Sbjct: 220 DLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLK 279
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG+Q+H IK E L NAL+ MY+ + + +F S+ +D W SMI +
Sbjct: 280 LGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAY- 338
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
A+ EAM LF M + D TV +L
Sbjct: 339 ---------------------------AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLS 371
Query: 319 ACTSPLS-LYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF--------- 360
C S L +G +H+++IK G + + NA+L ++F
Sbjct: 372 MCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDII 431
Query: 361 -------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
LF M S+ KP+ T ++ AC + L+ G +H Y+
Sbjct: 432 SWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYV 491
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
MK + ++ + L DMY+ CG +AR+LF D D++SW+++I
Sbjct: 492 MKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI------------- 538
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVD 520
PN VT++ VL++ +H+ + +G L+ + + + + + +
Sbjct: 539 --------XKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFIT 590
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ AR G + AE+ + +I+ W +++A +G
Sbjct: 591 MYARCGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNG 627
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 170/378 (44%), Gaps = 64/378 (16%)
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W ++I + + A + Y QM G++P+ T +++AC+ V G+ +H +
Sbjct: 28 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
++ + A++ Y K + DA VF +++ +D+ W +M+ G+
Sbjct: 88 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGY----------- 136
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
W EAM L EMG L P+ T+ +LL AC L
Sbjct: 137 -------VGWGCY----------EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRL 179
Query: 329 GMQIHSYIIKKG-FYSNVPVCNAIL--------------------------------QHQ 355
G +H Y ++ G F SN V A++ +
Sbjct: 180 GRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYD 239
Query: 356 AGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
G+ F+ LF ML + K D +T + ACA + SL++G Q+H +K D+++
Sbjct: 240 VGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYI 299
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
+N L++MY GSL S+ +LF + + D W+S+I YA FGC EEA+ LF RM+S GV
Sbjct: 300 LNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGV 359
Query: 473 RPNHVTLVGVLTACSHVG 490
+ + T+V +L+ C +
Sbjct: 360 KKDERTVVIMLSMCEELA 377
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 349 NAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
N++++HQA + ++ M + P++ T V+ ACAA ++E G +H I
Sbjct: 29 NSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQG 88
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
T L DV V ++D Y KCG + AR +F+ M D DVV W++++ GY +GC EEA+ L
Sbjct: 89 TDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLL 148
Query: 464 FRRMRSSGVRPNHVTLVGVLTACS-------------------------HVGLVEEGLQL 498
R M +RPN T+V +L AC HV G L
Sbjct: 149 VREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYL 208
Query: 499 ---YRIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFDD---DIVVWKSL 550
R++ + ++ R S ++ G +A + QM D+ D V
Sbjct: 209 RFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVA 268
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVARLMGSMKER 607
+ +C G++ +GK+ + +K + ++ L N+Y+++G E +L S+ R
Sbjct: 269 VQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 326
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
++DP W+S+I A + L + +M S GV PN+ TL VL AC+ VE G
Sbjct: 22 IKDPK--HWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERG 79
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA--- 552
++R +Q ++ + VVD + G V +A + M+ D D+V+W +++
Sbjct: 80 KSIHRSIQGT-DLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS-DRDVVLWNAMVYGYV 137
Query: 553 --SCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
C + V + EN L+ + AL+L C
Sbjct: 138 GWGCYEEAMLLVREMGREN-LRPNSRTMVALLLAC 171
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 206/685 (30%), Positives = 339/685 (49%), Gaps = 92/685 (13%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNN----TNFRIRPSTY 83
LD A ++D R W+ + ++L + EAL ++ + T+F T
Sbjct: 90 LDAARALLDEMPDRNVVSWN-TVIAALARSERAGEALELYEGMLREGLVPTHF-----TL 143
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A ++SAC ++ +L GR+ H + + + N +L MY KCG +EDA +FD M
Sbjct: 144 ASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMAS 203
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC------- 196
N VS+TAM+ G Q G + A+ L+ +M +SG+ D S++ +C+ C
Sbjct: 204 PNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVR 263
Query: 197 -VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
LG+ +HA +++ GS N+LI MYTK ++ +A VF S+ SW +I
Sbjct: 264 AFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILIT 323
Query: 256 GFSKLDF--------------------------------------ARTVFNEMESPNLAS 277
GF + AR +F+++ P++ +
Sbjct: 324 GFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTT 383
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
WNT+++G + + LF M + + PD T+ +L +C+ L G Q+HS +
Sbjct: 384 WNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASV 443
Query: 338 KKGFYSNVPVCNAILQ-----HQAG-------------------------------ELFR 361
+ ++++ V + ++ Q G E F
Sbjct: 444 RFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFD 503
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F M + P ++ ++ +CA ++S+ G Q+H I+K G +V+V + L+DMY
Sbjct: 504 FFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYA 563
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG++ AR F+ M ++V+W+ +I GYAQ G GE+A+ LF M ++ RP+ VT +
Sbjct: 564 KCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIA 623
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VLT CSH GLV+E + + M++ YGI P E +C++D L RAGR+ E E I+ M
Sbjct: 624 VLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCK 683
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
DD +VW+ LLA+C H N ++G+ AA+++ ++DP N + VLL NIYAS G+ + + +
Sbjct: 684 DDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVR 743
Query: 602 GSMKERGVRKVPGQSWIEIQTKIHA 626
M RGV K G SWI+ + +HA
Sbjct: 744 ALMSSRGVVKGRGYSWIDHKDGVHA 768
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 230/464 (49%), Gaps = 57/464 (12%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P+A +N L+ + G L+ AR + DEMP RNVVSW +IA +++ + A+ELY
Sbjct: 71 RPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEG 130
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
ML+ GL+P FT S++ AC + + GR+ H +K +L +NAL+ MYTK
Sbjct: 131 MLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGG 190
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ DA +F DG M SPN S+ ++ G+ +
Sbjct: 191 VEDAVRLF---------------DG-------------MASPNEVSFTAMMGGLVQAGSV 222
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLC----ACTSPLSLYQ----GMQIHSYIIKKGFYS 343
++A+ LF+ M + D + V S+L AC S + + G IH+ I++KGF S
Sbjct: 223 DDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGS 282
Query: 344 NVPVCNAILQ-----HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+ V N+++ Q E ++F + T +++N ++ S ++
Sbjct: 283 DQHVGNSLIDMYTKCMQMDEAVKVFDSLPNIST----VSWNILITGFGQAGSYAKALEVL 338
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+ ++G + + ++ +K + SAR +F+ + P V +W++L+ GY Q +
Sbjct: 339 NLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQ 398
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-----IMQNEYGIIPTRE 513
+ ++LFRRM+ V+P+ TL +L++CS +G+++ G Q++ ++ N+ +
Sbjct: 399 DTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVA---- 454
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
S +VD+ ++ G++ A N+M + D+V W S+++ H
Sbjct: 455 --SGLVDMYSKCGQIGIARIIFNRMT-ERDVVCWNSMISGLAIH 495
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 185/446 (41%), Gaps = 103/446 (23%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + CM +D+A +V DS W+ L + + Y +AL + ++ + +
Sbjct: 292 DMYTKCMQMDEAVKVFDSLPNISTVSWNI-LITGFGQAGSYAKALEVLNLMEESGS-EPN 349
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHI-----------LSSKC----------------- 111
TY++++++C R + R + D I LS C
Sbjct: 350 EVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQH 409
Query: 112 ---QPDA-----------------------------VLHNH------ILNMYGKCGSLED 133
QPD +LHN +++MY KCG +
Sbjct: 410 QNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGI 469
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
AR++F+ M +R+VV W +MI+G + + A + + QM +G+MP + ++ S+I +C+
Sbjct: 470 ARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCAR 529
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L V GRQ+HA ++K + ++ +ALI MY K + DA F + K+I +W M
Sbjct: 530 LSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEM 589
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
I G+++ F +A+ LF M E PDG+T
Sbjct: 590 IHGYAQNGFGE----------------------------KAVDLFEYMLTTEQRPDGVTF 621
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLA 368
++L C+ + + + + + + Y P+ C +AG L + +L+
Sbjct: 622 IAVLTGCSHSGLVDEAIAFFNSM--ESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDN 679
Query: 369 SQTKPDHITFNDVMGACAAMASLEMG 394
K D I + ++ ACA + E+G
Sbjct: 680 MPCKDDPIVWEVLLAACAVHHNAELG 705
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 37/220 (16%)
Query: 401 IMKTGLALDVFVMNGLMDMYV-------------------------------KCGSLGSA 429
++ GL D F++N L+++Y + G L +A
Sbjct: 34 VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
R L + M D +VVSW+++I A+ EAL+L+ M G+ P H TL VL+AC V
Sbjct: 94 RALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAV 153
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
+++G + + + + G+ + ++ + + G V +A + MA ++ V + +
Sbjct: 154 AALDDGRRCHGLAV-KVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNE-VSFTA 211
Query: 550 LLASCKTHGNVD----VGKRAAENILKIDPTNSAALVLLC 585
++ G+VD + R + +++DP ++++ C
Sbjct: 212 MMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSC 251
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 198/609 (32%), Positives = 309/609 (50%), Gaps = 66/609 (10%)
Query: 55 CKQN-LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
C QN Y L F +Q + YA + +C+++ L R++H H + +K
Sbjct: 212 CVQNEQYTRGLELFVQMQR-LGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSA 270
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D V+ I+++Y K SL DAR F +P V + AM+ G + G A++L+ M
Sbjct: 271 DRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMT 330
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+SG+ D + + AC+ + G Q+H IKS + +NA++ +Y K ++
Sbjct: 331 RSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALV 390
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+A+ VF EME + SWN IIA + +
Sbjct: 391 EAY----------------------------LVFQEMEQRDSVSWNAIIAALEQNECYED 422
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-----FYSNVPV- 347
++ +EM + PD T S+L AC SL G +H IK G F S+ V
Sbjct: 423 TIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVD 482
Query: 348 ----CNAI--------------------------LQHQAGELFRLFSLMLASQTKPDHIT 377
C I L Q+ E + FS ML KPDH T
Sbjct: 483 MYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFT 542
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ V+ CA +A++E+G Q+H I+K + D ++ + L+DMY KCG++ + +F +
Sbjct: 543 YATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQ 602
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D VSW+++I GYA G G EAL++F RM+ + V PNH T V VL ACSHVGL+++G +
Sbjct: 603 KLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCR 662
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ +M + Y + P E +C+VD+L R+ EA FI M + D V+WK+LL+ CK
Sbjct: 663 YFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIR 722
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
+V+V + AA N+L++DP +S+ +LL N+YA SGKW +V+R M++ ++K PG SW
Sbjct: 723 QDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSW 782
Query: 618 IEIQTKIHA 626
IE+Q+++H
Sbjct: 783 IEVQSEMHG 791
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 260/547 (47%), Gaps = 69/547 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S C++ ++ ++ V +T A L+ AC L L LG ++H + +
Sbjct: 107 LLSGYCQRGMFRDS-VGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKT 165
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + +++MYGKC SLEDA F M +RN VSW A IAGC QN Q +EL+
Sbjct: 166 GLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELF 225
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
VQM + GL Q + S+ R+C+ + C+ RQLHAH IK++ + + A++ +Y K
Sbjct: 226 VQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKA 285
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
D ++D AR F + + + + N ++ G+
Sbjct: 286 DSLVD----------------------------ARRAFFSLPNHTVQACNAMMVGLVRTG 317
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
EA+ LF M + D +++ + AC QG+Q+H IK GF +V V N
Sbjct: 318 LGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN 377
Query: 350 AILQHQAG-----ELFRLF-------------------------------SLMLASQTKP 373
AIL E + +F + ML +P
Sbjct: 378 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEP 437
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D T+ V+ ACA + SLE G+ +H +K+GL LD FV + ++DMY KCG + A++L
Sbjct: 438 DDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLH 497
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ + ++VSW+S+I G++ EEA K F M GV+P+H T VL C+++ +E
Sbjct: 498 DRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIE 557
Query: 494 EGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G Q++ +I++ E ++ S +VD+ A+ G + ++ + + A D V W +++
Sbjct: 558 LGKQIHGQIIKQE--MLGDEYISSTLVDMYAKCGNMPDSL-LMFEKAQKLDFVSWNAMIC 614
Query: 553 SCKTHGN 559
HG
Sbjct: 615 GYALHGQ 621
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 236/522 (45%), Gaps = 61/522 (11%)
Query: 81 STYADLISACSSL--RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+T++ L C+ +L G+ H +L S P + N +L MY +CG AR VF
Sbjct: 3 ATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF 62
Query: 139 DEMPQRN-------------------------------VVSWTAMIAGCSQNGQENAAIE 167
D MP R+ VVSW A+++G Q G ++
Sbjct: 63 DVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVG 122
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L V+M + G+ PD+ T +++AC GL + LG Q+HA +K+ + + +AL+ MY
Sbjct: 123 LSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYG 182
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDG-FSKLDFAR--TVFNEMESPNLA----SWNT 280
K + DA F + ++ SWG+ I G + R +F +M+ L ++ +
Sbjct: 183 KCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+ A+ + + A L + + D + +++ SL ++
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDA--------RRA 294
Query: 341 FYS----NVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
F+S V CNA++ E +LF M S D ++ + V ACA +
Sbjct: 295 FFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGY 354
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G Q+HC +K+G +DV V N ++D+Y KC +L A +F ME D VSW+++I
Sbjct: 355 LQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAAL 414
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIP 510
Q C E+ + M G+ P+ T VL AC+ + +E G ++ + +++ G+
Sbjct: 415 EQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDA 474
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S VVD+ + G + EA+ +++ ++V W S+++
Sbjct: 475 FVS--STVVDMYCKCGMITEAQKLHDRIG-GQELVSWNSIIS 513
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 317/626 (50%), Gaps = 85/626 (13%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
+ NL + AL F +Q N + S YA ++ +C++L L+LG ++H H L S D
Sbjct: 216 QNNLLSLALKFFKEMQK-VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG 274
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++ L+MY KC +++DA+++FD+ N S+ AMI G SQ A+ L+ +++ S
Sbjct: 275 IVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 334
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
GL D+ + + RAC+ + + G Q++ IKS + NA I MY K + +A
Sbjct: 335 GLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEA 394
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+ VF + R+D S WN IIA E +
Sbjct: 395 FRVFDEMRRRDAVS----------------------------WNAIIAAHEQNGKGYETL 426
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACT---------------------------SPLSLY- 327
LF M + PD T S+L ACT S + +Y
Sbjct: 427 FLFVSMLRSRIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 486
Query: 328 ------QGMQIHSYIIKKGFYS---------------------NVPVCNAILQHQAGELF 360
+ +IHS ++ S N + +++ Q+ +
Sbjct: 487 KCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
LF+ M+ PD T+ V+ CA +AS +G Q+H ++K L DV++ + L+DMY
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMY 606
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCG L +R +F D V+W+++I GYA G GEEA++LF RM ++PNHVT +
Sbjct: 607 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 666
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
+L AC+H+GL+++GL+ + +M+ +YG+ P S +VD+L ++G+V A + I +M F
Sbjct: 667 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 726
Query: 541 DDDIVVWKSLLASCKTH-GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ D V+W++LL C H NV+V + A +L++DP +S+A LL N+YA +G WE+V+
Sbjct: 727 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 786
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
L +M+ ++K PG SW+E++ ++H
Sbjct: 787 LRRNMRGFKLKKEPGCSWVELKDELH 812
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 249/552 (45%), Gaps = 91/552 (16%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
V D + T F R T+A ++ CS L LG ++H ++ C D V + +L+M
Sbjct: 125 VFVDMGRAGTEFDGR--TFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDM 182
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y K ++ VF +P++N VSW+A+IAGC QN + A++ + +M + Q +
Sbjct: 183 YAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 242
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
S++R+C+ L + LG QLHAH +KS+ + I + A + MY K D + DA
Sbjct: 243 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA--------- 293
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+ +F++ E+ N S+N +I G + + +A+ LF +
Sbjct: 294 -------------------QILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 334
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGEL 359
L D +++ + AC L +G+QI+ IK +V V NA + E
Sbjct: 335 GLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEA 394
Query: 360 FR-------------------------------LFSLMLASQTKPDHITFNDVMGACAAM 388
FR LF ML S+ +PD TF V+ AC
Sbjct: 395 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG- 453
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN-FMEDPDV------ 441
SL G ++H I+K+G+A + V L+DMY KCG + A ++ + F + +V
Sbjct: 454 GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEE 513
Query: 442 -------------VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
VSW+S+I GY E+A LF RM G+ P+ T VL C++
Sbjct: 514 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 573
Query: 489 VGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+ G Q++ ++++ E + S +VD+ ++ G +H++ + + + D V W
Sbjct: 574 LASAGLGKQIHAQVIKKE--LQSDVYISSTLVDMYSKCGDLHDSR-LMFEKSLRRDFVTW 630
Query: 548 KSLLASCKTHGN 559
+++ HG
Sbjct: 631 NAMICGYAHHGK 642
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 233/489 (47%), Gaps = 55/489 (11%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQP-------------------------------DAVLH 118
C+ +L+LG++ H H++ S +P D V
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N ++N Y K ++ A F+ MP R+VVSW +M++G QNG+ +IE++V M ++G
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
D TF I++ CS L LG Q+H V++ + +++ +AL+ MY K R +++ V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 239 FSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGV-ASCSNANE- 293
F I K+ SW ++I G + L A F EM+ N +I A V SC+ +E
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 294 --AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY---QGMQIHSYIIKKGFYSNVPVC 348
L + + DG+ VR T+ L +Y MQ + K N
Sbjct: 256 RLGGQLHAHALKSDFAADGI-VR------TATLDMYAKCDNMQDAQILFDKSENLNRQSY 308
Query: 349 NAIL----QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
NA++ Q + G + LF +++S D I+ + V ACA + L G Q++ +K
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIK 368
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+ L+LDV V N +DMY KC +L A +F+ M D VSW+++I + Q G G E L L
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M S + P+ T VL AC+ G + G++++ + G+ ++D+ +
Sbjct: 429 FVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYS 486
Query: 524 RAGRVHEAE 532
+ G + EAE
Sbjct: 487 KCGMIEEAE 495
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 330/650 (50%), Gaps = 80/650 (12%)
Query: 32 GEVVDSFLRRFDDIWD-FDLFSSLCKQNLYNEALVA-----FDFLQNNTNFR-------I 78
G + S L RF +IW + +F+ + ++++++ ++ FL+ + +
Sbjct: 134 GNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 79 RPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP Y ++ C + ++GR+VH H+L + + N ++ MY KCG + AR
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD M + +SW AMIAG +N + A +EL++ ML++ + P+ T S+ A L
Sbjct: 254 VFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
VG +++H +K + N+LI MYT R+ DA +FS
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFS---------------- 357
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
ME+ + SW +I+G ++A+ +++ M + PD +T+ S
Sbjct: 358 ------------RMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASA 405
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L AC L G+++H KGF V V NA+L+
Sbjct: 406 LAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDV 465
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
H++ E F ML KP+ +TF + ACAA +L G ++H Y
Sbjct: 466 VSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAY 524
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+++ G+ + +V N L+D+YVKCG A F+ + DVVSW+ ++ G+ G G+ A
Sbjct: 525 VLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIA 584
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L LF +M G P+ VT V +L ACS G+V +G +L+ +M ++ I+P + +C+VD
Sbjct: 585 LSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVD 644
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL+R G++ EA + IN+M D VW +LL C+ H +V++G+ AA+ IL+++P + A
Sbjct: 645 LLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAY 704
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
VLLC++Y +GKW +VAR+ +M+E+G+ + G SW+E++ HA D
Sbjct: 705 HVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTD 754
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 240/546 (43%), Gaps = 77/546 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y L C R++ G + + L N +L+M + G + A VF +M
Sbjct: 98 AYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKM 157
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+V SW M+ G + G A++LY +ML +G+ PD +TF ++R C G+ +GR
Sbjct: 158 PERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGR 217
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++HAHV++ G + NAL+ MY K I+ A VF +A D SW
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISW----------- 266
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N +IAG + LF M + E+ P+ +T+ S+ A
Sbjct: 267 -----------------NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELF------------- 360
+ ++H + +K+GF +V CN+++Q AG++F
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369
Query: 361 ---------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+++LM PD +T + ACA + L++G +LH G
Sbjct: 370 MISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
V V N L++MY K + A E+F FM + DVVSWSS+I G+ EAL FR
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFR 489
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGIIPTRERRSCVVDL 521
M V+PN VT + L+AC+ G + G +++ R G +P + ++DL
Sbjct: 490 YMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDL 543
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI--DPTNSA 579
+ G+ A + + + D+V W +L+ HG D+ ++++ P
Sbjct: 544 YVKCGQTSYAWAQFSVHS-EKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602
Query: 580 ALVLLC 585
+ LLC
Sbjct: 603 FVALLC 608
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 188/417 (45%), Gaps = 69/417 (16%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH-LISQNALIAMYTKFDRILDAWN 237
PD+ + ++ R C V G + A +EH S L NA+++M +F I AW
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARA-DAEHPSFGLRLGNAMLSMLVRFGEIWHAWR 152
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF+ + +D+ SW M+ G+ K+ F EA+ L
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGF----------------------------LEEALDL 184
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----- 352
+ M + PD T +L C G ++H+++++ GF V V NA++
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAK 244
Query: 353 -------------------------------QHQAGELFRLFSLMLASQTKPDHITFNDV 381
H+ LF ML ++ +P+ +T V
Sbjct: 245 CGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV 304
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
A ++ + ++H + +K G A+DV N L+ MY G +G A ++F+ ME D
Sbjct: 305 TVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDA 364
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SW+++I GY + G ++AL+++ M V P+ VT+ L AC+ +G ++ G++L+ +
Sbjct: 365 MSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHEL 424
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS-CKTH 557
QN+ G I + ++++ A++ + +A + MA + D+V W S++A C H
Sbjct: 425 AQNK-GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNH 479
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/644 (31%), Positives = 331/644 (51%), Gaps = 68/644 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C L A +V D +W+ L S C++ + E L F +
Sbjct: 46 YAKCASLQAARKVFDETPHPNVHLWNSTL-RSYCREKQWEETLRLFHLMICTAGEAPDNF 104
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
T + AC+ LR L+LG+ +H + + D + + ++ +Y KCG + +A VF+E
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE 164
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ + V WT+M+ G QN A+ L+ QM + ++ D T S++ AC+ L V
Sbjct: 165 FQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKA 224
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G +H VI+ E L N+L+ +Y K A N+FS + KD+ S
Sbjct: 225 GSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVIS---------- 274
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
W+T+IA A+ ANEA++LF EM ++ P+ +TV S L A
Sbjct: 275 ------------------WSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQA 316
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---------- 361
C +L +G +IH + KGF + V A++ +A +LF+
Sbjct: 317 CAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSW 376
Query: 362 ------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+F ML+ +PD + ++ A + + + LH Y+++
Sbjct: 377 VALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVR 436
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G +VFV L+++Y KCGSLG A +LF M DVV WSS+I Y G G EAL++
Sbjct: 437 SGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEI 496
Query: 464 FRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
F +M ++S VRPN+VT + +L+ACSH GLVEEGL+++ M ++Y + P E +VDLL
Sbjct: 497 FDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLL 556
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G++ +A D IN+M VW +LL +C+ H N+++G+ AA+N+ +DP+++ +
Sbjct: 557 GRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYI 616
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
LL NIYA GKW+ VA L +KERG++K+ GQS +E++ +H+
Sbjct: 617 LLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHS 660
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 215/418 (51%), Gaps = 36/418 (8%)
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
+T + M F+++D A VF ++ +P WN +I G A+ ++ L+S+M ++ L
Sbjct: 755 LTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGL 814
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------- 356
PD L +C L +G IH +++ G +++ V A++ A
Sbjct: 815 KPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARL 874
Query: 357 --------------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
E F LM +S P+ ++ V+ AC + +
Sbjct: 875 VFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGA 934
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L G H Y+++TG D+ V +MDMY KCGSL AR LF+ D+V WS++I
Sbjct: 935 LRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIAS 994
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y G G +A+ LF +M +GVRP+HVT VL+ACSH GL+EEG +++M E+ I
Sbjct: 995 YGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIAR 1054
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+C+VDLL RAG++ EA D I M + D +W SLL +C+ H N+D+ ++ A+++
Sbjct: 1055 KLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHL 1114
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
+DP ++ VLL NIYA+ +W EV ++ M RG K+ G S +E ++H G
Sbjct: 1115 FHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFG 1172
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 251/542 (46%), Gaps = 75/542 (13%)
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
DL AC++ RS+ ++H + + D + ++Y KC SL+ AR VFDE P
Sbjct: 9 DLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHP 65
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
NV W + + + Q + L+ M+ +G PD FT ++AC+GL + LG+ +
Sbjct: 66 NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125
Query: 204 HAHVIKS-EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
H K+ E GS + +AL+ +Y+K ++ +A VF R D W SM+ G+ +
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ--- 182
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLCACT 321
++ EA++LFS+M + ++ D +T+ S++ AC
Sbjct: 183 -------------------------NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACA 217
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------------- 352
L++ G +H +I++ F ++P+ N++L
Sbjct: 218 QLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWST 277
Query: 353 -------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
A E LF M+ + +P+ +T + ACA +LE G ++H + G
Sbjct: 278 MIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKG 337
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
LD V L+DMY+KC A +LF + DVVSW +L+ GYAQ G +++ +FR
Sbjct: 338 FELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFR 397
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M S G++P+ V +V +L A S +G+ ++ L L+ + G + +++L ++
Sbjct: 398 NMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKC 456
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK---IDPTNSAALV 582
G + +A M D+V+W S++A+ HG + ++K + P N L
Sbjct: 457 GSLGDAVKLFKGMIV-RDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLS 515
Query: 583 LL 584
+L
Sbjct: 516 IL 517
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 172/388 (44%), Gaps = 68/388 (17%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+K H I + Q D+ + MY ++ A +VF+++P W MI G + +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G+ +++ELY +M++ GL PD+F F +++C+GL + G+ +H H++ + L
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
AL+ MY K I A VF +A +D+ SW SMI G +A +N
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISG-----YAHNGYN----------- 900
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+E + F M +IP+ +++ S+L AC + +L +G HSY+I+
Sbjct: 901 ------------SETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQT 948
Query: 340 GFYSNVPVCNAILQ-----------------------------------HQAG-ELFRLF 363
GF ++ V AI+ H G + LF
Sbjct: 949 GFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLF 1008
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG--LMDMYV 421
M+ + +P H+TF V+ AC+ LE G +++ +M + + N ++D+
Sbjct: 1009 DQMVKAGVRPSHVTFTCVLSACSHSGLLEEG-KMYFQLMTEEFVIARKLSNYACMVDLLG 1067
Query: 422 KCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G L A +L M +PD W SL+
Sbjct: 1068 RAGQLSEAVDLIENMPVEPDASIWGSLL 1095
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 157/327 (48%), Gaps = 37/327 (11%)
Query: 78 IRPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P +A + +C+ L LQ G+ +H H++ C D + +++MY KCG +E AR
Sbjct: 814 LKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAAR 873
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+VFD+M R++VSWT+MI+G + NG + + + M SG++P++ + S++ AC L
Sbjct: 874 LVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLG 933
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G H++VI++ ++ A++ MY+K + A +F A KD+ W +MI
Sbjct: 934 ALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+ I G + +A+ LF +M + P +T
Sbjct: 994 SYG-----------------------IHG-----HGRKAIDLFDQMVKAGVRPSHVTFTC 1025
Query: 316 LLCACTSPLSLYQG-----MQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
+L AC+ L +G + ++I + SN C L +AG+L L+
Sbjct: 1026 VLSACSHSGLLEEGKMYFQLMTEEFVIARKL-SNY-ACMVDLLGRAGQLSEAVDLIENMP 1083
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQL 397
+PD + ++GAC +L++ ++
Sbjct: 1084 VEPDASIWGSLLGACRIHNNLDLAEKI 1110
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 124/582 (21%), Positives = 255/582 (43%), Gaps = 60/582 (10%)
Query: 19 WDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFR- 77
W FEL + A ++D +++ DLF L K+++ + + + QN ++
Sbjct: 335 WKGFELDFSVSTA--LIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKS 392
Query: 78 -----------IRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
I+P A +++A S L Q +H +++ S + + ++ +
Sbjct: 393 MGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIEL 452
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFT 183
Y KCGSL DA +F M R+VV W++MIA +G+ A+E++ QM++ S + P+ T
Sbjct: 453 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVT 512
Query: 184 FGSIIRACS--GLCCVGLG---RQLHAHVIK--SEHGSHLISQNALIAMYTKFDRILDAW 236
F SI+ ACS GL GL R +H + ++ SEH ++ L+ + + +D
Sbjct: 513 FLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVD---LLGRIGQLGKAMDII 569
Query: 237 NVFSSIARKDITSWGSMIDG---FSKLDFARTVFNEM--ESPNLASWNTIIAGVASCS-- 289
N A + WG+++ ++ + P+ A + +++ + +
Sbjct: 570 NRMPIPAGPHV--WGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGK 627
Query: 290 --NANEAMSLFSEMGDRELIPDGLT-VRSLLCACTSPLSLYQGMQIHSYIIKK-----GF 341
N E + E G +++ + VR + + + + Q +++K G
Sbjct: 628 WDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGK 687
Query: 342 YSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+P + +L H G + + + + A+++K I + + L+ + H I
Sbjct: 688 EVYIPDLDFLL-HDTGAVLQFWQRIKATESKYKTIGSAPGTDTISCFSCLK---KTHAKI 743
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
GL D ++ MYV + +A +F + +P W+ +I G+A G +L
Sbjct: 744 FAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSL 803
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM-----QNEYGIIPTRERRS 516
+L+ +M G++P+ L +C+ + ++ G +++ + N+ + +
Sbjct: 804 ELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV------DA 857
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+VD+ A+ G + A ++MA D+V W S+++ +G
Sbjct: 858 ALVDMYAKCGDIEAARLVFDKMAV-RDLVSWTSMISGYAHNG 898
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 147/295 (49%), Gaps = 14/295 (4%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYN-EALVAFDFLQNNTNFRI 78
D + C ++ A V D R D+ + S N YN E L FD ++++
Sbjct: 861 DMYAKCGDIEAARLVFDKMAVR--DLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPN 918
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R S + L+ AC +L +L+ G H +++ + + D ++ I++MY KCGSL+ AR +F
Sbjct: 919 RVSILSVLL-ACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
DE +++V W+AMIA +G AI+L+ QM+++G+ P TF ++ ACS +
Sbjct: 978 DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037
Query: 199 LGRQLHAHVIKSEH--GSHLISQNALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSMID 255
G+ ++ ++ E L + ++ + + ++ +A ++ ++ D + WGS++
Sbjct: 1038 EGK-MYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096
Query: 256 G---FSKLDFARTVFNEM--ESPNLASWNTIIAGV-ASCSNANEAMSLFSEMGDR 304
+ LD A + + + P A ++ +++ + A+ S NE + M R
Sbjct: 1097 ACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARR 1151
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 309/585 (52%), Gaps = 64/585 (10%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ P + ++ S+ +L +H I + +A + +++ Y CGS+ AR
Sbjct: 38 ELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQ 97
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
FD + +++VSWT M+A ++N + +++L+ +M G P+ FTF +++AC GL
Sbjct: 98 AFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEA 157
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+G+ +H V+K+ + L L+ +YTKF DA +V
Sbjct: 158 FSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFG---DANDVLR---------------- 198
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
VF EM ++ W+ +I+ A + + EA+ LF +M ++P+ T S+
Sbjct: 199 ---------VFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASV 249
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL--------------- 359
L +C S +L G Q+H +++K G NV V NA++ A G L
Sbjct: 250 LQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNE 309
Query: 360 -------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
L+ ML Q + +T++ V+ ACA++A++E+GTQ+H
Sbjct: 310 VTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSL 369
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+KT DV V N L+DMY KCGS+ +AR +F+ + + D +SW+++I GY+ G EA
Sbjct: 370 SLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEA 429
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
LK F+ M+ + PN +T V +L+ACS+ GL++ G ++ M +YGI P E +C+V
Sbjct: 430 LKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVW 489
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R+G + +A I ++ + ++ VW++LL +C H +VD+G +A+ IL+IDP + A
Sbjct: 490 LLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEAT 549
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL NIYA + +W VA + MK +GV+K PG SWIE Q +H
Sbjct: 550 HVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVH 594
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 42/291 (14%)
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
Q E+ LFS + + + F ++ ++ E+ LH I K G + FV
Sbjct: 21 QLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGT 80
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
L+D Y CGS+ SAR+ F+ + D+VSW+ ++ YA+ +++L+LF MR G P
Sbjct: 81 ALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNP 140
Query: 475 NHVTLVGVLTAC--------------------------SHVGLVE------EGLQLYRIM 502
NH T GVL AC VGL++ + + R+
Sbjct: 141 NHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVF 200
Query: 503 QN--EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM--AFD-DDIVVWKSLLASCKTH 557
+ ++ +IP S ++ A++ + EA + QM AF + + S+L SC +
Sbjct: 201 EEMPKHDVIPW----SFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASI 256
Query: 558 GNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
N+ +GK+ ++LK+ N L ++YA G+ + +L + R
Sbjct: 257 ENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNR 307
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 331/650 (50%), Gaps = 80/650 (12%)
Query: 32 GEVVDSFLRRFDDIWD-FDLFSSLCKQNLYNEALVA-----FDFLQNNTNFR-------I 78
G + S L RF +IW + +F+ + ++++++ ++ FL+ + +
Sbjct: 134 GNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP T+ ++ C + ++GR+VH H+L + + N ++ MY KCG + AR
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD M + +SW AMIAG +N + A +EL++ ML++ + P+ T S+ A L
Sbjct: 254 VFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
VG +++H +K + N+LI MYT R+ DA +FS
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFS---------------- 357
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
ME+ + SW +I+G ++A+ +++ M + PD +T+ S
Sbjct: 358 ------------RMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASA 405
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L AC L G+++H KGF V V NA+L+
Sbjct: 406 LAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDV 465
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
H++ E F ML KP+ +TF + ACAA +L G ++H Y
Sbjct: 466 VSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAY 524
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+++ G+ + +V N L+D+YVKCG A F+ + DVVSW+ ++ G+ G G+ A
Sbjct: 525 VLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIA 584
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L LF +M G P+ VT V +L ACS G+V +G +L+ +M ++ I+P + +C+VD
Sbjct: 585 LSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVD 644
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL+R G++ EA + IN+M D VW +LL C+ H +V++G+ AA+ IL+++P + A
Sbjct: 645 LLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAY 704
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
VLLC++Y +GKW +VAR+ +M+E+G+ + G SW+E++ HA D
Sbjct: 705 HVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTD 754
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 240/546 (43%), Gaps = 77/546 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y L C R++ G + + L N +L+M + G + A VF +M
Sbjct: 98 AYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKM 157
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+V SW M+ G + G A++LY +ML +G+ PD +TF ++R C G+ +GR
Sbjct: 158 PERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGR 217
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++HAHV++ G + NAL+ MY K I+ A VF +A D SW
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISW----------- 266
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N +IAG + LF M + E+ P+ +T+ S+ A
Sbjct: 267 -----------------NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------- 360
+ ++H + +K+GF +V CN+++Q AG++F
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369
Query: 361 ---------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+++LM PD +T + ACA + L++G +LH G
Sbjct: 370 MISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
V V N L++MY K + A E+F FM + DVVSWSS+I G+ EAL FR
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFR 489
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGIIPTRERRSCVVDL 521
M V+PN VT + L+AC+ G + G +++ R G +P + ++DL
Sbjct: 490 YMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDL 543
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI--DPTNSA 579
+ G+ A + + + D+V W +L+ HG D+ ++++ P
Sbjct: 544 YVKCGQTSYAWAQFSVHS-EKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602
Query: 580 ALVLLC 585
+ LLC
Sbjct: 603 FVALLC 608
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 188/417 (45%), Gaps = 69/417 (16%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH-LISQNALIAMYTKFDRILDAWN 237
PD+ + ++ R C V G + A +EH S L NA+++M +F I AW
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARA-DAEHPSFGLRLGNAMLSMLVRFGEIWHAWR 152
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF+ + +D+ SW M+ G+ K+ F EA+ L
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGF----------------------------LEEALDL 184
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----- 352
+ M + PD T +L C G ++H+++++ GF V V NA++
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAK 244
Query: 353 -------------------------------QHQAGELFRLFSLMLASQTKPDHITFNDV 381
H+ LF ML ++ +P+ +T V
Sbjct: 245 CGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV 304
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
A ++ + ++H + +K G A+DV N L+ MY G +G A ++F+ ME D
Sbjct: 305 TVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDA 364
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SW+++I GY + G ++AL+++ M V P+ VT+ L AC+ +G ++ G++L+ +
Sbjct: 365 MSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHEL 424
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS-CKTH 557
QN+ G I + ++++ A++ + +A + MA + D+V W S++A C H
Sbjct: 425 AQNK-GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNH 479
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 306/573 (53%), Gaps = 12/573 (2%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EA+ F +L +T R+ +A LISA +SL G +H + + D ++ N
Sbjct: 73 EAVQLF-YLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAF 131
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
+ MY K S+E+ F M N+ S +++G + + +Q+L G P+
Sbjct: 132 VTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNM 191
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVF 239
+TF SI++ C+ + G+ +H VIKS SHL N+L+ +Y K A VF
Sbjct: 192 YTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHL--WNSLVNVYAKCGSANYACKVF 249
Query: 240 SSIARKDITSWGSMIDGFSKLDFAR--TVFNEMES----PNLASWNTIIAGVASCSNANE 293
I +D+ SW ++I GF + +FN+M + PN+ ++ +I+ +S S+ +
Sbjct: 250 GEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 309
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
+ +++ L + +L+ L I + +IK+ ++ + Q
Sbjct: 310 GKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 369
Query: 354 HQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
GE + F M KP+ T + C+ +A+L+ G QLH +K G + D+FV
Sbjct: 370 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFV 429
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
+ L+DMY KCG + A +F+ + D VSW+++I GY+Q G G +ALK F M G
Sbjct: 430 ASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGT 489
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
P+ VT +GVL+ACSH+GL+EEG + + + YGI PT E +C+VD+L RAG+ HE E
Sbjct: 490 VPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVE 549
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
FI +M ++++W+++L +CK HGN++ G+RAA + +++P + +LL N++A+ G
Sbjct: 550 SFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKG 609
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
W++V + M RGV+K PG SW+E+ ++H
Sbjct: 610 MWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVH 642
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 202/642 (31%), Positives = 324/642 (50%), Gaps = 70/642 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ +C + +A ++ DS + W+ L + + EA F + + + PS
Sbjct: 102 YSICGNVTEARQIFDSVENKTVVTWN-ALIAGYAQVGHVKEA---FALFRQMVDEGLEPS 157
Query: 82 --TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ ++ ACSS L G++VH ++++ D + +++MY K GS++DAR VFD
Sbjct: 158 IITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFD 217
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ R+V ++ M+ G +++G A EL+ +M Q GL P++ +F SI+ C +
Sbjct: 218 GLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAW 277
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +HA + + + +LI MYT + GS I+G
Sbjct: 278 GKAVHAQCMNAGLVDDIRVATSLIRMYT---------------------TCGS-IEG--- 312
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
AR VF+ M+ ++ SW +I G A N +A LF+ M + + PD +T ++ A
Sbjct: 313 ---ARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNA 369
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------------------- 357
C +L +IHS + GF +++ V A++ A
Sbjct: 370 CAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSW 429
Query: 358 --------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E F F LM S +PD +T+ +++ AC + +L++G +++ +K
Sbjct: 430 SAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIK 489
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
L V + N L+ M K GS+ AR +F+ M DV++W+++I GY+ G EAL L
Sbjct: 490 ADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYL 549
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM RPN VT VGVL+ACS G V+EG + + + GI+PT + C+VDLL
Sbjct: 550 FDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLG 609
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG + EAE I M +W SLL +C+ HGN+DV +RAAE L IDP + A V
Sbjct: 610 RAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQ 669
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L ++YA++G WE VA++ M+ RG+RK G +WIE+ K+H
Sbjct: 670 LSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVH 711
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 242/520 (46%), Gaps = 70/520 (13%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
I TY L C+ LR LG++V DHI+ Q + N ++ +Y CG++ +AR +
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD + + VV+W A+IAG +Q G A L+ QM+ GL P TF S++ ACS +
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+++HA V+ + S AL++MY K + DA VF + +D++++ M+ G+
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+K + +A LF M L P+ ++ S+L
Sbjct: 235 AK----------------------------SGDWEKAFELFYRMQQVGLKPNKISFLSIL 266
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-------------------- 357
C +P +L G +H+ + G ++ V ++++
Sbjct: 267 DGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVV 326
Query: 358 ----------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ F LF+ M +PD IT+ +M ACA A+L ++H +
Sbjct: 327 SWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQV 386
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
G D+ V L+ MY KCG++ AR++F+ M DVVSWS++I Y + G G EA
Sbjct: 387 DIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAF 446
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR--IMQNEYGIIPTRERRSCVV 519
+ F M+ S + P+ VT + +L AC H+G ++ G+++Y I + +P + ++
Sbjct: 447 ETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPL---GNALI 503
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ A+ G V A + M D++ W +++ HGN
Sbjct: 504 IMNAKHGSVERARYIFDTMV-RRDVITWNAMIGGYSLHGN 542
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 195/637 (30%), Positives = 321/637 (50%), Gaps = 70/637 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
+D+A V + ++ + ++ + + K + ++AL F ++++ + P Y
Sbjct: 85 VDEAARVFEPIDKKLNVLY-YTMLKGFAKVSDLDKALKFFVRMRDD---EVEPVVYNFTY 140
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+ C L++G+++H ++ S D + NMY KC + +AR VFD MP+R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERD 200
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+VSW ++AG SQNG A+E+ M + L P T S++ A S L + +G+++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHG 260
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+ +++ S + AL+ MY K GS L AR
Sbjct: 261 YAMRAGFDSLVNIATALVDMYAK---------------------CGS-------LKTARL 292
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+F+ M N+ SWN++I N EAM +F +M D + P ++V L AC
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------------------- 353
L +G IH ++ NV V N+++
Sbjct: 353 LERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILG 412
Query: 354 -HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
Q G E FS M A KPD T+ V+ A A ++ +H +M+ L +
Sbjct: 413 FAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKN 472
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
VFV L+DMY KCG++ AR +F+ M + V +W+++I GY G G+ AL+LF M+
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQK 532
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
+RPN VT + V++ACSH GLVE GL+ + +M+ Y I P+ + +VDLL RAGR++
Sbjct: 533 GTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLN 592
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
EA DFI QM + V+ ++L +C+ H NV+ ++ AE + +++P + VLL NIY
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYR 652
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++ WE+V ++ SM +G+RK PG S +EI+ ++H+
Sbjct: 653 AASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHS 689
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 239/524 (45%), Gaps = 78/524 (14%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+ CSSL+ L R + I + + + +++++ + GS+++A VF+ + +
Sbjct: 41 ALLLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDK 97
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ V + M+ G ++ + A++ +V+M + P + F +++ C + +G+++
Sbjct: 98 KLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H ++KS L + L MY K ++ +A VF + +D+ SW +++ G+S+ A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
R A+ + + M + L P +T+ S+L A ++
Sbjct: 218 RM----------------------------ALEMVNLMCEENLKPSFITIVSVLPAVSAL 249
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------------------- 356
+ G +IH Y ++ GF S V + A++ A
Sbjct: 250 RLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMI 309
Query: 357 ---------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
E +F ML KP ++ + ACA + LE G +H ++ L
Sbjct: 310 DAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELD 369
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+V V+N L+ MY KC + +A +F ++ +VSW+++I+G+AQ G EAL F +M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQM 429
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQN--EYGIIPTRERRSCVVDLLAR 524
++ V+P+ T V V+TA + + + ++ +M+N + + T + +VD+ A+
Sbjct: 430 QARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVT----TALVDMYAK 485
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
G + A + M+ + + W +++ THG +GK A E
Sbjct: 486 CGAIMIARLIFDMMS-ERHVTTWNAMIDGYGTHG---IGKAALE 525
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 185/569 (32%), Positives = 289/569 (50%), Gaps = 74/569 (13%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
NE+LV F+ ++ + P A ++ AC+ L ++ R + D+I K Q D +L
Sbjct: 241 NESLVLFEKMREEG---VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 297
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
+++MY KCG +E AR +FD M ++NV+SW+AMIA +GQ A++L+ ML SG++
Sbjct: 298 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 357
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAW 236
PD+ T S++ AC + C L + H S HG +LI N L+ Y+ + + DA+
Sbjct: 358 PDKITLASLLYAC--INCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAY 415
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+F + +D S W+ ++ G A +
Sbjct: 416 GLFDGMCVRDSVS----------------------------WSVMVGGFAKVGDYMNCFG 447
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
F E+ PD T+ P C A
Sbjct: 448 TFRELIRCGARPDNYTL--------------------------------PFCG-----NA 470
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E LF M PD + V+ ACA + ++ + YI + LDV + +
Sbjct: 471 NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAM 530
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+DM+ KCG + SARE+F+ ME+ +V+SWS++I Y G G +AL LF M SG+ PN
Sbjct: 531 IDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNK 590
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+TLV +L ACSH GLVEEGL+ + +M +Y + + +CVVDLL RAGR+ EA I
Sbjct: 591 ITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIE 650
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
M + D +W + L +C+TH +V + ++AA ++L++ P N +LL NIYA++G+WE+
Sbjct: 651 SMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWED 710
Query: 597 VARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VA+ M +R ++K+PG +WIE+ K H
Sbjct: 711 VAKTRDLMSQRRLKKIPGWTWIEVDNKSH 739
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 148/593 (24%), Positives = 246/593 (41%), Gaps = 109/593 (18%)
Query: 58 NLYN--EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
NL+N E F FLQ R+ P Y ISA + R+L R+VH +
Sbjct: 62 NLHNREEESSKFHFLQ-----RLNPKFY---ISALVNCRNLTQVRQVHAQASVHGMLENI 113
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
V+ N ++ Y +L+DA +FD M R+ VSW+ M+ G ++ G + ++++
Sbjct: 114 VVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRC 173
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G PD +T +IRAC L + L Q AL+ MY K I DA
Sbjct: 174 GARPDNYTLPFVIRACRDL------KNL---------------QMALVDMYVKCREIEDA 212
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+F + +D+ +W MI G+ A C ANE++
Sbjct: 213 RFLFDKMQERDLVTWTVMIGGY----------------------------AECGKANESL 244
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
LF +M + ++PD + + +++ AC ++++ I YI +K F +V + A++
Sbjct: 245 VLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMY 304
Query: 354 ------HQAGELF----------------------------RLFSLMLASQTKPDHITFN 379
A E+F LF +ML+S PD IT
Sbjct: 305 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLA 364
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
++ AC +L Q+H G+ ++ V N L+ Y +L A LF+ M
Sbjct: 365 SLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVR 424
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D VSWS ++ G+A+ G FR + G RP++ TL G E L L+
Sbjct: 425 DSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTL-------PFCGNANESLVLF 477
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEA---EDFINQMAFDDDIVVWKSLLASCKT 556
M+ E G++P + VV A+ G +H+A +D+I + F D+++ +++
Sbjct: 478 DKMREE-GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMI---DM 533
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
H + A E +++ N + + Y G+ + L M G+
Sbjct: 534 HAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 586
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 312/581 (53%), Gaps = 66/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L++A SS L G+ VH H++ + + + VL +++MY KC S+EDA V
Sbjct: 219 TFVKLLAA-SSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLT 277
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ +V WTA+I+G +Q+ + AI + +M SG++P+ FT+ I+ ACS + + LG+
Sbjct: 278 LEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGK 337
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTK-FDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+H+ V+ + + + N+L+ MY K + I DA F IA
Sbjct: 338 QIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIA----------------- 380
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
SPN+ SW ++IAG + E++ +F M + P+ T+ ++L AC
Sbjct: 381 -----------SPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLM--------- 366
+ SL Q ++H YIIK ++V V NA++ AG + + + S+M
Sbjct: 430 GTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYT 489
Query: 367 -LASQTKPD-----------HITFNDV----------MGACAAMASLEMGTQLHCYIMKT 404
LA++ H+ +DV + A A + +E G QLHCY +K+
Sbjct: 490 SLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKS 549
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
GL + V NGL+D+Y KCG + A F + +PD VSW+ LI G A G AL F
Sbjct: 550 GLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAF 609
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
MR +GV P+ +T + VL ACSH GLV+ GL ++ M+ ++GI P + C+VDLL R
Sbjct: 610 EDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGR 669
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AGR+ EA + I M F D +++K+LL +CK HGN+ +G+ A L++DP++ A VLL
Sbjct: 670 AGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLL 729
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+Y SG+ E + M+ERGVRK PGQSW+E + +H
Sbjct: 730 ANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVH 770
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 246/522 (47%), Gaps = 73/522 (13%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+I S D++S C+S RS++ G +H I+ Q D L N++L++YGKC + +AR
Sbjct: 13 KIEYSLLKDIVSFCNS-RSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQ 71
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+FDEMP R+V SWT +++ + G A+EL+ ML SG P++FT + +R+CS L
Sbjct: 72 LFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALRE 131
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G + A V KS S+ + +ALI Y+K +A+ VF + DI SW M+
Sbjct: 132 FNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSS 191
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F + SW ++A+ L+ M + P+ T L
Sbjct: 192 FVE---------------AGSW-------------SQALQLYHRMIQTGVAPNEFTFVKL 223
Query: 317 LCACTSPLSLYQGMQIHSYIIK--------------------KGFYSNVPVCNAILQHQA 356
L A +S L L G +H++++ + V V L++
Sbjct: 224 L-AASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDV 282
Query: 357 ----------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
E F M S P++ T++ ++ AC+++ +L++G Q+H
Sbjct: 283 FLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSR 342
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSL-GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
++ GL DV V N L+DMY+KC ++ A F + P+V+SW+SLI G+++ G EE
Sbjct: 343 VVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEE 402
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSC 517
++K+F M+ GVRPN TL +L AC + + + +L Y I N + +
Sbjct: 403 SIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVV---GNA 459
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+VD A G V +A + M D++ + SL GN
Sbjct: 460 LVDAYAGLGMVDDAWH-VTSMMKHRDVITYTSLATRINQTGN 500
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 9/230 (3%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ ++D A V R D+ + ++ Q +E + N + R+
Sbjct: 462 DAYAGLGMVDDAWHVTSMMKHR--DVITYTSLATRINQTGNHEMALNIITHMNKDDVRMD 519
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+ A +SA + + ++ G+++H + + S + N ++++YGKCG + DA F
Sbjct: 520 GFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFL 579
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS--GLCCV 197
E+ + + VSW +I G + NG ++A+ + M +G+ PDQ T ++ ACS GL +
Sbjct: 580 EITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDM 639
Query: 198 GLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
GL + ++ +HG L L+ + + R+ +A NV ++ K
Sbjct: 640 GLD---YFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFK 686
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 299/578 (51%), Gaps = 68/578 (11%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ AC+ L SL+LG+++H + + D + N +LNMY GSLE + +F+ +P R+
Sbjct: 262 VQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 321
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL-GRQLHA 205
W +MI+ + G A++L+++M G+ D+ T ++ C L L G+ LHA
Sbjct: 322 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHA 381
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
HVIKS NAL++MYT+ N S+ +
Sbjct: 382 HVIKSGMRIDASLGNALLSMYTEL-------NCVESVQK--------------------- 413
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+F+ M+ ++ SWNT+I +A + +A LF M + E+ P+ T+ S+L AC
Sbjct: 414 IFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTC 473
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNA----------------------------------- 350
L G IH Y++K N P+ A
Sbjct: 474 LDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIAS 533
Query: 351 -ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG--LA 407
+ +QA + LF M+ S+ +P+ +T +V+ + +A+L G LH Y+ + G L
Sbjct: 534 YVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLG 592
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
LD+ + N + MY +CGSL SA +F + +++SW+++I GY G G +A+ F +M
Sbjct: 593 LDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQM 652
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
G RPN VT V VL+ACSH G +E GLQL+ M ++ + P SC+VDLLAR G
Sbjct: 653 LEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGC 712
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ EA +FI+ M + D VW++LL+SC+ + + K E + K++P N+ VLL N+
Sbjct: 713 IDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNV 772
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
YA++G W EV R+ +KE+G+RK PG SWI ++ ++H
Sbjct: 773 YATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVH 810
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 235/538 (43%), Gaps = 71/538 (13%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLH 118
Y EA++ + N R T L+ AC L+LGR VH + L + + +
Sbjct: 135 YEEAMLLVREM-GRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA 193
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
++ Y + + ++FD M RN+VSW AMI+G G A+EL+VQML +
Sbjct: 194 TALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVK 252
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
D T ++AC+ L + LG+Q+H IK E L NAL+ MY+ + + +
Sbjct: 253 FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQL 312
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F S+ +D W SMI + A+ EAM LF
Sbjct: 313 FESVPNRDAPLWNSMISAY----------------------------AAFGCHEEAMDLF 344
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLS-LYQGMQIHSYIIKKGFYSNVPVCNAILQ---- 353
M + D TV +L C S L +G +H+++IK G + + NA+L
Sbjct: 345 IRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTE 404
Query: 354 ----HQAGELF----------------------------RLFSLMLASQTKPDHITFNDV 381
++F LF M S+ KP+ T +
Sbjct: 405 LNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISI 464
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ AC + L+ G +H Y+MK + ++ + L DMY+ CG +AR+LF D D+
Sbjct: 465 LAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDL 524
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-R 500
+SW+++I Y + +AL LF RM S PN VT++ VL++ +H+ + +G L+
Sbjct: 525 ISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAY 583
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + + + + + + AR G + AE+ + +I+ W +++A +G
Sbjct: 584 VTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNG 640
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 241/525 (45%), Gaps = 82/525 (15%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L NNT + ++ AC++ +++ G+ +H I + D + +++ Y KCG
Sbjct: 50 LPNNTTLPL-------VLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCG 102
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
+EDAR VFD M R+VV W AM+ G G A+ L +M + L P+ T +++
Sbjct: 103 FVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLL 162
Query: 190 ACSGLCCVGLGRQLHAHVIKS---EHGSHLISQNALIAMYTKFD-RILDAWNVFSSIARK 245
AC G + LGR +H + +++ + H+ + ALI Y +FD R+L +F + +
Sbjct: 163 ACEGASELRLGRGVHGYCLRNGMFDSNPHVAT--ALIGFYLRFDMRVLPL--LFDLMVVR 218
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+I SW +MI G+ + + +A+ LF +M E
Sbjct: 219 NIVSWNAMISGYYDV----------------------------GDYFKALELFVQMLVDE 250
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----------H 354
+ D +T+ + AC SL G QIH IK F ++ + NA+L H
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310
Query: 355 QA-------------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
Q E LF M + K D T ++ C +A
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 370
Query: 390 S-LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
S L G LH +++K+G+ +D + N L+ MY + + S +++F+ M+ D++SW+++I
Sbjct: 371 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 430
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
+ A+ +A +LF RMR S ++PN T++ +L AC V ++ G ++ + ++ I
Sbjct: 431 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM-KHSI 489
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ R+ + D+ G A D D D++ W +++AS
Sbjct: 490 EINQPLRTALADMYMNCGDEATARDLFEGCP-DRDLISWNAMIAS 533
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 170/378 (44%), Gaps = 64/378 (16%)
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W ++I + + A + Y QM G++P+ T +++AC+ V G+ +H +
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
++ + A++ Y K + DA VF +++ +D+ W +M+ G+
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGY----------- 129
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
W EAM L EMG L P+ T+ +LL AC L
Sbjct: 130 -------VGWGCY----------EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRL 172
Query: 329 GMQIHSYIIKKG-FYSNVPVCNAIL--------------------------------QHQ 355
G +H Y ++ G F SN V A++ +
Sbjct: 173 GRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYD 232
Query: 356 AGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
G+ F+ LF ML + K D +T + ACA + SL++G Q+H +K D+++
Sbjct: 233 VGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYI 292
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
+N L++MY GSL S+ +LF + + D W+S+I YA FGC EEA+ LF RM+S GV
Sbjct: 293 LNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGV 352
Query: 473 RPNHVTLVGVLTACSHVG 490
+ + T+V +L+ C +
Sbjct: 353 KKDERTVVIMLSMCEELA 370
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 211/481 (43%), Gaps = 72/481 (14%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L+ + ++ +S R +W+ + S+ + EA+ F +Q+ + T ++
Sbjct: 306 LESSHQLFESVPNRDAPLWN-SMISAYAAFGCHEEAMDLFIRMQSE-GVKKDERTVVIML 363
Query: 88 SACSSLRS-LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
S C L S L G+ +H H++ S + DA L N +L+MY + +E + +FD M ++
Sbjct: 364 SMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDI 423
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW MI ++N A EL+ +M +S + P+ +T SI+ AC + C+ GR +H +
Sbjct: 424 ISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGY 483
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
V+K + + AL MY A ++F +D+ SW +MI + K
Sbjct: 484 VMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVK------- 536
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
+ A++A+ LF M E P+ +T+ ++L + T +L
Sbjct: 537 ---------------------NNQAHKALLLFHRMIS-EAEPNSVTIINVLSSFTHLATL 574
Query: 327 YQGMQIHSYIIKKGF----------------------------YSNVPVCNAI------- 351
QG +H+Y+ ++GF + +P N I
Sbjct: 575 PQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIA 634
Query: 352 ---LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL-HCYIMKTGLA 407
+ + + FS ML +P+ +TF V+ AC+ +EMG QL H + +
Sbjct: 635 GYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVT 694
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
++ + ++D+ + G + ARE + M +PD W +L+ + ++A +F +
Sbjct: 695 PELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEK 754
Query: 467 M 467
+
Sbjct: 755 L 755
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 349 NAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
N++++HQA + ++ M + P++ T V+ ACAA ++E G +H I
Sbjct: 22 NSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQG 81
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
T L DV V ++D Y KCG + AR +F+ M D DVV W++++ GY +GC EEA+ L
Sbjct: 82 TDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLL 141
Query: 464 FRRMRSSGVRPNHVTLVGVLTACS-------------------------HVGLVEEGLQL 498
R M +RPN T+V +L AC HV G L
Sbjct: 142 VREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYL 201
Query: 499 ---YRIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFDD---DIVVWKSL 550
R++ + ++ R S ++ G +A + QM D+ D V
Sbjct: 202 RFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVA 261
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVARLMGSMKER 607
+ +C G++ +GK+ + +K + ++ L N+Y+++G E +L S+ R
Sbjct: 262 VQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 319
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
++DP W+S+I A + L + +M S GV PN+ TL VL AC+ VE G
Sbjct: 15 IKDPK--HWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERG 72
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA--- 552
++R +Q ++ + VVD + G V +A + M+ D D+V+W +++
Sbjct: 73 KSIHRSIQGT-DLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS-DRDVVLWNAMVYGYV 130
Query: 553 --SCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
C + V + EN L+ + AL+L C
Sbjct: 131 GWGCYEEAMLLVREMGREN-LRPNSRTMVALLLAC 164
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 331/642 (51%), Gaps = 72/642 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTY 83
C L+++A +V + R W+ + + E+ AF + L +F +T
Sbjct: 149 CGLVEEAVKVFEHMPERNLVSWN-SIICGFSENGFLQESFNAFREMLVGEESFVPDVATL 207
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++ C+ ++ G VH + + +++N +++MY KC L +A+++FD+ +
Sbjct: 208 VTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDK 267
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYV----QMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+N+VSW +MI G ++ +E+ Y+ Q + + D+FT +++ C +
Sbjct: 268 KNIVSWNSMIGGYAR--EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQS 325
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
++LH + + S+ + NA IA YT+ + +
Sbjct: 326 LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSS------------------------ 361
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
VF+ M++ ++SWN ++ G A S+ +A+ L+ +M D L PD T+ SLL A
Sbjct: 362 ----ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA 417
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNV---------------PVCNAIL----QHQA---- 356
C+ SL+ G +IH + ++ G + P +L +H++
Sbjct: 418 CSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSW 477
Query: 357 -------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E LF ML+ +P I V GAC+ +++L +G +LHC+ +K
Sbjct: 478 NVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALK 537
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
L D+FV + ++DMY K G +G ++ +F+ + + DV SW+ +I GY G G+EAL+L
Sbjct: 538 AHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALEL 597
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F +M G++P+ T G+L ACSH GLVE+GL+ + M N + I P E +CVVD+L
Sbjct: 598 FEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLG 657
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAGR+ +A I +M D D +W SLL+SC+ HGN+ +G++ A +L+++P VL
Sbjct: 658 RAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVL 717
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ N++A SGKW++V R+ G MK+ G++K G SWIE+ K+H
Sbjct: 718 ISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVH 759
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 155/559 (27%), Positives = 272/559 (48%), Gaps = 18/559 (3%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ +C + V D R+ W+ + S+ + L+ +A+ F L + T +
Sbjct: 44 YSMCGSPSDSRMVFDKLRRKNLFQWN-AIVSAYTRNELFEDAMSIFSELISVTEHKPDNF 102
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T +I AC+ L L LG+ +H D + N ++ MYGKCG +E+A VF+ M
Sbjct: 103 TLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHM 162
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQML--QSGLMPDQFTFGSIIRACSGLCCVGL 199
P+RN+VSW ++I G S+NG + + +ML + +PD T +++ C+G +
Sbjct: 163 PERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEK 222
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G +H +K L+ N+LI MY+K + +A +F +K+I SW SMI G+++
Sbjct: 223 GMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAR 282
Query: 260 -LDFARTVF--NEMESPNL---ASWNTIIAGVASCSNANEAMSLFSEMG---DRELIPDG 310
D RT + +M++ + A TI+ + C +E SL G L +
Sbjct: 283 EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNE 342
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLAS 369
L + + A T +L ++ + K S N +C + L+ M S
Sbjct: 343 LVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDS 402
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
PD T ++ AC+ M SL G ++H + ++ GLA+D F+ L+ +Y+ CG +A
Sbjct: 403 GLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAA 462
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+ LF+ ME +VSW+ +I GY+Q G +EA+ LFR+M S G++P + ++ V ACS +
Sbjct: 463 QVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQL 522
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
+ G +L+ + + S ++D+ A+ G + ++ +++ + D+ W
Sbjct: 523 SALRLGKELHCFALKAH-LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNV 580
Query: 550 LLASCKTHGNVDVGKRAAE 568
++A HG GK A E
Sbjct: 581 IIAGYGIHGR---GKEALE 596
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 220/456 (48%), Gaps = 70/456 (15%)
Query: 86 LISACSSLRSLQLGRKVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
L+ AC + +++GR++H+ + S++ D VL+ I+ MY CGS D+RMVFD++ ++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
N+ W A+++ ++N A+ ++ +++ + PD FT +I+AC+GL +GLG+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H K + S + NALIAMY K + +A VF + +++ SW S+I GFS+ F
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLCACT 321
+ FN F EM G+ +PD T+ ++L C
Sbjct: 184 QESFNA----------------------------FREMLVGEESFVPDVATLVTVLPVCA 215
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------- 360
+ +GM +H +K G + V N+++ +A LF
Sbjct: 216 GEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNS 275
Query: 361 ------------RLFSLMLASQT-----KPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
R F L+ QT K D T +V+ C + L+ +LH Y +
Sbjct: 276 MIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWR 335
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
GL + V N + Y +CG+L S+ +F+ M+ V SW++L+ GYAQ +AL L
Sbjct: 336 HGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDL 395
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+ +M SG+ P+ T+ +L ACS + + G +++
Sbjct: 396 YLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIH 431
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 201/504 (39%), Gaps = 110/504 (21%)
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKS-EHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
G +++AC + +GR+LH V S + + + +I MY+ D+ VF +
Sbjct: 2 GVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR 61
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-G 302
RK++ W +++ +++ NE+ +AMS+FSE+
Sbjct: 62 RKNLFQWNAIVSAYTR--------NEL--------------------FEDAMSIFSELIS 93
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------- 352
E PD T+ ++ AC L L G IH K S+V V NA++
Sbjct: 94 VTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVE 153
Query: 353 ------QHQA--------------------GELFRLFSLMLASQTK--PDHITFNDVMGA 384
+H E F F ML + PD T V+
Sbjct: 154 EAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPV 213
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA +E G +H +K GL ++ V N L+DMY KC L A+ LF+ + ++VSW
Sbjct: 214 CAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSW 273
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRS--SGVRPNHVTLVGVLTAC---SHVGLVEE----- 494
+S+I GYA+ L ++M++ + ++ + T++ VL C S + ++E
Sbjct: 274 NSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYS 333
Query: 495 ---GLQLYRIMQNEYGIIPTRERRSC----VVDLL---------------ARAGRVHEAE 532
GLQ ++ N + TR C V DL+ A+ +A
Sbjct: 334 WRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKAL 393
Query: 533 DFINQM---AFDDDIVVWKSLLASCKTHGNVDVGKR----AAENILKIDPTNSAALVLLC 585
D QM D D SLL +C ++ G+ A N L +DP +L+
Sbjct: 394 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLL--- 450
Query: 586 NIYASSGKWEEVARLMGSMKERGV 609
++Y GK L M+ R +
Sbjct: 451 SLYICCGKPFAAQVLFDGMEHRSL 474
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 313/598 (52%), Gaps = 46/598 (7%)
Query: 40 RRFDDIWDFDLF--SSLCK----QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
+ FDD+ D LF +++ K + + +AL FD + + F T+ +I ACS +
Sbjct: 138 KLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVM 197
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
L +G +H L S + + N +L MY CG + AR VF+ M +R+VVSW MI
Sbjct: 198 SMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMI 257
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+G QNG+ A+ ++ M+ + + PD T S + +C L + LG ++H V K+
Sbjct: 258 SGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQ 317
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ +NAL+ MY++ I D A VF E +
Sbjct: 318 EKIEVRNALVDMYSRCGGI----------------------------DEASLVFAETKEK 349
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ +W ++I G NA A++L M ++P+ +T+ SLL AC S +Y
Sbjct: 350 DVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAV 409
Query: 334 SY----IIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
SY K VP NA+L A E LF ML + + +H TFN V+ A
Sbjct: 410 SYSFQVFAKTSKKRTVP-WNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPA 468
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM--EDPDVV 442
A +A L+ LH Y++++G + V+ GL+DMY KCGSL A ++F+ + ++ D++
Sbjct: 469 YAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDII 528
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
WS LI GY G GE A+ LF +M SG++PN +T VL ACSH GLV++GL L++ M
Sbjct: 529 VWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYM 588
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
Y P +CVVDLL RAGR+ EA D I M F + +W +LL +C H NV++
Sbjct: 589 IENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVEL 648
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
G+ AAE + +++P ++ +LL NIYA+ G+W++ + M + G+RK P QS + +
Sbjct: 649 GEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSVGV 706
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 134/264 (50%), Gaps = 27/264 (10%)
Query: 307 IPDGLTVRSLLCACT----------SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
+P L V C C S SL+ I + KGF+ +
Sbjct: 119 LPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDA----------- 167
Query: 357 GELFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
R+F M+ S + PD TF V+ AC+ M+ L +G +H + +G + ++FV N
Sbjct: 168 ---LRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNS 224
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+ MY+ CG +G AR++FN M VVSW+++I G+ Q G EEAL +F M + V P+
Sbjct: 225 LLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPD 284
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
T+V L +C ++ +E G+++++++Q + + E R+ +VD+ +R G + EA
Sbjct: 285 SATIVSALPSCGYLKELELGIKVHKLVQKNH-LQEKIEVRNALVDMYSRCGGIDEASLVF 343
Query: 536 NQMAFDDDIVVWKSLLASCKTHGN 559
+ + D++ W S++ +GN
Sbjct: 344 AETK-EKDVITWTSMINGYIMNGN 366
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 302/592 (51%), Gaps = 40/592 (6%)
Query: 38 FLRRFDDIW-DFDLFSSLCKQNLYNEALV--AFDFLQNNTNFRIRPSTYADLISACSSLR 94
++ R D + L ++ Q+L N A V + + + F+ TYA I + R
Sbjct: 758 YISRITDRYIPTPLAAAAAMQSLINRANVYRVYRNISTHRTFQSSSDTYAKAIDMYARDR 817
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+L GR +H H++ +++ Y +CG L +AR +FD++P N+ W +
Sbjct: 818 ALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTG 877
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
C++ G A+ + +M + GL P+QF SI++AC L G +H ++K+ S
Sbjct: 878 ACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFES 937
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES-- 272
+ALI MY+K + A VF I KD+ +M+ G+++ F B ++
Sbjct: 938 DAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQ 997
Query: 273 -----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
PN+ SWNT+IAG + + + +F M + PD ++ S++
Sbjct: 998 QAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVI---------- 1047
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAA 387
GF N E F F ML P +T + ++ AC
Sbjct: 1048 -----------SGFVQNF---------HNHEGFDAFKEMLDQGFCPSSVTISSLLPACTN 1087
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+A+L G ++H Y M G+ DV+V + L+DMY KCG + A+ LF M + + V+W+SL
Sbjct: 1088 VANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSL 1147
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I GYA G EA++LF +M S + +H+T VL ACSH G+VE G L+ MQ +Y
Sbjct: 1148 IFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYR 1207
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
I P E +C+VDLL RAG++ EA D I M + D VW +LL +C+ HGN+++ + AA
Sbjct: 1208 IEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAA 1267
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
E++ +++P + + +LL N+YA +G+W A++ MK+R K PG SWIE
Sbjct: 1268 EHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 159/576 (27%), Positives = 283/576 (49%), Gaps = 65/576 (11%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+S C ++LGR+ H ++ D + +++MY KCG ++ A V+D+M +
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA 179
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+ +I+ ++NG A ++++Q+ G P+ +T+ +++ C + + G+QLHAH
Sbjct: 180 ATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH 239
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
V+K ++ S NAL+ +Y+K + +A VF S+ ++
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQR--------------------- 278
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
N+ SW I G + +A+ FS M + + P+ T +L +C
Sbjct: 279 -------NIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDF 331
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----------------------------- 357
G H+ +IKKG S V V AI+ +G
Sbjct: 332 IDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAG 391
Query: 358 --------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
+ F M+ + T++++ AC++ SL Q+H ++K+ + +
Sbjct: 392 YVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESN 451
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
+ V + L++ Y +CGSL +A ++F + D DVVSW+S+I Y+Q G +A+ L R+M
Sbjct: 452 LHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIE 511
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
G +P T + VL+ACSH GLV+EG + ++ M +Y I P SC+VD+L RAG++
Sbjct: 512 EGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLE 571
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
A DFI ++ +W+ LLA+C+ + N+ + + AE IL ++P ++ V L N+YA
Sbjct: 572 NALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYA 631
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
G+W + M+++ + K PG SWIE+ K++
Sbjct: 632 EVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMY 667
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 206/483 (42%), Gaps = 78/483 (16%)
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWT-AMIAGCSQNGQENAAIELYVQMLQS------ 175
N+ G L +A ++F++ P+R VS T + +GC+ + +E + ++
Sbjct: 48 NVVGGWVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFG 107
Query: 176 -GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
G Q+ F S + C CV LGR+ H V+K GS +LI MY K +
Sbjct: 108 GGFPHRQYVF-SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEV-- 164
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
D A V+++M S + A+ N +I+ A +A
Sbjct: 165 --------------------------DSAVRVYDKMTSLDAATCNCLISAYARNGFFVQA 198
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ- 353
+F ++G+ P+ T ++L C + ++ +G Q+H++++K + S V NA+L
Sbjct: 199 FQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTL 258
Query: 354 --------------------------------HQAGEL---FRLFSLMLASQTKPDHITF 378
+Q G+ + FS+M S +P+ TF
Sbjct: 259 YSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTF 318
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-E 437
+ V+ +C + G H ++K G+A VFV ++DMY G + A + F M
Sbjct: 319 SIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGR 378
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
VSW++LI GY E+A++ F RM V N T + ACS + +Q
Sbjct: 379 AASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQ 438
Query: 498 LY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
++ R++++ + S +++ + G + A Q++ D D+V W S++ +
Sbjct: 439 IHSRLIKS--NVESNLHVASSLIEAYTQCGSLENAVQVFTQIS-DADVVSWNSIIKAYSQ 495
Query: 557 HGN 559
+G+
Sbjct: 496 NGD 498
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 72/128 (56%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY+++ ACSS SL ++H ++ S + + + + ++ Y +CGSLE+A VF ++
Sbjct: 419 TYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQI 478
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+VVSW ++I SQNG AI L +M++ G P TF +++ ACS V G+
Sbjct: 479 SDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQ 538
Query: 202 QLHAHVIK 209
+ +++
Sbjct: 539 EFFKSMVQ 546
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 289/563 (51%), Gaps = 65/563 (11%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G VH +++ + N +++ Y K +EDA MVFDEMPQR+++SW ++I GC+
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
NG + A+EL+V+M G D T S++ AC +G +H + +++ S
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
NAL+ MY+ + + W S +F ME N+ SW
Sbjct: 123 GNALLDMYS------------------NCSDWRS----------TNKIFRNMEQKNVVSW 154
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+I + ++ LF EMG + PD + S L A SL G +H Y I+
Sbjct: 155 TAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIR 214
Query: 339 KGFYSNVPVCNAILQ------------------------------------HQAGELFRL 362
G +PV NA+++ + A E F L
Sbjct: 215 NGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTL 274
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F+ ML Q +P+ +T ++ A A+++SLE G ++H Y ++ G D FV N L+DMYVK
Sbjct: 275 FNEMLL-QLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVK 333
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG+L AR LF+ + + +++SW+ +I GY G G +A+ LF +M+ SG++P+ + +
Sbjct: 334 CGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAI 393
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L ACSH GL +EG + + M+NE+ I P + +C+VDLL G + EA +FI M +
Sbjct: 394 LYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEP 453
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D +W SLL C+ H NV + ++ AE + +++P N+ VLL NIYA + +WE V +L
Sbjct: 454 DSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKN 513
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
+ RG+R+ G SWIE++ K H
Sbjct: 514 KVGGRGLRENTGCSWIEVRGKAH 536
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 301/534 (56%), Gaps = 45/534 (8%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ +P+ N + W M G + + +A++LYV M+ GL+P+ FTF ++++C+
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K L +LI+MY + R+ DA VF + +D+ S+ ++I G
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ ++ A+ +F+E+ ++ SWN +I+G A N +A+ LF EM + PD T+
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGE------------- 358
+++ AC S+ G Q+HS+I GF SN+ + NA+ L + GE
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN 270
Query: 359 -----------------LFR----LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
L++ LF ML S P+ +T ++ ACA + ++++G +
Sbjct: 271 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 330
Query: 398 HCYIMKTGLALDVF----VMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYA 452
H YI K + V + L+DMY KCG + +A ++ + + + +W+++I G+A
Sbjct: 331 HVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFA 390
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G A +F RMR +G+ P+ +T VG+L+ACSH G+++ G ++R M+ +Y I P
Sbjct: 391 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKL 450
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E C++DLL +G EAE+ IN M + D V+W SLL +CK HGN+++G+ A+ ++K
Sbjct: 451 EHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK 510
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV-RKVPGQSWIEIQTKIH 625
I+P N + VLL NIYA++GKW EV ++ + ++G+ +KVPG S IEI + +H
Sbjct: 511 IEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVH 564
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 192/441 (43%), Gaps = 102/441 (23%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ L+ +C+ ++ + G+++H H+L D +H +++MY + G LEDA+ VFD
Sbjct: 77 TFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRS 136
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G ++ G A+EL+
Sbjct: 137 SHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFK 196
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M+++ + PD+ T +++ AC+ + LGRQ+H+ + GS+L NALI +Y+K
Sbjct: 197 EMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCG 256
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ A + ++ KD+ SW ++I G++ ++ +
Sbjct: 257 EVETACELLEGLSNKDVISWNTLIGGYTHMNLYK-------------------------- 290
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK----------- 339
EA+ LF EM P+ +T+ S+L AC ++ G IH YI KK
Sbjct: 291 --EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASS 348
Query: 340 -------------------------GFYSNVPVCNAI-----LQHQAGELFRLFSLMLAS 369
F ++ NA+ + +A F +FS M +
Sbjct: 349 LRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKN 408
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG-LMDMYVKCGSLGS 428
+PD ITF ++ AC+ L++G + + + G ++D+ G
Sbjct: 409 GIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKE 468
Query: 429 ARELFNFME-DPDVVSWSSLI 448
A E+ N M +PD V W SL+
Sbjct: 469 AEEMINTMPMEPDGVIWCSLL 489
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 170/404 (42%), Gaps = 74/404 (18%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +VF + PN WN + G A S+ A+ L+ M L+P+ T L
Sbjct: 22 FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL--------------- 359
L +C + +G QIH +++K GF ++ V +++ Q G L
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141
Query: 360 ---------FRLFSLMLASQTKPDHITFNDV------MGACAAMASLEMGTQLHCYIMKT 404
+ + ++Q D I DV + A + + +L +MKT
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 405 GLALDVFVM-----------------------------------NGLMDMYVKCGSLGSA 429
+ D M N L+D+Y KCG + +A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
EL + + DV+SW++LI GY +EAL LF+ M SG PN VT++ +L AC+H+
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321
Query: 490 GLVEEGLQLYRIMQNEY-GIIPTRER--RSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
G ++ G ++ + + G++ T R+ ++D+ A+ G + A + AF+ +
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381
Query: 547 WKSLLASCKTHGNV----DVGKRAAENILKIDPTNSAALVLLCN 586
W +++ HG D+ R +N ++ D L+ C+
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS 425
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 49/386 (12%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
++S + FD+I W+ + S + Y +AL F + TN + ST A ++
Sbjct: 157 IESAQKMFDEIPIKDVVSWN-AMISGYAETGNYKKALELFKEMMK-TNVKPDESTMATVV 214
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ S++LGR+VH I + + N ++++Y KCG +E A + + + ++V+
Sbjct: 215 SACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVI 274
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +I G + A+ L+ +ML+SG P+ T SI+ AC+ L + +GR +H ++
Sbjct: 275 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 334
Query: 208 IKSEHGSHLIS----QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
K G + + + +LI MY K I A V S A
Sbjct: 335 DKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSA-------------------- 374
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
FN +L++WN +I G A AN A +FS M + PD +T LL AC+
Sbjct: 375 ---FNR----SLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHS 427
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQT-KPDHIT 377
L G I + + Y+ P C L +G LF+ M+ + +PD +
Sbjct: 428 GMLDLGRNIFRSMRQD--YNITPKLEHYGCMIDLLGHSG-LFKEAEEMINTMPMEPDGVI 484
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMK 403
+ ++ AC +LE+G ++K
Sbjct: 485 WCSLLKACKIHGNLELGESFAKKLIK 510
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 20 DAFELCMLLDQAGEVVDS-FLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRI 78
D + C +D A +V DS R W+ +F ++ A AFD I
Sbjct: 355 DMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFA----MHGRANAAFDIFSRMRKNGI 410
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDAR 135
P T+ L+SACS L LGR + + P + ++++ G G ++A
Sbjct: 411 EPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAE 470
Query: 136 MVFDEMP-QRNVVSWTAMIAGCSQNGQ 161
+ + MP + + V W +++ C +G
Sbjct: 471 EMINTMPMEPDGVIWCSLLKACKIHGN 497
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 187/598 (31%), Positives = 310/598 (51%), Gaps = 66/598 (11%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A ++ N + +P+ T+A ++S C+S + G ++H ++S D ++ N ++
Sbjct: 57 AVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVA 116
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY K G L DA +F+ MP NVV+W MIAG QNG + A L+ +M+ +G+ PD T
Sbjct: 117 MYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSIT 176
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F S + + + + G+++H ++++ + ++ALI +Y K + A +F
Sbjct: 177 FASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQST 236
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
DI ++I G+ V N + N+A+ +F + +
Sbjct: 237 NVDIVVCTAIISGY--------VLNGLN--------------------NDALEIFRWLLE 268
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------ 357
++ P+ +T+ S+L AC +L G ++H+ I+K G V +AI+ A
Sbjct: 269 EKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDL 328
Query: 358 --ELFR----------------------------LFSLMLASQTKPDHITFNDVMGACAA 387
++FR LF M D ++ + + ACA
Sbjct: 329 AYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACAN 388
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ +L G +H +++K +VF + L+DMY KCG+L AR +F+ M + + VSW+S+
Sbjct: 389 LPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSI 448
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I Y G E +L LF +M G++P+HVT + +L+AC H G V++G+Q +R M EYG
Sbjct: 449 IAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYG 508
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
I E +C+VDL RAGR++EA + I M F D VW +LL +C+ HGNV++ + A+
Sbjct: 509 IPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVAS 568
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+L +DP NS VLL N++A +G+W V ++ MK+RGV+KVPG SWIE+ H
Sbjct: 569 RCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTH 626
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 243/513 (47%), Gaps = 76/513 (14%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D + + ++ +Y + G +EDAR +FD+MP ++ V W M+ G + G+ N+A++++ M
Sbjct: 6 DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
P+ TF S++ C+ G QLH VI + NAL+AMY+KF ++
Sbjct: 66 NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
DA +F+++ ++ +W MI GF + F +E
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGF----------------------------MDE 157
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV-------- 345
A LFSEM + PD +T S L + T SL QG +IH YI++ G +V
Sbjct: 158 ASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALID 217
Query: 346 -----------------------PVCNAI--------LQHQAGELFRLFSLMLASQTKPD 374
VC AI L + A E+FR +L + P+
Sbjct: 218 IYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFR---WLLEEKMSPN 274
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+T V+ ACA +A+L +G +LH I+K GL V + +MDMY KCG L A ++F
Sbjct: 275 AVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFR 334
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
M + D V W+++I +Q G +EA+ LFR+M G+ + V++ L+AC+++ +
Sbjct: 335 RMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHH 394
Query: 495 GLQLYRIMQNEYGIIPTRE-RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
G ++ M G + S ++D+ + G + A + M + + V W S++A+
Sbjct: 395 GKAIHSFMIK--GAFDSEVFAESALIDMYGKCGNLSVARCVFDMMR-EKNEVSWNSIIAA 451
Query: 554 CKTHGNVDVGKRAAENILK--IDPTNSAALVLL 584
+HG+++V +L+ I P + L +L
Sbjct: 452 YGSHGHLEVSLALFHKMLEDGIQPDHVTFLTIL 484
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G +D FV + L+ +Y + G + AR LF+ M + D V W+ ++ G+ + G A+K+F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLA 523
MR+ +PN +T VL+ C+ L E G QL+ ++ + P + +V + +
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVA--NALVAMYS 119
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ G++ +A N M D ++V W ++A +G +D
Sbjct: 120 KFGQLSDALKLFNTMP-DTNVVTWNGMIAGFVQNGFMD 156
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 306/581 (52%), Gaps = 66/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +++ L SL LG++VH L + N ++NMY K + AR VF+ M
Sbjct: 324 TFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNM 383
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC-CVGLG 200
+R+++SW ++IAG +Q+ E A+ L++Q+L+ GL PD +T S+++A S L + L
Sbjct: 384 SERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLS 443
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H H IK+ + + ALI Y++ +R + V
Sbjct: 444 KQIHVHAIKTNNVADSFVSTALIDAYSR-NRCMKEAEVL--------------------- 481
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
F R F+ L +WN +++G + ++ + LF+ M + D T+ ++L C
Sbjct: 482 -FGRNNFD------LVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTC 534
Query: 321 TSPLSLYQGMQIHSYIIKKGF--------------------------YSNVPVCN----- 349
++ QG Q+H+Y IK G+ + ++PV +
Sbjct: 535 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 594
Query: 350 -----AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
I + +FS M PD T + A + + +LE G Q+H +K
Sbjct: 595 TLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL 654
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
D FV L+DMY KCGS+ A LF +E ++ +W++++VG AQ G G+EAL+LF
Sbjct: 655 NCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLF 714
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
++M S G++P+ VT +GVL+ACSH GLV E + R M +YGI P E SC+ D L R
Sbjct: 715 KQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGR 774
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG V EAE+ I+ M+ + ++++LLA+C+ G+ + GKR A +L+++P +S+A VLL
Sbjct: 775 AGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLL 834
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+YA++ KW+E+ MK V+K PG SWIE++ KIH
Sbjct: 835 SNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 875
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 155/595 (26%), Positives = 262/595 (44%), Gaps = 103/595 (17%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
EA + F L+ + + R T + ++ C + H + D +
Sbjct: 134 KEAFLLFRILRQDVVYTSR-MTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGA 192
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++N+Y K G +++ R++F+EMP R+VV W M+ + G + AI+L SGL P+
Sbjct: 193 LVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPN 252
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKS-EHG------SHLISQNALIAMYT---KFD 230
+ T + R G A +KS E+G S +IS+N +++ Y ++
Sbjct: 253 EITLRLLSRIS--------GDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYS 304
Query: 231 RILDAWN----------------VFSSIARKDITSWG--------------------SMI 254
+L + V ++ R D + G S+I
Sbjct: 305 ALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLI 364
Query: 255 DGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
+ + KL ARTVFN M +L SWN++IAG+A EA+ LF ++ L PD
Sbjct: 365 NMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHY 424
Query: 312 TVRSLLCACTS-PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------- 353
T+ S+L A +S P L QIH + IK ++ V A++
Sbjct: 425 TMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR 484
Query: 354 ------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
H + LF+LM + D T V+ C + ++ G
Sbjct: 485 NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGK 544
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H Y +K+G LD++V +G++DMYVKCG + +A+ F+ + PD V+W++LI G + G
Sbjct: 545 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENG 604
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER- 514
E AL +F +MR GV P+ T+ + A S + +E+G Q++ N + T +
Sbjct: 605 EEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH---ANALKLNCTSDPF 661
Query: 515 -RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
+ +VD+ A+ G + +A ++ +I W ++L HG GK A +
Sbjct: 662 VGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE---GKEALQ 712
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 223/480 (46%), Gaps = 59/480 (12%)
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
S L LG+ H IL+ + P+ L N++++MY KCGSL AR VFD+MP+R++VSW +
Sbjct: 58 STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNS 117
Query: 152 MIAGCSQNGQ---ENA--AIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGLGRQLH 204
++A +Q+ + EN A L+ + Q + + T +++ C SG C H
Sbjct: 118 ILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA--SESFH 175
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ K AL+ +Y KF ++ + +F + +D+ W M+ + ++ F
Sbjct: 176 GYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGF-- 233
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
EA+ L S L P+ +T+R LL +
Sbjct: 234 --------------------------KEEAIDLSSAFHTSGLHPNEITLR-LLSRISGDD 266
Query: 325 SLYQGMQIHSY-------IIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
S + Q+ S+ + + N + + Q L + F M+ S + D +T
Sbjct: 267 S--EAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVT 324
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F V+ + SL +G Q+HC +K GL L + V N L++MY K +G AR +FN M
Sbjct: 325 FILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMS 384
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ D++SW+S+I G AQ EA+ LF ++ G++P+H T+ VL A S + EGL
Sbjct: 385 ERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS---LPEGLS 441
Query: 498 LYRIMQNEYGIIPTRE-----RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
L + Q I T + ++D +R + EAE + F D+V W ++++
Sbjct: 442 LSK--QIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF--DLVAWNAMMS 497
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 323/627 (51%), Gaps = 71/627 (11%)
Query: 42 FDDIWDFDLFSSLCKQNLYNE-----ALVAFDFLQNNTNFRIRPS--TYADLISACSSLR 94
FD I + D+ S C N Y++ + + Q I P+ T++ + +A S+L
Sbjct: 66 FDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLS 125
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
S+ G++ H + C D + + +LNMY K G L +AR VFD MP+RN V+W MI+
Sbjct: 126 SIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMIS 185
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
G + A E++ M + ++F F S++ A + V G+Q+H +K+
Sbjct: 186 GYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLV 245
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
L NAL+ MY K + D+ VF K+ +W +M
Sbjct: 246 FLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAM--------------------- 284
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
I G A ++++A+ LFS M + P T+ +L AC+ ++ +G Q+H+
Sbjct: 285 -------ITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHN 337
Query: 335 YIIKKGFYSNVPVCNAI-------------------LQH--------------QAGE--- 358
Y++K GF S + + A+ LQ Q GE
Sbjct: 338 YLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENED 397
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
L+ M P+ +T V+ AC+ +A+ + G Q+H +K GL L+V + + L
Sbjct: 398 ALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALST 457
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY KCG+L +F M + D++SW+++I G +Q G G+EAL+LF MR +P+ VT
Sbjct: 458 MYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVT 517
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
V VL+ACSH+GLV+ G +R+M +E+G++P E +C+VD+L+RAG+++EA++FI
Sbjct: 518 FVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIEST 577
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
D + +W+ LL +C+ + N ++G A E ++++ S+A VLL IY + G+ E+V
Sbjct: 578 TIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVE 637
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIH 625
R+ MK RGV K PG SWIE+++ +H
Sbjct: 638 RVRSMMKVRGVSKEPGCSWIELKSNVH 664
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 207/649 (31%), Positives = 325/649 (50%), Gaps = 80/649 (12%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
CC +A++L L+ G+VV W + SSL + + EA F+
Sbjct: 165 CCSV-EAWKLLSLVKDGGDVVS---------WT-TMLSSLVENGKWGEA---FEIYVKMI 210
Query: 75 NFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
+ P+ T+ L+ A SS L G+ +H H++ + + VL +++MY KC +
Sbjct: 211 ESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMV 270
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
DA V + P+ +V WT +I+G +QN Q AI ++ M SGL+P+ FT+ S++ A S
Sbjct: 271 DAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASS 330
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ + LG Q H+ VI L NAL+ MY K I
Sbjct: 331 SILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTN----------------- 373
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
A VF E+ SPN+ W ++IAG A ++ LF+EM + P+ T
Sbjct: 374 ----------AVKVFREITSPNVMCWTSLIAGFAE-KRLEDSFQLFAEMQAAGVRPNSFT 422
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLM- 366
+ ++L AC+ SL M +H +IIK ++ V NA++ AG E + + M
Sbjct: 423 MSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMN 482
Query: 367 ---------LASQ---------------------TKPDHITFNDVMGACAAMASLEMGTQ 396
LA++ K D + + A A + ++E G Q
Sbjct: 483 LRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQ 542
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LHCY +K+G V N L+ +Y KCGS+ A F + +PD SW+ LI G++ G
Sbjct: 543 LHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGL 602
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
AL F MR +GV+P+ +TL+ +++ACSH GL+E GL+ + MQ EY I P +
Sbjct: 603 ISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYM 662
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL R GR+ EA I +M+F D ++ K+LL +C HGNV +G+ A L++DP+
Sbjct: 663 CLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPS 722
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ A +LL N+Y ++G + + M+ERG+R+ PGQ W+EI++++H
Sbjct: 723 DPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVH 771
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 257/555 (46%), Gaps = 75/555 (13%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD++ + D + SS K +++AL FD + + + T + + +C +L
Sbjct: 72 FDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYP-NEFTLSSALRSCFALGE 130
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG--SLEDARMVFDEMPQRNVVSWTAMI 153
+ G ++H + + + + ++ Y KCG S+E +++ +VVSWT M+
Sbjct: 131 FERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTML 190
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+ +NG+ A E+YV+M++SG+ P++FTF ++ A S + G+ LHAH+I
Sbjct: 191 SSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAE 250
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+L+ + A++ MY+K R++DA V + D+ W ++I GF++
Sbjct: 251 LNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQ-------------- 296
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
NL EA+S+F +M L+P+ T SLL A +S LSL G Q H
Sbjct: 297 NL--------------QVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFH 342
Query: 334 SYIIKKGFYSNVPVCNAIL------------------------------------QHQAG 357
S +I G ++ + NA++ + +
Sbjct: 343 SRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLE 402
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
+ F+LF+ M A+ +P+ T + ++GAC+ SL LH +I+KT + +D+ V N L+
Sbjct: 403 DSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALV 462
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
D Y G + A + M D ++++ L Q G ALK+ M + G++ +
Sbjct: 463 DTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEF 522
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
+L L+A + +G +E G QL+ + G + +V L ++ G +H+A
Sbjct: 523 SLASFLSAAAGLGTMETGKQLH-CYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKD 581
Query: 538 MAFDDDIVVWKSLLA 552
++ + D W L++
Sbjct: 582 IS-EPDAFSWNGLIS 595
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 236/499 (47%), Gaps = 70/499 (14%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++S C+S SL+ G +H I+ Q D L N++L++Y K + AR +FDEMP R+
Sbjct: 21 VLSFCNS-NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRD 79
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VVSWT +++ ++ + A++L+ M+ SG P++FT S +R+C L G Q+H
Sbjct: 80 VVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHC 139
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRI-LDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+K + +L+ YTK ++AW + S + DG
Sbjct: 140 SAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVK-----------DG-------- 180
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
++ SW T+++ + EA ++ +M + + P+ T LL A +S L
Sbjct: 181 --------GDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFL 232
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------------------ 354
L G +H+++I G N+ + A++
Sbjct: 233 GLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLIS 292
Query: 355 ------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
Q E +F M S P++ T++ ++ A +++ SL++G Q H ++ GL
Sbjct: 293 GFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLED 352
Query: 409 DVFVMNGLMDMYVKCGSLGS-ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D+++ N L+DMY+KC + + A ++F + P+V+ W+SLI G+A+ E++ +LF M
Sbjct: 353 DLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEM 411
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAG 526
+++GVRPN T+ +L ACS + + L+ I++ + I + +VD A G
Sbjct: 412 QAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDI--DIAVANALVDTYAGVG 469
Query: 527 RVHEAEDFINQMAFDDDIV 545
+ EA I M D I
Sbjct: 470 MIDEAWSVIGTMNLRDSIT 488
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
SL+ G +H I+K GL D+++ N L+ +Y K + AR LF+ M + DVVSW++++
Sbjct: 29 SLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILS 88
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
+ + +AL+LF M SG PN TL L +C +G E G+Q++ + G+
Sbjct: 89 SHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIH-CSAVKLGLE 147
Query: 510 PTRERRSCVVDLLARAGRVH-EAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
R + +V+ + G EA ++ + D+V W ++L+S +G
Sbjct: 148 MNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGK 198
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 190/587 (32%), Positives = 311/587 (52%), Gaps = 53/587 (9%)
Query: 67 FDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM-- 124
+ LQN+ + L+S C S ++L +++H I+ + + ++
Sbjct: 27 YKLLQNHPSL--------TLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCA 75
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
G+L A ++F+ + Q N W MI G S + AI+ YV+ML G+ P+ +TF
Sbjct: 76 ISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTF 135
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
++++C+ + G+Q+H HV+K S +LI MY + + A VFS +
Sbjct: 136 PFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSL 195
Query: 245 KDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+D S+ ++I G++ LD AR +F E+ + SWN +IAG A EA++ F EM
Sbjct: 196 RDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM 255
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------- 353
+ P+ T+ ++L AC SL G + S+I G SN+ + NA++
Sbjct: 256 KRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDL 315
Query: 354 HQAGELFR----------------------------LFSLMLASQTKPDHITFNDVMGAC 385
+A +LF LF M S +P+ +TF ++ AC
Sbjct: 316 DKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPAC 375
Query: 386 AAMASLEMGTQLHCYIMKTGLAL-DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
A + +L++G +H YI K L L + + L+DMY KCG++ +A+++F M+ + SW
Sbjct: 376 AYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW 435
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+++I G A G AL+LFR+MR G P+ +T VGVL+ACSH GLVE G Q + M
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE 495
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+Y I P + C++DLL RAG EAE + M D +W SLL +C+ HGNV++G+
Sbjct: 496 DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGE 555
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
AA+++ +++P N A VLL NIYA++G+W++VAR+ + ++G++K
Sbjct: 556 FAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 171/373 (45%), Gaps = 38/373 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A + + R W+ + + + + EAL F ++ N ST ++
Sbjct: 214 LDDARRLFEEIPVRDAVSWN-AMIAGYAQSGRFEEALAFFQEMKR-ANVAPNESTMVTVL 271
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ SL+LG V I + L N +++MY KCG L+ AR +F+ + +++++
Sbjct: 272 SACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDII 331
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW MI G S A+ L+ +M QS + P+ TF SI+ AC+ L + LG+ +HA++
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391
Query: 208 IKSEHG-SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
K G ++ +LI MY K I A VF+ + K + SW
Sbjct: 392 DKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW---------------- 435
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
N +I+G+A +AN A+ LF +M D PD +T +L AC+ +
Sbjct: 436 ------------NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLV 483
Query: 327 YQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
G Q S +++ Y P C L +AG +LM + KPD + +
Sbjct: 484 ELGRQCFSSMVED--YDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSL 541
Query: 382 MGACAAMASLEMG 394
+GAC ++E+G
Sbjct: 542 LGACRVHGNVELG 554
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 201/615 (32%), Positives = 307/615 (49%), Gaps = 81/615 (13%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHD 104
IW+ + L+ EA + F + R T+ +I AC L +L +G+KVH
Sbjct: 91 IWNV-IIRGYTNNGLFQEA-IDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHG 148
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
++ D + N +++MY K G +E A VFDEMP R++VSW +M++G +G +
Sbjct: 149 KLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLS 208
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
++ + +ML+ G D+F S + ACS C+ G ++H VI+SE ++ Q +LI
Sbjct: 209 SLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLID 268
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY K K+D+A VFN + S N+ +WN +I G
Sbjct: 269 MYGKC----------------------------GKVDYAERVFNRIYSKNIVAWNAMIGG 300
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS- 343
+ D ++IPD +T+ +LL +C+ +L +G IH + I+K F
Sbjct: 301 MQE---------------DDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPY 345
Query: 344 -----------------------------------NVPVCNAILQHQAGELFRLFSLMLA 368
N V + Q E ++F +L
Sbjct: 346 LVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILN 405
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
KPD IT V+ A A +AS G Q+H YIMK GL + F+ N ++ MY KCG L +
Sbjct: 406 EPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQT 465
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
ARE F+ M DVVSW+++I+ YA G G +++ F MR G +PN T V +LTACS
Sbjct: 466 AREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSI 525
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GL++EG + M+ EYGI P E C++DLL R G + EA+ FI +M +W
Sbjct: 526 SGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWG 585
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
SLLA+ + H +V + + AA +IL + N+ VLL N+YA +G+WE+V R+ MKE+G
Sbjct: 586 SLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQG 645
Query: 609 VRKVPGQSWIEIQTK 623
+ K G S ++I +
Sbjct: 646 LVKTVGCSMVDINGR 660
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 198/638 (31%), Positives = 313/638 (49%), Gaps = 67/638 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFD-DIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
C L D A V D+ + +W+ L + K +Y EAL F+ L + + TY
Sbjct: 51 CHLYDHAKCVFDNMENPCEISLWN-GLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTY 109
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
+ AC L LG+ +H ++ + D V+ + ++ MYGKC + E A +F+EMP+
Sbjct: 110 PSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPE 169
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++V W +I+ Q+G A+E + M + G P+ T + I +C+ L + G ++
Sbjct: 170 KDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEI 229
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +I S +AL+ MY K L+ A
Sbjct: 230 HEELINSGFLLDSFISSALVDMYGKC----------------------------GHLEMA 261
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
+F +M + +WN++I+G + + LF M + + P T+ SL+ C+
Sbjct: 262 IEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRS 321
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------------------- 354
L +G +H Y I+ +V V ++++
Sbjct: 322 ARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMI 381
Query: 355 ----QAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
G+LF LFS M S + D ITF V+ AC+ +A+LE G ++H I++ L
Sbjct: 382 SGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLD 441
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+ VM L+DMY KCG++ A +F + D+VSW+S+I Y G AL+LF M
Sbjct: 442 NNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEM 501
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
S V+P+ V + +L+AC H GLV+EG + M N YGIIP E SC++DLL RAGR
Sbjct: 502 LQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGR 561
Query: 528 VHEAEDFINQMA-FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+HEA + + Q DD+ + +L ++C+ H N+D+G A ++ DP +S+ +LL N
Sbjct: 562 LHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSN 621
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
+YAS+ KW+EV + MKE G++K PG SWIEI KI
Sbjct: 622 MYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKI 659
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 236/512 (46%), Gaps = 68/512 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+ AC + +SL+ G+ +H +++ Q D L ++N Y C + A+ VFD M
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 146 VVS-WTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+S W ++AG ++N A+EL+ ++L L PD +T+ S+ +AC GL LG+ +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H +IK+ ++ ++L+ MY K + A +F+ + KD+
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDV---------------- 172
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
A WNT+I+ N +A+ F M P+ +T+ + + +C
Sbjct: 173 ------------ACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARL 220
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF--------------- 360
L L +GM+IH +I GF + + +A++ A E+F
Sbjct: 221 LDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMI 280
Query: 361 -------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+LF M KP T + ++ C+ A L G +H Y ++ +
Sbjct: 281 SGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQ 340
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
DVFV + LMD+Y KCG + A ++F + VVSW+ +I GY G EAL LF M
Sbjct: 341 PDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEM 400
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
R S V + +T VLTACS + +E+G +++ ++ E + ++D+ A+ G
Sbjct: 401 RKSYVESDAITFTSVLTACSQLAALEKGKEIHNLII-EKKLDNNEVVMGALLDMYAKCGA 459
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
V EA + D+V W S++ + +HG+
Sbjct: 460 VDEAFSVFKCLP-KRDLVSWTSMITAYGSHGH 490
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 330/636 (51%), Gaps = 44/636 (6%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A ++ D +R W+ + SS K ++EAL + + ++ ++ ST++ ++
Sbjct: 48 LDVARQLFDQMPQRTVVSWN-TMISSYSKHGRFSEALFLV-YSMHRSHMKLSESTFSSVL 105
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-------- 139
S C+ LR L+ G+ +H +L S + ++ + +L Y C + +AR VFD
Sbjct: 106 SVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEV 165
Query: 140 -----------------------EMPQRNVVSWTAMIAGCSQNGQE-NAAIELYVQMLQS 175
+MP+R+VV+WT +I+G S+NG A+E++ M++S
Sbjct: 166 LWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRS 225
Query: 176 G-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
G P++FTF ++RAC L + +GR +H ++K AL+ Y + + I D
Sbjct: 226 GETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDD 285
Query: 235 AWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
A V + + + S+I+G +++ A VFN M N S+N +I G A
Sbjct: 286 ALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQM 345
Query: 292 NEAMSLFSEMGDRELIPDG--LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+++ LF +M R + ++V S L L++ + K N +
Sbjct: 346 DDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNE----KDPVTWNSMISG 401
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
I Q E +L+ M + TF+ + AC+ + SL G LH +++KT +
Sbjct: 402 YIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESN 461
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V+V L+DMY KCGS+ A+ F + P+V +W++LI G+A G G EA+ LF RM
Sbjct: 462 VYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIE 521
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
G+ PN T VGVL+ACS GLV EG++++ M+ Y + PT E +CVVDLL R+G +
Sbjct: 522 QGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIR 581
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
EAE+FI +M + D VVW +LL++C +++VG+R AE + DP ++ V+L NIYA
Sbjct: 582 EAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYA 641
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
G+W E + ++ V+K PG SWIE+ KIH
Sbjct: 642 GLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIH 677
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 217/481 (45%), Gaps = 50/481 (10%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N ++ Y K L+ AR +FD+MPQR VVSW MI+ S++G+ + A+ L M +S +
Sbjct: 36 NIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMK 95
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
+ TF S++ C+ L C+ G+ +H V+KS S + +AL+ Y I +A V
Sbjct: 96 LSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRV 155
Query: 239 FSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVAS----CSNA 291
F + R++ W M+ G+ + +D A +VF +M ++ +W T+I+G + C A
Sbjct: 156 FDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKA 215
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG----------- 340
E L G E P+ T ++ AC L G +H ++K G
Sbjct: 216 LEIFRLMMRSG--ETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGAL 273
Query: 341 --FYSN-------VPVCNAILQHQAGELFRLF------------SLMLASQTKPDHITFN 379
FY + VC ++ L L L+ T+ + +++N
Sbjct: 274 VEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYN 333
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-D 438
++ A ++ +L + +F N ++ +Y + G + A ELF + +
Sbjct: 334 LMIKGYAVGGQMDDSKRL----FEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNE 389
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D V+W+S+I GY G EEALKL+ M ++ T + ACS +G + +G QL
Sbjct: 390 KDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQG-QL 448
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE-DFINQMAFDDDIVVWKSLLASCKTH 557
+ + ++D+ ++ G + EA+ F++ F ++ W +L+ H
Sbjct: 449 LHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVS--IFSPNVAAWTALINGHAYH 506
Query: 558 G 558
G
Sbjct: 507 G 507
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 177/474 (37%), Gaps = 133/474 (28%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQ-NLYNEALVAFDFLQNNTNFRIRPSTY 83
C ++D A V RR W L S K + +AL F + + T+
Sbjct: 177 CNVMDDALSVFVKMPRRDVVAWT-TLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTF 235
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC--------------- 128
++ AC L L +GR VH ++ + D + ++ Y +C
Sbjct: 236 DCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVN 295
Query: 129 ----------------GSLEDARMVFDEMPQRNVVSWTAMIAG----------------- 155
G +EDA +VF+ M + N VS+ MI G
Sbjct: 296 PCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKM 355
Query: 156 --------------CSQNGQENAAIEL--------------------------------Y 169
S+NG+ + A+EL Y
Sbjct: 356 PCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLY 415
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ M + + Q TF ++ ACS L + G+ LHAH+IK+ S++ +LI MY+K
Sbjct: 416 ITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKC 475
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
I++A F SI ++ +W ++I+G + G+ S
Sbjct: 476 GSIMEAQTSFVSIFSPNVAAWTALINGHA-----------------------YHGLGS-- 510
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI-HSYIIKKGFYSNVPV- 347
EA+SLF M ++ L P+G T +L AC+ + +GM+I HS + YS P
Sbjct: 511 ---EAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSM---ERCYSVTPTL 564
Query: 348 ----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
C L ++G + + + D + + ++ AC LE+G ++
Sbjct: 565 EHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERV 618
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 160/386 (41%), Gaps = 82/386 (21%)
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
SKLD AR +F++M + SWNT+I+ + +EA+ L M + T S+L
Sbjct: 46 SKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVL 105
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTK 372
C L G IH ++K G S V +A+L A GE R+F ++
Sbjct: 106 SVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVL------ 159
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+ N+V+ + +M G YV C + A +
Sbjct: 160 ---VRRNEVLWS----------------LMLVG--------------YVTCNVMDDALSV 186
Query: 433 FNFMEDPDVVSWSSLIVGYAQF--GCGEEALKLFR-RMRSSGVRPNHVTLVGVLTACSHV 489
F M DVV+W++LI G+++ GCG +AL++FR MRS PN T V+ AC +
Sbjct: 187 FVKMPRRDVVAWTTLISGFSKNGDGCG-KALEIFRLMMRSGETTPNEFTFDCVVRACGRL 245
Query: 490 GLVEEGLQLYRIMQN---EY--------------------------GII-PTRERRSCVV 519
G++ G ++ ++ EY G++ P + ++
Sbjct: 246 GILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLI 305
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+ L GR+ +AE N M + + V + ++ G +D KR E + +S
Sbjct: 306 EGLISMGRIEDAELVFNGMT-EMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSN 364
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMK 605
++ ++Y+ +G+ ++ L K
Sbjct: 365 TMI---SVYSRNGEIDKALELFEETK 387
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++ N + Y K L AR+LF+ M VVSW+++I Y++ G EAL L M
Sbjct: 31 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 90
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEG 495
S ++ + T VL+ C+ + + +G
Sbjct: 91 RSHMKLSESTFSSVLSVCARLRCLRDG 117
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 322/614 (52%), Gaps = 75/614 (12%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+I STYA L+ +C R+L LG++VH H L + + +L MYG+ G L+DA +
Sbjct: 59 QIDSSTYASLLESC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANL 115
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF +MPQRN+ SWTA+++ +G A+ L+ ++ + + F F +++ C GL
Sbjct: 116 VFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRV 175
Query: 197 VGLGRQLHAHVIK--SEHGSHL-----------ISQNALIAMYTKFDRILDAWNVFS--S 241
+ LGRQLH VIK ++ GS L +S N +I Y + + A +F
Sbjct: 176 LELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQME 235
Query: 242 IARKDITSWGSMIDGFSK---LDFARTVFN--------EMESPNLAS------------- 277
+ KD SW SMI G++ D A ++F E +S L S
Sbjct: 236 LVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRR 295
Query: 278 --------------WNTIIAGV-----ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
WNT + G + C + A F + +R+ + + C
Sbjct: 296 GKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYAC 355
Query: 319 --ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----QHQAGEL-FRLFSLMLASQT 371
+ +L Q M+ GF NV N I+ ++ EL RLF+ M S
Sbjct: 356 CNQLENIQNLIQKMK------GDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSL 409
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+PD T ++ ACA +A++ G Q+H + ++ G LDV + L+DMY KCGS+ A +
Sbjct: 410 RPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQ 469
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
++N + +P++VS ++++ YA G G+E + LFR M +G RP+HVT + VL++C H G
Sbjct: 470 VYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGA 529
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
VE G + + +M Y + P+ + +C+VDLL+RAGR+ EA + + ++ D V+W +LL
Sbjct: 530 VETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALL 588
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
C GNV++G+ AAE++++++P N+ VLL N+YA +G+W ++ R +K+RG+ K
Sbjct: 589 GGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHK 648
Query: 612 VPGQSWIEIQTKIH 625
PG SWIE + IH
Sbjct: 649 SPGCSWIEDREDIH 662
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 167/408 (40%), Gaps = 72/408 (17%)
Query: 28 LDQAGEVVDSF-LRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
+++A E+ D L D I + S L++EAL F L T +
Sbjct: 224 VEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSV 283
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR-- 144
++AC+ + SL+ G++VH + + + ++ MY KC L+ A++ FD + +R
Sbjct: 284 LAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDT 343
Query: 145 ---------------------------------NVVSWTAMIAGCSQNGQENAAIELYVQ 171
NV +W +I+G +NG A+ L+ +
Sbjct: 344 ATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTE 403
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M S L PD +T G I+ AC+ L + G+Q+HAH I+ + + AL+ MY K
Sbjct: 404 MQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGS 463
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
I A V +N + +PNL S N ++ A +
Sbjct: 464 IKHAMQV----------------------------YNRISNPNLVSQNAMLTAYAMHGHG 495
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP----- 346
+E ++LF M PD +T S+L +C ++ G H + +Y+ P
Sbjct: 496 DEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETG---HEFFDLMTYYNVTPSLKHY 552
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
C L +AG L + L+ KPD + + ++G C ++E+G
Sbjct: 553 TCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELG 600
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 282/531 (53%), Gaps = 64/531 (12%)
Query: 97 QLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
Q GR IL + +P V N ++ Y + G + +A+ +FD+MP RN +SW MIAG
Sbjct: 334 QCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAG 393
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+QNG+ A+ L ++ +SG++P + SI ACS + + G Q+H+ +K +
Sbjct: 394 YAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFN 453
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ NALI MY K +++AR VF+ M + ++
Sbjct: 454 SFACNALITMYGKC----------------------------RNMEYARQVFSRMVTKDI 485
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWN+ +A + +EA + F M R+ + + T+ +S Y +
Sbjct: 486 VSWNSFLAALVQNDLLDEARNTFDNMLSRDDV-----------SWTTIISAYAHAE---- 530
Query: 336 IIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
Q+ E F M P+ ++G C ++ + ++G
Sbjct: 531 -------------------QSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQ 571
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H +K G+ ++ V N L+ MY KCG S R +F+ ME+ D+ +W+++I GYAQ G
Sbjct: 572 QIHTVAIKLGMDSELIVANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQHG 630
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G EA+K+++ M S+GV PN VT VG+L ACSH GLV+EG + ++ M +YG+ P E
Sbjct: 631 LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY 690
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VDLL R G V AE FI M + D V+W +LL +CK H N ++GKRAAE + +I+P
Sbjct: 691 ACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEP 750
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+N+ V+L NIY+S G W EVA + MK++GV K PG SW +I+ K+H+
Sbjct: 751 SNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHS 801
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 241/513 (46%), Gaps = 50/513 (9%)
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
G+ G + +AR VFD MP+R++++W +MI+ NG +AA +LY + G M G
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGGNMRT----G 99
Query: 186 SIIRACSGLCCVGLGRQLHA-HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+I+ + G LGR L A V + ++ NA+I+ Y + I A +F ++
Sbjct: 100 AILLSGYGR----LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPS 155
Query: 245 KDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+D++SW SM+ G+ ++ AR +F +M NL SW +I+G N +A +F +M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFR 361
L+PD S L A +L + +K GF +V + AIL + +
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 362 LFSLM--LASQTKPDHITFNDVMGAC-------AAMASLEMG--TQLHCYI-MKTGLA-- 407
L + + S + + T++ ++ A AA+A E + C + TGLA
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQC 335
Query: 408 --LD-------------VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+D V N L+ Y++ G + A+ELF+ M + +SW+ +I GYA
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
Q G EEAL L + + SG+ P+ +L + ACS++ +E G Q++ + + G
Sbjct: 396 QNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV-KVGCQFNS 454
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ ++ + + + A ++M DIV W S LA+ + +D + +N+L
Sbjct: 455 FACNALITMYGKCRNMEYARQVFSRMV-TKDIVSWNSFLAALVQNDLLDEARNTFDNMLS 513
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
D + ++ + YA + E+ MG+ K
Sbjct: 514 RDDVSWTTII---SAYAHA---EQSNEAMGAFK 540
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 152/682 (22%), Positives = 268/682 (39%), Gaps = 144/682 (21%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
+A EV D+ RR W+ + S+ C + + A +D + N R T A L+S
Sbjct: 52 EAREVFDAMPRRDIIAWN-SMISAYCHNGMPDAARDLYDAISGG-NMR----TGAILLSG 105
Query: 90 CSSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILN------------------------M 124
L + R+V D +L +A++ ++ N +
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSML 165
Query: 125 YGKCGSLE--DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
G C SL+ DAR +F++MP+RN+VSWT MI+G + A +++ +M + GL+PDQ
Sbjct: 166 TGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQS 225
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD-AWNVFSS 241
F S + A GL + + L +K+ ++ A++ +Y++ +LD A F S
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 242 IARKDITSWGSMIDGFS----------------------------------KLDFARTVF 267
+ ++ +W +MI S ++D AR +F
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE---------------------- 305
++ P + SWN +I G NEA LF +M R
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 306 ---------LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
++P ++ S+ AC++ ++L G Q+HS +K G N CNA++
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALIT--- 462
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
+ G C M E Q+ ++ D+ N
Sbjct: 463 ------------------------MYGKCRNM---EYARQVFSRMVTK----DIVSWNSF 491
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+ V+ L AR F+ M D VSW+++I YA EA+ F+ M PN
Sbjct: 492 LAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNS 551
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
L +L C +G + G Q++ + + G+ + ++ + + G F
Sbjct: 552 PILTILLGVCGSLGASKIGQQIHTVAI-KLGMDSELIVANALISMYFKCGCADSRRIF-- 608
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT----NSAALVLLCNIYASSG 592
+ + DI W +++ HG +G+ A + ++ N V L N + +G
Sbjct: 609 DLMEERDIFTWNTIITGYAQHG---LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAG 665
Query: 593 KWEEVARLMGSM-KERGVRKVP 613
+E + SM ++ G+ +P
Sbjct: 666 LVDEGWKFFKSMSQDYGLTPLP 687
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 282/531 (53%), Gaps = 64/531 (12%)
Query: 97 QLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
Q GR IL + +P V N ++ Y + G + +A+ +FD+MP RN +SW MIAG
Sbjct: 334 QCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAG 393
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+QNG+ A+ L ++ +SG++P + SI ACS + + G Q+H+ +K +
Sbjct: 394 YAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFN 453
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ NALI MY K +++AR VF+ M + ++
Sbjct: 454 SFACNALITMYGKC----------------------------RNMEYARQVFSRMVTKDI 485
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWN+ +A + +EA + F M R+ + + T+ +S Y +
Sbjct: 486 VSWNSFLAALVQNDLLDEARNTFDNMLSRDDV-----------SWTTIISAYAHAE---- 530
Query: 336 IIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
Q+ E F M P+ ++G C ++ + ++G
Sbjct: 531 -------------------QSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQ 571
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H +K G+ ++ V N L+ MY KCG S R +F+ ME+ D+ +W+++I GYAQ G
Sbjct: 572 QIHTVAIKLGMDSELIVANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQHG 630
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G EA+K+++ M S+GV PN VT VG+L ACSH GLV+EG + ++ M +YG+ P E
Sbjct: 631 LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY 690
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VDLL R G V AE FI M + D V+W +LL +CK H N ++GKRAAE + +I+P
Sbjct: 691 ACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEP 750
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+N+ V+L NIY+S G W EVA + MK++GV K PG SW +I+ K+H+
Sbjct: 751 SNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHS 801
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 241/513 (46%), Gaps = 50/513 (9%)
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
G+ G + +AR VFD MP+R++++W +MI+ NG +AA +LY + G M G
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGGNMRT----G 99
Query: 186 SIIRACSGLCCVGLGRQLHA-HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+I+ + G LGR L A V + ++ NA+I+ Y + I A +F ++
Sbjct: 100 AILLSGYGR----LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPS 155
Query: 245 KDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+D++SW SM+ G+ ++ AR +F +M NL SW +I+G N +A +F +M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFR 361
L+PD S L A +L + +K GF +V + AIL + +
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 362 LFSLM--LASQTKPDHITFNDVMGAC-------AAMASLEMG--TQLHCYI-MKTGLA-- 407
L + + S + + T++ ++ A AA+A E + C + TGLA
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQC 335
Query: 408 --LD-------------VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+D V N L+ Y++ G + A+ELF+ M + +SW+ +I GYA
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
Q G EEAL L + + SG+ P+ +L + ACS++ +E G Q++ + + G
Sbjct: 396 QNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV-KVGCQFNS 454
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ ++ + + + A ++M DIV W S LA+ + +D + +N+L
Sbjct: 455 FACNALITMYGKCRNMEYARQVFSRMV-TKDIVSWNSFLAALVQNDLLDEARNTFDNMLS 513
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
D + ++ + YA + E+ MG+ K
Sbjct: 514 RDDVSWTTII---SAYAHA---EQSNEAMGAFK 540
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 152/682 (22%), Positives = 268/682 (39%), Gaps = 144/682 (21%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
+A EV D+ RR W+ + S+ C + + A +D + N R T A L+S
Sbjct: 52 EAREVFDAMPRRDIIAWN-SMISAYCHNGMPDAARDLYDAISGG-NMR----TGAILLSG 105
Query: 90 CSSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILN------------------------M 124
L + R+V D +L +A++ ++ N +
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSML 165
Query: 125 YGKCGSLE--DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
G C SL+ DAR +F++MP+RN+VSWT MI+G + A +++ +M + GL+PDQ
Sbjct: 166 TGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQS 225
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD-AWNVFSS 241
F S + A GL + + L +K+ ++ A++ +Y++ +LD A F S
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 242 IARKDITSWGSMIDGFS----------------------------------KLDFARTVF 267
+ ++ +W +MI S ++D AR +F
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE---------------------- 305
++ P + SWN +I G NEA LF +M R
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 306 ---------LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
++P ++ S+ AC++ ++L G Q+HS +K G N CNA++
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALIT--- 462
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
+ G C M E Q+ ++ D+ N
Sbjct: 463 ------------------------MYGKCRNM---EYARQVFSRMVTK----DIVSWNSF 491
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+ V+ L AR F+ M D VSW+++I YA EA+ F+ M PN
Sbjct: 492 LAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNS 551
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
L +L C +G + G Q++ + + G+ + ++ + + G F
Sbjct: 552 PILTILLGVCGSLGASKIGQQIHTVAI-KLGMDSELIVANALISMYFKCGCADSRRIF-- 608
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT----NSAALVLLCNIYASSG 592
+ + DI W +++ HG +G+ A + ++ N V L N + +G
Sbjct: 609 DLMEERDIFTWNTIITGYAQHG---LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAG 665
Query: 593 KWEEVARLMGSM-KERGVRKVP 613
+E + SM ++ G+ +P
Sbjct: 666 LVDEGWKFFKSMSQDYGLTPLP 687
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 296/546 (54%), Gaps = 30/546 (5%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ Y L+ AC +SL +K+H H L + D+ + + + +Y C + AR +FDE
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P +V+ W +I + NG + AI+LY ML G+ P+++T+ +++ACSGL + G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
++H+H S + AL+ Y K +++A +FSS++ +D+ +
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA----------- 177
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
WN +IAG + ++A+ L +M + + P+ T+ +L C
Sbjct: 178 -----------------WNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC 220
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
L + + ++ + + + E +F +M S PD T
Sbjct: 221 QCLLYARKIFDVMG--VRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLG 278
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V+ AC+ +A+L+ G H Y++ G A D + N L+DMY KCG + ARE+FN M+ D
Sbjct: 279 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 338
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+VSW+++I+GY G G EAL LF + + G++P+ +T + +L++CSH GLV EG +
Sbjct: 339 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 398
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
M ++ I+P E C+VD+L RAG + EA FI M F+ D+ +W +LL++C+ H N+
Sbjct: 399 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 458
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
++G+ ++ I + P ++ VLL NIY+++G+W++ A + + K+ G++K+PG SWIEI
Sbjct: 459 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 518
Query: 621 QTKIHA 626
+HA
Sbjct: 519 NGIVHA 524
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 334/642 (52%), Gaps = 86/642 (13%)
Query: 20 DAFELCMLLDQAGEVVDSFLR---RFDDIWDFDLFSSLCKQNLYNEALVAFDFLQN--NT 74
D + C +DQA V FLR R W + S +++ +++ AF F +
Sbjct: 291 DLYAKCRDMDQA---VKEFLRMPIRNVVSWT-TIISGFVQKD---DSISAFHFFKEMRKV 343
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+I T +++AC+ ++ ++H I + D+ + + ++NMY K G ++ +
Sbjct: 344 GEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLS 403
Query: 135 RMVFDEMPQ-RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
VF EM +N+ W MI+ +Q+G A+EL+ +MLQ GL PD+F S++
Sbjct: 404 ERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDS 463
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L LGR +H +++K I ++T DI+ S+
Sbjct: 464 L---SLGRLIHCYILK-------------IGLFT------------------DISVGSSL 489
Query: 254 IDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+SK L+ + TVF +M + SW ++I G + +A +A+ LF EM E+ PD
Sbjct: 490 FTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQ 549
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV----------------------- 347
+T+ + L AC++ SL +G ++H Y ++ V V
Sbjct: 550 MTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDM 609
Query: 348 --------CNAILQHQAGELFRLFSLMLASQTKP-----DHITFNDVMGACAAMASLEMG 394
C++++ A + +L+L + + D T + V+GA A + SL++G
Sbjct: 610 LPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIG 669
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
TQLH + K GL +V V + L+ MY KCGS+ ++F +E PD++SW+++IV YAQ
Sbjct: 670 TQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQH 729
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G G EALK++ MR G +P+ VT VGVL+ACSH G+VEEG M EYGI P
Sbjct: 730 GKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYH 789
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+C+VDLL R+GR+ EAE FIN M + D ++W LLA+CK HG++++G+ AA+ +++++
Sbjct: 790 YACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELE 849
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
P + A V L NI A G WE+V ++ M+ GV+K PG S
Sbjct: 850 PCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWS 891
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 173/690 (25%), Positives = 295/690 (42%), Gaps = 160/690 (23%)
Query: 39 LRRFD-----DIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNF-RIRPS-------TYAD 85
LR FD ++ +++ S C QN F F + NF ++R S TY
Sbjct: 101 LRLFDKTPHPNVISWNILISGCNQN--------FSFEDSWRNFCKMRFSGFDPNQFTYGS 152
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++SAC++L S G V+ L + + + +++++ K S EDA VF ++ N
Sbjct: 153 VLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCEN 212
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VV W A+I+G +N + A++L+ QM MP+ FTF SI+ AC+ L + GR +
Sbjct: 213 VVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQG 272
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
VIK G + A+I +Y K + A F + +++ SW ++I GF + D + +
Sbjct: 273 WVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSIS 332
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
F+ F EM + T+ S+L ACT P+
Sbjct: 333 AFH----------------------------FFKEMRKVGEKINNYTITSVLTACTEPVM 364
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------------------- 354
+ + +Q+HS+I K GFY + V +A++
Sbjct: 365 IKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMIS 424
Query: 355 ------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
G LF ML +PD + V+ + + SL +G +HCYI+K GL
Sbjct: 425 AFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGRLIHCYILKIGLFT 481
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ V + L MY KCGSL + +F M D D VSW+S+I G+++ E+A++LFR M
Sbjct: 482 DISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREML 541
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR---------------------------- 500
+RP+ +TL LTACS + +E+G +++
Sbjct: 542 LEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIV 601
Query: 501 IMQNEYGIIPTRERRSC--VVDLLARAGRVHEA--------------EDF---------- 534
+ + + ++P +++ SC +V A+ G + +A + F
Sbjct: 602 LARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVA 661
Query: 535 --------------INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
+ +M + ++ V SL+ G++D + E I K D + A
Sbjct: 662 ILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTA 721
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVR 610
+++ YA GK E ++ M++ G +
Sbjct: 722 MIV---SYAQHGKGAEALKVYDLMRKEGTK 748
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 165/599 (27%), Positives = 276/599 (46%), Gaps = 86/599 (14%)
Query: 62 EALVAFD-FLQNNTNFRIRPS-TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
E VA D F Q F + S T++ +++AC++L L+ GR V ++ D +
Sbjct: 228 ENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGT 287
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
I+++Y KC ++ A F MP RNVVSWT +I+G Q +A + +M + G
Sbjct: 288 AIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKI 347
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWN 237
+ +T S++ AC+ + QLH+ + K+ G +L S +ALI MY+K +
Sbjct: 348 NNYTITSVLTACTEPVMIKEAVQLHSWIFKT--GFYLDSNVSSALINMYSKIGVV----- 400
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES-PNLASWNTIIAGVASCSNANEAMS 296
D + VF EMES NLA W +I+ A + A+
Sbjct: 401 -----------------------DLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVE 437
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
LF M L PD S+L S LSL G IH YI+K G ++++ V +++
Sbjct: 438 LFQRMLQEGLRPDKFCSSSVLSIIDS-LSL--GRLIHCYILKIGLFTDISVGSSLFTMYS 494
Query: 353 --------------------------------QHQAGELFRLFSLMLASQTKPDHITFND 380
A + +LF ML + +PD +T
Sbjct: 495 KCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTA 554
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
+ AC+A+ SLE G ++H Y ++ + +V V L++MY KCG++ AR +F+ + D
Sbjct: 555 ALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKD 614
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
S SSL+ GYAQ G E+AL LF +R + + + T+ V+ A + + ++ G QL+
Sbjct: 615 QFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHA 674
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+ + G+ S +V + ++ G + E Q+ D++ W +++ S HG
Sbjct: 675 CV-TKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMIVSYAQHGK- 731
Query: 561 DVGKRAAE--NILKIDPT--NSAALVLLCNIYASSGKWEEVARLMGSM-KERGVRKVPG 614
G A + ++++ + T +S V + + + +G EE + SM KE G+ PG
Sbjct: 732 --GAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIE--PG 786
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 187/432 (43%), Gaps = 70/432 (16%)
Query: 192 SGLCCVGLGRQLHAHVIKSE-HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
SG C + + LHAH +K+ S+ N+L+ Y K + ++ A +F
Sbjct: 56 SGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLF----------- 104
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
++ PN+ SWN +I+G + ++ F +M P+
Sbjct: 105 -----------------DKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQ 147
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN-------------------------- 344
T S+L ACT+ S G ++S +K GF+SN
Sbjct: 148 FTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQD 207
Query: 345 ----------VPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ A+ + LF M P+ TF+ ++ ACAA+ LE G
Sbjct: 208 VLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFG 267
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+ +++K G DVFV ++D+Y KC + A + F M +VVSW+++I G+ Q
Sbjct: 268 RGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQK 327
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
A F+ MR G + N+ T+ VLTAC+ +++E +QL+ + + G
Sbjct: 328 DDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWI-FKTGFYLDSNV 386
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENI 570
S ++++ ++ G V +E +M ++ +W ++++ G+ V++ +R +
Sbjct: 387 SSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEG 446
Query: 571 LKIDPTNSAALV 582
L+ D S++++
Sbjct: 447 LRPDKFCSSSVL 458
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 291/562 (51%), Gaps = 65/562 (11%)
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
++H ++ S L +N G + AR VFDE P+ +V W A+I G S +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
AIE+Y +M SG+ PD FT +++ACSG+ + +G+++H + + S + QN
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
L+A+Y K R+ + AR VF ++ N+ SW +
Sbjct: 209 GLVALYAKCGRV----------------------------EQARIVFEGLDDRNIVSWTS 240
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I+G EA+ +F +M R + PD + + S+L A T L QG IH ++K G
Sbjct: 241 MISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMG 300
Query: 341 F-------------------------------YSNVPVCNAILQHQA-----GELFRLFS 364
NV + NA++ A E LF
Sbjct: 301 LEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQ 360
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
M++ + D IT + ACA + SL++ + YI KT DVFV L+DM+ KCG
Sbjct: 361 EMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCG 420
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
S+ ARE+F+ D DVV WS++IVGY G G++A+ LF M+ +GV PN VT VG+LT
Sbjct: 421 SVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLT 480
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
AC+H GLVEEG +L+ M+ YGI + +CVVDLL R+G ++EA DFI M + +
Sbjct: 481 ACNHSGLVEEGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGV 539
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
VW +LL +CK + +V +G+ AAE + +DP N+ V L N+YASS W+ VA++ M
Sbjct: 540 SVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILM 599
Query: 605 KERGVRKVPGQSWIEIQTKIHA 626
+E+G+ K G S IEI K+ A
Sbjct: 600 REKGLSKDLGYSLIEINGKLQA 621
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 315/608 (51%), Gaps = 72/608 (11%)
Query: 63 ALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
+L F + + R TYA ++ACS L+ G+ VH + + N ++
Sbjct: 97 SLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLV 156
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+MY +CG + AR VFD +R+ VSW A+++G + G ++ + ++ M +SG+ + F
Sbjct: 157 SMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSF 216
Query: 183 TFGSIIRACSGL--CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
GS+I+ C+G + + +H V+K+ S + +A++ MY K + +A +F
Sbjct: 217 ALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFK 276
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA------NEA 294
S+ LD PN+ +N +IAG+ A EA
Sbjct: 277 SV-----------------LD-----------PNVVVFNAMIAGLCRDEAAVGTDVLREA 308
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------------- 341
+SL+SE+ R + P T S++ AC + G QIH ++K F
Sbjct: 309 LSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDL 368
Query: 342 -------------YSNVPVCNAILQHQ------AGELFR----LFSLMLASQTKPDHITF 378
+++VP + + ELF LF +L + KPD T
Sbjct: 369 YLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTI 428
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ VM ACA++A G Q+ C+ K+G + N + MY + G + +A F ME
Sbjct: 429 SSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMES 488
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D+VSWS++I +AQ GC +AL+ F M + V PN +T +GVLTACSH GLV+EGL+
Sbjct: 489 HDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKY 548
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
Y M+ EY + PT + +CVVDLL RAGR+ +AE FI F D+ V+W+SLLASC+ H
Sbjct: 549 YETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHR 608
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+++ G+ A+ I+++ P++SA+ V L NIY +G+ +++ MKERGV+K PG SWI
Sbjct: 609 DMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWI 668
Query: 619 EIQTKIHA 626
E+++ +H+
Sbjct: 669 ELRSGVHS 676
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 226/494 (45%), Gaps = 26/494 (5%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y + +CS+ R VH HI+ + P L N +L Y + G AR + DEMP
Sbjct: 20 YLHHLRSCSAPRH---AAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMP 74
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGR 201
+ N VS+ +I S+ GQ A++E + + +S G+ D+FT+ + + ACS + G+
Sbjct: 75 RTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGK 134
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL- 260
+HA + + N+L++MY + + A VF + +D SW +++ G+ +
Sbjct: 135 AVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAG 194
Query: 261 --DFARTVFNEMESPNLASWNTIIAG--VASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
D VF M + N+ G + C+ +++ + + ++ G
Sbjct: 195 AQDDMLRVFAMMRRSGIG-LNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVF 253
Query: 317 LCACTSPLSLYQGMQIHSY-IIKKGFYSNVPVCNAIL----QHQAG-------ELFRLFS 364
L + + +G + + K NV V NA++ + +A E L+S
Sbjct: 254 LASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYS 313
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
+ + +P TF+ V+ AC +E G Q+H ++K D F+ + L+D+Y+ G
Sbjct: 314 EVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSG 373
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+ F + DVV+W+++I G Q E AL LF + +G++P+ T+ V+
Sbjct: 374 CMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMN 433
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
AC+ + + G Q+ + + G + + + AR+G VH A +M DI
Sbjct: 434 ACASLAVARTGEQI-QCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEME-SHDI 491
Query: 545 VVWKSLLASCKTHG 558
V W ++++S HG
Sbjct: 492 VSWSAVISSHAQHG 505
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 298/530 (56%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF + + N++ W M G + + +A++LYV M+ GL+P+ +TF ++++C+
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K L +LI+MY + R+ DA VF +D+ S+ ++I G
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ ++ A+ +F+E+ ++ SWN +I+G A N EA+ LF +M + PD T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL------------ 359
+++ AC S+ G Q+H +I GF SN+ + NA+ L + GEL
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 360 ----------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
LF ML S P+ +T ++ ACA + ++++G +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 398 HCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G+ + L+DMY KCG + +A ++FN + + SW+++I G+A G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+ + LF RMR G++P+ +T VG+L+ACSH G+++ G ++R M +Y + P E
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL +G EAE+ IN M + D V+W SLL +CK HGNV++G+ AEN++KI+P
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 569
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYAS+G+W EVA+ + ++G++KVPG S IEI + +H
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 174/362 (48%), Gaps = 51/362 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ ++ +C+ ++ + G+++H H+L C D +H +++MY + G LEDA VFD
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G ++ G A+EL+
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M+++ + PD+ T +++ AC+ + LGRQ+H + GS+L NALI +Y+K
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIA 283
+ A +F + KD+ SW ++I G++ ++ A +F EM E+PN + +I+
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY-------QGMQIHSYI 336
A + + + D+ L G+T S L TS + +Y Q+ + I
Sbjct: 376 ACAHLGAIDIGRWIHVYI-DKRL--KGVTNASSL--RTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 337 IKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+ K S N + + +A F LFS M +PD ITF ++ AC+ L++G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 396 QL 397
+
Sbjct: 491 HI 492
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 172/378 (45%), Gaps = 54/378 (14%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+++ + FD+I W+ + S + Y EAL F + TN R ST ++
Sbjct: 216 IENAQKLFDEIPVKDVVSWN-AMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVV 273
Query: 88 SACSSLRSLQLGRKVH----DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
SAC+ S++LGR+VH DH S + + N ++++Y KCG LE A +F+ +P
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLK----IVNALIDLYSKCGELETACGLFERLPY 329
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++V+SW +I G + A+ L+ +ML+SG P+ T SI+ AC+ L + +GR +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 204 HAHVIKSEHGSHLIS--QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
H ++ K G S + +LI MY K I A VF+SI K ++SW +MI GF
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF---- 445
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A A+ + LFS M + PD +T LL AC+
Sbjct: 446 ------------------------AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHI 376
L G I + + Y P C L +G ++ + +PD +
Sbjct: 482 HSGMLDLGRHIFRTMTQD--YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 377 TFNDVMGACAAMASLEMG 394
+ ++ AC ++E+G
Sbjct: 540 IWCSLLKACKMHGNVELG 557
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV---KCGSLGSARELFNFMEDPDV 441
C + SL + +H ++K GL + ++ L++ + L A +F +++P++
Sbjct: 43 CKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+ W+++ G+A ALKL+ M S G+ PN T VL +C+ +EG Q++
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ + G + ++ + + GR+ +A ++ + D+V + +L+ + G ++
Sbjct: 160 VL-KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK-SPHRDVVSYTALIKGYASRGYIE 217
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
++ + I D + A++ + YA +G ++E L M + VR P +S
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMI---SGYAETGNYKEALELFKDMMKTNVR--PDES 267
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 295/578 (51%), Gaps = 66/578 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ AC + QLG+++H +L D + N ++ MYG+C +E AR+VFD+M +R+
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VVSW+ MI S+N + + A+EL +M + P + S++ + + +G+ +HA
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 206 HVIKSEHGSHL--ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
+VI++ + H+ + AL+ MY K L A
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKC----------------------------GHLGLA 251
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
R +FN + + SW +IAG + E LF M + + P+ +T+ SL+ C
Sbjct: 252 RQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFT 311
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------------ 353
+L G Q+H+YI++ GF ++ + A++
Sbjct: 312 GALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAML 371
Query: 354 ---HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
QA + F LF M S +P +T ++ CA +L++G +H YI K +
Sbjct: 372 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 431
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+D + L+DMY KCG + +A LF D+ W+++I G+A G GEEAL +F M
Sbjct: 432 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 491
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
GV+PN +T +G+L ACSH GLV EG +L+ M + +G++P E C+VDLL RAG
Sbjct: 492 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 551
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ EA + I M + +VW +L+A+C+ H N +G+ AA +L+I+P N VL+ NI
Sbjct: 552 LDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNI 611
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
YA++ +W + A + +MK G++K PG S IE+ +H
Sbjct: 612 YAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVH 649
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 187/395 (47%), Gaps = 28/395 (7%)
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
F S+++AC + LG+++H V+K + NAL+ MY + + A VF
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 242 IARKDITSWGSMIDGFSK---LDFARTVFNEME----SPNLASWNTIIAGVASCSN---- 290
+ +D+ SW +MI S+ D A + EM P+ + +++ A +N
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 291 -ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVC 348
A A + + + +P + + C L Q+ + + +K S +
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCG---HLGLARQLFNGLTQKTVVSWTAMIA 271
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
I ++ E +LF M P+ IT ++ C +L++G QLH YI++ G ++
Sbjct: 272 GCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSV 331
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ + L+DMY KC + +AR LF+ ++ DV+ W++++ YAQ C ++A LF +MR
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV-----VDLLA 523
+SGVRP VT+V +L+ C+ G ++ G ++ + E R C+ VD+ A
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE------RVEVDCILNTALVDMYA 445
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G ++ A + A DI +W +++ HG
Sbjct: 446 KCGDINAAGRLFIE-AISRDICMWNAIITGFAMHG 479
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 165/380 (43%), Gaps = 37/380 (9%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C L A ++ + ++ W + + + N E F +Q F
Sbjct: 240 DMYAKCGHLGLARQLFNGLTQKTVVSWT-AMIAGCIRSNRLEEGTKLFIRMQEENIFP-N 297
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T LI C +LQLG+++H +IL + L +++MYGKC + +AR +FD
Sbjct: 298 EITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFD 357
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
R+V+ WTAM++ +Q + A L+ QM SG+ P + T S++ C+ + L
Sbjct: 358 STQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDL 417
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +H+++ K I AL+ MY K I A +F +DI W ++I GF+
Sbjct: 418 GKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAM 477
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ EA+ +F+EM + + P+ +T LL A
Sbjct: 478 HGYGE----------------------------EALDIFAEMERQGVKPNDITFIGLLHA 509
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPD 374
C+ + +G ++ ++ + VP C L +AG L ++ + KP+
Sbjct: 510 CSHAGLVTEGKKLFEKMVHT--FGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPN 567
Query: 375 HITFNDVMGACAAMASLEMG 394
I + ++ AC + ++G
Sbjct: 568 TIVWGALVAACRLHKNPQLG 587
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 301/534 (56%), Gaps = 45/534 (8%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD + + N++ W M G + + +A++LY+ M+ GL+PD +TF ++++C+
Sbjct: 45 VFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKI 104
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K + +LI+MY + R+ DA VF + +D+ S+ ++I G
Sbjct: 105 RKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAG 164
Query: 257 F---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLT 312
+ ++ A+ +F+E+ ++ SWN +I+G N EA+ LF EM + PD T
Sbjct: 165 YVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDEST 224
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR--- 361
+ +++ AC S+ G +HS+I GF SN+ + NA++ A ELF
Sbjct: 225 MVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLW 284
Query: 362 -------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
LF ML S P+ +T ++ ACA + ++++G
Sbjct: 285 NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 344
Query: 397 LHCYIMKT--GLALDVF-VMNGLMDMYVKCGSLGSARELFNF-MEDPDVVSWSSLIVGYA 452
+H YI K G+ +V + L+DMY KCG + +A+++F+ M + + +W+++I G+A
Sbjct: 345 IHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFA 404
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G A +F RMR +G+ P+ +T VG+L+ACSH G+++ G ++R M Y I P
Sbjct: 405 MHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKL 464
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E C++DLL +G EAE+ IN M + D V+W SLL +CK HGN+++G+ A+ ++K
Sbjct: 465 EHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK 524
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV-RKVPGQSWIEIQTKIH 625
I+P NS + VLL NIYA++G+W EVA++ + ++G+ +KVPG S IEI + +H
Sbjct: 525 IEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVH 578
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 187/441 (42%), Gaps = 102/441 (23%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ L+ +C+ + + G+++H H+L D +H +++MY + G LEDAR VFD
Sbjct: 91 TFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDIS 150
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G + G A+EL+
Sbjct: 151 SHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFK 210
Query: 171 Q-MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ M+ + + PD+ T +++ AC+ + LGR +H+ + S+L NALI +Y+KF
Sbjct: 211 EMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKF 270
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ A +F + KD+ SW ++I G++ ++ +
Sbjct: 271 GEVETACELFDGLWNKDVISWNTLIGGYTHMNLYK------------------------- 305
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK--KGFYSNVP- 346
EA+ LF EM P+ +T+ S+L AC ++ G IH YI K KG +NV
Sbjct: 306 ---EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS 362
Query: 347 -------------------------------------VCNAILQHQAGELFRLFSLMLAS 369
+ + +A F +FS M +
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMN 422
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG-LMDMYVKCGSLGS 428
+PD ITF ++ AC+ L++G + + + G ++D+ G
Sbjct: 423 GIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKE 482
Query: 429 ARELFNFME-DPDVVSWSSLI 448
A E+ N M +PD V W SL+
Sbjct: 483 AEEMINTMPMEPDGVIWCSLL 503
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 176/385 (45%), Gaps = 47/385 (12%)
Query: 35 VDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
++S + FD+I D + S + Y EAL F + TN R ST ++S
Sbjct: 171 IESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVS 230
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ S++LGR VH I + + N ++++Y K G +E A +FD + ++V+S
Sbjct: 231 ACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVIS 290
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +I G + A+ L+ +ML+SG P+ T SI+ AC+ L + +GR +H ++
Sbjct: 291 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIN 350
Query: 209 KSEHG--SHLIS-QNALIAMYTKFDRILDAWNVF-SSIARKDITSWGSMIDGFSKLDFAR 264
K G +++ S Q +LI MY K I A VF SS++ + +++W +MI GF
Sbjct: 351 KKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGF------- 403
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
A AN A +FS M + PD +T LL AC+
Sbjct: 404 ---------------------AMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSG 442
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQT-KPDHITF 378
L G I + + Y P C L +G LF+ M+ + +PD + +
Sbjct: 443 MLDLGRNIFRSMTRG--YEITPKLEHYGCMIDLLGHSG-LFKEAEEMINTMPMEPDGVIW 499
Query: 379 NDVMGACAAMASLEMGTQLHCYIMK 403
++ AC +LE+G ++K
Sbjct: 500 CSLLKACKIHGNLELGESFAKKLIK 524
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 41/307 (13%)
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
DGF +A +VF+ ++ PNL WNT+ G A S+ A+ L+ M L+PD T
Sbjct: 37 DGFP---YAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFP 93
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
LL +C +G QIH +++K GF ++ V +++ M A +
Sbjct: 94 FLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLIS------------MYAQNGR-- 139
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
LE + + DV L+ YV G + SA++LF+
Sbjct: 140 ----------------LEDARK----VFDISSHRDVVSYTALIAGYVSRGYIESAQKLFD 179
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ DVVSW+++I GY + G +EAL+LF+ M + VRP+ T+V V++AC+ +E
Sbjct: 180 EIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIE 239
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
G ++ + N++G + + ++DL ++ G V A + + + ++ D++ W +L+
Sbjct: 240 LGRHVHSWI-NDHGFASNLKIVNALIDLYSKFGEVETACELFDGL-WNKDVISWNTLIGG 297
Query: 554 CKTHGNV 560
TH N+
Sbjct: 298 Y-THMNL 303
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 16/192 (8%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFR 77
L L + GEV ++ FD +W+ D+ S NLY EAL+ F + +
Sbjct: 263 LIDLYSKFGEV-ETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-- 319
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHI---LSSKCQPDAVLHNHILNMYGKCGSLE 132
P+ T ++ AC+ L ++ +GR +H +I L + L +++MY KCG ++
Sbjct: 320 -TPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDID 378
Query: 133 DARMVFDE-MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
A+ VFD M R++ +W AMI+G + +G+ NAA +++ +M +G+ PD TF ++ AC
Sbjct: 379 AAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSAC 438
Query: 192 SGLCCVGLGRQL 203
S + LGR +
Sbjct: 439 SHSGMLDLGRNI 450
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/588 (32%), Positives = 305/588 (51%), Gaps = 58/588 (9%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK--CGSLEDARMVFDEMPQ 143
LI C S+ L +++H + + + ++ I+ K G +E ARMVFD MP
Sbjct: 25 LIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPG 81
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
N W MI G S+ G N+A+ +Y +ML+ G+MPD++T+ +++ + V GR+L
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---L 260
H H++K S++ QNALI +Y+ + A VF ++ D+ +W MI G+++
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201
Query: 261 DFARTVFNEME---------------------------------------SPNLASWNTI 281
D + +F+EME P N +
Sbjct: 202 DESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENAL 261
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK--- 338
I A+C + + A+ +F M R++I S T +L Q +Y K
Sbjct: 262 IDMYAACGDMDTALGIFDNMKSRDVI-------SWTAIVTGFTNLGQVGLARNYFDKMPE 314
Query: 339 KGFYSNVPVCNAILQ-HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+ F S + + LQ ++ E+ LF M A+ KPD T ++ ACA + +LE+G +
Sbjct: 315 RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWI 374
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
YI K + +D FV N L+DMY CG++ A +FN M D +SW+++I G A G G
Sbjct: 375 KAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYG 434
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
EEAL +F +M + + P+ VT +GVL AC+H G+V++G + + M ++GI P C
Sbjct: 435 EEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGC 494
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+VDLL RAG + EA + I M + +VW SLL +C+ H + ++ + AA+ IL+++P N
Sbjct: 495 MVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPEN 554
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A VLLCNIYA+ +WE++ + M +RG++K PG S IE+ +H
Sbjct: 555 GAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVH 602
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 309/572 (54%), Gaps = 67/572 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++S+C+ S+ +G ++H I+ + + + +++MYGKCG++ A+ +FDEMP RN
Sbjct: 85 MVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRN 144
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VV+W ++I+G G AIEL+++M++ G+ P F+ +++ C + LG Q+H
Sbjct: 145 VVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHG 204
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+K +++ LI +Y+K WN+ D +R
Sbjct: 205 LSMKCGFCYNIVVGTCLIDLYSK------GWNI----------------------DASRL 236
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+F+ M N+ +W +++AG A C AM L +M + + +T LL + +S
Sbjct: 237 MFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSND 296
Query: 326 LYQGMQIHSYIIKKGFYSNV----------------------PVCNAILQHQA------- 356
L Q+H II++G SN VC+ + +
Sbjct: 297 LDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVI 356
Query: 357 --------GEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
GE + FS M + D TF V+ A +++L+ G Q+H ++K G
Sbjct: 357 GGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYG 416
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
++ V NGL+ MY +CGS+ A+ +F+ M+ DV+SW+SL+ G A G G EA++LF +M
Sbjct: 417 SNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQM 476
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI-IPTRERRSCVVDLLARAG 526
R SGV+P++ T + VL+AC HVGL+++GL+ + +M+N+Y + PT E S +VDL +RAG
Sbjct: 477 RRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAG 536
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EAEDFIN M + V+K+LL++C+ HGNV++ R A+ +L++ P + VLL N
Sbjct: 537 YLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSN 596
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+ A+ G W+ VA + M +RGVRK PG SWI
Sbjct: 597 VQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 217/489 (44%), Gaps = 82/489 (16%)
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P + S + IA + Q + ++L Q+ Q G P ++ +C+ V +G
Sbjct: 40 PGNDFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGI 99
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH+ +IK S++ +AL+ MY K + A +F + +++ +W S+I G+ +
Sbjct: 100 QLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVG 159
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
P + A+ LF EM + P +V ++L C
Sbjct: 160 ----------CPEI------------------AIELFLEMVKVGIDPTPFSVSAVLVGCW 191
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-HQAG---ELFRL-FSLM---------- 366
G+Q+H +K GF N+ V ++ + G + RL F LM
Sbjct: 192 RMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTS 251
Query: 367 ----LASQTKP-----------------DHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
A +P +++T+N ++ + ++ L+ Q+HC I++ G
Sbjct: 252 MVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREG 311
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNF----MEDPDVVSWSSLIVGYAQFGCGEEAL 461
L + ++ L+ +Y +C S S+ E FN + D +SW+++I G + G GE AL
Sbjct: 312 LESNSYLEVTLVTVYSECSS--SSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAAL 369
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVD 520
K F +MR +G+ + T VL A + ++EG Q++ +++ YG ++ +V
Sbjct: 370 KCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYG--SNLNVQNGLVS 427
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK-----IDP 575
+ AR G +++A+ + M D++ W SLL+ C HG G+ A E + + P
Sbjct: 428 MYARCGSINDAKRVFSLMD-RHDVISWNSLLSGCAYHG---YGREAVELFEQMRRSGVKP 483
Query: 576 TNSAALVLL 584
N+ LV+L
Sbjct: 484 DNTTFLVVL 492
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 151/328 (46%), Gaps = 36/328 (10%)
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC--GSLED 133
R+ TY L+S+ SS L ++VH I+ + ++ L ++ +Y +C SLED
Sbjct: 277 IRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLED 336
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
V + + + +SW A+I G S G AA++ + +M Q+G+ D FTF S++RA
Sbjct: 337 FNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGM 396
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+ + G+Q+HA V+K+ +GS+L QN L++MY + I DA VFS + R D+ SW S+
Sbjct: 397 ISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSL 456
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ G + + R EA+ LF +M + PD T
Sbjct: 457 LSGCAYHGYGR----------------------------EAVELFEQMRRSGVKPDNTTF 488
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-----LQHQAGELFRLFSLMLA 368
+L AC L +G++ +++ + P L +AG L +
Sbjct: 489 LVVLSACRHVGLLDKGLEYFD-LMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINT 547
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQ 396
+P + ++ AC ++E+ +
Sbjct: 548 MPIEPGPSVYKALLSACQVHGNVEIAVR 575
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 323/602 (53%), Gaps = 61/602 (10%)
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP T+ ++ AC + S + G VH + +S + + + N +++MYG+CG+ E+AR
Sbjct: 142 RPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQ 201
Query: 137 VFDEMPQRNV---VSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACS 192
VFDEM +R V VSW +++A Q G A++++ +M + G+ PD + +++ AC+
Sbjct: 202 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACA 261
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ G+Q+H + ++S + NA++ MY K + +A VF + KD+ SW +
Sbjct: 262 SVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNA 321
Query: 253 MIDGFS---KLDFARTVFNEMESP----NLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
M+ G+S + D A +F ++ N+ +W+ +IAG A EA+ +F +M
Sbjct: 322 MVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCG 381
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK--KGFYSNVP-----VCNAIL------ 352
P+ +T+ SLL C S +L G + H + IK N P V NA++
Sbjct: 382 SEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKC 441
Query: 353 -------------------------------QH-QAGELFRLFSLMLASQ--TKPDHITF 378
QH +A E LFS ML P+ T
Sbjct: 442 KSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTI 501
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGL-ALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ + ACA + +L G Q+H Y+++ + +FV N L+DMY K G + +AR +F+ M
Sbjct: 502 SCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH 561
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ VSW+SL+ GY G GEEAL++F M+ + P+ VT V VL ACSH G+V++G+
Sbjct: 562 QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGIN 621
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ M ++G++P E +C+VDLL+RAGR+ EA + I M VW +LL++C+ +
Sbjct: 622 YFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVY 681
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
NV++G+ AA +L+++ N + LL NIYA++ W++VAR+ MK G++K PG SW
Sbjct: 682 ANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSW 741
Query: 618 IE 619
++
Sbjct: 742 VQ 743
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 151/621 (24%), Positives = 248/621 (39%), Gaps = 137/621 (22%)
Query: 73 NTNFRIRPSTYADLISA----CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC 128
T F S+ DL S C SL S +L H +L D HI++MY
Sbjct: 37 TTFFFSTASSTTDLTSTLFHQCKSLASAEL---THQQLLVQGLPHDP---THIISMYLTF 90
Query: 129 GSLEDARMVFDEM--PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
S A V + V W +I G ++LY +M + G PD +TF
Sbjct: 91 NSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPF 150
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+++AC + G +HA V S ++ N L++MY + AW
Sbjct: 151 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGR----CGAW---------- 196
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMES---PNLASWNTIIAGVASCSNANEAMSLFSEMG- 302
+ AR VF+EM +L SWN+I+A ++ AM +F M
Sbjct: 197 --------------ENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE 242
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL 362
D + PD +++ ++L AC S + +G Q+H Y ++ G + +V V NA++
Sbjct: 243 DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV---------- 292
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
D+ C M + + DV N ++ Y +
Sbjct: 293 -----------------DMYAKCGMMEEANK-------VFERMKVKDVVSWNAMVTGYSQ 328
Query: 423 CGSLGSARELFNFMEDP----DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
G A LF + + +VV+WS++I GYAQ G G EAL +FR+M G PN VT
Sbjct: 329 IGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVT 388
Query: 479 LVGVLTACSHVGLVEEGLQLY--------RIMQNEYG----------------------- 507
LV +L+ C+ G + G + + + +N+ G
Sbjct: 389 LVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAAR 448
Query: 508 ----IIPTRERRSCVVDLL----ARAGRVHEAEDFINQMAFDDDIVVWKSL-----LASC 554
+IP ++R +L A+ G +EA + +QM D+ V+ + L +C
Sbjct: 449 AMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMAC 508
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVL---LCNIYASSGKWEEVARLMGSMKERGVRK 611
G + G++ +L+ + SA L + L ++Y+ SG + + +M +R
Sbjct: 509 ARLGALRFGRQIHAYVLR-NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN--- 564
Query: 612 VPGQSWIEIQT--KIHASGND 630
G SW + T +H G +
Sbjct: 565 --GVSWTSLMTGYGMHGRGEE 583
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 196/490 (40%), Gaps = 122/490 (24%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
A+ F+ + + R + +++ AC+S+ + G++VH + L S D + N +
Sbjct: 232 RAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAV 291
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN------------------ 163
++MY KCG +E+A VF+ M ++VVSW AM+ G SQ G+ +
Sbjct: 292 VDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNV 351
Query: 164 -----------------AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
A++++ QML G P+ T S++ C+ + G++ H H
Sbjct: 352 VTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCH 411
Query: 207 VIK-------SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
IK ++ G L+ NALI MY+K A +F I KD
Sbjct: 412 AIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKD------------- 458
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLL 317
R+V +W +I G A ANEA+ LFS+M D ++P+ T+ L
Sbjct: 459 ----RSV---------VTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCAL 505
Query: 318 CACTSPLSLYQGMQIHSYIIKKGF---------------------------YSNVPVCNA 350
AC +L G QIH+Y+++ F + N+ N
Sbjct: 506 MACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNG 565
Query: 351 I----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ + + E ++F M PD +TF V+ AC+ ++ G
Sbjct: 566 VSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYF-- 623
Query: 401 IMKTGLALDVFVMNG------LMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG--- 450
G+ D V+ G ++D+ + G L A EL M P W +L+
Sbjct: 624 ---NGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV 680
Query: 451 YAQFGCGEEA 460
YA GE A
Sbjct: 681 YANVELGEYA 690
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Query: 61 NEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV-L 117
NEAL F + NF + P+ T + + AC+ L +L+ GR++H ++L ++ + + +
Sbjct: 478 NEALELFSQMLQPDNF-VMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFV 536
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
N +++MY K G ++ AR+VFD M QRN VSWT+++ G +G+ A++++ +M + L
Sbjct: 537 ANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXL 596
Query: 178 MPDQFTFGSIIRACS 192
+PD TF ++ ACS
Sbjct: 597 VPDGVTFVVVLYACS 611
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/642 (30%), Positives = 323/642 (50%), Gaps = 67/642 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+A+ C LD A V+ R D W+ L + + Y ++ + L + + I
Sbjct: 194 EAYTSCGELDAAETVLLGLPERSDVSWN-ALLNGYARHGDYRRVMIIIEKLVASGD-EIS 251
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T ++ C L + G+ VH ++ + D VL++ ++ MY +C S E+A VF
Sbjct: 252 KYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFI 311
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ + +VV +AMI+ ++ A++L+V+M G+ P+ + F I S L
Sbjct: 312 RIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANL 371
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
R +HA+++KS +A++ MY K + DA
Sbjct: 372 CRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDA------------------------ 407
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
F+ + P+ SWNTI++ S SN + + +F +M + T S+L
Sbjct: 408 ----TVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRC 463
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------------- 353
CTS ++L G Q+H+ I+K G ++ V ++
Sbjct: 464 CTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSW 523
Query: 354 ----------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+A ++ F ML +P T + C+ MASL G QLH + +K
Sbjct: 524 TVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIK 583
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G V V L+DMYVKCG++ A LF+ E D V+W+++I GY+Q G G +AL
Sbjct: 584 SGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDA 642
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F++M G RP+ +T VGVL+ACSH GL+ EG + ++ + + YGI PT E +C+VD+L+
Sbjct: 643 FKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILS 702
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
+AGR+ EAE INQM D +W+++L +C+ H N+++ +RAAE + +++P ++++ +L
Sbjct: 703 KAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSIL 762
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L NIYA G+W +V R+ + + GV+K PG SWIEI +IH
Sbjct: 763 LSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIH 804
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 225/458 (49%), Gaps = 21/458 (4%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+A + C+ R+L+ G+++H +L S PD L + +LNMY KCG L DAR VFD MP
Sbjct: 53 HAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMP 112
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R++V+WTAMI+ + G + A++++ +M Q G+ P+ FT S+++ACSG Q
Sbjct: 113 HRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQ 172
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H V+K ++L+ YT + A V + + SW ++++G+++
Sbjct: 173 VHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGD 232
Query: 263 ARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
R V +E S + S T+ + C ++ + + +I GL ++L
Sbjct: 233 YRRVMIIIEKLVASGDEISKYTLPTVLKCCMEL--GLAKYGQSVHASVIKRGLETDNVLN 290
Query: 319 AC-----TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLMLA 368
+C + LS + ++ I + +V C+A++ A E LF M
Sbjct: 291 SCLVEMYSRCLSAEEAYEVFIRIDEP----DVVHCSAMISCFDRHDMAWEALDLFVKMSG 346
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
KP+H F + G + + +H YI+K+G A+ V + +++MYVK G++
Sbjct: 347 MGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQD 406
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A F+ + +PD SW++++ + E+ L++F++M G N T V VL C+
Sbjct: 407 ATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTS 466
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
+ + G Q++ + G+ + +VD+ A++G
Sbjct: 467 LMNLRFGTQVHACILKS-GLQNDTDVSRMLVDMYAQSG 503
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 255/605 (42%), Gaps = 95/605 (15%)
Query: 20 DAFELCMLLD---QAGEVVDSFLRRFDDIWDFDLFS---SLCKQNLYNEALVAFDFLQNN 73
D F L LL+ + G +VD+ R FD + D+ + + ++ A D
Sbjct: 84 DTFLLDSLLNMYCKCGRLVDA-RRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARM 142
Query: 74 TNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
I P+ T A ++ ACS + +VH ++ D + + ++ Y CG L
Sbjct: 143 NQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGEL 202
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ A V +P+R+ VSW A++ G +++G + + +++ SG ++T ++++ C
Sbjct: 203 DAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCC 262
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
L G+ +HA VIK + + + L+ MY++ +A+ VF I D+
Sbjct: 263 MELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCS 322
Query: 252 SMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+MI F + D A +F +M + + I G+A + S GD L
Sbjct: 323 AMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVA---------SRTGDANL-- 371
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------- 353
C S +H+YI+K GF V +AIL
Sbjct: 372 -----------CRS---------VHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTF 411
Query: 354 ---HQAGEL------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
H+ R+F M + T+ V+ C ++ +L
Sbjct: 412 DLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLR 471
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
GTQ+H I+K+GL D V L+DMY + G SA +F +++ D SW+ ++ GYA
Sbjct: 472 FGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYA 531
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPT 511
+ E+ ++ FR M +RP+ TL L+ CS + + GLQL+ +++ + +
Sbjct: 532 KTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWN---S 588
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN-----------V 560
+VD+ + G + +AE ++ D V W +++ HG+ V
Sbjct: 589 SVVSGALVDMYVKCGNIADAEMLFHESETRDQ-VAWNTIICGYSQHGHGYKALDAFKQMV 647
Query: 561 DVGKR 565
D GKR
Sbjct: 648 DEGKR 652
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 297/582 (51%), Gaps = 66/582 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +I AC L S+ LGR VHD I + D + + ++ Y + G + DAR +FD M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P ++ V W M+ G +NG + A ++++M ++ P+ TF ++ C+ + G
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268
Query: 202 QLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
QLH V+ S E S + + ALI +Y K + A +F DI +MI G+
Sbjct: 269 QLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGY-- 326
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
V N M N A+ +F + + + +T+ S+L A
Sbjct: 327 ------VLNGMN--------------------NNALEIFRWLLQERMRANSVTLASVLPA 360
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-----------LQHQA------------ 356
C +L G ++H +I+K G + V +AI L HQ
Sbjct: 361 CAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCW 420
Query: 357 -------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E LF M + TK D ++ + + ACA + +L G ++H ++M+
Sbjct: 421 NSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR 480
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
D+F + L+DMY KCG+L A +F+ ME+ + VSW+S+I Y G +++L L
Sbjct: 481 GAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNL 540
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M G++P+HVT + +++AC H G V+EG+ +R M E GI+ E +C+VDL
Sbjct: 541 FHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFG 600
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAGR++EA IN M F D VW +LL +C+ HGNV++ + A+ N+ +DP NS VL
Sbjct: 601 RAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVL 660
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N++A++G+WE V ++ MKERGV+KVPG SWI++ H
Sbjct: 661 LSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTH 702
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 239/490 (48%), Gaps = 22/490 (4%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ C+ L GR+ H +L + + +L +L MY CG+ DA+ +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
W MI G + GQ + A+ Y +ML G +PD++TF +I+AC GL V LGR +H
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDF 262
+ + ++LI Y++ I DA +F + KD W M++G+ K D
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 263 ARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
A VF EM +PN ++ +++ AS E M F ++ GL + S +
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCAS-----EIMINFGSQLHGLVVSSGLEMDSPVA 286
Query: 319 ACTSPLSLY---QGMQIHSYIIKKGFYSNVPVCNA-----ILQHQAGELFRLFSLMLASQ 370
+ + +Y + +++ I + ++ VC A +L +F +L +
Sbjct: 287 NTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 346
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+ + +T V+ ACA +A+L +G +LH +I+K G +V + +MDMY KCG L A
Sbjct: 347 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAH 406
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
+ F + D D V W+S+I +Q G EEA+ LFR+M +G + + V++ L+AC+++
Sbjct: 407 QTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLP 466
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
+ G +++ M S ++D+ ++ G + A + M + + V W S+
Sbjct: 467 ALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSI 524
Query: 551 LASCKTHGNV 560
+A+ HG +
Sbjct: 525 IAAYGNHGRL 534
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 162/347 (46%), Gaps = 32/347 (9%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + N AL F +L R T A ++ AC+ L +L LG+++H HIL +
Sbjct: 322 MISGYVLNGMNNNALEIFRWLLQE-RMRANSVTLASVLPACAGLAALTLGKELHGHILKN 380
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + I++MY KCG L+ A F + ++ V W +MI CSQNG+ AI+L+
Sbjct: 381 GHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLF 440
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
QM +G D + + + AC+ L + G+++HA +++ S L +++ALI MY+K
Sbjct: 441 RQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKC 500
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ A VF ++ K N SWN+IIA +
Sbjct: 501 GNLDLACRVFDTMEEK----------------------------NEVSWNSIIAAYGNHG 532
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVP-- 346
++++LF M + PD +T +++ AC + +G+ + ++ G + +
Sbjct: 533 RLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHY 592
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
C L +AG L F ++ + PD + ++GAC ++E+
Sbjct: 593 ACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVEL 639
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 196/451 (43%), Gaps = 81/451 (17%)
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
SI++ C+ + GRQ HA ++ + G + I L+ MY LDA N+F +
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 246 DITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
W MI GF+ + DFA + +M C
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKM---------------LGCGT------------ 143
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------H 354
+PD T ++ AC S+ G +H I GF +V V +++++ H
Sbjct: 144 ----LPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIH 199
Query: 355 QAGELFR----------------------------LFSLMLASQTKPDHITFNDVMGACA 386
A LF +F M ++T P+ +TF V+ CA
Sbjct: 200 DARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMN--GLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
+ + G+QLH ++ +GL +D V N L+D+Y KC + AR++F+ D+V
Sbjct: 260 SEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVC 319
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQ 503
+++I GY G AL++FR + +R N VTL VL AC+ + + G +L+ I++
Sbjct: 320 TAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILK 379
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN---- 559
N +G + S ++D+ A+ GR+ A ++ D D V W S++ SC +G
Sbjct: 380 NGHG--GSCYVGSAIMDMYAKCGRLDLAHQTFIGIS-DKDAVCWNSMITSCSQNGKPEEA 436
Query: 560 VDVGKRAAENILKIDPTN-SAALVLLCNIYA 589
+D+ ++ K D + SAAL N+ A
Sbjct: 437 IDLFRQMGMAGTKYDCVSISAALSACANLPA 467
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/632 (31%), Positives = 320/632 (50%), Gaps = 76/632 (12%)
Query: 42 FDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFR--------IRPS--TYADLISACS 91
FD I + D+ S C N +++ L FR I P+ T + +A S
Sbjct: 68 FDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAAS 127
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
+L + GR+ H + + C D + +LNMY K G + +AR +FDEMP+RN VSW
Sbjct: 128 TLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWAT 187
Query: 152 MIAGCSQNGQENAAIELYVQML--QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
MI+G + + A EL+ M + G ++F F S++ A + V GRQ+H+ +K
Sbjct: 188 MISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMK 247
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
+ + NAL+ MY K + DA F K+ +W +M+
Sbjct: 248 NGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMV--------------- 292
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
G A ++++A+ LF +M +P T+ ++ AC+ ++ +G
Sbjct: 293 -------------TGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEG 339
Query: 330 MQIHSYIIKKGFYSNVPV----------CNAILQHQAG---------------------- 357
Q+H Y +K G+ + V C +I+ + G
Sbjct: 340 RQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQN 399
Query: 358 ----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
L+ M P+ +T V+ AC+ +A+L+ G Q+H I+K +L++ +
Sbjct: 400 GDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIG 459
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ L MY KCGSL +F M DV+SW+++I G +Q G G E L+LF +M G +
Sbjct: 460 SALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTK 519
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
P++VT V +L+ACSH+GLV+ G +++M +E+ I PT E +C+VD+L+RAG++HEA++
Sbjct: 520 PDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKE 579
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
FI D + +W+ LLA+ K H + D+G A E ++++ S+A VLL +IY + GK
Sbjct: 580 FIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGK 639
Query: 594 WEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
WE+V R+ G MK RGV K PG SWIE+++ H
Sbjct: 640 WEDVERVRGMMKARGVTKEPGCSWIELKSLTH 671
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 243/552 (44%), Gaps = 108/552 (19%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
C+ + L+ GR +H IL + + N ++N+Y KC A +VFD + ++VVSW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 150 TAMIAGCSQNGQENAAIELYVQ-------MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+I SQ Q+ A L+V M ++P+ T + A S L GRQ
Sbjct: 80 NCLINAFSQ--QQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQ 137
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
HA +K+ + + ++L+ MY K + +A ++F + ++ SW +MI G+
Sbjct: 138 AHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGY----- 192
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE--LIPDGLTVRSLLCAC 320
AS A+EA LF M E + S+L A
Sbjct: 193 -----------------------ASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSAL 229
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAGEL------------------- 359
T + + G Q+HS +K G V V NA++ + G L
Sbjct: 230 TCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWS 289
Query: 360 ---------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+LF M S P T V+ AC+ ++ G Q+H Y +K
Sbjct: 290 AMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKL 349
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G L ++V++ L+DMY KCGS+ AR+ F ++ PDVV W+S+I GY Q G E AL L+
Sbjct: 350 GYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLY 409
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGI--------------- 508
+M+ GV PN +T+ VL ACS++ +++G Q++ I++ + +
Sbjct: 410 GKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKC 469
Query: 509 ------------IPTRERRS--CVVDLLARAGRVHEAEDFINQMAFD---DDIVVWKSLL 551
+P R+ S ++ L++ GR +E + +M + D V + +LL
Sbjct: 470 GSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLL 529
Query: 552 ASCKTHGNVDVG 563
++C G VD G
Sbjct: 530 SACSHMGLVDRG 541
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 211/636 (33%), Positives = 325/636 (51%), Gaps = 68/636 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C + A ++ D +R +++F + + K + Y EA+ F + + + TY
Sbjct: 68 CGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGD-YFEAMKVFLEMLGSKDCCPDNYTYP 126
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+I ACS L ++ GR +H L SK + N +L MY CG +E+AR VFD M ++
Sbjct: 127 FVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEK 186
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+VVSW MI G +NG N A+ ++ QM+ SG+ D + S++ AC L + +GR++H
Sbjct: 187 SVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVH 246
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
V + G ++S NAL+ MY K GSM D AR
Sbjct: 247 GLVEEKVLGKKIVS-NALVDMYAK---------------------CGSM-------DEAR 277
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF+ M ++ SW ++I G +A A+SLF M L P+ +T+ +L AC S
Sbjct: 278 LVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLN 337
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV------------C-------------------NAIL- 352
+L G +H +++K+ YS V V C NA+L
Sbjct: 338 NLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLS 397
Query: 353 ----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
A E LF ML + + T N ++ A +A L+ ++ Y+M++G
Sbjct: 398 GCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVS 457
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFM--EDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
++ V L+D+Y KCGSL SA ++FN + + D+ WS +I GY G GE A+ LF++
Sbjct: 458 NIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQ 517
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M SGV+PN VT VL +CSH G+V++GL L++ M ++ IP + +C+VDLL RAG
Sbjct: 518 MVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAG 577
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EA D I M F VW +LL +C H NV++G+ AA + +++P N+ VLL
Sbjct: 578 RMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAK 637
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
+YA+ G+WE+ + M + G+RK P S IE T
Sbjct: 638 LYAALGRWEDAENVRQRMDDIGLRKAPAHSLIEAGT 673
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/671 (31%), Positives = 321/671 (47%), Gaps = 122/671 (18%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S C++ ++ + LV +T A L+ AC L L LG ++H + +
Sbjct: 134 LLSGYCQRGMFRD-LVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKT 192
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + +++MYGKC SLEDA F M +RN VSW A+IAGC QN Q +EL
Sbjct: 193 GLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELL 252
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ C + C+ RQLHAH IK++ S + A++ +Y K
Sbjct: 253 CR-------------------CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKA 293
Query: 230 DRILDAW--------------------------------------------------NVF 239
D ++DA VF
Sbjct: 294 DSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVF 353
Query: 240 SSIARK-----DITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
S+ A D+ +++D + K L A VF EME + SWNTIIA +
Sbjct: 354 SACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECY 413
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-----FYSNVP 346
+ + +EM + D T S+L AC SL G+ +H IK G F S+
Sbjct: 414 EDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 473
Query: 347 V-----CNAI--------------------------LQHQAGELFRLFSLMLASQTKPDH 375
V C I L Q+ E + FS ML KPDH
Sbjct: 474 VDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDH 533
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
T+ V+ +CA +A++E+G Q+H I+K + D F+ + L+DMY KCG++ ++ +F
Sbjct: 534 FTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEK 593
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
++ D VSW+++I GYA G G EAL++F R + + V PNH T V VL ACSHVGL+++G
Sbjct: 594 VQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDG 653
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ + +M + Y + P E +C+ EA FI M + D V+WK+LL+ CK
Sbjct: 654 CRYFHLMTSRYKLEPQLEHFACM--------GPQEALKFIRSMPLEADAVIWKTLLSICK 705
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
+V+V + AA N+L++DP +S+ +LL N+YA SGKW +V+R M++ ++K PG
Sbjct: 706 IRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGC 765
Query: 616 SWIEIQTKIHA 626
SWIE+Q+++H
Sbjct: 766 SWIEVQSEMHG 776
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 151/608 (24%), Positives = 264/608 (43%), Gaps = 115/608 (18%)
Query: 81 STYADLISACSSL--RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+T++ + C+S +L G+ H +L S P + N +L MY +CG A VF
Sbjct: 30 ATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVF 89
Query: 139 DEMPQRN-------------------------------VVSWTAMIAGCSQNGQENAAIE 167
D MP R+ VVSW A+++G Q G +
Sbjct: 90 DTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVG 149
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L ++M + G+ PD+ T +++AC GL + LG Q+HA +K+ + + +AL+ MY
Sbjct: 150 LSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYG 209
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDG------------------------------- 256
K + DA + F + ++ SWG++I G
Sbjct: 210 KCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHA 269
Query: 257 --------------------FSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANE 293
++K D AR F + + + + N ++ G+ E
Sbjct: 270 HAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAE 329
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACT-------------SPLSLYQGMQ--IHSYII- 337
AM LF M + +++ + AC + L LY + + +Y++
Sbjct: 330 AMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVF 389
Query: 338 ----KKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
++ S + A+ Q++ E + ML S + D T+ V+ ACA + SLE
Sbjct: 390 QEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLE 449
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G +H +K+GL LD FV + ++DMY KCG + A +L + + ++VSW+S+I G++
Sbjct: 450 YGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFS 509
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPT 511
EEA K F M GV+P+H T VL +C+++ +E G Q++ +I++ E ++
Sbjct: 510 LNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQE--MLGD 567
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
S +VD+ A+ G + +++ ++ D V W +++ HG G A E
Sbjct: 568 EFISSTLVDMYAKCGNMPDSQLMFEKVQ-KLDFVSWNAMICGYALHGQ---GFEALEMFE 623
Query: 572 KIDPTNSA 579
+ N A
Sbjct: 624 RTQKANVA 631
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 14/279 (5%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C L +A V +R W+ + ++L + Y + +V + + +
Sbjct: 374 DLYGKCKALVEAYLVFQEMEQRDSVSWN-TIIAALEQNECYEDTIVHLNEMLR-SGMEAD 431
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
TY ++ AC+ L+SL+ G VH + S DA + + +++MY KCG + +A + D
Sbjct: 432 DFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHD 491
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ + +VSW ++IAG S N Q A + + +ML G+ PD FT+ +++ +C+ L + L
Sbjct: 492 RIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIEL 551
Query: 200 GRQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI---- 254
G+Q+H +IK E G IS + L+ MY K + D+ +F + + D SW +MI
Sbjct: 552 GKQIHGQIIKQEMLGDEFIS-STLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYA 610
Query: 255 ---DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
GF L+ +PN A T +A + +CS+
Sbjct: 611 LHGQGFEALEMFERTQKANVAPNHA---TFVAVLRACSH 646
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 200/469 (42%), Gaps = 61/469 (13%)
Query: 183 TFGSIIRACS--GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
TF + + C+ G + G+ HA ++ S + N L+ MY + A VF
Sbjct: 31 TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90
Query: 241 SIARKDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
++ +D SW +M+ ++ + A ++ M P++ SWN +++G + + L
Sbjct: 91 TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---- 353
EM + PD T+ LL AC L G+QIH+ +K G +V +A++
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGK 210
Query: 354 -----------HQAGELFRLF--SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
H GE + +++ ++ +++ C A+ L QLH +
Sbjct: 211 CRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHAH 270
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K + D V ++D+Y K SL AR F + + V + ++++VG + G G EA
Sbjct: 271 AIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEA 330
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHV---------------------GLVEEGLQLY 499
++LF+ M SG+ V+L GV +AC+ V LVE L
Sbjct: 331 MQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQ 390
Query: 500 RIMQNEY----GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ Q + II E+ C D + VH E + M DD + S+L +C
Sbjct: 391 EMEQRDSVSWNTIIAALEQNECYEDTI-----VHLNEMLRSGMEADD--FTYGSVLKACA 443
Query: 556 THGNVDVG----KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARL 600
+++ G +A ++ L +D S+ +V ++Y G E +L
Sbjct: 444 GLQSLEYGLVVHGKAIKSGLGLDAFVSSTVV---DMYCKCGMITEALKL 489
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 307/583 (52%), Gaps = 60/583 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+YA ++ACS L+ GR VH + + N +++MY KCG + +AR VFD
Sbjct: 111 SYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVA 170
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC--CVGL 199
+R+ VSW ++++G + G + ++ M + G+ + F GS+I+ CSG + +
Sbjct: 171 EERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDI 230
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
+H VIK+ S + +A+I MY K +++A +F S+ ++ + +MI G
Sbjct: 231 AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAG--- 287
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
F RT T+I A+EA++L+SE+ R + P T S+L A
Sbjct: 288 --FCRT-------------ETVIGKEV----ASEALTLYSEVQSRGMQPTEFTFSSVLRA 328
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
C L G QIH +IK F + + +A++
Sbjct: 329 CNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTW 388
Query: 353 --------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q++ E LF L + KPD T + VM ACA++A G Q+ C+ K
Sbjct: 389 TAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATK 448
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + N + MY + G + +A F ME DVVSWS++I +AQ GC +AL
Sbjct: 449 SGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHF 508
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M + V PN +T +GVLTACSH GLV+EGL+ Y M +YG+ PT + +CVVDLL
Sbjct: 509 FDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLG 568
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAGR+ +AE FI+ F D V+W+SLLASC+ H +++ G+ A I++++PT+SA+ V+
Sbjct: 569 RAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVI 628
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L N+Y +G+ ++ MK+RGV+K PG SWIE++ +H+
Sbjct: 629 LYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHS 671
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 218/494 (44%), Gaps = 25/494 (5%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L+ AC+SLR + L N +L Y + G AR + DEMP
Sbjct: 14 YLHLLRACTSLRHAAAVHAHIARAHPA---ASLFLRNTLLAAYCRLGGPLPARRLLDEMP 70
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RN VS+ +I S+ G ++E + ++G+ D+F++ + + ACS + GR
Sbjct: 71 RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF----S 258
+HA I S + N+L++MY+K + +A VF +D SW S++ G+ +
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190
Query: 259 KLDFARTVFNEMESPNLASWNTIIAG--VASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+ + R VF M + N+ G + CS + +E +I GL
Sbjct: 191 REEMVR-VFAMMRRGGMG-LNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVF 248
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAIL-----------QHQAGELFRLFS 364
L + + +G + + + + NV + N ++ + A E L+S
Sbjct: 249 LVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYS 308
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
+ + +P TF+ V+ AC LE G Q+H ++K D F+ + L+D+Y G
Sbjct: 309 EVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSG 368
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+ F D+V+W++++ G Q E+AL LF +G++P+ T+ V+
Sbjct: 369 CMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMN 428
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
AC+ + + G Q+ + + G + V + AR+G V A +M D+
Sbjct: 429 ACASLAVARAGEQI-QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME-SHDV 486
Query: 545 VVWKSLLASCKTHG 558
V W ++++ HG
Sbjct: 487 VSWSAVISCHAQHG 500
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 187/417 (44%), Gaps = 48/417 (11%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
+ + +EAL + +Q+ ++P+ T++ ++ AC+ L+ G+++H ++ Q D
Sbjct: 297 KEVASEALTLYSEVQSRG---MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQED 353
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ + ++++Y G +ED F P+ ++V+WTAM++GC QN A+ L+ + L
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
+GL PD FT S++ AC+ L G Q+ KS + N+ + MY + +
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDA 473
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
A F + D+ SW ++I ++ AR +A
Sbjct: 474 ATRRFQEMESHDVVSWSAVISCHAQHGCAR----------------------------DA 505
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI-- 351
+ F EM D +++P+ +T +L AC+ + +G++ + + K G + C +
Sbjct: 506 LHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVD 565
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK---TGLAL 408
L +AG L + + S D + + ++ +C LE G + IM+ T A
Sbjct: 566 LLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSAS 625
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV-----VSWSSLIVGYAQFGCGEEA 460
V + N MY+ G L A + + M+ V +SW L G F G+++
Sbjct: 626 YVILYN----MYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKS 678
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D ++ + AC+ L G +H + GL+ VFV N L+ MY KCG +G AR +F
Sbjct: 108 DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF 167
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ E+ D VSW+SL+ GY + G EE +++F MR G+ N L V+ CS G +
Sbjct: 168 DVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG--D 225
Query: 494 EGLQLYRIMQN---EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
+ + + + G+ S ++D+ A+ G + EA + + ++V++ ++
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNTM 284
Query: 551 LAS-CKTHGNVDVGKRAAENILKI 573
+A C+T +GK A L +
Sbjct: 285 IAGFCRT--ETVIGKEVASEALTL 306
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 307/583 (52%), Gaps = 60/583 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+YA ++ACS L+ GR VH + + N +++MY KCG + +AR VFD
Sbjct: 111 SYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVA 170
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC--CVGL 199
+R+ VSW ++++G + G + ++ M + G+ + F GS+I+ CSG + +
Sbjct: 171 EERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDI 230
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
+H VIK+ S + +A+I MY K +++A +F S+ ++ + +MI G
Sbjct: 231 AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAG--- 287
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
F RT T+I A+EA++L+SE+ R + P T S+L A
Sbjct: 288 --FCRT-------------ETVIGKEV----ASEALTLYSEVQSRGMQPTEFTFSSVLRA 328
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
C L G QIH +IK F + + +A++
Sbjct: 329 CNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTW 388
Query: 353 --------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q++ E LF L + KPD T + VM ACA++A G Q+ C+ K
Sbjct: 389 TAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATK 448
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + N + MY + G + +A F ME DVVSWS++I +AQ GC +AL
Sbjct: 449 SGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHF 508
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M + V PN +T +GVLTACSH GLV+EGL+ Y M +YG+ PT + +CVVDLL
Sbjct: 509 FDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLG 568
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAGR+ +AE FI+ F D V+W+SLLASC+ H +++ G+ A I++++PT+SA+ V+
Sbjct: 569 RAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVI 628
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L N+Y +G+ ++ MK+RGV+K PG SWIE++ +H+
Sbjct: 629 LYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHS 671
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 218/494 (44%), Gaps = 25/494 (5%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L+ AC+SLR + L N +L Y + G AR + DEMP
Sbjct: 14 YLHLLRACTSLRHAAAVHAHIARAHPA---ASLFLRNTLLAAYCRLGGPLPARRLLDEMP 70
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RN VS+ +I S+ G ++E + ++G+ D+F++ + + ACS + GR
Sbjct: 71 RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF----S 258
+HA I S + N+L++MY+K + +A VF +D SW S++ G+ +
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190
Query: 259 KLDFARTVFNEMESPNLASWNTIIAG--VASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+ + R VF M + N+ G + CS + +E +I GL
Sbjct: 191 REEMVR-VFAMMRRGGMG-LNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVF 248
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAIL-----------QHQAGELFRLFS 364
L + + +G + + + + NV + N ++ + A E L+S
Sbjct: 249 LVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYS 308
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
+ + +P TF+ V+ AC LE G Q+H ++K D F+ + L+D+Y G
Sbjct: 309 EVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSG 368
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+ F D+V+W++++ G Q E+AL LF +G++P+ T+ V+
Sbjct: 369 CMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMN 428
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
AC+ + + G Q+ + + G + V + AR+G V A +M D+
Sbjct: 429 ACASLAVARAGEQI-QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME-SHDV 486
Query: 545 VVWKSLLASCKTHG 558
V W ++++ HG
Sbjct: 487 VSWSAVISCHAQHG 500
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 186/417 (44%), Gaps = 48/417 (11%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
+ + +EAL + +Q+ ++P+ T++ ++ AC+ L+ G+++H ++ Q D
Sbjct: 297 KEVASEALTLYSEVQSRG---MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQED 353
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ + ++++Y G +ED F P+ ++V+WTAM++GC QN A+ L+ + L
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
+GL PD FT S++ AC+ L G Q+ KS + N+ + MY + +
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDA 473
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
A F + D+ SW ++I ++ AR +A
Sbjct: 474 ATRRFQEMESHDVVSWSAVISCHAQHGCAR----------------------------DA 505
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI-- 351
+ F EM D +++P+ +T +L AC+ + +G++ + + K G + C +
Sbjct: 506 LHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVD 565
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK---TGLAL 408
L +AG L + + D + + ++ +C LE G + IM+ T A
Sbjct: 566 LLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSAS 625
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV-----VSWSSLIVGYAQFGCGEEA 460
V + N MY+ G L A + + M+ V +SW L G F G+++
Sbjct: 626 YVILYN----MYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKS 678
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D ++ + AC+ L G +H + GL+ VFV N L+ MY KCG +G AR +F
Sbjct: 108 DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF 167
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ E+ D VSW+SL+ GY + G EE +++F MR G+ N L V+ CS G +
Sbjct: 168 DVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG--D 225
Query: 494 EGLQLYRIMQN---EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
+ + + + G+ S ++D+ A+ G + EA + + ++V++ ++
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNTM 284
Query: 551 LAS-CKTHGNVDVGKRAAENILKI 573
+A C+T +GK A L +
Sbjct: 285 IAGFCRT--ETVIGKEVASEALTL 306
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 202/636 (31%), Positives = 330/636 (51%), Gaps = 44/636 (6%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A ++ D +R W+ + SS K ++EAL + + ++ ++ ST++ ++
Sbjct: 88 LDVARQLFDQMPQRTVVSWN-TMISSYSKHGRFSEALFLV-YSMHRSHMKLSESTFSSVL 145
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-------- 139
S C+ LR L+ G+ +H +L S + ++ + +L Y C + +AR VFD
Sbjct: 146 SVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEV 205
Query: 140 -----------------------EMPQRNVVSWTAMIAGCSQNGQE-NAAIELYVQMLQS 175
+MP+R+VV+WT +I+G S+NG A+E++ M++S
Sbjct: 206 LWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRS 265
Query: 176 G-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
G P++FTF ++RAC L + +GR +H ++K AL+ Y + + I D
Sbjct: 266 GETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDD 325
Query: 235 AWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
A V + + + S+I+G +++ A VFN M N S+N +I G A
Sbjct: 326 ALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQM 385
Query: 292 NEAMSLFSEMGDRELIPDG--LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+++ LF +M R + ++V S L L++ + K N +
Sbjct: 386 DDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNE----KDPVTWNSMISG 441
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
I Q E +L+ M + TF+ + AC+ + SL+ G LH +++KT +
Sbjct: 442 YIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESN 501
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V+V L+DMY KCGS+ A+ F + P+V +W++LI G+A G G EA+ LF M
Sbjct: 502 VYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIE 561
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
G+ PN T VGVL+ACS GLV EG++++ M+ Y + PT E +CVVDLL R+G +
Sbjct: 562 QGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIR 621
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
EAE+FI +M + D VVW +LL++C +++VG+R AE + DP ++ V+L NIYA
Sbjct: 622 EAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYA 681
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
G+W E + ++ V+K PG SWIE+ KIH
Sbjct: 682 GLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIH 717
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 218/481 (45%), Gaps = 50/481 (10%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N ++ Y K L+ AR +FD+MPQR VVSW MI+ S++G+ + A+ L M +S +
Sbjct: 76 NIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMK 135
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
+ TF S++ C+ L C+ G+ +H V+KS S + +AL+ Y I +A V
Sbjct: 136 LSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRV 195
Query: 239 FSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVAS----CSNA 291
F + R++ W M+ G+ + +D A +VF +M ++ +W T+I+G + C A
Sbjct: 196 FDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKA 255
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG----------- 340
E L G E P+ T ++ AC L G +H ++K G
Sbjct: 256 LEMFRLMMRSG--ETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGAL 313
Query: 341 --FYSN-------VPVCNAILQHQAGELFRLF------------SLMLASQTKPDHITFN 379
FY + VC ++ L L L+ T+ + +++N
Sbjct: 314 VEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYN 373
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-D 438
++ A ++ +L + +F N ++ +Y + G + A ELF + +
Sbjct: 374 LMIKGYAVGGQMDDSKRL----FEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNE 429
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D V+W+S+I GY G EEALKL+ M ++ T + ACS +G +++G QL
Sbjct: 430 KDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQG-QL 488
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE-DFINQMAFDDDIVVWKSLLASCKTH 557
+ + ++D+ ++ G + EA+ F++ F ++ W +L+ H
Sbjct: 489 LHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVS--IFSPNVAAWTALINGHAYH 546
Query: 558 G 558
G
Sbjct: 547 G 547
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 177/474 (37%), Gaps = 133/474 (28%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQ-NLYNEALVAFDFLQNNTNFRIRPSTY 83
C ++D A V RR W L S K + +AL F + + T+
Sbjct: 217 CNVMDDALSVFVKMPRRDVVAWT-TLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTF 275
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC--------------- 128
++ AC L L +GR VH ++ + D + ++ Y +C
Sbjct: 276 DCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVN 335
Query: 129 ----------------GSLEDARMVFDEMPQRNVVSWTAMIAG----------------- 155
G +EDA +VF+ M + N VS+ MI G
Sbjct: 336 PCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKM 395
Query: 156 --------------CSQNGQENAAIEL--------------------------------Y 169
S+NG+ + A+EL Y
Sbjct: 396 PCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLY 455
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ M + + + TF ++ ACS L + G+ LHAH+IK+ S++ +LI MY+K
Sbjct: 456 ITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKC 515
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
I++A F SI ++ +W ++I+G + G+ S
Sbjct: 516 GSIMEAQTSFVSIFSPNVAAWTALINGHA-----------------------YHGLGS-- 550
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI-HSYIIKKGFYSNVPV- 347
EA+SLF M ++ L P+G T +L AC+ + +GM+I HS + YS P
Sbjct: 551 ---EAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSM---ERCYSVTPTL 604
Query: 348 ----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
C L ++G + + + D + + ++ AC LE+G ++
Sbjct: 605 EHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERV 658
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 160/386 (41%), Gaps = 82/386 (21%)
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
SKLD AR +F++M + SWNT+I+ + +EA+ L M + T S+L
Sbjct: 86 SKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVL 145
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTK 372
C L G IH ++K G S V +A+L A GE R+F ++
Sbjct: 146 SVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVL------ 199
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+ N+V+ + +M G YV C + A +
Sbjct: 200 ---VRRNEVLWS----------------LMLVG--------------YVTCNVMDDALSV 226
Query: 433 FNFMEDPDVVSWSSLIVGYAQF--GCGEEALKLFR-RMRSSGVRPNHVTLVGVLTACSHV 489
F M DVV+W++LI G+++ GCG +AL++FR MRS PN T V+ AC +
Sbjct: 227 FVKMPRRDVVAWTTLISGFSKNGDGCG-KALEMFRLMMRSGETTPNEFTFDCVVRACGRL 285
Query: 490 GLVEEGLQLYRIMQN---EY--------------------------GII-PTRERRSCVV 519
G++ G ++ ++ EY G++ P + ++
Sbjct: 286 GILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLI 345
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+ L GR+ +AE N M + + V + ++ G +D KR E + +S
Sbjct: 346 EGLISMGRIEDAELVFNGMT-EMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSN 404
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMK 605
++ ++Y+ +G+ ++ L K
Sbjct: 405 TMI---SVYSRNGEIDKALELFEETK 427
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++ N + Y K L AR+LF+ M VVSW+++I Y++ G EAL L M
Sbjct: 71 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 130
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEG 495
S ++ + T VL+ C+ + + +G
Sbjct: 131 RSHMKLSESTFSSVLSVCARLRCLRDG 157
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/585 (32%), Positives = 303/585 (51%), Gaps = 99/585 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILS---SKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T +++S+C++ + +GRKVH ++ S C P A N +LNMYGKCG E AR VF
Sbjct: 164 TLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVA---NSVLNMYGKCGDAETARAVF 220
Query: 139 DEMPQRNV-------------------------------VSWTAMIAGCSQNGQENAAIE 167
+ MP+R+V VSW A+IAG +QNG A+
Sbjct: 221 ERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALW 280
Query: 168 LYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ +ML S + PD+FT S++ AC+ L V +G+Q+HA++++S NALI+MY
Sbjct: 281 FFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMY 340
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
K + +A V D+ N+ S+ ++ G
Sbjct: 341 AKSGSVENARGVMQQAVMADL--------------------------NVISFTALLEGYV 374
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+ A +F M +R+++ A T+ + Y+ + G
Sbjct: 375 KLGDMKHAREMFDVMSNRDVV-----------AWTAMIVGYE---------QNGH----- 409
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+A ELFRL M+ S +P+ T V+ CA++A LE G Q+HC +++
Sbjct: 410 ------NDEAMELFRL---MIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQ 460
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFR 465
V N ++ MY + GSL AR +F+ + + V+W+S+IV AQ G GE+A+ LF
Sbjct: 461 EQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFE 520
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M GV+P+ +T VGVL+AC+HVG V+EG + ++ +Q+++GI+P +C+VDLLARA
Sbjct: 521 EMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARA 580
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G EA++FI QM + D + W SLL++C+ H N D+ + AAE +L IDP NS A L
Sbjct: 581 GLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALS 640
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
N+Y++ G+W + A++ K++ V+K G SW I ++H G D
Sbjct: 641 NVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGAD 685
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 233/468 (49%), Gaps = 47/468 (10%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
R++ D I ++ Q + N +L++Y K G L DAR VF EMP+R+ VSWT M+ G ++
Sbjct: 82 ARRLFDEIPAA--QRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNR 139
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G+ AI++++ M+ GL P QFT +++ +C+ G+GR++H+ V+K S +
Sbjct: 140 VGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPV 199
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID---GFSKLDFARTVFNEMESPNL 275
N+++ MY K A VF + + ++SW +M+ ++D A ++F M +
Sbjct: 200 ANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTI 259
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
SWN +IAG +A+ FS M + PD T+ S+L AC + + G Q+H+
Sbjct: 260 VSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHA 319
Query: 335 YIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
YI++ V NA++ A V A M M
Sbjct: 320 YILRSRMPYIGQVTNALISMYAKS--------------------GSVENARGVMQQAVMA 359
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
L+V L++ YVK G + ARE+F+ M + DVV+W+++IVGY Q
Sbjct: 360 D------------LNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQN 407
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGIIP 510
G +EA++LFR M SG PN T+ VL+ C+ + +E G Q++ R +Q + +
Sbjct: 408 GHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVS 467
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +V + AR+G + A +++ + + V W S++ + HG
Sbjct: 468 -----NSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG 510
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 172/378 (45%), Gaps = 49/378 (12%)
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY-----TKFDRILDAWNVFSS 241
+++ C G GR +HA +K+ + N L++ Y +A +F
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 242 I--ARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
I A++++ +W S++ ++K L AR VF EM + SW ++ G+ EA+
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
+F +M L P T+ ++L +C + + G ++HS+++K G S VPV N++L
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVL---- 204
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
++ G C + + + V N +
Sbjct: 205 -----------------------NMYGKCGDAETARA-------VFERMPERSVSSWNAM 234
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPN 475
+ + G + A LF M D +VSW+++I GY Q G +AL F RM S S + P+
Sbjct: 235 VSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPD 294
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
T+ VL+AC+++G+V G Q++ I+++ I + + ++ + A++G V A
Sbjct: 295 EFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIG--QVTNALISMYAKSGSVENARGV 352
Query: 535 INQMAFDD-DIVVWKSLL 551
+ Q D +++ + +LL
Sbjct: 353 MQQAVMADLNVISFTALL 370
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/650 (30%), Positives = 328/650 (50%), Gaps = 74/650 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ + C +D A +V +S R +W+ + + L E + F +++ + +
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWN-AMLGGFAQNGLAQEVMEFFSYMKRHGP---Q 407
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T+ + SAC+SL L G ++H ++ +K + + N +++MY K G+L++AR
Sbjct: 408 PDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQ 467
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F+ M + VSW A+I G Q + A ++ +M+ +G++PD+ + SI+ AC+ +
Sbjct: 468 FEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEF 527
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+Q H ++K + + ++LI MY K +L A
Sbjct: 528 KQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA---------------------- 565
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
R VF M N+ S N +IAG + S+ EA+ LF E+ L P +T LL
Sbjct: 566 ------RDVFYSMPYRNVVSINALIAGY-TMSHLEEAIHLFQEIQMVGLKPTEVTFAGLL 618
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVP-VCNAIL------------------------ 352
C L G QIH ++K GF S+ VC ++L
Sbjct: 619 DGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKG 678
Query: 353 -------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q+ + + + M + PD TF V+ ACA M+SL+ G ++H
Sbjct: 679 LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHS 738
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD-VVSWSSLIVGYAQFGCGE 458
I TG +D + L+DMY KCG + + ++F+ M + V+SW+S+IVG A+ G E
Sbjct: 739 LIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAE 798
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EAL++F++M + P+ VT +GVL+ACSH G V EG +++ +M N Y + P + C+
Sbjct: 799 EALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCM 858
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VD+L R G ++EAE+FIN++ D ++W +LL +C+ HG+ GKRAA ++++ P +S
Sbjct: 859 VDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSS 918
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
++ VLL +YA S W L MK +GV+K+PG SWIE + G
Sbjct: 919 SSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWIEPGRDVQGRG 968
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 265/558 (47%), Gaps = 85/558 (15%)
Query: 75 NFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N +RP+ T+A ++SACS L+ + G++VH + + +++MY KC +L
Sbjct: 135 NHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLR 194
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
DAR+VFD + VSWT +IAG ++G A++++ +M + G +PDQ ++I A
Sbjct: 195 DARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYV 254
Query: 193 GLCCVGLGRQLHA----------HVIKSEHGSHLISQNALIAMYTKFDRI-LDA-----W 236
L + R+L +V+ S H ++ A I+ + + + L A
Sbjct: 255 ALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEA-ISFFLELKKTGLKATRSSLG 313
Query: 237 NVFSSIARKDITSWGSMI------DGF-----------------SKLDFARTVFNEMESP 273
+V S+IA + ++GSM+ +G SK+D A+ VFN +
Sbjct: 314 SVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER 373
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
N+ WN ++ G A A E M FS M PD T S+ AC S L G Q+H
Sbjct: 374 NIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLH 433
Query: 334 SYIIKKGFYSNVPVCNAILQHQAG------------------------------------ 357
+ +IK F SN+ V NA++ A
Sbjct: 434 TVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYND 493
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E F +F M+++ PD ++ ++ ACA + + G Q HC ++K GL + L+
Sbjct: 494 EAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLI 553
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
DMYVKCG + +AR++F M +VVS ++LI GY EEA+ LF+ ++ G++P V
Sbjct: 554 DMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQMVGLKPTEV 612
Query: 478 TLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDL--LARAGRVHEAEDF 534
T G+L C ++ G Q++ ++M+ +G + + E CV L + R ++E
Sbjct: 613 TFAGLLDGCDGAFMLNLGRQIHGQVMK--WGFLSSSE-MVCVSLLCMYMNSQRFADSETL 669
Query: 535 INQMAFDDDIVVWKSLLA 552
+++ + +VVW +L++
Sbjct: 670 FSELQYPKGLVVWTALIS 687
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 142/546 (26%), Positives = 246/546 (45%), Gaps = 67/546 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S K+ EA+ F L+ T + S+ ++SA +SL L G VH +
Sbjct: 280 MISGHAKRGFAEEAISFFLELKK-TGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKE 338
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + + ++NMY KC ++ A+ VF+ + +RN+V W AM+ G +QNG +E +
Sbjct: 339 GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFF 398
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M + G PD+FTF SI AC+ L + G QLH +IK++ S+L NAL+ MY K
Sbjct: 399 SYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKS 458
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ +A F + D SW ++I G+ + ++
Sbjct: 459 GALKEARKQFEFMKIHDNVSWNAIIVGYVQEEY--------------------------- 491
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------- 341
+EA +F M ++PD +++ S++ AC + QG Q H ++K G
Sbjct: 492 -NDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGS 550
Query: 342 -----------------------YSNVPVCNAIL----QHQAGELFRLFSLMLASQTKPD 374
Y NV NA++ E LF + KP
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLEEAIHLFQEIQMVGLKPT 610
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLGSARELF 433
+TF ++ C L +G Q+H +MK G L+ V L+ MY+ + LF
Sbjct: 611 EVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLF 670
Query: 434 NFMEDPD-VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
+ ++ P +V W++LI GYAQ E+AL+ ++ MRS + P+ T VL AC+ + +
Sbjct: 671 SELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSL 730
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ G +++ ++ + G S ++D+ A+ G V + ++M + ++ W S++
Sbjct: 731 QTGQEVHSLIFHT-GFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIV 789
Query: 553 SCKTHG 558
+G
Sbjct: 790 GLAKNG 795
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 224/461 (48%), Gaps = 33/461 (7%)
Query: 93 LRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM 152
L++L + +H L +L N I+++Y KCG+++ A+ F + +++V +W ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
++ +G ++ +V M G+ P++FTF ++ ACSGL + G+Q+H V K
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGF 173
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
G Q LI MY K + DA VF DG LD
Sbjct: 174 GFRSFCQGGLIDMYAKCRNLRDARLVF---------------DGALNLD----------- 207
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
SW T+IAG EA+ +F +M +PD + + +++ A + L ++
Sbjct: 208 --TVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKL 265
Query: 333 HSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ I + NV + + A E F + + K + V+ A A+++ L
Sbjct: 266 FTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSML 325
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G+ +H +K GL +V+V + L++MY KC + +A+++FN + + ++V W++++ G+
Sbjct: 326 NYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM-QNEYGIIP 510
AQ G +E ++ F M+ G +P+ T + +AC+ + ++ G QL+ +M +N++
Sbjct: 386 AQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKF--TS 443
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+ +VD+ A++G + EA M D+ V W +++
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFEFMKIHDN-VSWNAII 483
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 9/251 (3%)
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M +P+ TF V+ AC+ + + G Q+HC + K G F GL+DMY K
Sbjct: 130 FVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAK 189
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
C +L AR +F+ + D VSW++LI GY + G EA+K+F +M+ G P+ + LV V
Sbjct: 190 CRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTV 249
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF---INQMA 539
+ A +G + + +L+ + N P + ++ A+ G EA F + +
Sbjct: 250 INAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEAISFFLELKKTG 304
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRA-AENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
S+L++ + ++ G A+ I + N L N+YA K +
Sbjct: 305 LKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAK 364
Query: 599 RLMGSMKERGV 609
++ S+ ER +
Sbjct: 365 QVFNSLGERNI 375
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 114/240 (47%), Gaps = 13/240 (5%)
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
H FN+ A + +L +H +K G+ L + N ++D+YVKCG++ A++ F+
Sbjct: 43 HNLFNE--KPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFS 100
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+E DV +W+S++ Y G ++ F M + GVRPN T VL+ACS + +
Sbjct: 101 RLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINY 160
Query: 495 GLQLY-RIMQNEYGIIPTRERRSC---VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
G Q++ + + +G R C ++D+ A+ + +A + A + D V W +L
Sbjct: 161 GKQVHCGVFKMGFGF-----RSFCQGGLIDMYAKCRNLRDAR-LVFDGALNLDTVSWTTL 214
Query: 551 LASCKTHGNVDVGKRAAENILKIDPT-NSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+A G + + + ++ + ALV + N Y + G+ + +L + V
Sbjct: 215 IAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNV 274
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/649 (29%), Positives = 309/649 (47%), Gaps = 74/649 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L A ++ D +R + W ++ S + +EAL F ++ + RI P + +
Sbjct: 65 LKDARDLFDQLPQRDEVSWT-NIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGL 123
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
C + G +H + + + + +L+MY K G + + VFDEMP RN V
Sbjct: 124 KTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAV 183
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+WTA+I G + G A + + M +S + D + + ++A + + GR +H
Sbjct: 184 TWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQT 243
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+K + N+L MY K KLD+ F
Sbjct: 244 LKKGFDENSFVANSLTTMYNKC----------------------------GKLDYGLHTF 275
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
+M + ++ SW TI+ + + F M +IP+ T +++ C + L
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL-------------------------- 359
G Q+H++++ GF + + V N+I L + GEL
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 360 --------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
F S M + KP+ V+ C +MA LE G QLH +++ GL
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L+ MY KCGS+ A ++F D++SW+++I GYA+ G +EA++LF ++ G
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG 515
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+RP+ VT +GVLTACSH G+V+ G + M +Y I P++E C++DLL RAGR+H+A
Sbjct: 516 LRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDA 575
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
E I M D VVW +LL +C+ HG+VD G+RAA +LK+DP + + L NI+A+
Sbjct: 576 ETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAK 635
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI---------HASGNDI 631
GKW+E A + MK +GV K PG S ++++ + H G DI
Sbjct: 636 GKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDI 684
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 226/492 (45%), Gaps = 67/492 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGL 177
N+ L + K L+DAR +FD++PQR+ VSWT +I+G + + A+ L+ +M LQS L
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
D F ++ C G LH +K+ + + +AL+ MY K I +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF +EM + N +W +I G+ + ++
Sbjct: 173 VF----------------------------DEMPTRNAVTWTAVITGLVRAGYSEAGLAY 204
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQ 355
FS MG ++ D L A +L G IH+ +KKGF N V N++ + ++
Sbjct: 205 FSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNK 264
Query: 356 AGEL------FR----------------------------LFSLMLASQTKPDHITFNDV 381
G+L FR F M AS P+ TF+ V
Sbjct: 265 CGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAV 324
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ CA A L+ G QLH +++ G + V N +M +Y KCG L S ++F M+ D+
Sbjct: 325 ISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDI 384
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
++WS++I Y+Q G GEEA + RMRS G +PN L VL+ C + ++E+G QL+
Sbjct: 385 ITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAH 444
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ + G+ T S ++ + A+ G + EA I ++ DDI+ W ++++ HG+
Sbjct: 445 VLS-VGLEQTSMVCSALIIMYAKCGSIAEASK-IFMDSWKDDIISWTAMISGYAEHGHSQ 502
Query: 562 VGKRAAENILKI 573
ENI K+
Sbjct: 503 EAIELFENIQKV 514
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+D+ N + + VK L AR+LF+ + D VSW+++I GY EAL+LF +M
Sbjct: 47 VDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM 106
Query: 468 R-SSGVRPNHVTLVGVLTACSHVGL-VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
R S +R + L L C +GL G L+ + G++ + S ++D+ +
Sbjct: 107 RLQSELRIDPFLLSLGLKTCG-LGLNYLYGTNLHGF-SVKTGLVNSVFVGSALLDMYMKI 164
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
G + + ++M + V W +++ G + G
Sbjct: 165 GEIGRSCKVFDEMP-TRNAVTWTAVITGLVRAGYSEAG 201
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 194/592 (32%), Positives = 302/592 (51%), Gaps = 73/592 (12%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R AD++ A ++ ++ G ++H +L D +L N++++MY KCG L A VF
Sbjct: 3 RRKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVF 62
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCV 197
MP+RNVVSWTA++ G ++G + L M S + P++FT + ++AC + +
Sbjct: 63 GGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDM 122
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G +H +++ H + N+L+ +Y+K RI DA VF DG
Sbjct: 123 AAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVF---------------DG- 166
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-----ELIPDGLT 312
TVF NL +WN +I+G A + +++ +F EM R + PD T
Sbjct: 167 -------TVFR-----NLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFT 214
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGF--YSNVPVCNAIL------------------ 352
SLL AC S + +G Q+H+ ++ +G SN + A+L
Sbjct: 215 FASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFN 274
Query: 353 -------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+ Q E LF +S + D + V+G A A +E
Sbjct: 275 RLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQ 334
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G Q+HCY +KT LDV V N L+DMY KCG A F + +VVSW+++I G +
Sbjct: 335 GRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGK 394
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G G+EA+ +F MR+ GV P+ V + +L+ACSH GLVEE + + ++++ + P E
Sbjct: 395 HGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAE 454
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+C+VDLL RAG + EA+D + M + VW++LL++C+ H NV VG+ A E +L I
Sbjct: 455 HYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAI 514
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
D N V+L NI+A +G W E R+ G+M+ RG+RK G SW+E+ + H
Sbjct: 515 DGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAH 566
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 209/692 (30%), Positives = 337/692 (48%), Gaps = 113/692 (16%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHD 104
+W+ L S + +L+ +A+ F + + T F T +I AC + ++LG VH
Sbjct: 162 LWN-ALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHG 220
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
L +K D + N ++ MYGK G +E A VFD+MPQRN+VSW +++ C +NG
Sbjct: 221 FALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEE 280
Query: 165 AIELYVQMLQ--SGLMPDQFTFGSIIRACSGLCCVGLGRQLH------------------ 204
+ L+ +L GLMPD T ++I C+ V LG H
Sbjct: 281 SYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSL 340
Query: 205 ------------AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS--- 249
A V+ + ++IS N++I Y+K A+ + + +D
Sbjct: 341 LDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNE 400
Query: 250 --------------------------------------WGSMIDGFSK---LDFARTVFN 268
+ + G++K L +A VF
Sbjct: 401 VTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFC 460
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
MES ++SWN +I G +A+ L+ M L PD T+ SLL AC SL
Sbjct: 461 GMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSC 520
Query: 329 GMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELF-------------------------- 360
G +IH +++ GF + +C ++ L Q G++
Sbjct: 521 GKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQ 580
Query: 361 --------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+F ML+S+ PD I+ +GAC+ +++L +G +LHC+ +K+ L FV
Sbjct: 581 NEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFV 640
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
L+DMY KCG + ++ +F+ + V+W+ LI GY G G +A++LF+ M+++G
Sbjct: 641 TCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGF 700
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
RP+ VT + +LTAC+H GLV EGL+ MQ+ +GI P E +CVVD+L RAGR++EA
Sbjct: 701 RPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEAL 760
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
+ +N++ D +W SLL+SC+ + ++D+G++ A +L++ P + VL+ N YA G
Sbjct: 761 ELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLG 820
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
KW+EV ++ MKE G++K G SWIEI K+
Sbjct: 821 KWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKV 852
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/553 (25%), Positives = 251/553 (45%), Gaps = 90/553 (16%)
Query: 51 FSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYAD------LISACSSLRSLQLGRKVHD 104
F +LC N+A F+FLQ+N N + S L+ C +++++GRK+H+
Sbjct: 61 FHNLCNTGNLNQA---FNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHN 117
Query: 105 HILSSK-CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
I +S Q D VL ++ MY C S D+ +VF+ ++N+ W A+++G +N
Sbjct: 118 FISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFR 177
Query: 164 AAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+ ++V+M+ + +PD FT +I+AC G+ V LG +H +K++ S + NAL
Sbjct: 178 DAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNAL 237
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
IAMY KF + A VF + ++ NL SWN+++
Sbjct: 238 IAMYGKFGFVESAVKVFDKMPQR----------------------------NLVSWNSVM 269
Query: 283 AGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
E+ LF + GD L+PD T+ +++ C + GM H +K G
Sbjct: 270 YACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLG 329
Query: 341 FYSNVPVCNAILQ--------------------------------------HQAGELFRL 362
+ V +++L A EL R
Sbjct: 330 LCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLR- 388
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYV 421
+ + + K + +T +V+ C ++H Y ++ G + D V N + Y
Sbjct: 389 -KMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYA 447
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCGSL A +F ME V SW++LI G+ Q G +AL L+ MR SG+ P+ T+
Sbjct: 448 KCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIAS 507
Query: 482 VLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV--VDLLARAGRVHEAEDFINQM 538
+L+AC+ + + G +++ +++N + + + C+ V L + G++ A+ F + M
Sbjct: 508 LLSACARLKSLSCGKEIHGSMLRNGFEL----DEFICISLVSLYVQCGKILLAKLFFDNM 563
Query: 539 AFDDDIVVWKSLL 551
+ ++V W +++
Sbjct: 564 E-EKNLVCWNTMI 575
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSL 426
+S +KP + ++ C ++E+G ++H +I + DV ++ L+ MY C S
Sbjct: 87 SSNSKPKQL-IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSP 145
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTA 485
+ +FN ++ W++L+ GY + +A+ +F M S + P++ TL V+ A
Sbjct: 146 YDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKA 205
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C V V G ++ + ++ + ++ + + G V A ++M ++V
Sbjct: 206 CVGVYDVRLGEAVHGFAL-KTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLV 263
Query: 546 VWKSLLASCKTHG 558
W S++ +C +G
Sbjct: 264 SWNSVMYACLENG 276
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 315/615 (51%), Gaps = 69/615 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHIL 107
+ K + + AL F +++++ +RP Y L+ C L+ G+++H ++
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDS---VRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVI 57
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+S + ++NMY KC + DA +FD MP+R++V W MI+G +QNG A+
Sbjct: 58 TSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALM 117
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L ++M + G PD T SI+ A + + +G +H +V+++ S + AL+ MY+
Sbjct: 118 LVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYS 177
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K + A +F + + + SW SMIDG+
Sbjct: 178 KCGSVSIARVIFDGMDHRTVVSWNSMIDGY----------------------------VQ 209
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+A AM +F +M D + P +TV L AC L +G +H + + S+V V
Sbjct: 210 SGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 348 CNAILQHQ--------AGELFR----------------------------LFSLMLASQT 371
N+++ A ++F+ F M +
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI 329
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
KPD T V+ A A ++ +H +++ L +VFVM L+DMY KCG++ +AR+
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
LF+ M V++W+++I GY G G+ +++LF+ M+ ++PN +T + L+ACSH GL
Sbjct: 390 LFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGL 449
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
VEEGL + M+ +YGI PT + +VDLL RAGR+++A DFI +M I V+ ++L
Sbjct: 450 VEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAML 509
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
+CK H NVD+G++AA I K++P + VLL NIYA++ W +VA++ M++ G++K
Sbjct: 510 GACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQK 569
Query: 612 VPGQSWIEIQTKIHA 626
PG S +EI ++H+
Sbjct: 570 TPGCSLVEIGNEVHS 584
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 297/574 (51%), Gaps = 64/574 (11%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
PD VL LN K G L DA +FD MP++NVV+WT++++GC++NG+ AA+ ++ M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADM 105
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
++SG+ P+ F + + AC+ L + G Q+H+ +++ + LI MY++ +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMES----PNLASWNTIIAGV 285
A VF + D+ + S+I F + + A +M PN + TI+
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 286 ASCSNANEAMSLFSEMGDRE------------------LIPDGLTVRSLLCACTSPLSLY 327
L ++G R + P+ + +L AC S +
Sbjct: 226 PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGS---IG 282
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAIL----------------------------------- 352
G Q+H IK +++ V NA+L
Sbjct: 283 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 342
Query: 353 QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q+ GE L M + P+ F+ V+ +CA +ASL+ G Q HC +K G ++
Sbjct: 343 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 402
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
N L++MY KCG +GSAR F+ M DV SW+SLI G+AQ G +AL++F +MRS+G
Sbjct: 403 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 462
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
++P+ T +GVL C+H G+VEEG +R+M ++Y P +C++D+L R GR EA
Sbjct: 463 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 522
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
IN M F+ D ++WK+LLASCK H N+D+GK AA+ ++++ +SA+ VL+ NIYA
Sbjct: 523 LRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMH 582
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
G+WE+ ++ M E GV+K G SWIEI ++H
Sbjct: 583 GEWEDARKVRRRMDETGVKKDAGCSWIEINNEVH 616
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 296/581 (50%), Gaps = 64/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++ C++ ++L+ G+ +H I+ + + + +++MY KCG DA VF +
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ ++V W+A+I Q GQ +I+L+ M +P+Q+T S++ A + + G+
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+HA V K + + NAL+ MY K + D ++ S+ +D
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD--------------- 480
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
L SWN ++G+ C + +++F M + IP+ T S+L +C+
Sbjct: 481 -------------LISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------- 353
++ G Q+H++IIK N VC A++
Sbjct: 528 CLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTV 587
Query: 354 --------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+Q + F M KP+ T + C+++ASLE G QLH + K+G
Sbjct: 588 IITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
D+FV + L+DMY KCG + A LF + D ++W+++I GYAQ G G +AL FR
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M G+ P+ VT G+L+ACSH GLVEEG + + M ++GI PT + +C+VD+L R
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRV 767
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G+ E EDFI +M + ++W+++L + K H N+ +G++AA + ++ P ++ +LL
Sbjct: 768 GKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLS 827
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
NI+A+ G+W++V R+ M +GV+K PG SW+E ++H
Sbjct: 828 NIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHT 868
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 255/547 (46%), Gaps = 71/547 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
L L + N+++ F +QN I P+ T A + ACS +L LG+++H
Sbjct: 184 LIQGLVAEGFANDSIYLFQEMQNEG---IMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
D + + ++++Y KCG +E A +F MP++N V+W ++ G +Q G ++
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L+ M++ + ++FT ++++ C+ + G+ +H+ +IK + + L+ MY+
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K +DA VF +I + DI W ++I T ++
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALI----------TCLDQQ----------------- 393
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+ E++ LF M + +P+ T+ SLL A T+ +L G IH+ + K GF ++V V
Sbjct: 394 -GQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAV 452
Query: 348 CNAILQ--------HQAGELFR----------------------------LFSLMLASQT 371
NA++ H +L+ +F ML
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGF 512
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
P+ TF ++G+C+ + + G Q+H +I+K L + FV L+DMY KC L A
Sbjct: 513 IPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADV 572
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
FN + D+ +W+ +I YAQ GE+AL FR+M+ GV+PN TL G L+ CS +
Sbjct: 573 AFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLAS 632
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+E G QL+ M + G + S +VD+ A+ G + EAE + D + W +++
Sbjct: 633 LEGGQQLHS-MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Query: 552 ASCKTHG 558
+G
Sbjct: 691 CGYAQNG 697
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 239/521 (45%), Gaps = 71/521 (13%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y+ ++ C+S RSL + + +H I+ PD+ L ++N+Y KC AR+V +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R+VVSWTA+I G G N +I L+ +M G+MP++FT + ++ACS + LG+Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+HA K L +AL+ +Y K I A +F + +
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQ----------------- 277
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
N +WN ++ G A + + LF M + ++ + T+ ++L C +
Sbjct: 278 -----------NDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCAN 326
Query: 323 PLSLYQGMQIHSYIIKKGFYSN-------------------------------VPVCNAI 351
+L QG IHS IIK G+ N + V +A+
Sbjct: 327 SKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSAL 386
Query: 352 L-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ Q Q+ E +LF LM T P+ T ++ A +L+ G +H + K G
Sbjct: 387 ITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGF 446
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV V N L+ MY+K G + +L+ M D D++SW++ + G G + L +F
Sbjct: 447 ETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYH 506
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARA 525
M G PN T + +L +CS + V G Q++ I++N+ + + ++D+ A+
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ--LDDNNFVCTALIDMYAKC 564
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
+ +A+ N+++ D+ W ++ + + + G++A
Sbjct: 565 MYLEDADVAFNRLSV-RDLFTWTVIITN---YAQTNQGEKA 601
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 304/560 (54%), Gaps = 64/560 (11%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC 128
F + + + +TY ++IS S+ L GRK+H I+++ D V+ ++NMYGKC
Sbjct: 196 FKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKC 255
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
GS +AR VFD+M +R++VSW MI QNG + A+ELY ++ G + TF SI+
Sbjct: 256 GSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSIL 315
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
ACS + + GR +H+H+++ S + AL+ MY K
Sbjct: 316 GACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC------------------- 356
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS---CSNANEAMSLFSEMGDRE 305
L+ AR VFN M++ + +W+T+I AS +A +A +F +G R+
Sbjct: 357 ---------GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSL 365
I C + + I +Y+ N A+ ++FR +
Sbjct: 408 TI------------CWNAM-------ITTYV------QNGCAVAAM------KIFR--EM 434
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
A+ KPD +TF V+ ACA++ L LH I ++ L +V V N L++MY +CGS
Sbjct: 435 TGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGS 494
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L A LF ++ VVSW++++ ++Q+G EAL LF+ M GV+P+ VT +L
Sbjct: 495 LEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFV 554
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C+H G +E+G + + M +G+ PT + + +VDLL R+GR+ +A++ + M F+ D V
Sbjct: 555 CTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPV 614
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
W + L +C+ HG +++G+ AAE + ++DP+++A + + NIYA+ G WE+VA + M+
Sbjct: 615 AWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKME 674
Query: 606 ERGVRKVPGQSWIEIQTKIH 625
ERG++K+PG S+IE+ K+H
Sbjct: 675 ERGLKKLPGLSFIEVDGKLH 694
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/579 (29%), Positives = 285/579 (49%), Gaps = 68/579 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +CSS + GR +H+ I S+ + D ++ N +++MYGKC SL DAR VF+ M
Sbjct: 9 TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 142 P--QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
QRNVVSW AMIA +QNG A+ LY +M GL D TF S++ ACS L
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL---AQ 125
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR++H V S S NAL+ MY +F + DA +F S+ +D TSW ++I S+
Sbjct: 126 GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQ 185
Query: 260 ---LDFARTVFNEME---SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
A +F EM+ PN ++ +I+G ++ E + +E+ D +
Sbjct: 186 SGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVA 245
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----HQAGELFRLFSLMLAS 369
+L+ S ++ ++ + K+ S + +Q H+A EL++ +
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFK 305
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+TK TF ++GAC+++ +L G +H +I++ GL +V V L++MY KCGSL A
Sbjct: 306 RTKA---TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEA 362
Query: 430 RELFNFMEDPDVVSWSSLIVGYA----------------------------------QFG 455
R++FN M++ D V+WS+LI YA Q G
Sbjct: 363 RKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNG 422
Query: 456 CGEEALKLFRRMR-SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPT 511
C A+K+FR M ++G++P+ VT + VL AC+ +G + E L+ + E ++ T
Sbjct: 423 CAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVT 482
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAA 567
+ ++++ AR G + EAE A + +V W +++A+ +G +D+ +
Sbjct: 483 ----NTLINMYARCGSLEEAERLF-AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD 537
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
+K D +++ +C G E+ R M E
Sbjct: 538 LEGVKPDDVTYTSILFVCT---HGGSLEQGWRYFTDMAE 573
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 202/449 (44%), Gaps = 66/449 (14%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD TF +++ +CS V GR LH + S + NALI+MY K D ++DA +V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F S+ + N+ SWN +IA A ++ EA+ L+
Sbjct: 65 FESM--------------------------DWRQRNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-- 356
M + L D +T S+L AC+ SL QG +IH+ + G S + NA++ A
Sbjct: 99 WRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 357 ---GELFRLF-SLMLASQT-----------------------------KPDHITFNDVMG 383
G+ R+F SL +T KP+ T+ +V+
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVIS 215
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+ L G ++H I+ G D+ V L++MY KCGS ARE+F+ M+ D+VS
Sbjct: 216 GFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS 275
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+ +I Y Q G EAL+L++++ G + T V +L ACS V + +G +L
Sbjct: 276 WNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHI 334
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
E G+ + +V++ A+ G + EA N M + D V W +L+ + ++G
Sbjct: 335 LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDA 393
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSG 592
++A + ++ ++ + Y +G
Sbjct: 394 RKARKVFDRLGSRDTICWNAMITTYVQNG 422
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 9/191 (4%)
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+PD++TF V+ +C++ + G LH I + D V N L+ MY KC SL AR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 432 LFNFME--DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+F M+ +VVSW+++I YAQ G EAL L+ RM G+ +HVT V VL ACS +
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 490 GLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+G +++ R+ + G+ + + +V + AR G V +A+ + D+ W
Sbjct: 124 A---QGREIHNRVFYS--GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDE-TSWN 177
Query: 549 SLLASCKTHGN 559
+++ + G+
Sbjct: 178 AVILAHSQSGD 188
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/605 (31%), Positives = 305/605 (50%), Gaps = 68/605 (11%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLIS--ACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
E L F + + RP Y I+ +CS L+ L+LG+ +H + K D + +
Sbjct: 85 ETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGS 144
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLM 178
++ +Y KCG + DA VF E P+++VV WT++I G QNG A+ + +M+ +
Sbjct: 145 ALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVS 204
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD T S AC+ L LGR +H V + + L N+++ +Y K I A N+
Sbjct: 205 PDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANL 264
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + KDI S W++++A A A++LF
Sbjct: 265 FREMPYKDIIS----------------------------WSSMVACYADNGAETNALNLF 296
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----- 353
+EM D+ + + +TV S L AC S +L +G IH + GF ++ V A++
Sbjct: 297 NEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKC 356
Query: 354 ---HQAGELFR----------------------------LFSLMLASQTKPDHITFNDVM 382
A +LF +F ML+ T+PD I ++
Sbjct: 357 FSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKIL 416
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A + + ++ LH ++ K+G + F+ L+++Y KC S+ +A ++F M DVV
Sbjct: 417 AASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVV 476
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+WSS+I Y G GEEALKLF +M + S V+PN VT V +L+ACSH GL+EEG++++ +
Sbjct: 477 TWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHV 536
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M NEY ++P E +VDLL R G + +A D IN+M VW +LL +C+ H N+
Sbjct: 537 MVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIK 596
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+G+ AA N+ +DP ++ LL NIY W + A+L +KE +K+ GQS +EI+
Sbjct: 597 IGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIK 656
Query: 622 TKIHA 626
++H+
Sbjct: 657 NEVHS 661
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 233/520 (44%), Gaps = 73/520 (14%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R L+ C S S+ ++H L D+ + + +Y + SL A +F
Sbjct: 3 RRDLLVKLLETCCSKISIP---QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLF 59
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM---PDQFTFGSIIRACSGLC 195
+E P + V W A++ G+ + L+ QM + PD +T +++CSGL
Sbjct: 60 EETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQ 119
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ LG+ +H + K + + + +ALI +Y+K ++ DA VF+ ++D+ W S+I
Sbjct: 120 KLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIIT 179
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVR 314
G+ + SP L A++ FS M E + PD +T+
Sbjct: 180 GYE----------QNGSPEL------------------ALAFFSRMVVLEQVSPDPVTLV 211
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR----- 361
S AC G +H ++ ++GF + + + N+IL A LFR
Sbjct: 212 SAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYK 271
Query: 362 -----------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
LF+ M+ + + + +T + ACA+ ++LE G +H
Sbjct: 272 DIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIH 331
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+ G LD+ V LMDMY+KC S +A +LFN M DVVSW+ L GYA+ G
Sbjct: 332 KLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAH 391
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
++L +F M S G RP+ + LV +L A S +G+V++ L L+ + G + +
Sbjct: 392 KSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKS-GFDNNEFIGASL 450
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++L A+ + A M D+V W S++A+ HG
Sbjct: 451 IELYAKCSSIDNANKVFKGMR-RKDVVTWSSIIAAYGFHG 489
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
QLH +K GLA D FV+ L +Y + SL A +LF V W++L+ Y G
Sbjct: 22 QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81
Query: 456 CGEEALKLFRRMRSSGV---RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
E L LF +M + + RP++ T+ L +CS + +E G ++ ++ + I
Sbjct: 82 KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKK-KIDNDM 140
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
S +++L ++ G++++A + D+V+W S++ + +G+ ++
Sbjct: 141 FVGSALIELYSKCGQMNDAVKVFTEYP-KQDVVLWTSIITGYEQNGSPELA 190
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 197/616 (31%), Positives = 320/616 (51%), Gaps = 65/616 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L KQ ++EA+ + + + T+ ++ C + L G++VH H++
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY 225
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + N ++ MY KCG ++ AR++FD MP+R+++SW AMI+G +NG + +EL+
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M + PD T S+I AC L LGR +HA+VI + + N+L MY
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+A +FS + RKDI SW +MI G+ +N +
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYE--------YNFL------------------- 378
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
++A+ + M + PD +TV ++L AC + L G+++H IK S V V N
Sbjct: 379 -PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 350 AILQ--------HQAGELF----------------------RLF-SLMLASQTK----PD 374
++ +A ++F R F +L+ Q K P+
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPN 497
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
IT + ACA + +L G ++H ++++TG+ LD F+ N L+DMYV+CG + +A FN
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ DV SW+ L+ GY++ G G ++LF RM S VRP+ +T + +L CS +V +
Sbjct: 558 -SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQ 616
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
GL + M+ +YG+ P + +CVVDLL RAG + EA FI +M D VW +LL +C
Sbjct: 617 GLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H +D+G+ +A++I ++D + +LLCN+YA GKW EVA++ MKE G+ G
Sbjct: 676 RIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAG 735
Query: 615 QSWIEIQTKIHASGND 630
SW+E++ K+HA +D
Sbjct: 736 CSWVEVKGKVHAFLSD 751
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 156/577 (27%), Positives = 262/577 (45%), Gaps = 84/577 (14%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
LC EA+ + +Q + + L+ C R+ + G KV+ LSS
Sbjct: 69 LCANGKLEEAMKLLNSMQE-LRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
L N L M+ + G+L DA VF +M +RN+ SW ++ G ++ G + A+ LY +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 174 Q-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
G+ PD +TF ++R C G+ + G+++H HV++ + + NALI MY K +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
A +F + R+DI SW +MI G+ + N M +
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFE--------NGM--------------------CH 279
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
E + LF M + PD +T+ S++ AC G IH+Y+I GF ++ VCN++
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 353 Q--------HQAGELFR----------------------------LFSLMLASQTKPDHI 376
Q +A +LF + +M KPD I
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T V+ ACA + L+ G +LH +K L V V N L++MY KC + A ++F+ +
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+V+SW+S+I G EAL R+M+ + ++PN +TL L AC+ +G + G
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGK 518
Query: 497 QLY-RIMQNEYGI---IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+++ +++ G+ +P + ++D+ R GR++ A N D+ W LL
Sbjct: 519 EIHAHVLRTGVGLDDFLP-----NALLDMYVRCGRMNTAWSQFNSQK--KDVTSWNILLT 571
Query: 553 SCKTHGN----VDVGKRAAENILKIDPTNSAALVLLC 585
G V++ R ++ ++ P + LLC
Sbjct: 572 GYSERGQGSMVVELFDRMVKS--RVRPDEITFISLLC 606
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 198/446 (44%), Gaps = 79/446 (17%)
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ G NG+ A++L M + + D+ F +++R C G ++++ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
+ NA +AM+ +F ++DAW VF ++ +++ SW ++ G++K +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY---------- 175
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEM---GDRELIPDGLTVRSLLCACTSPLSLYQG 329
+EAM L+ M G + PD T +L C L +G
Sbjct: 176 ------------------FDEAMCLYHRMLWVGG--VKPDVYTFPCVLRTCGGIPDLARG 215
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQAG-------------------------------- 357
++H ++++ G+ ++ V NA++
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 358 ----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
E LF M PD +T V+ AC + +G +H Y++ TG A+D+ V
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L MY+ GS A +LF+ ME D+VSW+++I GY ++A+ +R M V+
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQN----EYGIIPTRERRSCVVDLLARAGRVH 529
P+ +T+ VL+AC+ +G ++ G++L+++ Y I+ ++++ ++ +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LINMYSKCKCID 450
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCK 555
+A D + + +++ W S++A +
Sbjct: 451 KALDIFHNIP-RKNVISWTSIIAGLR 475
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 41/290 (14%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E +L + M + D F ++ C + E G++++ + + +L V + N +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNH 476
M+V+ G+L A +F M + ++ SW+ L+ GYA+ G +EA+ L+ RM GV+P+
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 477 VTLVGVLTACS-----------HVGLVEEGLQLYRIMQNE-----------------YGI 508
T VL C HV +V G +L + N +
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 509 IPTRERRS--CVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVG 563
+P R+ S ++ G HE + M + D D++ S++++C+ G+ +G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 564 KRAAENILKIDPTNSAALVLLCN----IYASSGKWEEVARLMGSMKERGV 609
+ ++ T A + +CN +Y ++G W E +L M+ + +
Sbjct: 317 RDIHAYVI---TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 296/581 (50%), Gaps = 64/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++ C++ ++L+ G+ +H I+ + + + +++MY KCG DA VF +
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ ++V W+A+I Q GQ +I+L+ M +P+Q+T S++ A + + G+
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+HA V K + + NAL+ MY K + D ++ S+ +D
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRD--------------- 480
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
L SWN ++G+ C + +++F M + IP+ T S+L +C+
Sbjct: 481 -------------LISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------- 353
++ G Q+H++IIK N VC A++
Sbjct: 528 CLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTV 587
Query: 354 --------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+Q + F M KP+ T + C+++ASLE G QLH + K+G
Sbjct: 588 IITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
D+FV + L+DMY KCG + A LF + D ++W+++I GYAQ G G +AL FR
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M G+ P+ VT G+L+ACSH GLVEEG + + M ++GI PT + +C+VD+L R
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRV 767
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G+ E EDFI +M + ++W+++L + K H N+ +G++AA + ++ P ++ +LL
Sbjct: 768 GKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLS 827
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
NI+A+ G+W++V R+ M +GV+K PG SW+E ++H
Sbjct: 828 NIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHT 868
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 255/547 (46%), Gaps = 71/547 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
L L + N+++ F +QN I P+ T A + ACS +L LG+++H
Sbjct: 184 LIQGLVAEGFANDSIYLFQEMQNEG---IMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
D + + ++++Y KCG +E A +F MP++N V+W ++ G +Q G ++
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L+ M++ + ++FT ++++ C+ + G+ +H+ +IK + + L+ MY+
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K +DA VF +I + DI W ++I T ++
Sbjct: 361 KCGLAIDAIGVFKTIKKPDIVVWSALI----------TCLDQQ----------------- 393
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+ E++ LF M + +P+ T+ SLL A T+ +L G IH+ + K GF ++V V
Sbjct: 394 -GQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAV 452
Query: 348 CNAILQ--------HQAGELFR----------------------------LFSLMLASQT 371
NA++ H +L+ +F ML
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGF 512
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
P+ TF ++G+C+ + + G Q+H +I+K L + FV L+DMY KC L A
Sbjct: 513 IPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADV 572
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
FN + D+ +W+ +I YAQ GE+AL FR+M+ GV+PN TL G L+ CS +
Sbjct: 573 AFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLAS 632
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+E G QL+ M + G + S +VD+ A+ G + EAE + D + W +++
Sbjct: 633 LEGGQQLHS-MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Query: 552 ASCKTHG 558
+G
Sbjct: 691 CGYAQNG 697
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 239/521 (45%), Gaps = 71/521 (13%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y+ ++ C+S RSL + + +H I+ PD+ L ++N+Y KC AR+V +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R+VVSWTA+I G G N +I L+ +M G+MP++FT + ++ACS + LG+Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+HA K L +AL+ +Y K I A +F + +
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQ----------------- 277
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
N +WN ++ G A + + LF M + ++ + T+ ++L C +
Sbjct: 278 -----------NDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCAN 326
Query: 323 PLSLYQGMQIHSYIIKKGFYSN-------------------------------VPVCNAI 351
+L QG IHS IIK G+ N + V +A+
Sbjct: 327 SKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSAL 386
Query: 352 L-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ Q Q+ E +LF LM T P+ T ++ A +L+ G +H + K G
Sbjct: 387 ITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGF 446
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV V N L+ MY+K G + +L+ M D D++SW++ + G G + L +F
Sbjct: 447 ETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYH 506
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARA 525
M G PN T + +L +CS + V G Q++ I++N+ + + ++D+ A+
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ--LDDNNFVCTALIDMYAKC 564
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
+ +A+ N+++ D+ W ++ + + + G++A
Sbjct: 565 MYLEDADVAFNRLSV-RDLFTWTVIITN---YAQTNQGEKA 601
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 305/591 (51%), Gaps = 71/591 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TYA ++ACS ++ G+ VH ++ L N + +MY +CG + +AR VFD
Sbjct: 104 TYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAA 163
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC----- 196
+R+ VSW A+++G + G +E++ M + GL + F GSII+ C+
Sbjct: 164 EERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAG 223
Query: 197 -VGLGR---QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
VG GR +H V+K+ + L +A+I MY K + +A +F S+ ++ +
Sbjct: 224 DVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNA 283
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
MI GF + + A A EA+ L+SE+ R + P +
Sbjct: 284 MIAGFCREEAADV-------------------------AREALGLYSELQSRGMQPSEFS 318
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------------- 357
S+L AC G QIH ++K F +V + +A++ +G
Sbjct: 319 FSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLP 378
Query: 358 -----------------ELF----RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
ELF RLF + +PD + VM ACA++A G Q
Sbjct: 379 KQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQ 438
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+ C +K+G + N + M + G + +A F ME DVVSWS++I +A GC
Sbjct: 439 IQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGC 498
Query: 457 GEEALKLFRRMRSSGVRP-NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+AL +F M + V P N +T + +LTACSH GLV+EGL+ Y IM +EYG+ PT +
Sbjct: 499 ARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHC 558
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+CVVDLL RAGR+ +AE FI AF DD VVW+SLLASC+ HG+++ G+ A+ I+ ++P
Sbjct: 559 TCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEP 618
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
T+SA+ V+L N+Y +G+ ++ MKERGV+K PG SWIE+ + +H+
Sbjct: 619 TSSASYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHS 669
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 246/550 (44%), Gaps = 33/550 (6%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG---SLEDARMVFD 139
Y L+ +C++L + VH H+ + L N +L Y + G L AR++ D
Sbjct: 5 YLHLLRSCAALPHVA---AVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLL-D 60
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EMP+RN VS+ +I S+ G ++ + + + D+FT+ + + ACS V
Sbjct: 61 EMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRT 120
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +HA V+ G+ L N++ +MY + + +A VF + +D SW +++ G+ +
Sbjct: 121 GKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVR 180
Query: 260 L---DFARTVFNEMESPNLASWNTIIAG-VASCSNANEAMSLFSEMGDREL--------I 307
+ VF+ M L WN+ G + C ++ + + ++G + +
Sbjct: 181 AGAREETLEVFSLMCRHGLG-WNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVV 239
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAIL----QHQAGELFR- 361
GL L + + +G ++ + K NV V NA++ + +A ++ R
Sbjct: 240 KAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVARE 299
Query: 362 ---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
L+S + + +P +F+ ++ AC G Q+H ++K DV++ + L+D
Sbjct: 300 ALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALID 359
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
+Y G + F + DVV W+S+I G Q EEAL+LF+ G+RP+
Sbjct: 360 LYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFA 419
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ V+ AC+ + + G Q+ + + + G + + + AR+G V A +M
Sbjct: 420 MSSVMNACASLAVARTGEQI-QCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEM 478
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL--KIDPTNSAALVLLCNIYASSGKWEE 596
D+V W ++++S HG +L K+ P N + + + G +E
Sbjct: 479 E-SRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDE 537
Query: 597 VARLMGSMKE 606
R G M +
Sbjct: 538 GLRYYGIMND 547
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 311/600 (51%), Gaps = 73/600 (12%)
Query: 65 VAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
VAF I+PS T L+S L LQ +H ++ D L N +L
Sbjct: 132 VAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSML 188
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
N+Y KCG +EDA+ +F+ M R+V+SW ++++G +Q G ++L ++M G+ PDQ
Sbjct: 189 NVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQ 248
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFS 240
TFGS++ A + +G+G+ +H H++++ E SH+ + +LI MY K + A+ +F
Sbjct: 249 TFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI--ETSLIGMYLKCGNVNSAFRIFE 306
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ KD+ SW +M I+G+ A+ A+++F
Sbjct: 307 GMMHKDVISWTAM----------------------------ISGLVQNDCADMAVTVFRR 338
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------- 352
M ++P T+ S+L AC S G +H YI+++ ++P N+++
Sbjct: 339 MLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398
Query: 353 -------------------------QHQAGELFR---LFSLMLASQTKPDHITFNDVMGA 384
Q G L + LF+ M ++ +PD IT ++ A
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA++ +L G +H ++ K+ L + + L+DMY KCG LGSA++ F+ M D+VSW
Sbjct: 459 CASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSW 518
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
SS+I GY G GE AL+++ +G++PNHV + +L+ACSH GLV++GL + M
Sbjct: 519 SSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTK 578
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
++GI P E R+C+VDLL+RAGRV EA F +M + V LL +C+T GNV++G
Sbjct: 579 DFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGD 638
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
A I+ + P N+ V L + YAS +W+ V + MK ++K+PG S+IE+ I
Sbjct: 639 IVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTI 698
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/545 (23%), Positives = 222/545 (40%), Gaps = 110/545 (20%)
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
S+ A+I S G + Y ML + PD TF S+++AC+ L G H V
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFAR 264
I + S +LI Y+KF A VF ++ +++ W +MI +++ D A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 265 TVFNEMESPNLASWNTIIAGVAS------------------------------------C 288
+++N M + + + G+ S C
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKC 194
Query: 289 SNANEAMSLFSEMGDRELI-------------------------------PDGLTVRSLL 317
+A +LF M R++I PD T SL+
Sbjct: 195 GRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLV 254
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSN--------------------------------- 344
A L G +H +I++ G +
Sbjct: 255 SAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVI 314
Query: 345 --VPVCNAILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ + ++Q+ ++ +F ML S+ P T V+ ACA + S +GT +H YI
Sbjct: 315 SWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYI 374
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ + LD+ N L+ MY KCG L + +F+ M D+VSW++++ G+AQ G +AL
Sbjct: 375 LRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKAL 434
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF MR + RP+ +T+V +L AC+ +G + +G ++ + + P + +VD+
Sbjct: 435 LLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC-LGPCILIDTALVDM 493
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSA 579
++ G + A+ ++M D+V W S++A +HG + R + L I P +
Sbjct: 494 YSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVI 552
Query: 580 ALVLL 584
L +L
Sbjct: 553 YLSIL 557
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 151/352 (42%), Gaps = 51/352 (14%)
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
+P S+N II +++ + + +S M + PD T SL+ ACTS G+
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 332 IHSYIIKKGFYSNVPVCNAILQH---------------------------------QAGE 358
H +I G+ S+ + +++ +AGE
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 359 ---LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
F ++++M +P +T ++ + L+ LH +++ G DV + N
Sbjct: 130 HDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANS 186
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
++++Y KCG + A+ LF M+ DV+SW+SL+ GYAQ G E L+L RM++ G+ P+
Sbjct: 187 MLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPD 246
Query: 476 HVTLVGVLTACSH-----VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
T +++A + VG + G L ++ + I + ++ + + G V+
Sbjct: 247 QQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI------ETSLIGMYLKCGNVNS 300
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
A M D++ W ++++ + D+ +LK S A +
Sbjct: 301 AFRIFEGM-MHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATI 351
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 311/600 (51%), Gaps = 73/600 (12%)
Query: 65 VAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
VAF I+PS T L+S L LQ +H ++ D L N +L
Sbjct: 132 VAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSML 188
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
N+Y KCG +EDA+ +F+ M R+V+SW ++++G +Q G ++L ++M G+ PDQ
Sbjct: 189 NVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQ 248
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFS 240
TFGS++ A + +G+G+ +H H++++ E SH+ + +LI MY K + A+ +F
Sbjct: 249 TFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI--ETSLIGMYLKCGNVNSAFRIFE 306
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ KD+ SW +M I+G+ A+ A+++F
Sbjct: 307 GMMHKDVISWTAM----------------------------ISGLVQNDCADMAVTVFRR 338
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------- 352
M ++P T+ S+L AC S G +H YI+++ ++P N+++
Sbjct: 339 MLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398
Query: 353 -------------------------QHQAGELFR---LFSLMLASQTKPDHITFNDVMGA 384
Q G L + LF+ M ++ +PD IT ++ A
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA++ +L G +H ++ K+ L + + L+DMY KCG LGSA++ F+ M D+VSW
Sbjct: 459 CASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSW 518
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
SS+I GY G GE AL+++ +G++PNHV + +L+ACSH GLV++GL + M
Sbjct: 519 SSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTK 578
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
++GI P E R+C+VDLL+RAGRV EA F +M + V LL +C+T GNV++G
Sbjct: 579 DFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGD 638
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
A I+ + P N+ V L + YAS +W+ V + MK ++K+PG S+IE+ I
Sbjct: 639 IVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTI 698
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/545 (23%), Positives = 223/545 (40%), Gaps = 110/545 (20%)
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
S+ A+I S G + Y ML + PD TF S+++AC+ L G H V
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFAR 264
I + S +LI Y+KF A VF ++ +++ W +MI +++ D A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 265 TVFNEMESPNLASWNTIIAGVAS------------------------------------C 288
+++N M + + + G+ S C
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKC 194
Query: 289 SNANEAMSLFSEMGDRELI-------------------------------PDGLTVRSLL 317
+A +LF M R++I PD T SL+
Sbjct: 195 GRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLV 254
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSN--------------------------------- 344
A L G +H +I++ G +
Sbjct: 255 SAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVI 314
Query: 345 --VPVCNAILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ + ++Q+ ++ +F ML S+ P T V+ ACA + S +GT +H YI
Sbjct: 315 SWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYI 374
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ + LD+ N L+ MY KCG L + +F+ M D+VSW++++ G+AQ G +AL
Sbjct: 375 LRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKAL 434
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF MR + RP+ +T+V +L AC+ +G + +G ++ + + + P + +VD+
Sbjct: 435 LLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFV-TKSCLGPCILIDTALVDM 493
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSA 579
++ G + A+ ++M D+V W S++A +HG + R + L I P +
Sbjct: 494 YSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVI 552
Query: 580 ALVLL 584
L +L
Sbjct: 553 YLSIL 557
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 151/352 (42%), Gaps = 51/352 (14%)
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
+P S+N II +++ + + +S M + PD T SL+ ACTS G+
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 332 IHSYIIKKGFYSNVPVCNAILQH---------------------------------QAGE 358
H +I G+ S+ + +++ +AGE
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 359 ---LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
F ++++M +P +T ++ + L+ LH +++ G DV + N
Sbjct: 130 HDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANS 186
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
++++Y KCG + A+ LF M+ DV+SW+SL+ GYAQ G E L+L RM++ G+ P+
Sbjct: 187 MLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPD 246
Query: 476 HVTLVGVLTACSH-----VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
T +++A + VG + G L ++ + I + ++ + + G V+
Sbjct: 247 QQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI------ETSLIGMYLKCGNVNS 300
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
A M D++ W ++++ + D+ +LK S A +
Sbjct: 301 AFRIFEGM-MHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATI 351
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 209/653 (32%), Positives = 342/653 (52%), Gaps = 82/653 (12%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
AF +LD+A ++ R + + L + L KQ + EA A F+ + +
Sbjct: 322 AFARHGMLDEAKDIYLGLKER-NAVTLNGLIAGLVKQQ-HGEA-AAEIFMGARDSAAVNV 378
Query: 81 STYADLISACSSL----RSLQLGRKVHDHIL-SSKCQPDAVLHNHILNMYGKCGSLEDAR 135
TY L+SA + + L+ GR+VH H+L + + N ++NMY KCG+++ A
Sbjct: 379 DTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKAC 438
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VF M R+ +SW +I QNG AA+ Y M Q+ + P F S + +C+GL
Sbjct: 439 RVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLG 498
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+QLH +K NAL+ MY + R+ + W +F+S++ D+ S
Sbjct: 499 LLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVS------ 552
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA--NEAMSLFSEMGDRELIPDGLTV 313
WN+I+ GV + S A E++ +FS M L+P+ +T
Sbjct: 553 ----------------------WNSIM-GVMASSQAPITESVQVFSNMMKSGLVPNKVTF 589
Query: 314 RSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL---FRLFS--- 364
+ L A T PLS+ + G QIHS ++K G + V NA++ ++G++ RLFS
Sbjct: 590 VNFLAALT-PLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMS 648
Query: 365 -----------------------------LMLASQTKPDHITFNDVMGACAAMASLEMGT 395
LM+ S+ DH TF+ V+ ACA++A+LE G
Sbjct: 649 GRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGM 708
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H + +++ L DV V + L+DMY KCG + A ++F+ M + SW+S+I GYA+ G
Sbjct: 709 EMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHG 768
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G +AL++F M+ SG P+HVT V VL+ACSH GLVE GL + +M+ +YGI+P E
Sbjct: 769 LGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEHY 827
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC---KTHGNVDVGKRAAENILK 572
SCV+DLL RAG + + ++++ +M + ++W+++L +C K +D+G A+ +L+
Sbjct: 828 SCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLE 887
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++P N VL +A+ G+WE+ A+ +MK V+K G+SW+ + +H
Sbjct: 888 LEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVH 940
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 242/519 (46%), Gaps = 69/519 (13%)
Query: 79 RPSTYADLISACSSLRSLQLG-----RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
RP +AD++ LR + G +H ++ D L NH++N Y K L+
Sbjct: 64 RPHPHADVL-----LRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDA 118
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS--GLMPDQFTFGSIIRAC 191
AR VFD MP RN VSWT +I+G +G A L+ ML+ G P FTFGS++RAC
Sbjct: 119 ARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRAC 178
Query: 192 --SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT--KFDRILDAWNVFSSIARKDI 247
SG +G Q+H V K+E S+ NALI+MY + A VF + +D+
Sbjct: 179 QDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDL 238
Query: 248 TSWGSMIDGFSKLDFA---RTVFNEME--------SPNLASWNTIIAG--VASCSNANEA 294
+W +++ ++K A T+F M+ P ++ ++I ++SCS
Sbjct: 239 ITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCS----- 293
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-------FYSNVPV 347
+G + D L VR L C+S LY G + S + G Y +
Sbjct: 294 ------LG----LLDQLFVRVLKSGCSS--DLYVGSALVSAFARHGMLDEAKDIYLGLKE 341
Query: 348 CNAI---------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM----G 394
NA+ ++ Q GE + + T+ ++ A A ++ E G
Sbjct: 342 RNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKG 401
Query: 395 TQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
++H ++++ G + + V NGL++MY KCG++ A +F ME D +SW+++I Q
Sbjct: 402 REVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQ 461
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G E A+ + MR + + P++ + L++C+ +GL+ G QL+ ++G+
Sbjct: 462 NGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLH-CDAVKWGLYLDTS 520
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ +V + GR+ E + N M+ D+V W S++
Sbjct: 521 VSNALVKMYGECGRMSECWEIFNSMS-AHDVVSWNSIMG 558
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 305/584 (52%), Gaps = 69/584 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL-------------- 131
L+S ++ L+ GR+V D + + + L N +++ Y K G
Sbjct: 2 LVSFYATCGDLKEGRRVFDTME----KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG 57
Query: 132 ------EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
E A +FD++ R+V+SW +MI+G NG + +Y QM+ G+ D T
Sbjct: 58 IEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATII 117
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
S++ C+ + LG+ +H+ IKS + N L+ MY+K
Sbjct: 118 SVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC---------------- 161
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
LD A VF +M N+ SW ++IAG ++ A+ L +M
Sbjct: 162 ------------GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEG 209
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL---F 360
+ D + + S+L AC SL G +H YI SN+ VCNA++ A G +
Sbjct: 210 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGAN 269
Query: 361 RLFSLM----------LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
+FS M + + KPD T ++ ACA++++LE G ++H YI++ G + D
Sbjct: 270 SVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 329
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V N L+D+YVKCG LG AR LF+ + D+VSW+ +I GY G G EA+ F MR +
Sbjct: 330 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 389
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G+ P+ V+ + +L ACSH GL+E+G + + IM+N++ I P E +C+VDLL+R G + +
Sbjct: 390 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 449
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A FI + D +W +LL C+ + ++++ ++ AE + +++P N+ VLL NIYA
Sbjct: 450 AYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 509
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH--ASGNDIS 632
+ KWEEV R+ + ++G+RK PG SWIEI+ +++ SGN+ S
Sbjct: 510 AEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSS 553
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 170/373 (45%), Gaps = 57/373 (15%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T ++ C+ +L LG+ VH + S + N +L+MY KCG L+ A VF++
Sbjct: 114 ATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEK 173
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M +RNVVSWT+MIAG +++G + AI L QM + G+ D SI+ AC+ + G
Sbjct: 174 MGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG 233
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI------ 254
+ +H ++ + S+L NAL+ MY K + A +VFS++ KDI SW +M+
Sbjct: 234 KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPD 293
Query: 255 -----------------------------DGFSK-----------------LDFARTVFN 268
+G+S L AR +F+
Sbjct: 294 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 353
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ S +L SW +IAG NEA++ F+EM D + PD ++ S+L AC+ L Q
Sbjct: 354 MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 413
Query: 329 GMQIHSYIIKKGFYSNVPV----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
G + YI+K F + C L + G L + + + PD + ++
Sbjct: 414 GWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472
Query: 385 CAAMASLEMGTQL 397
C +E+ ++
Sbjct: 473 CRIYHDIELAEKV 485
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 130/256 (50%), Gaps = 13/256 (5%)
Query: 63 ALVAFDFLQNNTNF-RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+V D + NT ++P T A ++ AC+SL +L+ G+++H +IL + D + N
Sbjct: 274 TMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 333
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++++Y KCG L AR++FD +P +++VSWT MIAG +G N AI + +M +G+ P
Sbjct: 334 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 393
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWN 237
D+ +F SI+ ACS + G + +++K++ L ++ + ++ + A+
Sbjct: 394 DEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 452
Query: 238 VFSSIA-RKDITSWGSMIDG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASCSN 290
++ D T WG+++ G + ++ A V E+E N + + A
Sbjct: 453 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 512
Query: 291 ANEAMSLFSEMGDREL 306
E + ++G + L
Sbjct: 513 WEEVKRMREKIGKKGL 528
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/649 (29%), Positives = 308/649 (47%), Gaps = 74/649 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L A ++ D +R + W ++ S + +EAL F ++ + RI P + +
Sbjct: 65 LKDARDLFDQLPQRDEVSWT-NIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGL 123
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
C + G +H + + + +L+MY K G + + VFDEMP RN V
Sbjct: 124 KTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAV 183
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+WTA+I G + G A + + M +S + D + + ++A + + GR +H
Sbjct: 184 TWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQT 243
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+K + N+L MY K KLD+ F
Sbjct: 244 LKKGFDENSFVANSLTTMYNKC----------------------------GKLDYGLHTF 275
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
+M + ++ SW TI+ + + F M +IP+ T +++ C + L
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL-------------------------- 359
G Q+H++++ GF + + V N+I L + GEL
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 360 --------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
F S M + KP+ V+ C +MA LE G QLH +++ GL
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L+ MY KCGS+ A ++F D++SW+++I GYA+ G +EA++LF ++ G
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG 515
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+RP+ VT +GVLTACSH G+V+ G + M +Y I P++E C++DLL RAGR+H+A
Sbjct: 516 LRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDA 575
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
E I M D VVW +LL +C+ HG+VD G+RAA +LK+DP + + L NI+A+
Sbjct: 576 ETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAK 635
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI---------HASGNDI 631
GKW+E A + MK +GV K PG S ++++ + H G DI
Sbjct: 636 GKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDI 684
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 225/492 (45%), Gaps = 67/492 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGL 177
N+ L + K L+DAR +FD++PQR+ VSWT +I+G + + A+ L+ +M LQS L
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
D F ++ C G LH +K + + +AL+ MY K I +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF +EM + N +W +I G+ + ++
Sbjct: 173 VF----------------------------DEMPTRNAVTWTAVITGLVRAGYSEAGLAY 204
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQ 355
FS MG ++ D L A +L G IH+ +KKGF N V N++ + ++
Sbjct: 205 FSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNK 264
Query: 356 AGEL------FR----------------------------LFSLMLASQTKPDHITFNDV 381
G+L FR F M AS P+ TF+ V
Sbjct: 265 CGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAV 324
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ CA A L+ G QLH +++ G + V N +M +Y KCG L S ++F M+ D+
Sbjct: 325 ISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDI 384
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
++WS++I Y+Q G GEEA + RMRS G +PN L VL+ C + ++E+G QL+
Sbjct: 385 ITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAH 444
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ + G+ T S ++ + A+ G + EA I ++ DDI+ W ++++ HG+
Sbjct: 445 VLS-VGLEQTSMVCSALIIMYAKCGSIAEASK-IFMDSWKDDIISWTAMISGYAEHGHSQ 502
Query: 562 VGKRAAENILKI 573
ENI K+
Sbjct: 503 EAIELFENIQKV 514
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+D+ N + + VK L AR+LF+ + D VSW+++I GY EAL+LF +M
Sbjct: 47 VDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM 106
Query: 468 R-SSGVRPNHVTLVGVLTACSHVGL-VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
R S +R + L L C +GL G L+ + G++ + S ++D+ +
Sbjct: 107 RLQSELRIDPFLLSLGLKTCG-LGLNYLYGTNLHG-FSVKXGLVNSVFVGSALLDMYMKI 164
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
G + + ++M + V W +++ G + G
Sbjct: 165 GEIGRSCKVFDEMP-TRNAVTWTAVITGLVRAGYSEAG 201
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 188/591 (31%), Positives = 313/591 (52%), Gaps = 55/591 (9%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
NT R +Y +IS L R + D + + D N +L Y + L
Sbjct: 73 NTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM----PERDLFSWNVMLTGYVRNCRLG 128
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ------SGLMPDQFTFGS 186
DAR +FD MP+++VVSW ++++G +QNG + A E++ M + +GL+ G
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGR 188
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
I AC + +S+ LIS N L+ + + ++ DA +F + +D
Sbjct: 189 IEEACL--------------LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRD 234
Query: 247 ITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
SW +MI G+++ L AR +F+E + ++ +W +++G +EA + F EM +
Sbjct: 235 AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 304 RELIPDGLTVRSLLCACTSPLS--LYQGM----------------QIHSYIIKKGFYSNV 345
+ + + + ++ L++ M QI + F+ +
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM 354
Query: 346 PVCN-----AILQ--HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
P + AI+ Q+G E +F + + TF + CA +A+LE+G
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H +K G FV N L+ MY KCGS+ A + F +E+ DVVSW++++ GYA+ G
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G +AL +F M+++GV+P+ +T+VGVL+ACSH GL++ G + + M +YG+IPT +
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C++DLL RAGR+ EA+D I M F W +LL + + HGN ++G++AAE + K++P
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 594
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
NS VLL N+YA+SG+W + ++ M++ GV+KVPG SW+E+Q KIH
Sbjct: 595 QNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHT 645
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 211/467 (45%), Gaps = 75/467 (16%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
H+ ++ + +V +N +++ Y + AR +FD+MP+R++ SW M+ G +N +
Sbjct: 70 HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGD 129
Query: 165 AIELYVQMLQSGLMP--DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A L+ LMP D ++ S++ + V R++ ++ + IS N L
Sbjct: 130 ARRLF------DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNS----ISWNGL 179
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWN 279
+A Y RI +A +F S + D+ SW ++ GF KL AR +F++M + SWN
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY--QGMQIHSYII 337
T+I+G A ++A LF E R++ T+ +S Y GM +
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDVF-----------TWTAMVSGYVQNGMLDEA--- 285
Query: 338 KKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
K F+ +P + + +++N ++ +++ +L
Sbjct: 286 -KTFFDEMP-------------------------EKNEVSYNAMIAGYVQTKKMDIAREL 319
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
++ ++ N ++ Y + G + AR+ F+ M D VSW+++I GYAQ G
Sbjct: 320 ----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRS 516
EEAL +F ++ G N T L+ C+ + +E G Q++ + ++ YG
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT-------G 428
Query: 517 CVVD--LLA---RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
C V LLA + G + EA D + + D+V W ++LA HG
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHG 474
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 169/375 (45%), Gaps = 50/375 (13%)
Query: 40 RRFDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
R FD+ D+F S + + +EA FD + +Y +I+
Sbjct: 256 RLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAMIAGYVQT 310
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+ + + R++ + S C+ + N ++ YG+ G + AR FD MPQR+ VSW A+I
Sbjct: 311 KKMDIARELFE---SMPCR-NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAII 366
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AG +Q+G A+ ++V++ Q G ++ TFG + C+ + + LG+Q+H +K +G
Sbjct: 367 AGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYG 426
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ NAL+AMY K I +A + F I KD+ SW +M+ G+++ F R
Sbjct: 427 TGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGR--------- 477
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+A+++F M + PD +T+ +L AC+ L +G +
Sbjct: 478 -------------------QALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYF 518
Query: 334 SYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAM 388
+ K Y +P C L +AG L L+ +P ++ ++GA
Sbjct: 519 YSMTKD--YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576
Query: 389 ASLEMGTQLHCYIMK 403
+ E+G + + K
Sbjct: 577 GNTELGEKAAEMVFK 591
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 170/401 (42%), Gaps = 68/401 (16%)
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMES 272
++ N I+ + + A +VF+++ R+ S+ +MI G+ SK + AR +F++M
Sbjct: 49 ILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPE 108
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
+L SWN ++ G +A LF M +++++ S SL G
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV--------------SWNSLLSGYAQ 154
Query: 333 HSYIIK-KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ Y+ + + + N+P N+I ++N ++ A +
Sbjct: 155 NGYVDEAREVFDNMPEKNSI-------------------------SWNGLLAAYVHNGRI 189
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E C + ++ D+ N LM +V+ LG AR LF+ M D +SW+++I GY
Sbjct: 190 EEA----CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
AQ G +A +LF + V T +++ G+++E + M P
Sbjct: 246 AQGGGLSQARRLFDESPTRDV----FTWTAMVSGYVQNGMLDEAKTFFDEM-------PE 294
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDD----DIVVWKSLLASCKTHGNVDVGKRAA 567
+ S + AG V + I + F+ +I W +++ G++ ++
Sbjct: 295 KNEVSYNAMI---AGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+ + + D + AA++ YA SG +EE + +K+ G
Sbjct: 352 DMMPQRDCVSWAAIIAG---YAQSGHYEEALNMFVEIKQDG 389
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEE 494
++DPD++ W+ I + + G + AL +F M R S V N + G L
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYN-AMISGYLRNSK------- 95
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLA--RAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ + +N + +P R+ S V L R R+ +A + M + D+V W SLL+
Sbjct: 96 ----FNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMP-EKDVVSWNSLLS 150
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+G VD + +N+ + NS + L Y +G+ EE L S
Sbjct: 151 GYAQNGYVDEAREVFDNMPE---KNSISWNGLLAAYVHNGRIEEACLLFES 198
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 185/569 (32%), Positives = 314/569 (55%), Gaps = 40/569 (7%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
N L+A + + + FR P +YA+LI + R+L G+K+H H++++ V+ ++
Sbjct: 8 NATLLATNGIISRHFFRSEPESYAELIDMYARDRALHAGKKLHAHLVTNGFARFNVVASN 67
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMP 179
+++ Y CG L AR +FD++P NV W A+I C++ G + A+ ++ +M GL P
Sbjct: 68 LVSFYTCCGQLSHARKLFDKIPTTNVRRWIALIGSCARCGFYDHALAVFSEMQAVQGLTP 127
Query: 180 DQ-FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
+ F S+++AC + G ++H ++K ++LI MY+K ++ DA V
Sbjct: 128 NYVFVIPSVLKACGHVGDRITGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARKV 187
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMES-------PNLASWNTIIAGVASCSNA 291
F + KD + +++ G+ + A +ES PN+ +WN++I+G + +
Sbjct: 188 FDGMTVKDTVALNAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQ 247
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
+F R +I DG V + + TS +S GF N
Sbjct: 248 GRVSEIF-----RLMIADG--VEPDVVSWTSVIS--------------GFVQNF------ 280
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
+ E F F ML+ P T + ++ ACA A + +G ++H Y + TG+ D++
Sbjct: 281 ---RNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYALVTGVEGDIY 337
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L+DMY KCG + AR LF+ M + + V+W+S+I G+A G EEA++LF +M G
Sbjct: 338 VRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQMEKEG 397
Query: 472 V-RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
V + +H+T LTACSHVG E G +L++IMQ +Y I P E +C+VDLL RAG++HE
Sbjct: 398 VAKLDHLTFTAALTACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVDLLGRAGKLHE 457
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A I M + D+ VW +LLA+C+ H +V++ + AA ++++++P ++A +LL ++YA
Sbjct: 458 AYCMIKTMPIEPDLFVWGALLAACRNHRHVELAEVAAMHLMELEPESAANPLLLSSVYAD 517
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+GKW + R+ +K+ +RK+ G SWIE
Sbjct: 518 AGKWGKFERVKKRIKKGKLRKLQGLSWIE 546
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
QN N+ AFD + + P+ T + L+ AC++ + +GR++H + L + + D
Sbjct: 278 QNFRNKE--AFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYALVTGVEGD 335
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ + +++MY KCG + +AR +F MP++N V+W ++I G + +G AIEL+ QM +
Sbjct: 336 IYVRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQMEK 395
Query: 175 SGLMP-DQFTFGSIIRACSGLCCVGLGRQL 203
G+ D TF + + ACS + LG++L
Sbjct: 396 EGVAKLDHLTFTAALTACSHVGDFELGQRL 425
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 302/580 (52%), Gaps = 64/580 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A + +A S+L GR H + D + + ++NMY K G +AR VFD M
Sbjct: 110 TFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTM 169
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+RN VSW MI+G + A+ L+ M + ++F F S++ A + V G+
Sbjct: 170 PERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGK 229
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +K+ S + NAL+ MY K + DA F + + K
Sbjct: 230 QIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDK---------------- 273
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N +W+ +I G A ++++A+ LFS M + P T ++ AC+
Sbjct: 274 ------------NSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACS 321
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPV----------CNAILQHQAG-------------- 357
+ ++G Q+H Y++K GF S + V C++I+ + G
Sbjct: 322 DLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTS 381
Query: 358 ------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ L+ M P+ +T V+ AC+++A+LE G Q+H +K G
Sbjct: 382 MIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYG 441
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L+V + + L MY KCG L +F M DV+SW+++I G +Q GCG+EAL+LF
Sbjct: 442 FGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFE 501
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M+ G +P++VT V +L+ACSH+GLVE G +R+M +E+G+ P E +C+VD+L+RA
Sbjct: 502 EMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRA 561
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ EA +F D + +W+ +L +C+ + N ++G A E ++++ S+A VLL
Sbjct: 562 GKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLS 621
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+IY++ G+WE+V R+ MK RGV K PG SWIE+++ +H
Sbjct: 622 SIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVH 661
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 153/517 (29%), Positives = 246/517 (47%), Gaps = 80/517 (15%)
Query: 94 RSLQLGRKVHDHIL--SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
RSLQ G+ +H I+ SS C + N ++N+Y KC L +A+ VF+ + ++VVSW
Sbjct: 20 RSLQKGKALHAQIIKSSSSC---VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNC 76
Query: 152 MIAGCSQNGQENAA--IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
+I G SQ+G ++ +EL+ +M P+ TF + A S L GR HA IK
Sbjct: 77 IINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIK 136
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
+ + ++L+ MY K +A VF ++ ++ SW +MI G+
Sbjct: 137 MDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGY------------ 184
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
AS A EA+ LF M E + S+L A T P + G
Sbjct: 185 ----------------ASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNG 228
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQ---------------------------------HQA 356
QIH +K G S V V NA++ Q+
Sbjct: 229 KQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQS 288
Query: 357 GE---LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
G+ +LFS M S +P TF V+ AC+ + + G Q+H Y++K G ++VM
Sbjct: 289 GDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVM 348
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
L+DMY KC S+ AR+ F+++++PD+V W+S+I GY Q G E+AL L+ RM G+
Sbjct: 349 TALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGIL 408
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGI-IPTRERRSCVVDLLARAGRVHEA 531
PN +T+ VL ACS + +E+G Q++ R ++ +G+ +P S + + A+ G + +
Sbjct: 409 PNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPI---GSALSTMYAKCGCLKDG 465
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
+M D++ W ++++ +G GK A E
Sbjct: 466 TLVFRRMP-ARDVISWNAMISGLSQNG---CGKEALE 498
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 310/620 (50%), Gaps = 78/620 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHIL 107
+ ++ + Y EAL + + +RP + + I CSS + L+ G+ +H IL
Sbjct: 29 IVAAFARNGHYREAL---GYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMIL 85
Query: 108 SSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
++ + D +L ++ MY +C LE AR FDEM ++ +V+W A+IAG S+NG A+
Sbjct: 86 ETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGAL 145
Query: 167 ELYVQMLQS---GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
++Y M+ G+ PD TF S + AC+ + + GR++ A + S + S I QNALI
Sbjct: 146 KIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALI 205
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MY+K L+ AR VF+ +++ ++ +WNT+I+
Sbjct: 206 NMYSKC----------------------------GSLESARKVFDRLKNRDVIAWNTMIS 237
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G A A +A+ LF MG + P+ +T LL ACT+ L QG IH + + G+ S
Sbjct: 238 GYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYES 297
Query: 344 NVPVCNAILQH-------------------------------------QAGELFRLFSLM 366
++ + N +L QA + +F M
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQM 357
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
P+ IT ++V+ ACA + + G +H I DV + N LM+MY +CGSL
Sbjct: 358 QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
+F + D +VSWS+LI YAQ G L+ F + G+ + VT+V L+AC
Sbjct: 418 DDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSAC 477
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SH G+++EG+Q + M ++G+ P C+VDLL+RAGR+ AE+ I+ M F D V
Sbjct: 478 SHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA 537
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVARLMGSMK 605
W SLL+ CK H + R A+ + +++ + + V LL N+YA +G+W++V + +
Sbjct: 538 WTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRK---TRN 594
Query: 606 ERGVRKVPGQSWIEIQTKIH 625
R RK PG S+IEI +H
Sbjct: 595 RRAARKNPGCSYIEINDTVH 614
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 208/469 (44%), Gaps = 68/469 (14%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C L+ A + D ++ W+ L + + + AL + + + + ++P
Sbjct: 104 YARCRDLELARKTFDEMGKKTLVTWNA-LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPD 162
Query: 82 --TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T++ + AC+ + + GR++ ++S D+++ N ++NMY KCGSLE AR VFD
Sbjct: 163 AITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFD 222
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ R+V++W MI+G ++ G A+EL+ +M + P+ TF ++ AC+ L +
Sbjct: 223 RLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQ 282
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR +H V + + S L+ N L+ MYTK S
Sbjct: 283 GRAIHRKVREDGYESDLVIGNVLLNMYTKCS---------------------------SS 315
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
L+ AR VF M + ++ +WN +I A +A+ +F +M + P+ +T+ ++L A
Sbjct: 316 LEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSA 375
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQTK----- 372
C + QG +H+ I ++V + N+++ ++ G L + A + K
Sbjct: 376 CAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSW 435
Query: 373 -----------------------------PDHITFNDVMGACAAMASLEMGTQLHCYIM- 402
D +T + AC+ L+ G Q ++
Sbjct: 436 STLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVG 495
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVG 450
GLA D ++D+ + G L +A L + M PD V+W+SL+ G
Sbjct: 496 DHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 294/581 (50%), Gaps = 68/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY + A L+S+ LG +H IL S D + N +L MY G +E AR VFD M
Sbjct: 119 TYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVM 178
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R+V+SW MI+G +NG N A+ ++ M+ G+ PD T S++ C L + +GR
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGR 238
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H V + G + +NAL+ MY K R+ +A VF + R+D+ +W MI+G+
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGY---- 294
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+E ++ NA E L G R P+ +T+ SL+ AC
Sbjct: 295 --------IEDGDV-------------ENALELCRLMQFEGVR---PNAVTIASLVSACG 330
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------- 356
L L G +H + I++ S++ + +++ A
Sbjct: 331 DALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSA 390
Query: 357 -------GELFR----LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
EL R LF M +P+ T N ++ A A +A L +HCY+ KTG
Sbjct: 391 IIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTG 450
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMED----PDVVSWSSLIVGYAQFGCGEEAL 461
+ GL+ +Y KCG+L SA ++FN +++ DVV W +LI GY G G AL
Sbjct: 451 FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNAL 510
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
++F M SGV PN +T L ACSH GLVEEGL L+ M Y + +C+VDL
Sbjct: 511 QVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDL 570
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAGR+ EA + I + F+ +W +LLA+C TH NV +G+ AA + +++P N+
Sbjct: 571 LGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNY 630
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
VLL NIYA+ G+W+++ ++ M+ G+RK PG S IEI++
Sbjct: 631 VLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIRS 671
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 112/201 (55%), Gaps = 9/201 (4%)
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD T+ V A + S+ +G +H I+++ +D +V N L+ MY+ G + AR +
Sbjct: 115 PDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNV 174
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ M++ DV+SW+++I GY + G +AL +F M + GV P+H T+V +L C H+ +
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGL 234
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E G ++++++ E + E ++ +V++ + GR+ EA +M D++ W
Sbjct: 235 EMGRNVHKLVE-EKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRME-RRDVITW----- 287
Query: 553 SCKTHGNVDVGKRAAENILKI 573
+C +G ++ G EN L++
Sbjct: 288 TCMINGYIEDGD--VENALEL 306
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 310/620 (50%), Gaps = 78/620 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHIL 107
+ ++ + Y EAL + + +RP + + I CSS + L+ G+ +H IL
Sbjct: 29 IVAAFARNGHYREAL---GYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMIL 85
Query: 108 SSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
++ + D +L ++ MY +C LE AR FDEM ++ +V+W A+IAG S+NG A+
Sbjct: 86 ETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGAL 145
Query: 167 ELYVQMLQS---GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
++Y M+ G+ PD TF S + ACS + + GR++ A + S + S I QNALI
Sbjct: 146 KIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALI 205
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MY+K L+ AR VF+ +++ ++ +WNT+I+
Sbjct: 206 NMYSKC----------------------------GSLESARKVFDRLKNRDVIAWNTMIS 237
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G A A +A+ LF MG + P+ +T LL ACT+ L QG IH + + G+ S
Sbjct: 238 GYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYES 297
Query: 344 NVPVCNAILQH-------------------------------------QAGELFRLFSLM 366
++ + N +L QA + +F M
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQM 357
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
P+ IT ++V+ ACA + + G +H I DV + N LM+MY +CGSL
Sbjct: 358 QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
+F + D +VSWS+LI YAQ G L+ F + G+ + VT+V L+AC
Sbjct: 418 DDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSAC 477
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SH G+++EG+Q + M ++G+ P C+VDLL+RAGR+ AE+ I+ M F D V
Sbjct: 478 SHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA 537
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVARLMGSMK 605
W SLL+ CK H + R A+ + +++ + + V LL N+YA +G+W++V + +
Sbjct: 538 WTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRK---TRN 594
Query: 606 ERGVRKVPGQSWIEIQTKIH 625
R RK PG S+IEI +H
Sbjct: 595 RRAARKNPGCSYIEINDTVH 614
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 206/469 (43%), Gaps = 68/469 (14%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C L+ A + D ++ W+ L + + + AL + + + + ++P
Sbjct: 104 YARCRDLELARKTFDEMGKKTLVTWNA-LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPD 162
Query: 82 --TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T++ + ACS + + GR++ ++S D+++ N ++NMY KCGSLE AR VFD
Sbjct: 163 AITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFD 222
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ R+V++W MI+G ++ G A+EL+ +M + P+ TF ++ AC+ L +
Sbjct: 223 RLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQ 282
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR +H V + + S L+ N L+ MYTK L+
Sbjct: 283 GRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEE------------------------ 318
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
AR VF + + ++ +WN +I A +A+ +F +M + P+ +T+ ++L A
Sbjct: 319 ---ARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSA 375
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQTK----- 372
C + QG +H+ I ++V + N+++ ++ G L + A + K
Sbjct: 376 CAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSW 435
Query: 373 -----------------------------PDHITFNDVMGACAAMASLEMGTQ-LHCYIM 402
D +T + AC+ L+ G Q +
Sbjct: 436 STLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVG 495
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVG 450
GLA D ++D+ + G L +A L + M PD V+W+SL+ G
Sbjct: 496 DHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 301/573 (52%), Gaps = 68/573 (11%)
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+V +N +++ Y + G E ARM+FDEMP+R++VSW MI G +N A EL+ +M +
Sbjct: 90 SVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPE 149
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQ----------------LHAHVIKSE------- 211
D ++ +I+ + CV R+ L A+V S+
Sbjct: 150 R----DVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVL 205
Query: 212 HGSH----LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFAR 264
GS L+S N L+ + K +I++A F S+ +D+ SW ++I G+++ +D AR
Sbjct: 206 FGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEAR 265
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP---------------- 308
+F+E ++ +W +++G EA LF M +R +
Sbjct: 266 QLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEM 325
Query: 309 -----DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQA 356
D + R++ T Q +I K + +P + + Q+
Sbjct: 326 AKELFDVMPCRNVSTWNTMITGYAQCGKISE---AKNLFDKMPKRDPVSWAAMIAGYSQS 382
Query: 357 G---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
G E RLF LM + + +F+ + CA + +LE+G QLH ++K G FV
Sbjct: 383 GHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 442
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L+ MY KCGS+ A +LF M D+VSW+++I GY++ G GEEAL+ F M+ G++
Sbjct: 443 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLK 502
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
P+ T+V VL+ACSH GLV++G Q + M +YG+ P + +C+VDLL RAG + EA +
Sbjct: 503 PDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHN 562
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
+ M F+ D +W +LL + + HGN ++ + AA+ I ++P NS VLL N+YASSG+
Sbjct: 563 LMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGR 622
Query: 594 WEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
W +V +L M+++GV+KVPG SWIEIQ K H
Sbjct: 623 WGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHT 655
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 120/237 (50%), Gaps = 6/237 (2%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
+ C + +A + D +R W + + + EAL F ++ R+
Sbjct: 347 GYAQCGKISEAKNLFDKMPKRDPVSWA-AMIAGYSQSGHSYEALRLFVLMEREGG-RLNR 404
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S+++ +S C+ + +L+LG+++H ++ + + N +L MY KCGS+E+A +F E
Sbjct: 405 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 464
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M +++VSW MIAG S++G A+ + M + GL PD T +++ ACS V G
Sbjct: 465 MAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 524
Query: 201 RQLHAHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
RQ + H + ++G SQ+ ++ + + + +A N+ ++ D WG+++
Sbjct: 525 RQ-YFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 170/404 (42%), Gaps = 66/404 (16%)
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEM 270
S + N I+ Y + R +A VF + R S+ +MI G+ + + AR +F+EM
Sbjct: 57 SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+L SWN +I G N +A LF M +R+ +C+ + LS
Sbjct: 117 PERDLVSWNVMIKGYVRNRNLGKARELFERMPERD-----------VCSWNTILS----- 160
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
G+ N V +A R+F M + + +++N ++ A +
Sbjct: 161 ---------GYAQNGCVDDAR---------RVFDRM----PEKNDVSWNALLSAYVQNSK 198
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
LE C + + + N L+ +VK + AR+ F+ M+ DVVSW+++I G
Sbjct: 199 LEEA----CVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITG 254
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNH--VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
YAQ G +EA +LF P H T +++ +VEE +L+ M
Sbjct: 255 YAQNGEIDEARQLFDE------SPVHDVFTWTAMVSGYIQNRMVEEARELFDRM------ 302
Query: 509 IPTRERRS--CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
P R S ++ + RV A++ + M ++ W +++ G + K
Sbjct: 303 -PERNEVSWNAMLAGYVQGERVEMAKELFDVMPC-RNVSTWNTMITGYAQCGKISEAKNL 360
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
+ + K DP + AA++ Y+ SG E RL M+ G R
Sbjct: 361 FDKMPKRDPVSWAAMIA---GYSQSGHSYEALRLFVLMEREGGR 401
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEG- 495
D D+ W+ I Y + G EAL++F+RM R S V N + G + G
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMI----------SGYLRNGE 105
Query: 496 LQLYRIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+L R++ +E +P R+ S ++ R + +A + +M + D+ W ++L+
Sbjct: 106 FELARMLFDE---MPERDLVSWNVMIKGYVRNRNLGKARELFERMP-ERDVCSWNTILSG 161
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+G VD +R + ++ N + L + Y + K EE L GS
Sbjct: 162 YAQNGCVDDARRVFD---RMPEKNDVSWNALLSAYVQNSKLEEACVLFGS 208
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 199/659 (30%), Positives = 326/659 (49%), Gaps = 77/659 (11%)
Query: 6 FFICHLPRWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALV 65
FF L C Y +D+A V + + + ++ + K + ++AL
Sbjct: 70 FFQTKLVSLFCRYGS-------VDEAARVFEPIDSKLNVLYH-TMLKGFAKVSDLDKALQ 121
Query: 66 AFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
F ++ + + P Y L+ C L++G+++H ++ S D + N
Sbjct: 122 FFVRMRYDD---VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY KC + +AR VFD MP+R++VSW ++AG SQNG A+E+ M + L P T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
S++ A S L + +G+++H + ++S S + AL+ MY K
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK--------------- 283
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
GS L+ AR +F+ M N+ SWN++I N EAM +F +M D
Sbjct: 284 ------CGS-------LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQ 355
+ P ++V L AC L +G IH ++ G NV V N+++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 356 AGELF----------------------------RLFSLMLASQTKPDHITFNDVMGACAA 387
A +F FS M + KPD T+ V+ A A
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
++ +H +M++ L +VFV L+DMY KCG++ AR +F+ M + V +W+++
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I GY G G+ AL+LF M+ ++PN VT + V++ACSH GLVE GL+ + +M+ Y
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
I + + +VDLL RAGR++EA DFI QM + V+ ++L +C+ H NV+ ++AA
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
E + +++P + VLL NIY ++ WE+V ++ SM +G+RK PG S +EI+ ++H+
Sbjct: 631 ERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHS 689
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 237/524 (45%), Gaps = 78/524 (14%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+ CSSL+ L R++ + + + +++++ + GS+++A VF+ +
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ V + M+ G ++ + A++ +V+M + P + F +++ C + +G+++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H ++KS L + L MY K ++ +A VF + +D+ SW +++ G+S+ A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
R A+ + M + L P +T+ S+L A ++
Sbjct: 218 RM----------------------------ALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR-------------- 361
+ G +IH Y ++ GF S V + A++ A +LF
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 362 --------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+F ML KP ++ + ACA + LE G +H ++ GL
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+V V+N L+ MY KC + +A +F ++ +VSW+++I+G+AQ G +AL F +M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVDLLAR 524
RS V+P+ T V V+TA + + + ++ ++ + + T + +VD+ A+
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT----TALVDMYAK 485
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
G + A + M+ + + W +++ THG GK A E
Sbjct: 486 CGAIMIARLIFDMMS-ERHVTTWNAMIDGYGTHG---FGKAALE 525
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/591 (31%), Positives = 313/591 (52%), Gaps = 55/591 (9%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
NT R +Y +IS L R + D + + D N +L Y + L
Sbjct: 73 NTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM----PERDLFSWNVMLTGYVRNCRLG 128
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ------SGLMPDQFTFGS 186
DAR +FD MP+++VVSW ++++G +QNG + A E++ M + +GL+ G
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGR 188
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
I AC + +S+ LIS N L+ + + ++ DA +F + +D
Sbjct: 189 IEEACL--------------LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRD 234
Query: 247 ITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
SW +MI G+++ L AR +F+E + ++ +W +++G +EA + F EM +
Sbjct: 235 AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 304 RELIPDGLTVRSLLCACTSPLS--LYQGM----------------QIHSYIIKKGFYSNV 345
+ + + + ++ L++ M QI + F+ +
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM 354
Query: 346 PVCN-----AILQ--HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
P + AI+ Q+G E +F + + TF + CA +A+LE+G
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H +K G FV N L+ MY KCGS+ A + F +E+ DVVSW++++ GYA+ G
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G +AL +F M+++GV+P+ +T+VGVL+ACSH GL++ G + + M +YG+IPT +
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C++DLL RAGR+ EA+D I M F W +LL + + HGN ++G++AAE + K++P
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 594
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
NS VLL N+YA+SG+W + ++ M++ GV+KVPG SW+E+Q KIH
Sbjct: 595 QNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHT 645
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 211/467 (45%), Gaps = 75/467 (16%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
H+ ++ + +V +N +++ Y + AR +FD+MP+R++ SW M+ G +N +
Sbjct: 70 HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGD 129
Query: 165 AIELYVQMLQSGLMP--DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A L+ LMP D ++ S++ + V R++ ++ + IS N L
Sbjct: 130 ARRLF------DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNS----ISWNGL 179
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWN 279
+A Y RI +A +F S + D+ SW ++ GF KL AR +F++M + SWN
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY--QGMQIHSYII 337
T+I+G A ++A LF E R++ T+ +S Y GM +
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDVF-----------TWTAMVSGYVQNGMLDEA--- 285
Query: 338 KKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
K F+ +P + + +++N ++ +++ +L
Sbjct: 286 -KTFFDEMP-------------------------EKNEVSYNAMIAGYVQTKKMDIAREL 319
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
++ ++ N ++ Y + G + AR+ F+ M D VSW+++I GYAQ G
Sbjct: 320 ----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRS 516
EEAL +F ++ G N T L+ C+ + +E G Q++ + ++ YG
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT-------G 428
Query: 517 CVVD--LLA---RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
C V LLA + G + EA D + + D+V W ++LA HG
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHG 474
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 50/368 (13%)
Query: 40 RRFDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
R FD+ D+F S + + +EA FD + +Y +I+
Sbjct: 256 RLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAMIAGYVQT 310
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+ + + R++ + S C+ + N ++ YG+ G + AR FD MPQR+ VSW A+I
Sbjct: 311 KKMDIARELFE---SMPCR-NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAII 366
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AG +Q+G A+ ++V++ Q G ++ TFG + C+ + + LG+Q+H +K +G
Sbjct: 367 AGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYG 426
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ NAL+AMY K I +A + F I KD+ SW +M+ G+++ F R
Sbjct: 427 TGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGR--------- 477
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+A+++F M + PD +T+ +L AC+ L +G +
Sbjct: 478 -------------------QALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYF 518
Query: 334 SYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAM 388
+ K Y +P C L +AG L L+ +P ++ ++GA
Sbjct: 519 YSMTKD--YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576
Query: 389 ASLEMGTQ 396
+ E+G +
Sbjct: 577 GNTELGEK 584
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 170/401 (42%), Gaps = 68/401 (16%)
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMES 272
++ N I+ + + A +VF+++ R+ S+ +MI G+ SK + AR +F++M
Sbjct: 49 ILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPE 108
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
+L SWN ++ G +A LF M +++++ S SL G
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV--------------SWNSLLSGYAQ 154
Query: 333 HSYIIK-KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ Y+ + + + N+P N+I ++N ++ A +
Sbjct: 155 NGYVDEAREVFDNMPEKNSI-------------------------SWNGLLAAYVHNGRI 189
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E C + ++ D+ N LM +V+ LG AR LF+ M D +SW+++I GY
Sbjct: 190 EEA----CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
AQ G +A +LF + V T +++ G+++E + M P
Sbjct: 246 AQGGGLSQARRLFDESPTRDV----FTWTAMVSGYVQNGMLDEAKTFFDEM-------PE 294
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDD----DIVVWKSLLASCKTHGNVDVGKRAA 567
+ S + AG V + I + F+ +I W +++ G++ ++
Sbjct: 295 KNEVSYNAMI---AGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+ + + D + AA++ YA SG +EE + +K+ G
Sbjct: 352 DMMPQRDCVSWAAIIAG---YAQSGHYEEALNMFVEIKQDG 389
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 38/139 (27%)
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+ GL++ G + + M EY + PT + +C++DLL R R+ E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL + + HGN ++G++AA+ K+ P NS + M++
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSG---------------------ISKMRDV 857
Query: 608 GVRKVPGQSWIEIQTKIHA 626
GV+KVPG SW E+Q KIH
Sbjct: 858 GVQKVPGYSWFEVQNKIHT 876
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEE 494
++DPD++ W+ I + + G + AL +F M R S V N + G L
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYN-AMISGYLRNSK------- 95
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLA--RAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ + +N + +P R+ S V L R R+ +A + M + D+V W SLL+
Sbjct: 96 ----FNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMP-EKDVVSWNSLLS 150
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+G VD + +N+ + NS + L Y +G+ EE L S
Sbjct: 151 GYAQNGYVDEAREVFDNMPE---KNSISWNGLLAAYVHNGRIEEACLLFES 198
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 315/615 (51%), Gaps = 67/615 (10%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHD 104
+W+ + S K Y E++ F +Q T++ ++ ++L + +++H
Sbjct: 520 LWNL-MMSEYAKIGDYRESIYLFKKMQK-LGITGNSYTFSCILKCFATLGRVGECKRIHG 577
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ + N ++ Y K G ++ A +FDE+ R+VVSW +MI+GC NG ++
Sbjct: 578 CVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHS 637
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A+E +VQML + D T + + AC+ + + LGR LH +K+ ++ N L+
Sbjct: 638 ALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLD 697
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY+K + DA F + +K + S W ++IA
Sbjct: 698 MYSKCGNLNDAIQAFEKMGQKTVVS----------------------------WTSLIAA 729
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
++A+ LF EM + + PD ++ S+L AC SL +G +H+YI K
Sbjct: 730 YVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALC 789
Query: 345 VPVCNAILQHQA------------------------------------GELFRLFSLMLA 368
+PV NA++ A E +LF+ M
Sbjct: 790 LPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-Q 848
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+++PD IT ++ AC ++A+LE+G +H I++ G + ++ V N L+DMYVKCGSL
Sbjct: 849 KESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVH 908
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
AR LF+ + + D+++W+ +I G G G EA+ F++MR +G++P+ +T +L ACSH
Sbjct: 909 ARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSH 968
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GL+ EG + M +E + P E +C+VDLLAR G + +A + I M D +W
Sbjct: 969 SGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWG 1028
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL C+ H +V++ ++ AE++ +++P N+ VLL NIYA + KWEEV +L + +RG
Sbjct: 1029 ALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRG 1088
Query: 609 VRKVPGQSWIEIQTK 623
++K PG SWIE+Q K
Sbjct: 1089 LKKSPGCSWIEVQGK 1103
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 355 QAGELFRLFSLMLASQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
+ G+L L+ SQ ++ D ++ ++ CA L+ G +H I G+ ++ +
Sbjct: 430 EVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLG 489
Query: 414 NGLMDMYVKCGSLGSARELFN-FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
L+ MYV CG+L R +F+ + D V W+ ++ YA+ G E++ LF++M+ G+
Sbjct: 490 AKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGI 549
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQL----YRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
N T +L + +G V E ++ Y++ Y + ++ ++G V
Sbjct: 550 TGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNS-----LIATYFKSGEV 604
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A +++ D D+V W S+++ C +G
Sbjct: 605 DSAHKLFDELG-DRDVVSWNSMISGCVMNG 633
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 200/647 (30%), Positives = 326/647 (50%), Gaps = 78/647 (12%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + + LD A V + R W+ L S C + +AL + FR+
Sbjct: 164 DMYSRFVDLDNARYVFEEMSNRDSVSWN-SLISGYCSNGFWEDALDMYH------KFRMT 216
Query: 80 ---PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
P T + ++ AC SL +++ G VH I D ++ N +L+MY K L +A
Sbjct: 217 GMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREA 276
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R VF +M ++ V+W MI G +Q G+ A+++L++ M+ G +PD + S IRAC
Sbjct: 277 RRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQS 335
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ +G+ +H ++I S ++ N LI MY K +L A VF + KD +
Sbjct: 336 GDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT----- 390
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
WN++I G E + F +M E PD +T
Sbjct: 391 -----------------------WNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFV 426
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLAS 369
LL + + QG IH +IK GF + + + N++L A +L ++FS M A
Sbjct: 427 LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH 486
Query: 370 QT-------------------------------KPDHITFNDVMGACAAMASLEMGTQLH 398
PD T ++ C+ +A G ++H
Sbjct: 487 DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIH 546
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
YI K+G +V + N L++MY KCGSL + ++F +M++ DVV+W++LI + +G G+
Sbjct: 547 GYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGK 606
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+ALK F+ M SGV P+ V + + ACSH G+V+EGL+ + M+ +Y + P E +CV
Sbjct: 607 KALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACV 666
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VDLLAR+G + +AE+FI M D +W +LL++C+ GN ++ +R ++ IL+++ ++
Sbjct: 667 VDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDT 726
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ NIYA+ GKW++V + SMK +G++K PG SWIEIQ +++
Sbjct: 727 GYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVY 773
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/602 (24%), Positives = 281/602 (46%), Gaps = 79/602 (13%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKV 102
+W+ + +L L+ +AL + ++ +++P T+ +I++C+ + L+LG V
Sbjct: 88 LWN-SIIRALTHNGLFTQALGYYTEMREK---KLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H+H + + D + N +++MY + L++AR VF+EM R+ VSW ++I+G NG
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+++Y + +G++PD FT S++ AC L V G +H + K +I N L
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
++MY KF+R+ +A VFS +A KD +W NT+I
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTW----------------------------NTMI 295
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
G A ++ LF +M D +PD L++ S + AC L G +H Y+I GF
Sbjct: 296 CGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFE 354
Query: 343 SNVPVCNAILQHQA--GELF---RLFSL------------------------------ML 367
+ CN ++ A G+L +F M+
Sbjct: 355 CDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM 414
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ KPD +TF ++ + +A + G +HC ++K G ++ + N L+D+Y KCG +
Sbjct: 415 KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMD 474
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F++M D++SW+++I F ++ MR+ G+ P+ T++G+L CS
Sbjct: 475 DLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCS 534
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+ + +G +++ + G + ++++ ++ G + M + D+V W
Sbjct: 535 LLAVRRQGKEIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTW 592
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPT----NSAALVLLCNIYASSGKWEEVARLMGS 603
+L+++ +G GK+A + ++ + +S A + + SG +E R
Sbjct: 593 TALISAFGMYGE---GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDR 649
Query: 604 MK 605
MK
Sbjct: 650 MK 651
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/596 (24%), Positives = 268/596 (44%), Gaps = 80/596 (13%)
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
NNT + + L+ SS ++ R VH I++S + +++ Y +
Sbjct: 11 NNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDP 70
Query: 132 EDARMVFDEM-PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
+ VF + P NV W ++I + NG A+ Y +M + L PD FTF S+I +
Sbjct: 71 ISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINS 130
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ + + LG +H H ++ S L NALI MY++F + +A VF ++ +D SW
Sbjct: 131 CARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSW 190
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA--NEAMSLFSEMGDRELIP 308
S+I G+ CSN +A+ ++ + ++P
Sbjct: 191 NSLISGY------------------------------CSNGFWEDALDMYHKFRMTGMVP 220
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLF 363
D T+ S+L AC S +++ +G+ +H I K G +V + N +L + E R+F
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280
Query: 364 SLMLASQT------------------------------KPDHITFNDVMGACAAMASLEM 393
S M + PD ++ + AC L++
Sbjct: 281 SKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQV 340
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G +H Y++ +G D N L+DMY KCG L +A+E+F+ + D V+W+SLI GY Q
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ 400
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G +E L+ F+ M+ +P+ VT V +L+ S + + +G ++ + ++G
Sbjct: 401 SGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVI-KFGFEAELI 458
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI--- 570
+ ++D+ A+ G + + + M+ DI+ W +++AS + VG + +
Sbjct: 459 IGNSLLDVYAKCGEMDDLLKVFSYMS-AHDIISWNTVIASSVHFDDCTVGFQMINEMRTE 517
Query: 571 -LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR-KVP-GQSWIEIQTK 623
L D ++ +C++ A + +E+ G + + G VP G + IE+ +K
Sbjct: 518 GLMPDEATVLGILPMCSLLAVRRQGKEIH---GYIFKSGFESNVPIGNALIEMYSK 570
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 146/314 (46%), Gaps = 34/314 (10%)
Query: 288 CSNANEA---------MSLFSEMGDRELIPDGLTVRSLLCACTSPLS-LYQGMQIHSYII 337
CSN N SL + + P TV SL+ LS ++ G I Y
Sbjct: 7 CSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQ 66
Query: 338 KKGFYSNVPVCNAI---------------LQHQA--GELFRLFSLMLASQTKPDHITFND 380
K S+V V +I L H + ++ M + +PD TF
Sbjct: 67 VKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPS 126
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V+ +CA + LE+G +H + M+ G D+++ N L+DMY + L +AR +F M + D
Sbjct: 127 VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
VSW+SLI GY G E+AL ++ + R +G+ P+ T+ VL AC + V+EG+ ++
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+++ + GI + ++ + + R+ EA ++MA D V W +++ G
Sbjct: 247 VIE-KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDS-VTWNTMIC-----GYA 299
Query: 561 DVGKRAAENILKID 574
+G+ A L +D
Sbjct: 300 QLGRHEASVKLFMD 313
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 290/573 (50%), Gaps = 66/573 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y + C + G +H L HNH+LN Y KCG L +FDEMP
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGR 201
+RNVVSW+A+IAG Q+G+ N A+ L+ +M G +MP++FT S + ACS +
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q++A +++ +GS++ NA + + +++L+A VF S KD SW +M+ G+ +L
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+ E P + M + PD T S+L
Sbjct: 398 Y-------FELPKF----------------------WRRMNLESVKPDNFTFASILTGLA 428
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNA-----ILQHQAGELFRLFSLMLASQT----- 371
+ G+Q+H ++K G+ +++ V N+ + + + F+ F M +S
Sbjct: 429 ALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQ 488
Query: 372 --------------------------KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ + T + +CA +AS+E G + H +K G
Sbjct: 489 MAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLG 548
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+DV V N L+DMY KCG + SA +F M++ VVSW+++I+G+A G +EAL++F
Sbjct: 549 TDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFD 608
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
MR PNH+T + VL ACS G ++E + + M ++GI P+ + C+V+LL RA
Sbjct: 609 EMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRA 668
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G + EAED I QM F +VW++LL +C HG+++ GKRAAE+ L +D + + +LL
Sbjct: 669 GCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLS 728
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N++A W+ V L M+ R V+KVPG SW+
Sbjct: 729 NMFAGGDNWDSVGILRELMETRDVKKVPGSSWM 761
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 141/328 (42%), Gaps = 41/328 (12%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P T+A +++ ++L +LG +VH ++ S D + N + +MY K L D
Sbjct: 413 VKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGF 472
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
FDEM +V SWT M AGC Q G+ A+++ +M G+ ++FT + + +C+ L
Sbjct: 473 KAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLA 532
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G++ H IK + NAL+ MY K + A VF S+ + + SW +MI
Sbjct: 533 SIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIM 592
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
GF A EA+ +F EM E P+ +T
Sbjct: 593 GF----------------------------AHNGQTKEALQIFDEMRKGEAEPNHITFIC 624
Query: 316 LLCACT------SPLSLYQGMQI-HSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLA 368
+L AC+ + M H + Y VC L +AG + L+L
Sbjct: 625 VLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHY----VCMVNLLGRAGCIKEAEDLILQ 680
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQ 396
+P + + ++GAC +E G +
Sbjct: 681 MPFQPGSLVWQTLLGACLVHGDIETGKR 708
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 69/120 (57%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N R+ T A +++C++L S++ G+K H + D + N +L+MY KCG +
Sbjct: 511 NVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMT 570
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
A +VF M +R+VVSWT MI G + NGQ A++++ +M + P+ TF ++ ACS
Sbjct: 571 SANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACS 630
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 304/593 (51%), Gaps = 80/593 (13%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L ++TNFR P S +SLR +Q + L+ L ++ Y G
Sbjct: 9 LLSSTNFRPIP------FSVQNSLRCIQNDTPFNPKDLTG-------LTTDLIKSYFDKG 55
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
S E+A +FDEMP R+V++WT+MI G + + A ++ ML+ G+ P+ FT ++++
Sbjct: 56 SFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLK 115
Query: 190 ACSGLCCVGLGRQLHAHVIK-SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
AC L + G+ +H IK GS + NAL+ MY T
Sbjct: 116 ACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYA--------------------T 155
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDREL 306
SM D AR VF ++ + N SW T+I G +A + +F +M + EL
Sbjct: 156 CCDSM-------DNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGEL 208
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGE 358
P ++ + AC S S G Q+H+ +I GF SN+PV NAIL +A +
Sbjct: 209 SPFSFSIA--VSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQ 266
Query: 359 LFR---------------------------LFSLMLASQTKPDHITFNDVMGACAAMASL 391
LF +FS M++ P+ TF V+ ACA +A L
Sbjct: 267 LFGEMTQKDTITWNTLIAGFETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAIL 326
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G QLH I+ GL ++ + N L+DMY KCG++ + ++F+ M ++VSW+S+++GY
Sbjct: 327 YCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGY 386
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G G+EA+ LF M SG++P+ + + VL+ACSH GLV+EGL+ +R+M + Y + P
Sbjct: 387 GAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPD 446
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
R+ +CVVDLL+RAGRV EA + I M F D +W +LL +CK + + K AA +L
Sbjct: 447 RDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVL 506
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
++ P + VLL N A+ G W + A L M+ +K G+SWIE++ ++
Sbjct: 507 EMKPNKAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQV 559
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 290/573 (50%), Gaps = 66/573 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y + C + G +H L HNH+LN Y KCG L +FDEMP
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGR 201
+RNVVSW+A+IAG Q+G+ N A+ L+ +M G +MP++FT S + ACS +
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q++A +++ +GS++ NA + + +++L+A VF S KD SW +M+ G+ +L
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+ E P + M + PD T S+L
Sbjct: 398 Y-------FELPKF----------------------WRRMNLESVKPDNFTFASILTGLA 428
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNA-----ILQHQAGELFRLFSLMLASQT----- 371
+ G+Q+H ++K G+ +++ V N+ + + + F+ F M +S
Sbjct: 429 ALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQ 488
Query: 372 --------------------------KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ + T + +CA +AS+E G + H +K G
Sbjct: 489 MAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLG 548
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+DV V N L+DMY KCG + SA +F M++ VVSW+++I+G+A G +EAL++F
Sbjct: 549 TDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFD 608
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
MR PNH+T + VL ACS G ++E + + M ++GI P+ + C+V+LL RA
Sbjct: 609 EMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRA 668
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G + EAED I QM F +VW++LL +C HG+++ GKRAAE+ L +D + + +LL
Sbjct: 669 GCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLS 728
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N++A W+ V L M+ R V+KVPG SW+
Sbjct: 729 NMFAGGDNWDSVGILRELMETRDVKKVPGSSWM 761
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 141/328 (42%), Gaps = 41/328 (12%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P T+A +++ ++L +LG +VH ++ S D + N + +MY K L D
Sbjct: 413 VKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGF 472
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
FDEM +V SWT M AGC Q G+ A+E+ +M G+ ++FT + + +C+ L
Sbjct: 473 KAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLA 532
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G++ H IK + NAL+ MY K + A VF S+ + + SW +MI
Sbjct: 533 SIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIM 592
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
GF A EA+ +F EM E P+ +T
Sbjct: 593 GF----------------------------AHNGQTKEALQIFDEMRKGEAEPNHITFIC 624
Query: 316 LLCACT------SPLSLYQGMQI-HSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLA 368
+L AC+ + M H + Y VC L +AG + L+L
Sbjct: 625 VLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHY----VCMVNLLGRAGCIKEAEDLILQ 680
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQ 396
+P + + ++GAC +E G +
Sbjct: 681 MPFQPGSLVWQTLLGACLVHGDIETGKR 708
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 69/120 (57%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N R+ T A +++C++L S++ G+K H + D + N +L+MY KCG +
Sbjct: 511 NVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMT 570
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
A +VF M +R+VVSWT MI G + NGQ A++++ +M + P+ TF ++ ACS
Sbjct: 571 SANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACS 630
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 302/525 (57%), Gaps = 25/525 (4%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++ Y G + +AR VFD MP+RNVVSWTAM+ G + G + A L+ QM + ++
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV 223
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHA-HVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
G +++ GR A + ++++ +I Y + R+++A
Sbjct: 224 SWTVMLGGLLQE---------GRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARM 274
Query: 238 VFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
+F + R+++ SW +MI G+ ++D AR +F M N SW ++ G +C +EA
Sbjct: 275 LFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEA 334
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK--GFYSNVPVCNAIL 352
LF+ M + ++ +++ + + Q+ + +K G +S + +
Sbjct: 335 SELFNAMPIKSVV----ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMI---KVY 387
Query: 353 QHQAGEL--FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
+ + EL LF +M +P+ + V+ CA +A+L+ G ++H ++++ LDV
Sbjct: 388 ERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDV 447
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+V + L+ MY+KCG+L A+++F+ DVV W+S+I GYAQ G G EAL++F M S
Sbjct: 448 YVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFS 507
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G+ P+ VT VGVL+ACS+ G V++GL+++ M+ +Y + E +C+VDLL RAG+++E
Sbjct: 508 GIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNE 567
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A D I +M + D ++W +LL +C+TH +D+ + AA+ +L ++P N+ +LL NIYAS
Sbjct: 568 AMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYAS 627
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGNDISGN 634
G+W++VA L +M++R V K PG SWI ++ K+H +G D SG+
Sbjct: 628 QGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGH 672
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 165/379 (43%), Gaps = 82/379 (21%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+ D V +++ Y + G L +ARM+FDEMP+RNVVSWT MI G QN Q + A +L+
Sbjct: 250 EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF-- 307
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
+MP++ + +S A++ YT R
Sbjct: 308 ----EVMPEK---------------------------------NEVSWTAMLKGYTNCGR 330
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASC 288
+ +A +F+++ K + + +MI F + + AR VF++M + +W+ +I
Sbjct: 331 LDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERK 390
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
+A+ LF M + P+ ++ S+L C +L G +IH+ +++ F +V V
Sbjct: 391 GLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVA 450
Query: 349 NAIL-----------------------------------QHQAG-ELFRLFSLMLASQTK 372
+ +L QH G E R+F M S
Sbjct: 451 SVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIM 510
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG--LMDMYVKCGSLGSAR 430
PD +TF V+ AC+ +++ G ++ M+T ++ + + ++D+ + G L A
Sbjct: 511 PDDVTFVGVLSACSYTGNVKKGLEIFNS-METKYQVEQKIEHYACMVDLLGRAGKLNEAM 569
Query: 431 ELFNFME-DPDVVSWSSLI 448
+L M + D + W +L+
Sbjct: 570 DLIEKMPMEADAIIWGALL 588
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 133/287 (46%), Gaps = 14/287 (4%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLI 87
+A +V D + + W + ++ L +AL F +Q IRP+ + ++
Sbjct: 364 KARQVFDQMREKDEGTWS-AMIKVYERKGLELDALELFRMMQREG---IRPNFPSLISVL 419
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S C+ L +L GR++H ++ S+ D + + +L+MY KCG+L A+ VFD ++VV
Sbjct: 420 SVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV 479
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
W ++I G +Q+G A+ ++ M SG+MPD TF ++ ACS V G ++ +
Sbjct: 480 MWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSM 539
Query: 208 IKSEHGSHLISQNA-LIAMYTKFDRILDAWNVFSSIARK-DITSWGSMIDG---FSKLDF 262
I A ++ + + ++ +A ++ + + D WG+++ KLD
Sbjct: 540 ETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDL 599
Query: 263 ARTVFNE---MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
A + +E N + + AS ++ L M DR +
Sbjct: 600 AEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRV 646
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L+ Y + G + AR +F+ M D +++SW+S++ GY Q +EA +F +M
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER--- 158
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
N ++ G+++ + G++ E +++ M + T R V + G + EAE
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYV-----KEGMISEAET 212
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
QM + ++V W +L G +D R + + + D ++ Y G+
Sbjct: 213 LFWQMP-EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMI---GGYCQVGR 268
Query: 594 WEEVARLMGSMKERGV 609
E L M R V
Sbjct: 269 LVEARMLFDEMPRRNV 284
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 95/228 (41%), Gaps = 36/228 (15%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++ N ++ Y + A+ +F+ M + + +SW+ L+ GY G EA ++F RM
Sbjct: 128 NIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMP 187
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE----------------------- 505
V V+ ++ G++ E L+ M +
Sbjct: 188 ERNV----VSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACR 243
Query: 506 -YGIIPTRE--RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ ++P ++ R+ ++ + GR+ EA ++M ++V W +++ + VD+
Sbjct: 244 LFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMP-RRNVVSWTTMITGYVQNQQVDI 302
Query: 563 GKRAAENILKIDP-TNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
++ + ++ P N + + Y + G+ +E + L +M + V
Sbjct: 303 ARK----LFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSV 346
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 299/587 (50%), Gaps = 66/587 (11%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
I+P+ T+A ++S C+S L LG ++H + + D+ + N +L MY KC L+ A
Sbjct: 154 EIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAA 213
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R +FD +PQ ++VSW +I+G QNG A L+ M+ +G+ PD TF S + + L
Sbjct: 214 RKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNEL 273
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ +++H ++I+ + ++ALI +Y K + +A+K++
Sbjct: 274 LSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDV--------EMAQKNLC------ 319
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+ S + T+I+G EA+ F + + P +T
Sbjct: 320 --------------QSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFS 365
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------ 356
S+ A +L G ++H IIK V +AIL A
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK 425
Query: 357 ------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
GE LF M T+ D ++ + + ACA + +L G ++H
Sbjct: 426 DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIH 485
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
++K L D++ + L+DMY KCG+L +R +F+ M++ + VSW+S+I Y G +
Sbjct: 486 GLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLK 545
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
E L LF M +G++P+HVT +G+++AC H G V+EG++ Y +M EYGI E +CV
Sbjct: 546 ECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACV 605
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
D+ RAGR+HEA + IN M F D VW +LL +C HGNV++ + A++++ +DP NS
Sbjct: 606 ADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNS 665
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N+ A +GKW +V ++ MKERGVRKVPG SWIE+ H
Sbjct: 666 GYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATH 712
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 239/518 (46%), Gaps = 72/518 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ AC L+S+++G+ VH+ + + D + + ++ +Y + G L DA+ +FD +
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
PQ++ V W M+ G +NG AI+++++M S + P+ TF ++ C+ + LG
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH + N L+AMY+K + A +F ++ + D+ S
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVS------------ 227
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
WN II+G EA LF M + PD +T S L
Sbjct: 228 ----------------WNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVN 271
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNV-------------------------------PVCNA 350
LSL +IH YII+ +V VC
Sbjct: 272 ELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTT 331
Query: 351 -----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L + E F ++ + KP +TF+ + A A +A+L +G +LH I+KT
Sbjct: 332 MISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK 391
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L V + ++DMY KCG L A +FN + + D + W+S+I +Q G EA+ LFR
Sbjct: 392 LDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFR 451
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE---RRSCVVDLL 522
+M G R + V++ G L+AC+++ + G +++ +M P R S ++D+
Sbjct: 452 QMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG----PLRSDLYAESSLIDMY 507
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
A+ G ++ + ++M + + V W S++++ HG++
Sbjct: 508 AKCGNLNFSRRVFDRMQ-EKNEVSWNSIISAYGNHGDL 544
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 213/476 (44%), Gaps = 76/476 (15%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY + GSL+DA+ +F + +W MI G + GQ N A+ Y++ML +G+ PD++T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F +++AC GL V +G+ +H V + ++LI +Y + + DA +F +I
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+KD W M++G+ K ++ A+ +F EM
Sbjct: 121 QKDSVLWNVMLNGYVK----------------------------NGDSGNAIKIFLEMRH 152
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------- 356
E+ P+ +T +L C S L G Q+H + G + PV N +L +
Sbjct: 153 SEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQA 212
Query: 357 -----------------------------GELFRLFSLMLASQTKPDHITFNDVMGACAA 387
GE LF M+++ KPD ITF +
Sbjct: 213 ARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNE 272
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ SL+ ++H YI++ + LDVF+ + L+D+Y KC + A++ D V +++
Sbjct: 273 LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTM 332
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I GY G +EAL+ FR + ++P VT + A + + + G +L+
Sbjct: 333 ISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHG------S 386
Query: 508 IIPTRERRSC-----VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
II T+ C ++D+ A+ GR+ A N++ + D + W S++ SC +G
Sbjct: 387 IIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRIT-EKDAICWNSMITSCSQNG 441
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/613 (32%), Positives = 317/613 (51%), Gaps = 78/613 (12%)
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
S+ SL R+ H HIL + D L +L+ Y DA +V D +P+ NV S++
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
+I S+ Q + A+ + QML GLMPD S ++AC+GL + RQ+H S
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVF 267
S Q++L+ MY K ++I DA VF + D+ SW +++ +++ +D A+ +F
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 268 NEME----SPNLASWNTIIAGVASCSNANEAMSLFSEM-------------------GDR 304
+EM PNL SWN +IAG +EA+ +F +M GD
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263
Query: 305 E-----------LIPDGLT----VRSLL------CACTSPLS------------------ 325
E +I GL V S L C+CTS +S
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFI 323
Query: 326 --LYQGMQIHS------YIIKKGFYSNVPVCNAILQ--HQAG---ELFRLFSLMLASQTK 372
L + Q+ S + +G NV +++ Q G E LF M + K
Sbjct: 324 FGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVK 383
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ +T ++ AC +A+L G HC+ ++ G++ DV+V + L+DMY KCG + ++R
Sbjct: 384 PNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRIC 443
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ + ++V W+++I GYA G +EA+++F M+ SG +P+ ++ VL+ACS GL
Sbjct: 444 FDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLT 503
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
EEG + M ++YGI E +C+V LL+RAG++ +A I +M + D VW +LL+
Sbjct: 504 EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
SC+ H NV +G+ AAE + +++P+N +LL NIYAS G W EV R+ MK +G+RK
Sbjct: 564 SCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 613 PGQSWIEIQTKIH 625
PG SWIE++ K+H
Sbjct: 624 PGCSWIEVKNKVH 636
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL---------------- 359
L C ++ SL Q Q H++I+K G +++ + +L H A +
Sbjct: 19 LNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPN 78
Query: 360 --------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
FS ML PD+ + ACA +++L+ Q+H
Sbjct: 79 VFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHG 138
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+G D FV + L+ MY+KC + A +F+ M +PDVVSWS+L+ YA+ GC +E
Sbjct: 139 IASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDE 198
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
A +LF M SGV+PN ++ G++ +H GL E + ++ M
Sbjct: 199 AKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMH 242
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 79/141 (56%), Gaps = 6/141 (4%)
Query: 55 CKQNLYN-EALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKC 111
C QN + EAL F +Q ++P+ T L+ AC ++ +L G+ H L
Sbjct: 361 CSQNGRDMEALELFREMQIAG---VKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
D + + +++MY KCG ++ +R+ FD +P +N+V W A+IAG + +G+ A+E++
Sbjct: 418 STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477
Query: 172 MLQSGLMPDQFTFGSIIRACS 192
M +SG PD +F ++ ACS
Sbjct: 478 MQRSGQKPDIISFTCVLSACS 498
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 200/647 (30%), Positives = 326/647 (50%), Gaps = 78/647 (12%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + + LD A V + R W+ L S C + +AL + FR+
Sbjct: 164 DMYSRFVDLDNARYVFEEMSNRDSVSWN-SLISGYCSNGFWEDALDMYH------KFRMT 216
Query: 80 ---PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
P T + ++ AC SL +++ G VH I D ++ N +L+MY K L +A
Sbjct: 217 GMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREA 276
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R VF +M ++ V+W MI G +Q G+ A+++L++ M+ G +PD + S IRAC
Sbjct: 277 RRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQS 335
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ +G+ +H ++I S ++ N LI MY K +L A VF + KD +
Sbjct: 336 GDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT----- 390
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
WN++I G E + F +M E PD +T
Sbjct: 391 -----------------------WNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFV 426
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLAS 369
LL + + QG IH +IK GF + + + N++L A +L ++FS M A
Sbjct: 427 LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH 486
Query: 370 QT-------------------------------KPDHITFNDVMGACAAMASLEMGTQLH 398
PD T ++ C+ +A G ++H
Sbjct: 487 DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIH 546
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
YI K+G +V + N L++MY KCGSL + ++F +M++ DVV+W++LI + +G G+
Sbjct: 547 GYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGK 606
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+ALK F+ M SGV P+ V + + ACSH G+V+EGL+ + M+ +Y + P E +CV
Sbjct: 607 KALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACV 666
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VDLLAR+G + +AE+FI M D +W +LL++C+ GN ++ +R ++ IL+++ ++
Sbjct: 667 VDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDT 726
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ NIYA+ GKW++V + SMK +G++K PG SWIEIQ +++
Sbjct: 727 GYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVY 773
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/602 (24%), Positives = 281/602 (46%), Gaps = 79/602 (13%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKV 102
+W+ + +L L+ +AL + ++ +++P T+ +I++C+ + L+LG V
Sbjct: 88 LWN-SIIRALTHNGLFTQALGYYTEMREK---KLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H+H + + D + N +++MY + L++AR VF+EM R+ VSW ++I+G NG
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+++Y + +G++PD FT S++ AC L V G +H + K +I N L
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
++MY KF+R+ +A VFS +A KD +W NT+I
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTW----------------------------NTMI 295
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
G A ++ LF +M D +PD L++ S + AC L G +H Y+I GF
Sbjct: 296 CGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFE 354
Query: 343 SNVPVCNAILQHQA--GELF---RLFSL------------------------------ML 367
+ CN ++ A G+L +F M+
Sbjct: 355 CDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM 414
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ KPD +TF ++ + +A + G +HC ++K G ++ + N L+D+Y KCG +
Sbjct: 415 KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMD 474
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F++M D++SW+++I F ++ MR+ G+ P+ T++G+L CS
Sbjct: 475 DLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCS 534
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+ + +G +++ + G + ++++ ++ G + M + D+V W
Sbjct: 535 LLAVRRQGKEIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTW 592
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPT----NSAALVLLCNIYASSGKWEEVARLMGS 603
+L+++ +G GK+A + ++ + +S A + + SG +E R
Sbjct: 593 TALISAFGMYGE---GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDR 649
Query: 604 MK 605
MK
Sbjct: 650 MK 651
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/596 (24%), Positives = 268/596 (44%), Gaps = 80/596 (13%)
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
NNT + + L+ SS ++ R VH I++S + +++ Y +
Sbjct: 11 NNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDP 70
Query: 132 EDARMVFDEM-PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
+ VF + P NV W ++I + NG A+ Y +M + L PD FTF S+I +
Sbjct: 71 ISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINS 130
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ + + LG +H H ++ S L NALI MY++F + +A VF ++ +D SW
Sbjct: 131 CARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSW 190
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA--NEAMSLFSEMGDRELIP 308
S+I G+ CSN +A+ ++ + ++P
Sbjct: 191 NSLISGY------------------------------CSNGFWEDALDMYHKFRMTGMVP 220
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLF 363
D T+ S+L AC S +++ +G+ +H I K G +V + N +L + E R+F
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280
Query: 364 SLMLASQT------------------------------KPDHITFNDVMGACAAMASLEM 393
S M + PD ++ + AC L++
Sbjct: 281 SKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQV 340
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G +H Y++ +G D N L+DMY KCG L +A+E+F+ + D V+W+SLI GY Q
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ 400
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G +E L+ F+ M+ +P+ VT V +L+ S + + +G ++ + ++G
Sbjct: 401 SGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVI-KFGFEAELI 458
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI--- 570
+ ++D+ A+ G + + + M+ DI+ W +++AS + VG + +
Sbjct: 459 IGNSLLDVYAKCGEMDDLLKVFSYMS-AHDIISWNTVIASSVHFDDCTVGFQMINEMRTE 517
Query: 571 -LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR-KVP-GQSWIEIQTK 623
L D ++ +C++ A + +E+ G + + G VP G + IE+ +K
Sbjct: 518 GLMPDEATVLGILPMCSLLAVRRQGKEIH---GYIFKSGFESNVPIGNALIEMYSK 570
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 148/316 (46%), Gaps = 38/316 (12%)
Query: 288 CSNANEA---------MSLFSEMGDRELIPDGLTVRSLLCACTSPLSL---YQGMQIHSY 335
CSN N SL + + P TV SL+ TS LSL + G I Y
Sbjct: 7 CSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLII--TSGLSLSVIFSGKLISKY 64
Query: 336 IIKKGFYSNVPVCNAI---------------LQHQA--GELFRLFSLMLASQTKPDHITF 378
K S+V V +I L H + ++ M + +PD TF
Sbjct: 65 AQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTF 124
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ +CA + LE+G +H + M+ G D+++ N L+DMY + L +AR +F M +
Sbjct: 125 PSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN 184
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D VSW+SLI GY G E+AL ++ + R +G+ P+ T+ VL AC + V+EG+ +
Sbjct: 185 RDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAV 244
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +++ + GI + ++ + + R+ EA ++MA D V W +++ G
Sbjct: 245 HGVIE-KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDS-VTWNTMIC-----G 297
Query: 559 NVDVGKRAAENILKID 574
+G+ A L +D
Sbjct: 298 YAQLGRHEASVKLFMD 313
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 342/643 (53%), Gaps = 73/643 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNN------TNFR--IRPSTYADLISACSSLRSLQ---- 97
LF + +NL A + + QN FR +R + + S+LR+ Q
Sbjct: 156 LFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP 215
Query: 98 ----LGRKVHDHILSSKCQPDAVLHNHILNMYGKC-GSLEDARMVFDEMPQRNVVSWTAM 152
LG ++H I ++ D V+ N +++MYG C S DAR VFD + RN +SW ++
Sbjct: 216 SGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSI 275
Query: 153 IAGCSQNGQENAAIELYVQMLQSGL----MP-DQFTFGSIIRACSGLCCVGLGRQLHAHV 207
I+ S+ G +A +L+ M + GL P D F+ S++ GR++HAHV
Sbjct: 276 ISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRK-----GREVHAHV 330
Query: 208 IKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFA 263
I++ + ++ N L+ MY K I DA +VF + KD SW S+I G + + A
Sbjct: 331 IRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDA 390
Query: 264 RTVFNEMESPNLASWNTIIAGVA-SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
+F+ M + SWN++I ++ S ++ ++A+ F +M +T ++L A +S
Sbjct: 391 AEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSS 450
Query: 323 PLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFS------------ 364
LSL++ QIH+ ++K + + NA+L + E ++F+
Sbjct: 451 -LSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWN 509
Query: 365 --------------------LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
M+ + D TF ++ ACA++A+LE G ++H ++
Sbjct: 510 SMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRA 569
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L DV V + L+DMY KCG + A F M +V SW+S+I GYA+ G GE+ALKLF
Sbjct: 570 CLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLF 629
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM G P+HVT VGVL+ACSHVG VEEG + ++ M Y + P E SC+VDLL R
Sbjct: 630 TRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGR 689
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLL-ASCKTHG-NVDVGKRAAENILKIDPTNSAALV 582
AG++ E DFIN M ++++W+++L A C+ +G N ++G+RAAE +L+++P N+ V
Sbjct: 690 AGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYV 749
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL N+YAS KWE+VA+ +MKE V+K G SW+ ++ +H
Sbjct: 750 LLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVH 792
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 153/595 (25%), Positives = 262/595 (44%), Gaps = 78/595 (13%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
NT T+ LI+ + R++H + + L N ++N+Y + G L
Sbjct: 92 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 151
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC- 191
A+ +FDEM RN+V+W +I+G +QNG+ + A + M+++G +P+ + FGS +RAC
Sbjct: 152 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 211
Query: 192 -SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK-FDRILDAWNVFSSIARKDITS 249
SG LG Q+H + K+ +GS ++ N LI+MY D DA +VF I ++ S
Sbjct: 212 ESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS 271
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS--EMGDRE-- 305
W S+I +S+ A + ++ S G+ N+A S FS E G R+
Sbjct: 272 WNSIISVYSRRGDAVSAYDLFSSMQK-------EGLGFSFKPNDAFSEFSVLEEGRRKGR 324
Query: 306 -----LIPDGLTVRS------LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+I GL L+ ++ + +++K S + + + Q+
Sbjct: 325 EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN 384
Query: 355 QAGE-LFRLFSLMLASQTKPDHITFNDVMGA----------------------------- 384
+ E +FSLM + D +++N V+GA
Sbjct: 385 ECSEDAAEMFSLM----PEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVT 440
Query: 385 ----CAAMASL---EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM- 436
+A++SL E+ Q+H ++K L+ D + N L+ Y KCG + ++F M
Sbjct: 441 FINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMS 500
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
E D VSW+S+I GY +A+ L M G R + T +L+AC+ V +E G+
Sbjct: 501 ETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGM 560
Query: 497 QLYRIMQNEYGIIPTRERR----SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+++ GI E S +VD+ ++ GR+ A F M ++ W S+++
Sbjct: 561 EVHAC-----GIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPL-RNVYSWNSMIS 614
Query: 553 SCKTHGNVDVG-KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
HG+ + K +L P + V + + + G EE SM E
Sbjct: 615 GYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSE 669
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 208/489 (42%), Gaps = 121/489 (24%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
++ + RR D + +DLFSS+ K+ L F +P+ D S S L
Sbjct: 275 IISVYSRRGDAVSAYDLFSSMQKEGL---------------GFSFKPN---DAFSEFSVL 316
Query: 94 RS-LQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
+ GR+VH H++ + + V + N ++NMY K G++ DA VF+ M +++ VSW +
Sbjct: 317 EEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNS 376
Query: 152 MIAG-----CSQNGQE---------------------------NAAIELYVQMLQSGLMP 179
+I+G CS++ E + A++ ++QM++ G
Sbjct: 377 LISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGL 436
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+ TF +I+ A S L + Q+HA V+K NAL++ Y K + + +F
Sbjct: 437 SRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF 496
Query: 240 SSIAR-KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
+ ++ +D SW SMI G+ + NE+ ++AM L
Sbjct: 497 ARMSETRDEVSWNSMISGY--------IHNEL--------------------LHKAMDLV 528
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------ 352
M + D T ++L AC S +L +GM++H+ I+ S+V V +A++
Sbjct: 529 WFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKC 588
Query: 353 -----------------------------QHQAGE-LFRLFSLMLASQTKPDHITFNDVM 382
+H GE +LF+ M+ PDH+TF V+
Sbjct: 589 GRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVL 648
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFV--MNGLMDMYVKCGSLGSARELFNFME-DP 439
AC+ + +E G + H M L V + ++D+ + G L + N M P
Sbjct: 649 SACSHVGFVEEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKP 707
Query: 440 DVVSWSSLI 448
+V+ W +++
Sbjct: 708 NVLIWRTVL 716
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/613 (32%), Positives = 316/613 (51%), Gaps = 78/613 (12%)
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
S+ SL R+ H HIL + D L +L+ Y DA +V D +P+ NV S++
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
+I S+ Q + A+ + QML GLMPD S ++AC+GL + RQ+H S
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVS 143
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVF 267
S Q++L+ MY K ++I DA VF + D+ SW +++ +++ +D A+ +F
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 268 NEME----SPNLASWNTIIAGVASCSNANEAMSLFSEM-------------------GDR 304
+EM PNL SWN +IAG +EA+ +F +M GD
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263
Query: 305 E----------------LIPDGLTVRSLL-----CACTSPLS------------------ 325
E L+ D +L+ C+CTS +S
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFI 323
Query: 326 --LYQGMQIHS------YIIKKGFYSNVPVCNAILQ--HQAG---ELFRLFSLMLASQTK 372
L + Q+ S + +G NV +++ Q G E LF M + K
Sbjct: 324 FGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVK 383
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ +T ++ AC +A+L G HC+ ++ G++ DV+V + L+DMY KCG + ++R
Sbjct: 384 PNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRIC 443
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ + ++V W+++I GYA G +EA+++F M+ SG +P+ ++ VL+ACS GL
Sbjct: 444 FDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLT 503
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
EEG + M ++YGI E +C+V LL+RAG++ +A I +M + D VW +LL+
Sbjct: 504 EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
SC+ H NV +G+ AAE + +++P+N +LL NIYAS G W EV R+ MK +G+RK
Sbjct: 564 SCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 613 PGQSWIEIQTKIH 625
PG SWIE++ K+H
Sbjct: 624 PGCSWIEVKNKVH 636
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 36/222 (16%)
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL------------------ 359
C ++ SL Q Q H++I+K G +++ + +L H A +
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80
Query: 360 ------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
FS ML PD+ + ACA +++L+ Q+H
Sbjct: 81 SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+G D FV + L+ MY+KC + A +F+ M +PDVVSWS+L+ YA+ GC +EA
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
+LF M SGV+PN ++ G++ +H GL E + ++ M
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMH 242
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 55 CKQNLYN-EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
C QN + EAL F +Q + T L+ AC ++ +L G+ H L
Sbjct: 361 CSQNGRDIEALELFREMQI-AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIST 419
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D + + +++MY KCG ++ +R+ FD +P +N+V W A+IAG + +G+ A+E++ M
Sbjct: 420 DVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQ 479
Query: 174 QSGLMPDQFTFGSIIRACS 192
+SG PD +F ++ ACS
Sbjct: 480 RSGQKPDIISFTCVLSACS 498
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 302/525 (57%), Gaps = 25/525 (4%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++ Y G + +AR VFD MP+RNVVSWTAM+ G + G + A L+ QM + ++
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV 223
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHA-HVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
G +++ GR A + ++++ +I Y + R+++A
Sbjct: 224 SWTVMLGGLLQE---------GRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARM 274
Query: 238 VFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
+F + R+++ SW +MI G+ ++D AR +F M N SW ++ G +C +EA
Sbjct: 275 LFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEA 334
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK--GFYSNVPVCNAIL 352
LF+ M + ++ +++ + + Q+ + +K G +S + +
Sbjct: 335 SELFNAMPIKSVV----ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMI---KVY 387
Query: 353 QHQAGEL--FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
+ + EL LF +M +P+ + V+ CA +A+L+ G ++H ++++ LDV
Sbjct: 388 ERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDV 447
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+V + L+ MY+KCG+L A+++F+ DVV W+S+I GYAQ G G EAL++F M S
Sbjct: 448 YVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFS 507
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G+ P+ VT VGVL+ACS+ G V++GL+++ M+ +Y + E +C+VDLL RAG+++E
Sbjct: 508 GIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNE 567
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A D I +M + D ++W +LL +C+TH +D+ + AA+ +L ++P N+ +LL NIYAS
Sbjct: 568 AMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYAS 627
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGNDISGN 634
G+W++VA L +M++R V K PG SWI ++ K+H +G D SG+
Sbjct: 628 QGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGH 672
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 165/379 (43%), Gaps = 82/379 (21%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+ D V +++ Y + G L +ARM+FDEMP+RNVVSWT MI G QN Q + A +L+
Sbjct: 250 EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF-- 307
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
+MP++ + +S A++ YT R
Sbjct: 308 ----EVMPEK---------------------------------NEVSWTAMLKGYTNCGR 330
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASC 288
+ +A +F+++ K + + +MI F + + AR VF++M + +W+ +I
Sbjct: 331 LDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERK 390
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
+A+ LF M + P+ ++ S+L C +L G +IH+ +++ F +V V
Sbjct: 391 GLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVA 450
Query: 349 NAIL-----------------------------------QHQAG-ELFRLFSLMLASQTK 372
+ +L QH G E R+F M S
Sbjct: 451 SVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIM 510
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG--LMDMYVKCGSLGSAR 430
PD +TF V+ AC+ +++ G ++ M+T ++ + + ++D+ + G L A
Sbjct: 511 PDDVTFVGVLSACSYTGNVKKGLEIFNS-METKYQVEQKIEHYACMVDLLGRAGKLNEAM 569
Query: 431 ELFNFME-DPDVVSWSSLI 448
+L M + D + W +L+
Sbjct: 570 DLIEKMPMEADAIIWGALL 588
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 133/287 (46%), Gaps = 14/287 (4%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLI 87
+A +V D + + W + ++ L +AL F +Q IRP+ + ++
Sbjct: 364 KARQVFDQMREKDEGTWS-AMIKVYERKGLELDALELFRMMQREG---IRPNFPSLISVL 419
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S C+ L +L GR++H ++ S+ D + + +L+MY KCG+L A+ VFD ++VV
Sbjct: 420 SVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV 479
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
W ++I G +Q+G A+ ++ M SG+MPD TF ++ ACS V G ++ +
Sbjct: 480 MWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSM 539
Query: 208 IKSEHGSHLISQNA-LIAMYTKFDRILDAWNVFSSIARK-DITSWGSMIDG---FSKLDF 262
I A ++ + + ++ +A ++ + + D WG+++ KLD
Sbjct: 540 ETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDL 599
Query: 263 ARTVFNE---MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
A + +E N + + AS ++ L M DR +
Sbjct: 600 AEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRV 646
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L+ Y + G + AR +F+ M D +++SW+S++ GY Q +EA +F +M
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER--- 158
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
N ++ G+++ + G++ E +++ M + T R V + G + EAE
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYV-----KEGMISEAET 212
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
QM + ++V W +L G +D R + + + D ++ Y G+
Sbjct: 213 LFWQMP-EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMI---GGYCQVGR 268
Query: 594 WEEVARLMGSMKERGV 609
E L M R V
Sbjct: 269 LVEARMLFDEMPRRNV 284
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 95/228 (41%), Gaps = 36/228 (15%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++ N ++ Y + A+ +F+ M + + +SW+ L+ GY G EA ++F RM
Sbjct: 128 NIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMP 187
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE----------------------- 505
V V+ ++ G++ E L+ M +
Sbjct: 188 ERNV----VSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACR 243
Query: 506 -YGIIPTRE--RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ ++P ++ R+ ++ + GR+ EA ++M ++V W +++ + VD+
Sbjct: 244 LFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMP-RRNVVSWTTMITGYVQNQQVDI 302
Query: 563 GKRAAENILKIDP-TNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
++ + ++ P N + + Y + G+ +E + L +M + V
Sbjct: 303 ARK----LFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSV 346
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 318/644 (49%), Gaps = 70/644 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ + C L A +V D R W+ + S+ EA F +Q R
Sbjct: 203 NTYTKCGSLTDARKVFDGMPCRSVGTWN-SMISAYSISERSGEAFFIFQRMQQEGE-RCD 260
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ ++ AC + +LQ G+ V + I + + D + ++ MY +C S EDA VF
Sbjct: 261 RVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFG 320
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M Q N+++W+A+I + +G A+ + M Q G++P++ TF S++ + GL
Sbjct: 321 RMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPS--GL 378
Query: 200 GRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
H++ +EHG +NAL+ +Y + +
Sbjct: 379 EELSRIHLLITEHGLDDTTTMRNALVNVYGRCE--------------------------- 411
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
D ARTVF+++E PNL SWN++I C ++A+ LF M + + PD + ++L
Sbjct: 412 -SPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTIL 470
Query: 318 CACT----------------------SPL------SLYQG---MQIHSYIIKKGFYSNVP 346
ACT SPL ++Y + + I+++ +
Sbjct: 471 GACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQIT 530
Query: 347 VCNAI-----LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
N + L ++ E + + D +TF V+ AC + SL G +H
Sbjct: 531 AWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNA 590
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ GL DV V N L +MY KCGS+ +AR +F+ M VSW+ ++ YAQ G EE L
Sbjct: 591 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 650
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
KL R+M GV+ N +T V VL++CSH GL+ EG Q + + ++ GI E C+VDL
Sbjct: 651 KLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 710
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAG++ EAE +I++M + IV W SLL +C+ ++D GK AA +L++DP NS+A
Sbjct: 711 LGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSAS 770
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
V+L NIY+ G W+ A+L +M R V+KVPG S I+++ K+H
Sbjct: 771 VVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVH 814
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/553 (25%), Positives = 248/553 (44%), Gaps = 68/553 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++++C S R L+ G VH L + ++ +LNMYGKCG+L DA+ VF+EM
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 142 PQRNVVSWTAMIAGCSQNG-QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
++NVV+W AM+ S G A+EL+ +ML G+ + TF +++ + + G
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+ +H+ V +SEH + AL+ YTK + DA VF + + + +W SMI +S
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ + EA +F M D +T S+L AC
Sbjct: 240 E----------------------------RSGEAFFIFQRMQQEGERCDRVTFLSILDAC 271
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
+P +L G + I + F ++ V A++ A
Sbjct: 272 VNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWS 331
Query: 357 ------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
GE R F +M P+ +TF ++ + LE +++H I +
Sbjct: 332 AIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEH 391
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
GL + N L+++Y +C S AR +F+ +E P+++SW+S+I Y Q ++AL+LF
Sbjct: 392 GLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLF 451
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
R M+ G++P+ V + +L AC+ +G +L E G+ + ++ +V++ A+
Sbjct: 452 RTMQQQGIQPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAK 510
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI-LKIDPTNSAALVL 583
AG + AE + +M + I W L+ HG A + + L+ P + +
Sbjct: 511 AGELDVAEVILQEMD-EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFIS 569
Query: 584 LCNIYASSGKWEE 596
+ N SS E
Sbjct: 570 VLNACTSSTSLAE 582
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 227/478 (47%), Gaps = 17/478 (3%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY +CGSL DA F ++ RNVVSW MI+ S A+ L+ ML G+ P+ T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+++ +C + G +HA ++ + + AL+ MY K +LDA +VF +A
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 244 RKDITSWGSMIDGFS------KLD---FARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
K++ +W +M+ +S KL F R + +++ N+ ++ ++ V +
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKA-NVITFLNVLNSVVDPDALRKG 179
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQ 353
+ S + + E D +L+ T SL ++ + + + N + +
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
++GE F +F M + D +TF ++ AC +L+ G + I +T LD+FV
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
L+ MY +C S A ++F M+ ++++WS++I +A G EAL+ FR M+ G+
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
PN VT + +L + +EE L ++ E+G+ T R+ +V++ R +A
Sbjct: 360 PNRVTFISLLNGFTTPSGLEE-LSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418
Query: 534 FINQMAFDDDIVVWKSLLA---SCKTHGN-VDVGKRAAENILKIDPTNSAALVLLCNI 587
+Q+ +++ W S++ C+ H + + + + + ++ D N ++ C I
Sbjct: 419 VFDQLEL-PNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTI 475
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 237/509 (46%), Gaps = 35/509 (6%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +++++ +L+ G+ +H + S+ D ++ ++N Y KCGSL DAR VFD M
Sbjct: 162 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 221
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+V +W +MI+ S + + A ++ +M Q G D+ TF SI+ AC + G+
Sbjct: 222 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGK 281
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-- 259
+ + ++ L ALI MY + DA VF + + ++ +W ++I F+
Sbjct: 282 HVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHG 341
Query: 260 -----LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS---LFSEMGDRELIPDGL 311
L + R + E PN ++ +++ G + S E L +E G + D
Sbjct: 342 HCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG----LDDTT 397
Query: 312 TVRSLLC----ACTSP---LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFS 364
T+R+ L C SP +++ +++ + I + S + + +H + +LF
Sbjct: 398 TMRNALVNVYGRCESPDDARTVFDQLELPNLI---SWNSMIGIYVQCERHD--DALQLFR 452
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
M +PD + F ++GAC + +H + ++GL V L++MY K G
Sbjct: 453 TMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAG 512
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
L A + M++ + +W+ LI GYA G EAL+ +++++ + + VT + VL
Sbjct: 513 ELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLN 572
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
AC+ + EG ++ E G+ ++ + ++ ++ G + A + M
Sbjct: 573 ACTSSTSLAEGKMIHS-NAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI-RSA 630
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKI 573
V W +L + HG +E +LK+
Sbjct: 631 VSWNGMLQAYAQHGE-------SEEVLKL 652
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 298/551 (54%), Gaps = 42/551 (7%)
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
L H++ S++ AR V D+ P SW ++I + +G ++ LY++ML+S
Sbjct: 29 LQTHLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSS 88
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
P FTF +++ACS L V G Q+H HV++ GS L N+LI MY K R+ A
Sbjct: 89 TKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSAR 148
Query: 237 NVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEME-SPNLASWNTIIAGVASCSNAN 292
N + + +D SW S+I G+ +++ AR +F EM N+ W +I G +
Sbjct: 149 NFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFV 208
Query: 293 EAMSLFSEM--GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI-------------- 336
E +SLF +M E+ P+ T+ LL AC++ + G + +I
Sbjct: 209 EMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTA 268
Query: 337 ----------IKKGFY-------SNVPVCNAILQH--QAG---ELFRLFSLMLASQTKPD 374
++K + N+P NAI+ Q G E L+ M A KP+
Sbjct: 269 LIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPN 328
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
IT +V+ ACA + +LE+G ++H Y+ + GL L+V + L+DMY KCG + A +F
Sbjct: 329 EITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFV 388
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ DV W+++I+G A G G ++L +F +M +GV+PN VT +GVL+AC+H GLVEE
Sbjct: 389 KTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEE 448
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G + M +++G+ P E +C+VDLL RAG + EA + + M D ++W +LL++C
Sbjct: 449 GRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSAC 508
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H N+++ + +E I+ N +LL NIYASSG+W++VAR+ +KE+ ++K G
Sbjct: 509 RIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSG 568
Query: 615 QSWIEIQTKIH 625
SW+E+ +H
Sbjct: 569 CSWVEVDGVVH 579
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 171/350 (48%), Gaps = 37/350 (10%)
Query: 58 NLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
+L+ + LV+ D +Q N +T L+SACS+L + ++GR + I +K + +L
Sbjct: 212 SLFRQMLVSADEVQPNA------ATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTIL 265
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+++MY KCG +E A +FD + +N+ SW A+I GC Q G AI+LY M +
Sbjct: 266 VTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSV 325
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
P++ T +++ AC+GL + LGR++H ++ ++ ++I AL+ MY K +I DA
Sbjct: 326 KPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACL 385
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+F + KD+ A WN +I G+A + +++++
Sbjct: 386 IFVKTSEKDV----------------------------ALWNAMILGLAYHGDGRDSLAV 417
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQG-MQIHSYIIKKGFYSNVP--VCNAILQH 354
FS+M + P+ +T +L AC + +G +Q S K G + C L
Sbjct: 418 FSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLG 477
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+AG L + L+ PD I + ++ AC +LE+ ++ IM +
Sbjct: 478 RAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMAS 527
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 202/495 (40%), Gaps = 106/495 (21%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYAD 85
+D A V+D D W+ + + + N + L+++T +PS T+
Sbjct: 43 IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSST----KPSNFTFPF 98
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR- 144
++ ACS+L S+ G ++H H+L D + N +++MY KC L+ AR +D+M R
Sbjct: 99 VLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRD 158
Query: 145 -------------------------------NVVSWTAMIAGCSQNGQENAAIELYVQML 173
NVV WTAMI G + G + L+ QML
Sbjct: 159 EVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQML 218
Query: 174 QSG--LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
S + P+ T ++ ACS LC +GR L + ++ + I ALI MY+K
Sbjct: 219 VSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGD 278
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ AW +F ++ K++ SWN II G
Sbjct: 279 VEKAWRIFDGVSCKNL----------------------------PSWNAIITGCVQGGLL 310
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
EA+ L+ M + + P+ +T+ ++L AC +L G ++H Y+ + G NV + A+
Sbjct: 311 EEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATAL 370
Query: 352 LQHQA--GEL----------------------------------FRLFSLMLASQTKPDH 375
+ A G++ +FS M+ + +P+
Sbjct: 371 VDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPND 430
Query: 376 ITFNDVMGACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF- 433
+TF V+ AC +E G Q K GL+ + ++D+ + G L A EL
Sbjct: 431 VTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQ 490
Query: 434 NFMEDPDVVSWSSLI 448
N + PD + W +L+
Sbjct: 491 NMLIPPDSIIWGALL 505
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 300/585 (51%), Gaps = 64/585 (10%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ P + L+ S+ L +H + DA + +++ Y G+++ AR
Sbjct: 133 EVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARH 192
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD++ +++VSWT M+A ++N +++L+ QM G P+ FT +++C GL
Sbjct: 193 VFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEA 252
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+G+ +H +K + L AL+ +Y K I+DA
Sbjct: 253 FNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDA--------------------- 291
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+ +F EM +L W+ +IA A + EA+ LF M ++P+ T S+
Sbjct: 292 -------QRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASV 344
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL--------------- 359
L AC S +SL G QIHS ++K G SNV V NAI+ A GE+
Sbjct: 345 LQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND 404
Query: 360 -------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
LF+ ML +P +T++ V+ A A++A+LE G Q+H
Sbjct: 405 VTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSL 464
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+KT D V N L+DMY KCG + AR F+ M D VSW+++I GY+ G EA
Sbjct: 465 TIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEA 524
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L LF M+ + +PN +T VGVL+ACS+ GL+ +G + M +Y I P E +C+V
Sbjct: 525 LNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVW 584
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R GR EA I ++A+ ++VW++LL +C H VD+G+ A+++L+++P + A
Sbjct: 585 LLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDAT 644
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N+YA++G+W+ VA + M+++ VRK PG SW+E Q +H
Sbjct: 645 HVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVH 689
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 36/217 (16%)
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G LHC+I+K G +LD+F N L++ YV+ SL A +LF+ M + +S+ +L GY++
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
+AL R+ G N +L + L L+
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLH-------------- 159
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+CV L H A+ F+ +L+ + GNVDV + ++I
Sbjct: 160 --ACVYKL------GHHADAFVG-----------TALIDAYSVRGNVDVARHVFDDICCK 200
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
D + +V YA + +EE +L M+ G +
Sbjct: 201 DMVSWTGMV---ACYAENCFYEESLQLFNQMRIMGYK 234
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 298/548 (54%), Gaps = 29/548 (5%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
C ++ + G +H+ IL++ + L ++ Y K G AR VFD MP+R VVSW
Sbjct: 7 CIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSW 66
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
+A I+G SQNG A+ +++ ML++G +QFT+GS++RAC+GL C+ G Q+ + K
Sbjct: 67 SAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEK 126
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA------ 263
S S+LI Q+AL+ +++K ++ DA +F + +D+ SW ++I ++ F+
Sbjct: 127 SRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRM 186
Query: 264 -RTVFNEMESPNLASWNTIIAGVASCSNAN---EAMSLFSEMGDRELIPDGLTVRSLLCA 319
R++ E SP+L ++ +++ S+ + L ++G I ++
Sbjct: 187 FRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAK 246
Query: 320 CTSPLS---LYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------GELFRLFSLMLASQ 370
C S S LY+ M + I C A++ A + LF +
Sbjct: 247 CESLASAHCLYKSMPMKDMI----------SCTALMTGYARDSNYSSKALDLFKEIQQMH 296
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
K D + + CA ++SL +G Q+H +K DV + N L+DMY K G + A
Sbjct: 297 MKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDAN 356
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
FN ME+ +V+SW+SLI GY G G EA+ LF++M G++PN +T + +L AC+H G
Sbjct: 357 RAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCG 416
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
L EG + + M ++Y I+P E SC+VDL AR G + EA + IN+M + +W ++
Sbjct: 417 LTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAI 476
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L +C +GN+ + + AA ++ K+DP NS V+L +IYA++G W+ ++ M+ER ++
Sbjct: 477 LGACYIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLK 536
Query: 611 KVPGQSWI 618
K PG S+I
Sbjct: 537 KAPGYSFI 544
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 218/486 (44%), Gaps = 52/486 (10%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYADLISA 89
A +V D R W + S + Y +AL+ F D L+ F+ TY ++ A
Sbjct: 51 ARKVFDRMPERTVVSWSAQI-SGYSQNGCYQDALLVFLDMLR--AGFKANQFTYGSVLRA 107
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
C+ LR LQ G ++ + S+ + ++ + +L+++ KCG +EDA +F M +R+VVSW
Sbjct: 108 CTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSW 167
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
A+I + G + ++ M+Q G+ PD FTFGS+++A V Q+H +I+
Sbjct: 168 NAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQ 227
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
+GSH+ +LI Y K + + A ++ S+ KD+ S +++ G+++
Sbjct: 228 LGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYAR---------- 277
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
+ +++A+ LF E+ + D + + S+ C + SL G
Sbjct: 278 -----------------DSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVG 320
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQA--GELF---RLFSLMLASQTKPDHITFNDVMGA 384
QIH+ +K +V + NA++ A GE+ R F+ M + + I++ ++
Sbjct: 321 RQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEM----EEKNVISWTSLITG 376
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-----P 439
+ L + GL + L+ CG G E FN M P
Sbjct: 377 YGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILP 436
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG---LVEE-G 495
+S ++ +A+ G EEA L +M ++PN +L AC G L EE
Sbjct: 437 RAEHFSCMVDLFARGGLLEEAYNLINKMN---IKPNASLWGAILGACYIYGNMPLAEEAA 493
Query: 496 LQLYRI 501
+ L+++
Sbjct: 494 IHLFKM 499
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 203/624 (32%), Positives = 304/624 (48%), Gaps = 103/624 (16%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
F ++ T+ +L+ AC + R L G+ +H S P L NH +Y KCGSL +A
Sbjct: 4 TFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNA 63
Query: 135 -------------------------------RMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
R VFDE+PQ ++VS+ +IA + G+
Sbjct: 64 QTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECR 123
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A+ L+ ++ + D FT +I AC VGL RQLH V+ + + NA++
Sbjct: 124 PALRLFAEVRELRFGLDGFTLSGVIIACGDD--VGLVRQLHCFVVVCGYDCYASVNNAVL 181
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES---PNLASWNT 280
A Y++ GF L+ AR VF EM + SWN
Sbjct: 182 ACYSR--------------------------KGF--LNEARRVFREMGEGGGRDEVSWNA 213
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I EA+ LF EM R L D T+ S+L A T L GMQ H +IK G
Sbjct: 214 MIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSG 273
Query: 341 FYSNVPV-----------------CNAILQHQAGELFRLFSLMLASQTK----------- 372
F+ N V C + + A L++ M++ ++
Sbjct: 274 FHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWC 333
Query: 373 ----------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYV 421
PD +F V AC+ ++S +G Q+H +K+ + + V V N L+ MY
Sbjct: 334 FREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYS 393
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG++ AR +F+ M + ++VS +S+I GYAQ G E+L+LF M + PN +T +
Sbjct: 394 KCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIA 453
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL+AC H G VEEG + + +M+ + I P E SC++DLL RAG++ EAE I M F+
Sbjct: 454 VLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFN 513
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ W +LL +C+ HGNV++ +AA L+++P N+A V+L N+YAS+ +WEE A +
Sbjct: 514 PGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVK 573
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
M+ERGV+K PG SWIEI K+H
Sbjct: 574 RLMRERGVKKKPGCSWIEIDKKVH 597
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
++L + + F +Q+N F ++ + SACS+L S +G++VH + S + V
Sbjct: 324 EDLSEDGIWCFREMQHN-GFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRV 382
Query: 117 -LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++N ++ MY KCG++ DAR VFD MP+ N+VS +MIAG +Q+G E ++ L+ MLQ
Sbjct: 383 SVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQK 442
Query: 176 GLMPDQFTFGSIIRAC 191
+ P+ TF +++ AC
Sbjct: 443 DIAPNTITFIAVLSAC 458
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 310/589 (52%), Gaps = 61/589 (10%)
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++ +YA ++SAC ++ LG+ +H + L N +++MY KC ++ AR
Sbjct: 106 LKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHAR 165
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SG 193
++F+ + + VSW ++I G ++ G ++L V+M +GL + FT GS +++C +
Sbjct: 166 LLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNL 225
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
V G+ LH + +K ++ AL+ MY K + DA +F + +++ + +M
Sbjct: 226 NNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAM 285
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
I GF +++ ++ C A EA+ LFS+M + + P T
Sbjct: 286 IAGF------------IQTEDIDK---------EC--AYEALKLFSQMQRQGIKPSDFTF 322
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------- 353
S++ C + G QIH++I K S+ + + +++
Sbjct: 323 SSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPK 382
Query: 354 -------------HQAGEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
Q G+ LF +LAS KPD ++ ACA +A+ G Q+
Sbjct: 383 LDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQV 442
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H Y +KTG+ V N + MY K G+L SA+ F +++PDVVSWS +I AQ G
Sbjct: 443 HGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHA 502
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
++A+ LF M+S G+ PN +T +GVLTACSH GLVEEGL+ Y M+ +Y + + +C
Sbjct: 503 KDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTC 562
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+VDLL+RAGR+ +A++FI F D V+W++LL+ C+ + ++ GK AE ++++DP
Sbjct: 563 IVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQE 622
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
S++ VLL NIY +G ++ MK+RG+RK PGQSWIE+ ++H+
Sbjct: 623 SSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHS 671
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 232/527 (44%), Gaps = 73/527 (13%)
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
F + Y L+ S S G+ H H++ + P L N+ LN+Y K G + +A+
Sbjct: 5 FPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQ 64
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD M +R+V+S+ +I+G G + AI L+ + + L D+F++ ++ AC +
Sbjct: 65 KLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIK 124
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
LG+ +H I G + N LI MY K +RI A +F S D SW S+I
Sbjct: 125 DFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLIT 184
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G++++ + EM + L +M L + T+ S
Sbjct: 185 GYARVG----AYEEM------------------------LKLLVKMHHTGLRLNAFTLGS 216
Query: 316 LLCACTSPLS--LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------ELFR---- 361
L +C L+ + G +H Y +K+G ++ V A+L A +LFR
Sbjct: 217 ALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPN 276
Query: 362 -----------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLE 392
LFS M KP TF+ ++ C + + E
Sbjct: 277 QNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFE 336
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G Q+H +I K + D F+ + L+++Y GS + FN D+VSW+++I GYA
Sbjct: 337 YGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYA 396
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
Q G E AL LF + +SG +P+ + +L+AC+ V G Q++ GI
Sbjct: 397 QNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKT-GIGTLA 455
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
++ + + A++G + A+ ++ + D+V W ++ S HG+
Sbjct: 456 IVQNSQISMYAKSGNLDSAKITFEEIK-NPDVVSWSVMICSNAQHGH 501
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 158/346 (45%), Gaps = 46/346 (13%)
Query: 62 EALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
EAL F +Q I+PS T++ +I C+ + + + G+++H HI Q D + +
Sbjct: 302 EALKLFSQMQRQG---IKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGS 358
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++ +Y GS ED F+ P+ ++VSWT MIAG +QNGQ +A+ L+ ++L SG P
Sbjct: 359 TLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKP 418
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D+F +++ AC+ + G Q+H + +K+ G+ I QN+ I+MY K + A F
Sbjct: 419 DEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITF 478
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN-----ANEA 294
I D+ SW MI CSN A +A
Sbjct: 479 EEIKNPDVVSWSVMI---------------------------------CSNAQHGHAKDA 505
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI-- 351
++LF M + P+ +T +L AC+ + +G++ + + K NV C I
Sbjct: 506 INLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVD 565
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
L +AG L + +L S + + ++ C + G +
Sbjct: 566 LLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHV 611
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 193/478 (40%), Gaps = 79/478 (16%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D A + +S D++ L + + Y E L ++T R+
Sbjct: 153 DMYCKCERIDHARLLFESS-DELDNVSWNSLITGYARVGAYEEMLKLL-VKMHHTGLRLN 210
Query: 80 PSTYADLISACS-SLRSL-QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
T + +C +L ++ G+ +H + + D V+ +L+MY K G L DA +
Sbjct: 211 AFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQL 270
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENA-----AIELYVQMLQSGLMPDQFTFGSIIRACS 192
F P +NVV + AMIAG Q + A++L+ QM + G+ P FTF SII+ C+
Sbjct: 271 FRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICN 330
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ G+Q+HAH+ K S + LI +Y+ D F+S + DI S
Sbjct: 331 HIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVS--- 387
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
W T+IAG A A++LF E+ PD
Sbjct: 388 -------------------------WTTMIAGYAQNGQFESALALFYELLASGKKPDEFI 422
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYS----------------------------- 343
+ ++L AC + G Q+H Y +K G +
Sbjct: 423 ITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK 482
Query: 344 -------NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+V +C+ A + LF LM + P+ ITF V+ AC+ +E G +
Sbjct: 483 NPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLR 542
Query: 397 LHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELF---NFMEDPDVVSWSSLIVG 450
+ + K + ++V ++D+ + G L A+ F + P V W +L+ G
Sbjct: 543 YYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHP--VMWRTLLSG 598
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 298/589 (50%), Gaps = 75/589 (12%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R ADL+ A + SL+ G ++H ++ D +L+N++++MY KCG L A VF
Sbjct: 3 RRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVF 62
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D MP+RNVVSWTA++ G +G+ + L+ +M SG P++FT + ++AC G G
Sbjct: 63 DGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAG 122
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
+ Q+H +++ H + N+L+ MY+K DA
Sbjct: 123 V--QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDA----------------------- 157
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-ELIPDGLTVRSLL 317
R VF+ + S NLA+WN++I+G A +++ +F EM R + PD T SLL
Sbjct: 158 -----RRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLL 212
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
AC+ + +G Q+H+ + +G P NAIL
Sbjct: 213 KACSGLGAAREGAQVHAAMAVRGVS---PASNAILAGALLDVYVKCHRLPVAMQVFDGLE 269
Query: 353 ----------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+ Q E LF +S + D + V+ A A +E G Q
Sbjct: 270 RRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQ 329
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+HCY KT LDV V N L+DMY+KCG G A F M +VVSW+++I G + G
Sbjct: 330 VHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGH 389
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G EA+ LF M++ GV + V + +L+ACSH GLV+E + + + + + P E +
Sbjct: 390 GREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYA 449
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL RAG + EA++ I M + + VW++LL++C+ H +V VG+ + +L +D
Sbjct: 450 CMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGD 509
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N V+L NI A +G+W E + G+M+ +G+RK G SW E+ ++H
Sbjct: 510 NPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVH 558
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 156/372 (41%), Gaps = 34/372 (9%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A V D R W+ + S ++L+ F +Q + + T+A L+ AC
Sbjct: 157 ARRVFDVIPSRNLATWN-SMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKAC 215
Query: 91 SSLRSLQLGRKVHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
S L + + G +VH + P +A+L +L++Y KC L A VFD + +RN +
Sbjct: 216 SGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQ 275
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WT +I G +Q GQ A+ L+ + SG+ D S++ + V G+Q+H +
Sbjct: 276 WTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTA 335
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
K+ G + N+L+ MY K +A F + +++ SW +MI+G K R
Sbjct: 336 KTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGR---- 391
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
EA+ LF EM + D + +LL AC+ + +
Sbjct: 392 ------------------------EAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDE 427
Query: 329 GMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+ S I + C L +AGEL L+L+ +P + ++ AC
Sbjct: 428 CRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487
Query: 386 AAMASLEMGTQL 397
+ +G ++
Sbjct: 488 RVHKDVAVGREV 499
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 294/537 (54%), Gaps = 57/537 (10%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++M+ K G L R VFD + +R VV WT +I +Q+G + A+EL++ ML++G PD
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPD 254
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
Q+T S++ AC+ L LG+QLH+ ++ S L+ MY K
Sbjct: 255 QYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSH---------- 304
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG-VASCSNANEAMSLFS 299
+G S L AR VFN M N+ +W +++G V S N+ M LF
Sbjct: 305 --------------NGQS-LHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFC 349
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------- 352
+M + + P+ +T S+L AC + G QIH++ +K V NA++
Sbjct: 350 KMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESG 409
Query: 353 -----QHQAGELFRL----FSLML----ASQTKPDH-----------ITFNDVMGACAAM 388
+H +L+ FS L S T D+ TF ++ A A++
Sbjct: 410 SIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASV 469
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
L G +LH +K G D + N L+ MY +CG L A ++F+ M D +V+SW+S+I
Sbjct: 470 GMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMI 529
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
G A+ G AL+LF M ++GV+PN VT + VL+ACSH GLV+EG + +R+MQ +G+
Sbjct: 530 SGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGL 589
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
IP E +C+VDLL R+G V +A DFIN+M D +VWK+LL +CKTH N+D+G+ AA
Sbjct: 590 IPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAAN 649
Query: 569 NILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++++++P + A VLL N+YA +G W++VAR+ M+++ + K G SW+ + IH
Sbjct: 650 HVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIH 706
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 249/528 (47%), Gaps = 83/528 (15%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHIL--SSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++PS A L++A + R + LGR + H+L S + DAV+ N +L +Y KC ++ AR
Sbjct: 45 LQPSEAAALLTAAARARDIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAAR 104
Query: 136 MVFDEMPQ--RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
VFD MP R++VSWTAM + S+NG E A+ L+ + L+ GL+P+ FT + +AC
Sbjct: 105 SVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQAC-- 162
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+L HL + A++ + K L W D++ ++
Sbjct: 163 -----FASELF----------HL-AGGAVLGLVFK----LGFWGT-------DVSVGCAL 195
Query: 254 IDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
ID F+K L R VF+ + + W +I A ++EA+ LF +M + PD
Sbjct: 196 IDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQ 255
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----------HQAGEL 359
T+ S+L ACT S G Q+HS ++ G S+ V ++ H A E+
Sbjct: 256 YTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREV 315
Query: 360 FR-----------------------------LFSLMLASQTKPDHITFNDVMGACAAMAS 390
F LF ML +P+HIT++ ++ ACA +
Sbjct: 316 FNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGD 375
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
+ G Q+H + +K+ LA V N L+ MY + GS+ AR F+ + + ++VS+S + G
Sbjct: 376 QDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG 435
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
+ ++ RM + + T +++A + VG++ +G +L+ + + G
Sbjct: 436 DGRSNTYQD--YQIERME---LGISTFTFGSLISAAASVGMLTKGQRLH-ALSLKAGFGS 489
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
R + +V + +R G + +A ++M D +++ W S+++ HG
Sbjct: 490 DRAIGNSLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLAKHG 536
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 209/432 (48%), Gaps = 27/432 (6%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYADLISACSS 92
V D R +W L + + +EA+ F D L+N F+ T + ++SAC+
Sbjct: 211 VFDGLFERTVVVWTL-LITRYAQSGYSDEAVELFLDMLENG--FQPDQYTLSSMLSACTE 267
Query: 93 LRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC---GSLEDARMVFDEMPQRNVVSW 149
L S +LG+++H L + D+ + +++MY K SL +AR VF+ MP+ NV++W
Sbjct: 268 LGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAW 327
Query: 150 TAMIAGCSQNG-QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
TA+++G Q G Q+N + L+ +ML G+ P+ T+ S+++AC+ L GRQ+H H +
Sbjct: 328 TALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCV 387
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTVF 267
KS + NAL++MY + I +A + F + K++ S+ +DG + + +
Sbjct: 388 KSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQI 447
Query: 268 NEME-SPNLASWNTIIAGVASCSNANE-----AMSLFSEMGDRELIPDGLTVRSLLCA-C 320
ME + ++ ++I+ AS + A+SL + G I + L C
Sbjct: 448 ERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYL 507
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQTKPDHITFN 379
++ M H+ I S + + + +H A LF M+A+ KP+ +T+
Sbjct: 508 VDACQVFDEMNDHNVI------SWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYI 561
Query: 380 DVMGACAAMASLEMGTQLHCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
V+ AC+ ++ G + H +M+ GL + ++D+ + G + A + N M
Sbjct: 562 AVLSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMP 620
Query: 438 -DPDVVSWSSLI 448
D + W +L+
Sbjct: 621 CQVDALVWKTLL 632
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM-GTQLHCYIMKTGL-ALDVFVMN 414
E RLF L P+ T AC A + G + + K G DV V
Sbjct: 134 AEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGC 193
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
L+DM+ K G L + R +F+ + + VV W+ LI YAQ G +EA++LF M +G +P
Sbjct: 194 ALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQP 253
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGR--- 527
+ TL +L+AC+ +G G QL+ + + E SCV VD+ A++
Sbjct: 254 DQYTLSSMLSACTELGSFRLGQQLHSL-----ALRLGLESDSCVSCGLVDMYAKSHNGQS 308
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+H A + N+M +++ W +LL+ G+ D
Sbjct: 309 LHNAREVFNRMP-KHNVMAWTALLSGYVQRGSQD 341
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 320/643 (49%), Gaps = 74/643 (11%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
A+ C + A D+ R+ D W + ++ + Y AL + + N P
Sbjct: 67 AYGKCGSVASARAAFDAIARKNDYSWG-SMLTAYAQNGHYRAALDLYKRMDLQPN----P 121
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSK-CQPDAVLHNHILNMYGKCGSLEDARMVFD 139
Y ++ AC+S+++L+ G+ +H I +K + D +L N +L MY KCGSLEDA+ +F+
Sbjct: 122 VVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFE 181
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M R+V SW AMIA +Q+G AI LY M + P TF S++ ACS L +
Sbjct: 182 RMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQ 238
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR++HA + L QNAL+ MY + + DA +F + R+D+ S
Sbjct: 239 GRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVS---------- 288
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
W+ +IA A +EA+ +S+M + P+ T S+L A
Sbjct: 289 ------------------WSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLA 330
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR--------LF 363
C S L G +H I+ G+ + A++ +A LF L+
Sbjct: 331 CASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLW 390
Query: 364 SLMLASQTKPDH---------------------ITFNDVMGACAAMASLEMGTQLHCYIM 402
++++ +K H I ++ V+ ACA++ + Q H I
Sbjct: 391 TVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIE 450
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
G+ D + L++MY + G+L SAR++F+ M D ++W++LI GYA+ G AL
Sbjct: 451 ADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALG 510
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
L++ M G P+ +T + VL ACSH GL E+G QL+ +Q++Y + P SC++DLL
Sbjct: 511 LYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLL 570
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
+RAGR+ +AE+ IN M + + V W SLL + + H +V AA I K+DP + A+ V
Sbjct: 571 SRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYV 630
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL N++A +G +A + +M RGV+K G SWIE+ +IH
Sbjct: 631 LLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIH 673
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 246/544 (45%), Gaps = 81/544 (14%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPST-YADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
K++L + F + R S Y D + C L S+ R++HD I S +
Sbjct: 2 KRSLAPAKVRRFQLKEEKAGSRFDSSGHYRDALRQCQDLESV---RQIHDRI-SGAASAN 57
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
L N I+ YGKCGS+ AR FD + ++N SW +M+ +QNG AA++LY +M
Sbjct: 58 VFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM-- 115
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL--ISQNALIAMYTKFDRI 232
L P+ + +++ AC+ + + G+ +H+ I G L I +N+L+ MY K +
Sbjct: 116 -DLQPNPVVYTTVLGACASIKALEEGKAIHSR-ISGTKGLKLDVILENSLLTMYAKCGSL 173
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
DA +F ++ + ++S WN +IA A +
Sbjct: 174 EDAKRLFERMSGRSVSS----------------------------WNAMIAAYAQSGHFE 205
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
EA+ L+ +M ++ P T S+L AC++ L QG +IH+ I +G ++ + NA+L
Sbjct: 206 EAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALL 262
Query: 353 QHQA------------------------------------GELFRLFSLMLASQTKPDHI 376
A E +S M +P++
Sbjct: 263 TMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYY 322
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
TF V+ ACA++ L G +H I+ G + + L+D+Y GSL AR LF+ +
Sbjct: 323 TFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI 382
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP-NHVTLVGVLTACSHVGLVEEG 495
E+ D W+ LI GY++ G L+L+R M+++ P + V++AC+ +G +
Sbjct: 383 ENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADA 442
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
Q + ++ + G+I + +V++ +R G + A ++M+ D + W +L+A
Sbjct: 443 RQAHSDIEAD-GMISDFVLATSLVNMYSRWGNLESARQVFDKMS-SRDTLAWTTLIAGYA 500
Query: 556 THGN 559
HG
Sbjct: 501 KHGE 504
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 209/647 (32%), Positives = 326/647 (50%), Gaps = 80/647 (12%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYAD 85
L +A + DS +R W L + N + EA F + + I P + A
Sbjct: 148 LSEARTLFDSMFQRTAVTWTM-LIGGYAQNNQFREAFGLFIEMGRHG---IDPDHVSLAT 203
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+S + S+ R+VH H++ V+ N +L+ Y K SL A +F+++P+R+
Sbjct: 204 LLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERD 263
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V++ A++ G S+ G AI L+ +M + G P +FTF +I+ A L + G+Q+H
Sbjct: 264 SVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHG 323
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
V+K ++ NAL+ Y+K DR+++A SKL
Sbjct: 324 FVVKCNFVWNVFVANALLDFYSKHDRVVEA----------------------SKL----- 356
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG----DRELIPDGLTVRSLLCACT 321
F EM + S+N ++ A E++ LF E+ DR P +LL
Sbjct: 357 -FYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFP----FATLLSIAA 411
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKP--- 373
L+L G QIHS I S + V N+++ A GE R+FS + + P
Sbjct: 412 ISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTA 471
Query: 374 ----------------------------DHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
D T+ ++ ACA++ASL +G QLH +I+ +G
Sbjct: 472 MISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSG 531
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+VF + L+DMY KCGS+ A ++F M + VSW++LI YAQ G G+ L+LF
Sbjct: 532 YISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFE 591
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M SG++P+ V+L+ +L ACSH GLVEEGLQ + M Y ++P +E + +D+L R
Sbjct: 592 EMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRG 651
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA-LVLL 584
GR EAE + QM F+ D ++W S+L SC H N ++ K+AA + + AA V +
Sbjct: 652 GRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTM 711
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGND 630
NIYA++G+W+ V ++ +M+ERGV+KVP SW+EI+ K H + ND
Sbjct: 712 SNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTAND 758
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/575 (24%), Positives = 250/575 (43%), Gaps = 104/575 (18%)
Query: 85 DLISACS-SLRSLQLGRKVHDH----ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
++I C+ +L + K H H I+ + P+ N ++ + + G L AR +FD
Sbjct: 66 NIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFD 125
Query: 140 EMPQRNV-------------------------------VSWTAMIAGCSQNGQENAAIEL 168
EMP +N+ V+WT +I G +QN Q A L
Sbjct: 126 EMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGL 185
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+++M + G+ PD + +++ + V RQ+H+HVIK + S L+ N+L+ Y K
Sbjct: 186 FIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCK 245
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ A+ +F+ I +D ++ +++ G+SK F R
Sbjct: 246 TRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNR------------------------ 281
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
EA++LF +M + P T ++L A + G Q+H +++K F NV V
Sbjct: 282 ----EAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVA 337
Query: 349 NAIL----QH----QAGELF----------------------------RLFSLMLASQTK 372
NA+L +H +A +LF LF + +
Sbjct: 338 NALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFD 397
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+ F ++ A +L++G Q+H + T ++ V N L+DMY KCG G A +
Sbjct: 398 RRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRI 457
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ + V W+++I Y Q G E+ LKLF M+ + + + T ++ AC+ + +
Sbjct: 458 FSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASL 517
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G QL+ + G I S +VD+ A+ G + +A +M + V W +L++
Sbjct: 518 TLGKQLHSHIIGS-GYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNS-VSWNALIS 575
Query: 553 SCKTHGNVDVGKRAAENILK--IDPTNSAALVLLC 585
+ +G+ D R E +++ + P + + L +LC
Sbjct: 576 AYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILC 610
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/531 (33%), Positives = 292/531 (54%), Gaps = 42/531 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + N++ W M+ G + + + +E+YV+M+ G +P+ +TF ++++C+
Sbjct: 39 VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKT 98
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
GRQ+HA V+K + +LI+MY + R+ DA VF +++D+ S ++I G
Sbjct: 99 FEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITG 158
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ + AR VF+ + ++ SWN +I G EA+ LF EM + PD T+
Sbjct: 159 YASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTL 218
Query: 314 RSLLCACTSPLSLYQGMQIHSYII-KKGFYSNVPVCNAI--LQHQAG------------- 357
S+L AC S+ G +IH+ + GF S++ + NA L + G
Sbjct: 219 VSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLS 278
Query: 358 ---------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
E LF ML S P+ +T V+ ACA + ++++G
Sbjct: 279 CKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRW 338
Query: 397 LHCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+H YI K G+ + L+DMY KCG + +A ++FN M + SW+++I G+A
Sbjct: 339 IHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMH 398
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G A LF RMR +G+ P+ +TLVG+L+ACSH GL++ G +++ + +Y I P E
Sbjct: 399 GRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEH 458
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
C++DLL AG EAE+ I+ M + D V+W SLL +CK HGN+++ + A+ +++I+
Sbjct: 459 YGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIE 518
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
P NS + VLL NIYA++G+WE+VAR+ + +G++KVPG S IEI + +H
Sbjct: 519 PENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVH 569
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 190/412 (46%), Gaps = 46/412 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+ +C+ ++ + GR++H ++ C+ D H +++MY + G LEDAR VFD
Sbjct: 85 TFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXS 144
Query: 142 PQRNVVS-------------------------------WTAMIAGCSQNGQENAAIELYV 170
QR+VVS W AMI G +N A+EL+
Sbjct: 145 SQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFK 204
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH--GSHLISQNALIAMYTK 228
+M+++ + PD+ T S++ AC+ + LGR++H ++ H GS L NA I +Y+K
Sbjct: 205 EMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT-LVDDHHGFGSSLKIVNAFIGLYSK 263
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTI 281
+ A +F ++ KD+ SW ++I G++ ++ A +F EM ESPN + ++
Sbjct: 264 CGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSV 323
Query: 282 IAGVASCSNANEAMSLFSEMGDR-ELIPDGLTVR-SLLCACTSPLSLYQGMQIHSYIIKK 339
+ A + + + R + + +G +R SL+ + Q+ + ++ K
Sbjct: 324 LPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHK 383
Query: 340 GFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
S N + + +A F LFS M + +PD IT ++ AC+ L++G +
Sbjct: 384 SLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIF 443
Query: 399 CYIMKTGLALDVFVMNGLM-DMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + G M D+ G A E+ + M +PD V W SL+
Sbjct: 444 KSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLL 495
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 170/389 (43%), Gaps = 57/389 (14%)
Query: 35 VDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
V S + FD I + D+ S + Y EAL F + TN R T ++S
Sbjct: 165 VRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR-TNVRPDEGTLVSVLS 223
Query: 89 ACSSLRSLQLGRKVHD-----HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
AC+ S++LGR++H H S + + N + +Y KCG +E A +F+ +
Sbjct: 224 ACAQSGSIELGREIHTLVDDHHGFGSSLK----IVNAFIGLYSKCGDVEIASGLFEGLSC 279
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++VVSW +I G + A+ L+ +ML+SG P+ T S++ AC+ L + +GR +
Sbjct: 280 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 339
Query: 204 HAHVIKS----EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
H ++ K +GS L + +LI MY K I A VF+S+ K ++SW +MI GF
Sbjct: 340 HVYIDKRLKGVTNGSAL--RTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGF-- 395
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A AN A LFS M + PD +T+ LL A
Sbjct: 396 --------------------------AMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSA 429
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPD 374
C+ L G I + + Y+ P C L AG ++ +PD
Sbjct: 430 CSHSGLLDLGRHIFKSVTQD--YNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPD 487
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ + ++ AC +LE+ +M+
Sbjct: 488 GVIWCSLLKACKMHGNLELAESFAQKLME 516
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 38/305 (12%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +VF + PNL WNT++ G+AS S+ + ++ M +P+ T L
Sbjct: 30 FDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFL 89
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHI 376
L +C + +G QIH+ ++K G + D
Sbjct: 90 LKSCAKSKTFEEGRQIHAQVMKLG------------------------------CELDRY 119
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
++ A LE + + DV L+ Y G + SAR++F+ +
Sbjct: 120 AHTSLISMYARNGRLEDARK----VFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXI 175
Query: 437 EDPDVVSWSSLIVGYAQFGCG-EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+ DVVSW+++I GY + CG EEAL+LF+ M + VRP+ TLV VL+AC+ G +E G
Sbjct: 176 TERDVVSWNAMITGYVE-NCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELG 234
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+++ ++ + +G + + + + L ++ G V A ++ D+V W +L+
Sbjct: 235 REIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSC-KDVVSWNTLIGG-Y 292
Query: 556 THGNV 560
TH N+
Sbjct: 293 THMNL 297
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 10/221 (4%)
Query: 398 HCYIMKTGLALDVFVMNGLMDMYV---KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
H ++KTGL + ++ L+++ V L A +F ++P+++ W++++ G A
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRE 513
L+++ RM S G PN T +L +C+ EEG Q++ ++M+ G R
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMK--LGCELDRY 119
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+ ++ + AR GR+ +A + + D+V +L+ + G+V ++ + I +
Sbjct: 120 AHTSLISMYARNGRLEDARKVFDXSS-QRDVVSCTALITGYASRGDVRSARKVFDXITER 178
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
D + A++ Y + +EE L M VR G
Sbjct: 179 DVVSWNAMI---TGYVENCGYEEALELFKEMMRTNVRPDEG 216
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 296/567 (52%), Gaps = 64/567 (11%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L+ GR++H ++++ Q + ++N+Y KC +EDA +F+ MPQR++VSW ++AG
Sbjct: 158 LRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAG 217
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+QNG A+++ +QM ++G PD T S++ A + L + +GR +H + ++
Sbjct: 218 YAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYM 277
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ A++ Y K + A R VF M S N+
Sbjct: 278 VNVATAMLDTYFKCGSVRSA----------------------------RLVFKGMSSRNV 309
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWNT+I G A + EA + F +M D + P +++ L AC + L +G +H
Sbjct: 310 VSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRL 369
Query: 336 IIKKGFYSNVPVCNAI-------------------LQHQA-----------------GEL 359
+ +K +V V N++ L+H+ E
Sbjct: 370 LDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEA 429
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
LF M + KPD T V+ A A ++ +H ++T + +VFV L+D
Sbjct: 430 LNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDT 489
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
+ KCG++ +AR+LF+ M++ V++W+++I GY G G EAL LF M++ V+PN +T
Sbjct: 490 HAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITF 549
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+ V+ ACSH GLVEEG+ + M+ YG+ PT + +VDLL RAGR+ +A FI M
Sbjct: 550 LSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMP 609
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
I V ++L +C+ H NV++G++ A+ + +DP + VLL N+YAS+ W++VAR
Sbjct: 610 VKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVAR 669
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ +M+++G++K PG S +E++ ++H
Sbjct: 670 VRTAMEKKGIQKTPGCSLVELRNEVHT 696
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 133/568 (23%), Positives = 251/568 (44%), Gaps = 86/568 (15%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+ C+SL+ L ++ I+ + + + +++++ K S+ +A VF+ +
Sbjct: 48 AILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEH 104
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ V + M+ G ++N A+ Y +M +MP + F +++ + GR++
Sbjct: 105 KLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREI 164
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H VI + S+L + A++ +Y K +I DA+ +F + ++D+ SW +++ G+++ FA
Sbjct: 165 HGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFA 224
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
R A+ + +M + PD +T+ S+L A
Sbjct: 225 R----------------------------RAVQVVLQMQEAGQKPDSITLVSVLPAVADL 256
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------------------- 354
+L G IH Y + GF V V A+L
Sbjct: 257 KALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMI 316
Query: 355 -------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
++ E F F ML +P +++ + ACA + LE G +H + + +
Sbjct: 317 DGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIG 376
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
DV VMN L+ MY KC + A +F ++ VV+W+++I+GYAQ GC EAL LF M
Sbjct: 377 FDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEM 436
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEE-----GLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+S ++P+ TLV V+TA + + + + GL + +M + + ++D
Sbjct: 437 QSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC------TALIDTH 490
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNS 578
A+ G + A + M + ++ W +++ T+G+ +D+ +K +
Sbjct: 491 AKCGAIQTARKLFDLMQ-ERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITF 549
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKE 606
+++ C + SG EE SMKE
Sbjct: 550 LSVIAAC---SHSGLVEEGMYYFESMKE 574
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 35/315 (11%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ AC++L L+ GR VH + K D + N +++MY KC ++ A VF + + V
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
V+W AMI G +QNG N A+ L+ +M + PD FT S+I A + L + +H
Sbjct: 411 VTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGL 470
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
I++ ++ ALI + K I A +F + + + +W +MIDG+
Sbjct: 471 AIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGY--------- 521
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
+ + EA+ LF+EM + + P+ +T S++ AC+ +
Sbjct: 522 -------------------GTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLV 562
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAI-----LQHQAGELFRLFSLMLASQTKPDHITFNDV 381
+GM + + K Y P + L +AG L + + KP +
Sbjct: 563 EEGM--YYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAM 620
Query: 382 MGACAAMASLEMGTQ 396
+GAC ++E+G +
Sbjct: 621 LGACRIHKNVELGEK 635
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 16/241 (6%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C +D A V + + W+ + + NEAL F +Q++ I+P
Sbjct: 389 YSKCKRVDIAASVFGNLKHKTVVTWN-AMILGYAQNGCVNEALNLFCEMQSHD---IKPD 444
Query: 82 TYADLISACSSLRSLQLGRK---VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
++ L+S ++L L + R+ +H + + + + +++ + KCG+++ AR +F
Sbjct: 445 SFT-LVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLF 503
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCC 196
D M +R+V++W AMI G NG A++L+ +M + P++ TF S+I AC SGL
Sbjct: 504 DLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVE 563
Query: 197 VGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKD-ITSWGSM 253
G+ + +K +G + A++ + + R+ DAW + K IT G+M
Sbjct: 564 EGM---YYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAM 620
Query: 254 I 254
+
Sbjct: 621 L 621
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 195/648 (30%), Positives = 334/648 (51%), Gaps = 88/648 (13%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISAC 90
+V D R W+ L SSLC + AL AF + + + PS++ +++AC
Sbjct: 67 KVFDRISERNQVSWN-SLISSLCSFEKWEMALEAFRCMLDEN---VEPSSFTLVSVVTAC 122
Query: 91 SSL---RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S+L L +G++VH + L K + ++ + N ++ MYGK G L ++++ R++V
Sbjct: 123 SNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 181
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W +++ QN Q A+E +M+ G+ PD+FT S++ ACS L + G++LHA+
Sbjct: 182 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 241
Query: 208 IKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+K+ + +AL+ MY ++L R V
Sbjct: 242 LKNGSLDENSFVGSALVDMYCNCKQVLSG----------------------------RRV 273
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLCACTSPLS 325
F+ M + WN +IAG + + EA+ LF M + L+ + T+ ++ AC +
Sbjct: 274 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 333
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------------- 352
+ IH +++K+G + V N ++
Sbjct: 334 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 393
Query: 353 ----QHQAGELFRLFSLMLASQT----------KPDHITFNDVMGACAAMASLEMGTQLH 398
+H L L + + KP+ IT ++ +CAA+++L G ++H
Sbjct: 394 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 453
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
Y +K LA DV V + L+DMY KCG L +R++F+ + +V++W+ +I+ Y G G+
Sbjct: 454 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 513
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA+ L R M GV+PN VT + V ACSH G+V+EGL+++ +M+ +YG+ P+ + +CV
Sbjct: 514 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 573
Query: 519 VDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
VDLL RAGR+ EA +N M D + W SLL + + H N+++G+ AA+N+++++P
Sbjct: 574 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 633
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ VLL NIY+S+G W++ + +MKE+GVRK PG SWIE ++H
Sbjct: 634 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 681
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 243/540 (45%), Gaps = 92/540 (17%)
Query: 78 IRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDA 134
I+P YA L+ A + L+ ++LG+++H H+ D+V + N ++N+Y KCG
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
VFD + +RN VSW ++I+ + A+E + ML + P FT S++ ACS L
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 195 CC---VGLGRQLHAHVI-KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
+ +G+Q+HA+ + K E S +I N L+AMY K ++ + + S +D
Sbjct: 126 PMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLASSKVLLGSFGGRD---- 179
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
L +WNT+++ + EA+ EM + PD
Sbjct: 180 ------------------------LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 215
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKG------------------------------ 340
T+ S+L AC+ L G ++H+Y +K G
Sbjct: 216 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 275
Query: 341 --FYSNVPVCNAIL------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
F + + NA++ +H L + ++ + T V+ AC +
Sbjct: 276 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 335
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+H +++K GL D FV N LMDMY + G + A +F MED D+V+W+++I GY
Sbjct: 336 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 395
Query: 453 QFGCGEEALKLFRRMR------SSG-----VRPNHVTLVGVLTACSHVGLVEEGLQL--Y 499
E+AL L +M+ S G ++PN +TL+ +L +C+ + + +G ++ Y
Sbjct: 396 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 455
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
I N + S +VD+ A+ G + + +Q+ +++ W ++ + HGN
Sbjct: 456 AIKNNLATDVAV---GSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 188/433 (43%), Gaps = 93/433 (21%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS-QNALIAMYTKFD 230
M+ G+ PD + F ++++A + L + LG+Q+HAHV K +G ++ N L+ +Y K
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ VF I+ ++ SW N++I+ + S
Sbjct: 61 DFGAVYKVFDRISERNQVSW----------------------------NSLISSLCSFEK 92
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTS---PLSLYQGMQIHSYIIKKG----FYS 343
A+ F M D + P T+ S++ AC++ P L G Q+H+Y ++KG F
Sbjct: 93 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII 152
Query: 344 NVPVC--------------------------NAIL-----QHQAGELFRLFSLMLASQTK 372
N V N +L Q E M+ +
Sbjct: 153 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 212
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLGSARE 431
PD T + V+ AC+ + L G +LH Y +K G L + FV + L+DMY C + S R
Sbjct: 213 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 272
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVG 490
+F+ M D + W+++I GY+Q +EAL LF M S+G+ N T+ GV+ AC G
Sbjct: 273 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 332
Query: 491 -----------LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+V+ GL R +QN ++D+ +R G++ A +M
Sbjct: 333 AFSRKEAIHGFVVKRGLDRDRFVQN------------TLMDMYSRLGKIDIAMRIFGKME 380
Query: 540 FDDDIVVWKSLLA 552
D D+V W +++
Sbjct: 381 -DRDLVTWNTMIT 392
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/585 (30%), Positives = 299/585 (51%), Gaps = 76/585 (12%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF-DEMPQR 144
+ +C+ ++L G+++H +++ P ++NMY KCG + +A +VF D +R
Sbjct: 17 FLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHER 76
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NV ++ A+I+G NG + + Y +M G+MPD++TF ++R C C V +++H
Sbjct: 77 NVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTC---CEVMEVKKIH 133
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
++K + +AL+ Y K + DA VF ++ +D+
Sbjct: 134 GCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVL--------------- 178
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
WN +I G A +EA+ +F M + + P T+ +L S
Sbjct: 179 -------------WNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRG 225
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------------- 352
L G +H ++K G+ S V V NA++
Sbjct: 226 DLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIIS 285
Query: 353 -QHQAGE---LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
Q G+ RLF ML S PD +T V+ AC+ +A+L G ++H Y++ GL
Sbjct: 286 VHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGK 345
Query: 409 D--------VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
D + V N +MDMY KCGS+ +A ++F+ M DV SW+ +I+GY G EA
Sbjct: 346 DDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEA 405
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L +F +M + +PN VTLVGVL+AC+H G V G M++ +G+IPT E +CV+D
Sbjct: 406 LGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVID 465
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
+L RAG + +A + + +M + VVW++LL +C+ HGN ++ + AA +L+++P + +
Sbjct: 466 MLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGS 525
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ N+Y G++EEV + +MKE+ V+K PG SWIE++ +H
Sbjct: 526 YVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVH 570
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 156/334 (46%), Gaps = 51/334 (15%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ PS T ++S +S L G+ VH ++ + N +++MYGKC + DA
Sbjct: 207 VAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDAL 266
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
++F+ + ++++ SW ++I+ Q G + + L+ +ML SG++PD T +++ ACS L
Sbjct: 267 IIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLA 326
Query: 196 CVGLGRQLHAHVI------KSEHGS--HLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+ GR++H ++I E+G+ +L+ NA++ MY K + +A +F S+++KD+
Sbjct: 327 ALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDV 386
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
SW MI G+ +A EA+ +FS+M + E
Sbjct: 387 ASWNIMIMGYGMHGYAL----------------------------EALGMFSQMCEAEFK 418
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGEL 359
P+ +T+ +L AC + G H + S V I + +AG L
Sbjct: 419 PNEVTLVGVLSACN-----HAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHL 473
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+ ++ + + + + ++GAC + E+
Sbjct: 474 EDAYEIVQKMPIQANPVVWRALLGACRLHGNAEL 507
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 297/589 (50%), Gaps = 75/589 (12%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R ADL+ A + SL+ G ++H ++ D +L+N++++MY KCG L A VF
Sbjct: 3 RRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVF 62
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D MP+RNVVSWTA++ G +G+ + L+ +M SG P++FT + ++AC G G
Sbjct: 63 DGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAG 122
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
+ Q+H +++ H + N+L+ MY+K DA
Sbjct: 123 V--QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDA----------------------- 157
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-ELIPDGLTVRSLL 317
R VF+ + S NLA+WN++I+G A +++ +F EM R + PD T SLL
Sbjct: 158 -----RRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLL 212
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
AC+ + +G Q+H+ + +G P NAIL
Sbjct: 213 KACSGLGAAREGAQVHAAMAVRGVS---PASNAILAGALLDVYVKCHRLPVAMQVFDGLE 269
Query: 353 ----------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+ Q E LF +S + D + V+ A A +E G Q
Sbjct: 270 RRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQ 329
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+HCY KT LDV V N L+DMY+KCG G A F M +VVSW+++I G + G
Sbjct: 330 VHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGH 389
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G EA+ LF M+ GV + V + +L+ACSH GLV+E + + + + + P E +
Sbjct: 390 GREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYA 449
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL RAG + EA++ I M + + VW++LL++C+ H +V VG+ + +L +D
Sbjct: 450 CMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGD 509
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N V+L NI A +G+W E + G+M+ +G+RK G SW E+ ++H
Sbjct: 510 NPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVH 558
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 157/372 (42%), Gaps = 34/372 (9%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A V D R W+ + S ++L+ F +Q + + T+A L+ AC
Sbjct: 157 ARRVFDVIPSRNLATWN-SMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKAC 215
Query: 91 SSLRSLQLGRKVHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
S L + + G +VH + P +A+L +L++Y KC L A VFD + +RN +
Sbjct: 216 SGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQ 275
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WT +I G +Q GQ A+ L+ + SG+ D S++ + V G+Q+H +
Sbjct: 276 WTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTA 335
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
K+ G + N+L+ MY K +A F + +++ SW +MI+G K R
Sbjct: 336 KTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGR---- 391
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
EA+ LF EM + + D + +LL AC+ + +
Sbjct: 392 ------------------------EAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDE 427
Query: 329 GMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+ S I + C L +AGEL L+L+ +P + ++ AC
Sbjct: 428 CRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487
Query: 386 AAMASLEMGTQL 397
+ +G ++
Sbjct: 488 RVHKDVAVGREV 499
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 195/648 (30%), Positives = 334/648 (51%), Gaps = 88/648 (13%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISAC 90
+V D R W+ L SSLC + AL AF + + + PS++ +++AC
Sbjct: 154 KVFDRISERNQVSWN-SLISSLCSFEKWEMALEAFRCMLDEN---VEPSSFTLVSVVTAC 209
Query: 91 SSL---RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S+L L +G++VH + L K + ++ + N ++ MYGK G L ++++ R++V
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W +++ QN Q A+E +M+ G+ PD+FT S++ ACS L + G++LHA+
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 208 IKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+K+ + +AL+ MY ++L R V
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSG----------------------------RRV 360
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLCACTSPLS 325
F+ M + WN +IAG + + EA+ LF M + L+ + T+ ++ AC +
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------------- 352
+ IH +++K+G + V N ++
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 353 ----QHQAGELFRLFSLMLASQT----------KPDHITFNDVMGACAAMASLEMGTQLH 398
+H L L + + KP+ IT ++ +CAA+++L G ++H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
Y +K LA DV V + L+DMY KCG L +R++F+ + +V++W+ +I+ Y G G+
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA+ L R M GV+PN VT + V ACSH G+V+EGL+++ +M+ +YG+ P+ + +CV
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 519 VDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
VDLL RAGR+ EA +N M D + W SLL + + H N+++G+ AA+N+++++P
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ VLL NIY+S+G W++ + +MKE+GVRK PG SWIE ++H
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 768
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/572 (25%), Positives = 256/572 (44%), Gaps = 95/572 (16%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVH 103
W DL S + NL EA++ + + I+P YA L+ A + L+ ++LG+++H
Sbjct: 64 WWIDLLRSKVRSNLLREAVLTY---VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIH 120
Query: 104 DHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H+ D+V + N ++N+Y KCG VFD + +RN VSW ++I+ +
Sbjct: 121 AHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 180
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC---VGLGRQLHAHVI-KSEHGSHLIS 218
A+E + ML + P FT S++ ACS L + +G+Q+HA+ + K E S +I
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII- 239
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N L+AMY K ++ + + S +D L +W
Sbjct: 240 -NTLVAMYGKLGKLASSKVLLGSFGGRD----------------------------LVTW 270
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
NT+++ + EA+ EM + PD T+ S+L AC+ L G ++H+Y +K
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 339 KG--------------------------------FYSNVPVCNAIL------QHQAGELF 360
G F + + NA++ +H L
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
+ ++ + T V+ AC + +H +++K GL D FV N LMDMY
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR------SSG--- 471
+ G + A +F MED D+V+W+++I GY E+AL L +M+ S G
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 472 --VRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAGR 527
++PN +TL+ +L +C+ + + +G ++ Y I N + S +VD+ A+ G
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV---GSALVDMYAKCGC 567
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ + +Q+ +++ W ++ + HGN
Sbjct: 568 LQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 301/609 (49%), Gaps = 71/609 (11%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
++ LY++A+ F + + + P TY + A L+S++LG VH IL S
Sbjct: 92 REGLYHDAISVFIRMVSE-GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR 150
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D + N +L MY G +E AR VFD M R+V+SW MI+G +NG N A+ ++ M+
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ D T S++ C L + +GR +H V + G + +NAL+ MY K R
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR-- 268
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+D AR VF+ ME ++ +W +I G +
Sbjct: 269 --------------------------MDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 302
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
A+ L M + P+ +T+ SL+ C L + G +H + +++ YS++ + +++
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 354 HQA------------------------------------GELFRLFSLMLASQTKPDHIT 377
A + LF M +P+ T
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
N ++ A AA+A L +HCY+ KTG + GL+ +Y KCG+L SA ++FN ++
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 438 DP----DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ DVV W +LI GY G G AL++F M SGV PN +T L ACSH GLVE
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 542
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
EGL L+R M Y + +C+VDLL RAGR+ EA + I + F+ VW +LLA+
Sbjct: 543 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C TH NV +G+ AA + +++P N+ VLL NIYA+ G+W+++ ++ M+ G+RK P
Sbjct: 603 CVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKP 662
Query: 614 GQSWIEIQT 622
G S IEI++
Sbjct: 663 GHSTIEIRS 671
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ ++ AA S+ LHC+++ TG + +++ L Y CG + AR+LF M
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR--PNHVTLVGVLTACSHVGLVEEG 495
++S++ +I Y + G +A+ +F RM S GV+ P+ T V A + ++ G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 496 LQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
L ++ RI+++ +G + ++ ++ + G+V A D + M + D++ W ++++
Sbjct: 137 LVVHGRILRSWFG--RDKYVQNALLAMYMNFGKVEMARDVFDVMK-NRDVISWNTMISGY 193
Query: 555 KTHG 558
+G
Sbjct: 194 YRNG 197
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 195/648 (30%), Positives = 334/648 (51%), Gaps = 88/648 (13%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISAC 90
+V D R W+ L SSLC + AL AF + + + PS++ +++AC
Sbjct: 154 KVFDRISERNQVSWN-SLISSLCSFEKWEMALEAFRCMLDEN---VEPSSFTLVSVVTAC 209
Query: 91 SSL---RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S+L L +G++VH + L K + ++ + N ++ MYGK G L ++++ R++V
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W +++ QN Q A+E +M+ G+ PD+FT S++ ACS L + G++LHA+
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 208 IKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+K+ + +AL+ MY ++L R V
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSG----------------------------RRV 360
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLCACTSPLS 325
F+ M + WN +IAG + + EA+ LF M + L+ + T+ ++ AC +
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------------- 352
+ IH +++K+G + V N ++
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 353 ----QHQAGELFRLFSLMLASQT----------KPDHITFNDVMGACAAMASLEMGTQLH 398
+H L L + + KP+ IT ++ +CAA+++L G ++H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
Y +K LA DV V + L+DMY KCG L +R++F+ + +V++W+ +I+ Y G G+
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA+ L R M GV+PN VT + V ACSH G+V+EGL+++ +M+ +YG+ P+ + +CV
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 519 VDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
VDLL RAGR+ EA +N M D + W SLL + + H N+++G+ AA+N+++++P
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ VLL NIY+S+G W++ + +MKE+GVRK PG SWIE ++H
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 768
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 146/572 (25%), Positives = 256/572 (44%), Gaps = 95/572 (16%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVH 103
W DL S + NL EA++ + + I+P YA L+ A + L+ ++LG+++H
Sbjct: 64 WWIDLLRSKVRSNLLREAVLTY---VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIH 120
Query: 104 DHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H+ D+V + N ++N+Y KCG VFD + +RN VSW ++I+ +
Sbjct: 121 AHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 180
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC---VGLGRQLHAHVI-KSEHGSHLIS 218
A+E + ML + P FT S++ ACS L + +G+Q+HA+ + K E S +I
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII- 239
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N L+AMY K ++ + + S +D L +W
Sbjct: 240 -NTLVAMYGKLGKLASSKVLLGSFGGRD----------------------------LVTW 270
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
NT+++ + EA+ EM + PD T+ S+L AC+ L G ++H+Y +K
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 339 KG--------------------------------FYSNVPVCNAIL------QHQAGELF 360
G F + + NA++ +H L
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
+ ++ + T V+ AC + +H +++K GL D FV N LMDMY
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR------SSG--- 471
+ G + A +F MED D+V+W+++I GY E+AL L +M+ S G
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 472 --VRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAGR 527
++PN +TL+ +L +C+ + + +G ++ Y I N + S +VD+ A+ G
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV---GSALVDMYAKCGC 567
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ + +Q+ +++ W ++ + HGN
Sbjct: 568 LQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 186/586 (31%), Positives = 291/586 (49%), Gaps = 67/586 (11%)
Query: 78 IRPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP Y ++ + L S++ G VH + + N ++ Y K +DA
Sbjct: 192 VRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAI 251
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+VFD MP R+V+SW +MI+GC+ NG + AIEL+V+M G D T S++ AC+ L
Sbjct: 252 LVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELH 311
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ LGR +H + +K+ S N L+ MY+ + + W S
Sbjct: 312 LLFLGRVVHGYSVKTGFISQTSLANVLLDMYS------------------NCSDWRS--- 350
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+F M N+ SW +I ++ LF EMG PD + S
Sbjct: 351 -------TNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITS 403
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------- 353
L A L G +H Y I+ G + V NA+++
Sbjct: 404 ALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKD 463
Query: 354 --------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ A E F LF+ ML Q +P+ +T ++ A A+++SLE G ++H
Sbjct: 464 MISWNTLIGGYSRNNLANEAFSLFTEMLL-QLRPNAVTMTCILPAAASLSSLERGREMHA 522
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
Y ++ G D FV N L+DMYVKCG+L AR LF+ + + +++SW+ ++ GY G G +
Sbjct: 523 YALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRD 582
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
A+ LF +MR SG+ P+ + +L ACSH GL +EG + + M+ E+ I P + +C+V
Sbjct: 583 AIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMV 642
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DLL G + EA +FI+ M + D +W SLL C+ H NV + + AE + +++P N+
Sbjct: 643 DLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTG 702
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL NIYA + +WE V +L + RG+R+ G SWIE + K+H
Sbjct: 703 YYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVH 748
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 237/517 (45%), Gaps = 71/517 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDA---VLHNHILNMYGKCGSLEDARMVF 138
+Y ++ CS +RSL+ G++ H + +S D VL ++ MY KCG LE+AR VF
Sbjct: 93 SYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVF 152
Query: 139 DEMPQ-RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
DEMPQ +V WTA+++G ++ G + L+ +M G+ PD +T +++ +GL +
Sbjct: 153 DEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSI 212
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G +H + K GS NAL+A Y K +R DA VF + +D+ SW SM
Sbjct: 213 EDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSM---- 268
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
I+G S ++A+ LF M D T+ S+L
Sbjct: 269 ------------------------ISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVL 304
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR-------- 361
AC L+ G +H Y +K GF S + N +L ++FR
Sbjct: 305 PACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVV 364
Query: 362 --------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
LF M T+PD + A A L+ G +H Y
Sbjct: 365 SWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYA 424
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ G+ + V N LM+MYVKCG++ A+ +F+ + D++SW++LI GY++ EA
Sbjct: 425 IRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAF 484
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF M +RPN VT+ +L A + + +E G +++ G + + ++D+
Sbjct: 485 SLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRR-GYLEDDFVANALIDM 542
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + A ++++ + +++ W ++A HG
Sbjct: 543 YVKCGALLLARRLFDRLS-NKNLISWTIMVAGYGMHG 578
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 102/192 (53%), Gaps = 6/192 (3%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA---LDVFVMNGLMDMYVKCGSLGSAR 430
D ++ V+ C+ + SLE G + H + + L +D + L+ MY+KCG L +AR
Sbjct: 90 DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENAR 149
Query: 431 ELFNFMED-PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+F+ M DV W++L+ GYA+ G E + LFR+M GVRP+ T+ VL + +
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
G +E+G ++ +++ + G + ++ A++ R +A + M D++ W S
Sbjct: 210 GSIEDGEVVHGLLE-KLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPH-RDVISWNS 267
Query: 550 LLASCKTHGNVD 561
+++ C ++G D
Sbjct: 268 MISGCTSNGLYD 279
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 343 SNVPVCNAILQ--HQAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
S+V V A++ +AG+L LF M +PD T + V+ A + S+E G +
Sbjct: 159 SDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVV 218
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H + K G V N LM Y K A +F+ M DV+SW+S+I G G
Sbjct: 219 HGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLY 278
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPTRER 514
++A++LF RM G + TL+ VL AC+ + L L L R++ + G I
Sbjct: 279 DKAIELFVRMWLEGEELDSATLLSVLPACAELHL----LFLGRVVHGYSVKTGFISQTSL 334
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ ++D+ + M ++V W +++ S G D
Sbjct: 335 ANVLLDMYSNCSDWRSTNKIFRNMV-QKNVVSWTAMITSYTRAGLYD 380
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 190/587 (32%), Positives = 303/587 (51%), Gaps = 103/587 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILS---SKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T +++S+C+ ++ +GRKVH ++ C P A N +LNMYGKCG E A VF
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA---NSVLNMYGKCGDSETATTVF 222
Query: 139 DEMP-------------------------------QRNVVSWTAMIAGCSQNGQENAAIE 167
+ MP R++VSW AMIAG +QNG + A++
Sbjct: 223 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 282
Query: 168 LYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
L+ +ML +S + PD+FT S++ AC+ L V +G+Q+HA+++++E + NALI+ Y
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 342
Query: 227 TKFDRILDAWNVFSSIARKD--ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
K + +A + D + S+ ++++G+ K+ +MES
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKI-------GDMES------------ 383
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
A +F M +R+++ + M + G+ N
Sbjct: 384 ---------AREMFGVMNNRDVVA------------------WTAMIV-------GYEQN 409
Query: 345 VPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ E LF M+ +P+ T V+ CA++A L+ G Q+HC +++
Sbjct: 410 ---------GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKL 463
L V N ++ MY + GS AR +F+ + + ++W+S+IV AQ G GEEA+ L
Sbjct: 461 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M +GV P+ +T VGVL+ACSH G V EG + Y ++NE+ I P +C+VDLLA
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG EA++FI +M + D + W SLL++C+ H N ++ + AAE +L IDP NS A
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
+ N+Y++ G+W + AR+ + KE+ VRK G SW I++KIH G D
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGAD 687
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 248/500 (49%), Gaps = 49/500 (9%)
Query: 64 LVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
L+A +L NN S Y + LR R++ D I ++ + N +L+
Sbjct: 57 LLASAYLCNNL-----LSYYGETAGGAGGLRD---ARRLFDEIPLAR--RNVFTWNSLLS 106
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
M+ K G L DAR VF EMP+R+ VSWT M+ G ++ G+ AI+ + M G P QFT
Sbjct: 107 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 166
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+++ +C+ +GR++H+ V+K GS + N+++ MY K A VF +
Sbjct: 167 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 226
Query: 244 RKDITSWGSMID---GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ ++SW +M+ ++D A ++F M ++ SWN +IAG +A+ LFS
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 286
Query: 301 M-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
M + + PD T+ S+L AC + ++ G Q+H+YI++ N V NA++ A
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS- 345
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
S+E ++ M+T L+V L++
Sbjct: 346 -----------------------------GSVENARRIMDQSMETD--LNVISFTALLEG 374
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
YVK G + SARE+F M + DVV+W+++IVGY Q G +EA+ LFR M + G PN TL
Sbjct: 375 YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTL 434
Query: 480 VGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
VL+ C+ + ++ G Q++ R +++ + + + ++ + AR+G A +Q+
Sbjct: 435 AAVLSVCASLACLDYGKQIHCRAIRSL--LEQSSSVSNAIITMYARSGSFPWARRMFDQV 492
Query: 539 AFDDDIVVWKSLLASCKTHG 558
+ + + W S++ + HG
Sbjct: 493 CWRKETITWTSMIVALAQHG 512
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 193/435 (44%), Gaps = 55/435 (12%)
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF----DRILDAWNVF 239
+ +++ C G GR +HA +K+ + N L++ Y + + DA +F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 240 SSI--ARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
I AR+++ +W S++ F+K L AR VF EM + SW ++ G+ EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+ +M P T+ ++L +C + G ++HS+++K G S VPV N++L
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL-- 206
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
++ G C ++ + + V N
Sbjct: 207 -------------------------NMYGKCG-------DSETATTVFERMPVRSVSSWN 234
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVR 473
++ + G + A LF M D +VSW+++I GY Q G +ALKLF RM S +
Sbjct: 235 AMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMA 294
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
P+ T+ VL+AC+++G V G Q++ I++ E + + ++ A++G V A
Sbjct: 295 PDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY--NSQVTNALISTYAKSGSVENAR 352
Query: 533 DFINQ-MAFDDDIVVWKSLLASCKTHGNVDVG--KRAAENILKIDPTNSAALVLLCNIYA 589
++Q M D +++ + +LL G V +G + A E ++ + A + Y
Sbjct: 353 RIMDQSMETDLNVISFTALL-----EGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 407
Query: 590 SSGKWEEVARLMGSM 604
+G+ +E L SM
Sbjct: 408 QNGRNDEAIDLFRSM 422
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 201/477 (42%), Gaps = 80/477 (16%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D A + +S R W+ + + + L +AL F + + ++ T ++
Sbjct: 246 MDLAESLFESMPDRSIVSWN-AMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVL 304
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE------- 140
SAC++L ++++G++VH +IL ++ ++ + N +++ Y K GS+E+AR + D+
Sbjct: 305 SACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLN 364
Query: 141 --------------------------MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
M R+VV+WTAMI G QNG+ + AI+L+ M+
Sbjct: 365 VISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMIT 424
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRI 232
G P+ +T +++ C+ L C+ G+Q+H I+S E S + NA+I MY +
Sbjct: 425 CGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV--SNAIITMYARSGSF 482
Query: 233 LDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
A +F + RK+ +W SM I +A
Sbjct: 483 PWARRMFDQVCWRKETITWTSM----------------------------IVALAQHGQG 514
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP----- 346
EA+ LF EM + PD +T +L AC+ + +G + + I K + P
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI--KNEHQIAPEMSHY 572
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
C L +AG + +PD I + ++ AC + E+ +L + +
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA-ELAAEKLLSID 631
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV-----VSWSSLIVGYAQFGCGE 458
+ + + ++Y CG A ++ ++ V SW+ + FG +
Sbjct: 632 PNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADD 688
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 322/635 (50%), Gaps = 61/635 (9%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
QA ++D RR ++ L + + E+L F + TYA ++A
Sbjct: 65 QARRLLDEMPRRNAVSFNL-LIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAA 123
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
CS L+ G+ VH + + N +++MY +CG + +AR VFD +R+ VSW
Sbjct: 124 CSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSW 183
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL--CCVGLGRQLHAHV 207
++++G + G + ++ M + + + F GS+I+ CSG G+ +H V
Sbjct: 184 NSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCV 243
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+K+ + L +A++ MY K + +A +F S+ ++ + +MI G + + A V
Sbjct: 244 VKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAA--VH 301
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
E+ EA+SL+SE+ R + P T S++ AC +
Sbjct: 302 KEV--------------------VREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIE 341
Query: 328 QGMQIHSYIIKKGF--------------------------YSNVPVCNAILQHQ------ 355
G QIH ++K F + +VP + +
Sbjct: 342 FGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCV 401
Query: 356 AGELFR----LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
ELF LF +L KPD T + VM ACA++A + G Q+ C+ K+G
Sbjct: 402 QNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTA 461
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
+ N + MY + G++ +A + F ME DVVSWS++I +AQ GC +AL+ F M +
Sbjct: 462 MGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAK 521
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
V PN +T +GVLTACSH GLV+EGL+ Y IM+ EYG+ PT + +CVVDLL RAGR+ +A
Sbjct: 522 VVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADA 581
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
E FI F D+ VVW+SLL SC+ H +++ G+ A+ I+++ P +S V L N+Y +
Sbjct: 582 EAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDA 641
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
G+ +++ MKERGV+K PG SWIE+++ IH+
Sbjct: 642 GELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHS 676
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 217/487 (44%), Gaps = 23/487 (4%)
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS--LEDARMVFDEMPQRNVVSW 149
S SL VH HI + P L N +L Y + G+ AR + DEMP+RN VS+
Sbjct: 22 SCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSF 81
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
+I S+ GQ ++E ++ ++ + D+FT+ + + ACS + G+ +HA +
Sbjct: 82 NLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAV 141
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART--- 265
+ N+L++MY + + +A VF +D SW S++ G+ ++
Sbjct: 142 LEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLR 201
Query: 266 VFNEMESPNLASWNTIIAG--VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VF M + N+ G + CS + ++ +E ++ GL L +
Sbjct: 202 VFALMRRCAMG-LNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVD 260
Query: 324 LSLYQGMQIHSY-IIKKGFYSNVPVCNAIL-----------QHQAGELFRLFSLMLASQT 371
+ +G + + K NV V NA++ + E L+S + +
Sbjct: 261 MYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGM 320
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+P TF+ V+ AC +E G Q+H ++K D F+ + L+D+Y +
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFR 380
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
F + DVV+W+++I G Q E AL LF + G++P+ T+ V+ AC+ + +
Sbjct: 381 CFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAV 440
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
V G Q+ + + G + + + AR+G V A +M D+V W +++
Sbjct: 441 VRTGEQM-QCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEME-SHDVVSWSAII 498
Query: 552 ASCKTHG 558
+S HG
Sbjct: 499 SSHAQHG 505
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 186/586 (31%), Positives = 310/586 (52%), Gaps = 45/586 (7%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N+ R +Y +IS L R + D + + D N +L Y + L
Sbjct: 70 NSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM----PERDLFSWNVMLTGYVRNRRLG 125
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+A +FD MP+++VVSW AM++G +QNG + A E++ +M + ++ ++ A
Sbjct: 126 EAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAY- 180
Query: 193 GLCCVGLGRQLHAH-VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
V GR A + +S+ LIS N L+ Y K + + DA +F + +D+ SW
Sbjct: 181 ----VHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWN 236
Query: 252 SMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG------ 302
+MI G+++ L A+ +FNE ++ +W +++G +EA F EM
Sbjct: 237 TMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEIS 296
Query: 303 ----------DRELIPDGLTVRSLLCACTSPLS-----------LYQGMQIHSYIIKKGF 341
++++ G ++ C S + + Q ++ + ++
Sbjct: 297 YNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDC 356
Query: 342 YSNVPVCNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
S + + Q+ E +F M + TF+ + CA +A+LE+G Q+H
Sbjct: 357 VSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQ 416
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++K G FV N L+ MY KCGS A ++F +E+ DVVSW+++I GYA+ G G +A
Sbjct: 417 VVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQA 476
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L LF M+ +GV+P+ +T+VGVL+ACSH GL++ G + + M +Y + PT + +C++D
Sbjct: 477 LVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMID 536
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL RAGR+ EAE+ + M FD W +LL + + HGN ++G++AAE + K++P NS
Sbjct: 537 LLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 596
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL N+YA+SG+W +V ++ M+E GV+KV G SW+E+Q KIH
Sbjct: 597 YVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHT 642
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 195/485 (40%), Gaps = 96/485 (19%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
PD V N ++ + + G + A VF+ MP+R+ VS+ AMI+G +N + + A +L+ +
Sbjct: 44 PDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK- 102
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
MP++ L S N ++ Y + R+
Sbjct: 103 -----MPER---------------------------------DLFSWNVMLTGYVRNRRL 124
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCS 289
+A +F + +KD+ SW +M+ G+++ +D AR VFN+M N SWN ++A
Sbjct: 125 GEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNG 184
Query: 290 NANEAMSLFSEMGDRELIP-----DGLTVRSLLCACTSPLSLYQGMQIHSYI-------- 336
EA LF + ELI G R++L L+ M + I
Sbjct: 185 RLKEARRLFESQSNWELISWNCLMGGYVKRNML---GDARQLFDRMPVRDVISWNTMISG 241
Query: 337 ------------------IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
I+ F V + E + F M + I++
Sbjct: 242 YAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK----NEISY 297
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
N ++ + + +L + ++ N ++ Y + G + AR+LF+ M
Sbjct: 298 NAMLAGYVQYKKMVIAGEL----FEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQ 353
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D VSW+++I GYAQ G EEAL +F M+ G N T L+ C+ + +E G Q+
Sbjct: 354 RDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQV 413
Query: 499 YRIMQNEYGIIPTRERRSCVV-----DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ ++ C V + + G EA D + + D+V W +++A
Sbjct: 414 HG------QVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIE-EKDVVSWNTMIAG 466
Query: 554 CKTHG 558
HG
Sbjct: 467 YARHG 471
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 113/208 (54%), Gaps = 5/208 (2%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + Y EAL F ++ + R ST++ +S C+ + +L+LG++VH ++ +
Sbjct: 362 IISGYAQNGHYEEALNMFVEMKRDGESSNR-STFSCALSTCADIAALELGKQVHGQVVKA 420
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N +L MY KCGS ++A VF+ + +++VVSW MIAG +++G A+ L+
Sbjct: 421 GFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLF 480
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN--ALIAMYT 227
M ++G+ PD+ T ++ ACS + G + + + + ++ S++ +I +
Sbjct: 481 ESMKKAGVKPDEITMVGVLSACSHSGLIDRGTE-YFYSMDRDYNVKPTSKHYTCMIDLLG 539
Query: 228 KFDRILDAWNVFSSIA-RKDITSWGSMI 254
+ R+ +A N+ ++ SWG+++
Sbjct: 540 RAGRLEEAENLMRNMPFDPGAASWGALL 567
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+DPD+V+W+ I + + G + AL++F M R S V N + G L
Sbjct: 42 KDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYN-AMISGYLRNAK-------- 92
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLA--RAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ + ++ + +P R+ S V L R R+ EA + M D+V W ++L+
Sbjct: 93 ---FSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMP-KKDVVSWNAMLSG 148
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+G VD A E K+ NS + L Y +G+ +E RL S
Sbjct: 149 YAQNGFVD---EAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFES 195
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 298/589 (50%), Gaps = 75/589 (12%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R ADL+ A + SL+ G ++H ++ D +L+N++++MY KCG L A VF
Sbjct: 199 RRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVF 258
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D MP+RNVVSWTA++ G +G+ + L+ +M SG P++FT + ++AC G G
Sbjct: 259 DGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAG 318
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
+ Q+H +++ H + N+L+ MY+K DA
Sbjct: 319 V--QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDA----------------------- 353
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-ELIPDGLTVRSLL 317
R VF+ + S NLA+WN++I+G A +++ +F EM R + PD T SLL
Sbjct: 354 -----RRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLL 408
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
AC+ + +G Q+H+ + +G P NAIL
Sbjct: 409 KACSGLGAAREGAQVHAAMAVRGVS---PASNAILAGALLDVYVKCHRLPVAMQVFDGLE 465
Query: 353 ----------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+ Q E LF +S + D + V+ A A +E G Q
Sbjct: 466 RRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQ 525
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+HCY KT LDV V N L+DMY+KCG G A F M +VVSW+++I G + G
Sbjct: 526 VHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGH 585
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G EA+ LF M++ GV + V + +L+ACSH GLV+E + + + + + P E +
Sbjct: 586 GREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYA 645
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL RAG + EA++ I M + + VW++LL++C+ H +V VG+ + +L +D
Sbjct: 646 CMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGD 705
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N V+L NI A +G+W E + G+M+ +G+RK G SW E+ ++H
Sbjct: 706 NPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVH 754
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 158/376 (42%), Gaps = 42/376 (11%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A V D R W+ + S ++L+ F +Q + + T+A L+ AC
Sbjct: 353 ARRVFDVIPSRNLATWN-SMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKAC 411
Query: 91 SSLRSLQLGRKVHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
S L + + G +VH + P +A+L +L++Y KC L A VFD + +RN +
Sbjct: 412 SGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQ 471
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WT +I G +Q GQ A+ L+ + SG+ D S++ + V G+Q+H +
Sbjct: 472 WTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTA 531
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
K+ G + N+L+ MY K +A F + +++ SW +MI+G K R
Sbjct: 532 KTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGR---- 587
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
EA+ LF EM + D + +LL AC+ + +
Sbjct: 588 ------------------------EAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDE 623
Query: 329 GMQIHSYII-------KKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
+ S I K Y+ C L +AGEL L+L+ +P + +
Sbjct: 624 CRRYFSRICQDRRMRPKAEHYA----CMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 679
Query: 382 MGACAAMASLEMGTQL 397
+ AC + +G ++
Sbjct: 680 LSACRVHKDVAVGREV 695
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 192/624 (30%), Positives = 319/624 (51%), Gaps = 71/624 (11%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRI--RPSTYADLIS--ACSSLRSLQLGR 100
+W+ L S C + + E L F + N ++ I RP Y+ I+ +C+ LR L LG+
Sbjct: 204 LWN-ALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGK 262
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
+H + + D + + ++++Y KCG + DA VF E P+ +VV WT++I+G Q+G
Sbjct: 263 VIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSG 322
Query: 161 QENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
A+ + +M+ S + PD T S+ AC+ L LGR +H V + + L
Sbjct: 323 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLA 382
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
N+L+ +Y K I +A N+F ++ KDI S W+
Sbjct: 383 NSLLHLYGKTGSIKNASNLFREMSDKDIIS----------------------------WS 414
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
T++A A + + LF+EM D+ + P+ +TV S+L AC +L +GM+IH +
Sbjct: 415 TMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNY 474
Query: 340 GFYSNVPVCNAILQ--------HQAGELFR----------------------------LF 363
GF V A++ +A +LF +F
Sbjct: 475 GFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVF 534
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
ML+S T+PD I ++ + + L+ LH +++K G + F+ L+++Y KC
Sbjct: 535 RNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKC 594
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGV 482
S+ A ++F M DVV+WSS+I Y G GEEALKLF +M + S +PN+VT + +
Sbjct: 595 SSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISI 654
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSH GL++EG+ ++ IM N+Y + P E + +VDLL R G + A D IN M
Sbjct: 655 LSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQA 714
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+W +LL +C+ H N+ +G+ AA+N+ +DP ++ +LL NIY+ W +L
Sbjct: 715 GPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRR 774
Query: 603 SMKERGVRKVPGQSWIEIQTKIHA 626
+KE+ + K+ GQS +E++ ++ +
Sbjct: 775 LVKEKRLNKIVGQSVVELKNEVRS 798
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+QLH +K GL D F++ L +Y + S+ A +LF V W++L+ Y
Sbjct: 156 SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFE 215
Query: 455 GCGEEALKLFRRMRS-SGV----RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
G E L LFR+M + S V RP++ ++ L +C+ + + G ++ ++ + I
Sbjct: 216 GEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLK-KVRID 274
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
S ++DL + G++++A + D+V+W S+++ + G+ ++
Sbjct: 275 GDMFVGSALIDLYTKCGQMNDAVKVFMEYP-KPDVVLWTSIISGYEQSGSPELA 327
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 191/587 (32%), Positives = 303/587 (51%), Gaps = 103/587 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILS---SKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T +++S+C+ ++ +GRKVH ++ C P A N +LNMYGKCG E A VF
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA---NSVLNMYGKCGDAETASTVF 222
Query: 139 DEMPQRNV-------------------------------VSWTAMIAGCSQNGQENAAIE 167
+ MP R+V VSW AMIAG +QNG + A++
Sbjct: 223 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALK 282
Query: 168 LYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
L+ +ML +S + PD+FT S++ AC+ L V +G+Q+HA+++++E + NALI+ Y
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 342
Query: 227 TKFDRILDAWNVFSSIARKD--ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
K + +A + D + S+ ++++G+ K+ +MES
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKI-------GDMES------------ 383
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
A +F M +R+++ + M + G+ N
Sbjct: 384 ---------AREMFGVMNNRDVVA------------------WTAMIV-------GYEQN 409
Query: 345 VPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ E LF M+ +P+ T V+ CA++A L+ G Q+HC +++
Sbjct: 410 ---------GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKL 463
L V N ++ MY + GS AR +F+ + + ++W+S+IV AQ G GEEA+ L
Sbjct: 461 LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M +GV P+ +T VGVL+ACSH G V EG + Y ++NE+ I P +C+VDLLA
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG EA++FI +M + D + W SLL++C+ H N ++ + AAE +L IDP NS A
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
+ N+Y++ G+W + AR+ + KE+ VRK G SW I++KIH G D
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGAD 687
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 149/503 (29%), Positives = 245/503 (48%), Gaps = 55/503 (10%)
Query: 64 LVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
L+A +L NN S Y + LR R++ D I ++ + N +L+
Sbjct: 57 LLASAYLCNNL-----LSYYGETAGGAGGLRD---ARRLFDEIPLAR--RNVFTWNSLLS 106
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
M+ K G L DAR VF EMP+R+ VSWT M+ G ++ G+ AI+ + M G P QFT
Sbjct: 107 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 166
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+++ +C+ +GR++H+ V+K GS + N+++ MY K A VF +
Sbjct: 167 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMP 226
Query: 244 RKDITSWGSMID---GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ ++SW +M+ ++D A ++F M ++ SWN +IAG +A+ LFS
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSR 286
Query: 301 M-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
M + + PD T+ S+L AC + ++ G Q+H+YI++ N V NA++ A
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS- 345
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
S+E ++ M+T L+V L++
Sbjct: 346 -----------------------------GSVENARRIMDQSMETD--LNVISFTALLEG 374
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
YVK G + SARE+F M + DVV+W+++IVGY Q G +EA+ LFR M + G PN TL
Sbjct: 375 YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTL 434
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVHEAEDFI 535
VL+ C+ + ++ G Q++ I ER S V + + AR+G A
Sbjct: 435 AAVLSVCASLACLDYGKQIH-----CRAIRSLLERSSSVSNAIITMYARSGSFPWARRMF 489
Query: 536 NQMAFDDDIVVWKSLLASCKTHG 558
+Q+ + + + W S++ + HG
Sbjct: 490 DQVCWRKETITWTSMIVALAQHG 512
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 201/477 (42%), Gaps = 80/477 (16%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D A + +S R W+ + + + L +AL F + + ++ T ++
Sbjct: 246 MDLAESLFESMPGRSIVSWN-AMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVL 304
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE------- 140
SAC++L ++++G++VH +IL ++ ++ + N +++ Y K GS+E+AR + D+
Sbjct: 305 SACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLN 364
Query: 141 --------------------------MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
M R+VV+WTAMI G QNG+ + AI+L+ M+
Sbjct: 365 VISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMIT 424
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRI 232
G P+ +T +++ C+ L C+ G+Q+H I+S E S + NA+I MY +
Sbjct: 425 CGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSV--SNAIITMYARSGSF 482
Query: 233 LDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
A +F + RK+ +W SM I +A
Sbjct: 483 PWARRMFDQVCWRKETITWTSM----------------------------IVALAQHGQG 514
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP----- 346
EA+ LF EM + PD +T +L AC+ + +G + + I K + P
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI--KNEHQIAPEMSHY 572
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
C L +AG + +PD I + ++ AC + E+ +L + +
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA-ELAAEKLLSID 631
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV-----VSWSSLIVGYAQFGCGE 458
+ + + ++Y CG A ++ ++ V SW+ + FG +
Sbjct: 632 PNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADD 688
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 191/435 (43%), Gaps = 55/435 (12%)
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF----DRILDAWNVF 239
+ +++ C G GR +HA +K+ + N L++ Y + + DA +F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 240 SSI--ARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
I AR+++ +W S++ F+K L AR VF EM + SW ++ G+ EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+ +M P T+ ++L +C + G ++HS+++K G S VPV N++L
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL-- 206
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
++ G C + + + V N
Sbjct: 207 -------------------------NMYGKCG-------DAETASTVFERMPVRSVSSWN 234
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVR 473
++ + G + A LF M +VSW+++I GY Q G +ALKLF RM S +
Sbjct: 235 AMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMA 294
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
P+ T+ VL+AC+++G V G Q++ I++ E + + ++ A++G V A
Sbjct: 295 PDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY--NSQVTNALISTYAKSGSVENAR 352
Query: 533 DFINQ-MAFDDDIVVWKSLLASCKTHGNVDVG--KRAAENILKIDPTNSAALVLLCNIYA 589
++Q M D +++ + +LL G V +G + A E ++ + A + Y
Sbjct: 353 RIMDQSMETDLNVISFTALL-----EGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 407
Query: 590 SSGKWEEVARLMGSM 604
+G+ +E L SM
Sbjct: 408 QNGRNDEAIDLFRSM 422
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 298/587 (50%), Gaps = 66/587 (11%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
I+P+ T+A ++S C+S L LG ++H +S + D+ + N +L MY KC L+ A
Sbjct: 154 EIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAA 213
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R +FD PQ ++VSW +I+G QNG A L+ M+ +G+ PD TF S + + L
Sbjct: 214 RKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNEL 273
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ +++H ++I+ + ++ALI +Y K +D+
Sbjct: 274 LSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC---------------RDV------- 311
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+ A+ + + S + T+I+G EA+ F + + P +T
Sbjct: 312 ------EMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFS 365
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------ 356
S+ A +L G ++H IIK V +AIL A
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK 425
Query: 357 ------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
GE LF M T+ D ++ + + ACA + +L G ++H
Sbjct: 426 DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIH 485
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
++K L D++ + L+DMY KCG+L +R +F+ M++ + VSW+S+I Y G +
Sbjct: 486 GLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLK 545
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
E L LF M +G++P+HVT +G+++AC H G V+EG++ Y +M EYGI E +CV
Sbjct: 546 ECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACV 605
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
D+ RAGR+ EA + IN M F D VW +LL +C HGNV++ + A++++ +DP NS
Sbjct: 606 ADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNS 665
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N+ A +GKW +V ++ MKERGVRKVPG SWIE+ H
Sbjct: 666 GYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATH 712
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 241/520 (46%), Gaps = 76/520 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ AC L+S+++G+ VH+ + + D + + ++ +Y + G L DA+ +FD +
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
PQ++ V W M+ G +NG AI+++++M S + P+ TF ++ C+ + LG
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 202 QLHAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
QLH I G L S N L+AMY+K + A +F + + D+ S
Sbjct: 180 QLHG--IAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVS---------- 227
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
WN II+G EA LF M + PD +T S L
Sbjct: 228 ------------------WNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPC 269
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNV-------------------------------PVC 348
LSL +IH YII+ +V VC
Sbjct: 270 VNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVC 329
Query: 349 NA-----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+L + E F ++ + KP +TF+ + A A +A+L +G +LH I+K
Sbjct: 330 TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIK 389
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
T L V + ++DMY KCG L A +FN + + D + W+S+I +Q G EA+ L
Sbjct: 390 TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINL 449
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE---RRSCVVD 520
FR+M G R + V++ G L+AC+++ + G +++ +M P R S ++D
Sbjct: 450 FRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG----PLRSDLYAESSLID 505
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+ A+ G ++ + ++M + + V W S++++ HG++
Sbjct: 506 MYAKCGNLNFSRRVFDRMQ-ERNEVSWNSIISAYGNHGDL 544
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 214/476 (44%), Gaps = 76/476 (15%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY + GSL+DA+ +F + +W MI G + GQ N A+ Y++ML +G+ PD++T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F +++AC GL V +G+ +H V + ++LI +Y + + DA +F +I
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+KD W M++G+ K ++ A+ +F EM
Sbjct: 121 QKDSVLWNVMLNGYVK----------------------------NGDSGNAIKIFLEMRH 152
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------- 356
E+ P+ +T +L C S L G Q+H + G + PV N +L +
Sbjct: 153 SEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQA 212
Query: 357 -----------------------------GELFRLFSLMLASQTKPDHITFNDVMGACAA 387
GE LF M+++ KPD ITF +
Sbjct: 213 ARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNE 272
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ SL+ ++H YI++ + LDVF+ + L+D+Y KC + A+++ D V +++
Sbjct: 273 LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTM 332
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I GY G +EAL+ FR + ++P VT + A + + + G +L+
Sbjct: 333 ISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHG------S 386
Query: 508 IIPTRERRSC-----VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
II T+ C ++D+ A+ GR+ A N++ + D + W S++ SC +G
Sbjct: 387 IIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRIT-EKDAICWNSMITSCSQNG 441
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 192/605 (31%), Positives = 305/605 (50%), Gaps = 69/605 (11%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLIS--ACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
E L F + + RP Y I+ +CS L+ L+LG+ +H L K D + +
Sbjct: 85 ETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHG-FLKKKIDSDMFVGS 143
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLM 178
++ +Y KCG + DA VF E P+ +VV WT++I G QNG A+ + +M+ +
Sbjct: 144 ALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVS 203
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD T S AC+ L LGR +H V + + L N+++ +Y K I A N+
Sbjct: 204 PDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANL 263
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + KDI S W++++A A A++LF
Sbjct: 264 FREMPYKDIIS----------------------------WSSMVACYADNGAETNALNLF 295
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----- 353
+EM D+ + + +TV S L AC S +L +G QIH + GF ++ V A++
Sbjct: 296 NEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKC 355
Query: 354 ---HQAGELFR----------------------------LFSLMLASQTKPDHITFNDVM 382
A ELF +F ML++ T+PD I ++
Sbjct: 356 FSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKIL 415
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A + + ++ LH ++ K+G + F+ L+++Y KC S+ +A ++F + DVV
Sbjct: 416 AASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVV 475
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+WSS+I Y G GEEALKL +M + S V+PN VT V +L+ACSH GL+EEG++++ +
Sbjct: 476 TWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHV 535
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M NEY ++P E +VDLL R G + +A D IN M VW +LL +C+ H N+
Sbjct: 536 MVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIK 595
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+G+ AA N+ +DP ++ LL NIY W + A+L +KE ++K+ GQS +EI+
Sbjct: 596 IGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIK 655
Query: 622 TKIHA 626
++H+
Sbjct: 656 NEVHS 660
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
TQLH +K GLALD FV+ L +Y + SL A +LF V W++L+ Y
Sbjct: 21 TQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLE 80
Query: 455 GCGEEALKLFRRMRSSGV---RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G E L LF +M + V RP++ T+ L +CS + +E G ++ ++ + I
Sbjct: 81 GKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKK--IDSD 138
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
S +++L ++ G++++A + D+V+W S++ + +G+ ++
Sbjct: 139 MFVGSALIELYSKCGQMNDAVKVFTEYP-KPDVVLWTSIITGYEQNGSPELA 189
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 308/603 (51%), Gaps = 73/603 (12%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS--KCQPDAVLHNHILNMYGKCGSL 131
T+ + TYA L AC+ + LQ G +H ++L Q D L NHI+NMY KCG L
Sbjct: 84 THSSLSLQTYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHL 143
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
AR VFD+M RN+VSWTA+I+G +Q+G L+ +L + P++F F S++ AC
Sbjct: 144 AYARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSGLL-AHFRPNEFAFASLLSAC 202
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
+ G Q+HA +K +++ N+LI MY+K + +G
Sbjct: 203 EEHD-IKCGMQVHAVALKISLDANVYVANSLITMYSK------------------RSGFG 243
Query: 252 SMIDGFSKL-DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
G+++ D A T+F ME NL SWN++IA ++A+ LF+ M + D
Sbjct: 244 G---GYAQTPDDAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDR 300
Query: 311 LTVRSLL-----CACTSPLSLY--QGMQIHSYIIKKGFYSNVPVCNAILQHQAG------ 357
T+ S+ C ++ Y + Q+H IK G S + V A+++ A
Sbjct: 301 ATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHIS 360
Query: 358 -------------------------------ELFRLFSLMLASQTKPDHITFNDVMGACA 386
+ F LF + PD TF+ + ACA
Sbjct: 361 DCYRIFHDTSSQLDIVSWTALISVFAERDPEQAFLLFCQLHRQSYLPDWYTFSIALKACA 420
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ + +H ++K G D + N LM Y +CGSL + ++FN M D+VSW+S
Sbjct: 421 YFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNS 480
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
++ YA G ++AL+LF++M V P+ T V +L+ACSHVGLV+EG++L+ M +++
Sbjct: 481 MLKSYAIHGQAKDALELFQQM---NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDH 537
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
G++P + SC+VDL RAG++ EAE+ I +M D V+W SLL SC+ HG + K A
Sbjct: 538 GVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLA 597
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
A+ +++P NS V + NIY+S G + + + M + VRK PG SW+EI ++H
Sbjct: 598 ADKFKELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHE 657
Query: 627 SGN 629
G+
Sbjct: 658 FGS 660
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 311/582 (53%), Gaps = 24/582 (4%)
Query: 63 ALVAFDFLQNNTNFRI-RPSTYADLISACSSLRSLQLGRKVHD---HILSSKCQPDAVLH 118
AL F + ++T+ + P ++A + +A + + S G H + SS + +
Sbjct: 102 ALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVS 161
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GL 177
+LNMY K G++ DAR VFD+MP RN VSW AM++G + A EL+ MLQ L
Sbjct: 162 TALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPL 221
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
++F +++ A S + +G QLH V+K + +N+L+ MY K + + A
Sbjct: 222 EKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMA 281
Query: 238 VFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSN---- 290
VF S ++ +W +MI G+++ D A T+F +M S + G+ + S+
Sbjct: 282 VFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGA 341
Query: 291 ---ANEAMSLFSEMG-DREL-IPDGLTVRSLLCACTSPLS--LYQGMQIHSYIIKKGFYS 343
+A L ++G +R++ + L C CT +Q + +I
Sbjct: 342 LVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAM-- 399
Query: 344 NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ + + E L+S M P ++T V+ ACA +A+LE G QLH I+K
Sbjct: 400 ---ITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILK 456
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G L V L MY KCG+L + +F M D D++SW+S+I G++Q G G +AL L
Sbjct: 457 CGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDL 516
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M+ G+ P+H+T + VL ACSH+GLV+ G +R M +YG+IP + +C+VD+L+
Sbjct: 517 FEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILS 576
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG++ EA+DFI + D +W+ +L +C++ + DVG A E ++++ +S+A +L
Sbjct: 577 RAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYIL 636
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L NIYA+ KW +V R+ M+ RGV K PG SW+E+ +++
Sbjct: 637 LSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVN 678
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 206/664 (31%), Positives = 321/664 (48%), Gaps = 138/664 (20%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+ L RK+ D + S D N +L Y +E+AR +F+ MP+RN VSWT MI+G
Sbjct: 142 ITLARKLFDAMPSR----DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISG 197
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
Q A +++ ML G+ P+Q S++ A L G+ +H V K+
Sbjct: 198 YVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERD 257
Query: 216 LISQNALIAMYTK-----------FD---------------------RILDAWNVFSSIA 243
++ A++ YTK F+ RI DA+ V+
Sbjct: 258 VVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDP 317
Query: 244 RKDITSWGSMIDG---FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
K + S SM+ G + ++D A+ +F+++ PN+ SWN +I G +EA LF+
Sbjct: 318 LKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNR 377
Query: 301 MGDRELIP----------DGLTVRSLLC---------------------ACTSPLSLYQG 329
M R I +G + ++L+ AC++ +L G
Sbjct: 378 MPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETG 437
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFSLMLASQT------------- 371
Q+HS +K G N VCNA++ G + ++F M T
Sbjct: 438 KQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQN 497
Query: 372 --------------KPDHITFNDVMGACAA------------------------------ 387
PD +++ ++ ACA
Sbjct: 498 NLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILL 557
Query: 388 -----MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
+ + ++G Q+H +K G+ + V N L+ MY KC S S + +F+ ME+ D+
Sbjct: 558 GLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLK-VFDSMEERDIF 616
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+W+++I GYAQ G G EA+++++ M S+GV PN VT VG+L ACSH GLV+EG Q ++ M
Sbjct: 617 TWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSM 676
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
++YG+ P E +C+VDLL RAG V AE FI M + D V+W +LL +CK H NV++
Sbjct: 677 SSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEI 736
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
G+RAAE + I+P+N+ V+L NIY+S G W+EVA++ MKERGV K PG SW++I+
Sbjct: 737 GRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKN 796
Query: 623 KIHA 626
K+H+
Sbjct: 797 KMHS 800
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 151/344 (43%), Gaps = 67/344 (19%)
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL----------------- 131
ACS++ +L+ G++VH + + CQ ++ + N ++ +YGK S+
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486
Query: 132 --------------EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
++AR VF+ MP +VVSWT +I+ C+Q Q N A+E++ ML
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
+P+ ++ L LG+Q+H IK S L+ NAL++MY K D+
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA-DSLK 605
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF S+ +DI +W NTII G A EA+ +
Sbjct: 606 VFDSMEERDIFTW----------------------------NTIITGYAQHGLGREAIRM 637
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAIL 352
+ M ++P+ +T LL AC+ + +G Q + Y P+ C L
Sbjct: 638 YQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSD--YGLTPLLEHYACMVDL 695
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+AG++ + +PD + ++ ++GAC ++E+G +
Sbjct: 696 LGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRR 739
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 174/437 (39%), Gaps = 87/437 (19%)
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
G+ G L +AR VFD MP R++++W +MI NG MPD
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNG-----------------MPDA---- 82
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
GR L + G +L + L++ Y + R+ DA VF + +
Sbjct: 83 --------------GRSLADAI----SGGNLRTGTILLSGYARAGRVRDARRVFDGMGVR 124
Query: 246 DITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+ +W +M+ + + + AR +F+ M S +++SWNT++ G EA +LF M
Sbjct: 125 NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMP 184
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL 362
+R G V + +L Q G + +
Sbjct: 185 ER----------------------------------NGVSWTVMISGYVLIEQHGRAWDM 210
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F ML P+ V+ A + + +H + KTG DV V +++ Y K
Sbjct: 211 FRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTK 270
Query: 423 -CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
L SA + F M + +WS++I +Q G ++A +++R V P+ ++
Sbjct: 271 DVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV-PSRTSM-- 327
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
LT + G +++ L+ + P + ++ + V EAED N+M F
Sbjct: 328 -LTGLARYGRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR 381
Query: 542 DDIVVWKSLLASCKTHG 558
+ I W ++A +G
Sbjct: 382 NTI-SWAGMIAGYARNG 397
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 196/490 (40%), Gaps = 111/490 (22%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
GR + D I + +L L+ Y + G + DAR VFD M RN V+W AM+ Q
Sbjct: 83 GRSLADAISGGNLRTGTIL----LSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQ 138
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
NG A +L+ M D ++ +++ +G C L + ++ + + +S
Sbjct: 139 NGDITLARKLFDAMPSR----DVSSWNTML---TGYCHSQLMEEAR-NLFERMPERNGVS 190
Query: 219 QNALIAMYTKFDRILDAWNVFSSIA----------------------------------- 243
+I+ Y ++ AW++F ++
Sbjct: 191 WTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVH 250
Query: 244 ----RKDITSWGSMIDGFSK----LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+D+ ++++G++K LD A F M + N +W+TIIA ++ ++A
Sbjct: 251 KTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAF 310
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--- 352
+++ R+ + + S+L L+ Y + + + NV NA++
Sbjct: 311 AVYQ----RDPLKSVPSRTSMLTG----LARYGRIDDAKILFDQIHEPNVVSWNAMITGY 362
Query: 353 --QHQAGELFRLFSLMLASQTKPDHITFNDVMGACA-------AMASLE----------- 392
E LF+ M T I++ ++ A A+ SL+
Sbjct: 363 MQNEMVDEAEDLFNRMPFRNT----ISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSL 418
Query: 393 -----------------MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
G Q+H +K G + +V N L+ +Y K S+GS R++F+
Sbjct: 419 SSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDR 478
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M D VS++S + Q +EA +F M S P+ V+ +++AC+ E
Sbjct: 479 MTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS----PDVVSWTTIISACAQADQGNEA 534
Query: 496 LQLYRIMQNE 505
++++R M +E
Sbjct: 535 VEIFRSMLHE 544
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQ-NLYNEALVAFDFLQNNTNFRIRPSTYAD 85
L D+A +V ++ D+ + S C Q + NEA+ F + + P
Sbjct: 499 LFDEARDVFNNMPS--PDVVSWTTIISACAQADQGNEAVEIFRSMLHERELP-NPPILTI 555
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+ +L + QLG+++H + V+ N +++MY KC S D+ VFD M +R+
Sbjct: 556 LLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERD 614
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ +W +I G +Q+G AI +Y M+ +G++P++ TF ++ ACS V G Q
Sbjct: 615 IFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQF 672
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
P +S + L R GR+HEA + + M F DI+ W S++ + +G D G+ A+
Sbjct: 31 PGTSAQSARIRELGRLGRLHEAREVFDSMPF-RDIIAWNSMIFAYCNNGMPDAGRSLAD- 88
Query: 570 ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
I N +L + YA +G+ + R+ M GVR
Sbjct: 89 --AISGGNLRTGTILLSGYARAGRVRDARRVFDGM---GVRNT 126
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 295/607 (48%), Gaps = 76/607 (12%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV------HDHILSSKCQPDA 115
EAL+ F +N ++P D +L++ LG + H + S
Sbjct: 139 EALILF------SNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSV 192
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
+ + +++MY K G +E VF +M +RNVVSWTA+IAG G A+ + +M S
Sbjct: 193 FVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWIS 252
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
+ D TF ++A + + G+ +H IK N L MY K
Sbjct: 253 KVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKC------ 306
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
K D+ +F +M+ P++ SW T+I A+
Sbjct: 307 ----------------------GKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAV 344
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
F M + P+ T +++ AC + G QIH ++++ G + V N+I+
Sbjct: 345 EAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLY 404
Query: 354 -------------------------------HQAG---ELFRLFSLMLASQTKPDHITFN 379
Q G E F S M KP+ +
Sbjct: 405 SKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALS 464
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V+ C +MA LE G Q+H +++ G+ + V + L+ MY KCGS+ A ++FN M+
Sbjct: 465 SVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKIN 524
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+++SW+++I GYA+ G +EA+ LF ++ S G++P++VT +GVLTACSH G+V+ G +
Sbjct: 525 NIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYF 584
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+M NEY I P++E C++DLL RAGR+ EAE I M D VVW +LL SC+ HG+
Sbjct: 585 MLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGD 644
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
VD G+ AE +L++DP ++ + L NIYA+ G+W+E A + MK +GV K G SW+
Sbjct: 645 VDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVN 704
Query: 620 IQTKIHA 626
+ K++A
Sbjct: 705 VNDKLNA 711
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 208/477 (43%), Gaps = 67/477 (14%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGL 177
N L K G L +R +FD+M R+ +SWT +IAG A+ L+ M +Q GL
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
DQF ++AC + G LH +KS + + +ALI MY K +I
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF + ++++ S W IIAG+ EA+
Sbjct: 214 VFKKMTKRNVVS----------------------------WTAIIAGLVHAGYNMEALLY 245
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN--AILQHQ 355
FSEM ++ D T L A L+ G IH+ IK+GF + V N A + ++
Sbjct: 246 FSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNK 305
Query: 356 AGE---LFRL-------------------------------FSLMLASQTKPDHITFNDV 381
G+ + RL F M S P+ TF V
Sbjct: 306 CGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAV 365
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ ACA +A + G Q+H ++++ GL + V N ++ +Y K G L SA +F+ + D+
Sbjct: 366 ISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDI 425
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SWS++I Y+Q G +EA MR G +PN L VL+ C + L+E+G Q++
Sbjct: 426 ISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAH 485
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ GI S ++ + ++ G V EA N M ++I+ W +++ HG
Sbjct: 486 VLC-IGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKI-NNIISWTAMINGYAEHG 540
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM- 467
++ +N + VK G L +R +F+ M D +SW++LI GY EAL LF M
Sbjct: 89 NMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 148
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
G++ + + L AC +G+ +L + G+I + S ++D+ + G+
Sbjct: 149 VQPGLQRDQFMISVALKACG-LGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGK 207
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLA 552
+ + +M ++V W +++A
Sbjct: 208 IEQGCRVFKKMT-KRNVVSWTAIIA 231
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/587 (32%), Positives = 303/587 (51%), Gaps = 103/587 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILS---SKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T +++S+C+ ++ +GRKVH ++ C P A N +LNMYGKCG E A VF
Sbjct: 60 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA---NSVLNMYGKCGDSETATTVF 116
Query: 139 DEMP-------------------------------QRNVVSWTAMIAGCSQNGQENAAIE 167
+ MP R++VSW AMIAG +QNG + A++
Sbjct: 117 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 176
Query: 168 LYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
L+ +ML +S + PD+FT S++ AC+ L V +G+Q+HA+++++E + NALI+ Y
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 236
Query: 227 TKFDRILDAWNVFSSIARKD--ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
K + +A + D + S+ ++++G+ K+ +MES
Sbjct: 237 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKI-------GDMES------------ 277
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
A +F M +R+++ + M + G+ N
Sbjct: 278 ---------AREMFGVMNNRDVVA------------------WTAMIV-------GYEQN 303
Query: 345 VPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ E LF M+ +P+ T V+ CA++A L+ G Q+HC +++
Sbjct: 304 ---------GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 354
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKL 463
L V N ++ MY + GS AR +F+ + + ++W+S+IV AQ G GEEA+ L
Sbjct: 355 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 414
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M +GV P+ +T VGVL+ACSH G V EG + Y ++NE+ I P +C+VDLLA
Sbjct: 415 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 474
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG EA++FI +M + D + W SLL++C+ H N ++ + AAE +L IDP NS A
Sbjct: 475 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 534
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
+ N+Y++ G+W + AR+ + KE+ VRK G SW I++KIH G D
Sbjct: 535 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGAD 581
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 224/441 (50%), Gaps = 39/441 (8%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
M+ K G L DAR VF EMP+R+ VSWT M+ G ++ G+ AI+ + M G P QFT
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+++ +C+ +GR++H+ V+K GS + N+++ MY K A VF +
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 244 RKDITSWGSMID---GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ ++SW +M+ ++D A ++F M ++ SWN +IAG +A+ LFS
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 301 M-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
M + + PD T+ S+L AC + ++ G Q+H+YI++ N V NA++ A
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS- 239
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
S+E ++ M+T L+V L++
Sbjct: 240 -----------------------------GSVENARRIMDQSMETD--LNVISFTALLEG 268
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
YVK G + SARE+F M + DVV+W+++IVGY Q G +EA+ LFR M + G PN TL
Sbjct: 269 YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTL 328
Query: 480 VGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
VL+ C+ + ++ G Q++ R +++ + + + ++ + AR+G A +Q+
Sbjct: 329 AAVLSVCASLACLDYGKQIHCRAIRSL--LEQSSSVSNAIITMYARSGSFPWARRMFDQV 386
Query: 539 AFDDDIVVWKSLLASCKTHGN 559
+ + + W S++ + HG
Sbjct: 387 CWRKETITWTSMIVALAQHGQ 407
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 201/477 (42%), Gaps = 80/477 (16%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D A + +S R W+ + + + L +AL F + + ++ T ++
Sbjct: 140 MDLAESLFESMPDRSIVSWN-AMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVL 198
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE------- 140
SAC++L ++++G++VH +IL ++ ++ + N +++ Y K GS+E+AR + D+
Sbjct: 199 SACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLN 258
Query: 141 --------------------------MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
M R+VV+WTAMI G QNG+ + AI+L+ M+
Sbjct: 259 VISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMIT 318
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRI 232
G P+ +T +++ C+ L C+ G+Q+H I+S E S + NA+I MY +
Sbjct: 319 CGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV--SNAIITMYARSGSF 376
Query: 233 LDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
A +F + RK+ +W SM I +A
Sbjct: 377 PWARRMFDQVCWRKETITWTSM----------------------------IVALAQHGQG 408
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP----- 346
EA+ LF EM + PD +T +L AC+ + +G + + I K + P
Sbjct: 409 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI--KNEHQIAPEMSHY 466
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
C L +AG + +PD I + ++ AC + E+ +L + +
Sbjct: 467 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA-ELAAEKLLSID 525
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV-----VSWSSLIVGYAQFGCGE 458
+ + + ++Y CG A ++ ++ V SW+ + FG +
Sbjct: 526 PNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADD 582
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
GE + M A P T +V+ +CA + +G ++H +++K GL V V N +
Sbjct: 40 GEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSV 99
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
++MY KCG +A +F M V SW++++ G + A LF M +
Sbjct: 100 LNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI---- 155
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
V+ ++ + GL + L+L+ M +E + P
Sbjct: 156 VSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP-------------------------- 189
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGKWE 595
D+ + S+L++C GNV +GK+ IL+ + NS L + YA SG E
Sbjct: 190 -----DEFTI-TSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVE 243
Query: 596 EVARLMGSMKERGVRKVPGQSWIEIQTKI 624
R+M E + + + +E KI
Sbjct: 244 NARRIMDQSMETDLNVISFTALLEGYVKI 272
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 207/604 (34%), Positives = 306/604 (50%), Gaps = 74/604 (12%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
L+ E V D N+ +F YA LI + R L ++H+ ++ S Q + L
Sbjct: 41 LHPEHFVNHDHCFNSDSF------YASLIDNSTHKRHLD---QIHNRLVISGLQHNGFLM 91
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
++N G + AR +FDE +V W A+I S+N +E+Y M +G+
Sbjct: 92 TKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVH 151
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD FTF +++AC+ L GL +H +IK GS + QN L+A+Y K I A V
Sbjct: 152 PDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVV 211
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + + I SW S II+G A A EA+ +F
Sbjct: 212 FDGLYHRTIVSWTS----------------------------IISGYAQNGKAVEALRMF 243
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-------------FY--- 342
S+M + + PD + + S+L A T L QG IH ++IK G FY
Sbjct: 244 SQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKC 303
Query: 343 ---------------SNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVM 382
+NV + NA++ A E LF M++ KPD +T +
Sbjct: 304 GLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAV 363
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A A + SLE+ + Y+ K+ D+FV L+DMY KCGS+ AR +F+ D DVV
Sbjct: 364 LASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVV 423
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
WS++I+GY G G EA+ L+ M+ +GV PN VT +G+LTAC+H GLV+EG +L+ M
Sbjct: 424 MWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM 483
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ ++ I+P E SCVVDLL RAG + EA FI ++ + + VW +LL++CK + V +
Sbjct: 484 K-DFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTL 542
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
G+ AA + +DP N+ V L N+YASS W+ VA + M+E+G+ K G S IEI
Sbjct: 543 GEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEING 602
Query: 623 KIHA 626
K+ A
Sbjct: 603 KLQA 606
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 13/296 (4%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C + A V D R W + S + EAL F ++NN ++P
Sbjct: 199 YAKCGHIGVAKVVFDGLYHRTIVSWT-SIISGYAQNGKAVEALRMFSQMRNNG---VKPD 254
Query: 82 TYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
A ++ A + + L+ GR +H ++ + + L + Y KCG + A+ FD
Sbjct: 255 WIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFD 314
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+M NV+ W AMI+G ++NG A+ L+ M+ + PD T S + A + + + L
Sbjct: 315 QMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLEL 374
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI----- 254
+ + +V KS +GS + +LI MY K + A VF + KD+ W +MI
Sbjct: 375 AQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGL 434
Query: 255 --DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
G+ ++ + PN ++ ++ E LF M D E++P
Sbjct: 435 HGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVP 490
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/643 (30%), Positives = 333/643 (51%), Gaps = 39/643 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C LD++ V + ++ W + + + N + L F +Q +
Sbjct: 224 DMYAKCKRLDESFTVFYAMPQKNWISWS-AIIAGCVQNNFLDGGLKMFKEMQK-VGVGVS 281
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
S YA ++ +C++L L+LG ++H H L S D ++ L+MY KC +++DA+ +FD
Sbjct: 282 QSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFD 341
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
N+ S+ AMI G SQ A+ L+ ++ +S L D+ + +RAC+ + +
Sbjct: 342 MSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSE 401
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G QLH KS ++ NA I MY K + + +A VF + RKD SW ++I +
Sbjct: 402 GLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQ 461
Query: 260 LDFARTVFNEMES-------PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+ N + S P+ ++ +++ A S N M + + + + +
Sbjct: 462 NEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDS-LNHGMEIHTTIVKLGMASNPYI 520
Query: 313 VRSLLCACTSPLSLYQGMQIHSYII----KKGFYSNVP---------------------- 346
SL+ + + + +IH+ I YS P
Sbjct: 521 GSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWN 580
Query: 347 --VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ +++ Q+ + R F+ M+ PD T++ V+ CA +AS+ +G Q+H +++K
Sbjct: 581 AIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK 640
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L DV++ + L+DMY KCG+L +R +F D V+W+++I GYA G GEEA+KLF
Sbjct: 641 ELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLF 700
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M + PNH T V +L AC+H+GLVE GL + +M+ EYG+ P E S +VD+L +
Sbjct: 701 ESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGK 760
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH-GNVDVGKRAAENILKIDPTNSAALVL 583
+G V +A + I +M F+ D V+W++LL++CK + NV+ + AA +L++DP +S+ +L
Sbjct: 761 SGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYIL 820
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L NIYA +G W++ + L +M+ ++K PG SW+EI+ + H
Sbjct: 821 LSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHT 863
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 262/571 (45%), Gaps = 102/571 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+++ ++ CS L + +LG ++H L D V + +L+MY KC L+++ VF M
Sbjct: 183 SFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAM 242
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
PQ+N +SW+A+IAGC QN + ++++ +M + G+ Q + S++++C+ L + LG
Sbjct: 243 PQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGT 302
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLHAH +KS+ I + A + MY K + + DA +F ++ S+ +MI G+S+ D
Sbjct: 303 QLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKD 362
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N A+ LF ++ L D +++ L AC
Sbjct: 363 ----------------------------NGFRALLLFRKLSKSSLGFDEISLSGALRACA 394
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNA------------------------------- 350
+ L +G+Q+H K F N+ V NA
Sbjct: 395 TVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNA 454
Query: 351 -ILQHQAGE----LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
I H+ E + ML S +PD TF V+ ACA SL G ++H I+K G
Sbjct: 455 IIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLG 513
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFN-----------FMEDPD-------------- 440
+A + ++ + L+DMY KCG + A ++ N + E P+
Sbjct: 514 MASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQ 573
Query: 441 --VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
+VSW+++I GY E+A + F RM G+ P+ T VL C+++ + G Q+
Sbjct: 574 EMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQI 633
Query: 499 Y-RIMQNE--YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ +++ E Y + S +VD+ ++ G +H++ + + A D V W +++
Sbjct: 634 HAHVIKKELQYDVYIC----STLVDMYSKCGNLHDSR-LMFEKAPIRDFVTWNAMICGYA 688
Query: 556 THGNVDVGKRAAEN--ILKIDPTNSAALVLL 584
HG + + E+ ++ I P ++ + LL
Sbjct: 689 HHGMGEEAIKLFESMVLMNIMPNHATFVSLL 719
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 194/457 (42%), Gaps = 84/457 (18%)
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E P +V +++ + C++ + + M+ SG P F
Sbjct: 43 EKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFV---------------- 86
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
N L+ +Y + A +F + +D+ SW +MI G++
Sbjct: 87 -------------------SNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAA 127
Query: 260 L-DFART--VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
D R F M + ++ SWN++++G E++ +F EMG + D + +
Sbjct: 128 SNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVI 187
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLF-------- 363
L C+ + G QIH ++ G+ ++V +A+L A E F +F
Sbjct: 188 LKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNW 247
Query: 364 ---SLMLASQTKPDHI--------------------TFNDVMGACAAMASLEMGTQLHCY 400
S ++A + + + + V+ +CA + L +GTQLH +
Sbjct: 248 ISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAH 307
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K+ D V +DMY KC ++ A+ LF+ E+ ++ S++++I GY+Q G A
Sbjct: 308 ALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRA 367
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV-- 518
L LFR++ S + + ++L G L AC+ V + EGLQL+ + R CV
Sbjct: 368 LLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATK-----SNFSRNICVAN 422
Query: 519 --VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+D+ + + EA ++M D V W +++A+
Sbjct: 423 AFIDMYGKCEALDEACRVFDEMG-RKDAVSWNAIIAA 458
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 37/248 (14%)
Query: 361 RLFSLMLASQTKPDHIT----FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
R+FS+ AS T F+ V CA + E+G Q H +++ +G VFV N L
Sbjct: 31 RIFSISTASVNHEKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCL 90
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA------------------------ 452
+ +Y+ CG+LG A +LF+ M DVVSW+++I GYA
Sbjct: 91 LQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWN 150
Query: 453 -------QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
Q G E++K+F M SGV ++ + +L CS + + G Q++ I
Sbjct: 151 SMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIAL-R 209
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
G S ++D+ A+ R+ E+ M + + W +++A C + +D G +
Sbjct: 210 MGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMP-QKNWISWSAIIAGCVQNNFLDGGLK 268
Query: 566 AAENILKI 573
+ + K+
Sbjct: 269 MFKEMQKV 276
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/637 (30%), Positives = 312/637 (48%), Gaps = 65/637 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L V D L R W+ + Y EA+ F + + FR +
Sbjct: 55 CGGLKDVKRVFDEMLERDVVSWN-SVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIV 113
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ C+ L GR++H +++ + + N ++++YGKCG ++D+R VFDE+ +R
Sbjct: 114 SVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISER 173
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N VSW A+I + + A+E++ M+ G+ P+ TF S++ L G+++H
Sbjct: 174 NGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIH 233
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
++ S + NALI MY K R L A NVF+ I K+I SW +M+ F++
Sbjct: 234 GFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQ----- 288
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
N +E A+ L +M IP+ +T ++L AC
Sbjct: 289 ---NRLELA--------------------AVDLVRQMQADGEIPNSVTFTNVLPACARIG 325
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---------------------------- 356
L G +IH+ I+ G ++ V NA+ A
Sbjct: 326 FLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKISLRDEVSYNILIIG 385
Query: 357 -------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
E RLF M K D +++ V+ ACA +A+L+ G ++H ++ L
Sbjct: 386 YSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTH 445
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
+F+ N L+D Y+KCG + A ++F + D SW+S+I+GY G A+ LF M+
Sbjct: 446 LFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKE 505
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
GV + V+ + VL+ACSH GLVEEG + + MQ + I PT+ +C+VDLL RAG +
Sbjct: 506 DGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGLIE 564
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
EA I + + D VW +LL +C+ HG +++ AAE++ K+ P +S +L N+YA
Sbjct: 565 EAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYA 624
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+GKW+E ++ MK RG +K PG SW++I ++HA
Sbjct: 625 EAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHA 661
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 163/601 (27%), Positives = 278/601 (46%), Gaps = 104/601 (17%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
R+ T+ ++ AC+ S+Q GR++H + D + N +L YG CG L+D +
Sbjct: 4 RLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKR 63
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLC 195
VFDEM +R+VVSW ++I S +G AI L+ +M L+SG P+ + S++ C+GL
Sbjct: 64 VFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
GRQ+H +V+K+ S + NAL+ +Y K + D+ VF I+ +
Sbjct: 124 DGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISER---------- 173
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
N SWN II +A +A+ +F M D + P+ +T S
Sbjct: 174 ------------------NGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSS 215
Query: 316 LLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELFR----- 361
+L L L+ G +IH + ++ G S++ V NA++ QA +F
Sbjct: 216 MLPVLVE-LKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEK 274
Query: 362 -----------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
L M A P+ +TF +V+ ACA + L G ++H
Sbjct: 275 NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIH 334
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
++TG ++D+FV N L DMY KCG L AR +F + D VS++ LI+GY+Q
Sbjct: 335 ARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCS 393
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE------------- 505
E+L+LF M G++ + V+ +GV++AC+++ +++G +++ + +
Sbjct: 394 ESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALL 453
Query: 506 ---------------YGIIPTRERRSCVVDLLARA--GRVHEAEDFINQMAFDD---DIV 545
+ IP+R+ S +L G + A + M D D V
Sbjct: 454 DFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSV 513
Query: 546 VWKSLLASCKTHGNVDVGKRAAEN--ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+ ++L++C G V+ GK+ E+ + I PT + ++ +G EE +L+ S
Sbjct: 514 SYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQ-MHYACMVDLLGRAGLIEEAVKLIES 572
Query: 604 M 604
+
Sbjct: 573 L 573
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 156/361 (43%), Gaps = 65/361 (18%)
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ D TF +++AC+ V GR++H V K S + N L+ Y + D
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
VF + +D+ SW S+I FS F EA+
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYA----------------------------EAI 93
Query: 296 SLFSEMGDRE-LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ- 353
LF EM R P+ +++ S+L C G QIH Y++K G S V V NA++
Sbjct: 94 HLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDV 153
Query: 354 -----------------------------------HQAGELFRLFSLMLASQTKPDHITF 378
+ + +F LM+ KP+ +TF
Sbjct: 154 YGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTF 213
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ ++ + + G ++H + ++ GL D+FV N L+DMY K G A +FN + +
Sbjct: 214 SSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGE 273
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
++VSW++++ +AQ A+ L R+M++ G PN VT VL AC+ +G + G ++
Sbjct: 274 KNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEI 333
Query: 499 Y 499
+
Sbjct: 334 H 334
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 198/629 (31%), Positives = 315/629 (50%), Gaps = 78/629 (12%)
Query: 40 RRFDDIWDFDLFSSLCKQNLYNEALVAFD----FLQNNTNFRIRPS--TYADLISACSSL 93
+ FD++ + LFS +Y + +++D F+Q + R P TY +I AC
Sbjct: 77 KLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDY 136
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++G +H + S DA + N ++ MY CG +E AR VFD M +R +VSW MI
Sbjct: 137 LLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMI 196
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G +NG A+ ++ M+ G+ PD T S++ CS L + +GR++HA V G
Sbjct: 197 NGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLG 256
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEM 270
+DI+ W S++D ++K +D A+ +F EM
Sbjct: 257 -------------------------------EDISVWNSLLDMYAKCGNMDEAQMIFYEM 285
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+ ++ SW T++ G +A A+ L M + P+ +T+ S+L AC S SL G
Sbjct: 286 DKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGR 345
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQAG--------------------------------- 357
+H + I++ S V V A++ A
Sbjct: 346 CLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNG 405
Query: 358 ---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
+ LF ML P+ T N ++ A A + L+ +H Y++++G + V
Sbjct: 406 LSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVAT 465
Query: 415 GLMDMYVKCGSLGSARELFNFM--EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
L+D+Y KCGSL SA +FN + +D D+++WS++I GY G GE A+ LF +M SGV
Sbjct: 466 ILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGV 525
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+PN +T +L ACSH GLV+EGL L++ M + + + +CV+DLL RAGR+ EA
Sbjct: 526 KPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAY 585
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
+ I MAF + VW +LL SC H NV++G+ AA+ + +++P N+ VLL NIY++ G
Sbjct: 586 ELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVG 645
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+W + + M G+RK P S IE++
Sbjct: 646 RWRDAEHVRLMMNNIGLRKTPAHSLIEVR 674
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF---VMNGLMDMYVKCGSLGSARELFN 434
+ ++ C + S+ Q+H + + GL + +++ L Y G AR+LF+
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR-PNHVTLVGVLTACSHVGLVE 493
+ +P + SW+++I Y G +AL LF +M +SG R P++ T V+ AC L E
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 494 EG 495
G
Sbjct: 141 MG 142
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 198/629 (31%), Positives = 315/629 (50%), Gaps = 78/629 (12%)
Query: 40 RRFDDIWDFDLFSSLCKQNLYNEALVAFD----FLQNNTNFRIRPS--TYADLISACSSL 93
+ FD++ + LFS +Y + +++D F+Q + R P TY +I AC
Sbjct: 77 KLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDY 136
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++G +H + S DA + N ++ MY CG +E AR VFD M +R +VSW MI
Sbjct: 137 LLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMI 196
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G +NG A+ ++ M+ G+ PD T S++ CS L + +GR++HA V G
Sbjct: 197 NGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLG 256
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEM 270
+DI+ W S++D ++K +D A+ +F EM
Sbjct: 257 -------------------------------EDISVWNSLLDMYAKCGNMDEAQMIFYEM 285
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+ ++ SW T++ G +A A+ L M + P+ +T+ S+L AC S SL G
Sbjct: 286 DKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGR 345
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQAG--------------------------------- 357
+H + I++ S V V A++ A
Sbjct: 346 CLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNG 405
Query: 358 ---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
+ LF ML P+ T N ++ A A + L+ +H Y++++G + V
Sbjct: 406 LSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVAT 465
Query: 415 GLMDMYVKCGSLGSARELFNFM--EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
L+D+Y KCGSL SA +FN + +D D+++WS++I GY G GE A+ LF +M SGV
Sbjct: 466 ILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGV 525
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+PN +T +L ACSH GLV+EGL L++ M + + + +CV+DLL RAGR+ EA
Sbjct: 526 KPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAY 585
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
+ I MAF + VW +LL SC H NV++G+ AA+ + +++P N+ VLL NIY++ G
Sbjct: 586 ELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVG 645
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+W + + M G+RK P S IE++
Sbjct: 646 RWRDAEHVRLMMNNIGLRKTPAHSLIEVR 674
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF---VMNGLMDMYVKCGSLGSARELFN 434
+ ++ C + S+ Q+H + + GL + +++ L Y CG AR+LF+
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR-PNHVTLVGVLTACSHVGLVE 493
+ +P + SW+++I Y G +AL LF +M +SG R P++ T V+ AC L E
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 494 EG 495
G
Sbjct: 141 MG 142
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 292/554 (52%), Gaps = 66/554 (11%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+ V+ N +L+ Y K G L AR VF EMP R+ V++ AM+ GCS+ G A++L+ M
Sbjct: 174 NVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR 233
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ GL +FTF +++ +G+ + LGRQ+H V ++ S++ N+L+ Y+K D
Sbjct: 234 RKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCD--- 289
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
LD + +F+EM + S+N +IAG A A+
Sbjct: 290 -------------------------CLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASI 324
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL- 352
+ LF EM L SLL S + G QIH+ ++ G S V NA++
Sbjct: 325 VLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALID 384
Query: 353 -----------------------------------QHQAGELFRLFSLMLASQTKPDHIT 377
Q E +LF M + PD T
Sbjct: 385 MYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRAT 444
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F+ + A + +A + +G QLH Y++++G VF + L+DMY KCG L A + F+ M
Sbjct: 445 FSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP 504
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ + +SW+++I YA +G + A+K+F M G +P+ VT + VL+ACSH GL EE ++
Sbjct: 505 ERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMK 564
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ +M+ EYGI P +E SCV+D L R GR + ++ + +M F+DD ++W S+L SC+TH
Sbjct: 565 YFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTH 624
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
GN D+ + AAE + + T++ V+L NI+A +GKWE+ A + M++RG+RK G SW
Sbjct: 625 GNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSW 684
Query: 618 IEIQTKIHA-SGND 630
+E++ K+++ S ND
Sbjct: 685 VEVKHKVYSFSSND 698
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 28/239 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
YA L+S S+ + +G+++H ++ + ++ N +++MY KCG L+ A+ F
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN 403
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+ VSWTAMI GC QNGQ+ A++L+ M ++GL PD+ TF S I+A S L +GLGRQ
Sbjct: 404 DKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQ 463
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
LH+++I+S H S + S +AL+ MYTK + +A F
Sbjct: 464 LHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTF----------------------- 500
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+EM N SWN +I+ A A A+ +F M PD +T S+L AC+
Sbjct: 501 -----DEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACS 554
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 176/411 (42%), Gaps = 63/411 (15%)
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDGFSK-- 259
L A ++K+ N L+ R+ A +F + R + S M+ G+S+
Sbjct: 21 LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80
Query: 260 -LDFARTVFNEMESP----NLASWNTIIAGVASC--SNANEAMSLFSEMGDRELIPDGLT 312
L A +F + SP + +W +I AS + A++A+SLF +M + PD +T
Sbjct: 81 QLSAAHHLF--LSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVT 138
Query: 313 VRSLL---CACTSPLSLYQGMQIHSYIIKKG-FYSNVPVCNAIL---------------- 352
V ++L A + +H + +K G +SNV VCN +L
Sbjct: 139 VATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVF 198
Query: 353 --------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ E LF+ M TF+ V+ + L
Sbjct: 199 QEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLC 258
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G Q+H + + + +VFV N L+D Y KC L ++LF+ M + D VS++ +I GYA
Sbjct: 259 LGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYA 317
Query: 453 QFGCGEEALKLFRRMRSSGVRPN---HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
C L+LFR M+S + +L+ V + H+G+ G Q++ + G+
Sbjct: 318 WNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGI---GKQIHAQLV-LLGLS 373
Query: 510 PTRERRSCVVDLLARAGRVHEAE-DFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++D+ ++ G + A+ +FIN+ D V W +++ C +G
Sbjct: 374 SEDLVGNALIDMYSKCGMLDAAKTNFINKN--DKTGVSWTAMITGCVQNGQ 422
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 18/226 (7%)
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQ 453
T L ++KTG + +N L+ + G L AR LF+ M + S + ++ GY++
Sbjct: 19 TPLDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSR 78
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVT---LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
G A LF + S + VT ++G A + + + L+R M E G+ P
Sbjct: 79 SGQLSAAHHLF--LSSPPHLRDAVTWTVMIGAF-ASAPGARASDAVSLFRDMLRE-GVAP 134
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAF-------DDDIVVWKSLLASCKTHGNVDVG 563
R + V++L +G A + F ++VV +LL + HG +
Sbjct: 135 DRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAA 194
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+R + + D A+++ C + G E L +M+ +G+
Sbjct: 195 RRVFQEMPHRDSVTYNAMMMGC---SKEGSHAEALDLFAAMRRKGL 237
>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11290-like [Cucumis sativus]
Length = 616
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 298/577 (51%), Gaps = 66/577 (11%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P IS C+ L G +VH I+ + + +++MYGKC S+ DA VFD
Sbjct: 68 PPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFD 127
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EM +VV+W +++ G Q G A+ L+++ML+ G+ P F+ + CS L L
Sbjct: 128 EMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDL 187
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G QLHA +K S+++ LI MY+K + D+ VF + K++ +W SMI G+++
Sbjct: 188 GSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYAR 247
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
N++ +EAM L EM L P+G+T SLL +
Sbjct: 248 --------NQL--------------------PHEAMXLMREMLHLNLEPNGMTYNSLLSS 279
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSN---------------------VPVCNAILQHQ--- 355
+ P + QIH II +G+ SN VC+ I
Sbjct: 280 FSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQIS 339
Query: 356 -----AG--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
AG E F M + D TF + A ++LE G Q+H +
Sbjct: 340 WNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVY 399
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KTG L++ V NGL+ MY + G++ ++ +F+ M + D++SW+SL+ G A GCGEEA+
Sbjct: 400 KTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAID 459
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR-ERRSCVVDL 521
LF +MR + ++P++ + + VLTACSHVGL+++GL+ +++M+N + P + E + +VDL
Sbjct: 460 LFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDL 519
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
RAG+++EAE FI + + I ++K+LL++C HGN D+ R A+ +L++ P + A
Sbjct: 520 FGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATY 579
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
++L N G W++ A + M RGV+K PG SW+
Sbjct: 580 IMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 204/454 (44%), Gaps = 25/454 (5%)
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
I+ VQ+L+ G P I C+ + G Q+H+ +IK + AL+ M
Sbjct: 53 IQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDM 112
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNL-ASWNTI 281
Y K I DA VF ++ + +W S++ G+ + + A ++F EM + + ++
Sbjct: 113 YGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSL 172
Query: 282 IAGVASCSNANE--------AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
G+ CS + AMSL ++ GL C +L ++
Sbjct: 173 SGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCC-----NLQDSRRVF 227
Query: 334 SYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
++ K ++ + + ++Q E L ML +P+ +T+N ++ + + +
Sbjct: 228 DIMLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFD 287
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVK-CGSLGSARELFNFMEDPDVVSWSSLIVGY 451
Q+HC I+ G + ++ L+ Y + CGSL R++ + + D +SW+++I G+
Sbjct: 288 KCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGF 347
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G GEEAL+ F +MR + T + A +EEG Q++ ++ G
Sbjct: 348 TNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKT-GYTLN 406
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAA 567
++ +V + AR+G + +++ + M + D++ W SLL+ C HG +D+ ++
Sbjct: 407 LSVQNGLVSMYARSGAIRDSK-MVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMR 465
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+K D T+ A++ C+ K E +LM
Sbjct: 466 RTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLM 499
>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 616
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 298/577 (51%), Gaps = 66/577 (11%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P IS C+ L G +VH I+ + + +++MYGKC S+ DA VFD
Sbjct: 68 PPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFD 127
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EM +VV+W +++ G Q G A+ L+++ML+ G+ P F+ + CS L L
Sbjct: 128 EMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDL 187
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G QLHA +K S+++ LI MY+K + D+ VF + K++ +W SMI G+++
Sbjct: 188 GSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYAR 247
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
N++ +EAM L EM L P+G+T SLL +
Sbjct: 248 --------NQL--------------------PHEAMILMREMLHLNLKPNGMTYNSLLSS 279
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSN---------------------VPVCNAILQHQ--- 355
+ P + QIH II +G+ SN VC+ I
Sbjct: 280 FSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQIS 339
Query: 356 -----AG--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
AG E F M + D TF + A ++LE G Q+H +
Sbjct: 340 WNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVY 399
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KTG L++ V NGL+ MY + G++ ++ +F+ M + D++SW+SL+ G A GCGEEA+
Sbjct: 400 KTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAID 459
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR-ERRSCVVDL 521
LF +MR + ++P++ + + VLTACSHVGL+++GL+ +++M+N + P + E + +VDL
Sbjct: 460 LFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDL 519
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
RAG+++EAE FI + + I ++K+LL++C HGN D+ R A+ +L++ P + A
Sbjct: 520 FGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATY 579
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
++L N G W++ A + M RGV+K PG SW+
Sbjct: 580 IMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 204/454 (44%), Gaps = 25/454 (5%)
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
I+ VQ+L+ G P I C+ + G Q+H+ +IK + AL+ M
Sbjct: 53 IQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDM 112
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNL-ASWNTI 281
Y K I DA VF ++ + +W S++ G+ + + A ++F EM + + ++
Sbjct: 113 YGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSL 172
Query: 282 IAGVASCSNANE--------AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
G+ CS + AMSL ++ GL C +L ++
Sbjct: 173 SGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCC-----NLQDSRRVF 227
Query: 334 SYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
++ K ++ + + ++Q E L ML KP+ +T+N ++ + + +
Sbjct: 228 DIMLNKNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFD 287
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVK-CGSLGSARELFNFMEDPDVVSWSSLIVGY 451
Q+HC I+ G + ++ L+ Y + CGSL R++ + + D +SW+++I G+
Sbjct: 288 KCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGF 347
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G GEEAL+ F +MR + T + A +EEG Q++ ++ G
Sbjct: 348 TNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKT-GYTLN 406
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAA 567
++ +V + AR+G + +++ + M + D++ W SLL+ C HG +D+ ++
Sbjct: 407 LSVQNGLVSMYARSGAIRDSK-MVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMR 465
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+K D T+ A++ C+ K E +LM
Sbjct: 466 RTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLM 499
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 35/315 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C L + V D L + W + S + L +EA++ ++ + ++
Sbjct: 212 DMYSKCCNLQDSRRVFDIMLNKNVFTWT-SMISGYARNQLPHEAMI---LMREMLHLNLK 267
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK-CGSLEDARM 136
P+ TY L+S+ S R +++H I++ + + + ++ Y + CGSLED R
Sbjct: 268 PNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRK 327
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
V + + +SW A+IAG + G A+E ++QM + D FTF SI +A
Sbjct: 328 VCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSA 387
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G+Q+H V K+ + +L QN L++MY + I D+ VFS + D+ S
Sbjct: 388 LEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLIS------- 440
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
WN++++G A EA+ LF +M + PD + ++
Sbjct: 441 ---------------------WNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAV 479
Query: 317 LCACTSPLSLYQGMQ 331
L AC+ L +G++
Sbjct: 480 LTACSHVGLLDKGLE 494
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 300/568 (52%), Gaps = 27/568 (4%)
Query: 63 ALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
AL D+L +F S+ + L+ AC++ +L+ +VH I+ D + + L
Sbjct: 9 ALTFPDYLPTLRSFDTT-SSISTLLKACTTTSTLE---QVHARIIRKGLHQDHFIISQFL 64
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+ + VF+ + + V W I G S+N + + L+++M +S +PD+F
Sbjct: 65 TLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKF 124
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T+ S+I+ACS +C V G H ++ G + +LI +Y K IL A VF +
Sbjct: 125 TYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEM 184
Query: 243 ARKDITSWGSMIDG---FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+++ SW +MI G FS L AR +F+EM N SWN II+G C + A +F
Sbjct: 185 GERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFD 244
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQG---MQIHSYIIKKGFYSNVPVCNAIL---- 352
EM R ++ + T+ + Y M ++ ++ +V +A++
Sbjct: 245 EMPHRNVV-----------SFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYV 293
Query: 353 -QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD-V 410
Q E ++F M + KPD +M AC+ M SLE+ + Y+ K+ + +
Sbjct: 294 QNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRA 353
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V+ L+DM KCGS+ A +LF M D++S+ S++ G + GCG +A+ LF RM +
Sbjct: 354 HVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNE 413
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G+ P+ V +LTACS GLV+EG + M+ +Y I+P+ + +C+VDLL RAGR+ E
Sbjct: 414 GLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKE 473
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A + + M + W +LL +CK H ++++G+ A+ + +++P N+ VLL NIYA+
Sbjct: 474 AYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAA 533
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWI 618
+ +W +V+ L M+ERG+RK+PG SWI
Sbjct: 534 AEQWLDVSLLRNKMRERGIRKIPGCSWI 561
>gi|226499544|ref|NP_001141715.1| uncharacterized protein LOC100273844 [Zea mays]
gi|194705652|gb|ACF86910.1| unknown [Zea mays]
Length = 375
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/339 (48%), Positives = 216/339 (63%), Gaps = 37/339 (10%)
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
C + AM +F E DR+++ T S+L AC
Sbjct: 5 CLDFPSAMDVFHETNDRDVV----TWNSILTAC--------------------------- 33
Query: 348 CNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+QH+ E +F+LF L+ +S D I+ N+V+ A A + EM Q+H Y K GL
Sbjct: 34 ----VQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGL 89
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
D + N L+D Y KCGSL A +LF M DV SWSSLIVGYAQFG +EAL LF
Sbjct: 90 VSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFA 149
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
RMR+ GV+PNHVT VGVL ACS VGLV+EG Y IM+ EYGI+PT+E SCV+DLLARA
Sbjct: 150 RMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARA 209
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
GR+ EA F++QM F+ DI++W +LLA+ +TH +V++GKRAAE +L IDP++SAA VLLC
Sbjct: 210 GRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLC 269
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
NIYASSG W E ARL M+ GV+K PG+SWI+++ ++
Sbjct: 270 NIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGEL 308
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP--DQ 181
MY +C A VF E R+VV+W +++ C Q+ +L+ ++L S MP D+
Sbjct: 1 MYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLF-RLLHSS-MPSLDR 58
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
+ +++ A + L + +Q+HA+ K S I NALI Y K + DA +F
Sbjct: 59 ISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEI 118
Query: 242 IAR-KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ +D+ SW S+I G+++ +A+ EA+ LF+
Sbjct: 119 MGTGRDVFSWSSLIVGYAQFGYAK----------------------------EALDLFAR 150
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQ 355
M + + P+ +T +L AC+ + +G + Y I + Y VP C L +
Sbjct: 151 MRNLGVKPNHVTFVGVLIACSRVGLVDEG--CYYYSIMEPEYGIVPTKEHCSCVIDLLAR 208
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
AG L + +PD I +N ++ A +EMG +
Sbjct: 209 AGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKR 249
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ- 143
+++SA + L ++ ++VH + DA+L N +++ Y KCGSL+DA +F+ M
Sbjct: 63 NVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTG 122
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
R+V SW+++I G +Q G A++L+ +M G+ P+ TF ++ ACS + V G
Sbjct: 123 RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYY 182
Query: 204 HAHVIKSEHG 213
++ +++ E+G
Sbjct: 183 YS-IMEPEYG 191
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY +C SA ++F+ D DVV+W+S++ Q E+ KLFR + SS + ++
Sbjct: 1 MYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRIS 60
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
L VL+A + +G E Q++ + G++ + ++D A+ G + +A M
Sbjct: 61 LNNVLSASAELGYFEMAKQVH-AYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIM 119
Query: 539 AFDDDIVVWKSLLASCKTHG 558
D+ W SL+ G
Sbjct: 120 GTGRDVFSWSSLIVGYAQFG 139
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 286/533 (53%), Gaps = 46/533 (8%)
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ----FT 183
G + DAR +FD P R+VVSWTA++A ++ G + A L+ + PD T
Sbjct: 48 AGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR-------PDARRNVVT 100
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+ +++ SG G + A + + +++S N ++ YT R+ DAW +F +
Sbjct: 101 WTALL---SGYARAGRVDEAEA-LFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMP 156
Query: 244 RKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+D SW ++ + +D AR +F+ M N+ +W T++AG+A + +EA +LF
Sbjct: 157 VRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDG 216
Query: 301 MGDRELIP---------------------------DGLTVRSLLCACTSPLSLYQGMQIH 333
M +R ++ D + ++ L + +
Sbjct: 217 MPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLF 276
Query: 334 SYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ ++ + + N LQ Q+ ++F+ ML +P+ +TF + AC+ +A L
Sbjct: 277 DKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLS 336
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G Q+H I KT D F+ + LM++Y KCG + AR++F+ ++ DV+SW+ +I YA
Sbjct: 337 EGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYA 396
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G G EA+ L+ +M+ G +PN VT VG+L+ACSH GLV+EGL+++ M + I
Sbjct: 397 HHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRD 456
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E +C++DL +RAGR+ +A+ I+ + + VW +LL C +HGN +G AA N+L+
Sbjct: 457 EHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLE 516
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+P N+ LLCNIYAS+GKW+E A++ M +RG++K PG SWIE++ K+H
Sbjct: 517 AEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVH 569
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 177/377 (46%), Gaps = 44/377 (11%)
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEME 271
H+ N +A R+ DA +F +D+ SW +++ +++ L AR +F+ +
Sbjct: 34 HVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPD 93
Query: 272 S-PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP---------------------D 309
+ N+ +W +++G A +EA +LF M +R ++ D
Sbjct: 94 ARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFD 153
Query: 310 GLTVRS------LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFR-L 362
G+ VR LL A ++ + ++ + ++ + + I + + + R L
Sbjct: 154 GMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARAL 213
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M + + +++N ++ A ++ + H MK D+ N ++ +++
Sbjct: 214 FDGM----PERNVVSWNAMISGYARNHRID---EAHDLFMKMP-TRDIASWNIMITGFIQ 265
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
L A++LF+ M +V++W++++ GY Q E AL++F M G+RPN VT +G
Sbjct: 266 DRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGA 325
Query: 483 LTACSHVGLVEEGLQLYRIM-QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+ ACS++ + EG Q+++++ + + E S +++L A+ G + A + ++ +
Sbjct: 326 VDACSNLAGLSEGQQVHQMICKTSFQFDTFIE--STLMNLYAKCGEIRLARKVFD-LSKE 382
Query: 542 DDIVVWKSLLASCKTHG 558
D++ W ++A+ HG
Sbjct: 383 KDVISWNGMIAAYAHHG 399
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 28/283 (9%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQN---NTNFRI---------RPS--TYADLISACSSLR 94
DLF + ++N+ + +LQ+ T +I RP+ T+ + ACS+L
Sbjct: 274 DLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLA 333
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
L G++VH I + Q D + + ++N+Y KCG + AR VFD +++V+SW MIA
Sbjct: 334 GLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIA 393
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE--- 211
+ +G AI LY +M + G P+ T+ ++ ACS V G ++ +++K
Sbjct: 394 AYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIA 453
Query: 212 -HGSHLISQNALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSMIDG------FSKLDFA 263
H LI + ++ R+ DA + + T W +++ G S D A
Sbjct: 454 VRDEHY---TCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLA 510
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
E E N ++ + AS EA + SEM DR L
Sbjct: 511 ARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGL 553
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 302/599 (50%), Gaps = 70/599 (11%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
E+ + L + + ++ +++ + ACS + GR++H ++ D + +
Sbjct: 753 ESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSL 812
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
L+MY KCG + +A VF + + + W AM+A +N +A+EL+ M Q ++PD
Sbjct: 813 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDS 872
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
FT ++I CS G+ +HA + K S ++AL+ +Y+K DA+ VF S
Sbjct: 873 FTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKS 932
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA--NEAMSLFS 299
+ KD+ +WGS+I G C N EA+ +F
Sbjct: 933 MEEKDMVAWGSLISGL------------------------------CKNGKFKEALKVFG 962
Query: 300 EMGDRE--LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI------ 351
+M D + L PD + S++ AC +L G+Q+H +IK G NV V +++
Sbjct: 963 DMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSK 1022
Query: 352 --LQHQAGELF----------------------------RLFSLMLASQTKPDHITFNDV 381
L A ++F LF+LML+ PD ++ V
Sbjct: 1023 CGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSV 1082
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ A ++ ASL G LH Y ++ G+ D + N L+DMYVKCG A +F M+ +
Sbjct: 1083 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 1142
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
++W+ +I GY G AL LF ++ +G P+ VT + +++AC+H G VEEG + I
Sbjct: 1143 ITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEI 1202
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M+ +YGI P E + +VDLL RAGR+ EA FI M + D +W LL++ +TH NV+
Sbjct: 1203 MKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVE 1262
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+G +AE +L+++P + V L N+Y +G E A+L+G MKERG++K PG SWIE+
Sbjct: 1263 LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEV 1321
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 237/555 (42%), Gaps = 84/555 (15%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR-NVVSWTAMIAGCS 157
G+++H ++L + D+ L +++MY K G DA VF E+ + NVV W MI G
Sbjct: 688 GKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFG 747
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLI 217
+ +++ELY+ + + +F + ACS GRQ+H V+K +
Sbjct: 748 GSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPY 807
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS 277
+L++MY+K + +A VFS + K L
Sbjct: 808 VSTSLLSMYSKCGMVGEAETVFSCVVDK----------------------------RLEI 839
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-GMQIHSYI 336
WN ++A N A+ LF M + ++PD T+ +++ +C S LY G +H+ +
Sbjct: 840 WNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVI-SCCSMFGLYDYGKSVHAEL 898
Query: 337 IKKGFYSNVPVCNAIL------------------------------------QHQAGELF 360
K+ S + +A+L + E
Sbjct: 899 FKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 958
Query: 361 RLFSLMLASQT--KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
++F M KPD V+ ACA + +L G Q+H ++KTG L+VFV + L+D
Sbjct: 959 KVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLID 1018
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
+Y KCG A ++F M ++V+W+S+I Y++ E +++LF M S G+ P+ V+
Sbjct: 1019 LYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVS 1078
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ VL A S + +G L+ GI ++ ++D+ + G AE+ +M
Sbjct: 1079 ITSVLVAISSTASLLKGKSLHGYTL-RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 1137
Query: 539 AFDDDIVVWKSLLASCKTHGN-------VDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
++ W ++ +HG+ D K+A E D +L+ CN S
Sbjct: 1138 Q-HKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGET---PDDVTFLSLISACN---HS 1190
Query: 592 GKWEEVARLMGSMKE 606
G EE MK+
Sbjct: 1191 GFVEEGKNFFEIMKQ 1205
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 231/507 (45%), Gaps = 41/507 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+ ACSSL +L G+ +H I+ + D + ++NMY KCG L+ A VFD
Sbjct: 563 TFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 622
Query: 142 PQ-----RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
Q R+V +MI G + + + + +ML G+ PD F+ ++ S LC
Sbjct: 623 SQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVV---SVLCK 679
Query: 197 VGL-----GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK-DITSW 250
G G+Q+H +++++ + ALI MY KF DAW VF I K ++ W
Sbjct: 680 EGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLW 739
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTI-------IAGVASCSNANEAMSLFSEMGD 303
MI GF + + +E LA N++ + +CS + S F
Sbjct: 740 NVMIVGFGGSEICES---SLELYMLAKSNSVKLVSTSFTGALGACSQSEN--SAFGRQIH 794
Query: 304 RELIPDGLTVRSLLCACTSPLSLY-------QGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
+++ GL + TS LS+Y + + S ++ K + A +++
Sbjct: 795 CDVVKMGLDNDPYV--STSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDN 852
Query: 357 G-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
G LF M PD T ++V+ C+ + G +H + K + + +
Sbjct: 853 GYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESA 912
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR--SSGVR 473
L+ +Y KCG A +F ME+ D+V+W SLI G + G +EALK+F M+ ++
Sbjct: 913 LLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 972
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
P+ + V+ AC+ + + GLQ++ M + G + S ++DL ++ G A
Sbjct: 973 PDSDIMTSVINACAGLEALSFGLQVHGSMI-KTGQVLNVFVGSSLIDLYSKCGLPEMALK 1031
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNV 560
M ++IV W S++ SC + N+
Sbjct: 1032 VFTSMR-PENIVAWNSMI-SCYSRNNL 1056
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 180/433 (41%), Gaps = 74/433 (17%)
Query: 50 LFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
L S LCK + EAL F D ++ + + +I+AC+ L +L G +VH ++
Sbjct: 944 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIK 1003
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
+ + + + ++++Y KCG E A VF M N+V+W +MI+ S+N +IEL
Sbjct: 1004 TGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIEL 1063
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ ML G+ PD + S++ A S + G+ LH + ++ S +NALI MY K
Sbjct: 1064 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVK 1123
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
A N+F + K + +W MI G+ RT
Sbjct: 1124 CGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRT----------------------- 1160
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------- 341
A+SLF E+ PD +T SL+ AC + +G I+K+ +
Sbjct: 1161 -----ALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFE-IMKQDYGIEPKME 1214
Query: 342 -YSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
Y+N+ L +AG L +S + A T+ D + ++ A ++E+G
Sbjct: 1215 HYANM----VDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELG------ 1264
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ SA +L ME ++ LI Y + G EA
Sbjct: 1265 -------------------------ILSAEKLLR-MEPERGSTYVQLINLYMEAGLKNEA 1298
Query: 461 LKLFRRMRSSGVR 473
KL M+ G++
Sbjct: 1299 AKLLGEMKERGLQ 1311
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 211/533 (39%), Gaps = 104/533 (19%)
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGK------------CGSLEDARMVFDEMPQRN 145
L R ++ I+ ++C+ + N Y + CG D R ++ R
Sbjct: 454 LTRNINVSIVKTRCRFKIQVKRFTTNAYQQKSKPSLEIKIVFCGDDADMRFKLHDVHIRR 513
Query: 146 VVSWTA--MIAGCSQNGQENAAIEL--YVQMLQ--------SGLMPDQFTFGSIIRACSG 193
+S A I+ S N A I+ Y+Q L S L FTF S+++ACS
Sbjct: 514 RLSRLADSYISPASVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSS 573
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK---FD---RILDAWNVFSSIARKDI 247
L + G+ +H +I +L+ MY K D ++ D W+ S ++ +D+
Sbjct: 574 LTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQ-SGVSARDV 632
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
T SMIDG+ K F R E + F M +
Sbjct: 633 TVCNSMIDGYFK--FRR--------------------------FKEGVGCFRRMLVLGVR 664
Query: 308 PDGLT---VRSLLCACTSPLSLYQGMQIHSYIIKKGF----------------------- 341
PD + V S+LC G QIH Y+++
Sbjct: 665 PDAFSLSIVVSVLCK-EGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDA 723
Query: 342 ---------YSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAA 387
SNV + N ++ G L+ L ++ K +F +GAC+
Sbjct: 724 WRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQ 783
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ G Q+HC ++K GL D +V L+ MY KCG +G A +F+ + D + W+++
Sbjct: 784 SENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAM 843
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY 506
+ Y + G AL+LF MR V P+ TL V++ CS GL + G ++ + +
Sbjct: 844 VAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPI 903
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
P E S ++ L ++ G +A M + D+V W SL++ +G
Sbjct: 904 QSTPAIE--SALLTLYSKCGCDTDAYLVFKSME-EKDMVAWGSLISGLCKNGK 953
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 301/560 (53%), Gaps = 64/560 (11%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC 128
F + + + +TY ++IS S+ L GRK+H I+++ D V+ ++NMYGKC
Sbjct: 196 FKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKC 255
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
GS +AR VFD+M +R++VSW MI NG + A+ELY ++ G + TF SI+
Sbjct: 256 GSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSIL 315
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
ACS + + GR +H+H+++ S + AL+ MY K
Sbjct: 316 GACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC------------------- 356
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS---CSNANEAMSLFSEMGDRE 305
L+ AR VFN M++ + +W+T+I AS +A +A +F +G R+
Sbjct: 357 ---------GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSL 365
I + M I +Y+ N A+ ++FR +
Sbjct: 408 TIS------------------WNAM-ITTYV------QNGCAVAAM------KIFR--EM 434
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
A+ KPD +TF V+ ACA++ L LH I ++ L +V V N L++MY +CGS
Sbjct: 435 TGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGS 494
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L A LF ++ VVSW++++ ++Q+G EAL LF+ M GV+P+ VT +L
Sbjct: 495 LEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFV 554
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C+H G +E+G + + M + + PT + + +VDLL R+GR+ +A++ + M F+ D V
Sbjct: 555 CTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPV 614
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
W + L +C+ HG +++G+ AAE + ++DP+++A + + NIYA+ G WE+VA + M+
Sbjct: 615 AWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKME 674
Query: 606 ERGVRKVPGQSWIEIQTKIH 625
ERG++K+PG S+IE+ K+H
Sbjct: 675 ERGLKKLPGLSFIEVDGKLH 694
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 287/579 (49%), Gaps = 68/579 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +CSS + GR +H+ I S+ + D ++ N +++MYGKC SL DAR VF+ M
Sbjct: 9 TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 142 P--QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
QRNVVSW AMIA +QNG A+ LY +M GL D TF S++ ACS L
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL---AQ 125
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR++H V S S NAL+ MY +F + DA +F S+ +D TSW ++I S+
Sbjct: 126 GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQ 185
Query: 260 ---LDFARTVFNEME---SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
A +F EM+ PN ++ +I+G ++ E + +E+ D +
Sbjct: 186 SGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVA 245
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQ---HQAGELFRLFSLMLAS 369
+L+ S ++ ++ + K+ S NV + +L H+A EL++ +
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFK 305
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+TK TF ++GAC+++ +L G +H +I++ GL +V V L++MY KCGSL A
Sbjct: 306 RTKA---TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEA 362
Query: 430 RELFNFMEDPDVVSWSSLIVGYA----------------------------------QFG 455
R++FN M++ D V+WS+LI YA Q G
Sbjct: 363 RKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNG 422
Query: 456 CGEEALKLFRRMR-SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPT 511
C A+K+FR M ++G++P+ VT + VL AC+ +G + E L+ + E ++ T
Sbjct: 423 CAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVT 482
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAA 567
+ ++++ AR G + EAE A + +V W +++A+ +G +D+ +
Sbjct: 483 ----NTLINMYARCGSLEEAERLF-AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD 537
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
+K D +++ +C G E+ R M E
Sbjct: 538 LEGVKPDDVTYTSILFVCT---HGGSLEQGWRYFTDMAE 573
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 202/449 (44%), Gaps = 66/449 (14%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD TF +++ +CS V GR LH + S + NALI+MY K D ++DA +V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F S+ + N+ SWN +IA A ++ EA+ L+
Sbjct: 65 FESM--------------------------DWRQRNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-- 356
M + L D +T S+L AC+ SL QG +IH+ + G S + NA++ A
Sbjct: 99 WRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 357 ---GELFRLF-SLMLASQT-----------------------------KPDHITFNDVMG 383
G+ R+F SL +T KP+ T+ +V+
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVIS 215
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+ L G ++H I+ G D+ V L++MY KCGS ARE+F+ M+ D+VS
Sbjct: 216 GFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS 275
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+ +I Y G EAL+L++++ G + T V +L ACS V + +G +L
Sbjct: 276 WNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHI 334
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
E G+ + +V++ A+ G + EA N M + D V W +L+ + ++G
Sbjct: 335 LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDA 393
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSG 592
++A + ++ ++ + + Y +G
Sbjct: 394 RKARKVFDRLGSRDTISWNAMITTYVQNG 422
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 9/191 (4%)
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+PD++TF V+ +C++ + G LH I + D V N L+ MY KC SL AR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 432 LFNFME--DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+F M+ +VVSW+++I YAQ G EAL L+ RM G+ +HVT V VL ACS +
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 490 GLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+G +++ R+ + G+ + + +V + AR G V +A+ + D+ W
Sbjct: 124 A---QGREIHNRVFYS--GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDE-TSWN 177
Query: 549 SLLASCKTHGN 559
+++ + G+
Sbjct: 178 AVILAHSQSGD 188
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 199/650 (30%), Positives = 332/650 (51%), Gaps = 80/650 (12%)
Query: 32 GEVVDSFLRRFDDIWD-FDLFSSLCKQNLYNEALV------------AFDFLQNNTNFRI 78
G + S L RF + W + +F+ + ++++++ ++ A D +
Sbjct: 132 GNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGV 191
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP T+ ++ +C + ++GR+VH H+L + + N ++ MY KCG + AR
Sbjct: 192 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARK 251
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD M + +SW AMIAG +NG+ NA +EL++ MLQ + P+ T S+ A L
Sbjct: 252 VFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSD 311
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ +++H +K + + N+LI MY
Sbjct: 312 ITFAKEMHGLAVKRGFATDVAFCNSLIQMYASL--------------------------- 344
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+ ARTVF+ M++ + SW +I+G ++A+ +++ M + PD +T+ S
Sbjct: 345 -GMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASA 403
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L AC SL G+++H KGF S V V NA+L+
Sbjct: 404 LAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDV 463
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
H+ E F MLA KP+ +TF + ACAA +L G ++H +
Sbjct: 464 VSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAH 522
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+++ G+A + ++ N L+D+YVKCG G A F DVVSW+ +I G+ G GE A
Sbjct: 523 VLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETA 582
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L F +M G P+ VT V +L ACS G+V EG +L+ M ++Y I+P + +C+VD
Sbjct: 583 LSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVD 642
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL+R G++ EA +FIN+M D VW +LL C+ H +V++G+ AA+ +L+++P ++
Sbjct: 643 LLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGY 702
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
VLLC++YA +G W+++AR+ +M+E+G+ G SW+E++ +HA D
Sbjct: 703 HVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTD 752
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 240/547 (43%), Gaps = 79/547 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y L C R+++ G + H L N +L+M + G A VF +M
Sbjct: 96 AYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKM 155
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+V SW M+ G + G A++LY +M+ +G+ PD +TF ++R+C G+ +GR
Sbjct: 156 PERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGR 215
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++HAHV++ + NAL+ MY K ++ A VF S+A D SW
Sbjct: 216 EVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISW----------- 264
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N +IAG N + LF M E+ P+ +T+ S+ A
Sbjct: 265 -----------------NAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASG 307
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELF------------- 360
+ ++H +K+GF ++V CN+++Q QA +F
Sbjct: 308 LLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTA 367
Query: 361 ---------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+++LM + PD IT + ACA + SL++G +LH G
Sbjct: 368 MISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG 427
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
V V N L++MY K + A E+F M + DVVSWSS+I G+ EAL FR
Sbjct: 428 FMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFR 487
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGIIPTRERRSCVVDL 521
M + V+PN VT + L AC+ G + G +++ R G +P + ++DL
Sbjct: 488 HMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLP-----NALIDL 541
Query: 522 LARAGRVHEA-EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID--PTNS 578
+ G+ A F A D+V W ++A HGN + ++KI P
Sbjct: 542 YVKCGQTGYAWAQFCAHGA--KDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEV 599
Query: 579 AALVLLC 585
+ LLC
Sbjct: 600 TFVALLC 606
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 270/493 (54%), Gaps = 39/493 (7%)
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCC 196
F +M NV + AMI G G A++ YV ML+ S ++P +TF S+++AC+ +C
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 250
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V LG+ +H H+ K SHL Q AL+ Y+K + + +A VF + +D +W +M+
Sbjct: 251 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSA 310
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ +D AR +F EM N A+WNT+I G A N A LF++M +++I
Sbjct: 311 LARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIIS----- 365
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKP 373
+ + C S YQ + ++S M + P
Sbjct: 366 WTTMITCYSQNKQYQ-----------------------------DALAIYSEMRLNGIIP 396
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D +T + V ACA + +LE+G ++H Y+M GL LDV++ + L+DMY KCGSL + +F
Sbjct: 397 DEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIF 456
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ D ++ W+++I G A G E+AL++F M + PN VT + +L+AC+H GLV+
Sbjct: 457 FKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVD 516
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
EG + M +Y I P C+VD+L+++G ++EA + I M F+ + ++W +LL
Sbjct: 517 EGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNG 576
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV-RKV 612
CK HGN ++ + A E ++ ++P NS LL ++YA W EVA + MKE+GV +K
Sbjct: 577 CKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKY 636
Query: 613 PGQSWIEIQTKIH 625
PG SWIE++ IH
Sbjct: 637 PGSSWIELEGTIH 649
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 164/356 (46%), Gaps = 57/356 (16%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
D +S L + +EA FD + F + ++SA + + + RK+ + +
Sbjct: 278 DFYSKL---EILSEARKVFDEMCERDAF-----AWTAMVSALARVGDMDSARKLFEEM-- 327
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
+ + N +++ Y + G++E A ++F++MP ++++SWT MI SQN Q A+ +
Sbjct: 328 --PERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAI 385
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
Y +M +G++PD+ T ++ AC+ + + LG+++H +V+ + +AL+ MY K
Sbjct: 386 YSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAK 445
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
GS+ D + +F ++ NL WN +I G+A
Sbjct: 446 ---------------------CGSL-------DLSLLIFFKLTDKNLYCWNAVIEGLAVH 477
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP----------LSLYQGMQIHSYIIK 338
A +A+ +F+ M +++P+G+T S+L ACT LS+ + I I
Sbjct: 478 GYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRH 537
Query: 339 KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
G C + ++G L L+ + + +P+ I + ++ C + E+
Sbjct: 538 YG-------CMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIA 586
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 175/426 (41%), Gaps = 105/426 (24%)
Query: 63 ALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
AL + + +N T++ L+ AC+ + +++LG+ VH HI + + ++
Sbjct: 218 ALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALV 277
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+ Y K L +AR VFDEM +R+ +WTAM++ ++ G ++A +L+ + MP++
Sbjct: 278 DFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEE------MPERN 331
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T + N +I Y + + A +F+ +
Sbjct: 332 T---------------------------------ATWNTMIDGYARLGNVESAELLFNQM 358
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
KDI SW +MI +S+ +A++++SEM
Sbjct: 359 PTKDIISWTTMITCYSQ----------------------------NKQYQDALAIYSEMR 390
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL- 359
+IPD +T+ ++ AC +L G +IH Y++ +G +V + +A++ A G L
Sbjct: 391 LNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLD 450
Query: 360 ---------------------------------FRLFSLMLASQTKPDHITFNDVMGACA 386
R+F++M + P+ +TF ++ AC
Sbjct: 451 LSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACT 510
Query: 387 AMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSW 444
++ G ++ + D+ ++DM K G L A EL ME +P+ + W
Sbjct: 511 HAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIW 570
Query: 445 SSLIVG 450
+L+ G
Sbjct: 571 GALLNG 576
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 291/555 (52%), Gaps = 45/555 (8%)
Query: 79 RPS---TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
RPS T + I CS++ L + ++ + D L + ++ S+
Sbjct: 35 RPSFKQTLLNRIKNCSTINELH---GLCASMIKTNAIQDCFLVHQFISASFALNSVHYPV 91
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGL 194
F +M NV + AMI G G A++ YV ML+ S ++P +TF S+++AC+ +
Sbjct: 92 FAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFM 151
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
C V LG+ +H H+ K SHL Q AL+ Y+K + + +A VF + +D +W +M+
Sbjct: 152 CAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAML 211
Query: 255 DGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
++ +D AR +F EM N A+WNT+I G N A LF++M +++I
Sbjct: 212 SALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIIS--- 268
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQT 371
+ + C S YQ + ++S M +
Sbjct: 269 --WTTMITCYSQNKQYQ-----------------------------DALAIYSEMRLNGI 297
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
PD +T + V ACA + +LE+G ++H Y+M GL LDV++ + L+DMY KCGSL +
Sbjct: 298 IPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLL 357
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
+F + D ++ W+++I G A G E+AL++F M + PN VT + +L+AC+H GL
Sbjct: 358 IFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGL 417
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
V+EG + M +Y I P C+VD+L+++G ++EA + I M F+ + ++W +LL
Sbjct: 418 VDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALL 477
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV-R 610
CK HGN ++ + A E ++ ++P NS LL ++YA W EVA + MKE+GV +
Sbjct: 478 NGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEK 537
Query: 611 KVPGQSWIEIQTKIH 625
K PG SWIE++ IH
Sbjct: 538 KYPGSSWIELEGTIH 552
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 164/356 (46%), Gaps = 57/356 (16%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
D +S L + +EA FD + F + ++SA + + + RK+ + +
Sbjct: 181 DFYSKL---EILSEARKVFDEMCERDAF-----AWTAMLSALARVGDMDSARKLFEEM-- 230
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
+ + N +++ Y + G++E A ++F++MP ++++SWT MI SQN Q A+ +
Sbjct: 231 --PERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAI 288
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
Y +M +G++PD+ T ++ AC+ + + LG+++H +V+ + +AL+ MY K
Sbjct: 289 YSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAK 348
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
GS+ D + +F ++ NL WN +I G+A
Sbjct: 349 ---------------------CGSL-------DLSLLIFFKLTDKNLYCWNAVIEGLAVH 380
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP----------LSLYQGMQIHSYIIK 338
A +A+ +F+ M +++P+G+T S+L ACT LS+ + I I
Sbjct: 381 GYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRH 440
Query: 339 KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
G C + ++G L L+ + + +P+ I + ++ C + E+
Sbjct: 441 YG-------CMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIA 489
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 176/426 (41%), Gaps = 105/426 (24%)
Query: 63 ALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
AL + + +N T++ L+ AC+ + +++LG+ VH HI + + ++
Sbjct: 121 ALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALV 180
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+ Y K L +AR VFDEM +R+ +WTAM++ ++ G ++A +L+ + MP++
Sbjct: 181 DFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEE------MPERN 234
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T + N +I YT+ + A +F+ +
Sbjct: 235 T---------------------------------ATWNTMIDGYTRLGNVESAELLFNQM 261
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
KDI SW +MI +S+ +A++++SEM
Sbjct: 262 PTKDIISWTTMITCYSQ----------------------------NKQYQDALAIYSEMR 293
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL- 359
+IPD +T+ ++ AC +L G +IH Y++ +G +V + +A++ A G L
Sbjct: 294 LNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLD 353
Query: 360 ---------------------------------FRLFSLMLASQTKPDHITFNDVMGACA 386
R+F++M + P+ +TF ++ AC
Sbjct: 354 LSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACT 413
Query: 387 AMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSW 444
++ G ++ + D+ ++DM K G L A EL ME +P+ + W
Sbjct: 414 HAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIW 473
Query: 445 SSLIVG 450
+L+ G
Sbjct: 474 GALLNG 479
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 305/584 (52%), Gaps = 47/584 (8%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDARMVFDEMPQ 143
L+S C +L++L +++H I+ + + ++ G L A +F +
Sbjct: 34 LLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN 90
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
N V W MI G S + A+E YV M+ SG P+++TF SI ++C+ + G+Q+
Sbjct: 91 PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---L 260
HAHV+K + +LI MY + +++A VF + +D S+ ++I G++ L
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
D AR +F+E+ ++ SWN +I+G A EAM+ F EM ++ P+ T+ S+L AC
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270
Query: 321 T-SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---------- 361
S SL G + S+I +G SN+ + N ++ +A LF
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSW 330
Query: 362 ------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
LF M+ S P+ +TF ++ ACA + +L++G +H Y+ K
Sbjct: 331 NVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDK 390
Query: 404 TGLALD--VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ V + L+DMY KCG L A+ +F+ M + +W+++I G+A G + AL
Sbjct: 391 NMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTAL 450
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF RM S G P+ +T VGVLTAC H GL+ G + + M +Y + P C++DL
Sbjct: 451 GLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDL 510
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
RAG EAE + M D +W SLL +C+ H +++ + A+++ +++P N +A
Sbjct: 511 FGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAY 570
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL NIYA +G+WE+VA++ + + ++KVPG S IE+ + +H
Sbjct: 571 VLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVH 614
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 180/379 (47%), Gaps = 46/379 (12%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYA 84
LD+A E+ D R W+ + S + EA+ F+ ++ ++ P ST
Sbjct: 209 FLDEARELFDEIPVRDVVSWN-AMISGYAQSGRVEEAMAFFEEMRRA---KVTPNVSTML 264
Query: 85 DLISACS-SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++SAC+ S SLQLG V I + L N +++MY KCG LE+A +F+++
Sbjct: 265 SVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQD 324
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+NVVSW MI G + A+ L+ +M+QS + P+ TF SI+ AC+ L + LG+ +
Sbjct: 325 KNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWV 384
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---L 260
HA+V K+ + S +A+ W S+ID ++K L
Sbjct: 385 HAYVDKN-----MKSMKNTVAL------------------------WTSLIDMYAKCGDL 415
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A+ +F+ M + +LA+WN +I+G A + + A+ LFS M +PD +T +L AC
Sbjct: 416 AVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTAC 475
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDH 375
L G + S +I+ Y P C L +AG +L+ + KPD
Sbjct: 476 KHAGLLSLGRRYFSSMIQD--YKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDG 533
Query: 376 ITFNDVMGACAAMASLEMG 394
+ ++GAC +E+
Sbjct: 534 AIWCSLLGACRIHRRIELA 552
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 183/439 (41%), Gaps = 100/439 (22%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV---- 137
T+ + +C+ +R G++VH H+L + +A +H ++NMY + G L +AR+V
Sbjct: 130 TFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKS 189
Query: 138 ---------------------------FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
FDE+P R+VVSW AMI+G +Q+G+ A+ +
Sbjct: 190 SMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFE 249
Query: 171 QMLQSGLMPDQFTFGSIIRACS-GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M ++ + P+ T S++ AC+ + LG + + + GS++ N LI MY K
Sbjct: 250 EMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKC 309
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ +A N+F I K++ SW MI G++ + SC
Sbjct: 310 GDLEEASNLFEKIQDKNVVSWNVMIGGYTHM--------------------------SC- 342
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK--KGFYSNVPV 347
EA+ LF M + P+ +T S+L AC + +L G +H+Y+ K K + V +
Sbjct: 343 -YKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVAL 401
Query: 348 CNAILQHQA--GEL----------------------------------FRLFSLMLASQT 371
+++ A G+L LFS M +
Sbjct: 402 WTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGF 461
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM-DMYVKCGSLGSAR 430
PD ITF V+ AC L +G + +++ G M D++ + G A
Sbjct: 462 VPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAE 521
Query: 431 ELFNFME-DPDVVSWSSLI 448
L ME PD W SL+
Sbjct: 522 TLVKNMEMKPDGAIWCSLL 540
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/549 (33%), Positives = 297/549 (54%), Gaps = 66/549 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+++C+ L SL+ G +VH HI+ + D + N ++++Y G+L AR +FDE
Sbjct: 113 TFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDES 172
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R++VS+ MI G ++ Q +A+ L+ +M SG++PD+FTF ++ CS L +G+
Sbjct: 173 LVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGK 232
Query: 202 QLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
Q+HA V K+ S+++ ++A++ MY K I A VFS++
Sbjct: 233 QIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMG---------------- 276
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
S + A+W++++ G A C N A LF+ M +R++I
Sbjct: 277 -----------TSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVI------------ 313
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
S+ YS C+ L+ LF M A KPD +T
Sbjct: 314 --------------SWTAMISGYSQAGQCSEALE--------LFKEMEALGIKPDEVTLV 351
Query: 380 DVMGACAAMASLEMGTQL-HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ ACA + + ++G +L H YI + + +MDMY KCGS+ SA E+F +
Sbjct: 352 AVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGK 411
Query: 439 --PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
++S+I G AQ G GE A+ +FR + S+G++P+ VT VGVL AC H GL+EEG
Sbjct: 412 NMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGK 471
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+L+ M N YGI P E C+VDLL R G + EA D + +M F+ + V+W++LL++C+T
Sbjct: 472 KLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRT 531
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
HGNV +G+ A + +L+++ + A VLL NI A + +WEE ++ M++ G+RK PG S
Sbjct: 532 HGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWS 591
Query: 617 WIEIQTKIH 625
+IE+ IH
Sbjct: 592 YIELGGAIH 600
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 244/530 (46%), Gaps = 87/530 (16%)
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS---LEDARMVFDEMPQRNVVS 148
S +S + G ++H + + + +++ + GS L+ +R++F ++ N+
Sbjct: 18 SCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFM 77
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
W MI G S++ AI LY+ M+ G+ P+ FTF ++ +C+ L + G ++H+H+
Sbjct: 78 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 137
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
IK S L +NALI +Y+ F + A +F +D+ S+ +MI G++++
Sbjct: 138 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEV------- 190
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
N+ ES A+ LF EM + ++PD T +L C+
Sbjct: 191 NQPES---------------------ALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPN 229
Query: 328 QGMQIHSYIIK--KGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHITFND 380
G QIH+ + K + SN+ + +AI+ A R+FS M S++
Sbjct: 230 VGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKS--------- 280
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
AA +S+ G Y +CG + AR+LFN M + D
Sbjct: 281 ----AAAWSSMVCG-------------------------YARCGEINVARKLFNHMHERD 311
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
V+SW+++I GY+Q G EAL+LF+ M + G++P+ VTLV VL+AC+ +G + G +LY
Sbjct: 312 VISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYH 371
Query: 501 IMQNEYGIIPTRE-RRSCVVDLLARAGRVHEAEDFINQMAFDDDI-VVWKSLLASCKTHG 558
E G+ + V+D+ A+ G + A + ++ + V+ S++A HG
Sbjct: 372 -QYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHG 430
Query: 559 ----NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
+ V + LK D ++ C SG EE +L SM
Sbjct: 431 LGETAITVFRELISTGLKPDEVTFVGVLCAC---GHSGLIEEGKKLFESM 477
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 202/639 (31%), Positives = 322/639 (50%), Gaps = 70/639 (10%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A V D +R +W+ + K +N A+ F ++ + + + TY ++S C
Sbjct: 199 ARRVFDELPQRDTILWNV-MLHGYVKSGDFNNAMGTFCGMRTSYSM-VNSVTYTCILSIC 256
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
++ LG +VH ++ S + D + N ++ MY KCG+L DAR +F+ MPQ + V+W
Sbjct: 257 ATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWN 316
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
+IAG QNG + A L+ M+ +G+ PD TF S + + + +++H+++++
Sbjct: 317 GLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRH 376
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
+ ++ALI +Y K + A +F D+ +MI G+ +
Sbjct: 377 RVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYV-----------L 425
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
N+ + NT F + ++P+ LT+ S+L AC + +L G
Sbjct: 426 HGLNIDAINT-----------------FRWLIQEGMVPNSLTMASVLPACAALAALKLGK 468
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQAG--------ELFR--------------------- 361
++H I+KK + V V +AI A E FR
Sbjct: 469 ELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNG 528
Query: 362 -------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
LF M S K D ++ + + + A + +L G ++H Y+++ + D FV +
Sbjct: 529 KPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVAS 588
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
L+DMY KCG L AR +FN M + VSW+S+I Y GC E L LF M +GV P
Sbjct: 589 ALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHP 648
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
+HVT + +++AC H GLV EG+ + M EYGI E +C+VDL RAGR+HEA D
Sbjct: 649 DHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDA 708
Query: 535 INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKW 594
I M F D VW +LL +C+ HGNV++ K A+ ++L++DP NS VLL N++A +G+W
Sbjct: 709 IKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEW 768
Query: 595 EEVARLMGSMKERGVRKVPGQSWIEIQTKIH----ASGN 629
V ++ MKE+GV+K+PG SWI++ H A GN
Sbjct: 769 GSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGN 807
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/529 (27%), Positives = 241/529 (45%), Gaps = 68/529 (12%)
Query: 67 FDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYG 126
F F +N T+ +I AC L ++ L VH+ S D + + ++ +Y
Sbjct: 132 FYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYA 191
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
G + DAR VFDE+PQR+ + W M+ G ++G N A+ + M S M + T+
Sbjct: 192 DNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTC 251
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
I+ C+ LG Q+H VI S N L+AMY+K + DA +F+++ + D
Sbjct: 252 ILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTD 311
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
+W +I G+ + F +EA LF+ M +
Sbjct: 312 TVTWNGLIAGYVQNGF----------------------------TDEAAPLFNAMISAGV 343
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYII---------------------------KK 339
PD +T S L + SL ++HSYI+ +K
Sbjct: 344 KPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARK 403
Query: 340 GFYSN----VPVCNA-----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
F N V VC A +L + F ++ P+ +T V+ ACAA+A+
Sbjct: 404 IFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAA 463
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L++G +LHC I+K L V V + + DMY KCG L A E F M + D + W+S+I
Sbjct: 464 LKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISS 523
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGII 509
++Q G E A+ LFR+M SG + + V+L L++ +++ + G +++ +++N +
Sbjct: 524 FSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFS-- 581
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S ++D+ ++ G++ A N MA ++ V W S++A+ HG
Sbjct: 582 SDTFVASALIDMYSKCGKLALARCVFNLMAGKNE-VSWNSIIAAYGNHG 629
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 221/514 (42%), Gaps = 68/514 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L ACS +Q R+VH I+ L + +L +Y CG + D +F + N
Sbjct: 50 LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCN 109
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+ W MI G G + A+ Y +ML S + PD++TF +I+AC GL V L +H
Sbjct: 110 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHN 169
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
L +ALI +Y I DA VF + ++D W M+ G+ K
Sbjct: 170 TARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVK------ 223
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+ N AM F M + + +T +L C +
Sbjct: 224 ----------------------SGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGK 261
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELF----------------------- 360
G Q+H +I GF + V N + + + G LF
Sbjct: 262 FCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAG 321
Query: 361 -----------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
LF+ M+++ KPD +TF + + SL ++H YI++ + D
Sbjct: 322 YVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFD 381
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V++ + L+D+Y K G + AR++F DV +++I GY G +A+ FR +
Sbjct: 382 VYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ 441
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G+ PN +T+ VL AC+ + ++ G +L+ I++ + I S + D+ A+ GR+
Sbjct: 442 EGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVG--SAITDMYAKCGRL 499
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
A +F +M+ + D + W S+++S +G ++
Sbjct: 500 DLAYEFFRRMS-ETDSICWNSMISSFSQNGKPEM 532
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 170/419 (40%), Gaps = 79/419 (18%)
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
S+ RACS V RQ+H +I + ++ +Y RI D N+F
Sbjct: 49 SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFG---- 104
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+E N WN +I G+ + A+ + +M
Sbjct: 105 ------------------------LELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSN 140
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELF----- 360
+ PD T ++ AC ++ M +H+ GF+ ++ V +A+++ A +
Sbjct: 141 VSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDAR 200
Query: 361 RLF-----------SLMLASQTKP--------------------DHITFNDVMGACAAMA 389
R+F ++ML K + +T+ ++ CA
Sbjct: 201 RVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRG 260
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+GTQ+H ++ +G D V N L+ MY KCG+L AR+LFN M D V+W+ LI
Sbjct: 261 KFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIA 320
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC------SHVGLVEEGLQLYRIMQ 503
GY Q G +EA LF M S+GV+P+ VT L + H V + +R+
Sbjct: 321 GYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF 380
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG-NVD 561
+ Y +S ++D+ + G V A Q D+ V ++++ HG N+D
Sbjct: 381 DVY-------LKSALIDIYFKGGDVEMARKIFQQNTL-VDVAVCTAMISGYVLHGLNID 431
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 110/251 (43%), Gaps = 17/251 (6%)
Query: 352 LQHQAGELFRLFSLMLASQTKPDHIT--FNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
L H AG + + +++ D++T + AC+ + ++ Q+H I+ G++
Sbjct: 21 LMHTAGT--SICNNVMSKPETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDV 78
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
+ + ++ +YV CG + LF +E + + W+ +I G G + AL + +M
Sbjct: 79 CALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLG 138
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
S V P+ T V+ AC + V + ++ ++ G S ++ L A G +
Sbjct: 139 SNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARS-LGFHVDLFVGSALIKLYADNGYIC 197
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVD------VGKRAAENILKIDPTNSAALVL 583
+A +++ D ++W +L G+ + G R + +++ NS
Sbjct: 198 DARRVFDELP-QRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV-----NSVTYTC 251
Query: 584 LCNIYASSGKW 594
+ +I A+ GK+
Sbjct: 252 ILSICATRGKF 262
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 299/592 (50%), Gaps = 70/592 (11%)
Query: 73 NTNFRIRPSTYADLI-SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC--G 129
T+ + P LI C ++R L ++H H++ ++ + ++L
Sbjct: 16 KTSISLFPENPKTLILEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAILLPT 72
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
S++ A +F ++ + + ++ MI G + + AI L+ +M ++ + PD+FTF I++
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
CS L + G Q+HA ++K GSH +N LI MY
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYA---------------------- 170
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
+++ AR VF+EM N+ +WN++ AG N E + LF EM + ++ D
Sbjct: 171 ------NCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFD 224
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------ 357
+T+ S+L AC L G I+ Y+ +KG N + +++ A
Sbjct: 225 EVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFD 284
Query: 358 ------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
E LF M + P+ IT ++ +CA + +LE
Sbjct: 285 QMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALET 344
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G +H +I K + L V + LMD Y KCGS+ S+ E+F M +V+SW+ LI G A
Sbjct: 345 GKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLAS 404
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G G++AL+ F M V PN VT +GVL+ACSH GLV+EG L+ M ++GI P E
Sbjct: 405 NGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIE 464
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
C+VD+L RAG + EA FI M + V+W++LLASCK H NV++G+ + + ++ +
Sbjct: 465 HYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIIL 524
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+PT+S +LL NIYAS G+WE+ ++ G MKE+G++K PG S IE+ IH
Sbjct: 525 EPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIH 576
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 200/448 (44%), Gaps = 80/448 (17%)
Query: 61 NEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
+EA++ F + N+ ++P T+ ++ CS L++L G ++H I+ +
Sbjct: 106 HEAILLFKEMHENS---VQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVK 162
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++MY CG +E AR VFDEM +RNV +W +M AG +++G ++L+ +ML+ +
Sbjct: 163 NTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIR 222
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
D+ T S++ AC L + LG ++ +V + + +L+ MY K ++ A +
Sbjct: 223 FDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRL 282
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + R+D+ +W +MI G+S+ S EA+ LF
Sbjct: 283 FDQMDRRDVVAWSAMISGYSQ----------------------------ASRCREALDLF 314
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-------------GFYS-- 343
EM + P+ +T+ S+L +C +L G +H +I KK FY+
Sbjct: 315 HEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKC 374
Query: 344 -----------NVPVCNAI----------LQHQAGELFRLFSLMLASQTKPDHITFNDVM 382
+PV N + Q + F LML +P+ +TF V+
Sbjct: 375 GSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVL 434
Query: 383 GACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFMED--- 438
AC+ ++ G L + + G+ + ++D+ G G E F F+++
Sbjct: 435 SACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDIL---GRAGLIEEAFQFIKNMPI 491
Query: 439 -PDVVSWSSLIVG---YAQFGCGEEALK 462
P+ V W +L+ + GEE+LK
Sbjct: 492 QPNAVIWRTLLASCKVHKNVEIGEESLK 519
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 169/375 (45%), Gaps = 33/375 (8%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C ++ A V D R W+ +F+ K + E + F + + R T
Sbjct: 172 CGEVEVARRVFDEMSERNVRTWN-SMFAGYTKSGNWEEVVKLFHEMLE-LDIRFDEVTLV 229
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++AC L L+LG ++ ++ + + L +++MY KCG ++ AR +FD+M +R
Sbjct: 230 SVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRR 289
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+VV+W+AMI+G SQ + A++L+ +M ++ + P++ T SI+ +C+ L + G+ +H
Sbjct: 290 DVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVH 349
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ K + AL+ Y K + + VF + K++
Sbjct: 350 FFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVL---------------- 393
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
SW +I G+AS +A+ F M ++ + P+ +T +L AC+
Sbjct: 394 ------------SWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAG 441
Query: 325 SLYQGMQIHSYIIKK-GFYSNVPV--CNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
+ +G + + + G + C + +AG + F + +P+ + + +
Sbjct: 442 LVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTL 501
Query: 382 MGACAAMASLEMGTQ 396
+ +C ++E+G +
Sbjct: 502 LASCKVHKNVEIGEE 516
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 340/621 (54%), Gaps = 36/621 (5%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT-------NFRIRPS----- 81
+VD +++ + +F ++ K+N+ + ++Q+ FR+R
Sbjct: 145 LVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPN 204
Query: 82 --TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+A ++S +S + LGR+VH + C + N ++NMY KCG +E+AR+VF
Sbjct: 205 SVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFC 264
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M R++VSW ++AG NG + A++L+ S M Q T+ ++I+ C+ + +GL
Sbjct: 265 GMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGL 324
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDGF- 257
RQLH+ V+K S+ AL+ Y+K ++ +A ++F ++ +++ SW +MI+G
Sbjct: 325 ARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCI 384
Query: 258 --SKLDFARTVFNEME----SPNLASWNTII-AGVASCSNANEAMSLFSEMGDRELIPDG 310
+ A +F+ M +PN +++TI+ A VAS A + + ++
Sbjct: 385 QNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTA 444
Query: 311 LTVR-SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE---LFRLFSLM 366
L S LC LS+++ + + +S + C A QAG+ +F M
Sbjct: 445 LLASYSKLCNTEEALSIFKMIDQKDVV----SWSAMLTCYA----QAGDSDGATNIFIKM 496
Query: 367 LASQTKPDHITFNDVMGACAA-MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
KP+ T + V+ ACA+ A +++G Q H +K + V + L+ MY + GS
Sbjct: 497 TMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGS 556
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ SA+ +F D D+VSW+S++ GYAQ G ++AL +FR+M + G+ + VT + V+
Sbjct: 557 IESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMG 616
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C+H GLVEEG + + M +YGI PT E +C+VDL +RAG++ EA I M+F +
Sbjct: 617 CAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPM 676
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
VW++LL +CK H NV++GK AAE +L ++P +SA VLL NIY+++GKW+E + M
Sbjct: 677 VWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMD 736
Query: 606 ERGVRKVPGQSWIEIQTKIHA 626
+ V+K G SWI+I+ K+H+
Sbjct: 737 TKKVKKEAGCSWIQIKNKVHS 757
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 158/619 (25%), Positives = 273/619 (44%), Gaps = 102/619 (16%)
Query: 42 FDDI-----WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSL 96
FD+I D LF ++ ++AL F + R+ ++ C S+
Sbjct: 61 FDEIPHRNTLDHALFDH-ARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDR 119
Query: 97 QLGRKVHDHILSSKC---QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
LG+++H L +C + D + +++MY K S+ D R VF+ MP+RNVV+WT+++
Sbjct: 120 VLGKQLHG--LCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLL 177
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G Q+G + +EL+ +M G+ P+ TF S++ + V LGR++HA +K
Sbjct: 178 TGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCC 237
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
S + N+L+ MY K + +A VF + +D
Sbjct: 238 STVFVCNSLMNMYAKCGLVEEARVVFCGMETRD--------------------------- 270
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+ SWNT++AG+ + EA+ LF + + T +++ C + L Q+H
Sbjct: 271 -MVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLH 329
Query: 334 SYIIKKGFYSNVPVCNAILQH-----QAGELFRLFSLMLASQ------------------ 370
S ++K+GF+S V A++ Q G +F LM SQ
Sbjct: 330 SSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDV 389
Query: 371 --------------TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
P+ T++ ++ A++ASL Q+H ++KT V L
Sbjct: 390 PLAAALFSRMREDGVAPNDFTYSTIL--TASVASLP--PQIHAQVIKTNYECTSIVGTAL 445
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+ Y K + A +F ++ DVVSWS+++ YAQ G + A +F +M G++PN
Sbjct: 446 LASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNE 505
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER-------RSCVVDLLARAGRVH 529
T+ V+ AC+ G+ L R ++ I + R S +V + AR G +
Sbjct: 506 FTISSVIDACAS---PTAGVDLGR----QFHAISIKHRCHDALCVSSALVSMYARKGSIE 558
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLLC 585
A+ I + D D+V W S+L+ HG +DV ++ +++D ++++ C
Sbjct: 559 SAQ-CIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGC 617
Query: 586 NIYASSGKWEEVARLMGSM 604
A +G EE R SM
Sbjct: 618 ---AHAGLVEEGQRYFDSM 633
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 192/470 (40%), Gaps = 81/470 (17%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE--LYVQMLQSGLMPDQFTFGSIIRAC 191
AR FDE+P RN + + ++ G + A++ L V G + G +++ C
Sbjct: 57 ARQAFDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVG-VLKVC 113
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
+ LG+QLH I+ H + +L+ MY K+ ++D VF ++ ++++ +W
Sbjct: 114 GSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTW 173
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
S++ G+ I G S + M LF M + P+
Sbjct: 174 TSLLTGY-----------------------IQDGALS-----DVMELFFRMRAEGVWPNS 205
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------- 357
+T S+L S + G ++H+ +K G S V VCN+++ A
Sbjct: 206 VTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCG 265
Query: 358 -----------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
E +LF +S T T+ V+ CA + L +
Sbjct: 266 METRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLA 325
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQ 453
QLH ++K G VM LMD Y K G LG+A ++F M +VVSW+++I G Q
Sbjct: 326 RQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQ 385
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G A LF RMR GV PN T +LTA + Q+ + I+ T
Sbjct: 386 NGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTA- 444
Query: 514 RRSCVVDLLARAGRVHEAEDFIN--QMAFDDDIVVWKSLLASCKTHGNVD 561
LLA ++ E+ ++ +M D+V W ++L G+ D
Sbjct: 445 -------LLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSD 487
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 285/524 (54%), Gaps = 38/524 (7%)
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
++ + D L N ++ ++ A + + +M NV + AMI G Q+ Q A
Sbjct: 5 MVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQA 64
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ELYVQML++ + P +TF S+I+AC + + +H HV ++ SH+ Q +L+
Sbjct: 65 LELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDF 124
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTII 282
Y+ RI ++ VF + +D+ +W +M+ G + + A +F+ M NLA+WNT+I
Sbjct: 125 YSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLI 184
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
G A + A LF++M R++I + T+ I+ Y K F
Sbjct: 185 DGYARLREVDVAELLFNQMPARDII-----------SWTT--------MINCYSQNKRFR 225
Query: 343 SNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+ V N + +H PD +T V+ ACA + +L++G ++H YIM
Sbjct: 226 EALGVFNEMAKHG---------------ISPDEVTMATVISACAHLGALDLGKEIHYYIM 270
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ G LDV++ + L+DMY KCGSL + +F + + ++ W+S+I G A G EEAL
Sbjct: 271 QHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALA 330
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+F +M ++PN VT V VL+AC+H GL+EEG + + M ++ I P E C+VDLL
Sbjct: 331 MFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLL 390
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
++AG + EA I M + + V+W +LL+ CK H N+++ + AA ++ ++P NS
Sbjct: 391 SKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYT 450
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRK-VPGQSWIEIQTKIH 625
LL N+ A +W E A++ +MKE+GV K PG SWIE+++++H
Sbjct: 451 LLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVH 494
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 163/407 (40%), Gaps = 105/407 (25%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ LI AC + L+ VH H+ + + +++ Y G +E++ VFDEM
Sbjct: 82 TFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEM 141
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+V +WT M++G + G ++A L+ +MPD+
Sbjct: 142 PERDVFAWTTMVSGLVRVGDMSSAGRLF------DMMPDR-------------------- 175
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+L + N LI Y + + A +F+ + +DI SW +MI+ +S+
Sbjct: 176 -------------NLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNK 222
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
R EA+ +F+EM + PD +T+ +++ AC
Sbjct: 223 RFR----------------------------EALGVFNEMAKHGISPDEVTMATVISACA 254
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------------------ 357
+L G +IH YI++ GF +V + +A++ A
Sbjct: 255 HLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNS 314
Query: 358 ------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT- 404
E +F M + KP+ +TF V+ AC +E G + + +
Sbjct: 315 VIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDH 374
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG 450
+ V ++D+ K G L A +L M+ +P+ V W +L+ G
Sbjct: 375 SIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSG 421
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 60 YNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
+ EAL F+ + + I P T A +ISAC+ L +L LG+++H +I+ D +
Sbjct: 224 FREALGVFNEMAKHG---ISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYI 280
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ +++MY KCGSL+ + ++F ++ ++N+ W ++I G + +G A+ ++ +M + +
Sbjct: 281 GSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKI 340
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
P+ TF S++ AC+ + GR+ A + +
Sbjct: 341 KPNGVTFVSVLSACNHAGLIEEGRKRFASMTR 372
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 78/172 (45%), Gaps = 8/172 (4%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
++ ++KT D ++MN + + A + ME P+V ++++I G+ Q
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY---GIIPTRE 513
+AL+L+ +M + V P T ++ AC GLV + L+ + G
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKAC---GLVSQ-LRFAEAVHGHVWRNGFDSHVF 116
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
++ +VD + GR+ E+ ++M + D+ W ++++ G++ R
Sbjct: 117 VQTSLVDFYSSMGRIEESVRVFDEMP-ERDVFAWTTMVSGLVRVGDMSSAGR 167
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 300/583 (51%), Gaps = 71/583 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQ-PDAVLHNHILNMYGKCGSLEDARMVFDE 140
++ +++ACS+ +L GRK+H IL+ + ++ + +++MYGKCGS+ +A +VF E
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKE 498
Query: 141 M--PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
M P R++V+W M+ +QN + A ++MLQ G++PD +F S++ +C C
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY---CSQ 555
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
+ L +++S + S + + ALI+M+ + + A +VF+ + D+ SW +M
Sbjct: 556 EAQVLRMCILESGYRSACL-ETALISMHGRCRELEQARSVFNEMDHGDVVSWTAM----- 609
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++ A + E +LF M +IPD T+ + L
Sbjct: 610 -----------------------VSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLD 646
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------- 353
C + +L G IH+ + + G +++ V NA+L
Sbjct: 647 TCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVS 706
Query: 354 --------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
QAG E LF M KPD +TF+ + A + G H
Sbjct: 707 WNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAA 766
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
++GL DV V GL+ +Y KCG L A LF D VV +++I AQ G EEA+K
Sbjct: 767 ESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVK 826
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+F +M+ GVRP+ TLV +++AC H G+VEEG + M+ +GI PT E +C VDLL
Sbjct: 827 MFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLL 886
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG++ AE I +M F+D+ +VW SLL +CK G+ ++G+R A+ IL++DP NSAA V
Sbjct: 887 GRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHV 946
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+L NIY ++GKW++ M + V+ PG SW EI ++H
Sbjct: 947 VLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVH 989
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 145/590 (24%), Positives = 242/590 (41%), Gaps = 118/590 (20%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ + AC+SLR G +H + + D + N ++NMYGKCG E A VF M
Sbjct: 235 TFITALGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAM 291
Query: 142 PQR---NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC-V 197
R ++VSW AMI+ + G+ A+ ++ ++ G+ P+ T +I+ A +
Sbjct: 292 ASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDF 351
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI--------------A 243
G R H + +S + ++ NA+I+MY K AW VF I A
Sbjct: 352 GAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411
Query: 244 RKDITSWGSMIDGF-------------------------SKLDFART------------- 265
+D S+G +++ F LDF R
Sbjct: 412 SEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYV 471
Query: 266 -----------------------VFNEMESPN--LASWNTIIAGVASCSNANEAMSLFSE 300
VF EM P+ L +WN ++ A + EA E
Sbjct: 472 ESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALME 531
Query: 301 MGDRELIPDGLTVRSLLCAC------------------------TSPLSLY---QGMQIH 333
M ++PD L+ S+L +C T+ +S++ + ++
Sbjct: 532 MLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQA 591
Query: 334 SYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMGACAAM 388
+ + + +V A++ A E+ LF M PD T + C A
Sbjct: 592 RSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLAS 651
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+L +G +H + + GL D+ V N L++MY CG A F M+ D+VSW+ +
Sbjct: 652 TTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMS 711
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
YAQ G +EA+ LFR+M+ GV+P+ +T L LV +G +L+ + E G+
Sbjct: 712 AAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHALAAESGL 770
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +V L A+ G++ EA + A D +V+ +++ + HG
Sbjct: 771 DSDVSVATGLVKLYAKCGKLDEAMSLF-RGACDWTVVLLNAIIGALAQHG 819
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 234/494 (47%), Gaps = 29/494 (5%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L+ +C L G+ H+ I ++ + L N ++NMY +CGSLE+A +F +M
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+RNVVSWTA+I+ +Q G A L+ M L+S P+ +T +++ AC+ + +GR
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 202 QLHAHV----IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
+HA + ++ + + NA+I MY K + DA VF +I KD+ SW +M +
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207
Query: 258 SK----LDFARTVFNEM----ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
++ A +F EM +PN+ T I + +C++ + L S + + L D
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVI---TFITALGACTSLRDGTWLHSLLHEASLGFD 264
Query: 310 GLTVRSLL-----CA-CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLF 363
L +L+ C S+++ M + + N + ++ + G+ +F
Sbjct: 265 PLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSW--NAMISASVEAGRHGDAMAIF 322
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQ--LHCYIMKTGLALDVFVMNGLMDMYV 421
+ +P+ +T ++ A AA + ++ G H I ++G DV + N ++ MY
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAA-SGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYA 381
Query: 422 KCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCG +A +F + DV+SW++++ + + F M +G+ PN V+ +
Sbjct: 382 KCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFI 441
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
+L ACS+ ++ G +++ ++ + +V + + G + EAE +M
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPL 501
Query: 541 DD-DIVVWKSLLAS 553
+V W +L +
Sbjct: 502 PSRSLVTWNVMLGA 515
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 237/526 (45%), Gaps = 90/526 (17%)
Query: 80 PSTYA--DLISACSSLRSLQLGRKVHDHI----LSSKCQPDAVLHNHILNMYGKCGSLED 133
P++Y +++AC++ R L +GR +H I L ++ N ++NMY KCGSLED
Sbjct: 125 PNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLED 184
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQ-ENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
A VF +P+++VVSWTAM +Q + A+ ++ +ML L P+ TF + + AC+
Sbjct: 185 AIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT 244
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L G LH+ + ++ G ++ NALI MY K A++VF ++A +
Sbjct: 245 SL---RDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASR------- 294
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+ +L SWN +I+ +AM++F + + P+ +T
Sbjct: 295 ------------------QELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVT 336
Query: 313 VRSLLCA-CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--------------- 356
+ ++L A S + H I + G+ +V + NAI+ A
Sbjct: 337 LITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRI 396
Query: 357 ----------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
G++ F ML + P+ ++F ++ AC+ +L+ G
Sbjct: 397 RWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFG 456
Query: 395 TQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP--DVVSWSSLIVGY 451
++H I+ + ++ V L+ MY KCGS+ A +F M P +V+W+ ++ Y
Sbjct: 457 RKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAY 516
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
AQ +EA M GV P+ ++ VL++C + Q+ R+ I+ +
Sbjct: 517 AQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEAQVLRMC-----ILES 567
Query: 512 RERRSC----VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
R +C ++ + R + +A N+M D+V W +++++
Sbjct: 568 GYRSACLETALISMHGRCRELEQARSVFNEMD-HGDVVSWTAMVSA 612
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 201/624 (32%), Positives = 300/624 (48%), Gaps = 103/624 (16%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+ ++ T+ +L+ AC + R L G+ +H S P L NH +Y KCGSL +A
Sbjct: 4 TYPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNA 63
Query: 135 -------------------------------RMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
R VFDE+PQ ++VS+ +IA + G+
Sbjct: 64 QTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECG 123
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
+ L+ ++ + L D FT +I AC VGL RQLH V+ H + NA++
Sbjct: 124 PTLRLFEEVRELRLGLDGFTLSGVITACGDD--VGLVRQLHCFVVVCGHDCYASVNNAVL 181
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES---PNLASWNT 280
A Y++ GF L AR VF EM + SWN
Sbjct: 182 ACYSR--------------------------KGF--LSEARRVFREMGEGGGRDEVSWNA 213
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I EA+ LF EM R L D T+ S+L A T L G Q H +IK G
Sbjct: 214 MIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSG 273
Query: 341 FYSNVPV-----------------CNAILQHQAGELFRLFSLMLASQT------------ 371
F+ N V C + + L++ M++ +
Sbjct: 274 FHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWC 333
Query: 372 ---------KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYV 421
+PD +F V AC+ ++S +G Q+H +K+ + + V V N L+ MY
Sbjct: 334 FREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYS 393
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG++ AR +F+ M + + VS +S+I GYAQ G E+L+LF M + PN +T +
Sbjct: 394 KCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIA 453
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL+AC H G VEEG + + +M+ + I P E SC++DLL RAG++ EAE I M F+
Sbjct: 454 VLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFN 513
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ W +LL +C+ HGNV++ +AA L+++P N+A V+L N+YAS+ +WEE A +
Sbjct: 514 PGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVK 573
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
M+ERGV+K PG SWIEI K+H
Sbjct: 574 RLMRERGVKKKPGCSWIEIDKKVH 597
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
++L + L F +Q N FR ++ + SACS+L S LG++VH + S + V
Sbjct: 324 EDLSEDGLWCFREMQRN-GFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRV 382
Query: 117 -LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++N ++ MY KCG++ DAR VFD MP+ N VS +MIAG +Q+G E ++ L+ ML+
Sbjct: 383 SVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEK 442
Query: 176 GLMPDQFTFGSIIRAC 191
+ P+ TF +++ AC
Sbjct: 443 DIAPNSITFIAVLSAC 458
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 192/652 (29%), Positives = 322/652 (49%), Gaps = 78/652 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDI--WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFR 77
D + C L A V D R ++ W+ L + Y EA+ D +
Sbjct: 59 DLYIACSELKIARHVFDKMPHRPKNVVLWNL-LIRAYAWNGPYEEAI---DLYYKMLGYG 114
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I P+ T+ ++ ACS+L+ GR++H I + + + + +++ Y KCG L+DA+
Sbjct: 115 ITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAK 174
Query: 136 MVFDEMPQRNVVSWTAMIAGCS-QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
VFD+M +R+VV+W +MI+G S G + L VQM Q+ + P+ T ++ A + +
Sbjct: 175 EVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQV 233
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+++H ++ ++ ++ +Y K I
Sbjct: 234 NSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCI---------------------- 271
Query: 255 DGFSKLDFARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSE---MGDRELIPDG 310
D+AR +F+ M N +W+ ++ C EA+ LF + + D ++
Sbjct: 272 ------DYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSA 325
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------- 357
+T+ +++ C + L G +H Y IK GF ++ V N +L A
Sbjct: 326 VTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNE 385
Query: 358 -----------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
E R+F M S P+ T V+ ACA +A L G
Sbjct: 386 MDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYG 445
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+ HCY + G D + N L+DMY KCG + +AR++F+ M +VSW+++I+ Y
Sbjct: 446 SCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIH 505
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G G EAL LF M+S G++P+ VT + +++ACSH GLV EG + M ++GIIP E
Sbjct: 506 GIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEH 565
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+C+VDLL+RAG E FI +M + D+ VW +LL++C+ + NV++G+ ++ I K+
Sbjct: 566 YACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLG 625
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
P ++ VLL N+Y++ G+W++ A++ + KE+G K PG SWIEI +H
Sbjct: 626 PESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHT 677
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 275/535 (51%), Gaps = 70/535 (13%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
GSL+ AR+VF ++P + ++I GC+ A+ Y +M+ GL+PD++TF S+
Sbjct: 36 GSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLF 95
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
++C G+Q+H H K S +QN L+ MY+
Sbjct: 96 KSCRN---SSEGKQIHCHSTKLGFASDTYAQNTLMNMYS--------------------- 131
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI- 307
+ G ++ AR VF++ME + SW T+I A NEA+ LF M E +
Sbjct: 132 NCGCLVS-------ARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVK 184
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------- 352
P+ +T+ ++L AC L +IH YI + GF +V V N +L
Sbjct: 185 PNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHV-VLNTVLMDVYCKCGCVQLARD 243
Query: 353 ---QHQAGELFR-------------------LFSLMLASQTKPDHITFNDVMGACAAMAS 390
+ Q LF LF M K D +T ++ AC + +
Sbjct: 244 LFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGA 303
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
LE+G LH YI K + +DV + L+DMY KCGS+ +A ++F+ M + DV++W++LI+G
Sbjct: 304 LELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILG 363
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
A G E AL+ F M GV+P+ +T VGVL ACSH G V+EG+ + M + YGI P
Sbjct: 364 LAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQP 423
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
T E +VD+L RAGR+ EAE+ I M D V LL +C+ HGN++ +RAA+ +
Sbjct: 424 TIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQL 483
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L+IDP +S VLL NIY SS KWEE R M ERG+RK PG S IE+ +H
Sbjct: 484 LEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVH 538
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 153/335 (45%), Gaps = 31/335 (9%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
NEA+ FD + + N + T ++++AC+ R L + +++H++I VL+
Sbjct: 168 NEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTV 227
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++++Y KCG ++ AR +FD+ ++N+ SW MI G ++ A+ L+ +M G+ D
Sbjct: 228 LMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGD 287
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+ T S++ AC+ L + LG+ LHA++ K + AL+ MY K I A VF
Sbjct: 288 KVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFH 347
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+ KD+ +W +I G+A C A A+ F E
Sbjct: 348 EMPEKDVM----------------------------TWTALILGLAMCGQAENALQYFDE 379
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGM-QIHSYIIKKGFYSNVPVCNAILQ--HQAG 357
M + + PD +T +L AC+ + +G+ +S G + ++ +AG
Sbjct: 380 MHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAG 439
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ L+ + PD ++GAC +LE
Sbjct: 440 RIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLE 474
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDM--YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
Q+H +++TGL D F + ++ + GSL AR +F+ + +P + +S+I G
Sbjct: 6 QIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTD 65
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
+EAL ++ M G+ P+ T + +C + EG Q++ + G
Sbjct: 66 KNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIH-CHSTKLGFASDTY 121
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
++ ++++ + G + A ++M D +V W +++
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKME-DKTVVSWATMIG 159
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 186/568 (32%), Positives = 299/568 (52%), Gaps = 41/568 (7%)
Query: 64 LVAFDF-LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
L + DF +N ++ T DL++ SS SL ++VH L + D + ++
Sbjct: 11 LASKDFSTENKFTSQLSQKTILDLLNTKSST-SLHHLKQVHAVALRTGHFQDHYVSGTLV 69
Query: 123 NMYGKC--GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
Y +L A VF+ +P NV + +I GC QN + AI Y +M+ + P+
Sbjct: 70 KCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPN 129
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+FT+ ++ +AC+ G Q+HAHVIK + ++A I MY F + A +
Sbjct: 130 KFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLG 189
Query: 241 SIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
D+ + +MIDG+ K ++ A+ +F ME N+ SWN +++G+A C EA L
Sbjct: 190 EDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEAREL 249
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG 357
F+EM ++ I + M I YI K G+Y
Sbjct: 250 FNEMKEKNEIS------------------WSAM-IDGYI-KGGYYK-------------- 275
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E +F++M + +P + V+ ACA + +L+ G +H Y+ + D + L+
Sbjct: 276 EALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALV 335
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
DMY KCG L A ++F ME +V +W+++I G G E+A++LF +M+ RPN +
Sbjct: 336 DMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGI 395
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
TL+GVL+AC+H G+V+EGL+++ M+ YGI P E CVVDLL RAG + EAE+ +
Sbjct: 396 TLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYS 455
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M + VW +LL +C+ HG+V++G+R + +L+++P NS LL NIYA +G+W++V
Sbjct: 456 MPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDV 515
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A + MKERGV+ G S I+ +H
Sbjct: 516 ANVRKLMKERGVKTSTGISMIDFDGVVH 543
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 311/566 (54%), Gaps = 22/566 (3%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHI--LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ L+ C+ +VH L P + N +L Y + L+ A ++F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E+P+++ V++ +I G ++G +I L+++M QSG P FTF +++A GL L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+QLHA + + N ++ Y+K DR+L+ +F + D S+ +I +S+
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 260 LDFART---VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
D F EM+ N A + S + ++ + ++ + L+ T S+
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA---TADSI 385
Query: 317 LCACTSPLSLY-------QGMQIHSYIIKKGFYSNVPVCNAILQ---HQAGELFRLFSLM 366
L S + +Y + I + ++ S + + +Q H AG +LF+ M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG--LKLFTKM 443
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
S + D TF V+ A A+ ASL +G QLH +I+++G +VF +GL+DMY KCGS+
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A ++F M D + VSW++LI +A G GE A+ F +M SG++P+ V+++GVLTAC
Sbjct: 504 KDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SH G VE+G + ++ M YGI P ++ +C++DLL R GR EAE +++M F+ D ++
Sbjct: 564 SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDP-TNSAALVLLCNIYASSGKWEEVARLMGSMK 605
W S+L +C+ H N + +RAAE + ++ ++AA V + NIYA++G+WE+V + +M+
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMR 683
Query: 606 ERGVRKVPGQSWIEIQTKIHA-SGND 630
ERG++KVP SW+E+ KIH S ND
Sbjct: 684 ERGIKKVPAYSWVEVNHKIHVFSSND 709
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 173/359 (48%), Gaps = 50/359 (13%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD++ + D + SS + + Y +L F +Q F R +A ++S ++L S
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC-MGFDRRNFPFATMLSIAANLSS 366
Query: 96 LQLGRKVHDHILSSKCQPDAVLH--NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
LQ+GR++H L + D++LH N +++MY KC E+A ++F +PQR VSWTA+I
Sbjct: 367 LQMGRQLHCQALLATA--DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+G Q G A ++L+ +M S L DQ TF ++++A + + LG+QLHA +I+S +
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
++ S + L+ MY K I DA VF EM
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVF----------------------------EEMPDR 516
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ-- 331
N SWN +I+ A + A+ F++M + L PD +++ +L AC+ + QG +
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 332 -----IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
I+ KK Y+ C L + G LM +PD I ++ V+ AC
Sbjct: 577 QAMSPIYGITPKKKHYA----CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 631
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 217/501 (43%), Gaps = 74/501 (14%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
RKV+D + + V N +++ + K G + AR +FD MP R VV+WT ++ ++
Sbjct: 67 ARKVYDEM----PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122
Query: 159 NGQENAAIELYVQMLQSG--LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK--SEHGS 214
N + A +L+ QM +S +PD TF +++ C+ Q+HA +K +
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
L N L+ Y + R+ A +F I KD ++ ++I G+ K
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK--------------- 227
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
G+ + E++ LF +M P T +L A G Q+H+
Sbjct: 228 --------DGLYT-----ESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 335 YIIKKGFYSNVPVCNAIL----QH-----------QAGEL-FRLFSLMLASQTKPD---- 374
+ GF + V N IL +H + EL F ++++++S ++ D
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 375 ----------------HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
+ F ++ A ++SL+MG QLHC + + V N L+D
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY KC A +F + VSW++LI GY Q G LKLF +MR S +R + T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
VL A + + G QL+ + G + S +VD+ A+ G + +A +M
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 539 AFDDDIVVWKSLLASCKTHGN 559
D + V W +L+++ +G+
Sbjct: 514 P-DRNAVSWNALISAHADNGD 533
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 201/624 (32%), Positives = 311/624 (49%), Gaps = 72/624 (11%)
Query: 42 FDDIWDFDLFSSLCKQNLYNEALVAFD----FLQNNTNFRIRPS--TYADLISACSSLRS 95
FD + LFS +Y + FD F++ + R P TY +I AC L
Sbjct: 69 FDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSL 128
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+ +G +H D + N +L MY G E A++VFD M +R V+SW MI G
Sbjct: 129 IDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMING 188
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+N A+ +Y +M+ G+ PD T S++ AC L V LGR++H V + +
Sbjct: 189 YFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGN 248
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
++ +NAL+ MY K ++ +AW + + KD+ +W
Sbjct: 249 IVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTW------------------------- 283
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
T+I G +A A+ L M + P+ +++ SLL AC S + L G +H++
Sbjct: 284 ---TTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAW 340
Query: 336 IIKKGFYSNVPV----------CNA--------------------------ILQHQAGEL 359
I++ S V V CN I A E
Sbjct: 341 AIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREA 400
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
LF ML +PDH TFN ++ A A +A L+ +HCY++++G + V + L+D+
Sbjct: 401 IELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDI 460
Query: 420 YVKCGSLGSARELFNF--MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
Y KCGSLG A ++FN ++D D++ WS++I Y + G G+ A+KLF +M SGV+PNHV
Sbjct: 461 YSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHV 520
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VL ACSH GLV EG L+ M ++ II + +C++DLL RAGR+++A + I
Sbjct: 521 TFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRT 580
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M + VW +LL +C H NV++G+ AA K++P N+ VLL +YA+ G+W +
Sbjct: 581 MPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWGDA 640
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQ 621
R+ + E G+RK+P S IE++
Sbjct: 641 ERVRDMVNEVGLRKLPAHSLIEVR 664
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 219/494 (44%), Gaps = 66/494 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+ S+ +S +++H IL+ + L + + Y +C A +FD++ Q
Sbjct: 17 LLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPC 76
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+ SW AM+ Q G+ A+ L+V+ML SG +PD+FT+ +I+AC L + +G +H
Sbjct: 77 LFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIH 136
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
K + S QN L+AMY A VF + + + SW +MI+G+ +
Sbjct: 137 GQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFR----- 191
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+C A +A++++ M D + PD TV S+L AC
Sbjct: 192 ---------------------NNC--AEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLK 228
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNA---------------------------------- 350
++ G ++H+ + +KGF+ N+ V NA
Sbjct: 229 NVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLIN 288
Query: 351 --ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
IL A L +M KP+ ++ ++ AC ++ L G LH + ++ +
Sbjct: 289 GYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIES 348
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+V V L++MY KC + ++F W++L+ G+ Q EA++LF++M
Sbjct: 349 EVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQML 408
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
V+P+H T +L A + + +++ + ++ + G + E S +VD+ ++ G +
Sbjct: 409 VKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSL 467
Query: 529 HEAEDFINQMAFDD 542
A N ++ D
Sbjct: 468 GYAHQIFNIISLKD 481
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 304/612 (49%), Gaps = 70/612 (11%)
Query: 53 SLCKQNLYNEALVAFDFLQ--NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
SL K NEA F+FLQ + + +Y L AC LRSL GR +HD +
Sbjct: 57 SLSKHRKLNEA---FEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGI 113
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
P +L N +L MY +C SLEDA +FDEM + N VS T MI+ ++ G + A+ L+
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
ML SG P + +++++ + GRQ+HAHVI++ S+ + ++ MY K
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
++ A VF +A K + ++ G+++ AR
Sbjct: 234 WLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRAR-------------------------- 267
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV--- 347
+A+ LF ++ + D +L AC S L G QIH+ + K G S V V
Sbjct: 268 --DALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTP 325
Query: 348 --------------CNAILQ-------------------HQAGELFRLF-SLMLASQTKP 373
C A + Q E + F SL + +
Sbjct: 326 LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+ T+ + AC+ +A +G Q+H +K L + + L+ MY KCG L A E+F
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVF 445
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
M++PD+V+W++ I G+A +G EAL+LF +M S G++PN VT + VLTACSH GLVE
Sbjct: 446 ESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVE 505
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+G M +Y + PT + C++D+ AR+G + EA F+ M F+ D + WK L+
Sbjct: 506 QGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C TH N+++G+ A E + ++DP ++A VL N+Y +GKWEE A +M M ER ++K
Sbjct: 566 CWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKEL 625
Query: 614 GQSWIEIQTKIH 625
SWI+ + KIH
Sbjct: 626 SCSWIQEKGKIH 637
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 34/250 (13%)
Query: 39 LRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQL 98
+R +D+ + S C+ + + EA+ F L++ + TY + ACS L +
Sbjct: 346 IREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI 405
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G +VH + + ++ MY KCG L+DA VF+ M ++V+WTA I+G +
Sbjct: 406 GGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAY 465
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G + A+ L+ +M+ G+ P+ TF +++ ACS HA ++ E G H +
Sbjct: 466 YGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS-----------HAGLV--EQGKHCL- 511
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEME-SPN 274
D +L +NV +I D MID +++ LD A M P+
Sbjct: 512 -----------DTMLRKYNVAPTIDHYDC-----MIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 275 LASWNTIIAG 284
SW ++G
Sbjct: 556 AMSWKCFLSG 565
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 307/603 (50%), Gaps = 67/603 (11%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
E+L A + + +TY + AC +++GR +H IL S D + N
Sbjct: 231 ESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSN 290
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++ MY CG +EDA VF M ++ VSW +++G QN + AI + M SG P
Sbjct: 291 ALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKP 350
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
DQ + ++I A + G ++HA+ IK S++ N+LI MY K
Sbjct: 351 DQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKC---------- 400
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ + + F M +L SW TIIAG A +A++L
Sbjct: 401 ------------------CCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLR 442
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------ 353
++ ++ D + + S+L AC+ S +IH Y++K G +++ + NAI+
Sbjct: 443 KVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELA 501
Query: 354 ----------------------------HQ--AGELFRLFSLMLASQTKPDHITFNDVMG 383
H A E LF+ ++ + +PD IT V+
Sbjct: 502 LVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLY 561
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
A AA++SL+ G ++H ++++ G L+ + N L+DMY +CG++ +AR +FN+++ D++
Sbjct: 562 AAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLIL 621
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+S+I GCG++A+ LF +M V P+H+T + +L ACSH GLV EG Q + IM+
Sbjct: 622 WTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMK 681
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
NEY + P E +C+VDLLAR+ + EA F+ M + VW +LL +C+ H N D+G
Sbjct: 682 NEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLG 741
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+ AA+ +L+++ NS VL+ N +A+ G+W +V + MK ++K PG SWIE++ K
Sbjct: 742 EVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENK 801
Query: 624 IHA 626
IH
Sbjct: 802 IHT 804
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/535 (27%), Positives = 247/535 (46%), Gaps = 81/535 (15%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYG 126
D L T F ++ + Y+ + C+S ++L G+++H H L ++ D+V L ++MYG
Sbjct: 35 DPLPTTTRFPLQQA-YSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYG 93
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
KCGS DA VFD+M +R + +W AMI C G+ AIELY +M G+ D FTF
Sbjct: 94 KCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPC 153
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+++AC LG ++H +K +G + NALIAMY K
Sbjct: 154 VLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAK------------------ 195
Query: 247 ITSWGSMIDGFSKLDFARTVFNE--MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
L AR +F+ ME + SWN+II+ + EA+SLF M +
Sbjct: 196 ----------CGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEV 245
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----EL 359
+ + T S L AC P + G IH+ I+K +++V V NA++ A +
Sbjct: 246 GVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDA 305
Query: 360 FRLFSLML-------------------------------ASQTKPDHITFNDVMGACAAM 388
R+F ML S KPD ++ +++ A
Sbjct: 306 ERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRS 365
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
A+L G ++H Y +K G+ ++ + N L+DMY KC + F +M + D++SW+++I
Sbjct: 366 ANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTII 425
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
GYAQ C +AL L R+++ + + + + +L ACS GL+ ++++ +G
Sbjct: 426 AGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS-------GLKSEKLIKEIHGY 478
Query: 509 IPTRER-----RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++ +V++ V A + DIV W S++ C +G
Sbjct: 479 VLKGGLADILIQNAIVNVYGELALVDYARHVFESIN-SKDIVSWTSMITCCVHNG 532
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/550 (26%), Positives = 264/550 (48%), Gaps = 79/550 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH--NHILNMYGKCGSLEDARMVFD 139
T+ ++ AC + + +LG ++H ++ KC + N ++ MY KCG L AR++FD
Sbjct: 150 TFPCVLKACGAFKERRLGCEIHG--VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFD 207
Query: 140 E--MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
M + + VSW ++I+ G+ A+ L+ +M + G+ + +TF S ++AC G +
Sbjct: 208 SGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFI 267
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
+GR +HA ++KS H + + NALIAMY ++ DA VF S+ KD SW +++ G
Sbjct: 268 KIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGM 327
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
V N+M S +A++ F +M D PD ++V +++
Sbjct: 328 --------VQNDMYS--------------------DAINHFQDMQDSGQKPDQVSVLNMI 359
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR-------- 361
A +L GM++H+Y IK G SN+ + N+++ G F
Sbjct: 360 AASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLI 419
Query: 362 --------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
L + + D + ++ AC+ + S ++ ++H Y+
Sbjct: 420 SWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYV 479
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K GLA D+ + N ++++Y + + AR +F + D+VSW+S+I G EAL
Sbjct: 480 LKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEAL 538
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+LF + + + P+ +TLV VL A + + +++G +++ + + G + +VD+
Sbjct: 539 ELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRK-GFFLEGLIANSLVDM 597
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDV-GKRAAENILKIDPT 576
AR G + A + N + D+++W S++ + HG +D+ K EN+L D
Sbjct: 598 YARCGTMENARNIFNYVK-QRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLP-DHI 655
Query: 577 NSAALVLLCN 586
AL+ C+
Sbjct: 656 TFLALLYACS 665
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 186/462 (40%), Gaps = 73/462 (15%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE-HGSHLISQNALIAMYTKFDRILDAWN 237
P Q + + C+ + G+QLHAH +K++ + + + MY K DA
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF ++ RT+F +WN +I S EA+ L
Sbjct: 104 VFDKMSE-------------------RTIF---------TWNAMIGACVSAGRYVEAIEL 135
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----- 352
+ EM + D T +L AC + G +IH +K G+ V VCNA++
Sbjct: 136 YKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAK 195
Query: 353 ---------------------------------QHQAGELFRLFSLMLASQTKPDHITFN 379
+ ++ E LF M + + TF
Sbjct: 196 CGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFV 255
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+ AC +++G +H I+K+ DV+V N L+ MY CG + A +F M
Sbjct: 256 SALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFK 315
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D VSW++L+ G Q +A+ F+ M+ SG +P+ V+++ ++ A + G++++
Sbjct: 316 DCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVH 375
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH-- 557
++GI + ++D+ + V M + D++ W +++A +
Sbjct: 376 AYAI-KHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP-EKDLISWTTIIAGYAQNEC 433
Query: 558 --GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
+++ ++ + +DP +++L C+ S +E+
Sbjct: 434 HLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEI 475
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQN-LYNEALVAFDFLQNNTNFRIRPSTYAD 85
L+D A V +S + DI + + C N L EAL F+ L TN T
Sbjct: 502 LVDYARHVFESINSK--DIVSWTSMITCCVHNGLAIEALELFNSLIE-TNIEPDLITLVS 558
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ A ++L SL+ G+++H ++ + ++ N +++MY +CG++E+AR +F+ + QR+
Sbjct: 559 VLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRD 618
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
++ WT+MI +G AI+L+ +M ++PD TF +++ ACS V G+Q H
Sbjct: 619 LILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ-HF 677
Query: 206 HVIKSEH 212
++K+E+
Sbjct: 678 EIMKNEY 684
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 342 YSNVPVCNAILQHQAGELFRLFSLMLASQTK-PDHITFNDVMGACAAMASLEMGTQLHCY 400
+S+ P+ L+ L F+ L + T+ P ++ + CA+ +L G QLH +
Sbjct: 15 FSHRPIS---LKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAH 71
Query: 401 IMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+KT LD VF+ + MY KCGS A ++F+ M + + +W+++I G E
Sbjct: 72 FLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVE 131
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A++L++ MR GV + T VL AC
Sbjct: 132 AIELYKEMRVLGVSLDAFTFPCVLKAC 158
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 197/629 (31%), Positives = 316/629 (50%), Gaps = 73/629 (11%)
Query: 42 FDDIWDFDLFS--SLCKQ----NLYNEALVAFDFLQNNTNFRIRPST--YADLISACSSL 93
FD + D+ S S+ K+ N +EAL+ F ++ + + P T + ++ AC
Sbjct: 63 FDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRV-VDHAVSPDTSVLSVVLKACGQS 121
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++ G +H + + + + + +L+MY + G ++ + VF EMP RN V+WTA+I
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G G+ + + +M +S + D +TF ++AC+GL V G+ +H HVI
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV 241
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ L N+L MYT+ G M DG +F M
Sbjct: 242 TTLCVANSLATMYTE---------------------CGEMQDGL-------CLFENMSER 273
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ SW ++I +A+ F +M + ++ P+ T S+ AC S L G Q+H
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 334 SYIIKKGFYSNVPVCNAILQH---------------------------------QAG--- 357
++ G ++ V N++++ QAG
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E F+ FS M S TKP ++ MA +E G Q+H + GL + V + L+
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLI 453
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
+MY KCGS+ A +F + D+VS +++I GYA+ G +EA+ LF + G RP+ V
Sbjct: 454 NMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSV 513
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T + VLTAC+H G ++ G + +MQ Y + P +E C+VDLL RAGR+ +AE IN+
Sbjct: 514 TFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINE 573
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M++ D VVW +LL +CK G+++ G+RAAE IL++DPT + ALV L NIY+S+G EE
Sbjct: 574 MSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEA 633
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
A + +MK +GV K PG S I+I+ + A
Sbjct: 634 ANVRKNMKAKGVIKEPGWSSIKIKDCVSA 662
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 211/483 (43%), Gaps = 68/483 (14%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM--LQSGLMPDQFTFGS 186
G+L AR VFD+MP ++VSWT++I + A+ L+ M + + PD
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+++AC + G LHA+ +K+ S + ++L+ MY + +I + VFS
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFS------ 167
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
EM N +W II G+ E ++ FSEM E
Sbjct: 168 ----------------------EMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEE 205
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN--AILQHQAGEL----- 359
+ D T L AC + G IH+++I +GF + + V N A + + GE+
Sbjct: 206 LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC 265
Query: 360 -----------------------------FRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
F M SQ P+ TF + ACA+++
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L G QLHC ++ GL + V N +M MY CG+L SA LF M D++SWS++I G
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y Q G GEE K F MR SG +P L +L+ ++ ++E G Q++ + +G+
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALC-FGLEQ 444
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
RS ++++ ++ G + EA + DDIV +++ HG E
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETD-RDDIVSLTAMINGYAEHGKSKEAIDLFEKS 503
Query: 571 LKI 573
LK+
Sbjct: 504 LKV 506
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-- 468
F N + + G+L +AR++F+ M D+VSW+S+I Y +EAL LF MR
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVE--EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
V P+ L VL AC + E L Y + + ++ + S ++D+ R G
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAV---KTSLLSSVYVGSSLLDMYKRVG 157
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLL 551
++ ++ ++M F + V W +++
Sbjct: 158 KIDKSCRVFSEMPF-RNAVTWTAII 181
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 318/624 (50%), Gaps = 67/624 (10%)
Query: 44 DIWDFDL-FSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
DI ++++ SS + NEAL F + R +Y +IS +L RK+
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP-----RWSSVSYNGMISGYLRNGEFELARKL 117
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
D + + D V N ++ Y + +L AR +F+ MP+R+V SW M++G +QNG
Sbjct: 118 FDEM----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 163 NAAIELYVQMLQ------SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
+ A ++ +M + + L+ + AC + KS L
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC--------------MLFKSRENWAL 219
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESP 273
+S N L+ + K +I++A F S+ +D+ SW ++I G++ K+D AR +F+E
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP---------------------DGLT 312
++ +W +++G EA LF +M +R + D +
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQAG---ELFRL 362
R++ T Q +I K + +P + + Q+G E RL
Sbjct: 340 CRNVSTWNTMITGYAQCGKISE---AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M + + +F+ + CA + +LE+G QLH ++K G FV N L+ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ A +LF M D+VSW+++I GY++ G GE AL+ F M+ G++P+ T+V V
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSH GLV++G Q + M +YG++P + +C+VDLL RAG + +A + + M F+
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D +W +LL + + HGN ++ + AA+ I ++P NS VLL N+YASSG+W +V +L
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 603 SMKERGVRKVPGQSWIEIQTKIHA 626
M+++GV+KVPG SWIEIQ K H
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHT 660
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 321/619 (51%), Gaps = 72/619 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDF---LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHI 106
+ S+ L E+L F + L N TN +T + L+S CSS+ +L+ GR +H +
Sbjct: 1019 MISAYAHHGLCRESLRCFHWMRHLHNETN----STTLSSLLSVCSSVDNLKWGRGIHGLV 1074
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ + + N +L +Y + G EDA +VF M +R+++SW +M+A Q+G+ +
Sbjct: 1075 VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGL 1134
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
++ ++LQ G + + TF S + ACS C+ + +HA +I + LI NAL+ MY
Sbjct: 1135 KILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMY 1194
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
K +++A + V M P+ +WN +I G A
Sbjct: 1195 GKLGMMMEA----------------------------KKVLQTMPQPDRVTWNALIGGHA 1226
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNV 345
NEA+ + + ++ + + +T+ S+L AC++P L + GM IH++I+ GF S+
Sbjct: 1227 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDD 1286
Query: 346 PVCNAIL-----------------------------------QHQAGE-LFRLFSLMLAS 369
V N+++ H GE ++F M
Sbjct: 1287 YVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNV 1346
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
D +F+ + A A +A LE G QLH ++K G D+ V N MDMY KCG +
Sbjct: 1347 GVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDV 1406
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
++ + +SW+ LI +A+ GC ++A + F M G +P+HVT V +L+AC+H
Sbjct: 1407 LKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHG 1466
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
GLV+EGL Y M E+G+ P E C++DLL R+GR+ AE FI +M + + W+S
Sbjct: 1467 GLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRS 1526
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LLA+C+ HGN+++ ++ AE++L++DP++ +A VL N+ A+SGKWE+V L M +
Sbjct: 1527 LLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNI 1586
Query: 610 RKVPGQSWIEIQTKIHASG 628
+K P SW++++ K+H+ G
Sbjct: 1587 KKQPACSWVKLKDKVHSFG 1605
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 303/613 (49%), Gaps = 69/613 (11%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHIL 107
F S C EAL L +N R+ PS Y ++ C ++ + G +H H++
Sbjct: 2 FSKIQSACNLGRLAEAL---KLLSSNPT-RLDPSLYLKILQLCIDKKAKKQGHLIHTHLI 57
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
++ D L+ ++ Y K G + AR VFD MP+R+VVSWTAM++G SQNG+ A
Sbjct: 58 TNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFV 117
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L+ M G+ +QFT+GS +RAC+ L C+ +G Q+ + K +L ++AL+ ++
Sbjct: 118 LFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHS 177
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K ++ DA +F ++ +D+ S WN +I G A
Sbjct: 178 KCGKMEDASYLFGTMMERDVVS----------------------------WNAMIGGYAV 209
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
A+++ +F M L+PD T+ S+L A L QIH I + G+ S V
Sbjct: 210 QGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIV 269
Query: 348 CNAILQHQAG-----------------ELFR--------------------LFSLMLASQ 370
++ A +LF LF M
Sbjct: 270 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMN 329
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
D + ++ CA +AS +GTQ+H + +K + DV + N L+DMY K G + A+
Sbjct: 330 IGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAK 389
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
F+ ME+ +V+SW+SLI GYA+ G G A+ L+++M S G +PN VT + +L ACSH G
Sbjct: 390 RAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTG 449
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
L EG + + M N+Y I P E SC+VDL AR G + EA + + ++ + +W ++
Sbjct: 450 LTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAI 509
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L + +G + +GK AA N+ + P NS V+L +IY+++G W++ ++ M+ER +
Sbjct: 510 LGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTK 569
Query: 611 KVPGQSWIEIQTK 623
K G S+ + K
Sbjct: 570 KNAGYSFFQATKK 582
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 161/661 (24%), Positives = 284/661 (42%), Gaps = 119/661 (18%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
++ A V D R + W + S + LY EA+ F + + P+ + A
Sbjct: 795 IEHARYVFDEMRHRNEASWS-TMLSGYVRVGLYEEAVGLFCQMWG---LGVEPNGFMVAS 850
Query: 86 LISACS-SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
LI+ACS S G +VH ++ + D + +++ YG G + +A+ +F+EMP
Sbjct: 851 LITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 910
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NVVSWT+++ G S +G + +Y +M Q G+ +Q TF ++ +C L LG Q+
Sbjct: 911 NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 970
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK----- 259
H+I+ + N+LI+M++ F + +A VF + DI SW +MI ++
Sbjct: 971 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 1030
Query: 260 -----LDFARTVFNEMES--------------------------------PNLASWNTII 282
+ R + NE S N+ NT++
Sbjct: 1031 ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 1090
Query: 283 AGVASCSNANEAMSLFSEMGDRELIP---------------DGL---------------- 311
+ + +A +F M +R+LI DGL
Sbjct: 1091 TLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHV 1150
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------- 352
T S L AC++P L + +H+ II GF+ + V NA++
Sbjct: 1151 TFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM 1210
Query: 353 -----------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS-LEMG 394
+ E + + L+ ++IT V+GAC+A L+ G
Sbjct: 1211 PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHG 1270
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+H +I+ TG D +V N L+ MY KCG L S+ +F+ + + ++W++++ A
Sbjct: 1271 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHH 1330
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
GCGEEALK+F MR+ GV + + G L A +++ ++EEG QL+ ++ + G
Sbjct: 1331 GCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI-KLGFESDLHV 1389
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+ +D+ + G +H+ + Q + + W L+++ HG + +LK+
Sbjct: 1390 TNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLG 1448
Query: 575 P 575
P
Sbjct: 1449 P 1449
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 141/601 (23%), Positives = 250/601 (41%), Gaps = 116/601 (19%)
Query: 71 QNNTNFRIRPSTYADL-ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
Q +T++ IR + + S + S G+ +H + N ++NMY K G
Sbjct: 734 QQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFG 793
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
++E AR VFDEM RN SW+ M++G + G A+ L+ QM G+ P+ F S+I
Sbjct: 794 NIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLIT 853
Query: 190 ACSGLCCVG-LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
ACS + G Q+H V+K+ + AL+ Y + +A +F + ++
Sbjct: 854 ACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVV 913
Query: 249 SWGSMIDGFSK-------LDFARTVFNEMESPNLASW----------------------- 278
SW S++ G+S L+ + + E S N ++
Sbjct: 914 SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 973
Query: 279 ------------NTIIAGVASCSNANEAMSLFSEMGDRELIP----------DGLTVRSL 316
N++I+ +S S+ EA +F M + ++I GL SL
Sbjct: 974 IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESL 1033
Query: 317 LC---------------------ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
C C+S +L G IH ++K G SNV +CN +L
Sbjct: 1034 RCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLY 1093
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVM------------------------------- 382
+AG L+ + T+ D I++N +M
Sbjct: 1094 SEAGR-SEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 1152
Query: 383 ----GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
AC+ L +H I+ G + V N L+ MY K G + A+++ M
Sbjct: 1153 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 1212
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV-GLVEEGLQ 497
PD V+W++LI G+A+ EA+K ++ +R G+ N++T+V VL ACS L++ G+
Sbjct: 1213 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 1272
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ + G ++ ++ + A+ G ++ + + + + + W +++A+ H
Sbjct: 1273 IHAHIVLT-GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLG-NKSPITWNAMVAANAHH 1330
Query: 558 G 558
G
Sbjct: 1331 G 1331
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G LH + + + L +F N L++MY K G++ AR +F+ M + SWS+++ GY +
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG-LVEEGLQLYRIMQNEYGIIPTR 512
G EEA+ LF +M GV PN + ++TACS G + +EG Q++ + + GI+
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVV-KTGILGDV 881
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ +V G V+ A+ +M D ++V W SL+ GN
Sbjct: 882 YVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDSGN 927
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 321/619 (51%), Gaps = 72/619 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDF---LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHI 106
+ S+ L E+L F + L N TN +T + L+S CSS+ +L+ GR +H +
Sbjct: 369 MISAYAHHGLCRESLRCFHWMRHLHNETN----STTLSSLLSVCSSVDNLKWGRGIHGLV 424
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ + + N +L +Y + G EDA +VF M +R+++SW +M+A Q+G+ +
Sbjct: 425 VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGL 484
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
++ ++LQ G + + TF S + ACS C+ + +HA +I + LI NAL+ MY
Sbjct: 485 KILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMY 544
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
K +++A + V M P+ +WN +I G A
Sbjct: 545 GKLGMMMEA----------------------------KKVLQTMPQPDRVTWNALIGGHA 576
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNV 345
NEA+ + + ++ + + +T+ S+L AC++P L + GM IH++I+ GF S+
Sbjct: 577 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDD 636
Query: 346 PVCNAIL-----------------------------------QHQAGE-LFRLFSLMLAS 369
V N+++ H GE ++F M
Sbjct: 637 YVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNV 696
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
D +F+ + A A +A LE G QLH ++K G D+ V N MDMY KCG +
Sbjct: 697 GVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDV 756
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
++ + +SW+ LI +A+ GC ++A + F M G +P+HVT V +L+AC+H
Sbjct: 757 LKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHG 816
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
GLV+EGL Y M E+G+ P E C++DLL R+GR+ AE FI +M + + W+S
Sbjct: 817 GLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRS 876
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LLA+C+ HGN+++ ++ AE++L++DP++ +A VL N+ A+SGKWE+V L M +
Sbjct: 877 LLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNI 936
Query: 610 RKVPGQSWIEIQTKIHASG 628
+K P SW++++ K+H+ G
Sbjct: 937 KKQPACSWVKLKDKVHSFG 955
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 161/661 (24%), Positives = 284/661 (42%), Gaps = 119/661 (18%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
++ A V D R + W + S + LY EA+ F + + P+ + A
Sbjct: 145 IEHARYVFDEMRHRNEASWS-TMLSGYVRVGLYEEAVGLFCQMWG---LGVEPNGFMVAS 200
Query: 86 LISACS-SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
LI+ACS S G +VH ++ + D + +++ YG G + +A+ +F+EMP
Sbjct: 201 LITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 260
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NVVSWT+++ G S +G + +Y +M Q G+ +Q TF ++ +C L LG Q+
Sbjct: 261 NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 320
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK----- 259
H+I+ + N+LI+M++ F + +A VF + DI SW +MI ++
Sbjct: 321 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 380
Query: 260 -----LDFARTVFNEMESP--------------------------------NLASWNTII 282
+ R + NE S N+ NT++
Sbjct: 381 ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 440
Query: 283 AGVASCSNANEAMSLFSEMGDRELIP---------------DGL---------------- 311
+ + +A +F M +R+LI DGL
Sbjct: 441 TLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHV 500
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------- 352
T S L AC++P L + +H+ II GF+ + V NA++
Sbjct: 501 TFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM 560
Query: 353 -----------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS-LEMG 394
+ E + + L+ ++IT V+GAC+A L+ G
Sbjct: 561 PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHG 620
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+H +I+ TG D +V N L+ MY KCG L S+ +F+ + + ++W++++ A
Sbjct: 621 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHH 680
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
GCGEEALK+F MR+ GV + + G L A +++ ++EEG QL+ ++ + G
Sbjct: 681 GCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI-KLGFESDLHV 739
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+ +D+ + G +H+ + Q + + W L+++ HG + +LK+
Sbjct: 740 TNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLG 798
Query: 575 P 575
P
Sbjct: 799 P 799
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 142/602 (23%), Positives = 251/602 (41%), Gaps = 118/602 (19%)
Query: 71 QNNTNFRIRPSTYADL-ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
Q +T++ IR + + S + S G+ +H + N ++NMY K G
Sbjct: 84 QQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFG 143
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
++E AR VFDEM RN SW+ M++G + G A+ L+ QM G+ P+ F S+I
Sbjct: 144 NIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLIT 203
Query: 190 ACSGLCCVG-LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
ACS + G Q+H V+K+ + AL+ Y + +A +F + ++
Sbjct: 204 ACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVV 263
Query: 249 SWGSMIDGFSK-------LDFARTVFNEMESPNLASW----------------------- 278
SW S++ G+S L+ + + E S N ++
Sbjct: 264 SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 323
Query: 279 ------------NTIIAGVASCSNANEAMSLFSEMGDRELIP----------DGLTVRSL 316
N++I+ +S S+ EA +F M + ++I GL SL
Sbjct: 324 IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESL 383
Query: 317 LC---------------------ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
C C+S +L G IH ++K G SNV +CN +L
Sbjct: 384 RCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLY 443
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVM------------------------------- 382
+AG L+ + T+ D I++N +M
Sbjct: 444 SEAGR-SEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 502
Query: 383 ----GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
AC+ L +H I+ G + V N L+ MY K G + A+++ M
Sbjct: 503 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 562
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV-GLVEEGLQ 497
PD V+W++LI G+A+ EA+K ++ +R G+ N++T+V VL ACS L++ G+
Sbjct: 563 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 622
Query: 498 LY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
++ I+ G ++ ++ + A+ G ++ + + + + + W +++A+
Sbjct: 623 IHAHIVLT--GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLG-NKSPITWNAMVAANAH 679
Query: 557 HG 558
HG
Sbjct: 680 HG 681
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G LH + + + L +F N L++MY K G++ AR +F+ M + SWS+++ GY +
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG-LVEEGLQLYRIMQNEYGIIPTR 512
G EEA+ LF +M GV PN + ++TACS G + +EG Q++ + + GI+
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVV-KTGILGDV 231
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ +V G V+ A+ +M D ++V W SL+ GN
Sbjct: 232 YVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDSGN 277
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 196/616 (31%), Positives = 316/616 (51%), Gaps = 65/616 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L KQ ++EA+ + + + T+ ++ C + L GR+VH H++
Sbjct: 166 LVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRY 225
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + N ++ MY KCG ++ AR++FD MP+R+++SW AMI+G +NG + ++L+
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLF 285
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M + PD T S+I AC L LGR +HA+VI + + N+L MY
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYA 345
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+A +FS + KDI SW +MI G+ +N +
Sbjct: 346 GSWREAEKLFSRMDCKDIVSWTTMISGYE--------YNFL------------------- 378
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+A+ + M + PD +TV ++L AC + L G+++H IK S V V N
Sbjct: 379 -PEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 350 AILQ--------HQAGELF----------------------RLF-SLMLASQTK----PD 374
++ +A ++F R F +L+ Q K P+
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTLQPN 497
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
IT + ACA + +L G ++H ++++TG+ LD F+ N L+DMYV+CG + A FN
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN 557
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ DV SW+ L+ GY++ G G ++LF RM + VRP+ +T + +L C +V +
Sbjct: 558 -SQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQ 616
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
GL + M+ EYG+ P + +CVVDLL RAG + EA FI +M D VW +LL +C
Sbjct: 617 GLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H N+D+G+ +A+ I ++D + +LLCN+YA GKW EVA++ MKE G+ G
Sbjct: 676 RIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAG 735
Query: 615 QSWIEIQTKIHASGND 630
SW+E++ K+HA +D
Sbjct: 736 CSWVEVKGKVHAFLSD 751
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/575 (27%), Positives = 262/575 (45%), Gaps = 80/575 (13%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
LC EA+ + +Q + + L+ C R+ + G KV+ LSS
Sbjct: 69 LCANGKLEEAMKLLNSMQE-LRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
L N L M+ + G+L DA VF +M +RN+ SW ++ G ++ G + AI LY +ML
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187
Query: 174 Q-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
G+ PD +TF ++R C G+ + GR++H HV++ + + NALI MY K +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
A +F + R+DI SW +MI G+ + N M +
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFE--------NGM--------------------GH 279
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
E + LF M + PD +T+ S++ AC G IH+Y+I GF ++ VCN++
Sbjct: 280 EGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 353 Q--------HQAGELFR----------------------------LFSLMLASQTKPDHI 376
Q +A +LF + +M KPD I
Sbjct: 340 QMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEI 399
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T V+ ACA + L+ G +LH +K L V V N L++MY KC + A ++F+ +
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+V+SW+S+I G EAL FR+M+ + ++PN +TL L AC+ +G + G
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGK 518
Query: 497 QLY-RIMQNEYGI---IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+++ +++ G+ +P + ++D+ R GR++ A + N D+ W LL
Sbjct: 519 EIHAHVLRTGVGLDDFLP-----NALLDMYVRCGRMNIAWNQFNSQK--KDVSSWNILLT 571
Query: 553 SCKTHGNVDVGKRAAENILK--IDPTNSAALVLLC 585
G V + ++K + P + LLC
Sbjct: 572 GYSERGQGSVVVELFDRMVKARVRPDEITFISLLC 606
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 200/446 (44%), Gaps = 79/446 (17%)
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ G NG+ A++L M + + D+ F +++R C G ++++ + S +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
+ NA +AM+ +F ++DAW VF ++ +++ SW ++ G++K +
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY---------- 175
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEM---GDRELIPDGLTVRSLLCACTSPLSLYQG 329
+EA+ L+ M G + PD T +L C L +G
Sbjct: 176 ------------------FDEAICLYHRMLWVGG--VKPDVYTFPCVLRTCGGIPDLARG 215
Query: 330 MQIHSYIIKKGFYSNVPVCNAIL------------------------------------Q 353
++H ++++ G+ ++ V NA++
Sbjct: 216 REVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
E +LF M PD +T V+ AC + +G +H Y++ TG A+D+ V
Sbjct: 276 GMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L MY+ GS A +LF+ M+ D+VSW+++I GY E+A+ +R M V+
Sbjct: 336 NSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVK 395
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQN----EYGIIPTRERRSCVVDLLARAGRVH 529
P+ +T+ VL+AC+ +G ++ G++L+++ Y I+ ++++ ++ +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LINMYSKCKCID 450
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCK 555
+A D + + +++ W S++A +
Sbjct: 451 KALDIFHNIP-RKNVISWTSIIAGLR 475
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 122/286 (42%), Gaps = 43/286 (15%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E +L + M + D F ++ C + E G++++ + + +L V + N +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFL 136
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNH 476
M+V+ G+L A +F M + ++ SW+ L+ GYA+ G +EA+ L+ RM GV+P+
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDV 196
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
T VL C + + G +++ + YG + + ++ + + G V A +
Sbjct: 197 YTFPCVLRTCGGIPDLARGREVH-VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 537 QM----------------------------------AFDDDIVVWKSLLASCKTHGNVDV 562
+M + D D++ S++++C+ G+ +
Sbjct: 256 RMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 563 GKRAAENILKIDPTNSAALVLLCN----IYASSGKWEEVARLMGSM 604
G+ ++ T A + +CN +Y +G W E +L M
Sbjct: 316 GRDIHAYVI---TTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM 358
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 291/518 (56%), Gaps = 18/518 (3%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEM-PQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
D V +++ Y + G L DAR +FD +RNVV+WTA+++G ++ + A L+ +M
Sbjct: 72 DVVSWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARLVDEAEALFQRM 131
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
Q ++ ++ +++ A + VG L + + GS N L+A + +
Sbjct: 132 PQRNVV----SWNTMLEAYAAAGRVGDACALFDRMPVRDAGS----WNILLATLVRSGSV 183
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCS 289
A +F + +D+ +W +M+DG + K+D AR +F+ M N+ SWN +I+G
Sbjct: 184 DKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNH 243
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+EA+ LF +M +R++ + V + L + ++ + ++ + + N
Sbjct: 244 RIDEALDLFMKMPERDIASCNIMVTGFI----QNKDLKRARELFDEMPERNVVTWTTMMN 299
Query: 350 AILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
L+ + EL LFS ML + T+P+ +TF + AC+ +A+L G Q+H I KT
Sbjct: 300 GYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQF 359
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D FV + LM++Y KCG +G AR+LF+ + D++SW+ +I YA G G EA+ L+ +M+
Sbjct: 360 DAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQ 419
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+G RPN VT V +L+ACSH GLV+EGL+++ M N+ I E +C++DL +RAGR+
Sbjct: 420 ENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRL 479
Query: 529 HEAEDFINQMAFDD-DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+A+ I+ + VW +LL C HGN +G AA N+L+ +P N+ LL NI
Sbjct: 480 DDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLLQAEPDNAGTYTLLSNI 539
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
YAS+GKW+E A + M RG++K PG SWIE+ K+H
Sbjct: 540 YASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVH 577
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 23/245 (9%)
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP+ T+ + ACS L +L G++VH I + Q DA + + ++N+Y KCG + AR
Sbjct: 323 RPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARK 382
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+FD +++++SW +IA + +G AI LY +M ++G P+ T+ ++ ACS
Sbjct: 383 LFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGL 442
Query: 197 VGLGRQL-------HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
V G ++ + ++ EH LI + ++ R+ DA + + K +
Sbjct: 443 VDEGLKIFESMVNDRSIAVRDEH------YTCLIDLCSRAGRLDDAKRLIHYLKIKPASG 496
Query: 250 --WGSMIDG------FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
W +++ G S + A + E N ++ + AS EA + SEM
Sbjct: 497 SVWSALLGGCNAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEM 556
Query: 302 GDREL 306
+R L
Sbjct: 557 NNRGL 561
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L+ G + AR+LF+ D DVVSW++L+ YA+ G +A +LF R R
Sbjct: 46 NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDR---PDAR 102
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS--CVVDLLARAGRVHEA 531
N VT +L+ + LV+E L++ M P R S +++ A AGRV +A
Sbjct: 103 RNVVTWTALLSGYARARLVDEAEALFQRM-------PQRNVVSWNTMLEAYAAAGRVGDA 155
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
++M D W LLA+ G+VD +A E ++ + A + + A S
Sbjct: 156 CALFDRMPV-RDAGSWNILLATLVRSGSVD---KARELFGRMPERDVMAWTTMVDGVARS 211
Query: 592 GKWEEVARLMGSMKERGV 609
GK +E L SM ER V
Sbjct: 212 GKVDEARVLFDSMPERNV 229
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH- 120
EA++ ++ +Q N +R TY L+SACS + G K+ + +++ + AV H
Sbjct: 410 EAILLYEKMQEN-GYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSI--AVRDEHY 466
Query: 121 --ILNMYGKCGSLEDARMVFDEM---PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++++ + G L+DA+ + + P V W+A++ GC+ +G E+ +LQ+
Sbjct: 467 TCLIDLCSRAGRLDDAKRLIHYLKIKPASGSV-WSALLGGCNAHGNESIGNLAARNLLQA 525
Query: 176 GLMPDQ---FTFGSIIRACSG 193
PD +T S I A +G
Sbjct: 526 --EPDNAGTYTLLSNIYASAG 544
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 196/642 (30%), Positives = 323/642 (50%), Gaps = 70/642 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+ A V D R +W+ + K ++ A+ F ++ + + + TY ++
Sbjct: 163 IRDARRVFDELPLRDTILWNV-MLRGYVKSGDFDNAIGTFCEMRTSYSM-VNSVTYTCIL 220
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S C++ + G ++H ++ S + D + N ++ MY KCG+L AR +F+ MPQ + V
Sbjct: 221 SICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTV 280
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W +IAG QNG + A L+ M+ +G+ PD TF S + + + +++H+++
Sbjct: 281 TWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYI 340
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
++ + ++ALI +Y K + A +F D+ +MI G+
Sbjct: 341 VRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYV--------- 391
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
+ N+ + NT F + ++ + LT+ S+L AC + +L
Sbjct: 392 --LHGLNIDAINT-----------------FRWLIQEGMVTNSLTMASVLPACAAVAALK 432
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------ELFR------------------ 361
G ++H +I+KK + V V +AI A E FR
Sbjct: 433 PGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFS 492
Query: 362 ----------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
LF M S K D ++ + + A A + +L G ++H Y+++ + D F
Sbjct: 493 QNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTF 552
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L+DMY KCG+L A +FN M+ + VSW+S+I Y GC E L L+ M +G
Sbjct: 553 VASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAG 612
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+ P+HVT + +++AC H GLV+EG+ + M EYGI E +C+VDL RAGRVHEA
Sbjct: 613 IHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEA 672
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
D I M F D VW +LL +C+ HGNV++ K A+ ++L++DP NS VLL N++A +
Sbjct: 673 FDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADA 732
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH----ASGN 629
G+W V ++ MKE+GV+K+PG SWI++ H A GN
Sbjct: 733 GEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGN 774
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 157/574 (27%), Positives = 253/574 (44%), Gaps = 70/574 (12%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ LC AG + R+ W++ + L ++ AL+ F F +N
Sbjct: 56 YVLCGRFRDAGNLFFELELRYALPWNW-MIRGLYMLGWFDFALL-FYFKMLGSNVSPDKY 113
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +I AC L ++ L VHD S D + ++ +Y G + DAR VFDE+
Sbjct: 114 TFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDEL 173
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+ + W M+ G ++G + AI + +M S M + T+ I+ C+ G
Sbjct: 174 PLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGT 233
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH VI S N L+AMY+K +L
Sbjct: 234 QLHGLVIGSGFEFDPQVANTLVAMYSKCGNLL---------------------------- 265
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+AR +FN M + +WN +IAG +EA LF+ M + PD +T S L +
Sbjct: 266 YARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSIL 325
Query: 322 SPLSLYQGMQIHSYIIK---------------------------KGFYSN----VPVCNA 350
SL ++HSYI++ K F N V VC A
Sbjct: 326 ESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTA 385
Query: 351 -----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L + F ++ + +T V+ ACAA+A+L+ G +LHC+I+K
Sbjct: 386 MISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKR 445
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L V V + + DMY KCG L A E F M D D V W+S+I ++Q G E A+ LFR
Sbjct: 446 LENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFR 505
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLAR 524
+M SG + + V+L L+A +++ + G +++ +++N + S ++D+ ++
Sbjct: 506 QMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFS--SDTFVASTLIDMYSK 563
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
G + A N M ++ V W S++A+ HG
Sbjct: 564 CGNLALAWCVFNLMDGKNE-VSWNSIIAAYGNHG 596
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 221/514 (42%), Gaps = 68/514 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L ACS +Q R+VH ++ + +L +Y CG DA +F E+ R
Sbjct: 17 LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+ W MI G G + A+ Y +ML S + PD++TF +I+AC GL V L +H
Sbjct: 77 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
L + +ALI +Y I DA VF + +D W M+ G+ K
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVK------ 190
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+ + A+ F EM + + +T +L C + +
Sbjct: 191 ----------------------SGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGN 228
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELFR---------------- 361
G Q+H +I GF + V N ++ A +LF
Sbjct: 229 FCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAG 288
Query: 362 ------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
LF+ M+++ KPD +TF + + SL ++H YI++ + D
Sbjct: 289 YVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFD 348
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V++ + L+D+Y K G + AR++F DV +++I GY G +A+ FR +
Sbjct: 349 VYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ 408
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G+ N +T+ VL AC+ V ++ G +L+ I++ I S + D+ A+ GR+
Sbjct: 409 EGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVG--SAITDMYAKCGRL 466
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
A +F +M+ D D V W S+++S +G ++
Sbjct: 467 DLAYEFFRRMS-DRDSVCWNSMISSFSQNGKPEI 499
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 176/406 (43%), Gaps = 53/406 (13%)
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
S+ RACS V RQ+H VI G + ++ +Y R DA N+F + +
Sbjct: 16 SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75
Query: 246 DITSWGSMIDGFSKL---DFARTVFNEM----ESPNLASWNTIIAGVASCSNANEAMSLF 298
W MI G L DFA + +M SP+ ++ +I +N M +
Sbjct: 76 YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135
Query: 299 SEMGDRELIPDGLTVRSL-----LCACTSPLSLYQGMQIHSYIIK-KGFYSNVPVCNAIL 352
T RSL L A ++ + LY + YI + + +P+ + IL
Sbjct: 136 D------------TARSLGFHVDLFAGSALIKLYAD---NGYIRDARRVFDELPLRDTIL 180
Query: 353 QH-------QAGEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+ ++G+ F M S + + +T+ ++ CA + GTQLH ++
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+G D V N L+ MY KCG+L AR+LFN M D V+W+ LI GY Q G +EA
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300
Query: 463 LFRRMRSSGVRPNHVTLVGVLTAC------SHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
LF M S+GV+P+ VT L + H V + +R+ + Y +S
Sbjct: 301 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVY-------LKS 353
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG-NVD 561
++D+ + G V A Q D+ V ++++ HG N+D
Sbjct: 354 ALIDVYFKGGDVEMARKIFQQNIL-VDVAVCTAMISGYVLHGLNID 398
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 185/637 (29%), Positives = 319/637 (50%), Gaps = 93/637 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
++ DL+ C+ + LQ G+ +H +L + L N ++N+Y KCGS+ A++VF+ +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 142 PQRNVVSWTAMIAGCSQNGQENAA--IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
++VVSW +I G SQ G + +EL+ +M +P+ TF + A S
Sbjct: 72 TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFG 131
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q HA IK+ + + ++LI MY K +LDA VF +I ++ SW ++I G++
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 260 LDFA----------------------RTVFNEMESPNLASW------------------- 278
A +V + + P+L +
Sbjct: 192 ERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASV 251
Query: 279 -NTIIAGVASCSNANEAMSLFSEMGDRELI------------------------------ 307
N ++ C ++A F GD++ I
Sbjct: 252 GNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311
Query: 308 -PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV----------PVCNAILQHQA 356
P T ++ AC+ +L +G QIH Y +K G+ + C +++ +
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARK 371
Query: 357 G-ELFRLFSLMLASQTK-------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
G + + ++L + + P +T V+ AC+++A+LE G Q+H +K G +L
Sbjct: 372 GFDYLKEPDIVLWTSCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSL 431
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+V + + L MY KCGSL +F M D+++W+++I G +Q G G +AL+LF +R
Sbjct: 432 EVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELR 491
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+P++VT V VL+ACSH+GLVE G +R+M +E+GIIP E +C+VD+L+RAG++
Sbjct: 492 HGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKL 551
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
HE ++FI D + +W+ LL +C+ + N ++G A E ++++ S+A +LL +IY
Sbjct: 552 HETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIY 611
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ G+ ++V R+ MK RGV K PG SWIE+++++H
Sbjct: 612 TALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVH 648
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 200/495 (40%), Gaps = 98/495 (19%)
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
L P +F ++ C+ + G+ +HA ++++ S + N+L+ +Y K I+ A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF SI KD+ SW +I+G+S+ F M
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSF--------------------------VME 99
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK------------------ 338
LF M +P+G T + A +S + G+Q H+ IK
Sbjct: 100 LFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYC 159
Query: 339 --------KGFYSNVPVCNAI----------LQHQAGELFRLFSLMLASQTKPDHITFND 380
+ + +P N + ++ A E + LF LM + D +
Sbjct: 160 KIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTS 219
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V+ A + G Q+HC +K GL V N L+ MY KCG L A + F D D
Sbjct: 220 VLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKD 279
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
++WS++I GYAQ G EAL LF M +G +P+ T VGV+ ACS +G +EEG Q++
Sbjct: 280 DITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIH- 338
Query: 501 IMQNEYGIIPTRE----RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK-------- 548
Y + E R L A+ G + +A + + + DIV+W
Sbjct: 339 ----GYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLK-EPDIVLWTSCRMQMER 393
Query: 549 ---------SLLASCKTHGNVDVGKRAAENILKID-----PTNSAALVLLCNIYASSGKW 594
S+L +C + ++ GK+ +K P SA L +YA G
Sbjct: 394 IMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSA----LSTMYAKCGSL 449
Query: 595 EEVARLMGSMKERGV 609
E+ + M R +
Sbjct: 450 EDGNLVFRRMPSRDI 464
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 211/712 (29%), Positives = 332/712 (46%), Gaps = 113/712 (15%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
+ + + V D+F + +W L + EA+ + + +I + +
Sbjct: 48 IFESSKRVFDTFPKPDSFMWGV-LIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSV 106
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ ACS L +G KVH ++ + DAV+ +L MYG+ L+DA FD MP R+V
Sbjct: 107 LKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDV 166
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
V+W++++ QNGQ + ++++ QM+ + PD T S+ ACS L + LGR +H +
Sbjct: 167 VAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGY 226
Query: 207 VIKSEHGSHLISQNALIAMYTKF------DRILD-------------------------A 235
V++ E S+ N+LI MY K +R+ + A
Sbjct: 227 VVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEA 286
Query: 236 WNVFSSI-------------------ARKDITSWGSMIDGF-------SKLDF------- 262
NVF+ + AR G + GF +LDF
Sbjct: 287 LNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALME 346
Query: 263 ----------ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
VF ++ + SWNT+I+ EA+ LF +M + L+PD +
Sbjct: 347 LYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 406
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR--- 361
+ S L AC + G QIH YIIK G +++ V NA++ H A ++F
Sbjct: 407 LASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIK 465
Query: 362 -------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
LF M + K D +TF V+ AC+ + LE G
Sbjct: 466 EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKW 525
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H ++ GL D ++ L DMY KCG L A +F+ M + +VSWS +I GY G
Sbjct: 526 VHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQ 585
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
+ LF +M SG++PN +T + +L+ACSH G VEEG +LY +E+G+ P + +
Sbjct: 586 INATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG-KLYFNSMSEFGVEPKHDHFA 644
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL+RAG ++ A I + F + +W +LL C+ H +D+ K +N+L +D
Sbjct: 645 CMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTA 704
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
++ LL NIYA G W++ ++ MK +G+RKVPG S IEI KI+ G
Sbjct: 705 DTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFG 756
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/570 (21%), Positives = 255/570 (44%), Gaps = 82/570 (14%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y L C++ +L ++H H+ + ++ Y + G E ++ VFD P
Sbjct: 4 YMPLFRRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ + W +I G A+ LY +M+ Q F F S+++ACSG + +G
Sbjct: 61 KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++H VIK S + + +L+ MY + + DA F ++ +D+ +W S++ L+
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIV-----LN 175
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F + A+E + +FS+M + PD +T+ S+ AC+
Sbjct: 176 FVQN-----------------------GQASEGLDMFSQMISEAVEPDSVTMLSVTEACS 212
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------------- 352
SL G +H Y++++ SN + N+++
Sbjct: 213 ELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTP 272
Query: 353 ----QHQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+Q+G E +F+ M + +P+ +T V+ ACA + ++ G +H ++++
Sbjct: 273 MISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRA 332
Query: 406 LALDV-FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
+ ++ F+ LM++Y G+L ++F +++ ++SW++LI + + G EEAL LF
Sbjct: 333 MDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLF 392
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLL 522
+M++ G+ P+ +L L+AC + + G Q+ Y I + ++ ++D+
Sbjct: 393 VQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV----QNALIDMY 448
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNS 578
A+ G VH A ++ + +V W S++ +G + + + N +K+D
Sbjct: 449 AKCGFVHSANKMFEKIK-EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTF 507
Query: 579 AALVLLCNI--YASSGKWEEVARLMGSMKE 606
+++ C+ Y GKW +M +++
Sbjct: 508 LSVIQACSHLGYLEKGKWVHHKLIMYGLRK 537
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 312/640 (48%), Gaps = 72/640 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFD-DIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
C + A V D+ + + +W+ + K + E+L+ F+ + I P +
Sbjct: 356 CGDMGSARRVFDAMPSKGNVHVWNL-IMGGYAKAAEFEESLLLFEQMHE---LGITPDEH 411
Query: 84 AD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
A L+ + L + G H +++ + N +++ Y K +++A +VFD M
Sbjct: 412 ALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRM 471
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P ++ +SW ++I+GC+ NG + AIEL+V+M G D T S++ AC+ +GR
Sbjct: 472 PHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGR 531
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H + +K+ NAL+ MY+ + + W S
Sbjct: 532 VVHGYSVKTGLIGETSLANALLDMYS------------------NCSDWHS--------- 564
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+F M N+ SW +I ++ L EM + PD V S+L
Sbjct: 565 -TNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFA 623
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------- 353
SL QG +H Y I+ G +PV NA+++
Sbjct: 624 GDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNT 683
Query: 354 --------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ A E F LFS ML Q KP+ +T ++ A A+++SLE G ++H Y ++ G
Sbjct: 684 LIGGYSRNNFANESFSLFSDMLL-QFKPNTVTMTCILPAVASISSLERGREIHAYALRRG 742
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
D + N L+DMYVKCG+L AR LF+ + +++SW+ +I GY GCG++A+ LF
Sbjct: 743 FLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFE 802
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+MR SGV P+ + +L AC H GL EG + + M+ EY I P + +C+VDLL+
Sbjct: 803 QMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHT 862
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G + EA +FI M + D +W SLL C+ H +V + ++ A+ + K++P N+ VLL
Sbjct: 863 GNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLA 922
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA + +WE V +L + RG+R+ G SWIE++ K+H
Sbjct: 923 NIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVH 962
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 142/575 (24%), Positives = 243/575 (42%), Gaps = 70/575 (12%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDI--WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRI 78
A+ C L A V D R D+ W L S+ K + E + F +Q +
Sbjct: 139 AYLKCGDLGGARMVFDEMPPRVADVRVWT-SLMSAYAKAGDFQEGVSLFRQMQCCG---V 194
Query: 79 RPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P +A ++ +SL S+ G +H + + N ++ +Y +CG +EDA
Sbjct: 195 SPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQ 254
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD M R+ +SW + I+G NG + A++L+ +M G T S++ AC+ L
Sbjct: 255 VFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+G+ +H + +KS L+ L ++ + D L + VF + D+ S
Sbjct: 315 ELVGKVVHGYSMKSG----LLWD--LESVQSGIDEALGSKLVFMYVKCGDMGS------- 361
Query: 257 FSKLDFARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
AR VF+ M S N+ WN I+ G A + E++ LF +M + + PD +
Sbjct: 362 ------ARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSC 415
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------- 356
LL T G+ H Y++K GF + VCNA++ A
Sbjct: 416 LLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQD 475
Query: 357 -----------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
E LF M + D T V+ ACA +G +H
Sbjct: 476 TISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHG 535
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
Y +KTGL + + N L+DMY C S ++F M +VVSW+++I Y + G ++
Sbjct: 536 YSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDK 595
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSC 517
L + M G++P+ + VL + +++G + Y I ++P +
Sbjct: 596 VAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPV---ANA 652
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
++++ + EA + + + DI+ W +L+
Sbjct: 653 LMEMYVNCRNMEEARLVFDHVT-NKDIISWNTLIG 686
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 137/547 (25%), Positives = 217/547 (39%), Gaps = 85/547 (15%)
Query: 66 AFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILNM 124
A L ++ +R +Y ++ C RSL+ R+ H + + +VL ++
Sbjct: 82 ALRLLGSDGGVGVR--SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLA 139
Query: 125 YGKCGSLEDARMVFDEMPQR--NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
Y KCG L ARMVFDEMP R +V WT++++ ++ G + L+ QM G+ PD
Sbjct: 140 YLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAH 199
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
+++ + L + G +H + K G NALIA+Y++ + DA VF S+
Sbjct: 200 AVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM 259
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+D SW S I G+ F+ W+ + A+ LFS+M
Sbjct: 260 HARDAISWNSTISGY---------FSN-------GWH------------DRAVDLFSKMW 291
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY-------------------- 342
+TV S+L AC G +H Y +K G
Sbjct: 292 SEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVF 351
Query: 343 ---------------------SNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHI 376
NV V N I+ A E LF M PD
Sbjct: 352 MYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEH 411
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
+ ++ ++ G H Y++K G V N L+ Y K + +A +F+ M
Sbjct: 412 ALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRM 471
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC--SHVGLVEE 494
D +SW+S+I G G EA++LF RM G + TL+ VL AC SH V
Sbjct: 472 PHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGR 531
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
+ Y + + G+I + ++D+ + H MA ++V W +++ S
Sbjct: 532 VVHGYSV---KTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMA-QKNVVSWTAMITSY 587
Query: 555 KTHGNVD 561
G D
Sbjct: 588 TRAGLFD 594
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK-TGLALDVFVM 413
QAG+L L L S ++ V+ C SLE + H + TG + +
Sbjct: 75 QAGDLAAALRL-LGSDGGVGVRSYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLG 133
Query: 414 NGLMDMYVKCGSLGSARELFNFMED--PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
L+ Y+KCG LG AR +F+ M DV W+SL+ YA+ G +E + LFR+M+ G
Sbjct: 134 KRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCG 193
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
V P+ + VL + +G + EG ++ +++ + G+ + ++ L +R G + +A
Sbjct: 194 VSPDAHAVSCVLKCIASLGSITEGEVIHGLLE-KLGLGEACAVANALIALYSRCGCMEDA 252
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHG 558
+ M D + W S ++ ++G
Sbjct: 253 MQVFDSM-HARDAISWNSTISGYFSNG 278
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 299/573 (52%), Gaps = 75/573 (13%)
Query: 98 LGRKVHDHILSSKCQPDAVLH--NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L R +H L+ K A ++ N+I++ Y KCG + A +F E QR+ VSW MIAG
Sbjct: 15 LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG---LGRQLHAHVIKSEH 212
G A+E M + G D ++FGSI++ G+ CVG +G+Q+H+ ++K +
Sbjct: 75 FVNLGNFETALEFLKSMKRYGFAVDGYSFGSILK---GVACVGYVEVGQQVHSMMVKMGY 131
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
++ + +AL+ MY K +R+ DA+ VF SI +
Sbjct: 132 EGNVFAGSALLDMYAKCERVEDAFEVFKSINIR--------------------------- 164
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
N +WN +I+G A + A L M + D T LL P Q+
Sbjct: 165 -NSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQV 223
Query: 333 HSYIIKKGFYSNVPVCNAI-------------------------LQH-----------QA 356
H+ I+K G S+ VCNAI L H Q+
Sbjct: 224 HAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQS 283
Query: 357 G---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
G + + F M + DH F+ V+ +C+ +A+L++G Q+H ++K+G + FV
Sbjct: 284 GLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVA 343
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ L+ MY KCG + AR+ F+ ++W+SLI GYAQ G G+ AL LF M+ V+
Sbjct: 344 SSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVK 403
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+H+T V VLTACSH+GLVEEG + M+++YGI P E +C++DLL RAGR+ EA+
Sbjct: 404 LDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKA 463
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
I M F+ D +VWK+LL +C+T G++++ + A ++L+++P VLL +++ +
Sbjct: 464 LIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRR 523
Query: 594 WEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
W E A + MKERGV+KVPG SWIE++ ++ +
Sbjct: 524 WNEKASIKRLMKERGVKKVPGWSWIEVKNEVRS 556
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 181/425 (42%), Gaps = 67/425 (15%)
Query: 65 VAFDFLQN--NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
A +FL++ F + ++ ++ + + +++G++VH ++ + + + +L
Sbjct: 83 TALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALL 142
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+MY KC +EDA VF + RN V+W A+I+G +Q G A L M G+ D
Sbjct: 143 DMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDG 202
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF-SS 241
TF ++ L Q+HA ++K S NA+I Y++ I DA VF +
Sbjct: 203 TFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGA 262
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
I +D+ + SWN+I+ G + + +A+ F M
Sbjct: 263 IETRDL--------------------------DHVSWNSILTGFSQSGLSEDALKFFENM 296
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------- 352
+ ++ D ++L +C+ +L G Q+H ++K GF N V ++++
Sbjct: 297 RSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVI 356
Query: 353 --------------------------QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGAC 385
QH G++ LF LM + K DHITF V+ AC
Sbjct: 357 EDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTAC 416
Query: 386 AAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVS 443
+ + +E G + L G+ + ++D+ + G L A+ L M +PD +
Sbjct: 417 SHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMV 476
Query: 444 WSSLI 448
W +L+
Sbjct: 477 WKTLL 481
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 171/395 (43%), Gaps = 46/395 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A EV S R W+ L S + A D ++ I
Sbjct: 143 DMYAKCERVEDAFEVFKSINIRNSVTWN-ALISGYAQVGDRGTAFWLLDCMELE-GVEID 200
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+A L++ +L +VH I+ D + N I+ Y +CGS+EDA VFD
Sbjct: 201 DGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFD 260
Query: 140 ---EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
E + VSW +++ G SQ+G A++ + M ++ D + F +++R+CS L
Sbjct: 261 GAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLAT 320
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ LG+Q+H V+KS + ++LI MY+K I DA F + + +W
Sbjct: 321 LQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAW------ 374
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
N++I G A A+ LF M DR + D +T ++
Sbjct: 375 ----------------------NSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAV 412
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSN--VP------VCNAILQHQAGELFRLFSLMLA 368
L AC+ + G+ + K S+ +P C L +AG L +L+ A
Sbjct: 413 LTACS-----HIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEA 467
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+PD + + ++GAC +E+ +Q+ ++++
Sbjct: 468 MPFEPDAMVWKTLLGACRTCGDIELASQVASHLLE 502
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 297/534 (55%), Gaps = 48/534 (8%)
Query: 130 SLEDARMVFDEMPQR------NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
S+ D R +P++ NV MI S++G+ A L+ +M + PD T
Sbjct: 45 SINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMRE----PDVIT 100
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+ ++I SG G+ + + + ++++ A++ Y + ++I DA +F+ +
Sbjct: 101 WTTVI---SGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP 157
Query: 244 RKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
K++ SW +MIDG++ ++D A +F +M N+ SWNT+++ +A C EA LF
Sbjct: 158 NKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDR 217
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGM---------QIHSYIIKKG-------FYSN 344
M +R++I + LL L L++ M + + +I+ G ++
Sbjct: 218 MPERDVISWTAMIAGLL---DEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNE 274
Query: 345 VPVCNAI----------LQHQAGELFRLFSLMLASQ-TKPDHITFNDVMGACAAMASLEM 393
+P N I + ++ E ++FS ML++ KP+ TF V+GAC+ +A L
Sbjct: 275 MPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGE 334
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN--FMEDPDVVSWSSLIVGY 451
G Q+H I KT FV++ L++MY KCG LG+AR++F+ D+VSW+ +I Y
Sbjct: 335 GQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAY 394
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G G+EA+ F+ MR SG +P+ VT VG+L+ACSH GLVEEGL+ + + + I+
Sbjct: 395 AHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVR 454
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
+ +C+VDL RAGR+ EA FI ++ VW +LLA C H NV +GK+AA+ +L
Sbjct: 455 EDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLL 514
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++P N+ +LL NIYAS+GKW E AR+ MK++G++K PG SWIE+ ++H
Sbjct: 515 EVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVH 568
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 133/276 (48%), Gaps = 38/276 (13%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSI 187
G L AR +F+EMP++NV+SWT MI GC Q G+ A++++ +ML + G P+Q TF S+
Sbjct: 263 GDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSV 322
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+ ACS L +G G+Q+H + K+ + +ALI MY+K + A +F
Sbjct: 323 LGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD------- 375
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
DG + +L SWN IIA A EA++ F EM
Sbjct: 376 -------DGMT------------SQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFK 416
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQI-------HSYIIKKGFYSNVPVCNAILQHQAGELF 360
PD +T LL AC+ + +G++ S ++++ Y+ C L +AG L
Sbjct: 417 PDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYA----CLVDLCGRAGRLK 472
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
F + +TKP + ++ C A++++G Q
Sbjct: 473 EAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQ 508
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 14/257 (5%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EAL F + + + T+ ++ ACS+L L G++VH I + Q + + +
Sbjct: 298 EALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSAL 357
Query: 122 LNMYGKCGSLEDARMVFDE--MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+NMY KCG L AR +FD+ QR++VSW +IA + +G AI + +M +SG P
Sbjct: 358 INMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKP 417
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN---ALIAMYTKFDRILDAW 236
D T+ ++ ACS V G + ++K S L+ ++ L+ + + R+ +A+
Sbjct: 418 DDVTYVGLLSACSHAGLVEEGLKYFDELVKDR--SILVREDHYACLVDLCGRAGRLKEAF 475
Query: 237 NVFSSIARKDITS-WGSMIDG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASCS 289
+ K WG+++ G + + + E+E N ++ + AS
Sbjct: 476 GFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTG 535
Query: 290 NANEAMSLFSEMGDREL 306
EA + +M D+ L
Sbjct: 536 KWREAARVRLKMKDKGL 552
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 302/580 (52%), Gaps = 76/580 (13%)
Query: 86 LISACSSLRSLQLGRKVHDH-ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
L+ C+S +SLQ ++H I+++ +P+ +LH I +A ++F ++P
Sbjct: 37 LLKQCTSTKSLQ---QIHTQMIINAIHKPNFLLHRFI-----DLKDFNNASLLFSQIPYP 88
Query: 145 NVVSWTAMIAGCSQNGQE-NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
N ++ MI G + Q+ N IE Y QM G+ P+ FT+ + AC+ L + G+
Sbjct: 89 NEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCA 148
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H+ V+KS + +++LI MY++ +L A
Sbjct: 149 HSGVLKSGLCADGHVRHSLITMYSRC----------------------------GELGCA 180
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
R VF+E+ +L SWN++I+G + A +A+ LF EM D PD +T+ S+L AC
Sbjct: 181 RRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDL 240
Query: 324 LSLYQGMQIHSYIIKK-------------GFY------------------SNVPVCNAIL 352
L G I ++++ G Y +V NA++
Sbjct: 241 GDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMI 300
Query: 353 QHQA-----GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
A E LFS M S PD IT V+ ACA++ +L+ G L Y + GL
Sbjct: 301 TGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQ 360
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D++V L+DMY KCGSL A +F M + VSW+++I A G +E+L LF+RM
Sbjct: 361 NDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRM 420
Query: 468 RSSG--VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
G VRPN ++ +GVL+AC H GLV+EG QL+ +M + +G++P E SC+VDLLARA
Sbjct: 421 SKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARA 480
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G VHEA DFI +M D VV +LL +C+ NVDV +R +L+++P NS ++
Sbjct: 481 GHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISS 540
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
I+A+ +W++ AR+ M++RGV K PG SWIEI+ ++H
Sbjct: 541 KIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVH 580
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 224/481 (46%), Gaps = 68/481 (14%)
Query: 38 FLRRFDDIWDFD----LFSSLCKQNLY-------------NEALVAFDFLQNNTNFRIRP 80
L RF D+ DF+ LFS + N Y + + +F +F IRP
Sbjct: 65 LLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRP 124
Query: 81 S--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ TY + AC++L L G+ H +L S D + + ++ MY +CG L AR VF
Sbjct: 125 NNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVF 184
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
DE+ ++++VSW +MI+G S+ G A+ L+ +M +G PD+ T SI+ AC L +G
Sbjct: 185 DEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLG 244
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG + V+++E + +ALI MY K + A VF + +KD+ +W +MI G++
Sbjct: 245 LGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYA 304
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ GV ++EA+ LFS M + + PD +T+ +L
Sbjct: 305 Q-----------------------NGV-----SDEAIILFSGMRESGVNPDKITLVGVLS 336
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKP 373
AC S +L G + +Y ++G +++ V A++ A + R+F M +
Sbjct: 337 ACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDM----PQK 392
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL---DVFVMNGLMDMYVKCGSLGSAR 430
+ +++N ++ A A + L + K G A+ D+ + G++ V G + R
Sbjct: 393 NEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFI-GVLSACVHAGLVDEGR 451
Query: 431 ELFNFMED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+LF+ M P + S ++ A+ G EA +M +P+ V L +L A
Sbjct: 452 QLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPE---KPDEVVLGALLGA 508
Query: 486 C 486
C
Sbjct: 509 C 509
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/644 (31%), Positives = 320/644 (49%), Gaps = 75/644 (11%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
A+ C + A D+ R+ D W + ++ + Y AL + + N P
Sbjct: 67 AYGKCGSVASARVAFDAIARKNDYSWG-SMLTAYAQNGHYRAALDLYKRMDLQPN----P 121
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSK-CQPDAVLHNHILNMYGKCGSLEDARMVFD 139
Y ++ AC+S+ +L+ G+ +H I +K + D +L N +L MY KCGSLEDA+ +F+
Sbjct: 122 VVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFE 181
Query: 140 EMP-QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
M +R+V SW AMIA +Q+G AI LY M + P TF S++ ACS L +
Sbjct: 182 RMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLD 238
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GR++HA + L QNAL+ MY + + DA +F + R+D+ S
Sbjct: 239 QGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVS--------- 289
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
W+ +IA A +EA+ +S+M + P+ T S+L
Sbjct: 290 -------------------WSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLL 330
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR--------L 362
AC S L G +H I+ G+ + A++ +A LF L
Sbjct: 331 ACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGL 390
Query: 363 FSLMLASQTKPDH---------------------ITFNDVMGACAAMASLEMGTQLHCYI 401
+++++ +K H I ++ V+ ACA++ + Q H I
Sbjct: 391 WTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDI 450
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
G+ D + L++MY + G+L SAR++F+ M D ++W++LI GYA+ G AL
Sbjct: 451 EADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLAL 510
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
L++ M G P+ +T + VL ACSH GL E+G QL+ +Q++Y + P SC++DL
Sbjct: 511 GLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDL 570
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L+RAGR+ +AE+ IN M + + V W SLL + + H +V AA I K+DP + A+
Sbjct: 571 LSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASY 630
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N++A +G +A + +M RGV+K G SWIE+ +IH
Sbjct: 631 VLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIH 674
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 248/545 (45%), Gaps = 82/545 (15%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPST-YADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
K++L + F + R S Y D + C L S+ R++HD I S +
Sbjct: 2 KRSLAPAKVRRFQLKEEKAGSRFDSSGHYRDALRQCQDLESV---RQIHDRI-SGAASAN 57
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
L N I+ YGKCGS+ AR+ FD + ++N SW +M+ +QNG AA++LY +M
Sbjct: 58 VFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM-- 115
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL--ISQNALIAMYTKFDRI 232
L P+ + +++ AC+ + + G+ +H+ I G L I +N+L+ MY K +
Sbjct: 116 -DLQPNPVVYTTVLGACASIEALEEGKAIHSR-ISGTKGLKLDVILENSLLTMYAKCGSL 173
Query: 233 LDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
DA +F ++ R+ ++S WN +IA A +
Sbjct: 174 EDAKRLFERMSGRRSVSS----------------------------WNAMIAAYAQSGHF 205
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
EA+ L+ +M ++ P T S+L AC++ L QG +IH+ I +G ++ + NA+
Sbjct: 206 EEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNAL 262
Query: 352 LQHQA------------------------------------GELFRLFSLMLASQTKPDH 375
L A E +S M +P++
Sbjct: 263 LTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNY 322
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
TF V+ ACA++ L G +H I+ G + + L+D+Y GSL AR LF+
Sbjct: 323 YTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQ 382
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP-NHVTLVGVLTACSHVGLVEE 494
+E+ D W+ LI GY++ G L+L+R M+++ P + V++AC+ +G +
Sbjct: 383 IENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFAD 442
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
Q + ++ + G+I + +V++ +R G + A ++M+ D + W +L+A
Sbjct: 443 ARQAHSDIEAD-GMISDFVLATSLVNMYSRWGNLESARQVFDKMS-SRDTLAWTTLIAGY 500
Query: 555 KTHGN 559
HG
Sbjct: 501 AKHGE 505
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 304/582 (52%), Gaps = 71/582 (12%)
Query: 86 LISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
L+ S S++LGR VH I+ + P L N+++NMY K E AR+V P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NVVSWT++I+G +QNG + A+ + +M + G++P+ FTF +A + L G+Q+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
A +K RILD VF + D+ + D AR
Sbjct: 132 ALAVKC-------------------GRILD---VFVGCSAFDMYCKTRLRDD------AR 163
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+F+E+ NL +WN I+ + EA+ F E + P+ +T + L AC+ L
Sbjct: 164 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWL 223
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQAGELFRLFSLM----------- 366
L GMQ+H +++ GF ++V VCN ++ Q ++ E+ +F+ M
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI--IFTEMGTKNAVSWCSL 281
Query: 367 ---------------LASQTKPDHITFND-----VMGACAAMASLEMGTQLHCYIMKTGL 406
L +++ D + +D V+ ACA MA LE+G +H + +K +
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+FV + L+DMY KCG + + + F+ M + ++V+ +SLI GYA G + AL LF
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 467 M--RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M R G PN++T V +L+ACS G VE G++++ M++ YGI P E SC+VD+L R
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG V A +FI +M I VW +L +C+ HG +G AAEN+ K+DP +S VLL
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 521
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N +A++G+W E + +K G++K G SWI ++ ++HA
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHA 563
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 15/297 (5%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLC--KQNLYNEALVAFDFLQNN 73
C +D + L D A ++ D R + W+ + +S+ + EA + F + +
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
N T+ ++ACS L LG ++H +L S D + N +++ YGKC +
Sbjct: 207 PN----SITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
+ ++F EM +N VSW +++A QN ++ A LY++ + + F S++ AC+G
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+ + LGR +HAH +K+ + +AL+ MY K I D+ F + K++ + S+
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 254 IDGFS---KLDFARTVFNEM------ESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
I G++ ++D A +F EM +PN ++ ++++ + M +F M
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/601 (33%), Positives = 311/601 (51%), Gaps = 72/601 (11%)
Query: 40 RRFDDIWDFDLF--SSLCK----QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
+ FDD+ D LF +++ K + + +AL FD + + T+ +I ACS +
Sbjct: 138 KLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVM 197
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
L +G +H L S + + N +L MY CG + AR VF+ M +R+VVSW MI
Sbjct: 198 SMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMI 257
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+G QNG+ A+ ++ M+ + + PD T S + +C L + LG ++H V K+
Sbjct: 258 SGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQ 317
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ +NAL+ MY++ G M D A VF E +
Sbjct: 318 EKIEVRNALVDMYSRC---------------------GGM-------DEASLVFAETKEK 349
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ +W ++I G NA A++L M ++P+ +T+ SLL AC S L QG +H
Sbjct: 350 DVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLH 409
Query: 334 SYIIKKGFYSNVPV----------CNAI------------------------LQHQ--AG 357
+++++K S+V V CNA+ L H A
Sbjct: 410 AWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAR 469
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E LF ML + + +H TFN V+ A A +A L+ LH Y++++G + V+ GL+
Sbjct: 470 EAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLI 529
Query: 418 DMYVKCGSLGSARELFNFM--EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
DMY KCGSL A ++F+ + ++ D++ WS LI GY G GE A+ LF +M SG++PN
Sbjct: 530 DMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPN 589
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
+T VL ACSH GLV++GL L++ M Y P +CVVDLL RAGR+ EA D I
Sbjct: 590 EITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLI 649
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWE 595
M F + +W +LL +C H NV++G+ AAE + +++P ++ +LL NIYA+ G+W+
Sbjct: 650 KSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWK 709
Query: 596 E 596
+
Sbjct: 710 D 710
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 115/246 (46%), Gaps = 16/246 (6%)
Query: 386 AAMASLEMGTQLHCYIMKTGLALD---VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
AA SL LH + + +GL + + + L Y CG + AR+LF+ + DP +
Sbjct: 90 AATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLF 149
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLY-R 500
W+++I Y G +AL++F M SG P+ T V+ ACS + ++ G+ ++ R
Sbjct: 150 LWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGR 209
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+ + G ++ ++ + G+V A N M +V W ++++ +G
Sbjct: 210 ALVS--GFSSNMFVQNSLLAMYMNCGKVGLARQVFNVM-LKRSVVSWNTMISGWFQNGRP 266
Query: 561 DVGKRAAENIL--KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+ +++ +++P +SA +V + S G +E+ +G + V+K Q I
Sbjct: 267 EEALAVFNSMMDARVEP-DSATIV---SALPSCGHLKELE--LGIKVHKLVQKNHLQEKI 320
Query: 619 EIQTKI 624
E++ +
Sbjct: 321 EVRNAL 326
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/625 (30%), Positives = 308/625 (49%), Gaps = 112/625 (17%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D N+ILN Y KC L A ++FDEMP R+ VSW MIAG G A+ ++ M
Sbjct: 32 DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
G D++TFGS+++ + LG+Q+H+ +IK + ++ + +AL+ MY K +++
Sbjct: 92 SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF-------------------------N 268
DA+ F SI++ + SW +MI+G+++ T F +
Sbjct: 152 DAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLD 211
Query: 269 EMESPNLASW-----------------NTIIAGVASCSNANEAMSLF-SEMGDRELI--- 307
+ + NL S N +I + C + ++A +F S G R+L+
Sbjct: 212 DADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWN 271
Query: 308 ----------------------------PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
PD + S++ AC + G +H +IK+
Sbjct: 272 SLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKR 331
Query: 340 GFYSNVPVCNAILQ-----------------------------------HQAG---ELFR 361
GF +VP+ NA++ Q G + +
Sbjct: 332 GFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVK 391
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F M ++ DH +F+ V+ +C+ +A+ ++G Q+H +K GL + FV + L+ MY
Sbjct: 392 SFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYS 451
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG + AR F ++W++L+ GYAQ G AL LF M V+ +H+T V
Sbjct: 452 KCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVA 511
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VLTACSH+GLVE+G + R M+++YG+ P E +C VDL R+GR+ EA+ I +M F
Sbjct: 512 VLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFK 571
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D VWK+ L +C++ GN+++ + A ++L+++P VLL N+Y + +W+E A++
Sbjct: 572 PDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVK 631
Query: 602 GSMKERGVRKVPGQSWIEIQTKIHA 626
MKERGV+KVPG SWIE+ +HA
Sbjct: 632 RLMKERGVKKVPGWSWIEVNNNVHA 656
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H +K G DV+ N +++ Y KC L SA LF+ M D VSW+++I G+ G
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E + + R MRS G + T +L + G+ G Q++ I+ + G S
Sbjct: 81 EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII-KMGYAENVYAGSA 139
Query: 518 VVDLLARAGRVHEA 531
++D+ A+ ++ +A
Sbjct: 140 LLDMYAKCEKLEDA 153
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 293/575 (50%), Gaps = 67/575 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDH--ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
Y+ L+ + + + G+ VH I SS PD L+ ++ Y G + AR VFD
Sbjct: 14 YSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDG 73
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP R+VVSWTAM++G ++N + A++L+ ML+SG P+QFTFGS +RAC+G C G
Sbjct: 74 MPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARSG 133
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+HA K + Q+AL+ M+ + + DA
Sbjct: 134 EQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDA------------------------- 168
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
R +F EME +L SWN+++ G + N+A+ LF M ++PD T S L AC
Sbjct: 169 ---RRLFAEMERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLPDHFTFGSALKAC 225
Query: 321 TSPLSLYQGMQIHSYIIKKGFY-SNVPVCNAILQHQ------------------------ 355
+ L+ IH+ IIK G++ NV + + I +
Sbjct: 226 GAISVLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDSMCEPDLVSST 285
Query: 356 ------------AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ + +LF + + D I + ++G CA +AS++ GTQ+H Y+ K
Sbjct: 286 ALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHK 345
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
D+ + N L+DMY K G +R F+ M + +V+SW+SLI AQ G GE+A+ L
Sbjct: 346 KQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTL 405
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM GV+PN VT + +L+ACSH G++ +G++ + M ++YGI P + S VDLLA
Sbjct: 406 FARMEEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLA 465
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
R G++ +A + + ++ ++L +CK HGN+ +G+ AA+N+L IDP +S +
Sbjct: 466 RGGQLEDAWMLVQNTNTECKSSMYGTMLGACKVHGNMPLGETAAKNLLSIDPESSVNYAV 525
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
L N+YA S WE+ R + E K G S I
Sbjct: 526 LANMYAESHLWEDAQRTRKLLVETSKGKEAGFSVI 560
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 189/421 (44%), Gaps = 73/421 (17%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S K + EAL F F+ + R T+ + AC+ R + G ++H
Sbjct: 85 MVSGYAKNSRPQEALDLFAFMLR-SGARPNQFTFGSAVRACTGARCARSGEQIHACAAKG 143
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + + +++M+ +CGS+ DAR +F EM ++++VSW +++ G + N A+ L+
Sbjct: 144 RFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVEREHCNDALGLF 203
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
ML+ G++PD FTFGS ++AC + + +HA +IK
Sbjct: 204 DSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIK-------------------- 243
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVA 286
L W+ +IA S+ID ++K L AR +++ M P+L S +I+G +
Sbjct: 244 ---LGYWDENVAIA--------SLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYS 292
Query: 287 SCSN-ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
N +++AM LF ++ + L D + + SLL C + S+ G QIH+Y+ KK ++
Sbjct: 293 MDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDL 352
Query: 346 PVCNAIL-----------------------------------QHQAGE-LFRLFSLMLAS 369
+ NA++ QH GE LF+ M
Sbjct: 353 ALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEED 412
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGS 428
KP+ +TF ++ AC+ + G + +M K G+ + +D+ + G L
Sbjct: 413 GVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLED 472
Query: 429 A 429
A
Sbjct: 473 A 473
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 205/653 (31%), Positives = 337/653 (51%), Gaps = 80/653 (12%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
AF L D+A ++ S L++ + + L L +Q+ EA+ F +N + +
Sbjct: 319 AFARHGLTDEAKDIFLS-LKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVD--VNA 375
Query: 81 STYADLISACS----SLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDAR 135
TY L+SA + S L++GR VH H+L + + + N ++NMY KCG++E A
Sbjct: 376 DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESAS 435
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+F M + +SW +I+ QNG A+ Y M QS + P F S + +C+GL
Sbjct: 436 KIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLK 495
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+Q+H +K N L+ MY + + D W VF+S+A D
Sbjct: 496 LLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHD--------- 546
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA-NEAMSLFSEMGDRELIPDGLTVR 314
SWNT++ +AS +E + +F+ M LIP+ +T
Sbjct: 547 -------------------EVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFI 587
Query: 315 SLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFS---- 364
+LL A SPLS+ + G Q+H+ ++K G + V NA++ A G LF+
Sbjct: 588 NLLAAL-SPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSD 646
Query: 365 ----------------------------LMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
LM+ S D TF+ ++ ACA++A+LE G +
Sbjct: 647 RRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGME 706
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LH + +++ L DV V + L+DMY KCG + A +LFN M + SW+S+I GYA+ G
Sbjct: 707 LHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGL 766
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G +A+++F M S P+HVT V VL+ACSH GLVE GL+ + +M ++GI+P E S
Sbjct: 767 GRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMP-DHGILPQIEHYS 825
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC---KTHGNVDVGKRAAENILKI 573
CV+DLL RAG++ + +++I +M + + ++W+++L +C K N+D+G+ A+ +L+I
Sbjct: 826 CVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEI 885
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+P N VL N +A++G WE+ A+ +M++ +K G+SW+ + +H
Sbjct: 886 EPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHT 938
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 239/511 (46%), Gaps = 60/511 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ADL+ +H ++ D L NH++N Y K L A VFDEMP
Sbjct: 64 HADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMP 123
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQML---QSGLMPDQFTFGSIIRACS--GLCCV 197
+RN VSWT +++G +G A ++ ML Q+G P FTFG+++RAC G +
Sbjct: 124 ERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRL 183
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMY---TKFDRILDAWNVFSSIARKDITSWGSMI 254
G Q+H V K+E+ S+ NALI+MY T IL A VF +D+ +W +++
Sbjct: 184 GFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPIL-AQRVFDGTPIRDLITWNALM 242
Query: 255 DGFSKL-DFAR--TVFNEME--------SPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
++K D A T+F +M+ P ++ ++I + S ++ +
Sbjct: 243 SVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVL-------- 294
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------------YSNVPVCNAI 351
D + V L C+S LY G + S + G N N +
Sbjct: 295 -----DQVLVWVLKSGCSS--DLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGL 347
Query: 352 L-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA----SLEMGTQLHCYIM 402
+ Q + E ++F + + + T+ ++ A A + L +G +H +++
Sbjct: 348 IVGLVRQDFSEEAVKIF-VGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHML 406
Query: 403 KTGLA-LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+TGL L + V NGL++MY KCG++ SA ++F ME D +SW+++I Q G EEA+
Sbjct: 407 RTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAV 466
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+ MR S + P++ L+ L++C+ + L+ G Q++ ++G+ + +V +
Sbjct: 467 MHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVH-CDAVKWGLDLDTSVSNVLVKM 525
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G + + N MA D+ V W +++
Sbjct: 526 YGECGAMSDYWKVFNSMAEHDE-VSWNTMMG 555
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 143/574 (24%), Positives = 252/574 (43%), Gaps = 60/574 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYAD 85
L A +V D R W L S + EA F + RP+ T+
Sbjct: 112 LAAASQVFDEMPERNAVSWTC-LVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGT 170
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQ--PDAVLHNHILNMYGKC--GSLEDARMVFDEM 141
L+ AC +LG V H L SK + + + N +++MYG C G A+ VFD
Sbjct: 171 LLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGT 230
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-----LMPDQFTFGSIIRACSGLCC 196
P R++++W A+++ ++ G + L+ M Q G L P + TFGS+I A S
Sbjct: 231 PIRDLITWNALMSVYAKKGDVASTFTLFKDM-QRGDSRIQLRPTEHTFGSLITAASLSSG 289
Query: 197 VG-LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ Q+ V+KS S L +AL++ + + +A ++F S+ +K+ + +I
Sbjct: 290 SSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIV 349
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G + DF+ E + + NT+ NA+ + L S + + + +GL +
Sbjct: 350 GLVRQDFSE----EAVKIFVGTRNTVDV------NADTYVVLLSALAEYSISEEGLRIGR 399
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL------------- 362
++ L G+ + G + C AI A ++F+L
Sbjct: 400 VVHGHM----LRTGLTDLKIAVSNGLVNMYAKCGAI--ESASKIFQLMEATDRISWNTII 453
Query: 363 ---------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+SLM S P + + +CA + L G Q+HC +K GL
Sbjct: 454 SALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLD 513
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG-EEALKLFRR 466
LD V N L+ MY +CG++ ++FN M + D VSW++++ A E +K+F
Sbjct: 514 LDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNN 573
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M G+ PN VT + +L A S + ++E G Q++ + ++G++ + ++ A++G
Sbjct: 574 MMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVM-KHGVMEDNVVDNALISCYAKSG 632
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+ E M+ D + W S+++ +GN+
Sbjct: 633 DMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNL 666
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 152/357 (42%), Gaps = 56/357 (15%)
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI----PDGLTV 313
++L A VF+EM N SW +++G A EA +F M RE+ P T
Sbjct: 110 ARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAM-LREVQAGCRPTSFTF 168
Query: 314 RSLLCACT--SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------- 352
+LL AC P L +Q+H + K + SN VCNA++
Sbjct: 169 GTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFD 228
Query: 353 -------------------QHQAGELFRLFSLMLAS----QTKPDHITFND-VMGACAAM 388
+ F LF M Q +P TF + A +
Sbjct: 229 GTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSS 288
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
S + Q+ +++K+G + D++V + L+ + + G A+++F ++ + V+ + LI
Sbjct: 289 GSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLI 348
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
VG + EEA+K+F R++ V N T V +L+A + + EEGL++ R++
Sbjct: 349 VGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLR 407
Query: 509 IPTRERRSCV----VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ + V V++ A+ G + A M D I W +++++ +GN +
Sbjct: 408 TGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRI-SWNTIISALDQNGNCE 463
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
LH ++K GL D+F+ N L++ Y K L +A ++F+ M + + VSW+ L+ GY G
Sbjct: 82 NLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141
Query: 456 CGEEALKLFRRMR---SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
EEA ++FR M +G RP T +L AC G G + +G++
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAV-----QVHGLVSKT 196
Query: 513 ERRSCVV---DLLARAGRVHEAEDFINQMAFDD----DIVVWKSLLASCKTHGNV 560
E S L++ G + Q FD D++ W +L++ G+V
Sbjct: 197 EYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDV 251
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/625 (30%), Positives = 308/625 (49%), Gaps = 112/625 (17%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D N+ILN Y KC L A ++FDEMP R+ VSW MIAG G A+ ++ M
Sbjct: 32 DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
G D++TFGS+++ + LG+Q+H+ +IK + ++ + +AL+ MY K +++
Sbjct: 92 SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF-------------------------N 268
DA+ F SI++ + SW +MI+G+++ T F +
Sbjct: 152 DAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLD 211
Query: 269 EMESPNLASW-----------------NTIIAGVASCSNANEAMSLF-SEMGDRELI--- 307
+ + NL S N +I + C + ++A +F S G R+L+
Sbjct: 212 DADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWN 271
Query: 308 ----------------------------PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
PD + S++ AC + G +H +IK+
Sbjct: 272 SLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKR 331
Query: 340 GFYSNVPVCNAILQ-----------------------------------HQAG---ELFR 361
GF +VP+ NA++ Q G + +
Sbjct: 332 GFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVK 391
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F M ++ DH +F+ V+ +C+ +A+ ++G Q+H +K GL + FV + L+ MY
Sbjct: 392 SFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYS 451
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG + AR F ++W++L+ GYAQ G AL LF M V+ +H+T V
Sbjct: 452 KCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVA 511
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VLTACSH+GLVE+G + R M+++YG+ P E +C VDL R+GR+ EA+ I +M F
Sbjct: 512 VLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFK 571
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D VWK+ L +C++ GN+++ + A ++L+++P VLL N+Y + +W+E A++
Sbjct: 572 PDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVK 631
Query: 602 GSMKERGVRKVPGQSWIEIQTKIHA 626
MKERGV+KVPG SWIE+ +HA
Sbjct: 632 RLMKERGVKKVPGWSWIEVNNNVHA 656
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H +K G DV+ N +++ Y KC L SA LF+ M D VSW+++I G+ G
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E + + R MRS G + T +L + G+ G Q++ I+ + G S
Sbjct: 81 EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII-KMGYAENVYAGSA 139
Query: 518 VVDLLARAGRVHEA 531
++D+ A+ ++ +A
Sbjct: 140 LLDMYAKCEKLEDA 153
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/662 (29%), Positives = 317/662 (47%), Gaps = 130/662 (19%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD + ++ D +W+ + + + N +AL+ + + N N TY ++
Sbjct: 91 LDYSLQIFDRIENSNGFMWN-TMMRAYIQSNSAEKALLLYKLMVKN-NVGPDNYTYPLVV 148
Query: 88 SACSSLRSLQLG-RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR----------- 135
AC+ +R L+ G +++HDH+L D + N ++NMY CG++ DAR
Sbjct: 149 QACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDS 207
Query: 136 --------------------MVFDEMPQRNVV---------------------------- 147
++FD+MPQRN+V
Sbjct: 208 VSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEK 267
Query: 148 ---SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
SW+A+I+G QNG A+ ++++M +G+ D+ S++ AC+ L V G+ +H
Sbjct: 268 DMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIH 327
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
VI+ S++ QNALI MY+ I+DA +
Sbjct: 328 GLVIRMGIESYVNLQNALIHMYSGSGEIMDA----------------------------Q 359
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+FN + + SWN++I+G C + +A +LF M +++++
Sbjct: 360 KLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIV----------------- 402
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-GELFRLFSLMLASQTKPDHITFNDVMG 383
S V + QH E LF M Q +PD V+
Sbjct: 403 ------------------SWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVIS 444
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
AC +A+L+ G +H YI K GL ++V + L+DMY+KCG + +A E+FN ME+ V S
Sbjct: 445 ACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSS 504
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W++LI+G A G E +L +F M+++GV PN +T +GVL AC H+GLV+EG + M
Sbjct: 505 WNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMI 564
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
++GI P + C+VDLL RAG ++EAE I M D+ W +LL +CK HG+ ++G
Sbjct: 565 EKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMG 624
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+R ++++ P + VLL NI+AS G WE+V + G MK++GV K PG S IE
Sbjct: 625 ERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGV 684
Query: 624 IH 625
+H
Sbjct: 685 VH 686
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 160/310 (51%), Gaps = 9/310 (2%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F LD++ +F+ +E+ N WNT++ ++A +A+ L+ M + PD T +
Sbjct: 88 FIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLV 147
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKPD 374
+ AC L + G +IH +++K GF S+V V N ++ A G + R + D
Sbjct: 148 VQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNM-RDARKLFDESPVLD 206
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+++N ++ +E I ++ N ++ + K G + A +LFN
Sbjct: 207 SVSWNSILAGYVKKGDVEEAK----LIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFN 262
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
M++ D+VSWS+LI GY Q G EEAL +F M ++G+R + V +V VL+AC+H+ +V+
Sbjct: 263 EMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKT 322
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G ++ ++ GI ++ ++ + + +G + +A+ N + + D + W S+++ C
Sbjct: 323 GKMIHGLVI-RMGIESYVNLQNALIHMYSGSGEIMDAQKLFNG-SHNLDQISWNSMISGC 380
Query: 555 KTHGNVDVGK 564
G+V+ +
Sbjct: 381 MKCGSVEKAR 390
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/581 (29%), Positives = 305/581 (52%), Gaps = 64/581 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T A +S C++ L G ++H + + + + N +L+MY KC L+DA +F+
Sbjct: 243 ATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFEL 302
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P+ ++V+W MI+GC QNG + A+ L+ ML+SG PD T S++ A + L + G
Sbjct: 303 LPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQG 362
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+++H ++I++ +AL+ +Y K + A N++ + D+ ++I G+
Sbjct: 363 KEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGY--- 419
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
V N M + +A+ +F + ++ + P+ +TV S+L AC
Sbjct: 420 -----VLNGM--------------------SEKALQMFRYLLEQCIKPNAVTVASVLPAC 454
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----------------------- 357
S +L G +IH Y+++ + V +A++ A
Sbjct: 455 ASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWN 514
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E LF M K +++T + + ACA++ ++ G ++H I+K
Sbjct: 515 SMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKG 574
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
+ D+F + L+DMY KCG++ A +F FM D + VSW+S+I Y G +E++
Sbjct: 575 PIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFL 634
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM+ G +P+HVT + +++AC+H GLVEEGLQL++ M EY I P E +C+VDL +R
Sbjct: 635 HRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSR 694
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
+GR+ +A FI M F D +W +LL +C+ H NV++ A++ + K+DP NS VL+
Sbjct: 695 SGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLM 754
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NI A +G+W+ V+++ MK+ + K+PG SW+++ H
Sbjct: 755 SNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSH 795
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 151/568 (26%), Positives = 258/568 (45%), Gaps = 79/568 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++ +C++L ++ LGR VH ++ D + + ++ MY G L DAR FD M
Sbjct: 143 TLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGM 202
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+ V W M+ G + G A+ L+ M SG P+ T + C+ + G
Sbjct: 203 PWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGV 262
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH+ +K + N L++MY K + DAW +F + R D+ +W MI G +
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQ-- 320
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N ++ +EA+ LF +M PD +T+ SLL A T
Sbjct: 321 -----------------NGLL---------DEALGLFCDMLRSGARPDSVTLVSLLPALT 354
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNA------------------------------- 350
L QG ++H YII+ + + + +A
Sbjct: 355 DLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGST 414
Query: 351 -----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L + + ++F +L KP+ +T V+ ACA++++L +G ++H Y+++
Sbjct: 415 VISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNA 474
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+V + LMDMY KCG L + +F+ M D V+W+S+I ++Q G +EAL LFR
Sbjct: 475 YEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFR 534
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE---RRSCVVDLL 522
+M G++ N+VT+ L+AC+ + + G +++ ++ P + S ++D+
Sbjct: 535 QMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKG----PIKADIFAESALIDMY 590
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNS 578
A+ G + A M D + V W S++++ HG +V R E K D
Sbjct: 591 AKCGNMELALRVFEFMP-DKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTF 649
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKE 606
AL+ C A +G EE +L M +
Sbjct: 650 LALISAC---AHAGLVEEGLQLFQCMTK 674
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 230/519 (44%), Gaps = 76/519 (14%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPD---AVLHNHILNMYGKCGSLEDARMVFDEMP 142
L+ C S L LG ++H + S + LH +L MY DA VF +P
Sbjct: 38 LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 143 QR---NVVSWTAMIAGCSQNGQENAAIELYVQMLQ--SGLMPDQFTFGSIIRACSGLCCV 197
+ + + W +I G + G + A+ YV+M + PD T ++++C+ L V
Sbjct: 98 RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LGR +H + S + +ALI MY+ + DA + F + +D W M+DG+
Sbjct: 158 SLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGY 217
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
K + A+ LF M P+ T+ L
Sbjct: 218 IK----------------------------AGDVGGAVRLFRNMRVSGCEPNFATLACFL 249
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSL------- 365
C + L G+Q+HS +K G V V N +L A + +RLF L
Sbjct: 250 SVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLV 309
Query: 366 ------------------------MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
ML S +PD +T ++ A + L+ G ++H YI
Sbjct: 310 TWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYI 369
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ + +D F+++ L+D+Y KC + +AR L++ DVV S++I GY G E+AL
Sbjct: 370 IRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKAL 429
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVD 520
++FR + ++PN VT+ VL AC+ + + G +++ +++N Y E S ++D
Sbjct: 430 QMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMD 487
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ A+ GR+ + ++M+ D+ V W S+++S +G
Sbjct: 488 MYAKCGRLDLSHYIFSKMSLKDE-VTWNSMISSFSQNGE 525
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 213/467 (45%), Gaps = 72/467 (15%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQN-LYNEALVAF-DFLQNNTNFRIR 79
+ C LD A + + R DD+ ++ S C QN L +EAL F D L++ R
Sbjct: 287 YAKCRCLDDAWRLFELLPR--DDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGA--RPD 342
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T L+ A + L L+ G++VH +I+ + DA L + ++++Y KC + AR ++D
Sbjct: 343 SVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYD 402
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+VV + +I+G NG A++++ +L+ + P+ T S++ AC+ + + L
Sbjct: 403 AARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPL 462
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+++H +V+++ + ++AL+ MY K R+ + +FS ++ KD +W SMI FS+
Sbjct: 463 GQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQ 522
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
EA+ LF +M + + +T+ S L A
Sbjct: 523 ----------------------------NGEPQEALDLFRQMCMEGIKYNNVTISSALSA 554
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----EL-FRLFSLM-------- 366
C S ++Y G +IH IIK +++ +A++ A EL R+F M
Sbjct: 555 CASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSW 614
Query: 367 -----------LASQT------------KPDHITFNDVMGACAAMASLEMGTQL-HCYIM 402
L ++ KPDH+TF ++ ACA +E G QL C
Sbjct: 615 NSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTK 674
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ +A + ++D+Y + G L A + M PD W +L+
Sbjct: 675 EYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALL 721
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 180/395 (45%), Gaps = 50/395 (12%)
Query: 16 CEYWDAFELCMLLD---------QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVA 66
C + DAF + L+D A + D+ R D + + S + +AL
Sbjct: 373 CVHMDAFLVSALVDIYFKCRDVRTARNLYDA-ARAIDVVIGSTVISGYVLNGMSEKALQM 431
Query: 67 FDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
F +L I+P+ T A ++ AC+S+ +L LG+++H ++L + + + + +++M
Sbjct: 432 FRYLLEQC---IKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDM 488
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y KCG L+ + +F +M ++ V+W +MI+ SQNG+ A++L+ QM G+ + T
Sbjct: 489 YAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTI 548
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
S + AC+ L + G+++H +IK + + +++ALI MY K + A VF +
Sbjct: 549 SSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPD 608
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
K N SWN+II+ + E++S M +
Sbjct: 609 K----------------------------NEVSWNSIISAYGAHGLVKESVSFLHRMQEE 640
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGEL 359
PD +T +L+ AC + +G+Q+ + K+ Y P C L ++G L
Sbjct: 641 GYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKE--YLIAPRMEHFACMVDLYSRSGRL 698
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ + KPD + ++ AC ++E+
Sbjct: 699 DKAIQFIADMPFKPDAGIWGALLHACRVHRNVELA 733
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 135/308 (43%), Gaps = 39/308 (12%)
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS-----YIIKK 339
V S+A+ ++L +P GL + + + LS + + +H+ Y++ +
Sbjct: 26 VTDVSSADRLLALLRGCVSAPHLPLGLQIHAR-AVVSGALSNHNHLALHTRLLGMYVLAR 84
Query: 340 GFYSNVPVCNAILQHQAGE---------------------LFRLFSLMLASQTKPDHITF 378
F V V +A+ + AG LF + + PD T
Sbjct: 85 RFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTL 144
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ +CAA+ ++ +G +H TGLA DV+V + L+ MY G L AR+ F+ M
Sbjct: 145 PYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPW 204
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D V W+ ++ GY + G A++LFR MR SG PN TL L+ C+ + G+QL
Sbjct: 205 RDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQL 264
Query: 499 YRI-----MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ + ++ E + T L A R+ E + DD+V W +++
Sbjct: 265 HSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFE-------LLPRDDLVTWNGMISG 317
Query: 554 CKTHGNVD 561
C +G +D
Sbjct: 318 CVQNGLLD 325
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 313/629 (49%), Gaps = 80/629 (12%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD I D++ S+ + + EA+ F L T F+ T+ ++ AC +L
Sbjct: 131 FDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD 190
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
GRK+H + Q D + +++MY + G + AR +FD+MP R++ SW AMI+G
Sbjct: 191 ---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISG 247
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
QNG A+++ +M G+ D T SI+ C+ L + +H +VIK
Sbjct: 248 LIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFE 307
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
L NALI MY KF + DA VF + +D+
Sbjct: 308 LFVSNALINMYAKFGNLGDAQKVFQQMFLRDVV--------------------------- 340
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWN+IIA + A F +M L PD LT+ SL +H +
Sbjct: 341 -SWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGF 399
Query: 336 IIKKGF---------------------------YSNVPVCNAI-------------LQHQ 355
I+++G+ ++ +PV + + L +
Sbjct: 400 IMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASE 459
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
A E++R+ + + K + T+ ++ A A + +L+ G ++H +++KT L LDVFV
Sbjct: 460 AIEVYRM--MEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTC 517
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+D+Y KCG L A LF + V W+++I + G GE+ALKLFR M+ GV+P+
Sbjct: 518 LIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPD 577
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
HVT + +L+ACSH GLV+EG + +MQ EYGI P+ + C+VDLL RAG + A DFI
Sbjct: 578 HVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFI 636
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWE 595
M D +W +LL +C+ HGN+++GK A++ + ++D N VLL NIYA+ GKWE
Sbjct: 637 KDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWE 696
Query: 596 EVARLMGSMKERGVRKVPGQSWIEIQTKI 624
V ++ +ERG++K PG S IE+ ++
Sbjct: 697 GVDKVRSLARERGLKKTPGWSSIEVNRRV 725
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/571 (23%), Positives = 253/571 (44%), Gaps = 83/571 (14%)
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
D S S L +++H ++ S + ++N+Y G + +R FD++ ++
Sbjct: 78 DFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRK 137
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQ-MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+V +W +MI+ +NG AI+ + Q +L + D +TF +++AC L GR++
Sbjct: 138 DVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKI 194
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H V K + +LI MY++F + A ++F + +D+ SW
Sbjct: 195 HCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSW------------- 241
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
N +I+G+ NA +A+ + EM + D +TV S+L C
Sbjct: 242 ---------------NAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQL 286
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQT------- 371
+ IH Y+IK G + V NA++ A G+ ++F M
Sbjct: 287 GDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSII 346
Query: 372 ------------------------KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+PD +T + A + +H +IM+ G
Sbjct: 347 AAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWL 406
Query: 408 LDVFVM-NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
++ V+ N +MDMY K G + SA ++FN + DVVSW++LI GY Q G EA++++R
Sbjct: 407 MEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRM 466
Query: 467 MRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLYR--IMQNEYGIIPTRERRSCVVDLLA 523
M ++ N T V +L A +HVG +++G++++ I N + + +C++DL
Sbjct: 467 MEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFV---GTCLIDLYG 523
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSA 579
+ GR+ +A Q+ + V W ++++ HG+ + + + + +K D
Sbjct: 524 KCGRLVDAMCLFYQVPRESS-VPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFI 582
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
+L+ C + SG +E M+E G++
Sbjct: 583 SLLSAC---SHSGLVDEGKWFFHLMQEYGIK 610
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/546 (32%), Positives = 292/546 (53%), Gaps = 53/546 (9%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
+Y L D+ +F+ + ++W ++I + +G + ++ ++ ML SGL PD
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI-------LDAW 236
F S++++C+ L + LG LH ++I+ L + NAL+ MY+K + L A
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF + + T + S+ D R +F M +L SWNTIIAG A E +
Sbjct: 169 EVFDEMTER--TRSVRTVSVLSE-DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
+ EMG L PD T+ S+L + + +G +IH I++G +++ V ++++ A
Sbjct: 226 MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYA 285
Query: 357 G------------------------------------ELFRLFSLMLASQTKPDHITFND 380
E R F ML ++ KP +F+
Sbjct: 286 KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
+M ACA + +L +G QLH YI + G ++F+ + L+DMY KCG++ +A+++F+ M D
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+VSW+++I+G A G +A++LF +M + G++ VLTACSH GLV+E + +
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFN 458
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
M ++GI P E + V DLL RAGR+ EA DFI M +W +LL++C+ H N+
Sbjct: 459 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNI 518
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
D+ ++ A IL++DP N+ A +LL NIY+++ +W+E A+ SM+ G+RK P SWIE+
Sbjct: 519 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 578
Query: 621 QTKIHA 626
+ K++A
Sbjct: 579 KNKVYA 584
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 36 DSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
DS + F+ + + DL S + LY E L + N + T + ++
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREM-GGANLKPDSFTLSSVLPL 248
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
+ + G+++H + D + + +++MY KC + D+ VF + +R+ +SW
Sbjct: 249 IAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISW 308
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
++IAGC QNG + + + QML + + P ++F SI+ AC+ L + LG+QLH ++ +
Sbjct: 309 NSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 368
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG---FSKLDFARTV 266
+ ++ ++L+ MY K I A +F + +D+ SW +MI G + A +
Sbjct: 369 NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIEL 428
Query: 267 FNEMESPNLASWNTIIAGVASCSNA---NEAMSLFSEM 301
F +ME+ I A + +CS+ +EA F+ M
Sbjct: 429 FEQMETEG------IKAVLTACSHGGLVDEAWKYFNSM 460
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 296/577 (51%), Gaps = 65/577 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
++ ++ ACS LR GRK+H I+ PD+ + +++MY KC +ED+R VFDE+
Sbjct: 140 VFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEI 198
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
RNVV WT+MI G QN + L+ +M + + +Q+T GS++ AC+ L + G+
Sbjct: 199 LDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGK 258
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H +VIKS + L+ +Y K I DA+
Sbjct: 259 WVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAF------------------------- 293
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+VF+E+ + +L SW +I G A EA+ LF++ ++L+P+ +T S+L AC
Sbjct: 294 ---SVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACA 350
Query: 322 SPLSLYQGMQIH------------------------------SYIIKKGFYSNVPVCNAI 351
SL G +H Y+ + F +V N+I
Sbjct: 351 QTGSLNMGRSVHCLGIKLGSEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSI 410
Query: 352 L-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ A E LF M + PD IT V+ ACA++ + +G+ LH Y +K GL
Sbjct: 411 ISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGL 470
Query: 407 -ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ V+V L++ Y KCG SAR +F+ M + + ++WS++I GY G +L+LF
Sbjct: 471 LSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFG 530
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M + PN V +L+ACSH G++ EG + + M Y +P+ + +C+VDLLARA
Sbjct: 531 DMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARA 590
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
GR+ EA DFI ++ D+ + + L C+ H D+G+ A +L++ P + VL+
Sbjct: 591 GRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMS 650
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
N+YAS G+W + ++M MK+RG+ K+PG S ++I+T
Sbjct: 651 NLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIET 687
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 248/558 (44%), Gaps = 74/558 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+ C ++ SL RK+H ++ D + ++++YG G +E AR++FD + +
Sbjct: 45 LLGICKTVSSL---RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPD 101
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLGRQLH 204
+ SW MI N + ++ Y L+ L D F +++ACS L GR+LH
Sbjct: 102 LYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLH 161
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
++K + L+ MY K + D+ VF I +++ W SMI G+ + D +
Sbjct: 162 CQIVKVGSPDSFV-LTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLK 220
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
E + LF+ M + + + T+ SL+ ACT
Sbjct: 221 ----------------------------EGLVLFNRMREGLVEGNQYTLGSLVTACTKLG 252
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLM-------LASQTK--- 372
+L+QG +H Y+IK GF N + +L + G++ FS+ L S T
Sbjct: 253 ALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIV 312
Query: 373 ------------------------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
P+ +T + V+ ACA SL MG +HC +K G +
Sbjct: 313 GYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SE 371
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D N L+DMY KC +G AR +F + D DV++W+S+I GY Q G EAL+LF +MR
Sbjct: 372 DATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMR 431
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
S V P+ +TLV VL+AC+ VG G L+ + + + +++ A+ G
Sbjct: 432 SDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDA 491
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL--KIDPTNSAALVLLCN 586
A ++M + + + W +++ G+ ++L K++P N + +
Sbjct: 492 ESARVIFDEMG-EKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEP-NEVIFTTILS 549
Query: 587 IYASSGKWEEVARLMGSM 604
+ SG E R +M
Sbjct: 550 ACSHSGMLGEGWRYFNTM 567
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 221/488 (45%), Gaps = 60/488 (12%)
Query: 20 DAFELCMLLD---QAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFL 70
D+F L L+D + EV DS R FD+I D + + + + E LV F+ +
Sbjct: 171 DSFVLTGLVDMYAKCREVEDS-RRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRM 229
Query: 71 QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS 130
+ T L++AC+ L +L G+ VH +++ S ++ L +L++Y KCG
Sbjct: 230 REGL-VEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGD 288
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
+ DA VFDE+ ++VSWTAMI G +Q G A++L+ L+P+ T S++ A
Sbjct: 289 IRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSA 348
Query: 191 CSGLCCVGLGRQLHAHVIK--SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
C+ + +GR +H IK SE + +NAL+ MY K I DA VF ++ KD+
Sbjct: 349 CAQTGSLNMGRSVHCLGIKLGSEDATF---ENALVDMYAKCHMIGDARYVFETVFDKDVI 405
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+W S+I G+++ +A EA+ LF +M + P
Sbjct: 406 AWNSIISGYTQNGYAY----------------------------EALELFDQMRSDSVYP 437
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQA----GELFRLF 363
D +T+ S+L AC S + G +H Y IK G S +V V A+L A E R
Sbjct: 438 DAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESAR-- 495
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
++ + + IT++ ++G +L ++K L + + ++
Sbjct: 496 -VIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHS 554
Query: 424 GSLGSARELFNFMED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
G LG FN M P + ++ ++ A+ G EEAL ++ ++P+
Sbjct: 555 GMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKI---PIQPDVSL 611
Query: 479 LVGVLTAC 486
L L C
Sbjct: 612 LGAFLHGC 619
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 273/529 (51%), Gaps = 64/529 (12%)
Query: 99 GRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCS 157
GR IL + P V N ++ Y + G +++A+ +FD MP RN +SW MIAG +
Sbjct: 335 GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLI 217
QNG+ A++L + ++G++P + S ACS + + GRQ+H+ +K+ +
Sbjct: 395 QNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSY 454
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS 277
NALI+MY K +++ R VFN M + S
Sbjct: 455 VCNALISMYGKC----------------------------RNMEYVRQVFNRMRVKDTVS 486
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
WN+ IA + + +A +F M R+++ + T+ +S Y +
Sbjct: 487 WNSFIAALVQNNMLEDARHIFDNMLSRDVV-----------SWTTIISAYAQAE------ 529
Query: 338 KKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+ E F ML KP+ ++ C + S ++G Q+
Sbjct: 530 -----------------RGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQI 572
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H +K G+ ++ V N LM MY KCG S ++F+ ME+ D+ +W++ I G AQ G G
Sbjct: 573 HTVAIKHGMDSELIVANALMSMYFKCGCADS-HKVFDSMEERDIFTWNTFITGCAQHGLG 631
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
EA+K++ M S GV PN VT VG+L ACSH GLV+EG Q ++ M +YG+ P E +C
Sbjct: 632 REAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYAC 691
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+VDLL R G V AE FI M + D V+W +LL +CK H N ++G+RAAE + +P+N
Sbjct: 692 MVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSN 751
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ V+L NIY+S G W EVA L MK+RGV K PG SW++I+ K+H+
Sbjct: 752 AGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHS 800
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 154/652 (23%), Positives = 270/652 (41%), Gaps = 99/652 (15%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQ--NNTNFRIRPSTYAD 85
L +A EV D+ R W+ + S+ C + +A + FD + N I S YA
Sbjct: 49 LREAREVFDAMPHRDIIAWN-SMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYAR 107
Query: 86 LISACSSLR------------------------SLQLGRKVHDHILSSKCQPDAVLHNHI 121
L + R + + R++ D + S D N +
Sbjct: 108 LGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR----DVTSWNSM 163
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
+ Y + DA +F +MPQRN+V+WT MI+G + Q +++ M G PDQ
Sbjct: 164 VTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQ 223
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD-AWNVFS 240
F S++ A +GL +G+ L V+K+ S ++ +++ +YT+ LD A F
Sbjct: 224 SNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFD 283
Query: 241 SIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+ ++ +W +MI S ++D A V+ ++ S ++ G+A C EA L
Sbjct: 284 GMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARIL 343
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI------ 351
F E IPD + V + + ++ Y MQ K + +P N I
Sbjct: 344 F------EQIPDPIVV-----SWNAMITGY--MQNGMVDEAKELFDRMPFRNTISWAGMI 390
Query: 352 ----LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
++ E L + + P + AC+ + +LE G Q+H +K G
Sbjct: 391 AGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQ 450
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFM---------------------EDP------- 439
+ +V N L+ MY KC ++ R++FN M ED
Sbjct: 451 FNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM 510
Query: 440 ---DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
DVVSW+++I YAQ G+EA++ F+ M +PN L +L+ C +G + G
Sbjct: 511 LSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQ 570
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
Q++ + ++G+ + ++ + + G ++ + M + DI W + + C
Sbjct: 571 QIHTVAI-KHGMDSELIVANALMSMYFKCG-CADSHKVFDSME-ERDIFTWNTFITGCAQ 627
Query: 557 HGNVDVGKRAAENILKIDPT----NSAALVLLCNIYASSGKWEEVARLMGSM 604
HG +G+ A + ++ N V L N + +G +E + SM
Sbjct: 628 HG---LGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSM 676
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/526 (23%), Positives = 227/526 (43%), Gaps = 51/526 (9%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI-AGCSQNGQENAAIELYVQM 172
D H+ + + G L +AR VFD MP R++++W +MI A C+ E+A I
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARI------ 85
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVG-LGRQLHA-HVIKSEHGSHLISQNALIAMYTKFD 230
+ D + G++ A L LGR L A V + ++ NA+++ Y +
Sbjct: 86 -----LFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNG 140
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVAS 287
I A +F ++ +D+TSW SM+ G+ ++ A +F +M NL +W +I+G
Sbjct: 141 DITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVR 200
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+ +F M PD S+L A T L + ++K GF S+V +
Sbjct: 201 IEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVI 260
Query: 348 CNAILQHQAGELFRL-----------------FSLMLASQTKPDHITFNDVMGACAAMAS 390
+IL + L +S M+A+ + I + + S
Sbjct: 261 GTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKS 320
Query: 391 LEMGTQLHCYIMKTGLALDVFVM------------NGLMDMYVKCGSLGSARELFNFMED 438
+ T L + + G + ++ N ++ Y++ G + A+ELF+ M
Sbjct: 321 IPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPF 380
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
+ +SW+ +I GYAQ G EEAL L + + +G+ P+ +L ACSH+G +E G Q+
Sbjct: 381 RNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQV 440
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + + G + ++ + + + N+M D V W S +A+ +
Sbjct: 441 HSLAV-KAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRV-KDTVSWNSFIAALVQNN 498
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
++ + +N+L D + ++ + YA + + +E +M
Sbjct: 499 MLEDARHIFDNMLSRDVVSWTTII---SAYAQAERGDEAVEFFKTM 541
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
ALD + + + G L ARE+F+ M D+++W+S+I Y G E+A LF
Sbjct: 30 ALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDA 89
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
+ VR T +L+ + +G V + +++ M E + SC V + G
Sbjct: 90 ISGGNVR----TATILLSGYARLGRVLDARRVFDGMP-ERNTVAWNAMVSCYV----QNG 140
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLAS-CKTHGNVDVGKRAAENILKIDP 575
+ A + M D+ W S++ C + VD A N+ K P
Sbjct: 141 DITMARRLFDAMP-SRDVTSWNSMVTGYCHSRQMVD-----AWNLFKQMP 184
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 301/577 (52%), Gaps = 69/577 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
++ ++ ACS R+ GRKVH I+ PD+ + +++MY KCG +E +R VFDE
Sbjct: 105 VFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDEN 163
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
RNV SW++MIAG QN + L+ +M + + +Q T G ++ AC L + G+
Sbjct: 164 LDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGK 223
Query: 202 QLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
LH ++IK E GS+L++ AL+ +Y K + DA
Sbjct: 224 WLHGYLIKCGIELGSYLVT--ALLDLYAKCGVVRDA------------------------ 257
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
R+VF+E+ ++ SW +I G EA+ LF + ++P+ +T+ S+ +
Sbjct: 258 ----RSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSS 313
Query: 320 CTSPLSLYQGMQIHSYIIKKG------------FYS------------------NVPVCN 349
C+ L+L G IH IK G FY+ +V N
Sbjct: 314 CSQLLNLNLGRSIHGLSIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWN 373
Query: 350 AILQH-----QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+I+ A E LF M PD +T V+ ACA++ +L++G+ H Y +K
Sbjct: 374 SIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKR 433
Query: 405 GL-ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
GL + +V+V L+ Y KCG SAR +F+ M+ V+WS++I GY G G +L +
Sbjct: 434 GLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSI 493
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M + ++PN +L+ACSH G++ EG +L+ ++ +Y ++P+ + +C+VDLLA
Sbjct: 494 FGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLA 553
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAGR+ EA DFI +M D+ ++ + L C H D+G+ A + +L++ P ++ VL
Sbjct: 554 RAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVL 613
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+CN+YAS +W +V ++ MK+RG+ K PG S +E+
Sbjct: 614 MCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEM 650
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 216/486 (44%), Gaps = 75/486 (15%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ + V D L R W + + + NL + LV F+ ++
Sbjct: 145 DMYAKCGEIECSRSVFDENLDRNVFSWS-SMIAGYVQNNLAQDGLVLFNRMREEL-IEAN 202
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T L+ AC L +L G+ +H +++ + + L +L++Y KCG + DAR VFD
Sbjct: 203 QITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFD 262
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E+ ++VSWTAMI G +QNG A++L++Q Q ++P+ T S+ +CS L + L
Sbjct: 263 ELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNL 322
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR +H IK +++ N+L+ Y K DA VF +I+ +D+ +W S+I FS+
Sbjct: 323 GRSIHGLSIKLGSRDPIVT-NSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQ 381
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+A EA+ LF +M ++PD +T+ S+L A
Sbjct: 382 ----------------------------NGSAYEALELFHQMRMGSVLPDAVTLVSVLSA 413
Query: 320 CTSPLSLYQGMQIHSYIIKKGFY-SNVPVCNAILQHQA---------------------- 356
C S +L G H+Y +K+G SNV V A+L A
Sbjct: 414 CASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVT 473
Query: 357 ---------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
G L +F ML ++ KP+ F ++ AC+ + G +L I
Sbjct: 474 WSAMISGYGIQGNGRGSL-SIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMI 532
Query: 402 MKT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG---YAQFGC 456
+ L ++D+ + G L A + M PDV + + + G +++F
Sbjct: 533 CQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDL 592
Query: 457 GEEALK 462
GE A+K
Sbjct: 593 GELAIK 598
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 160/349 (45%), Gaps = 42/349 (12%)
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
T S+ F +LD AR VF+ + P+ SW II S + + ++ M
Sbjct: 41 TKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKE 100
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG--------------------------F 341
D + +L AC+ + +G ++H I+K G F
Sbjct: 101 CDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDSFVFTGLVDMYAKCGEIECSRSVF 160
Query: 342 YSNVP---------VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
N+ + + + A + LF+ M + + IT ++ AC + +L
Sbjct: 161 DENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALH 220
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G LH Y++K G+ L +++ L+D+Y KCG + AR +F+ + D+VSW+++IVGY
Sbjct: 221 QGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYT 280
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
Q GC EEALKLF + V PN VT+ V ++CS + L L R + + +R
Sbjct: 281 QNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQL----LNLNLGRSIHGLSIKLGSR 336
Query: 513 ER--RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ + +VD A+ +A ++ + D D+V W S++++ +G+
Sbjct: 337 DPIVTNSLVDFYAKCQMNRDAR-YVFETISDRDVVAWNSIISAFSQNGS 384
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 18/279 (6%)
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ-------IHSYIIKKG 340
C N N M + + L+ GLT R L C+ T +SLY + I
Sbjct: 15 CDNINTLMEMHAY-----LVVQGLT-RDLSCS-TKLVSLYGSFGRLDLARLVFDTIPHPD 67
Query: 341 FYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
F S V + L + ++ ++ M + D++ F+ V+ AC+ + + G ++HC
Sbjct: 68 FLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHC 127
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
I+K G D FV GL+DMY KCG + +R +F+ D +V SWSS+I GY Q ++
Sbjct: 128 QIVKFGNP-DSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQD 186
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
L LF RMR + N +TL ++ AC +G + +G L+ + + GI + ++
Sbjct: 187 GLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLI-KCGIELGSYLVTALL 245
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
DL A+ G V +A +++ DIV W +++ +G
Sbjct: 246 DLYAKCGVVRDARSVFDEL-HGIDIVSWTAMIVGYTQNG 283
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H Y++ GL D+ L+ +Y G L AR +F+ + PD +SW +I Y
Sbjct: 23 EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRER 514
+ + + RMR ++V VL ACS +EG +++ +I++ +G P
Sbjct: 83 EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVK--FG-NPDSFV 139
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG----KRAAENI 570
+ +VD+ A+ G + + ++ D ++ W S++A + G R E +
Sbjct: 140 FTGLVDMYAKCGEIECSRSVFDE-NLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREEL 198
Query: 571 LKIDPTNSAALVLLCNIYAS--SGKW 594
++ + LV C + GKW
Sbjct: 199 IEANQITLGILVHACKKLGALHQGKW 224
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/619 (30%), Positives = 301/619 (48%), Gaps = 71/619 (11%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYAD--LISACSSLRSLQLGRKV 102
+W+ + K + E+L F + I P +A L+ + L + G
Sbjct: 384 VWNL-IMGGYAKVGEFEESLSLFVQMHE---LGIAPDEHAISCLLKCITCLSCARDGLVA 439
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H +I+ + N +++ Y K + DA +VF+ MP+++ +SW ++I+GCS NG
Sbjct: 440 HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLN 499
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
+ AIEL+++M G D T S++ AC+ GR +H + +K+ NAL
Sbjct: 500 SEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANAL 559
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
+ MY+ + + W S +F M N+ SW +I
Sbjct: 560 LDMYS------------------NCSDWQS----------TNQIFRSMGQKNVVSWTAMI 591
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
++ L EM + PD V S L A SL QG +H Y I+ G
Sbjct: 592 TSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGME 651
Query: 343 SNVPVCNAILQ------------------------------------HQAGELFRLFSLM 366
+PV NA+++ + E F LFS M
Sbjct: 652 KLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM 711
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
L Q +P+ +T ++ A A+++SLE G ++H Y ++ G D + N L+DMYVKCG+L
Sbjct: 712 LL-QFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGAL 770
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
AR LF+ + +++SW+ +I GY G G+ A+ LF +MR SG+ P+ + +L AC
Sbjct: 771 LVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYAC 830
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
H GL EG + ++ MQ EY I P + +C+VDLL+R G + EA +FI M + D +
Sbjct: 831 CHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSI 890
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W SLL C+ H NV + ++ A+ + K++P N+ VLL NIYA + +WE V +L +
Sbjct: 891 WVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGG 950
Query: 607 RGVRKVPGQSWIEIQTKIH 625
RG+R+ G SWIE+++K+H
Sbjct: 951 RGLRENTGYSWIEVRSKVH 969
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 246/575 (42%), Gaps = 69/575 (12%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDI--WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRI 78
A+ C L +A V D + D+ W L S+ K + EA+ F +Q +
Sbjct: 145 AYLKCGDLGEARTVFDGMPPQAADVRVWT-SLMSAYAKAGDFQEAVSLFRQMQCCG---V 200
Query: 79 RPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P +A ++ SSL SL G +H + + N ++ +Y +CG +EDA
Sbjct: 201 SPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAAR 260
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD M R+ +SW +MI GC NG A++L+ +M G T S++ AC+GL
Sbjct: 261 VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+G+ +H + +KS L S + I D L + VF + D+ S
Sbjct: 321 GLIGKAVHGYSVKSGLLWGLDSVQSGID-----DAALGSKLVFMYVKCGDMAS------- 368
Query: 257 FSKLDFARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
AR VF+ M S N+ WN I+ G A E++SLF +M + + PD +
Sbjct: 369 ------ARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------- 356
LL T G+ H YI+K GF + VCNA++ A
Sbjct: 423 LLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQD 482
Query: 357 -----------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
E LF M + D +T V+ ACA G +H
Sbjct: 483 TISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHG 542
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
Y +KTGL + + N L+DMY C S ++F M +VVSW+++I Y + G ++
Sbjct: 543 YSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDK 602
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSC 517
L + M G+RP+ + L A + +++G + Y I ++P +
Sbjct: 603 VAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPV---ANA 659
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
++++ + V EA +++ + D++ W +L+
Sbjct: 660 LMEMYVKCRNVEEARLIFDRVT-NKDVISWNTLIG 693
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 141/555 (25%), Positives = 219/555 (39%), Gaps = 97/555 (17%)
Query: 66 AFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD----AVLHNHI 121
A L ++ +R +Y ++ C RSL+ ++ H I +S +VL +
Sbjct: 85 ALRLLGSDGGVDVR--SYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRL 142
Query: 122 LNMYGKCGSLEDARMVFDEMPQR--NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+ Y KCG L +AR VFD MP + +V WT++++ ++ G A+ L+ QM G+ P
Sbjct: 143 VLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSP 202
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D +++ S L + G +H + K G NALIA+Y++ R+ DA VF
Sbjct: 203 DAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVF 262
Query: 240 SSIARKDITSWGSMIDG-FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
S+ +D SW SMI G FS W+ A+ LF
Sbjct: 263 DSMHPRDAISWNSMIGGCFSN-----------------GWH------------GTAVDLF 293
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY---------------- 342
S+M + +TV S+L AC G +H Y +K G
Sbjct: 294 SKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALG 353
Query: 343 --------------------------SNVPVCNAILQHQAG-----ELFRLFSLMLASQT 371
NV V N I+ A E LF M
Sbjct: 354 SKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGI 413
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
PD + ++ ++ G H YI+K G V N L+ Y K +G A
Sbjct: 414 APDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVL 473
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH--- 488
+FN M D +SW+S+I G + G EA++LF RM + G + VTL+ VL AC+
Sbjct: 474 VFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRY 533
Query: 489 --VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
G V G + + G+I + ++D+ + M ++V
Sbjct: 534 WFAGRVVHGYSV------KTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMG-QKNVVS 586
Query: 547 WKSLLASCKTHGNVD 561
W +++ S G D
Sbjct: 587 WTAMITSYMRAGLFD 601
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTY 83
C +++A + D + W+ L + N NE+ F D L FR T
Sbjct: 667 CRNVEEARLIFDRVTNKDVISWN-TLIGGYSRNNFPNESFSLFSDML---LQFRPNAVTM 722
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
++ A +S+ SL+ GR++H + L D+ N +++MY KCG+L AR++FD + +
Sbjct: 723 TCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTK 782
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVG 198
+N++SWT MIAG +G AI L+ QM SG+ PD +F +I+ AC SGL G
Sbjct: 783 KNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEG 839
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 9/210 (4%)
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD----V 410
QAG+L L L S D ++ V+ C SLE + H I + A
Sbjct: 78 QAGDLAGALRL-LGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGS 136
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFM--EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ L+ Y+KCG LG AR +F+ M + DV W+SL+ YA+ G +EA+ LFR+M+
Sbjct: 137 VLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQ 196
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
GV P+ + VL S +G + EG ++ +++ + G+ + ++ + +R GR+
Sbjct: 197 CCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLE-KLGLGQACAVANALIAVYSRCGRM 255
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+A + M D + W S++ C ++G
Sbjct: 256 EDAARVFDSM-HPRDAISWNSMIGGCFSNG 284
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/537 (34%), Positives = 290/537 (54%), Gaps = 58/537 (10%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++M+ + G L A+ VFD + +R V WT +I Q G + +EL++ ML G PD
Sbjct: 186 LIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPD 245
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
++ S+I AC+ L V LG+QLH+ ++ S L+ MY K
Sbjct: 246 GYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKL----------- 294
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG-VASCSNANEAMSLFS 299
+ R ++ AR VF M N+ SW +I+G V S N M+LF
Sbjct: 295 KMERS--------------MEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFR 340
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------ 353
EM + + P+ +T +LL AC + G QIH++++K V NA++
Sbjct: 341 EMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESG 400
Query: 354 --HQAGELF-RLFSLMLASQTKPD----------------------HITFNDVMGACAAM 388
+A + F +L+ + S + PD TF ++ A A++
Sbjct: 401 CMEEARKAFDQLYETNILSMS-PDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASV 459
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
L G +LH MK G D + N L+ MY +CG L A F+ M+D +V+SW+S+I
Sbjct: 460 GLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSII 519
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
G A+ G ++AL +F M +GV+PN VT + VL+ACSHVGLV+EG + +R MQ ++G+
Sbjct: 520 SGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGL 579
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
+P E +C+VDLLAR+G V EA FIN+M D +VWK+LL++C+T+GN ++G+ AA
Sbjct: 580 LPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAAN 639
Query: 569 NILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++ ++P + A VLL N+YA +G W+EVAR+ M+++ + K G SW+++ IH
Sbjct: 640 HVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIH 696
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 243/520 (46%), Gaps = 82/520 (15%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEM- 141
A L+++ + L+LGR +H +L S+ DAV+ N +L MY KCG++E AR VFD+M
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL-G 200
R++VSWTAM + ++NG E ++ L +ML+ GL P+ FT + RAC L G
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163
Query: 201 RQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
+ V+K+ G+ + ALI M+ + ++ A VF + + W +I +
Sbjct: 164 GVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRY-- 221
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ AG AS + + LF M D PDG ++ S++ A
Sbjct: 222 ---------------------VQAGCAS-----KVVELFLHMLDDGFEPDGYSMSSMISA 255
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPV-CNAI-----------LQH------------- 354
CT S+ G Q+HS ++ G S+ V C + ++H
Sbjct: 256 CTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNV 315
Query: 355 ---------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q + LF ML +P+HIT+++++ ACA ++ + G Q+H
Sbjct: 316 MSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHA 375
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI-VGYAQFGCGE 458
+++KT +A V N L+ MY + G + AR+ F+ + + +++S S + C
Sbjct: 376 HVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSS 435
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+ + GV + T +L+A + VGL+ +G +L+ + + G + + +
Sbjct: 436 KIEGM-----DDGV--STFTFASLLSAAASVGLLTKGQKLH-ALSMKAGFRSDQGISNSL 487
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
V + AR G + +A ++M D +++ W S+++ HG
Sbjct: 488 VSMYARCGYLEDACRAFDEMK-DHNVISWTSIISGLAKHG 526
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 157/326 (48%), Gaps = 41/326 (12%)
Query: 75 NFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N IRP+ TY++L+ AC++L GR++H H+L + V+ N +++MY + G +E
Sbjct: 344 NESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCME 403
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+AR FD++ + N++S + + + + NA+ ++ + G+ FTF S++ A +
Sbjct: 404 EARKAFDQLYETNILSMSPDV----ETERNNASCSSKIEGMDDGV--STFTFASLLSAAA 457
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ + G++LHA +K+ S N+L++MY + + DA F
Sbjct: 458 SVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAF------------- 504
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+EM+ N+ SW +II+G+A A +A+S+F +M + P+ +T
Sbjct: 505 ---------------DEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVT 549
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKK--GFYSNVP--VCNAILQHQAGELFRLFSLMLA 368
++L AC S + L + + H ++K G + C L ++G + +
Sbjct: 550 YIAVLSAC-SHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINE 608
Query: 369 SQTKPDHITFNDVMGACAAMASLEMG 394
K D + + ++ AC + E+G
Sbjct: 609 MPCKADALVWKTLLSACRTYGNTEIG 634
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 303/610 (49%), Gaps = 70/610 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + EAL + ++ + T+ AC+ LR + GR VH L++
Sbjct: 83 LLRSYTGLGCHREALAVYSAMRAFDHL-----TFPFAAKACAGLRLGRHGRAVHCRALAA 137
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
D + N +++MY CG + A VF M R VVSW A+IAGC +NG A+E++
Sbjct: 138 GFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVF 197
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M G+ D+ T S++ AC+ + GR +H V G ++ +NALI MY K
Sbjct: 198 GEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKC 257
Query: 230 DRILDAWNVFSSIAR-KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ DA VF KD+ SW +MI + V N+
Sbjct: 258 RSLEDARRVFDHCKHDKDVVSWTAMIGAY--------VLND------------------- 290
Query: 289 SNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
A EA+SL +M P+G+T+ LL AC S S H+ I+ G S++ V
Sbjct: 291 -RAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAV 349
Query: 348 CNAILQHQA-----------------------------------GELFRLFSLMLASQTK 372
A++ A + LF M+A +
Sbjct: 350 ETALIDAYARCGKMKLMRLTLERGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVR 409
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD T ++ A A A L+ G +HC+++ G + GL+D+Y K G L +A L
Sbjct: 410 PDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWAL 469
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F ++ + DVV+W+++I GY+ G A+ L+ RM SG +PN VT+ +L ACSH G++
Sbjct: 470 FQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMI 529
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+EG+++++ M+N +G++P E SC+VD+L RAGR+ EA I M F+ VW +LL
Sbjct: 530 DEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLG 589
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
+C H NV+ G+ AA+ + ++DP N+ + VLL NIYA++ +W +V + M ERG+ K
Sbjct: 590 ACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKE 649
Query: 613 PGQSWIEIQT 622
PG S +E ++
Sbjct: 650 PGSSLVEARS 659
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 207/509 (40%), Gaps = 84/509 (16%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWT-AMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+Y CG A + +MPQ VS++ +++ + G A+ +Y M D
Sbjct: 54 VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF----DHL 109
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TF +AC+GL GR +H + + G QNALI+MY + A VF ++
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAM 169
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+ + SW N +IAG A A+ +F EM
Sbjct: 170 RNRTVVSW----------------------------NAVIAGCVKNGYAERALEVFGEMA 201
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA------------ 350
+ D TV S+L AC L G +H + KG V V NA
Sbjct: 202 ADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLE 261
Query: 351 -------------------------ILQHQAGELFRLFSLMLASQTK-PDHITFNDVMGA 384
+L +A E L ML S P+ +T ++ A
Sbjct: 262 DARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSA 321
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR---ELFNFMEDPDV 441
CA+M S + H ++ GL D+ V L+D Y +CG + R E ++ +
Sbjct: 322 CASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE--- 378
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+W++ + GY G ++A++LF+RM + VRP+ T+ +L A + ++EG ++
Sbjct: 379 -TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCF 437
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ G + + E + ++D+ ++AG + A + + D+V W +++A HG+
Sbjct: 438 LLT-LGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLP-EKDVVAWTTIIAGYSIHGHAR 495
Query: 562 VG----KRAAENILKIDPTNSAALVLLCN 586
R E+ K + A L+ C+
Sbjct: 496 TAILLYDRMVESGGKPNTVTIATLLYACS 524
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS-SLIVGYAQFGCGEEALK 462
+G L ++ L +Y CG SA L M P VS+S SL+ Y GC EAL
Sbjct: 39 SGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALA 98
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDL 521
++ MR+ +H+T AC+ + L G ++ R + +G ++ ++ +
Sbjct: 99 VYSAMRAF----DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFG--GDTYVQNALISM 152
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD-----VGKRAAENILKIDPT 576
G V AE M + +V W +++A C +G + G+ AA+ + ID
Sbjct: 153 YMSCGDVGAAEAVFGAMR-NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGV-GIDRA 210
Query: 577 NSAALVLLC 585
+++ C
Sbjct: 211 TVVSVLPAC 219
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 183/613 (29%), Positives = 323/613 (52%), Gaps = 70/613 (11%)
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP T ++ AC L S + G H I + + + + N ++ MY +CGSLE+A M
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211
Query: 137 VFDEMPQR---NVVSWTAMIAGCSQNGQENAAIELYVQML------QSGLMPDQFTFGSI 187
+FDE+ QR +V+SW ++++ ++ A++L+ +M + D + +I
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+ AC L V +++H + I++ + NALI Y K + +A VF+ + KD+
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331
Query: 248 TSWGSMIDGFSK---LDFARTVFNEMESPNLA----SWNTIIAGVASCSNANEAMSLFSE 300
SW +M+ G+S+ + A +F M N+ +W +IAG + ++EA++LF +
Sbjct: 332 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 391
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK----------GFYSNVPVCNA 350
M +P+ +T+ S+L AC S + QG +IH+Y +K G ++ V NA
Sbjct: 392 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 451
Query: 351 ILQH--------------------------------------QAGELFRLFSLMLASQ-- 370
++ + + +LF M++
Sbjct: 452 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 511
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL--ALDVFVMNGLMDMYVKCGSLGS 428
P+ T + ++ ACA +A++ +G Q+H Y+++ + FV N L+DMY KCG + +
Sbjct: 512 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDT 571
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
AR +F+ M +SW+S++ GY G G EAL +F +MR +G P+ +T + VL ACSH
Sbjct: 572 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 631
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
G+V++GL + M +YG+ P E +C +DLLAR+GR+ +A + M + VVW
Sbjct: 632 CGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWV 691
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL++C+ H NV++ + A +++++ N + L+ NIYA++G+W++VAR+ MK+ G
Sbjct: 692 ALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG 751
Query: 609 VRKVPGQSWIEIQ 621
++K PG SW++ Q
Sbjct: 752 IKKRPGCSWVQGQ 764
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 145/620 (23%), Positives = 254/620 (40%), Gaps = 153/620 (24%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSS-----------------KCQP---DAVL 117
+ PS +A L+ C S ++ ++H I++S +P L
Sbjct: 35 VYPSHFASLLKECKSANTVH---QIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSL 91
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
++ Y CG+ + A +V + + V W +I + G+ ++AI + +ML++G
Sbjct: 92 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 151
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
PD FT +++AC L G H + + S++ NAL+AMY++ + +A
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+F I ++ I ++ SWN+I++ SNA A+ L
Sbjct: 212 IFDEITQRGID-------------------------DVISWNSIVSAHVKSSNAWTALDL 246
Query: 298 FSEM---------GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
FS+M +R D +++ ++L AC S ++ Q ++H I+ G + +V V
Sbjct: 247 FSKMTLIVHEKPTNERS---DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVG 303
Query: 349 NAILQ---------------------------------HQAGEL---FRLFSLMLASQTK 372
NA++ Q+G F LF M
Sbjct: 304 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIP 363
Query: 373 PDHITFNDVMGA--------------------------------CAAMASL---EMGTQL 397
D +T+ V+ +A ASL GT++
Sbjct: 364 LDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEI 423
Query: 398 HCYIMKT----------GLALDVFVMNGLMDMYVKCGSLGSARELFN--FMEDPDVVSWS 445
H Y +K G D+ V N L+DMY KC S +AR +F+ +E+ +VV+W+
Sbjct: 424 HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWT 483
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSS--GVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IM 502
+I G+AQ+G +ALKLF M S GV PN T+ +L AC+H+ + G Q++ ++
Sbjct: 484 VMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 543
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
++ +C++D+ ++ G V A + M+ + W S++ HG
Sbjct: 544 RHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHG---- 598
Query: 563 GKRAAENILKIDPTNSAALV 582
R +E + D A V
Sbjct: 599 --RGSEALDIFDKMRKAGFV 616
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
G++ Y+ CG+ A + + V W+ LI + + G + A+ + RM +G R
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV------VDLLARAGR 527
P+H TL VL AC L YR +G+I S V V + +R G
Sbjct: 153 PDHFTLPHVLKACGE-------LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 205
Query: 528 VHEAE---DFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAA 580
+ EA D I Q DD++ W S++++ N +D+ + I+ PTN +
Sbjct: 206 LEEASMIFDEITQRGI-DDVISWNSIVSAHVKSSNAWTALDLFSKMTL-IVHEKPTNERS 263
Query: 581 -LVLLCNIYASSGKWEEVAR 599
++ + NI + G + V +
Sbjct: 264 DIISIVNILPACGSLKAVPQ 283
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 193/615 (31%), Positives = 316/615 (51%), Gaps = 102/615 (16%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQ------------------------------ 143
D V+HN +++ + G+L++AR +FDEMPQ
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 144 -RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+NVVSWTA I+G QNG A++L++++L+S + P++ TF S++RAC+ L GLG
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMS 205
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+ ++K+ + L N+LI + + I A VF + KD+ SW +++D + ++D
Sbjct: 206 VLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDE 265
Query: 263 ---ARTVFNEMESPNLASWNTIIAGVASCSNANEAM-------------------SLFSE 300
AR +F+EM N SW+ +IA E++ S+ S
Sbjct: 266 LGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSA 325
Query: 301 MGDRELIPDGLTVR-------------------SLLCAC------------------TSP 323
+ E + G+ + + C C S
Sbjct: 326 LASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSW 385
Query: 324 LSLYQGMQIHSYIIKKGFYSNV-PVCN-----AILQ-----HQAGELFRLFSLMLASQTK 372
++ G ++ ++ + + N+ PV N AI+ Q E+F +F+ M+
Sbjct: 386 NAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEI 445
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ TF+ ++ ACA+ ASL+ G LH I+K G+ D +V L DMY K G + S++++
Sbjct: 446 PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKV 505
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGL 491
FN M + VSW+++I G A+ G EE+L LF M ++S + PN V + VL ACSH GL
Sbjct: 506 FNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGL 565
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
V++GL + M+ YG+ P +CVVD+L+RAGR+ EAE+FI M F + W +LL
Sbjct: 566 VDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALL 625
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
+ CKT+ N ++ +R A + ++ N A VLL NIYAS+G+W +V ++ MK +G++K
Sbjct: 626 SGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKK 685
Query: 612 VPGQSWIEIQTKIHA 626
G SW+EI+ ++H+
Sbjct: 686 SGGCSWVEIRDRVHS 700
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 139/584 (23%), Positives = 251/584 (42%), Gaps = 103/584 (17%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP-------------------- 113
T+F+ T L+ ++ ++ G +H H+ +
Sbjct: 15 THFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAE 74
Query: 114 -----------DAVLHNHILNMYGKCGSLEDARMVFDEMPQ------------------- 143
D V+HN +++ + G+L++AR +FDEMPQ
Sbjct: 75 ADQISKDFDGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRV 134
Query: 144 ------------RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+NVVSWTA I+G QNG A++L++++L+S + P++ TF S++RAC
Sbjct: 135 RESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRAC 194
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
+ L GLG + ++K+ + L N+LI + + I A VF + KD+ SW
Sbjct: 195 ANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWT 254
Query: 252 SMIDGFSKLD---FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+++D + ++D AR +F+EM N SW+ +IA E++ LF M P
Sbjct: 255 AILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKP 314
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLA 368
+ S+L A S +L GM IH ++ K GF +V V ++++
Sbjct: 315 NISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLI---------------- 358
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
D+ C T+ ++ T L ++ N ++ Y G +
Sbjct: 359 -----------DMYCKCGE-------TKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEE 400
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A+ LFN M + VSWS++I G+ +E ++F M G PN T +L AC+
Sbjct: 401 AKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACAS 460
Query: 489 VGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+++G L+ +I++ GI + + D+ A++G + ++ N+M ++ V W
Sbjct: 461 TASLDKGKNLHGKIVK--LGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNE-VSW 517
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
+++ G + E + K ++ L ++A S
Sbjct: 518 TAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACS 561
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 193/420 (45%), Gaps = 46/420 (10%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
LI+ C + + L R+V D + + D V IL++Y + L +AR +FDEMPQRN
Sbjct: 225 LITLCLRMGEIHLAREVFDRME----EKDVVSWTAILDLYVEMDELGEARRIFDEMPQRN 280
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VSW+AMIA Q+G ++ L+ +M+Q G P+ F SI+ A + + + G +H
Sbjct: 281 EVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHG 340
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDF 262
HV K + ++LI MY K D +F +I K++ SW +M+ G+S ++
Sbjct: 341 HVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEE 400
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A+ +FN M N SW+ IIAG C +E +F+EM IP+ T SLLCAC S
Sbjct: 401 AKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACAS 460
Query: 323 PLSLYQGMQIHSYIIK--------------------------KGFYSNVPVCN-----AI 351
SL +G +H I+K K ++ +P N A+
Sbjct: 461 TASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAM 520
Query: 352 LQ-----HQAGELFRLFSLM-LASQTKPDHITFNDVMGACAAMASLEMGT-QLHCYIMKT 404
+Q A E LF M S P+ + F V+ AC+ ++ G +
Sbjct: 521 IQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVY 580
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKL 463
GL ++DM + G L A E M P+ +W++L+ G + E A ++
Sbjct: 581 GLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERV 640
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 149/314 (47%), Gaps = 44/314 (14%)
Query: 19 WDA-FELCMLLDQAGE---VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFLQNN 73
W A +L + +D+ GE + D +R + W + + C+ E+L F +Q
Sbjct: 253 WTAILDLYVEMDELGEARRIFDEMPQRNEVSWS-AMIARYCQSGYPEESLRLFCRMIQEG 311
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
F+ S ++ ++SA +S+ +LQ G +H H+ + D + + +++MY KCG +D
Sbjct: 312 --FKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKD 369
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNG-------------------------------QE 162
R +FD + ++N+VSW AM+ G S NG Q
Sbjct: 370 GRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQF 429
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
+ E++ +M+ G +P++ TF S++ AC+ + G+ LH ++K AL
Sbjct: 430 DEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTAL 489
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR---TVFNEMESPNLASWN 279
MY K I + VF+ + +K+ SW +MI G ++ A T+F EME + + N
Sbjct: 490 TDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPN 549
Query: 280 TI--IAGVASCSNA 291
+ +A + +CS++
Sbjct: 550 EVMFLAVLFACSHS 563
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 199/444 (44%), Gaps = 67/444 (15%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST++ L+ AC+S SL G+ +H I+ Q D + + +MY K G +E ++ VF+
Sbjct: 449 STFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNR 508
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRAC--SGLCCV 197
MP++N VSWTAMI G +++G ++ L+ +M + S + P++ F +++ AC SGL
Sbjct: 509 MPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDK 568
Query: 198 GL--GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN-VFSSIARKDITSWGSMI 254
GL + A G H ++ M ++ R+ +A ++S + + +W +++
Sbjct: 569 GLWYFNSMEAVYGLKPKGRHF---TCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALL 625
Query: 255 DG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
G + + A V EM N A + + AS + + + M + L
Sbjct: 626 SGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKK 685
Query: 309 DG----LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFS 364
G + +R ++HS+ + G +S Q+ E++ +
Sbjct: 686 SGGCSWVEIRD---------------RVHSFYSEDGAHS-----------QSAEIYEILE 719
Query: 365 LMLASQTKPDHITFNDVMGACAA-MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
L L + K F +V+ C++ +AS+ + + +T LA+D + + L D+
Sbjct: 720 L-LGYEMK----CFKEVLAFCSSKLASIAISN----FQKQTSLAMDSYTLKSLSDLPEIF 770
Query: 424 GSLGSARELFNFMEDPDVVSWSSLI--VGYAQFGCGEEA------LKLFRRMRSSGVRPN 475
S+ S R + + + + S I V A G G+ L++ R S G R N
Sbjct: 771 RSIFSFRYFNSLQSECFPICFHSDINMVISAPTGSGKTVLFELCILRVLSRFISEG-RFN 829
Query: 476 HV--TLVGVLTACSHVGLVEEGLQ 497
H+ TL + A S LV+E L+
Sbjct: 830 HIKGTLKTIYIAPSK-ALVQEKLR 852
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/584 (31%), Positives = 316/584 (54%), Gaps = 73/584 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y+ LI+ + +SL R VH +++ S + H +++ Y KCGSL +AR +FDE+P
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSFLGHK-LIDGYIKCGSLAEARKLFDELP 62
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R++V+W +MI+ +G+ A+E Y ML G++PD +TF +I +A S L + G++
Sbjct: 63 SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122
Query: 203 LH--AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
H A V+ E ++ +AL+ MY KFD++ DA VF + KD+ + ++I G+++
Sbjct: 123 AHGLAVVLGLEVLDGFVA-SALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQH 181
Query: 260 -LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
LD EA+ +F +M +R + P+ T+ +L
Sbjct: 182 GLD------------------------------GEALKIFEDMVNRGVKPNEYTLACILI 211
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPV----------CNAI----------------- 351
C + L G IH ++K G S V CN I
Sbjct: 212 NCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVT 271
Query: 352 --------LQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+Q+ E+ +F M+ P+ T + ++ AC+++A LE+G Q+H M
Sbjct: 272 WTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITM 331
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K GL + + L+++Y KCG++ AR +F+ + + DVV+ +S+I YAQ G G EAL+
Sbjct: 332 KLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALE 391
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF R+++ G+ PN VT + +L AC++ GLVEEG Q++ ++N + I T + +C++DLL
Sbjct: 392 LFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLL 451
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R+ R+ EA I ++ + D+V+W++LL SCK HG V++ ++ IL++ P + +
Sbjct: 452 GRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHI 510
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
LL N+YAS+GKW +V + ++++ ++K P SW+++ ++H
Sbjct: 511 LLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHT 554
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 202/459 (44%), Gaps = 68/459 (14%)
Query: 47 DFDLFSSL----CKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGR 100
D LF++L + L EAL F ++ N ++P+ Y A ++ C +L L G+
Sbjct: 167 DVVLFTALIVGYAQHGLDGEALKIF---EDMVNRGVKPNEYTLACILINCGNLGDLVNGQ 223
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
+H ++ S + +L MY +C +ED+ VF+++ N V+WT+ + G QNG
Sbjct: 224 LIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNG 283
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
+E A+ ++ +M++ + P+ FT SI++ACS L + +G Q+HA +K + +
Sbjct: 284 REEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGA 343
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
ALI +Y K + A +VF + D+ + SMI +++ F
Sbjct: 344 ALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGF------------------ 385
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+EA+ LF + + L+P+G+T S+L AC + + +G QI + I
Sbjct: 386 ----------GHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASI---- 431
Query: 341 FYSNVPVCNAILQHQA------GELFRL--FSLMLASQTKPDHITFNDVMGACAAMASLE 392
N + H G RL ++++ PD + + ++ +C +E
Sbjct: 432 --RNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVE 489
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-----PDVVSWSSL 447
M ++ I++ D L ++Y G E+ + + D +SW +
Sbjct: 490 MAEKVMSKILELAPG-DGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDV 548
Query: 448 IVGYAQFGCGE----EALKLF-------RRMRSSGVRPN 475
F G+ +L++F +++++ G PN
Sbjct: 549 DREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPN 587
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 276/500 (55%), Gaps = 17/500 (3%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
+E+A VFD++P+ N W AM G SQN I L+ QM +MP+ FTF I+++
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C + + G ++H VIKS ++ LI MY I A+ VF + +++ +W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 251 GSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+MI+G+ L AR +F+ ++ WNT+I+G + A LF +M +++++
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVM 180
Query: 308 P-----DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL 362
+G + AC + S+ G Y+ N E+
Sbjct: 181 SWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTR----NGCFS----EVLSA 232
Query: 363 FSLMLASQTK-PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F ML T P+ T +V+ ACA + +L++G +H Y G +V+V N LMDMY
Sbjct: 233 FKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYA 292
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG + +A ++F M++ D++SW+++I G A G G +AL LF M+ +G P+ +T +G
Sbjct: 293 KCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIG 352
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+L AC+H+GLVE+G ++ M ++Y I+P E C+VDLL RAG + A DFI +M +
Sbjct: 353 ILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIE 412
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D V+W +LL +C+ + NV++ + A E +++ +P N A V+L NIY G+W++VARL
Sbjct: 413 ADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLK 472
Query: 602 GSMKERGVRKVPGQSWIEIQ 621
+M++ G +K+PG S IE+
Sbjct: 473 VAMRDTGFKKLPGCSLIEVN 492
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 146/324 (45%), Gaps = 58/324 (17%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+IS + + R++ D + + D + N +LN Y G + +F+EMP+RN
Sbjct: 154 MISGYIEAKDVIRARELFDKMPNK----DVMSWNTVLNGYASNGDVMACERLFEEMPERN 209
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLH 204
V SW A+I G ++NG + + + +ML G ++P+ T +++ AC+ L + LG+ +H
Sbjct: 210 VFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVH 269
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ + ++ +NAL+ MY K + A +VF S+ KD+ S
Sbjct: 270 VYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLIS--------------- 314
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
WNTII G+A + +A++LFS M PDG+T +LCACT
Sbjct: 315 -------------WNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACT--- 358
Query: 325 SLYQGMQIHSYIIKKGF---------YSNVPV-----CNAILQHQAGELFRLFSLMLASQ 370
H +++ GF YS VP C L +AG L +
Sbjct: 359 --------HMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMP 410
Query: 371 TKPDHITFNDVMGACAAMASLEMG 394
+ D + + ++GAC ++E+
Sbjct: 411 IEADAVIWAALLGACRVYKNVELA 434
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 40 RRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
R F+++ + ++FS + ++E L AF + + +T +++SAC+ L
Sbjct: 200 RLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARL 259
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+L LG+ VH + S + + + N +++MY KCG +E A VF M ++++SW +I
Sbjct: 260 GALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTII 319
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
G + +G A+ L+ M +G PD TF I+ AC+ + V G
Sbjct: 320 GGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDG 366
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 183/613 (29%), Positives = 323/613 (52%), Gaps = 70/613 (11%)
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP T ++ AC L S + G H I + + + + N ++ MY +CGSLE+A M
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218
Query: 137 VFDEMPQR---NVVSWTAMIAGCSQNGQENAAIELYVQML------QSGLMPDQFTFGSI 187
+FDE+ QR +V+SW ++++ ++ A++L+ +M + D + +I
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 278
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+ AC L V +++H + I++ + NALI Y K + +A VF+ + KD+
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338
Query: 248 TSWGSMIDGFSK---LDFARTVFNEMESPNLA----SWNTIIAGVASCSNANEAMSLFSE 300
SW +M+ G+S+ + A +F M N+ +W +IAG + ++EA++LF +
Sbjct: 339 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 398
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK----------GFYSNVPVCNA 350
M +P+ +T+ S+L AC S + QG +IH+Y +K G ++ V NA
Sbjct: 399 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 458
Query: 351 ILQH--------------------------------------QAGELFRLFSLMLASQ-- 370
++ + + +LF M++
Sbjct: 459 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 518
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL--ALDVFVMNGLMDMYVKCGSLGS 428
P+ T + ++ ACA +A++ +G Q+H Y+++ + FV N L+DMY KCG + +
Sbjct: 519 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDT 578
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
AR +F+ M +SW+S++ GY G G EAL +F +MR +G P+ +T + VL ACSH
Sbjct: 579 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 638
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
G+V++GL + M +YG+ P E +C +DLLAR+GR+ +A + M + VVW
Sbjct: 639 CGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWV 698
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL++C+ H NV++ + A +++++ N + L+ NIYA++G+W++VAR+ MK+ G
Sbjct: 699 ALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG 758
Query: 609 VRKVPGQSWIEIQ 621
++K PG SW++ Q
Sbjct: 759 IKKRPGCSWVQGQ 771
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 145/620 (23%), Positives = 254/620 (40%), Gaps = 153/620 (24%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSS-----------------KCQP---DAVL 117
+ PS +A L+ C S ++ ++H I++S +P L
Sbjct: 42 VYPSHFASLLKECKSANTVH---QIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSL 98
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
++ Y CG+ + A +V + + V W +I + G+ ++AI + +ML++G
Sbjct: 99 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 158
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
PD FT +++AC L G H + + S++ NAL+AMY++ + +A
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+F I ++ I ++ SWN+I++ SNA A+ L
Sbjct: 219 IFDEITQRGID-------------------------DVISWNSIVSAHVKSSNAWTALDL 253
Query: 298 FSEM---------GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
FS+M +R D +++ ++L AC S ++ Q ++H I+ G + +V V
Sbjct: 254 FSKMTLIVHEKPTNERS---DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVG 310
Query: 349 NAILQ---------------------------------HQAGEL---FRLFSLMLASQTK 372
NA++ Q+G F LF M
Sbjct: 311 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIP 370
Query: 373 PDHITFNDVMGA--------------------------------CAAMASL---EMGTQL 397
D +T+ V+ +A ASL GT++
Sbjct: 371 LDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEI 430
Query: 398 HCYIMKT----------GLALDVFVMNGLMDMYVKCGSLGSARELFN--FMEDPDVVSWS 445
H Y +K G D+ V N L+DMY KC S +AR +F+ +E+ +VV+W+
Sbjct: 431 HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWT 490
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSS--GVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IM 502
+I G+AQ+G +ALKLF M S GV PN T+ +L AC+H+ + G Q++ ++
Sbjct: 491 VMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 550
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
++ +C++D+ ++ G V A + M+ + W S++ HG
Sbjct: 551 RHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHG---- 605
Query: 563 GKRAAENILKIDPTNSAALV 582
R +E + D A V
Sbjct: 606 --RGSEALDIFDKMRKAGFV 623
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 23/200 (11%)
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
G++ Y+ CG+ A + + V W+ LI + + G + A+ + RM +G R
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV------VDLLARAGR 527
P+H TL VL AC L YR +G+I S V V + +R G
Sbjct: 160 PDHFTLPHVLKACGE-------LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 212
Query: 528 VHEAE---DFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAA 580
+ EA D I Q DD++ W S++++ N +D+ + I+ PTN +
Sbjct: 213 LEEASMIFDEITQRGI-DDVISWNSIVSAHVKSSNAWTALDLFSKMTL-IVHEKPTNERS 270
Query: 581 -LVLLCNIYASSGKWEEVAR 599
++ + NI + G + V +
Sbjct: 271 DIISIVNILPACGSLKAVPQ 290
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 283/549 (51%), Gaps = 75/549 (13%)
Query: 121 ILNMYGKCGSLEDARMVF-DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++NMY +C +E+A +VF D +RNV ++ A+IAG NG + Y +M G+MP
Sbjct: 16 LINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMP 75
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D+FTF ++RAC V R++H + K ++ +AL+ Y K D DA VF
Sbjct: 76 DKFTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVF 132
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ +D+ WN +I G + N+A+ +F
Sbjct: 133 EELPERDVVL----------------------------WNAMINGYTKIGHLNKAVVVFK 164
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------Q 353
MG+ + T S+L TS + G IH + K G+ S V V NA++ +
Sbjct: 165 RMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCK 224
Query: 354 HQAGEL------------------------------FRLFSLMLASQTKPDHITFNDVMG 383
H L RLF ML S+ PD IT V+
Sbjct: 225 HTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLP 284
Query: 384 ACAAMASLEMGTQLHCYIMKTGLAL-----DVFVMNGLMDMYVKCGSLGSARELFNFMED 438
AC+ +A+L G ++H Y++ GL DV + N +MDMY KCG + +A +F+ M +
Sbjct: 285 ACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRN 344
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
DV SW+ +I+GYA G G EAL +F RM + ++P+ VT VGVL+ACSH G V +G
Sbjct: 345 KDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSF 404
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
M+ E+G+IPT E +C++D+L RAG + EA D ++ +D++++W +LL +C+ HG
Sbjct: 405 LTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHG 464
Query: 559 NVDVGKRAAENILKIDPTN--SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
N ++G E I +++P + S + +L+ ++Y G++EE + +MKE+ V+K PG S
Sbjct: 465 NAELGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCS 524
Query: 617 WIEIQTKIH 625
WIE++ ++
Sbjct: 525 WIELKDGLY 533
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 211/492 (42%), Gaps = 89/492 (18%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
F F + + + P T+ ++ AC + RK+H + + + + + ++N
Sbjct: 61 GFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVN 117
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
Y K EDA VF+E+P+R+VV W AMI G ++ G N A+ ++ +M + G+ +FT
Sbjct: 118 TYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFT 177
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
SI+ + + + GR +H V K + S + NALI MY K DA +F I
Sbjct: 178 TTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMIN 237
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
KD+ S WN+II+ C + + + LF +M
Sbjct: 238 EKDLFS----------------------------WNSIISAHEQCDDHDGTLRLFGKMLG 269
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN-----VPVCNAILQ----- 353
++PD +T+ ++L AC+ +L G +IH Y+I G N V + NAI+
Sbjct: 270 SRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKC 329
Query: 354 ------------------------------HQAG-ELFRLFSLMLASQTKPDHITFNDVM 382
H G E +F M +Q KPD +TF V+
Sbjct: 330 GCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVL 389
Query: 383 GACAAMASLEMGTQLHCYI-MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPD 440
AC+ + G + ++ G+ + ++DM + G LG A +L + + +
Sbjct: 390 SACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDN 449
Query: 441 VVSWSSLIV-----GYAQFG--CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
++ W +L+ G A+ G GE+ +L + SG +L GV VG E
Sbjct: 450 LILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGSYILMSSLYGV------VGRYE 503
Query: 494 EGLQLYRIMQNE 505
E L++ R M+ +
Sbjct: 504 EALEVRRTMKEQ 515
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 302/610 (49%), Gaps = 70/610 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + EAL + ++ + T+ AC+ LR + GR VH L++
Sbjct: 83 LLRSYTGLGCHREALAVYSAMRAFDHL-----TFPFAAKACAGLRLGRHGRAVHCRALAA 137
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
D + N +++MY CG + A VF M R VVSW A+IAGC +NG A+E++
Sbjct: 138 GFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVF 197
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M G+ D+ T S++ AC+ + GR +H V G ++ +NALI MY K
Sbjct: 198 GEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKC 257
Query: 230 DRILDAWNVFSSIAR-KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ DA VF KD+ SW +MI + V N+
Sbjct: 258 RSLEDARRVFDHCKHDKDVVSWTAMIGAY--------VLND------------------- 290
Query: 289 SNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
A EA+SL +M P+G+T+ LL AC S S H+ I+ G S++ V
Sbjct: 291 -RAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAV 349
Query: 348 CNAILQHQA-----------------------------------GELFRLFSLMLASQTK 372
A++ A + LF M+A +
Sbjct: 350 ETALIDAYARCGKMKLMRLTLERGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVR 409
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD T ++ A A A L+ G +HC+++ G + GL+D+Y K G L +A L
Sbjct: 410 PDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWAL 469
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F ++ + DVV+W+++I GY G A+ L+ RM SG +PN VT+ +L ACSH G++
Sbjct: 470 FQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMI 529
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+EG+++++ M+N +G++P E SC+VD+L RAGR+ EA I M F+ VW +LL
Sbjct: 530 DEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLG 589
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
+C H NV+ G+ AA+ + ++DP N+ + VLL NIYA++ +W +V + M ERG+ K
Sbjct: 590 ACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKE 649
Query: 613 PGQSWIEIQT 622
PG S +E ++
Sbjct: 650 PGSSLVEARS 659
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 207/509 (40%), Gaps = 84/509 (16%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWT-AMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+Y CG A + +MPQ VS++ +++ + G A+ +Y M D
Sbjct: 54 VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF----DHL 109
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TF +AC+GL GR +H + + G QNALI+MY + A VF ++
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAM 169
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+ + SW N +IAG A A+ +F EM
Sbjct: 170 RNRTVVSW----------------------------NAVIAGCVKNGYAERALEVFGEMA 201
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA------------ 350
+ D TV S+L AC L G +H + KG V V NA
Sbjct: 202 ADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLE 261
Query: 351 -------------------------ILQHQAGELFRLFSLMLASQTK-PDHITFNDVMGA 384
+L +A E L ML S P+ +T ++ A
Sbjct: 262 DARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSA 321
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR---ELFNFMEDPDV 441
CA+M S + H ++ GL D+ V L+D Y +CG + R E ++ +
Sbjct: 322 CASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE--- 378
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+W++ + GY G ++A++LF+RM + VRP+ T+ +L A + ++EG ++
Sbjct: 379 -TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCF 437
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ G + + E + ++D+ ++AG + A + + D+V W +++A HG+
Sbjct: 438 LLT-LGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLP-EKDVVAWTTIIAGYGIHGHAR 495
Query: 562 VG----KRAAENILKIDPTNSAALVLLCN 586
R E+ K + A L+ C+
Sbjct: 496 TAILLYDRMVESGGKPNTVTIATLLYACS 524
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS-SLIVGYAQFGCGEEALK 462
+G L ++ L +Y CG SA L M P VS+S SL+ Y GC EAL
Sbjct: 39 SGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALA 98
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDL 521
++ MR+ +H+T AC+ + L G ++ R + +G ++ ++ +
Sbjct: 99 VYSAMRAF----DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFG--GDTYVQNALISM 152
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD-----VGKRAAENILKIDPT 576
G V AE M + +V W +++A C +G + G+ AA+ + ID
Sbjct: 153 YMSCGDVGAAEAVFGAMR-NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGV-GIDRA 210
Query: 577 NSAALVLLC 585
+++ C
Sbjct: 211 TVVSVLPAC 219
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 290/548 (52%), Gaps = 93/548 (16%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF-- 229
ML SG PD F S++++C+ + + G +H +I+ G L + NAL+ MY+KF
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 230 ------DRILDA-------------------------------------WNVFSSI---- 242
R D+ N S+I
Sbjct: 61 LEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQV 120
Query: 243 -ARKDITSWGSMIDGFSK-------LDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
K + G D +SK L R VF M ++ SWNT+I+G A +A
Sbjct: 121 NTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDA 180
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-- 352
+ + EMG+ +L PD T+ S+L ++L +G +IH Y I+ G+ ++V + ++++
Sbjct: 181 LMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDM 240
Query: 353 ------------------QH-------------QAG---ELFRLFSLMLASQTKPDHITF 378
QH Q G E + F ML ++ KP+H++F
Sbjct: 241 YAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSF 300
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ +M ACA + +L +G QLH YI+++ +VF+ + L+DMY KCG++ +AR +F+ ME
Sbjct: 301 SSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL 360
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D+VSW+++I+GYA G +A+ LF+RM GV+PN+V + VLTACSH GLV+E +
Sbjct: 361 YDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKY 420
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ M +Y IIP E + V DLL R GR+ EA +FI+ M + VW +LLA+C+ H
Sbjct: 421 FNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHK 480
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N+++ ++ ++ + +DP N A VLL NIY+++G+W++ +L +M+++G++K P SWI
Sbjct: 481 NIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWI 540
Query: 619 EIQTKIHA 626
EI+ K+HA
Sbjct: 541 EIKNKVHA 548
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 129/244 (52%), Gaps = 8/244 (3%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N + R T + ++ + +L G+++H + + + D + + +++MY KC ++
Sbjct: 189 NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVD 248
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
D+ VF +PQ + +SW ++IAGC QNG + ++ + QML + + P+ +F SI+ AC+
Sbjct: 249 DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACA 308
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L + LG+QLH ++I+S ++ +AL+ MY K I A +F + D+ SW +
Sbjct: 309 HLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTA 368
Query: 253 MIDGFSKLDFAR---TVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMG-DR 304
MI G++ A ++F ME PN ++ ++ + +EA F+ M D
Sbjct: 369 MIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDY 428
Query: 305 ELIP 308
+IP
Sbjct: 429 RIIP 432
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 277/504 (54%), Gaps = 40/504 (7%)
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
E + +Q+L P T+ ++++ C L + G ++HAH S ++ N
Sbjct: 70 EQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNR 129
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASW 278
++ MY K + +++A +F +A +D+ SW MI G++K L AR +F++M + SW
Sbjct: 130 ILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSW 189
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIP-DGLTVRSLLCACTSPLSLYQGMQIHSYII 337
+ +G EA+ LF M E + T+ S L A + SL+ G +IH +I+
Sbjct: 190 TAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHIL 249
Query: 338 KKGFYSNVPVCNAI------------------------------------LQHQAGELFR 361
+ G + V +A+ + + E F
Sbjct: 250 RIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFA 309
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
LFS +L S P+ TF+ V+ ACA A+ E+G Q+H Y+ + G F + L+ MY
Sbjct: 310 LFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYT 369
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG++ +AR +FN M PD+VSW+SLI GYAQ G +EAL+ F + SG +P+H+T VG
Sbjct: 370 KCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVG 429
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL+AC+H GLV++GL+ + ++ ++G+ T + +C++DLL+R+GR+ EAED I++M +
Sbjct: 430 VLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIE 489
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D +W SLL C+ HGN+ + KRAAE + +I+P N A L NIYA++G W VA +
Sbjct: 490 PDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVR 549
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
M RGV K PG SWIEI+ ++H
Sbjct: 550 KVMDARGVVKKPGLSWIEIKREVH 573
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 210/467 (44%), Gaps = 49/467 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L +A ++ D R + W + S + + + EAL F +Q + NF+ T + +
Sbjct: 171 LQEARKLFDQMTERDNFSWT-AMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSAL 229
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
+A ++++SL LG+++H HIL D V+ + + +MYGKCGS+ +AR +FD+ R+VV
Sbjct: 230 AASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVV 289
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SWTAMI + G+ L+ +L+SG+ P++FTF ++ AC+ LG+Q+H ++
Sbjct: 290 SWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYM 349
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ + + L+ MYTK I +A VF+ + R D+ SW S+I G+
Sbjct: 350 TRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGY---------- 399
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
A +EA+ F + PD +T +L ACT +
Sbjct: 400 ------------------AQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVD 441
Query: 328 QGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G++ I +K ++ C L ++G L ++ +PD + ++G
Sbjct: 442 KGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGG 501
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV-- 442
C +L++ + + + + L ++Y G G E+ M+ VV
Sbjct: 502 CRIHGNLKLAKRAAEALFEIE-PENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKK 560
Query: 443 ---SWSSL-------IVGYAQFGCGEEAL----KLFRRMRSSGVRPN 475
SW + +VG +E KL +RM+ G P+
Sbjct: 561 PGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPD 607
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 199/483 (41%), Gaps = 112/483 (23%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRI---------RPS--TYADLISACSSLRSLQ 97
+L LCK N + EA+ D L R RPS TY+ L+ C LR+L
Sbjct: 50 ELVKRLCKDNNFKEAI---DILCEQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALD 106
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGKC----------------------------- 128
G KVH H +S P V+ N IL+MY KC
Sbjct: 107 EGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYA 166
Query: 129 --GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFG 185
G L++AR +FD+M +R+ SWTAM +G ++ Q A+EL+ M + ++FT
Sbjct: 167 KAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMS 226
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
S + A + + + LG+++H H+++ + +AL MY K I +A ++F +
Sbjct: 227 SALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDR 286
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
D+ SW +MID + F E E +LFS++
Sbjct: 287 DVVSWTAMIDRY---------FKE-------------------GRREEGFALFSDLLKSG 318
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------------------------ 341
+ P+ T +L AC + G Q+H Y+ + GF
Sbjct: 319 IWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNAR 378
Query: 342 --YSNVP----------VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
++ +P + Q E + F L+L S T+PDHITF V+ AC
Sbjct: 379 RVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAG 438
Query: 390 SLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSL 447
++ G + I K GL L+D+ + G L A ++ + M +PD W+SL
Sbjct: 439 LVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASL 498
Query: 448 IVG 450
+ G
Sbjct: 499 LGG 501
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 302/553 (54%), Gaps = 22/553 (3%)
Query: 79 RPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP Y+ L+ A + SL R + D + D+V +N +++ + G + AR
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARH 152
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
FD P+++ VSW M+A +NG+ +E + S D ++ +++
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGR----VEEARGLFNSRTEWDAISWNALMSGYVQWGK 208
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ R+L + G ++S N +++ Y + +++A +F + +D+ +W +++ G
Sbjct: 209 MSEARELFDRMP----GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+++ L+ AR VF+ M N SWN ++A +EA LF+ M R + +
Sbjct: 265 YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA----SW 320
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLASQTK 372
++L L + + + +K S + A Q + E +LF M
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+ F V+ CA +A+LE G QLH +++ G + FV N L+ MY KCG++ AR
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F ME+ DVVSW+++I GYA+ G G+EAL++F MR++ +P+ +TLVGVL ACSH GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E+G+ + M +++G+ E +C++DLL RAGR+ EA D + M F+ D +W +LL
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
+ + H N ++G+ AAE I +++P N+ VLL NIYASSGKW + ++ M+ERGV+KV
Sbjct: 561 ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKV 620
Query: 613 PGQSWIEIQTKIH 625
PG SWIE+Q K+H
Sbjct: 621 PGFSWIEVQNKVH 633
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 338/622 (54%), Gaps = 28/622 (4%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDIWDFDLFS--SLCKQ---NLYNEALVAFDFLQNNTNFRI 78
L + + G V D R FD++ D D+ S SL N +N+ + L +R
Sbjct: 143 LVDMYTKTGNVRDG-RRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRP 201
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T + +I+A ++ ++ +G ++H ++ + + ++ N +++M K G L DAR+VF
Sbjct: 202 DYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVF 261
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D M ++ VSW +MIAG NGQ+ A E + M +G P TF S+I++C+ L +G
Sbjct: 262 DNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELG 321
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSMIDGF 257
L R LH +KS ++ AL+ TK I DA+++FS + + + SW +MI G+
Sbjct: 322 LVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGY 381
Query: 258 ---SKLDFARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
D A +F+ M PN +++TI+ + +A + +E+
Sbjct: 382 LQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL----TVQHAVFISEIHAEVIKTNYEKSS 437
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL---FRLFSL 365
+LL A ++ +++ I K +V +A+L QAGE ++F
Sbjct: 438 SVGTALLDAFVKIGNISDAVKVFELIETK----DVIAWSAMLAGYAQAGETEEAAKIFHQ 493
Query: 366 MLASQTKPDHITFNDVMGACAA-MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
+ KP+ TF ++ AC A AS+E G Q H Y +K L + V + L+ +Y K G
Sbjct: 494 LTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRG 553
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
++ SA E+F ++ D+VSW+S+I GYAQ G ++AL++F M+ + + +T +GV++
Sbjct: 554 NIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVIS 613
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
AC+H GLV +G + IM N++ I PT E SC++DL +RAG + +A D IN M F
Sbjct: 614 ACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAA 673
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
VW+ +LA+ + H N+++GK AAE I+ ++P +SAA VLL NIYA++G W E + M
Sbjct: 674 TVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLM 733
Query: 605 KERGVRKVPGQSWIEIQTKIHA 626
+R V+K PG SWIE++ K ++
Sbjct: 734 DKRRVKKEPGYSWIEVKNKTYS 755
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 255/553 (46%), Gaps = 48/553 (8%)
Query: 78 IRPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P +Y ++S C+ + +G +VH + + N +++MY K G++ D R
Sbjct: 98 LSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGR 157
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFDEM R+VVSW +++ G S N + EL+ M G PD +T ++I A +
Sbjct: 158 RVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQG 217
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
V +G Q+HA V+K + + N+LI+M +K + DA VF ++ KD SW SMI
Sbjct: 218 AVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIA 277
Query: 256 G--FSKLDF-ARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
G + D A FN M+ P A++ ++I AS L + L
Sbjct: 278 GHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLST 337
Query: 309 DGLTVRSLLCACT---------SPLSLYQGMQ--IHSYIIKKGFYSNVPVCNAILQHQAG 357
+ + +L+ A T S SL G+Q + + G+ N A+
Sbjct: 338 NQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAV------ 391
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
LFSLM KP+H T++ ++ A+ +++H ++KT V L+
Sbjct: 392 ---NLFSLMRREGVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALL 444
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
D +VK G++ A ++F +E DV++WS+++ GYAQ G EEA K+F ++ G++PN
Sbjct: 445 DAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEF 504
Query: 478 TLVGVLTACSH-VGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVHEAE 532
T ++ AC+ VE+G Q + Y I CV V L A+ G + A
Sbjct: 505 TFCSIINACTAPTASVEQGKQFH-----AYAIKLRLNNALCVSSSLVTLYAKRGNIESAH 559
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCNIY 588
+ + + D+V W S+++ HG ++V + + L++D ++ C
Sbjct: 560 EIFKRQK-ERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHA 618
Query: 589 ASSGKWEEVARLM 601
GK + +M
Sbjct: 619 GLVGKGQNYFNIM 631
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 218/493 (44%), Gaps = 77/493 (15%)
Query: 111 CQPDAVLHNHILNMYGKCGSLED-----ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
C + +L +H++ + + L D A+ +FD+ P R++ ++ S+ Q A
Sbjct: 28 CHANPLLQSHVVALNART-LLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEA 86
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ L+V + +SGL PD +T ++ C+G +G Q+H +K HL N+L+ M
Sbjct: 87 LHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDM 146
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
YTK + D VF + +D+ SW S++ G+ SWN
Sbjct: 147 YTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGY-------------------SWNRF---- 183
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
++ LF M PD TV +++ A + ++ GMQIH+ ++K GF +
Sbjct: 184 -----NDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETER 238
Query: 346 PVCNA------------------------------------ILQHQAGELFRLFSLMLAS 369
VCN+ ++ Q E F F+ M +
Sbjct: 239 LVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLA 298
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
KP H TF V+ +CA++ L + LHC +K+GL+ + V+ LM KC + A
Sbjct: 299 GAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDA 358
Query: 430 RELFNFMED-PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
LF+ M VVSW+++I GY Q G ++A+ LF MR GV+PNH T +LT
Sbjct: 359 FSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHA 418
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
V + E ++ + + + T ++D + G + +A + ++ D++ W
Sbjct: 419 VFISEIHAEVIKTNYEKSSSVGT-----ALLDAFVKIGNISDAVK-VFELIETKDVIAWS 472
Query: 549 SLLASCKTHGNVD 561
++LA G +
Sbjct: 473 AMLAGYAQAGETE 485
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 197/687 (28%), Positives = 343/687 (49%), Gaps = 125/687 (18%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
VD+ ++ FDDI W+ + S L + L ++ L F L N ST+A ++
Sbjct: 61 VDNAIKLFDDIPSSNVSFWN-KVISGLLAKKLASQVLGLFS-LMITENVTPDESTFASVL 118
Query: 88 SACSSLRS-LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
ACS ++ Q+ ++H I+ ++ N ++++Y K G ++ A++VF+ + ++
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSW AMI+G SQNG+E+ AI L+ QM +S ++P + F S++ AC+ + LG QLH
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
++K S NAL+ +Y+++ ++ A +FS + R+D S+ S+I G ++ F
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF---- 294
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
++ A+ LF +M + PD +TV SLL AC S +
Sbjct: 295 ------------------------SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAG 330
Query: 327 YQGMQIHSYIIKKGFYS-------------------------------NVPVCNAIL--Q 353
Y+G Q+HSY+IK G S NV + N +L
Sbjct: 331 YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390
Query: 354 HQAGELFRLFSLMLASQTK---PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
Q G L + + L Q + P+ T+ ++ C ++ +L++G Q+H ++K+G +V
Sbjct: 391 GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+V + L+DMY K G L +AR + + + DVVSW+++I GY Q EALKLF+ M +
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQ 510
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQL----YRIMQNEYGIIPTRERRSCVVDLLARAG 526
G+R +++ ++AC+ + + +G Q+ Y +E I + ++ L ++ G
Sbjct: 511 GIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCG 570
Query: 527 RVHEAE-----------------------------------------------DFINQMA 539
+ +A+ F+ +M
Sbjct: 571 SIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMP 630
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ D ++W++LL++C H N+++G+ AA ++L+++P +SA VLL N+YA SGKW+ R
Sbjct: 631 IEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDR 690
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIHA 626
MK+RGV+K PG+SWIE++ IHA
Sbjct: 691 TRQMMKDRGVKKEPGRSWIEVKNSIHA 717
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 241/519 (46%), Gaps = 69/519 (13%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
R TY L C + SL +K+H I S + VL + ++++Y G +++A
Sbjct: 7 RANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIK 66
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS-GLC 195
+FD++P NV W +I+G + + L+ M+ + PD+ TF S++RACS G
Sbjct: 67 LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKA 126
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ Q+HA +I GS + N LI +Y+K + A VF + KD SW +MI
Sbjct: 127 PFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMIS 186
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G S+ N E +EA+ LF +M +IP S
Sbjct: 187 GLSQ--------NGRE--------------------DEAILLFCQMHKSAVIPTPYVFSS 218
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL-------------- 359
+L ACT G Q+H +I+K G S VCNA+ L + G L
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278
Query: 360 --------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+LF M KPD +T ++ ACA++ + G QLH
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
Y++K G++ D+ + L+D+YVKC + +A E F E +VV W+ ++V Y Q G E
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSE 398
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV 518
+ +F +M+ G+ PN T +L C+ +G ++ G Q++ +++++ G S +
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS--GFQFNVYVCSVL 456
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+D+ A+ G + A + ++ ++D+V W +++A H
Sbjct: 457 IDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 35/324 (10%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
A E + S + R D I L S L ++ + AL F+ +Q + ++P T A L+S
Sbjct: 266 AAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC---MKPDCVTVASLLS 322
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+S+ + G+++H +++ D ++ +L++Y KC +E A F NVV
Sbjct: 323 ACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVL 382
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W M+ Q G + + +++QM GLMP+Q+T+ SI+R C+ L + LG Q+H VI
Sbjct: 383 WNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVI 442
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTVF 267
KS ++ + LI MY K + A + + +D+ SW +MI G+++ D FA
Sbjct: 443 KSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA---- 498
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
EA+ LF EM ++ + D + S + AC +L
Sbjct: 499 -------------------------EALKLFQEMENQGIRSDNIGFSSAISACAGIQALN 533
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAI 351
QG QIH+ G+ ++ + NA+
Sbjct: 534 QGQQIHAQSYISGYSEDLSIGNAL 557
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/607 (29%), Positives = 295/607 (48%), Gaps = 76/607 (12%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV------HDHILSSKCQPDA 115
EAL+ F +N + P D +L++ LG + H + S
Sbjct: 106 EALILF------SNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSV 159
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
+ + +++MY K G +E VF++M RNVVSWTA+IAG G + + +M +S
Sbjct: 160 FVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRS 219
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
+ D TF ++A + + G+ +H IK N L MY K
Sbjct: 220 KVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKC------ 273
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
K D+ +F +M P++ SW T+I+ A+
Sbjct: 274 ----------------------GKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAV 311
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
F M + P+ T +++ +C + + G QIH ++++ G + + V N+I+
Sbjct: 312 EAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLY 371
Query: 354 -------------------------------HQAG---ELFRLFSLMLASQTKPDHITFN 379
Q G E F S M KP+ +
Sbjct: 372 SKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALS 431
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V+ C +MA LE G Q+H +++ G+ + V + ++ MY KCGS+ A ++FN M+
Sbjct: 432 SVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKIN 491
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D++SW+++I GYA+ G +EA+ LF ++ S G++P++V +GVLTAC+H G+V+ G +
Sbjct: 492 DIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYF 551
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+M N Y I P++E C++DLL RAGR+ EAE I M F D VVW +LL +C+ HG+
Sbjct: 552 MLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGD 611
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
VD G+ AE +L++DP ++ + L NIYA+ G+W+E A + MK +GV K G SW+
Sbjct: 612 VDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVN 671
Query: 620 IQTKIHA 626
+ +++A
Sbjct: 672 VNDQLNA 678
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 227/538 (42%), Gaps = 79/538 (14%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHI-LSSKCQPDAVL 117
LY E VA ++ N + +LI + + VH+ + L+S+
Sbjct: 11 LYKETRVALHYISNRYILTGTATECRELIQQPIQEQPAENAYSVHNMLELNSE------- 63
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSG 176
L K G L AR +FD+M R+ +SWT +IAG A+ L+ M + G
Sbjct: 64 ----LKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPG 119
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
DQF ++AC+ + G LH +KS + +ALI MY K +I
Sbjct: 120 PQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGC 179
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF + +++ SW IIAG+ E +
Sbjct: 180 RVFEKMMTRNVV----------------------------SWTAIIAGLVHAGYNMEGLL 211
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN--AILQH 354
FSEM ++ D T L A L+ G IH+ IK+GF + V N A + +
Sbjct: 212 YFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYN 271
Query: 355 QAGE---LFRL-------------------------------FSLMLASQTKPDHITFND 380
+ G+ + RL F M S P+ TF
Sbjct: 272 KCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAA 331
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V+ +CA +A+ + G Q+H ++++ GL + V N ++ +Y KCG L SA +F+ + D
Sbjct: 332 VISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKD 391
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
++SWS++I Y+Q G +EA MR G +PN L VL+ C + L+E+G Q++
Sbjct: 392 IISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHA 451
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ GI S ++ + ++ G V EA N M +DI+ W +++ HG
Sbjct: 452 HLLC-IGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKI-NDIISWTAMINGYAEHG 507
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 280/535 (52%), Gaps = 33/535 (6%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L+ R VH I+S + ++ L ++ Y + AR VFDE+P+RNV+ MI
Sbjct: 56 LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
NG I+++ M + PD +TF +++ACS + +G+++H K S
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSST 175
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
L N L++MY K GF L AR V +EM ++
Sbjct: 176 LFVGNGLVSMYGKC--------------------------GF--LSEARLVLDEMSRRDV 207
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWN+++AG A ++A+ + EM ++ D T+ SLL A ++ + M +
Sbjct: 208 VSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN-TTTENVMYVKDM 266
Query: 336 IIKKGFYS----NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
K G S NV + + E L+S M A +PD ++ V+ AC ++L
Sbjct: 267 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSAL 326
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+G ++H YI + L ++ + N L+DMY KCG L AR++F M+ DVVSW+++I Y
Sbjct: 327 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAY 386
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G G +A+ LF +M+ SG+ P+ + V L ACSH GL+EEG +++M + Y I P
Sbjct: 387 GFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 446
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E +C+VDLL RAG+V EA FI +M + + VW +LL +C+ H N D+G AA+ +
Sbjct: 447 LEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLF 506
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++ P S VLL NIYA +G+WEEV + MK +G++K PG S +E+ IH
Sbjct: 507 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 561
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/527 (22%), Positives = 216/527 (40%), Gaps = 105/527 (19%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
+ S Y E + F + + ++P T+ ++ ACS ++ +G+K+H
Sbjct: 112 MIRSYVNNGFYREGIQVFGTM---CSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSAT 168
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ N +++MYGKCG L +AR+V DEM +R+VVSW +++AG +QN + + A+E
Sbjct: 169 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALE 228
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH-LISQNALIAMY 226
+ +M + D T S++ A S + ++ + + G L+S N +I +Y
Sbjct: 229 VCREMESVKISHDAGTMASLLPAVSNTTTENV---MYVKDMFFKMGKKSLVSWNVMIGVY 285
Query: 227 TKFDRILDAWNVFSS-----------------------------------IARKDITS-- 249
K ++A ++S I RK +
Sbjct: 286 MKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 345
Query: 250 --WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
++ID ++K LD AR VF M+S ++ SW +I+ +A++LFS+M D
Sbjct: 346 LLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDS 405
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGEL 359
L+PD + + L AC+ L +G + + Y P C L +AG++
Sbjct: 406 GLVPDSIAFVTTLAACSHAGLLEEGRSC--FKLMTDHYKITPRLEHLACMVDLLGRAGKV 463
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+ + +P+ + ++GAC ++ ++G
Sbjct: 464 KEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIG------------------------- 498
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVG-YAQFGCGEEALKLFRRMRSSGVRPN--- 475
L +A +LF P+ + L+ YA+ G EE + M+S G++ N
Sbjct: 499 ------LLAADKLFQLA--PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 550
Query: 476 ---------HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
H LVG + + E L + M+ E G +P E
Sbjct: 551 SNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMK-ELGYVPDSE 596
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 166/374 (44%), Gaps = 59/374 (15%)
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNT-----IIAGVASCSNANEAMSLFSEMGDRE 305
G ++D + L RTV + + S +L +N+ ++ AS + A +F E+ +R
Sbjct: 47 GQVLDTYPDLKTLRTVHSRIISEDL-RYNSSLGVKLMRAYASLKDVATARKVFDEIPERN 105
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSL 365
+I + +RS + GFY E ++F
Sbjct: 106 VIIINVMIRSY--------------------VNNGFYR--------------EGIQVFGT 131
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
M + KPDH TF V+ AC+ ++ +G ++H K GL+ +FV NGL+ MY KCG
Sbjct: 132 MCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGF 191
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L AR + + M DVVSW+SL+ GYAQ ++AL++ R M S + + T+ +L A
Sbjct: 192 LSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 251
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV-----VDLLARAGRVHEAEDFINQM-- 538
S+ E + + M + G ++S V + + + EA + + M
Sbjct: 252 VSNT--TTENVMYVKDMFFKMG------KKSLVSWNVMIGVYMKNAMPVEAVELYSGMEA 303
Query: 539 -AFDDDIVVWKSLLASCKTHGNVDVGKRAAENI--LKIDPTNSAALVLLCNIYASSGKWE 595
F+ D V S+L +C + +GK+ I K+ P N L ++YA G +
Sbjct: 304 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLD 362
Query: 596 EVARLMGSMKERGV 609
+ +MK R V
Sbjct: 363 RARDVFENMKSRDV 376
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 299/590 (50%), Gaps = 59/590 (10%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDARMVFDEMPQ 143
LI CSSLR L ++ H H++ + D + + + SLE AR VFDE+PQ
Sbjct: 37 LIDRCSSLRQL---KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQ 93
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQML--QSGLMPDQFTFGSIIRACSGLCCVGLGR 201
N +W +I + +I ++ M+ +S P+++TF +I+A + + + LG+
Sbjct: 94 PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 153
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL- 260
LH IKS GS + N+LI Y + A VF++I KD+ SW SMI+GF +
Sbjct: 154 SLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 213
Query: 261 --DFARTVFNEMESPNLASWNTIIAGVAS--------------CSN------------AN 292
D A +F +MES ++ + + + GV S CS AN
Sbjct: 214 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLAN 273
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+ ++++ G E + L A ++ + Y I + + + V NA+
Sbjct: 274 AMLDMYTKCGSIE------DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMP 327
Query: 353 Q-------------HQAGE----LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+ Q G+ L L L K + IT + ACA + +LE+G
Sbjct: 328 KKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGR 387
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
+H YI K G+ ++ +V + L+ MY KCG L ARE+FN +E DV WS++I G A G
Sbjct: 388 WIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHG 447
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
CG EA+ +F +M+ + V+PN VT V ACSH GLV+E L+ M++ YGI+P +
Sbjct: 448 CGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHY 507
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VD+L R+G + +A FI M VW +LL +CK H N+ + + A +L+++P
Sbjct: 508 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEP 567
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N A VLL NIYA SGKW+ V+ L M+ G++K PG S IEI IH
Sbjct: 568 RNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIH 617
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + + + A EV+++ ++ W+ L S+ + NEAL+ F LQ N ++
Sbjct: 308 DGYAISEDYEAAREVLNAMPKKDIVAWN-ALISAYEQNGKPNEALLVFHELQLQKNIKLN 366
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T +SAC+ + +L+LGR +H +I + + + + + +++MY KCG LE AR VF+
Sbjct: 367 QITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFN 426
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+ +R+V W+AMI G + +G + A++++ +M ++ + P+ TF ++ ACS
Sbjct: 427 SVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACS 479
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 292/519 (56%), Gaps = 21/519 (4%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEM-PQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
D V ++ Y G L DAR +FD +RNVV+WTA+++G ++ G+ + A L+
Sbjct: 65 DVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALF--- 121
Query: 173 LQSGLMPDQ--FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
G MP++ ++ +++ A + VG L + + GS N L+A +
Sbjct: 122 ---GRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGS----WNILLAALVRSG 174
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
I A +F + +++ +W +M+ G ++ ++ AR +F+ M N+ SWN +I+G A
Sbjct: 175 NIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGYAR 234
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+EA LF +M R++ + + + +L + ++ + ++ + +
Sbjct: 235 NHMIDEAHDLFMKMPTRDIASWNIMITGFI----QNKNLERAQELFDKMPRRNVVTWTTM 290
Query: 348 CNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
N LQ Q+ +LF+ ML +P+ +TF + AC+ +A L G Q+H I KT
Sbjct: 291 MNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPF 350
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D F+ + LM++Y KCG + AR++FN ++ DV+SW+ +I YA G G EA+ L+ +
Sbjct: 351 QFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEK 410
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ +G +PN VT VG+L+ACSH GLV+EGL+++ M + I E +C++DL +RAG
Sbjct: 411 MQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAG 470
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ +A+ I+ + + VW +LL C +HGN +G AA N+L+ +P N+ LLCN
Sbjct: 471 RLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCN 530
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
IYAS+GKW+E A++ M +RG++K PG SWIE+ K+H
Sbjct: 531 IYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVH 569
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 200/434 (46%), Gaps = 52/434 (11%)
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEM 270
+H+ N +A R+ DA +F +D+ SW +++ ++ L AR +F+
Sbjct: 33 NHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRP 92
Query: 271 ES-PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS------P 323
++ N+ +W +++G A +EA +LF M +R ++ + ++L A TS
Sbjct: 93 DARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVV----SWNTMLEAYTSSGRVGDA 148
Query: 324 LSLYQGMQIH---------SYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKP- 373
+L+ GM + + +++ G N+ + ++ M+A +
Sbjct: 149 CTLFNGMPVRDAGSWNILLAALVRSG---NIDKARKLFDRMPERNVMAWTTMVAGIARSG 205
Query: 374 ---------DHITFNDVMGACAAM---ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
D + +V+ A + A M + H MK D+ N ++ ++
Sbjct: 206 SVNEARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMP-TRDIASWNIMITGFI 264
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
+ +L A+ELF+ M +VV+W++++ GY Q E AL+LF M G+RPN VT +G
Sbjct: 265 QNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLG 324
Query: 482 VLTACSHVGLVEEGLQLYRIM-QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
+ ACS++ + EG Q+++++ + + E S +++L A+ G + A N ++
Sbjct: 325 AVDACSNLAGLSEGQQVHQMICKTPFQFDTFIE--STLMNLYAKCGEIILARKVFN-LSK 381
Query: 541 DDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
+ D++ W ++A+ HG + + ++ EN K + L+ C + SG +E
Sbjct: 382 EKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSAC---SHSGLVDE 438
Query: 597 VARLMGSM-KERGV 609
R+ M K+R +
Sbjct: 439 GLRIFEYMVKDRSI 452
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 166/371 (44%), Gaps = 47/371 (12%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNE-ALVAFDFLQNNTNFRIRPS--TYA 84
L++A E+ D RR W + L Q++ +E AL F+ + + IRP+ T+
Sbjct: 269 LERAQELFDKMPRRNVVTWTTMMNGYL--QSIQSETALQLFNGMLIDG---IRPNQVTFL 323
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ ACS+L L G++VH I + Q D + + ++N+Y KCG + AR VF+ ++
Sbjct: 324 GAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEK 383
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V+SW MIA + +G AI LY +M ++G P+ T+ ++ ACS V G ++
Sbjct: 384 DVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIF 443
Query: 205 AHVIK-------SEHGSHLISQNALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSMIDG 256
+++K EH LI + ++ R+ DA + + T W +++ G
Sbjct: 444 EYMVKDRSIAVRDEH------YTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGG 497
Query: 257 ------FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
S D A E E N ++ + AS EA + SEM DR L
Sbjct: 498 CNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGL---- 553
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
+ C+ + ++H ++ + +S + N++LQ + +M +
Sbjct: 554 --KKQPGCSWIEVAN-----KVHVFVSRDKSHSESDLINSLLQD-------IHDIMRMAD 599
Query: 371 TKP-DHITFND 380
T P DH D
Sbjct: 600 TVPRDHTQLID 610
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 292/520 (56%), Gaps = 18/520 (3%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEM-PQRNVVSWTAMIAGCSQNGQENAAIELYV 170
+ D V +++ Y + G L DAR +FD +RNVV+WTA+++G ++ G + A L+
Sbjct: 68 ERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEVLFQ 127
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M Q ++ ++ +++ A + G L + + GS N L+AM +
Sbjct: 128 RMPQRNVV----SWNTMLEAYAVAGRAGDACALFDRMPVRDAGS----WNILLAMLVRSG 179
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
+ A +F + +D+ +W +M+DG ++ +D AR +F+ M N+ SWN +I+G
Sbjct: 180 SVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTR 239
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+EA+ LF++M R++ + + + L + ++ + ++ + +
Sbjct: 240 NHRLDEALDLFTKMPHRDIASCNIMITGFI----QNKDLKRARKLFDEMPERNVVTWTTM 295
Query: 348 CNAILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
N L+ + EL LF ML S +P+ +TF + AC+ +A+L G Q+H I KT
Sbjct: 296 MNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAF 355
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+D FV + LM++Y KCG +G AR+LF+ + D++SW+ +I YA G G EA+ L+ +
Sbjct: 356 QVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEK 415
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ +G RPN VT V +L+ACSH GLV+EGL+++ M N+ I E +C++DL +RAG
Sbjct: 416 MQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAG 475
Query: 527 RVHEAEDFINQMAFDD-DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
R+ +A+ I+ + VW +LL C HGN +G AA N+++ +P N+ LL
Sbjct: 476 RLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLS 535
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYAS+GKW+E A + M RG++K PG SWIE+ K+H
Sbjct: 536 NIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVH 575
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
IRP+ T+ + ACS L +L G++VH I + Q D + + ++N+Y KCG + AR
Sbjct: 320 IRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLAR 379
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD +++++SW +IA + +G AI LY +M +G P+ T+ ++ ACS
Sbjct: 380 KLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSG 439
Query: 196 CVGLGRQL-------HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
V G ++ + ++ EH LI + ++ R+ DA + + K +
Sbjct: 440 LVDEGLKIFESMVNDRSIAVRDEH------YTCLIDLCSRAGRLDDAKRLIHYLKIKPAS 493
Query: 249 S--WGSMIDG------FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
W +++ G S + A + E N ++ + AS EA + SE
Sbjct: 494 GSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSE 553
Query: 301 MGDREL 306
M +R L
Sbjct: 554 MNNRGL 559
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH- 120
EA+ ++ +Q N +R TY L+SACS + G K+ + +++ + AV H
Sbjct: 408 EAIHLYEKMQGN-GYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSI--AVRDEHY 464
Query: 121 --ILNMYGKCGSLEDARMVFDEM---PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++++ + G L+DA+ + + P V W+A++ GC+ +G E+ ++Q+
Sbjct: 465 TCLIDLCSRAGRLDDAKRLIHYLKIKPASGSV-WSALLGGCNAHGNESIGNLAARNLIQA 523
Query: 176 GLMPDQ---FTFGSIIRACSG 193
PD +T S I A +G
Sbjct: 524 --EPDNAGTYTLLSNIYASAG 542
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 276/508 (54%), Gaps = 43/508 (8%)
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLI 217
Q + A+EL + ++ P + ++I AC + LGR++HAH S +
Sbjct: 67 QQKRVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVF 123
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMESPN 274
N L+ MY K ++DA +F + +D+ SW +MI G++KL + AR +F+EM +
Sbjct: 124 ISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRD 183
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIP-DGLTVRSLLCACTSPLSLYQGMQIH 333
SWN I+G + + EA+ LF M E + T+ S L A + L G +IH
Sbjct: 184 NFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIH 243
Query: 334 SYIIKKGFYSNVPVCNAILQ------------------------------------HQAG 357
Y+I+ + V +A+L +
Sbjct: 244 GYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRRE 303
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E F LF ++ S +P+ TF V+ ACA A+ +G ++H Y+M G F ++ L+
Sbjct: 304 EGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALV 363
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY KCG+ AR +FN M PD+VSW+SLIVGYAQ G +EAL F + SG +P+ V
Sbjct: 364 HMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQV 423
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VGVL+AC+H GLV++GL+ + ++ ++G++ T + +CV+DLLAR+GR EAE+ I+
Sbjct: 424 TYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDN 483
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M D +W SLL C+ HGN+++ KRAA+ + +I+P N A + L NIYA++G W EV
Sbjct: 484 MPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEV 543
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A + M G+ K PG+SWIEI+ ++H
Sbjct: 544 ANVRKDMDNMGIVKKPGKSWIEIKRQVH 571
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 181/372 (48%), Gaps = 32/372 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L+QA ++ D +R + W+ + S N EAL F +Q + T + +
Sbjct: 169 LEQARKLFDEMPQRDNFSWNAAI-SGYVTHNQPREALELFRVMQRHERSSSNKFTLSSAL 227
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
+A +++ L+LG+++H +++ ++ D V+ + +L++YGKCGSL++AR +FD+M R+VV
Sbjct: 228 AASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVV 287
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SWT MI C ++G+ L+ ++QSG+ P+++TF ++ AC+ LG+++H ++
Sbjct: 288 SWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYM 347
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ + + + +AL+ MY+K A VF+ + + D+ SW S+I G+
Sbjct: 348 MHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGY---------- 397
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
A +EA+ F + PD +T +L ACT +
Sbjct: 398 ------------------AQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVD 439
Query: 328 QGMQ-IHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G++ HS K G C L ++G +++ KPD + ++G
Sbjct: 440 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGG 499
Query: 385 CAAMASLEMGTQ 396
C +LE+ +
Sbjct: 500 CRIHGNLELAKR 511
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 217/522 (41%), Gaps = 105/522 (20%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
LC+Q EA+ L + T+ R Y+ LI+AC R+L+LGR+VH H +S P
Sbjct: 65 LCQQKRVKEAVE----LLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVP 120
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+ N +L+MY KCGSL DA+M+FDEM R++ SW MI G ++ G+ A +L+ +M
Sbjct: 121 GVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMP 180
Query: 174 Q----------SGLMP----------------------DQFTFGSIIRACSGLCCVGLGR 201
Q SG + ++FT S + A + + C+ LG+
Sbjct: 181 QRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGK 240
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++H ++I++E + +AL+ +Y K + +A +F + +D+ SW +MI
Sbjct: 241 EIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMI------- 293
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F + E LF ++ + P+ T +L AC
Sbjct: 294 --HRCFED-------------------GRREEGFLLFRDLMQSGVRPNEYTFAGVLNACA 332
Query: 322 SPLSLYQGMQIHSYIIKKGF-------------YS---NVPVCNAILQH----------- 354
+ + G ++H Y++ G+ YS N V +
Sbjct: 333 DHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTS 392
Query: 355 ---------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKT 404
Q E F L+L S TKPD +T+ V+ AC ++ G + H K
Sbjct: 393 LIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKH 452
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKL 463
GL ++D+ + G A + + M PD W+SL+ G G E A +
Sbjct: 453 GLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRA 512
Query: 464 FRRMRSSGVRP-NHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+ + + P N T + + ++ GL E + + M N
Sbjct: 513 AKALYE--IEPENPATYITLANIYANAGLWSEVANVRKDMDN 552
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 307/583 (52%), Gaps = 44/583 (7%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
+ L+S+C+ ++SL GR++H HI+S + +L ++ Y L DA ++ +
Sbjct: 178 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 237
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ W +I+ +NG A+ Y QM++ G+ PD FT+ S+++AC +G G+++
Sbjct: 238 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 297
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF- 262
H + S LI NALI+MY K ++ A ++F I +D SW SMI ++ +
Sbjct: 298 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 357
Query: 263 --ARTVFNEMESP----NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
A +F M + N+ WNTI G N A+ L S+M D + +
Sbjct: 358 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIG 417
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRLFSL--- 365
L AC+ G +IHS+ I+ F V N+++ A LF+L
Sbjct: 418 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSL 477
Query: 366 -------------------------MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
ML S +P+++T V+ CA +A+L+ G + HCY
Sbjct: 478 ISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCY 537
Query: 401 IMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ + D + + N L+DMY + G + AR +F+ + + D ++++S+I GY G G+
Sbjct: 538 MTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQA 597
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
ALKLF M + ++P+H+T++ VL+ACSH GLV +G L+ M++ YG+ P E +C+
Sbjct: 598 ALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMT 657
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DL RAG +++A++ I M + +W +L+ +C+ H N ++G+ AAE +L++ P N
Sbjct: 658 DLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPG 717
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
VL+ N+YA++G W ++A++ M++ GVRK PG +W+++ T
Sbjct: 718 YYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGT 760
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 197/480 (41%), Gaps = 110/480 (22%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVH 103
W+ L SS + +AL A+ + IRP TY ++ AC L G++VH
Sbjct: 243 WNL-LISSYVRNGFCQKALSAYKQMVKKG---IRPDNFTYPSVLKACGEELDLGFGKEVH 298
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA--------- 154
+ I +S+ + ++HN +++MYGKCG + AR +FD++P+R+ VSW +MI+
Sbjct: 299 ESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWN 358
Query: 155 --------------------------GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G + G A+EL QM + G D +
Sbjct: 359 EAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGL 418
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
ACS + LG+++H+ I+S G +N+LI MY++ + A+ +F + K +
Sbjct: 419 GACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLI 478
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
SW N+II+G + EA L EM + P
Sbjct: 479 SW----------------------------NSIISGCCHMDRSEEASFLLREMLLSGIEP 510
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI---------------- 351
+ +T+ S+L C +L G + H Y+ ++ F ++ + NA+
Sbjct: 511 NYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRV 570
Query: 352 --------------------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+Q + +LF M Q KPDHIT V+ AC+ +
Sbjct: 571 FDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLV 630
Query: 392 EMGTQLHCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPDVVSWSSLI 448
G QL M++ GL + + D++ + G L A+E+ N P W++LI
Sbjct: 631 TQG-QLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLI 689
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 75/314 (23%)
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKG-------------FYS---------------- 343
+ SLL +CT SL +G Q+H +II G FYS
Sbjct: 177 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 236
Query: 344 -------NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
N+ + + + + + M+ +PD+ T+ V+ AC L G +
Sbjct: 237 ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 296
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H I + + + V N L+ MY KCG +G AR+LF+ + + D VSW+S+I YA G
Sbjct: 297 VHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGM 356
Query: 457 GEEALKLF-----------------------------------RRMRSSGVRPNHVTLVG 481
EA +LF +MR G + V L+
Sbjct: 357 WNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALII 416
Query: 482 VLTACSHVGLVEEGLQLYRI-MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
L ACSH+G + G +++ +++ +G + T ++ ++ + +R + A + Q+
Sbjct: 417 GLGACSHIGDAKLGKEIHSFAIRSCFGEVDT--VKNSLITMYSRCKDLKHAY-LLFQLME 473
Query: 541 DDDIVVWKSLLASC 554
++ W S+++ C
Sbjct: 474 AKSLISWNSIISGC 487
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 299/581 (51%), Gaps = 65/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+ C++ L GR VH + + +A+ + NMY KC DAR VFD M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLG 200
P R+ V+W A++AG ++NG A+E+ V+M + G PD T S++ AC+ +
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R+ HA I+S L + ILDA+ I
Sbjct: 181 REAHAFAIRS----------GLEELVNVATAILDAYCKCGDI------------------ 212
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
AR VF+ M + N SWN +I G A ++ EA++LF+ M + + ++V + L AC
Sbjct: 213 RAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQAC 272
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------QHQAGEL--------- 359
L +GM++H +++ G SNV V NA++ H EL
Sbjct: 273 GELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWN 332
Query: 360 ---------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
RLF+ M KPD T V+ A A ++ +H Y ++
Sbjct: 333 AMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRL 392
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L DV+V+ L+DMY KCG + AR LFN + V++W+++I GY G G+ A++LF
Sbjct: 393 HLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELF 452
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M+S G+ PN T + VL+ACSH GLV+EG + + M+ +YG+ P E +VDLL R
Sbjct: 453 EEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGR 512
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG++ EA FI +M D + V+ ++L +CK H NV++ + +A+ I ++ P VLL
Sbjct: 513 AGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLL 572
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA++ W++VAR+ +M++ G++K PG S I+++ +IH
Sbjct: 573 ANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIH 613
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 215/490 (43%), Gaps = 86/490 (17%)
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
AA+ +V M +G P TF S+++ C+ + GR +HA + S ++ AL
Sbjct: 42 AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MY K R DA VF + +D +W +++ G+++ AR EM
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAM-EM------------- 147
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
+ + E G+R PD +T+ S+L AC + +L + H++ I+ G
Sbjct: 148 ----------VVRMQEEEGER---PDSITLVSVLPACANARALAACREAHAFAIRSGLEE 194
Query: 344 NVPVCNAILQ---------------------------------HQAG---ELFRLFSLML 367
V V AIL Q G E LF+ M+
Sbjct: 195 LVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMV 254
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
++ + AC + L+ G ++H +++ GL +V VMN L+ MY KC +
Sbjct: 255 EEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVD 314
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A +F+ ++ VSW+++I+G AQ GC E+A++LF RM+ V+P+ TLV V+ A +
Sbjct: 315 LASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALA 374
Query: 488 HVG--LVEEGLQLYRIM----QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+ L + Y I Q+ Y + + ++D+ A+ GRV+ A N A +
Sbjct: 375 DISDPLQARWIHGYSIRLHLDQDVYVL-------TALIDMYAKCGRVNIARILFNS-ARE 426
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAE-----NILKIDPTNSAALVLLCNIYASSGKWEE 596
++ W +++ +HG GK A E + I P + L +L + + +G +E
Sbjct: 427 RHVITWNAMIHGYGSHG---FGKAAVELFEEMKSIGIVPNETTFLSVL-SACSHAGLVDE 482
Query: 597 VARLMGSMKE 606
SMKE
Sbjct: 483 GREYFTSMKE 492
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M ++ P TF ++ CAA L G +H + G+ + L +MY K
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNHVTLVG 481
C AR +F+ M D V+W++L+ GYA+ G A+++ RM+ G RP+ +TLV
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 482 VLTAC-----------SHVGLVEEGLQLY-----------------RIMQNEYGIIPTRE 513
VL AC +H + GL+ R + + +PT+
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 514 RRS--CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA---SCKTHGNVDVGKRAAE 568
S ++D A+ G EA N+M + V S+LA +C G +D G R E
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286
Query: 569 NILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+++I +N + + L +Y+ + + + + + R
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 305/579 (52%), Gaps = 52/579 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY +IS S RKV + + D + N +L+ Y K G+L AR +F++M
Sbjct: 93 TYNAMISGYLSNNKFDCARKVFEKMPDR----DLISWNVMLSGYVKNGNLSAARALFNQM 148
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+++VVSW AM++G +QNG A +++ QML + ++ ++ ++ A + R
Sbjct: 149 PEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDAR 204
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA--------------WNV--------- 238
+L S+ ++S N L+ Y + R+ DA WN+
Sbjct: 205 RL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260
Query: 239 --------FSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
F + +D+ +W +M+ GF + LD A +F EM N SWN +IAG
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQ 320
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+A LF +M R + + +++ ++ Q + + ++ S +
Sbjct: 321 SQQIEKARELFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376
Query: 348 CNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ Q Q+ E LF M + + +CA +A+LE+G QLH ++K G
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF 436
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
N L+ MY KCGS+ A ++F + + D+VSW+++I GYA+ G G+EAL LF
Sbjct: 437 QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ + ++P+ VTLVGVL+ACSH GLV++G++ + M YGI + +C++DLL RAG
Sbjct: 497 MKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAG 555
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EA + + M F D W +LL + + HG+ ++G++AAE + +++P NS VLL N
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSN 615
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+YA+SG+W EV + M+++GV+KVPG SW+EIQ K H
Sbjct: 616 LYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTH 654
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 229/489 (46%), Gaps = 77/489 (15%)
Query: 96 LQLGRKVHDHILSSKCQP-----------DAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ RK+ ++ +C+ V +N +++ Y + AR VF++MP R
Sbjct: 61 VKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDR 120
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+++SW M++G +NG +AA L+ QM + D ++ +++ + V R++
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNGFVEEARKIF 176
Query: 205 AH-VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKL 260
++K+E IS N L++ Y + RI DA +F S +I SW ++ G+ +L
Sbjct: 177 DQMLVKNE-----ISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRL 231
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
D AR++F+ M + SWN +I G A +EA LF E+ R++ A
Sbjct: 232 DDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF-----------AW 280
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
T+ +S GF V N +L E R+F M + + +++N
Sbjct: 281 TAMVS--------------GF-----VQNGMLD----EATRIFEEM----PEKNEVSWNA 313
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ +E +L + + + N ++ Y +CG++ A+ LF+ M D
Sbjct: 314 MIAGYVQSQQIEKARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRD 369
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY- 499
+SW+++I GYAQ G EEAL LF +M+ G N L L++C+ + +E G QL+
Sbjct: 370 CISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHG 429
Query: 500 RIMQNEY--GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
R+++ + G I + ++ + + G + EA D + + DIV W +++A H
Sbjct: 430 RLVKAGFQTGYIAG----NALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARH 484
Query: 558 GNVDVGKRA 566
G GK A
Sbjct: 485 G---FGKEA 490
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 146/297 (49%), Gaps = 21/297 (7%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
+ C +DQA + D +R D I + S + EAL F ++ + R
Sbjct: 348 GYAQCGNIDQAKILFDEMPQR-DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNR- 405
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S A +S+C+ + +L+LG+++H ++ + Q + N +L MYGKCGS+E+A VF++
Sbjct: 406 SALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED 465
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ ++++VSW MIAG +++G A+ L+ M + + PD T ++ ACS V G
Sbjct: 466 ITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKG 524
Query: 201 RQLHAHVIKSEHGSHLISQNA-----LIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM- 253
+ S + ++ I+ NA +I + + R+ +A N+ S+ D +WG++
Sbjct: 525 MEY----FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580
Query: 254 ----IDGFSKL--DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
I G ++L A VF EME N + + A+ E + S+M D+
Sbjct: 581 GASRIHGDTELGEKAAEKVF-EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D D+V W+ I Y + G E AL +F MR + + G L+
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN-----------N 105
Query: 498 LYRIMQNEYGIIPTRERRSCVVDL--LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ + + +P R+ S V L + G + A NQM + D+V W ++L+
Sbjct: 106 KFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP-EKDVVSWNAMLSGFA 164
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+G V+ ++ + +L N + L + Y +G+ E+ RL S
Sbjct: 165 QNGFVEEARKIFDQML---VKNEISWNGLLSAYVQNGRIEDARRLFDS 209
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 299/581 (51%), Gaps = 65/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+ C++ L GR VH + + +A+ + NMY KC DAR VFD M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLG 200
P R+ V+W A++AG ++NG A+E+ V+M + G PD T S++ AC+ +
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R+ HA I+S L + ILDA+ I
Sbjct: 181 REAHAFAIRS----------GLEELVNVATAILDAYCKCGDIRA---------------- 214
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
AR VF+ M + N SWN +I G A ++ EA++LF+ M + + ++V + L AC
Sbjct: 215 --ARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQAC 272
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------QHQAGEL--------- 359
L +GM++H +++ G SNV V NA++ H EL
Sbjct: 273 GELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWN 332
Query: 360 ---------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
RLF+ M KPD T V+ A A ++ +H Y ++
Sbjct: 333 AMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRL 392
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L DV+V+ L+DMY KCG + AR LFN + V++W+++I GY G G+ A++LF
Sbjct: 393 HLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELF 452
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M+S G+ PN T + VL+ACSH GLV+EG + + M+ +YG+ P E +VDLL R
Sbjct: 453 EEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGR 512
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG++ EA FI +M D + V+ ++L +CK H NV++ + +A+ I ++ P VLL
Sbjct: 513 AGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLL 572
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA++ W++VAR+ +M++ G++K PG S I+++ +IH
Sbjct: 573 ANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIH 613
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 215/490 (43%), Gaps = 86/490 (17%)
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
AA+ +V M +G P TF S+++ C+ + GR +HA + S ++ AL
Sbjct: 42 AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MY K R DA VF + +D +W +++ G+++ AR EM
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAM-EM------------- 147
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
+ + E G+R PD +T+ S+L AC + +L + H++ I+ G
Sbjct: 148 ----------VVRMQEEEGER---PDSITLVSVLPACANARALAACREAHAFAIRSGLEE 194
Query: 344 NVPVCNAILQ---------------------------------HQAG---ELFRLFSLML 367
V V AIL Q G E LF+ M+
Sbjct: 195 LVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMV 254
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
++ + AC + L+ G ++H +++ GL +V VMN L+ MY KC +
Sbjct: 255 EEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVD 314
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A +F+ ++ VSW+++I+G AQ GC E+A++LF RM+ V+P+ TLV V+ A +
Sbjct: 315 LASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALA 374
Query: 488 HVG--LVEEGLQLYRIM----QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+ L + Y I Q+ Y + + ++D+ A+ GRV+ A N A +
Sbjct: 375 DISDPLQARWIHGYSIRLHLDQDVYVL-------TALIDMYAKCGRVNIARILFNS-ARE 426
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAE-----NILKIDPTNSAALVLLCNIYASSGKWEE 596
++ W +++ +HG GK A E + I P + L +L + + +G +E
Sbjct: 427 RHVITWNAMIHGYGSHG---FGKAAVELFEEMKSIGIVPNETTFLSVL-SACSHAGLVDE 482
Query: 597 VARLMGSMKE 606
SMKE
Sbjct: 483 GREYFTSMKE 492
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M ++ P TF ++ CAA L G +H + G+ + L +MY K
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNHVTLVG 481
C AR +F+ M D V+W++L+ GYA+ G A+++ RM+ G RP+ +TLV
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 482 VLTAC-----------SHVGLVEEGLQLY-----------------RIMQNEYGIIPTRE 513
VL AC +H + GL+ R + + +PT+
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 514 RRS--CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA---SCKTHGNVDVGKRAAE 568
S ++D A+ G EA N+M + V S+LA +C G +D G R E
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286
Query: 569 NILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+++I +N + + L +Y+ + + + + + R
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRR 326
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 302/553 (54%), Gaps = 22/553 (3%)
Query: 79 RPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP Y+ L+ A + SL R + D + D+V +N +++ + G + AR
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARH 152
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
FD P+++ VSW M+A +NG+ +E + S D ++ +++
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGR----VEEARGLFNSRTEWDVISWNALMSGYVQWGK 208
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ R+L + G ++S N +++ Y + +++A +F + +D+ +W +++ G
Sbjct: 209 MSEARELFDRMP----GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+++ L+ AR VF+ M N SWN ++A +EA LF+ M R + +
Sbjct: 265 YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA----SW 320
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLASQTK 372
++L L + + + +K S + A Q + E +LF M
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+ F V+ CA +A+LE G QLH +++ G + FV N L+ MY KCG++ AR
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F ME+ DVVSW+++I GYA+ G G+EAL++F MR++ +P+ +TLVGVL ACSH GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E+G+ + M +++G+ E +C++DLL RAGR+ EA D + M F+ D +W +LL
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
+ + H N ++G+ AAE I +++P N+ VLL NIYASSGKW + ++ M+ERGV+KV
Sbjct: 561 ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKV 620
Query: 613 PGQSWIEIQTKIH 625
PG SWIE+Q K+H
Sbjct: 621 PGFSWIEVQNKVH 633
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 309/568 (54%), Gaps = 53/568 (9%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P N +L Y K ++ A +F+ MP+R+VVSW M++ SQ+G+ A+ + V
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ D T+ S + AC+ L +G G+QLHA VI+S +A++ +Y K
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLD-FART--VFNEME----------------- 271
+A VFSS+ ++ SW +I GF + F+ + +FN+M
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404
Query: 272 --------------SPNLASW--------NTIIAGVASCSNANEAMSLFSEMGDRELI-- 307
S +L S N++I+ A C N A S+FS M +R+++
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLM 366
LT S + + GM + I + A +QH A E +++S M
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNA------MLGAYIQHGAEEDGLKMYSAM 518
Query: 367 LASQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
L + PD +T+ + CA M + ++G Q+ + +K GL LD VMN ++ MY KCG
Sbjct: 519 LTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGR 578
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ AR++F+F+ D+VSW+++I GY+Q G G++A+++F M G +P++++ V VL++
Sbjct: 579 ISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSS 638
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
CSH GLV+EG + +++ ++ + P E SC+VDLLARAG + EA++ I++M
Sbjct: 639 CSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAE 698
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
VW +LL++CKTHGN ++ + AA+++ +D +S +LL IYA +GK + A++ M+
Sbjct: 699 VWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMR 758
Query: 606 ERGVRKVPGQSWIEIQTKIHA-SGNDIS 632
++G++K PG SW+E++ K+H D+S
Sbjct: 759 DKGIKKNPGYSWMEVKNKVHVFKAEDVS 786
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 239/535 (44%), Gaps = 89/535 (16%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P+ + HN ++N Y K GSL DA +F MP+R+V SW +++G Q+G+ A+E +V
Sbjct: 92 EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151
Query: 172 MLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M +SG +P+ FTFG +++C L + QL + K ++ M+ +
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
+ A FS I R + SM+ G++K +D A +F M ++ SWN +++ ++
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
A EA+S+ +M +R + D T S L AC SL G Q+H+ +I+ + V
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYV 331
Query: 348 CNAILQHQA------------------------------------GELFRLFSLMLASQT 371
+A+++ A E LF+ M A
Sbjct: 332 ASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELM 391
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
D ++ C+ + + QLH +K+G V + N L+ MY KCG+L +A
Sbjct: 392 TVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAES 451
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
+F+ ME+ D+VSW+ ++ Y+Q G +A + F M + V +T +L A G
Sbjct: 452 IFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNV----ITWNAMLGAYIQHGA 507
Query: 492 VEEGLQLYRIMQNEYGIIP-----TRERRSC----------------------------- 517
E+GL++Y M E +IP R C
Sbjct: 508 EEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMN 567
Query: 518 -VVDLLARAGRVHEAE---DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
V+ + ++ GR+ EA DF+++ D+V W +++ HG +GK+A E
Sbjct: 568 AVITMYSKCGRISEARKIFDFLSR----KDLVSWNAMITGYSQHG---MGKQAIE 615
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 227/481 (47%), Gaps = 56/481 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEAL-VAFDFLQNNTNFRIRPSTYADL 86
+D A E+ +S R W+ + S+L + EAL VA D +N R+ +TY
Sbjct: 244 VDHALELFESMPERDVVSWNM-MVSALSQSGRAREALSVAVDM--HNRGVRLDSTTYTSS 300
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
++AC+ L SL G+++H ++ S D + + ++ +Y KCG ++AR VF + RN
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNT 360
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSWT +I G Q G + ++EL+ QM + DQF +II CS + L RQLH+
Sbjct: 361 VSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSL 420
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFA 263
+KS H ++ N+LI+MY K + +A ++FSS+ +DI SW M+ +S+ + A
Sbjct: 421 SLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKA 480
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTS 322
R F+ M + N+ +WN ++ + + ++S M ++++IPD +T +L C
Sbjct: 481 REFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCAD 540
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------ 352
+ G QI + +K G + V NA++
Sbjct: 541 MGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAM 600
Query: 353 -----QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
QH G + +F ML KPD+I++ V+ +C+ ++ G + + ++K
Sbjct: 601 ITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEG-KFYFDMLKR-- 657
Query: 407 ALDVFVMNGL------MDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEE 459
D V GL +D+ + G+L A+ L + M P W +L+ G E
Sbjct: 658 --DHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNEL 715
Query: 460 A 460
A
Sbjct: 716 A 716
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 157/379 (41%), Gaps = 47/379 (12%)
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF-SSIARKD 246
+R+C + R LH ++ S + QN L+ Y + DA + I +
Sbjct: 35 LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94
Query: 247 ITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-- 301
+ + M++G++KL A +F M ++ SWNT+++G +AM F M
Sbjct: 95 VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154
Query: 302 -GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELF 360
GD +P+ T + +C + +Q+ + K GF + V I+
Sbjct: 155 SGDS--LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIV-------- 204
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
D+ C A ++ ++ I + VF N ++ Y
Sbjct: 205 -------------------DMFVRCGA---VDFASKQFSQIERP----TVFCRNSMLAGY 238
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
K + A ELF M + DVVSW+ ++ +Q G EAL + M + GVR + T
Sbjct: 239 AKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYT 298
Query: 481 GVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
LTAC+ + + G QL+ +++++ I P S +V+L A+ G EA + +
Sbjct: 299 SSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVA--SAMVELYAKCGCFKEARRVFSSLR 356
Query: 540 FDDDIVVWKSLLASCKTHG 558
D + V W L+ +G
Sbjct: 357 -DRNTVSWTVLIGGFLQYG 374
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR--------- 430
D + +C A +L LH ++ GLA VF+ N L+ Y+ CG+L AR
Sbjct: 33 DALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITE 92
Query: 431 -----------------------ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
ELF M DV SW++L+ GY Q G +A++ F M
Sbjct: 93 PNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSM 152
Query: 468 RSSGVR-PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
R SG PN T + +C +G E LQL ++ ++G + + +VD+ R G
Sbjct: 153 RRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLL-TKFGFQGDPDVATGIVDMFVRCG 211
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
V A +Q+ + S+LA VD A E + + + ++ +
Sbjct: 212 AVDFASKQFSQIE-RPTVFCRNSMLAGYAKSYGVD---HALELFESMPERDVVSWNMMVS 267
Query: 587 IYASSGKWEEVARLMGSMKERGVR 610
+ SG+ E + M RGVR
Sbjct: 268 ALSQSGRAREALSVAVDMHNRGVR 291
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 293/555 (52%), Gaps = 56/555 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL---NMYGKCGSLEDARMVF 138
++A++ ++ S L + H HIL S + ++ + ++ A +F
Sbjct: 12 SFAEMATSISELH------QAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIF 65
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+P N W +I + + AA+ ++ QML + ++PD++TF +++C V
Sbjct: 66 SRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVE 125
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GRQ+H HV+K+ G L QN LI +Y I DA ++ + +D+ SW +++ ++
Sbjct: 126 EGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYA 185
Query: 259 K---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+ ++ A +F+EM N+ SWN +I+G EA +F E
Sbjct: 186 ERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGE--------------- 230
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAG---ELFRLFSLMLASQ 370
+P+ NV NA++ AG E+ LF M +
Sbjct: 231 ------TPVK------------------NVVSWNAMITGYSHAGRFSEVLVLFEDMQHAG 266
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
KPD+ T V+ ACA + +L G +H YI K G+++D FV L+DMY KCGS+ A
Sbjct: 267 VKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKAL 326
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
E+FN D+ +W+S+I G + G G+ AL++F M G +PN VT V VL+ACS G
Sbjct: 327 EVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAG 386
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
L++EG +++ +M + +GI PT E C+VDLL R G + EAE+ + +M + VVW+SL
Sbjct: 387 LLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESL 446
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L +C+ HGNV++ +R A+ +L++ P S++ V L N+YAS G+W++V + M+ +GVR
Sbjct: 447 LGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVR 506
Query: 611 KVPGQSWIEIQTKIH 625
K PG S IE+ ++
Sbjct: 507 KDPGCSMIEVDGTVY 521
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 10/157 (6%)
Query: 60 YNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
++E LV F+ +Q+ ++P T ++SAC+ + +L G VH +I + D +
Sbjct: 252 FSEVLVLFEDMQHAG---VKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFV 308
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+++MY KCGS+E A VF+ ++++ +W ++I+G S +G A++++ +ML G
Sbjct: 309 ATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGF 368
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQL-----HAHVIK 209
P++ TF ++ ACS + GR++ H H I+
Sbjct: 369 KPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQ 405
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +++A EV +S LR+ W+ + S L AL F + F+
Sbjct: 314 DMYSKCGSIEKALEVFNSCLRKDISTWN-SIISGLSTHGSGQHALQIFSEMLVE-GFKPN 371
Query: 80 PSTYADLISACSSLRSLQLGRK-----VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
T+ ++SACS L GR+ VH H + QP + ++++ G+ G LE+A
Sbjct: 372 EVTFVCVLSACSRAGLLDEGREMFNLMVHVHGI----QPTIEHYGCMVDLLGRVGLLEEA 427
Query: 135 RMVFDEMPQRNV-VSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ +MPQ+ V W +++ C +G A + ++L+
Sbjct: 428 EELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLE 468
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 280/510 (54%), Gaps = 45/510 (8%)
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
C QN + A V L P + ++I AC + LG+++HAH S
Sbjct: 43 CQQNRLKEA-----VDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPG 97
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMES 272
++ N LI MY K ++DA +F I +KD+ SW +MI G++ +++ AR +F+EM
Sbjct: 98 IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPH 157
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP-DGLTVRSLLCACTSPLSLYQGMQ 331
+ SWN +I+G S EA+ LF M + E + T+ S L A + SL +G +
Sbjct: 158 RDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKE 217
Query: 332 IHSYIIKKGFYSNVPVCNAILQ------------------------------------HQ 355
IH Y+I+ G + V A+L +
Sbjct: 218 IHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGR 277
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
E F LF ++ S +P+ TF V+ ACA +A+ +MG ++H Y+ + G F +
Sbjct: 278 KKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASA 337
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+ +Y KCG+ +AR +FN M PD+VSW+SLIVGYAQ G + AL+ F + SG +P+
Sbjct: 338 LVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPD 397
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
+T VGVL+AC+H GLV+ GL+ + ++ ++G++ T + +CV+DLLAR+GR EAE+ I
Sbjct: 398 EITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENII 457
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWE 595
+ M D +W SLL C+ HGN+++ +RAA+ + +++P N A + L NIYA++G W
Sbjct: 458 DNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWT 517
Query: 596 EVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
E ++ M RG+ K PG+SWIEI+ ++H
Sbjct: 518 EETKVRNDMDNRGIVKKPGKSWIEIKRQVH 547
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 222/522 (42%), Gaps = 74/522 (14%)
Query: 40 RRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLG 99
RRF++I +LF C+QN EA+ D+L + P Y+ LI+AC R L+LG
Sbjct: 33 RRFEEI--IELF---CQQNRLKEAV---DYLHRIP--QPSPRLYSTLIAACLRHRKLELG 82
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
++VH H +S P V+ N +++MY KCGSL DA+M+FDE+PQ+++ SW MI+G +
Sbjct: 83 KRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANV 142
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG--------------------- 198
G+ A +L+ +M D F++ ++I SG G
Sbjct: 143 GRIEQARKLFDEMPHR----DNFSWNAVI---SGYVSQGWYMEALDLFRMMQENESSNCN 195
Query: 199 ------------------LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
G+++H ++I+S + AL+ +Y K + +A +F
Sbjct: 196 MFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFD 255
Query: 241 SIARKDITSWGSMI-----DGFSKLDFA--RTVFNEMESPNLASWNTIIAGVASCSNANE 293
+A KDI SW +MI DG K F+ R + PN ++ ++ A +
Sbjct: 256 QMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQM 315
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
+ M P +L+ + + ++ + + + S + Q
Sbjct: 316 GKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQ 375
Query: 354 H-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVF 411
+ Q + F +L S TKPD ITF V+ AC +++G + H K GL
Sbjct: 376 NGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTAD 435
Query: 412 VMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG---YAQFGCGEEALKLFRRM 467
++D+ + G A + + M PD W+SL+ G + E A K +
Sbjct: 436 HYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFEL 495
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
N T + + ++ GL E ++ M N GI+
Sbjct: 496 EPE----NPATYITLSNIYANAGLWTEETKVRNDMDNR-GIV 532
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 178/372 (47%), Gaps = 32/372 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
++QA ++ D R + W+ + S Q Y EAL F +Q N + T + +
Sbjct: 145 IEQARKLFDEMPHRDNFSWN-AVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSAL 203
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
+A +++ SL+ G+++H +++ S + D V+ +L++YGKCGSL +AR +FD+M +++V
Sbjct: 204 AAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIV 263
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SWT MI C ++G++ L+ ++ SG+ P+++TF ++ AC+ L +G+++H ++
Sbjct: 264 SWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYM 323
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ + + +AL+ +Y+K A VF+ + R D+ SW S+I G+
Sbjct: 324 TRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGY---------- 373
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
A + A+ F + PD +T +L ACT +
Sbjct: 374 ------------------AQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVD 415
Query: 328 QGMQ-IHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
G++ HS K G C L ++G +++ KPD + ++G
Sbjct: 416 IGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGG 475
Query: 385 CAAMASLEMGTQ 396
C ++E+ +
Sbjct: 476 CRIHGNIELAER 487
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 308/602 (51%), Gaps = 99/602 (16%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
+Y L D+ +F+ + ++W ++I + +G + ++ ++ ML SGL PD
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF-------------D 230
F S+++AC+ L + LG LH ++I+ L + NAL+ MY+K
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 231 RILDAWNVFSSIARKDITSWG------SMIDGFS---------------KLDF-ARTVFN 268
++LD + R G S I+ F+ ++D+ R+ +
Sbjct: 171 QVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYR 230
Query: 269 EMESPNLA----------------------------SWNTIIAGVASCSNANEAMSLFSE 300
EME+ NL SWNTIIAG A E +++ E
Sbjct: 231 EMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVRE 290
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--- 357
MG L PD T+ S+L + + +G +IH I++G + V V ++++ A
Sbjct: 291 MGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTR 350
Query: 358 --ELFRLFSL-------------------------------MLASQTKPDHITFNDVMGA 384
+ +R+F+L ML ++ KP +F+ +M A
Sbjct: 351 VVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPA 410
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA + +L +G QLH YI + G ++F+ + L+DMY KCG++ +AR++F+ M D+VSW
Sbjct: 411 CAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSW 470
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+++I+G A G +A++LF +M++ G+ PN+V + VLTACSH GLV+E + + M
Sbjct: 471 TAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTL 530
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
++GI P E + V DLL RAGR+ EA DFI M VW +LL++C+ H NVD+ +
Sbjct: 531 DFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAE 590
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
+ A IL++DP N+ A +LL NIY+++ +W+E A+ S++ G+RK P SWIE++ K+
Sbjct: 591 KVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKV 650
Query: 625 HA 626
+A
Sbjct: 651 YA 652
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 152/313 (48%), Gaps = 24/313 (7%)
Query: 8 ICHLPRWCCEYWDAFELCMLLDQAGEV-----VDSFLRRFDDIWDFDLFS------SLCK 56
I + PR EY + E C L Q ++ VDS + F+ + + DL S +
Sbjct: 221 IDYKPR--SEYRE-MEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNAR 277
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
LY E L + N + T + ++ + + G+++H + +
Sbjct: 278 NGLYGETLTMVREM-GGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVY 336
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
+ + +++MY KC + D+ VF + +R+ +SW ++IAGC QNG + ++ + QML +
Sbjct: 337 VASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAK 396
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+ P ++F SI+ AC+ L + LG+QLH ++ ++ ++ ++L+ MY K I A
Sbjct: 397 IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAR 456
Query: 237 NVFSSIARKDITSWGSMIDGFS----KLDFARTVFNEMES----PNLASWNTIIAGVASC 288
+F + +D+ SW +MI G + LD A +F +M++ PN ++ ++ +
Sbjct: 457 QIFDRMRLRDMVSWTAMIMGCALHGHALD-AIELFEQMKTEGIEPNYVAFMAVLTACSHA 515
Query: 289 SNANEAMSLFSEM 301
+EA F+ M
Sbjct: 516 GLVDEAWKYFNSM 528
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
N ++ ++ S QLH ++K A + ++ L+ +Y L + LFN +
Sbjct: 12 NSLLRNPLSIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHF 70
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
P ++W S+I Y G ++L F M +SG+ P+H VL AC+
Sbjct: 71 PPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 299/610 (49%), Gaps = 83/610 (13%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L +N + S Y L+ C S + +H HI+ + D L + ++ +Y KCG
Sbjct: 63 LAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCG 122
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSII 188
+E A+ VFD M +RN V+WT ++ G QN AI L+ +ML S P +T +
Sbjct: 123 RMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIAL 182
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
AC+ L + LG QLHA++IK NAL ++YTK
Sbjct: 183 NACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCG------------------ 224
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS---LFSEM--GD 303
KL+ T F ++ ++ SW A +++C EAM +F EM +
Sbjct: 225 ---------GKLEVGLTAFRRIKEKDVISWT---AAISACGEKGEAMKGVRVFVEMLLDE 272
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------- 352
++ P+ T+ S L C L G+Q+H+ K G+ SN+ V N++L
Sbjct: 273 VQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVE 332
Query: 353 -----------------------------------QHQAG-ELFRLFSLMLASQTKPDHI 376
+Q G E LFS + S KPD
Sbjct: 333 AQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPF 392
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
TF+ V+ C+ M +LE G Q+H +KTG DV V + +++MY KCGS+ A ++F M
Sbjct: 393 TFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEM 452
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
++ W+++I G+AQ G ++AL LF M+ G+RPN VT VGVL+AC G+V E
Sbjct: 453 SIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAF 512
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ IMQ EY I P + C+VD+L R G+V EA D I +M + +W +L+ C +
Sbjct: 513 NYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLS 572
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
GN+++G AAE +L + P ++ LL N Y S+G++++V+R+ M+E + ++ S
Sbjct: 573 QGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWS 632
Query: 617 WIEIQTKIHA 626
WI I+ ++++
Sbjct: 633 WISIKDRVYS 642
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
FSL S + D + ++ C S +HC+I+KTG D F+ + L+ +Y K
Sbjct: 61 FSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAK 120
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVG 481
CG + A+++F+ M + V+W++L+ GY Q + A+ LF M S P++ TL
Sbjct: 121 CGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAI 180
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
L AC+ + ++ G QL+ + +Y + + + L + G E + +
Sbjct: 181 ALNACTSLHSLKLGEQLHAYII-KYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKE 239
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENIL----KIDP---TNSAALVLLCNI 587
D++ W + +++C G G R +L ++ P T ++AL C +
Sbjct: 240 KDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEV 292
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 196/597 (32%), Positives = 307/597 (51%), Gaps = 84/597 (14%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+ V N +++ Y K G+L +AR +FD M +R V+WT +I G SQ Q A EL+VQM
Sbjct: 77 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ G PD TF +++ C+G Q+ +IK + S LI N L+ Y K +R+
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 196
Query: 234 DAWNVFSSIARKDITSWGS-----------------------------------MIDGFS 258
A +F + D ++ + ++D +S
Sbjct: 197 LACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYS 256
Query: 259 KLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG----DRELIPDGL 311
K D AR +F+EM + S+N II+G A A LF E+ DR+ P
Sbjct: 257 KHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFP--- 313
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------L 352
++L ++ L G QIH+ I S + V N++ L
Sbjct: 314 -FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNL 372
Query: 353 QHQAG-----------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
H++ E +LF+ M + D TF ++ A A++ASL +G
Sbjct: 373 THRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGK 432
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
QLH +I+K+G +VF + L+D+Y KCGS+ A + F M D ++VSW+++I YAQ G
Sbjct: 433 QLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNG 492
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
E LK F+ M SG++P+ V+ +GVL+ACSH GLVEEGL + M Y + P RE
Sbjct: 493 EAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY 552
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+ VVD+L R+GR +EAE + +M D D ++W S+L +C+ H N ++ +RAA+ + ++
Sbjct: 553 ASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEE 612
Query: 576 TNSAA-LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGND 630
AA V + NIYA++G+WE V+++ +M++RGV+K+P SW+EI+ + H S ND
Sbjct: 613 LRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSAND 669
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 31/128 (24%)
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS------- 443
L + + I+KTG D N + ++K G L AR+LF M + VS
Sbjct: 28 LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 87
Query: 444 ------------------------WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
W+ LI GY+Q +EA +LF +M+ G P++VT
Sbjct: 88 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147
Query: 480 VGVLTACS 487
V +L+ C+
Sbjct: 148 VTLLSGCN 155
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 271/533 (50%), Gaps = 67/533 (12%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
GSL AR+VF+++P + ++I G + AI Y M+ GL PD+FTF S+
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 147
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
++C LC G+QLH H K S QN L+ MY+
Sbjct: 148 KSCGVLC---EGKQLHCHSTKLGFASDAYIQNTLMNMYS--------------------- 183
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+ G ++ AR VF++M + ++ SW T+I A +EA+ LF M + P
Sbjct: 184 NCGCLVS-------ARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKP 236
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG---------------------------- 340
+ +T+ ++L AC L Q+H YI + G
Sbjct: 237 NEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLF 296
Query: 341 --------FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
F N+ + + E LF+ M S K D +T ++ AC + +LE
Sbjct: 297 NKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALE 356
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G LH YI K + +DV + L+DMY KCGS+ SA +F M + DV++W++LIVG A
Sbjct: 357 LGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLA 416
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G G +AL+LF M+ S V+P+ +T VGVL ACSH GLV EG+ + M N+YGI P+
Sbjct: 417 MCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSI 476
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E C+VD+L RAGR+ EAED I M D V LL++C+ HGN+ V +RAA+ +++
Sbjct: 477 EHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIE 536
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+DP N VLL NIY+S WE ++ M ER ++K PG S IE+ +H
Sbjct: 537 LDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVH 589
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 175/510 (34%), Positives = 278/510 (54%), Gaps = 45/510 (8%)
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
C QN + A +Q+L P + ++I++C + G+++H H+ S
Sbjct: 50 CQQNRLKEA-----LQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPG 104
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMES 272
L N L+ MY K D ++D+ +F + +D+ SW +I G++K+ A+++F++M
Sbjct: 105 LFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPE 164
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLCACTSPLSLYQGMQ 331
+ SW +I+G NEA+ LF M + + TV S L A + L G +
Sbjct: 165 RDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKE 224
Query: 332 IHSYIIKKGFYSNVPV----------CNAILQ-----------------------HQAG- 357
IH YI++ G S+ V C +I + Q G
Sbjct: 225 IHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGR 284
Query: 358 --ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
E F LF+ +L S +P+ TF+ V+ ACA S E+G ++H Y+ + G F +
Sbjct: 285 RKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASA 344
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+ MY KCG++ SA +F PD+ SW+SLI GYAQ G +EA++ F + SG +P+
Sbjct: 345 LVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPD 404
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
H+T VGVL+AC+H GLV++GL + ++ +YG+ T + +C++DLLAR+G+ EAE+ I
Sbjct: 405 HITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENII 464
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWE 595
++M+ D +W SLL C+ HGN+ + +RAAE + +I+P N A V L NIYA++G W
Sbjct: 465 SKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWS 524
Query: 596 EVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
EVA++ +M +RGV K PG SWI I+ +H
Sbjct: 525 EVAKIRKTMDDRGVVKKPGLSWIAIKRDVH 554
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 226/543 (41%), Gaps = 116/543 (21%)
Query: 40 RRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLG 99
+RFD+ LC+QN EAL + + S Y+ LI +C R LQ G
Sbjct: 40 KRFDEA-----IHILCQQNRLKEALQILHQIDKPS-----ASVYSTLIQSCIKSRLLQQG 89
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV------------- 146
+KVH HI S P + N +L MY KC SL D++ +FDEMP+R++
Sbjct: 90 KKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKM 149
Query: 147 ------------------VSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSI 187
SWTAMI+G ++ + N A+EL+ M +S ++FT S
Sbjct: 150 GLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSA 209
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+ A + + C+ +G+++H +++++ S + +AL MY K I +A ++F + +DI
Sbjct: 210 LAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDI 269
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+W +MID + F + E LF+++ +
Sbjct: 270 VTWTAMIDRY---------FQD-------------------GRRKEGFDLFADLLRSGIR 301
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------------------- 341
P+ T +L AC + S G ++H Y+ + GF
Sbjct: 302 PNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERV 361
Query: 342 YSNVP----------VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ P + Q E R F L++ S T+PDHITF V+ ACA +
Sbjct: 362 FKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLV 421
Query: 392 EMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIV 449
+ G H + GL ++D+ + G A + + M PD W+SL+
Sbjct: 422 DKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLG 481
Query: 450 GYAQFGCGEEALKLFRRMRSS--GVRP-NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
G G LKL +R + + P N T V + + G+ E ++ + M ++
Sbjct: 482 GCRIHG----NLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTM-DDR 536
Query: 507 GII 509
G++
Sbjct: 537 GVV 539
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 211/468 (45%), Gaps = 49/468 (10%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
LL +A + D R + W + S + + NEAL F ++ + N + T +
Sbjct: 151 LLQEAKSLFDKMPERDNFSWT-AMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSA 209
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
++A +++ L++G+++H +I+ + D V+ + + +MYGKCGS+E+AR +FD+M R++
Sbjct: 210 LAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDI 269
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
V+WTAMI Q+G+ +L+ +L+SG+ P++FTF ++ AC+ LG+++H +
Sbjct: 270 VTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGY 329
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+ + + +AL+ MY+K ++ A VF + D+ SW S+
Sbjct: 330 MTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSL------------- 376
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
IAG A +EA+ F + PD +T +L AC +
Sbjct: 377 ---------------IAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLV 421
Query: 327 YQGMQ-IHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+G+ HS + G C L ++G+ +++ KPD + ++G
Sbjct: 422 DKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLG 481
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV- 442
C +L++ + + + + L ++Y G ++ M+D VV
Sbjct: 482 GCRIHGNLKLAQRAAEALFEIEPENPATYVT-LANIYATAGMWSEVAKIRKTMDDRGVVK 540
Query: 443 ----SWSSLIVGYAQFGCGEEAL-----------KLFRRMRSSGVRPN 475
SW ++ F G+++ KL +RM+ G P+
Sbjct: 541 KPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPD 588
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 304/565 (53%), Gaps = 18/565 (3%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
D+L R+ + L+ +C + + + ++ I+++ Q + + ++ +
Sbjct: 26 DYLAPKPPHRLLEERFISLLQSCKTSKQVH---QIQAQIIANGFQYNEYITPKLVTICAT 82
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI 187
+ AR +FD++P N+ W +M G +Q+ + L+ QM + P+ FTF +
Sbjct: 83 LKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVV 142
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+++C + + G Q+H +IK + LI MY+ + DA+ +F + +++
Sbjct: 143 LKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNV 202
Query: 248 TSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+W SMI+G+ + L AR +F+ ++ WN +++G + EA LF EM +R
Sbjct: 203 VAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNR 262
Query: 305 EL-----IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
++ + G + A I S+ G Y++ N + G
Sbjct: 263 DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAH----NGLFFEVLGSF 318
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
R+ S S P+ T V+ ACA + +L++G +H Y +GL +V+V N LMDM
Sbjct: 319 KRMLS---ESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDM 375
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KCG + +A +F M+ D++SW++LI G A G +AL LF +M+++G +P+ +T
Sbjct: 376 YAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITF 435
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+G+L AC+H+GLVE+G ++ M ++Y I+P E C+VD+LARAGR+ +A F+ +M
Sbjct: 436 IGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMP 495
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ D V+W LL +C+ + NV++ + A + +++++P N A V+L NIY +G+WE+VAR
Sbjct: 496 VEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVAR 555
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKI 624
L +M++ G +K+PG S IE+ +
Sbjct: 556 LKVAMRDTGFKKLPGCSLIEVNDAV 580
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L L+ E L +F + + ++ +T ++SAC+ L +L LG+ VH + SS
Sbjct: 301 LIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESS 360
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + + N +++MY KCG +E+A VF M ++++SW +I G + + + A+ L+
Sbjct: 361 GLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLF 420
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCV 197
QM +G PD TF I+ AC+ + V
Sbjct: 421 FQMKNAGQKPDGITFIGILCACTHMGLV 448
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 302/553 (54%), Gaps = 22/553 (3%)
Query: 79 RPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP Y+ L+ A + SL R + D + D+V +N +++ + G + AR
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARH 152
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
FD P+++ VSW M+A +NG+ +E + S D ++ +++
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGR----VEEARGLFNSRTEWDVISWNALMSGYVQWGK 208
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ R+L + G ++S N +++ Y + +++A +F + +D+ +W +++ G
Sbjct: 209 MSEARELFDRMP----GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG 264
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+++ L+ AR VF+ M N SWN ++A +EA LF+ M R + +
Sbjct: 265 YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA----SW 320
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLASQTK 372
++L L + + + +K S + A Q + E +LF M
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+ F V+ CA +A+LE G QLH +++ G + FV N L+ MY KCG++ AR
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F ME+ DVVSW+++I GYA+ G G+EAL++F MR++ +P+ +TLVGVL ACSH GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E+G+ + M +++G+ E +C++DLL RAGR+ EA D + M F+ D +W +LL
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
+ + H N ++G+ AAE I +++P N+ VLL NIYASSGKW + ++ M+ERGV+KV
Sbjct: 561 ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKV 620
Query: 613 PGQSWIEIQTKIH 625
PG SWIE+Q K+H
Sbjct: 621 PGFSWIEVQNKVH 633
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 189/599 (31%), Positives = 312/599 (52%), Gaps = 73/599 (12%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D N +RP+ TY ++ AC+ LR+++ G+ +H H+ S D + +++
Sbjct: 87 ALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMYVCTALVD 146
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQF 182
Y KCG L+ A VFDEMP+R++V+W AMI+G S + I L++ M +S L P+
Sbjct: 147 FYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLS 206
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T + A + G+ +H + + + L+ + ++ +Y K I+ A VF S
Sbjct: 207 TIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSD 266
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM- 301
+K+ +W +MI G+ V NEM EA +F +M
Sbjct: 267 FKKNEVTWSAMIGGY--------VENEM--------------------IKEAGEVFLQML 298
Query: 302 --GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----- 354
D ++ + + +L C L G +H Y IK GF ++ V N ++
Sbjct: 299 VNADMAMVTP-VAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYG 357
Query: 355 -------------------------------QAGELFRLFSLMLASQTKPDHITFNDVMG 383
+A E FRLF M +S +PD T ++
Sbjct: 358 SLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILT 417
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
AC+ +A+L G+ H Y + G A++ + N LMDMY KCG L A+ +F+ M D+VS
Sbjct: 418 ACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVS 477
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM- 502
W++++ G+ G G+EAL LF M+ +GV P+ VTL+ +L+ACSH GLV+EG QL+ M
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ ++ +IP + +C+ DLLARAG + EA DF+N+M F+ DI V +LL++C T+ NV++
Sbjct: 538 RGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVEL 597
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
G ++ + + T + +LVLL N Y+++ +WE+ A++ + K+ G+ K PG SW+++
Sbjct: 598 GNEVSKKMQSLGET-TESLVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVDVD 655
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 176/388 (45%), Gaps = 34/388 (8%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A V DS ++ + W + + + + V L N + P ++ C
Sbjct: 259 ARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVAIGLILMGC 318
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
+ L GR VH + + + D + N +++ Y K GSL DA F E+ +++VS+
Sbjct: 319 ARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYN 378
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
++I+GC +N + + L+ QM SG+ PD T I+ ACS L +G G H + + +
Sbjct: 379 SLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVN 438
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
+ + NAL+ MYTK ++ A VF ++ ++DI SW +M+ GF
Sbjct: 439 GYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFG------------ 486
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
I G+ EA+SLF+ M D + PD +T+ ++L AC+ + +G
Sbjct: 487 -----------IHGL-----GKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGK 530
Query: 331 QIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
Q+ + + +G ++ +P C L +AG L + + +PD ++ AC
Sbjct: 531 QLFNS-MSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSAC 589
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVM 413
++E+G ++ + G + V+
Sbjct: 590 WTYKNVELGNEVSKKMQSLGETTESLVL 617
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 286/535 (53%), Gaps = 68/535 (12%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIR 189
LE AR VFD+M ++NVV+WT MI +Q G + AI+L+++ML SG +PD+FT +I
Sbjct: 211 LESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLIS 270
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
C+ + + LG++LH+ VI+S L +L+ MY K + +A
Sbjct: 271 VCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEA-------------- 316
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA--NEAMSLFSEMG-DREL 306
R VF+ M N+ SW ++ G EAM +FS M +
Sbjct: 317 --------------RKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGV 362
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGE 358
P+ T +L AC S G Q+H IK G + V N ++ A +
Sbjct: 363 APNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARK 422
Query: 359 LFR-LFSLMLASQTKPDH---------------------------ITFNDVMGACAAMAS 390
F LF L S+T D T+ ++ A + +
Sbjct: 423 CFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGT 482
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
+ G Q+H ++K G D+ V N L+ MY KCG+ +A ++FN MED +V++W+S+I G
Sbjct: 483 IGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIING 542
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
+A+ G +AL+LF M +GV+PN VT + VL+ACSHVGL++E + + M++ +GI+P
Sbjct: 543 FAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVP 602
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
E +C+VDLL R+G + EA +FIN M FD D +VW++ L SC+ H N +G+ AA+ I
Sbjct: 603 RMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMI 662
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L+ +P + A +LL N+YA+ G+WE+VA + +MK++ + K G SWIE++ ++H
Sbjct: 663 LEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVH 717
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/550 (23%), Positives = 243/550 (44%), Gaps = 87/550 (15%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
++A+ + + + T + L+ C ++ LG+ +H + +S D +L N
Sbjct: 33 HKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNS 92
Query: 121 ILNMYGKCGSLEDARMVFDEM--PQRNVVSWTAMIAGCSQNGQENAAIELYVQ-MLQSGL 177
++ +Y K A +F M +R+VVS++++I+ + N A+E++ Q +LQ G+
Sbjct: 93 LITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGV 152
Query: 178 MPDQFTFGSIIRAC-------SGLCCVGLGRQLHAHVIKSEH-GSHLISQNALIAMYTKF 229
P+++ F ++IRAC +GLC G V+K+ + SH+ LI M+ K
Sbjct: 153 YPNEYCFTAVIRACLKGGFFKTGLCLFGF-------VLKTGYFDSHVCVGCELIDMFVKG 205
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ D L+ AR VF++M N+ +W +I +A
Sbjct: 206 CSLAD-------------------------LESARKVFDKMREKNVVTWTLMITRLAQYG 240
Query: 290 NANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV- 347
+EA+ LF EM +PD T+ L+ C L G ++HS++I+ G ++ V
Sbjct: 241 YNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVG 300
Query: 348 CNAI-------LQHQAGELF------------------------------RLFS-LMLAS 369
C+ + L +A ++F R+FS ++L
Sbjct: 301 CSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQG 360
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
P+ TF+ V+ ACA++ + G Q+H +K GL+ V NGL+ +Y K G + SA
Sbjct: 361 GVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESA 420
Query: 430 RELFNFMEDPDVVSWSSL-IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
R+ F+ + + ++VS + + F E L R + G + T +L+ +
Sbjct: 421 RKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ-DLDREVEYVGSGVSSFTYASLLSGAAC 479
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+G + +G Q++ M + G + ++ + ++ G A N M D +++ W
Sbjct: 480 IGTIGKGEQIH-AMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDME-DCNVITWT 537
Query: 549 SLLASCKTHG 558
S++ HG
Sbjct: 538 SIINGFAKHG 547
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TYA L+S + + ++ G ++H ++ + D ++N +++MY KCG+ E A VF++M
Sbjct: 469 TYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDM 528
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
NV++WT++I G +++G + A+EL+ ML++G+ P+ T+ +++ ACS VGL
Sbjct: 529 EDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSH---VGLID 585
Query: 202 QLHAHV--IKSEHG 213
+ H ++ HG
Sbjct: 586 EAWKHFTSMRDNHG 599
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 304/579 (52%), Gaps = 52/579 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY +IS S RKV + + D + N +L+ Y K G+L AR +F++M
Sbjct: 93 TYNAMISGYLSNNKFDCARKVFEKMPDR----DLISWNVMLSGYVKNGNLSAARALFNQM 148
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+++VVSW AM++G +QNG A +++ QML + ++ ++ ++ A + R
Sbjct: 149 PEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDAR 204
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA--------------WNV--------- 238
+L S+ ++S N L+ Y + R+ DA WN+
Sbjct: 205 RL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260
Query: 239 --------FSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
F + +D+ +W +M+ GF + LD A +F EM N SWN +IAG
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQ 320
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+A LF +M R + + +++ ++ Q + + ++ S +
Sbjct: 321 SQQIEKARELFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376
Query: 348 CNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ Q Q+ E LF M + + +CA +A+LE+G QLH ++K G
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF 436
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
N L+ MY KCGS+ A ++F + + D+VSW+++I GYA+ G G+EAL LF
Sbjct: 437 QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ + ++P+ VTLVGVL+ACSH G V++G++ + M YGI + +C++DLL RAG
Sbjct: 497 MKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAG 555
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EA + + M F D W +LL + + HG+ ++G++AAE + +++P NS VLL N
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSN 615
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+YA+SG+W EV + M+++GV+KVPG SW+EIQ K H
Sbjct: 616 LYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTH 654
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 229/489 (46%), Gaps = 77/489 (15%)
Query: 96 LQLGRKVHDHILSSKCQP-----------DAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ RK+ ++ +C+ V +N +++ Y + AR VF++MP R
Sbjct: 61 VKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDR 120
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+++SW M++G +NG +AA L+ QM + D ++ +++ + V R++
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNGFVEEARKIF 176
Query: 205 AH-VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKL 260
++K+E IS N L++ Y + RI DA +F S +I SW ++ G+ +L
Sbjct: 177 DQMLVKNE-----ISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRL 231
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
D AR++F+ M + SWN +I G A +EA LF E+ R++ A
Sbjct: 232 DDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF-----------AW 280
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
T+ +S GF V N +L E R+F M + + +++N
Sbjct: 281 TAMVS--------------GF-----VQNGMLD----EATRIFEEM----PEKNEVSWNA 313
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ +E +L + + + N ++ Y +CG++ A+ LF+ M D
Sbjct: 314 MIAGYVQSQQIEKARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRD 369
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY- 499
+SW+++I GYAQ G EEAL LF +M+ G N L L++C+ + +E G QL+
Sbjct: 370 CISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHG 429
Query: 500 RIMQNEY--GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
R+++ + G I + ++ + + G + EA D + + DIV W +++A H
Sbjct: 430 RLVKAGFQTGYIAG----NALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARH 484
Query: 558 GNVDVGKRA 566
G GK A
Sbjct: 485 G---FGKEA 490
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 146/297 (49%), Gaps = 21/297 (7%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
+ C +DQA + D +R D I + S + EAL F ++ + R
Sbjct: 348 GYAQCGNIDQAKILFDEMPQR-DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNR- 405
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S A +S+C+ + +L+LG+++H ++ + Q + N +L MYGKCGS+E+A VF++
Sbjct: 406 SALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED 465
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ ++++VSW MIAG +++G A+ L+ M + + PD T ++ ACS V G
Sbjct: 466 ITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKG 524
Query: 201 RQLHAHVIKSEHGSHLISQNA-----LIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM- 253
+ S + ++ I+ NA +I + + R+ +A N+ S+ D +WG++
Sbjct: 525 MEY----FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580
Query: 254 ----IDGFSKL--DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
I G ++L A VF EME N + + A+ E + S+M D+
Sbjct: 581 GASRIHGDTELGEKAAEKVF-EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D D+V W+ I Y + G E AL +F MR + + G L+
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN-----------N 105
Query: 498 LYRIMQNEYGIIPTRERRSCVVDL--LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ + + +P R+ S V L + G + A NQM + D+V W ++L+
Sbjct: 106 KFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP-EKDVVSWNAMLSGFA 164
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+G V+ ++ + +L N + L + Y +G+ E+ RL S
Sbjct: 165 QNGFVEEARKIFDQML---VKNEISWNGLLSAYVQNGRIEDARRLFDS 209
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 298/558 (53%), Gaps = 40/558 (7%)
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
N+ R P +YA LI + RSLQ G+K+H + ++ ++ ++++ +Y CG L
Sbjct: 21 NHHFLRSEPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQL 80
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM--LQSGLMPDQFTFGSIIR 189
AR +FD++PQ N+ W A+IA C++ G + A+E++ +M L F S+++
Sbjct: 81 SIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLK 140
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
AC + G Q+H V+K +ALI MY+K + DA VF + KD+ +
Sbjct: 141 ACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVA 200
Query: 250 WGSMIDGFSKLDFARTVFNEMES-------PNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+++ G+++ + +E+ PN+ +WN +I+G A + +F M
Sbjct: 201 MNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMN 260
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL 362
+ + PD ++ S+L GF N + E F
Sbjct: 261 EDRVEPDVVSWTSVL---------------------SGFVQNF---------RNEEAFDA 290
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F ML P T + ++ ACA A + G ++H Y + G+ D++V + L+DMY K
Sbjct: 291 FKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAK 350
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV-RPNHVTLVG 481
CG + AR LF M + + V+ +S+I GYA GC EEA++LF +M GV + +H+T
Sbjct: 351 CGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTA 410
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
LTACSHVG +E G +L++IMQ +Y I P E +C+VDL RAG++ EA I M
Sbjct: 411 ALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVK 470
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D+ VW +LLA+C+ HG+V++ + AA+++ +++P ++ +LL ++YA +G W +V R+
Sbjct: 471 PDLFVWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIK 530
Query: 602 GSMKERGVRKVPGQSWIE 619
+K+ +RK+ G SWI+
Sbjct: 531 RRIKKGKLRKLQGLSWID 548
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNH 120
EA+ F+ ++ ++ T+ ++ACS + ++LG+++ + C +P +
Sbjct: 387 EAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYAC 446
Query: 121 ILNMYGKCGSLEDARMVFDEMPQR-NVVSWTAMIAGCSQNGQ----ENAAIELYV----- 170
+++++G+ G LE+A + MP + ++ W A++A C +G E AA L
Sbjct: 447 MVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRNHGHVELAEVAAKHLSELEPES 506
Query: 171 ---QMLQSGLMPDQFTFGSIIR 189
++L S L D T+G + R
Sbjct: 507 AGNRLLLSSLYADAGTWGKVER 528
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 198/641 (30%), Positives = 327/641 (51%), Gaps = 74/641 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ + C +D A +V +S R +W+ + + L E + F ++ + +
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWN-AMLGGFAQNGLAQEVMEFFSCMKRHGP---Q 407
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T+ + SAC+SL L G ++H ++ +K + + N +++MY K G+L++AR
Sbjct: 408 PDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQ 467
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F+ M + VSW A+I G Q + A ++ +M+ +G++PD+ + SI+ AC+ + +
Sbjct: 468 FELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQEL 527
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+Q H ++K + + ++LI MY K +L A
Sbjct: 528 KRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA---------------------- 565
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
R VF M S N+ S N +IAG + + EA+ LF E+ L P +T LL
Sbjct: 566 ------RDVFYSMPSRNVVSVNALIAGY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLL 618
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVP-VCNAIL------------------------ 352
C L G QIH ++K GF S+ VC ++L
Sbjct: 619 DGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKG 678
Query: 353 -------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q+ + + + M + PD F V+ ACA M+SL+ G ++H
Sbjct: 679 LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHS 738
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGE 458
I TG +D + L+DMY KCG + + ++F M +V+SW+S+IVG A+ G E
Sbjct: 739 LIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAE 798
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EAL++F++M + P+ VT +GVL+ACSH G V EG +++ +M N Y ++P + C+
Sbjct: 799 EALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCM 858
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VD+L R G ++EAE+FIN++ D ++W +LL +C+ HG+ GKRAA+ ++++ P +S
Sbjct: 859 VDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSS 918
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
++ VLL +IYA S W L MK +GV+K+PG SWIE
Sbjct: 919 SSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 249/534 (46%), Gaps = 76/534 (14%)
Query: 93 LRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM 152
L++L + +H L +L N I+++Y KCG+++ A+ F + +++V +W ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
++ +G ++ +V M + P++FTF ++ ACSGL V GRQ+H V K+
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---------- 262
G Q LI MY K + DA VF D SW ++I G+ + F
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233
Query: 263 ----------------------------ARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
AR +F ++ +PN+ +WN +I+G A A EA
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEA 293
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+S F E+ L ++ S+L A S L G +H+ K+G NV V +A++
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNM 353
Query: 355 QAG------------------------------------ELFRLFSLMLASQTKPDHITF 378
A E+ FS M +PD TF
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTF 413
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ ACA++ L G QLH ++K A ++FV N L+DMY K G+L AR+ F M+
Sbjct: 414 TSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKI 473
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D VSW+++IVGY Q +EA +FRRM S+GV P+ V+L +++AC++V ++ G Q
Sbjct: 474 HDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQC 533
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ ++ + G+ + S ++D+ + G V A D M ++V +L+A
Sbjct: 534 HCLLV-KVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP-SRNVVSVNALIA 585
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 269/558 (48%), Gaps = 85/558 (15%)
Query: 75 NFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N +RP+ T+A ++SACS L+ + GR+VH + + + +++MY KC L
Sbjct: 135 NHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLR 194
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
DAR+VFD + VSWTA+IAG ++G A++++ +M + G PDQ T +++ A
Sbjct: 195 DARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYV 254
Query: 193 GLCCVGLGRQLHA----------HVIKSEHGSHLISQNALIAMYTKFDRI-LDA-----W 236
L + R+L +V+ S H ++ A I+ + + + L A
Sbjct: 255 ALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEA-ISFFLELKKTGLKATRSSLG 313
Query: 237 NVFSSIARKDITSWGSMI------DGF-----------------SKLDFARTVFNEMESP 273
+V S+IA + ++GSM+ +G SK+D A+ VFN +
Sbjct: 314 SVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER 373
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
N+ WN ++ G A A E M FS M PD T S+ AC S L G Q+H
Sbjct: 374 NIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLH 433
Query: 334 SYIIKKGFYSNVPVCNAILQHQAG------------------------------------ 357
+ +IK F SN+ V NA++ A
Sbjct: 434 TVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYND 493
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E F +F M+++ PD ++ ++ ACA + L+ G Q HC ++K GL + L+
Sbjct: 494 EAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLI 553
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
DMYVKCG + +AR++F M +VVS ++LI GY G EEA+ LF+ ++ G++P V
Sbjct: 554 DMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTEV 612
Query: 478 TLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV--VDLLARAGRVHEAEDF 534
T G+L C ++ G Q++ ++M+ +G + + E CV + L + R ++E
Sbjct: 613 TFAGLLDGCDGAFMLNLGRQIHGQVMK--WGFLSSSE-MVCVSLLCLYMNSQRFVDSETL 669
Query: 535 INQMAFDDDIVVWKSLLA 552
+++ + +VVW +L++
Sbjct: 670 FSELQYPKGLVVWTALIS 687
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 249/546 (45%), Gaps = 67/546 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S K+ EA+ F L+ T + S+ ++SA +SL L G VH
Sbjct: 280 MISGHAKRGFAEEAISFFLELKK-TGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKE 338
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + + ++NMY KC ++ A+ VF+ + +RN+V W AM+ G +QNG +E +
Sbjct: 339 GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFF 398
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M + G PD+FTF SI AC+ L + G QLH +IK++ S+L NAL+ MY K
Sbjct: 399 SCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKS 458
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ +A F + D SW ++I G+ + ++
Sbjct: 459 GALKEARKQFELMKIHDNVSWNAIIVGYVQEEY--------------------------- 491
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG--------- 340
+EA +F M ++PD +++ S++ AC + L +G Q H ++K G
Sbjct: 492 -NDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550
Query: 341 ------------------FYS----NVPVCNAILQ-HQAGEL---FRLFSLMLASQTKPD 374
FYS NV NA++ + G L LF + KP
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLKPT 610
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLGSARELF 433
+TF ++ C L +G Q+H +MK G L+ V L+ +Y+ + LF
Sbjct: 611 EVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLF 670
Query: 434 NFMEDPD-VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
+ ++ P +V W++LI GYAQ E+AL+ ++ MRS + P+ VL AC+ + +
Sbjct: 671 SELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSL 730
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ G +++ ++ + G S ++D+ A+ G V + +M ++++ W S++
Sbjct: 731 QNGQEIHSLIFHT-GFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIV 789
Query: 553 SCKTHG 558
+G
Sbjct: 790 GLAKNG 795
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M + +P+ TF V+ AC+ + + G Q+HC + KTG F GL+DMY K
Sbjct: 130 FVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAK 189
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
C L AR +F+ + D VSW++LI GY + G EA+K+F RM+ G P+ +TLV V
Sbjct: 190 CRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTV 249
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF---INQMA 539
+ A +G + + +L+ + N P + ++ A+ G EA F + +
Sbjct: 250 VNAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEAISFFLELKKTG 304
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGK----RAAENILKIDPTNSAALVLLCNIYASSGKWE 595
S+L++ + ++ G +A + L + +ALV N+YA K +
Sbjct: 305 LKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALV---NMYAKCSKMD 361
Query: 596 EVARLMGSMKERGV 609
++ S+ ER +
Sbjct: 362 AAKQVFNSLGERNI 375
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 141/300 (47%), Gaps = 3/300 (1%)
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+DFA+ F+ +E ++ +WN++++ + F M + E+ P+ T +L A
Sbjct: 92 VDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSA 151
Query: 320 CTSPLSLYQGMQIHSYIIKKGF-YSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
C+ + G Q+H + K GF + + I + R L+ D +++
Sbjct: 152 CSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSW 211
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++ ++ + + G A D + +++ YV G L AR+LF + +
Sbjct: 212 TALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPN 271
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
P+VV+W+ +I G+A+ G EEA+ F ++ +G++ +L VL+A + + ++ G +
Sbjct: 272 PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMV 331
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ E G+ S +V++ A+ ++ A+ N + + +IV+W ++L +G
Sbjct: 332 HAQATKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG-ERNIVLWNAMLGGFAQNG 389
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 11/227 (4%)
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ +L +H +K G+ L + N ++D+YVKCG++ A++ F+ +E DV +W+S+
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY 506
+ Y G ++ F M + VRPN T VL+ACS + V G Q++ + + +
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 507 GIIPTRERRSC---VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
G R C ++D+ A+ + +A + A + D V W +L+A G
Sbjct: 174 GF-----RSFCQGGLIDMYAKCRYLRDAR-LVFDGALNLDTVSWTALIAGYVRDGFPMEA 227
Query: 564 KRAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+ + + ++ + LV + N Y + G+ + +L + V
Sbjct: 228 VKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNV 274
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 275/512 (53%), Gaps = 51/512 (9%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQR-NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++ Y + G L AR +F+ +P + N V AM+AG ++N Q + A L+ M
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAM------- 53
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
L+S N+++ YT+ + F
Sbjct: 54 --------------------------------PAKDLVSWNSMLTGYTRNGEMRLGLQFF 81
Query: 240 SSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+A +D+ SW M+DGF + L+ + F ++ +PN SW T++ G A EA
Sbjct: 82 EEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARR 141
Query: 297 LFSEMGDRELIPDGLTVRSLL--CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
LF +M R ++ + + + C +SL+ M +K S V N ++
Sbjct: 142 LFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP------EKNSISWTTVINGYVRM 195
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
+ R + + KPD TF + +CA +A+L++G QLH +MK+G A D+FV N
Sbjct: 196 GKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSN 255
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
L+ MY KCGS+ SA LF ++ DVVSW+SLI YA G G EALKLF +M GV P
Sbjct: 256 ALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAP 315
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
+ VT VG+L+ACSHVGL+++GL+L++ M Y I P E +C+VDLL RAGR+ EA
Sbjct: 316 DEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQL 375
Query: 535 INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKW 594
+ M + + +W +LL +C+ HGN+++ K AAE +L+ +P ++ VLL N+ A +G+W
Sbjct: 376 VRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRW 435
Query: 595 EEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+EVAR+ MKE+G K PG SWIE+Q ++HA
Sbjct: 436 DEVARVRRLMKEKGAEKQPGWSWIELQNRVHA 467
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 65/317 (20%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
P+ V +L + + G + +AR +FD+MP RNVV+W AMIA QN + AI L+++M
Sbjct: 118 PNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM 177
Query: 173 LQSGLM------------------------------PDQFTFGSIIRACSGLCCVGLGRQ 202
+ + PDQ TF + +C+ L + +G+Q
Sbjct: 178 PEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQ 237
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
LH V+KS + + L NALI MY K I A +F I D+ S
Sbjct: 238 LHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVS------------- 284
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
WN++IA A N EA+ LF +M + PD +T +L AC+
Sbjct: 285 ---------------WNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSH 329
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHIT 377
+ QG+++ +++ Y+ P+ C L +AG L F L+ + +
Sbjct: 330 VGLIDQGLKLFKCMVQA--YNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGI 387
Query: 378 FNDVMGACAAMASLEMG 394
+ ++GAC +LE+
Sbjct: 388 WGALLGACRIHGNLELA 404
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 70 LQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
L N +R +P ST+A +S+C+ L +LQ+G+++H ++ S D + N ++ MY K
Sbjct: 204 LLNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAK 263
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI 187
CGS+ A ++F ++ +VVSW ++IA + NG A++L+ +M G+ PD+ TF I
Sbjct: 264 CGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGI 323
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA-LIAMYTKFDRILDAWNVFSSIA-RK 245
+ ACS + + G +L ++++ + L A ++ + + R+ +A+ + +
Sbjct: 324 LSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINA 383
Query: 246 DITSWGSMI 254
+ WG+++
Sbjct: 384 NAGIWGALL 392
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 288/531 (54%), Gaps = 44/531 (8%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A++V + ++W +I + +G ++ + + G+ PD+ F S++RA +
Sbjct: 29 AQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTL 88
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L + LHA VI+ L + NAL+ MY+KF L + F AR + + S+
Sbjct: 89 FKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQ-ARHNHNNKYSV 147
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
K+D R +F+ M ++ SWNT+IAG A EA+++ EMG L PD T+
Sbjct: 148 -----KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTL 202
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----EL----FRL--- 362
S+L T ++ +G +IH Y I+ GF +V + ++++ A EL F L
Sbjct: 203 SSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSN 262
Query: 363 -------------------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
F ML + KP ++F+ V+ ACA + +L +G QL
Sbjct: 263 RDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQL 322
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME--DPDVVSWSSLIVGYAQFG 455
H YI++ G + F+ + L+DMY KCG++ AR +FN +E D D+VSW+++I+G A G
Sbjct: 323 HAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHG 382
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+A+ LF M GV+P +V + VLTACSH GLV+EG + + MQ ++G+ P E
Sbjct: 383 HALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHY 442
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+ V DLL RAGR+ EA DFI+ M + VW +LLA+C+ H N+++ ++ IL +DP
Sbjct: 443 AAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDP 502
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N A V++ NIY+++ +W + A+L M++ G++K P SWIE+ K+H
Sbjct: 503 GNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHT 553
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 174/379 (45%), Gaps = 50/379 (13%)
Query: 35 VDSFLRRFD-----DIWDFDLFSSLCKQN-LYNEALVAFDFLQNNTNFRIRPSTY--ADL 86
+DS + FD D+ ++ + QN +Y EAL + ++ +RP ++ + +
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEAL---NMVKEMGKENLRPDSFTLSSI 205
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ + ++ G+++H + + D + + +++MY KC +E + F + R+
Sbjct: 206 LPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDA 265
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW ++IAGC QNG+ + + + +ML+ + P Q +F S+I AC+ L + LG+QLHA+
Sbjct: 266 ISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAY 325
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+I+ + ++L+ MY K I AR +
Sbjct: 326 IIRLGFDDNKFIASSLLDMYAKCGNI----------------------------KMARYI 357
Query: 267 FNEME--SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP- 323
FN++E ++ SW II G A +A +A+SLF EM + P + ++L AC+
Sbjct: 358 FNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAG 417
Query: 324 -----LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
+ MQ + + G V + L +AG L + + +P +
Sbjct: 418 LVDEGWKYFNSMQ-RDFGVAPGLEHYAAVAD--LLGRAGRLEEAYDFISNMGEEPTGSVW 474
Query: 379 NDVMGACAAMASLEMGTQL 397
+ ++ AC A ++E+ ++
Sbjct: 475 STLLAACRAHKNIELAEKV 493
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 283/548 (51%), Gaps = 47/548 (8%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDARMV 137
P T +S + +S+ +++H + + + ++ N IL+ + G + AR +
Sbjct: 11 PVTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQL 70
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD +P+ +V SW M G S+ + LY++ML+ + PD +T+ + + + +
Sbjct: 71 FDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVAL 130
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LGR+LH HV+K S++ + NALI MY+ I A +F + D+ +W +MI G+
Sbjct: 131 QLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY 190
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+++ ++ SW I+ G + + A F +M +R+ + + L
Sbjct: 191 NRI-----------KKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYL 239
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
L+ Y+ E LF M S+ KPD T
Sbjct: 240 -----RLNCYK-----------------------------EALMLFREMQTSKIKPDEFT 265
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
V+ ACA + +LE+G + YI K + D FV N L+DMY KCG++ A +FN +
Sbjct: 266 MVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLP 325
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D +W++++VG A GCGEEAL +F +M + V P+ VT VGVL+AC+H G+V+EG +
Sbjct: 326 QRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKK 385
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ M +GI P C+VDLL +AG + EA + I M + +VW +LL +C+ H
Sbjct: 386 FFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIH 445
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
+ ++ +RA E IL+++P N A VL CNIYA+ KW+++ L M +RG++K PG S
Sbjct: 446 KDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSL 505
Query: 618 IEIQTKIH 625
IE+ +H
Sbjct: 506 IEMNGIVH 513
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 114/202 (56%), Gaps = 9/202 (4%)
Query: 58 NLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
N Y EAL+ F +Q + +I+P T +++AC+ L +L+LG + +I +K + D
Sbjct: 242 NCYKEALMLFREMQTS---KIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDT 298
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
+ N +++MY KCG++E A +F+ +PQR+ +WTAM+ G + NG A+ ++ QML++
Sbjct: 299 FVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKA 358
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRIL 233
+ PD+ T+ ++ AC+ V G++ A + + HG ++ ++ + K +
Sbjct: 359 SVTPDEVTYVGVLSACTHTGMVDEGKKFFAS-MTARHGIEPNIAHYGCMVDLLGKAGHLK 417
Query: 234 DAWNVFSSIARK-DITSWGSMI 254
+A + ++ K + WG+++
Sbjct: 418 EAHEIIKNMPMKPNSIVWGALL 439
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 297/584 (50%), Gaps = 70/584 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S YA LI + + L +++H +L Q L +++ G + AR VFD+
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P+ + W A+I G S+N A+ +Y M + + PD FTF +++ACSGL + +G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R +HA V + + + QN LIA+Y K R+ GS
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRL------------------GS-------- 172
Query: 261 DFARTVFNEMESP--NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
ARTVF + P + SW I++ A EA+ +FS M ++ PD + + S+L
Sbjct: 173 --ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLN 230
Query: 319 ACTSPLSLYQGMQIHSYIIKKGF-------------------------------YSNVPV 347
A T L QG IH+ ++K G N+ +
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLIL 290
Query: 348 CNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
NA++ A E +F M+ +PD I+ + ACA + SLE ++ Y+
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
++ DVF+ + L+DM+ KCGS+ AR +F+ D DVV WS++IVGY G EA+
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
L+R M GV PN VT +G+L AC+H G+V EG + +M ++ I P ++ +CV+DLL
Sbjct: 411 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLL 469
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + +A + I M + VW +LL++CK H +V++G+ AA+ + IDP+N+ V
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L N+YA++ W+ VA + MKE+G+ K G SW+E++ ++ A
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 66 AFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D N +RP T + ISAC+ + SL+ R +++++ S + D + + +++
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
M+ KCGS+E AR+VFD R+VV W+AMI G +G+ AI LY M + G+ P+ T
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 184 FGSIIRACS 192
F ++ AC+
Sbjct: 427 FLGLLMACN 435
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 196/653 (30%), Positives = 329/653 (50%), Gaps = 77/653 (11%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVA---FDFLQNNTNFR 77
A L + G V D+ + FD + + D S ++Y+ + F + +
Sbjct: 183 ANSLITMFGNLGRVQDA-EKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHG 241
Query: 78 IRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP +T L+S C+S G +H L S + N ++NMY G L DA
Sbjct: 242 LRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAE 301
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+F M +R+++SW MI+ QN A++ Q+ + +P+ TF S + ACS
Sbjct: 302 FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPG 361
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+ +HA V++ +L+ N+LI MY K + + DA VF S+ D+ S
Sbjct: 362 ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVS------ 415
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+N +I G A + +AM +FS + + P+ +T+ +
Sbjct: 416 ----------------------YNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMIN 453
Query: 316 LLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQHQAG----------------- 357
+ + TS L+ G +H+YII+ GF S+ V N+++ A
Sbjct: 454 IHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK 513
Query: 358 -------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
E +LF M + K D + + + +CA++ASLE G QLH
Sbjct: 514 NIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH 573
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS---WSSLIVGYAQFG 455
MK+GL D +V+N MDMY KCG + E+ + D + W++LI GYA++G
Sbjct: 574 GLGMKSGLDSDSYVVNAAMDMYGKCGKM---NEMLQMVPDQAIRPQQCWNTLISGYAKYG 630
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+EA + F++M + G +P++VT V +L+ACSH GLV++G+ Y M + +G+ P +
Sbjct: 631 YFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHC 690
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C+VDLL R GR EAE FI +M + ++W+SLL+S +TH N+++G++AA+ +L++DP
Sbjct: 691 VCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDP 750
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
+ +A VLL N+YA++ +W +V +L MK + K P SW++++ ++ G
Sbjct: 751 FDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFG 803
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 257/553 (46%), Gaps = 98/553 (17%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ +A ++S C SL + G +V H++ S Q + N ++ M+G G ++DA +FD
Sbjct: 146 NAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDR 205
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M + + +S AMI+ S G + ++ M GL PD T S++ C+ G
Sbjct: 206 MEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHG 265
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+H+ ++S S + NAL+ MY+ ++ DA +F +++R+D+ SW +MI +
Sbjct: 266 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSY--- 322
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
V +C N+ +A+ ++ IP+ LT S L AC
Sbjct: 323 ------------------------VQNC-NSTDALKTLGQLFHTNEIPNHLTFSSALGAC 357
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------ 360
+SP +L G +H+ +++ N+ V N+++ A ++F
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYN 417
Query: 361 ----------------RLFSLMLASQTKPDHITFNDVMGACAAMASLE-MGTQLHCYIMK 403
++FS + ++ KP++IT ++ G+ + L G LH YI++
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIR 477
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
TG D +V N L+ MY KCG+L S+ +FN + + ++VSW+++I AQ G GEEALKL
Sbjct: 478 TGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKL 537
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI---------------------- 501
F M+ +G + + V L L++C+ + +EEG+QL+ +
Sbjct: 538 FIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGK 597
Query: 502 ---MQNEYGIIPTRERR-----SCVVDLLARAGRVHEAEDFINQ---MAFDDDIVVWKSL 550
M ++P + R + ++ A+ G EAE+ Q M D V + +L
Sbjct: 598 CGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVAL 657
Query: 551 LASCKTHGNVDVG 563
L++C G VD G
Sbjct: 658 LSACSHAGLVDKG 670
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/534 (25%), Positives = 236/534 (44%), Gaps = 76/534 (14%)
Query: 64 LVAFDFLQNNTNFRIRPSTYA--DLISACSSL---RSLQLGRKVHDHILSSKCQPDAVLH 118
+ AF+ L+ + S +A L++AC + G +H + + +
Sbjct: 23 VAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIG 82
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
+L++YG G + DAR +F EMP+RNVVSWTA++ S NG + Y QM + G+
Sbjct: 83 TALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVP 142
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
+ F +++ C L G Q+ +HVI S + + N+LI M+ R+ DA +
Sbjct: 143 CNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKL 202
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + D S +MI +S F +F
Sbjct: 203 FDRMEEHDTISRNAMISMYSHQGICSKCF----------------------------LVF 234
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQA 356
S+M L PD T+ SL+ C S G IHS ++ S+V V NA++ A
Sbjct: 235 SDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAA 294
Query: 357 GEL----------------------------------FRLFSLMLASQTKPDHITFNDVM 382
G+L + + + P+H+TF+ +
Sbjct: 295 GKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSAL 354
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
GAC++ +L G +H +++ L ++ V N L+ MY KC S+ A ++F M DVV
Sbjct: 355 GACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVV 414
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV---GVLTACSHVGLVEEGLQLY 499
S++ LI GYA G +A+++F +RS+G++PN++T++ G T+ + + L Y
Sbjct: 415 SYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAY 474
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
I G + + ++ + A+ G + + + N + + +IV W +++A+
Sbjct: 475 II---RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA 524
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 293/580 (50%), Gaps = 68/580 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
YA LI S+ L +++ +L + Q L ++N G + AR +FD+ P
Sbjct: 78 YASLID--DSIHKTHLN-QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFP 134
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+V W A++ S++G AIE+Y +M + + PD F+F +++ACS L + +GR+
Sbjct: 135 DPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRR 194
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H + + S + QN L+A+Y K I+ A VF G ++D
Sbjct: 195 VHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVF-----------GRLVD------- 236
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
RT+ SW +II+G A EA+ +FSEM + PD + + S+L A T
Sbjct: 237 -RTI---------VSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTD 286
Query: 323 PLSLYQGMQIHSYIIKKGF------------------------------------YSNVP 346
L G IH +IK G + N
Sbjct: 287 VEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAM 346
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ + A E LF LM + +PD IT + ACA + SLE+ + YI +
Sbjct: 347 ISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEF 406
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV V L+D Y KCGS+ AR +F+ + D DVV WS+++VGY G G E++ LF
Sbjct: 407 RNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHA 466
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
MR +GV PN VT VG+LTAC + GLVEEG L+ M+ +YGI P + +CVVDLL RAG
Sbjct: 467 MRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIEPRHQHYACVVDLLGRAG 525
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ A +F+ M + + VW +LL++CK H +V +G+ AAE + +DP N+ V L N
Sbjct: 526 HLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSN 585
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+YASS W+ VA++ M+E+G+ K G S IEI K+ A
Sbjct: 586 LYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQA 625
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EAL F ++ TN R ++ A + + L+ G+ +H ++ + + L +
Sbjct: 257 EALRIFSEMRK-TNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISL 315
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++Y KCG + AR+ F+++ +++ W AMI+G +NG AIEL+ M + PD
Sbjct: 316 TSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDS 375
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T S I AC+ + + L R + ++ SE + +I +LI Y K + A VF
Sbjct: 376 ITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDR 435
Query: 242 IARKDITSWGSMIDGFSKLDFAR---TVFNEME----SPNLASWNTIIAGVASCSNANEA 294
I KD+ W +M+ G+ R +F+ M SPN ++ ++ + E
Sbjct: 436 IPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEG 495
Query: 295 MSLFSEMGDRELIP 308
LF M D + P
Sbjct: 496 WDLFHRMRDYGIEP 509
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 9/203 (4%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
+N Y E + L + N R T I+AC+ + SL+L R + ++I S+ + D +
Sbjct: 352 KNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVI 411
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
++ +++ Y KCGS++ AR VFD +P ++VV W+AM+ G +GQ +I L+ M Q+G
Sbjct: 412 VNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAG 471
Query: 177 LMPDQFTFGSIIRAC--SGLCCVG--LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
+ P+ TF ++ AC SGL G L ++ + I+ H H L+ DR
Sbjct: 472 VSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRH-QHYACVVDLLGRAGHLDR- 529
Query: 233 LDAWN-VFSSIARKDITSWGSMI 254
A+N V + ++ WG+++
Sbjct: 530 --AYNFVMNMPIEPGVSVWGALL 550
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/596 (31%), Positives = 300/596 (50%), Gaps = 69/596 (11%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP T+ ++ AC+ ++ GR+VH ++ + D + N +L+ YG CG L DA
Sbjct: 37 VRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAG 96
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNG-QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
VFDEMP++++VSW MI S NG A++++ M+ GL P+ T S + L
Sbjct: 97 RVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVEL 156
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
GR++H I+ S + N+LI MY K +A NVF
Sbjct: 157 EFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFY-------------- 202
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
++++ N+ SWN +IA A A+ L +M D +P+ +T
Sbjct: 203 --------------KLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------ 356
++L AC + G +IH+ I G ++ V NA+ A
Sbjct: 249 NVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRD 308
Query: 357 -----------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
E LFS M K D+++F + ACA + +++ G ++H
Sbjct: 309 EVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHG 368
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
++++ + +FV N L+D Y KCG +G AR +F+ M + DV SW+++I+GY G +
Sbjct: 369 FLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDT 428
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
A+ LF MR V + V+ + VL+ACSH GL+E+G + + ++ GI PT+ +C+V
Sbjct: 429 AIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-GIEPTQMHYACMV 487
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DLL RAG + EA + I + D +W +LL +C+ +GN+++ AAE++ ++ P +S
Sbjct: 488 DLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSG 547
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA--SGNDISG 633
LL N+YA +G+W+E R+ MK RGV+K PG SW++I + HA G I G
Sbjct: 548 YYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGEKIEG 603
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 226/498 (45%), Gaps = 68/498 (13%)
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +I G S G +E+Y QM++ G+ PD TF +++AC+ V GR++H V+
Sbjct: 10 WNTLIRGYSIAGV-GGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
K S + N L++ Y + DA VF + KD+ SW +MI FS
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFS---------- 118
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ W+ +A+ +F M D L P+ +T+ S L
Sbjct: 119 ------VNGWHY-----------RDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKA 161
Query: 329 GMQIHSYIIKKG---------------------------FY----SNVPVCNAILQHQAG 357
G ++H I+ G FY NV NA++ + A
Sbjct: 162 GREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQ 221
Query: 358 ELFRLFSLMLASQTK-----PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
F L ++ L Q + P+ +TF +V+ ACA M + G ++H + G A D+FV
Sbjct: 222 NRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFV 281
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L DMY K G L AR +F+ D VS++ LIVG++Q E+L LF M+ G+
Sbjct: 282 SNALTDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGL 340
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+ ++V+ +G L+AC+++ +++G +++ + + I S ++D + GR+ A
Sbjct: 341 KQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANS-LLDFYTKCGRIGLAR 399
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASS 591
+ ++M + D+ W +++ G +D EN+ K D +S + + + + +
Sbjct: 400 NIFDRMT-NKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHG 458
Query: 592 GKWEEVARLMGSMKERGV 609
G E+ + +K RG+
Sbjct: 459 GLLEKGRKYFDELKARGI 476
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 314/594 (52%), Gaps = 75/594 (12%)
Query: 78 IRPSTYADLISACSSLRSLQLGRK----VHDHILSSKCQPDAV-LHNHILNMYGKCGSLE 132
I +Y L+SA S L+ GR+ VH H++ + + V + N ++NMY K G++
Sbjct: 380 INSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIA 439
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
DA VF+ M +++ VSW ++I+G QN A E + +M ++G MP FT S + +C+
Sbjct: 440 DACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCA 499
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L + LG Q+H +K + + NAL+A+Y + + VFS + D
Sbjct: 500 SLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD------ 553
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA-SCSNANEAMSLFSEMGDRELIPDGL 311
SWN++I ++ S ++ ++A+ F +M +
Sbjct: 554 ----------------------QVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRV 591
Query: 312 TVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFS- 364
T ++L A +S LSL++ QIH+ ++K + + NA+L + E ++F+
Sbjct: 592 TFINILSAVSS-LSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFAR 650
Query: 365 -------------------------------LMLASQTKPDHITFNDVMGACAAMASLEM 393
M+ + D TF ++ ACA++A+LE
Sbjct: 651 MSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLER 710
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++H ++ L DV V + L+DMY KCG + A F M +V SW+S+I GYA+
Sbjct: 711 GMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYAR 770
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G GE+ALKLF RM G P+HVT VGVL+ACSHVG VEEG + ++ M Y + P E
Sbjct: 771 HGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVE 830
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL-ASCKTHG-NVDVGKRAAENIL 571
SC+VDLL RAG++ E DFIN M ++++W+++L A C+ +G N ++G+RAAE +L
Sbjct: 831 HFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLL 890
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++P N+ VLL N+YAS KWE+VA+ +MKE V+K G SW+ ++ +H
Sbjct: 891 ELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVH 944
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/605 (22%), Positives = 256/605 (42%), Gaps = 128/605 (21%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
NT T+ LI+ + R++H + + L N ++N+Y + G L
Sbjct: 64 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 123
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC- 191
A+ +FDEM RN+V+W +I+G +QNG+ + A + M+++G +P+ + FGS +RAC
Sbjct: 124 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 183
Query: 192 -SGLCCVGLGRQLHAHVIKSEHGSHL--------------------------------IS 218
SG LG Q+H + K+ +GS + IS
Sbjct: 184 ESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS 243
Query: 219 QNALIAMYTKFDRILDAWNVFSSIAR---------------------------------- 244
N++I++Y++ + A+++FSS+ +
Sbjct: 244 WNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQ 303
Query: 245 -----------KDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSN 290
+D+ +++ GF++ D A+ +F +M N+ S N ++ G+
Sbjct: 304 MLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ 363
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-----GMQIHSYIIKKGFYSN- 344
A +F EM D L+ +L + S S+ + G ++H+++I+ G N
Sbjct: 364 GEAAAKVFHEMKD--LVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNK 421
Query: 345 VPVCNAILQHQAGE--------LFRL----------------------------FSLMLA 368
V + N ++ A +F L F M
Sbjct: 422 VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRR 481
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ + P + T + +CA++ + +G Q+HC +K GL DV V N L+ +Y + G
Sbjct: 482 TGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTE 541
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCG-EEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F+ M + D VSW+S+I + +A+K F +M G + VT + +L+A S
Sbjct: 542 CLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVS 601
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+ L E Q++ ++ +Y + + ++ + G ++E E +M+ D V W
Sbjct: 602 SLSLHEVSHQIHALVL-KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSW 660
Query: 548 KSLLA 552
S+++
Sbjct: 661 NSMIS 665
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 162/631 (25%), Positives = 273/631 (43%), Gaps = 114/631 (18%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS-ACSS 92
++ + RR D + +DLFSS+ K+ L F F N T+ LI+ ACSS
Sbjct: 247 IISVYSRRGDAVSAYDLFSSMQKEGL------GFSFKPNEY-------TFGSLITTACSS 293
Query: 93 LRSLQLGRKVHDHILS----SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
+ G V + +L+ S D + + +++ + + G +DA+ +F++M RNVVS
Sbjct: 294 V---DFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVS 350
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVG----LGRQL 203
++ G + Q AA +++ +M G+ D + ++ A S + GR++
Sbjct: 351 MNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREV 408
Query: 204 HAHVIKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
HAHVI++ + ++ N L+ MY K I DA +VF + KD SW
Sbjct: 409 HAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW------------ 456
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
N++I+G+ + +A F M +P T+ S L +C S
Sbjct: 457 ----------------NSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCAS 500
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHIT 377
+ G QIH +K G ++V V NA+L A E ++FSLM + D ++
Sbjct: 501 LGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM----PEYDQVS 556
Query: 378 FNDVMGACA---------------------------------AMASL---EMGTQLHCYI 401
+N V+GA + A++SL E+ Q+H +
Sbjct: 557 WNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALV 616
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEA 460
+K L+ D + N L+ Y KCG + ++F M E D VSW+S+I GY +A
Sbjct: 617 LKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKA 676
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR----S 516
+ L M G R + T +L+AC+ V +E G++++ GI E S
Sbjct: 677 MDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHAC-----GIRACLESDVVVGS 731
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG-KRAAENILKIDP 575
+VD+ ++ GR+ A F M ++ W S+++ HG+ + K +L P
Sbjct: 732 ALVDMYSKCGRIDYASRFFELMPL-RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQP 790
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
+ V + + + G EE SM E
Sbjct: 791 PDHVTFVGVLSACSHVGFVEEGFEHFKSMSE 821
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 301/598 (50%), Gaps = 71/598 (11%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
+A FL N+ S YA LI SS QL R++H +L Q L +++
Sbjct: 7 LASPFLYTNSGIH-SDSFYASLID--SSTHKAQL-RQIHARLLVLGLQFSGFLITKLIHA 62
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
G + AR VFD++P+ V W A+I G S+N A+ +Y +M + + PD FTF
Sbjct: 63 SSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTF 122
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+++AC GL + +GR +HA V + + + QN LIA+Y K R
Sbjct: 123 PHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRR------------- 169
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESP--NLASWNTIIAGVASCSNANEAMSLFSEMG 302
L ARTVF + P + SW I++ A EA+ +FS+M
Sbjct: 170 ---------------LGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMR 214
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS------------------- 343
++ PD + + S+L A T L QG IH+ ++K G +
Sbjct: 215 KMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVA 274
Query: 344 ------------NVPVCNAILQHQAGELFR-----LFSLMLASQTKPDHITFNDVMGACA 386
N+ + NA++ A F LF M+ +PD I+ + ACA
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACA 334
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ SLE + Y+ ++ DVF+ + L+DM+ KCGS+ AR +F+ D DVV WS+
Sbjct: 335 QVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSA 394
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+IVGY G EA+ L+R M GV PN VT +G+L AC+H G+V EG + M ++
Sbjct: 395 MIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DH 453
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
I P ++ +C++DLL RAG + +A + I M + VW +LL++CK H +V++GK A
Sbjct: 454 KINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYA 513
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
A+ + IDP+N+ V L N+YA++ W+ VA + MKE+G+ K G SW+E++ ++
Sbjct: 514 AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRL 571
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 310/607 (51%), Gaps = 67/607 (11%)
Query: 58 NLYNEALVAFDFLQNNTNFRIRPST--YADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
N +EA++ F ++ + + P T + ++ AC ++ G +H + + +
Sbjct: 79 NNSDEAMILFSAMRV-VDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSV 137
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
+ + +L+MY + G +E + VF EMP RN V+WTA+I G G+ + + +M S
Sbjct: 138 FVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSS 197
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
+ D FTF ++AC+GL V G+Q+H HVI + + N+L MYT+ + D
Sbjct: 198 EELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDG 257
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+F +++ +D+ SW S+ + ++N I + +A+
Sbjct: 258 LCLFENMSERDVVSWTSL---------------------IVAYNRI-------GHEEKAV 289
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
F +M + ++ P+ T ++ AC S L G Q+H + G ++ V N++++
Sbjct: 290 ETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMY 349
Query: 354 -------------------------------HQAG---ELFRLFSLMLASQTKPDHITFN 379
QAG E F+ FS M S KP
Sbjct: 350 STCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALA 409
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
++ MA LE G Q+H GL + V + L++MY KCG++ A ++F +
Sbjct: 410 SLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRD 469
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D+VS +++I GYA+ G +EA+ LF + G P+ VT + VLTAC+H G ++ G +
Sbjct: 470 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYF 529
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+MQ +Y + P +E C+VDLL RAGR+ EAE I++M++ D VVW +LL +CK G+
Sbjct: 530 NLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGD 589
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
++ G+RAAE IL++DPT + ALV L NIY+S+G EE A + +MK +GV K PG S I+
Sbjct: 590 IERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIK 649
Query: 620 IQTKIHA 626
I+ + A
Sbjct: 650 IKDCVSA 656
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 214/483 (44%), Gaps = 68/483 (14%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM--LQSGLMPDQFTFGS 186
G+L AR VFD+MP R++VSWTA+I G + A+ L+ M + + PD
Sbjct: 48 GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+++AC + G LHA+ +K+ S + ++L+ MY + +I + VFS
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFS------ 161
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
EM N +W II G+ E ++ FSEM E
Sbjct: 162 ----------------------EMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEE 199
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN--AILQHQAGEL----- 359
+ D T L AC + G QIH+++I +GF + V V N A + + GE+
Sbjct: 200 LSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLC 259
Query: 360 -----------------------------FRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
F M SQ P+ TF + ACA+++
Sbjct: 260 LFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSR 319
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L G QLHC + GL + V N +M MY CG L SA LF M D++SWS++I G
Sbjct: 320 LVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGG 379
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y+Q G GEEA K F MR SG +P L +L+ ++ ++E G Q++ + +G+
Sbjct: 380 YSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFC-FGLEQ 438
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
RS ++++ ++ G + EA + DDIV +++ HG E
Sbjct: 439 NSTVRSTLINMYSKCGNIKEASKIFEETD-RDDIVSLTAMINGYAEHGKSKEAIDLFEKS 497
Query: 571 LKI 573
LK+
Sbjct: 498 LKV 500
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 185/444 (41%), Gaps = 45/444 (10%)
Query: 19 WDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYN-----EALVAFDFLQNN 73
W A L + + GE+ D L F+++ + D+ S YN E V N
Sbjct: 239 WVANSLATMYTECGEMRDG-LCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRN 297
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
+ T+A + SAC+SL L G ++H ++ S + N ++ MY CG L+
Sbjct: 298 SQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDS 357
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A ++F M R+++SW+ +I G SQ G A + + M QSG P F S++
Sbjct: 358 ASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGN 417
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+ + GRQ+HA + ++ LI MY+K I +A +F R DI S +M
Sbjct: 418 MAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAM 477
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
I+G+ A + EA+ LF + PD +T
Sbjct: 478 INGY----------------------------AEHGKSKEAIDLFEKSLKVGFSPDSVTF 509
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLA 368
S+L ACT L G H + + + Y+ P C L +AG L ++
Sbjct: 510 ISVLTACTHSGQLDLGF--HYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDE 567
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
K D + + ++ AC A +E G + I++ ++ L ++Y G+L
Sbjct: 568 MSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVT-LANIYSSTGNLEE 626
Query: 429 ARELFNFMEDPDVVS---WSSLIV 449
A + M+ V+ WSS+ +
Sbjct: 627 AANVRKNMKAKGVIKEPGWSSIKI 650
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR- 468
F N + + G+L AR++F+ M D+VSW+++I GY +EA+ LF MR
Sbjct: 34 TFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRV 93
Query: 469 -SSGVRPNHVTLVGVLTACSHVGLVE--EGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
V P+ + VL AC + E L Y + + ++ + S ++D+ R
Sbjct: 94 VDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAV---KTSLLSSVFVGSSLLDMYKRV 150
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
G++ ++ ++M F + V W +++ G G
Sbjct: 151 GKIEKSCRVFSEMPF-RNAVTWTAIITGLVHAGRYKEG 187
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 304/586 (51%), Gaps = 78/586 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +L+ Y K G ++ FD++PQR+ VSWT MI G GQ + AI + M++ G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK---------- 228
P QFT +++ + + C+ G+++H+ ++K ++ N+L+ MY K
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 229 FDRI----LDAWNV-----------------FSSIARKDITSWGSMIDGFSK-------L 260
FDR+ + +WN F +A +DI +W SMI GF++ L
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 261 D-FARTVFNEMESPN---LAS--------------------------------WNTIIAG 284
D F++ + + + SP+ LAS N +I+
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+ C A L + G ++L +G T +LL + Q I + + +
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFT--ALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 345 VPVCNAILQHQA-GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ QH + GE LF M+ +P+ T ++ +++ASL G Q+H +K
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALK 462
+G V V N L+ MY K G++ SA F+ + + D VSW+S+I+ AQ G EEAL+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M G+RP+H+T VGV +AC+H GLV +G Q + +M++ IIPT +C+VDL
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + EA++FI +M + D+V W SLL++C+ H N+D+GK AAE +L ++P NS A
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
L N+Y++ GKWEE A++ SMK+ V+K G SWIE++ K+H G
Sbjct: 622 ALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFG 667
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 246/535 (45%), Gaps = 76/535 (14%)
Query: 80 PSTYADLISACSSLRSLQLGRK--------VHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
P + + L+ C++L + + VH ++ S L N+++N+Y K G
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 132 EDARMVFDEM-------------------------------PQRNVVSWTAMIAGCSQNG 160
AR +FDEM PQR+ VSWT MI G G
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
Q + AI + M++ G+ P QFT +++ + + C+ G+++H+ ++K ++ N
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID---GFSKLDFARTVFNEMESPNLAS 277
+L+ MY K + A VF + +DI+SW +MI ++D A F +M ++ +
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 278 WNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
WN++I+G A+ +FS+M D L PD T+ S+L AC + L G QIHS+I
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI 305
Query: 337 IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+ GF + V NA L ++S +T I + GT+
Sbjct: 306 VTTGFDISGIVLNA--------LISMYSRCGGVETARRLIE--------------QRGTK 343
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
L ++ F L+D Y+K G + A+ +F ++D DVV+W+++IVGY Q G
Sbjct: 344 --------DLKIEGF--TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
EA+ LFR M G RPN TL +L+ S + + G Q++ G I + +
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSN 452
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
++ + A+AG + A + + + D V W S++ + HG+ + E +L
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 207/449 (46%), Gaps = 78/449 (17%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I P+ T +++++ ++ R ++ G+KVH I+ + + + N +LNMY KCG A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 136 MVFD-------------------------------EMPQRNVVSWTAMIAGCSQNGQENA 164
VFD +M +R++V+W +MI+G +Q G +
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 165 AIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A++++ +ML+ L+ PD+FT S++ AC+ L + +G+Q+H+H++ + I NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 224 AMYTKFDRILDAWNVFSSIARKD--ITSWGSMIDGFSKL---DFARTVFNEMESPNLASW 278
+MY++ + A + KD I + +++DG+ KL + A+ +F ++ ++ +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+I G + EA++LF M P+ T+ ++L +S SL G QIH +K
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 339 KGFYSNVPVCNAIL------------------------------------QH-QAGELFR 361
G +V V NA++ QH A E
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM-DMY 420
LF ML +PDHIT+ V AC + G Q + + M D++
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 421 VKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G L A+E M +PDVV+W SL+
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 183/451 (40%), Gaps = 94/451 (20%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
++ F +R D+ D+FS + + D L + F T A ++SAC++L
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLR-----------DSLLSPDRF-----TLASVLSACANL 292
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM----------------- 136
L +G+++H HI+++ ++ N +++MY +CG +E AR
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 137 ----------------VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+F + R+VV+WTAMI G Q+G AI L+ M+ G P+
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+T +++ S L + G+Q+H +KS + NALI MY K I A F
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 241 SIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
I +D SW SM I +A +A EA+ LF
Sbjct: 473 LIRCERDTVSWTSM----------------------------IIALAQHGHAEEALELFE 504
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQH 354
M L PD +T + ACT + QG Q + + K +P C L
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL----DV 410
+AG L + +PD +T+ ++ AC ++++G + L L +
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK-----VAAERLLLLEPENS 617
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ L ++Y CG A ++ M+D V
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 192/449 (42%), Gaps = 59/449 (13%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQ--------LHAHVIKSEHGSHLISQNALIAMYTKFD 230
P + +++ C+ L + + +H VIKS + N L+ +Y+K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
L A +F + + SW +++ +SK +D F+++ + SW T+I G +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
++A+ + +M + P T+ ++L + + + G ++HS+I+K G NV V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
N++L M A P MA ++ +
Sbjct: 184 SNSLLN------------MYAKCGDP-------------MMAK---------FVFDRMVV 209
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D+ N ++ ++++ G + A F M + D+V+W+S+I G+ Q G AL +F +M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 468 -RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY---GIIPTRERRSCVVDLL 522
R S + P+ TL VL+AC+++ + G Q++ I+ + GI+ + ++ +
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV-----LNALISMY 324
Query: 523 ARAGRVHEAEDFINQMAFDD-DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
+R G V A I Q D I + +LL G+++ K ++ D A+
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVR 610
++ Y G + E L SM G R
Sbjct: 385 IVG---YEQHGSYGEAINLFRSMVGGGQR 410
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 295/548 (53%), Gaps = 51/548 (9%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY +IS+ ++ + L R H + DAV N +L Y + G +E+AR +F+
Sbjct: 8 TYNVMISSHANHGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR 63
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ +V+SW A+++G Q G+ + A EL+ +M
Sbjct: 64 TEWDVISWNALMSGYVQWGKMSEARELFDRM----------------------------- 94
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-- 259
G ++S N +++ Y + +++A +F + +D+ +W +++ G+++
Sbjct: 95 ----------PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 144
Query: 260 -LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
L+ AR VF+ M N SWN ++A +EA LF+ M R + + ++L
Sbjct: 145 MLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA----SWNTMLT 200
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLASQTKPDHIT 377
L + + + +K S + A Q + E +LF M +
Sbjct: 201 GYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSA 260
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F V+ CA +A+LE G QLH +++ G + FV N L+ MY KCG++ AR F ME
Sbjct: 261 FACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME 320
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ DVVSW+++I GYA+ G G+EAL++F MR++ +P+ +TLVGVL ACSH GLVE+G+
Sbjct: 321 ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 380
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ M +++G+ E +C++DLL RAGR+ EA D + M F+ D +W +LL + + H
Sbjct: 381 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 440
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N ++G+ AAE I +++P N+ VLL NIYASSGKW + ++ M+ERGV+KVPG SW
Sbjct: 441 RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSW 500
Query: 618 IEIQTKIH 625
IE+Q K+H
Sbjct: 501 IEVQNKVH 508
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ S +A ++S C+ + +L+ G ++H ++ + + N +L MY KCG++EDAR
Sbjct: 256 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 315
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLC 195
F+EM +R+VVSW MIAG +++G A+E++ M + PD T ++ AC SGL
Sbjct: 316 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 375
Query: 196 CVGLGRQLHAH-----VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITS 249
G+ H K EH +I + + R+ +A ++ + D T
Sbjct: 376 EKGISYFYSMHHDFGVTAKPEH------YTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 429
Query: 250 WGSMI 254
WG+++
Sbjct: 430 WGALL 434
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 311/581 (53%), Gaps = 48/581 (8%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+S C ++LGR+ H ++ D + +++MY KCG ++ A V+D+M +
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA 179
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+ +I+ ++NG A ++++Q+ G P+ +T+ +++ C + + G+QLHAH
Sbjct: 180 ATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH 239
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL-DFART 265
V+K ++ S NAL+ +Y+K + +A VF ++ +++I SW + I+GF + DF +
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKA 299
Query: 266 V--FNEMES----PNLASWNTIIAGVA----------SCSN---ANEAMSLF-----SEM 301
+ F+ M PN +++ ++A + SN MS+F E
Sbjct: 300 LKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEE 359
Query: 302 GDR--ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--- 356
G++ L P+ + S+L AC G +H+ I+K F S+ + +A++ +
Sbjct: 360 GNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCG 419
Query: 357 ------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
L FS ML P +T + ++ AC +A+L G ++H
Sbjct: 420 HVEKACRVFDWIPNVVSWNTLIAGFSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIH 479
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
Y M G+ DV+V + L+DMY KCG + A+ LF M + + V+W+SLI GYA G
Sbjct: 480 GYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCN 539
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA++LF +M S + +H+T VL ACSH G+VE G L+R MQ +Y I P E +C+
Sbjct: 540 EAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACM 599
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VDLL RAG++ EA D I M + D VW +LL +C+ HGN+++ + AAE++ +++P +
Sbjct: 600 VDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESP 659
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+ +LL N+YA +G+W A++ MK+R K PG SWIE
Sbjct: 660 GSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 700
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 227/506 (44%), Gaps = 97/506 (19%)
Query: 20 DAFELCMLLD---QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEA---LVAFDFLQNN 73
D F L+D + GEV DS +R +D + D + C + Y + AF
Sbjct: 147 DEFVCTSLIDMYAKCGEV-DSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQI 205
Query: 74 TNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
N RP+ TY+ +++ C ++ ++Q G+++H H++ + + + N +L +Y KCG +
Sbjct: 206 GNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMM 265
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
E+A +VF+ + QRN++SWTA I G Q+G A++ + M +SG+ P++FTF ++ +C
Sbjct: 266 EEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC 325
Query: 192 SGLCCVGLGRQLHAHVIKSE-HGSHLISQNALIAMYTKFDR-------------ILDAW- 236
LG+ + + G HL+S L M + ++ IL A
Sbjct: 326 G----CDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACG 381
Query: 237 ---------NVFSSIARKDITSWGSMIDG----FSK---LDFARTVFNEMESPNLASWNT 280
N+ + I + S +I +SK ++ A VF+ + PN+ SWNT
Sbjct: 382 HLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI--PNVVSWNT 439
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+IAG FS+M D+ P +T+ SLL ACT+ +L G +IH Y + G
Sbjct: 440 LIAG-------------FSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIG 486
Query: 341 FYSNVPVCNAILQHQA------------------------------------GELFRLFS 364
+V V +A++ A E LF+
Sbjct: 487 VEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFN 546
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKC 423
M S TK DH+TF V+ AC+ +E+G L + K + + ++D+ +
Sbjct: 547 QMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRA 606
Query: 424 GSLGSARELFNFME-DPDVVSWSSLI 448
G L A +L M +PD W +L+
Sbjct: 607 GKLSEAYDLIKAMPVEPDKFVWGALL 632
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 129/592 (21%), Positives = 237/592 (40%), Gaps = 160/592 (27%)
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWT-AMIAGCSQNGQENAAIELYVQMLQS------ 175
N+ G L +A ++F++ P+R VS T + +GC+ + +E + ++
Sbjct: 48 NVVGGWVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFG 107
Query: 176 -GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
G Q+ F S + C CV LGR+ H V+K GS +LI MY K +
Sbjct: 108 GGFPHRQYVF-SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEV-- 164
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
D A V+++M S + A+ N +I+ A +A
Sbjct: 165 --------------------------DSAVRVYDKMTSLDAATCNCLISAYARNGFFVQA 198
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ- 353
+F ++G+ P+ T ++L C + ++ +G Q+H++++K + S V NA+L
Sbjct: 199 FQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTL 258
Query: 354 --------------------------------HQAGEL---FRLFSLMLASQTKPDHITF 378
+Q G+ + FS+M S +P+ TF
Sbjct: 259 YSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTF 318
Query: 379 NDVMGACAA---------MASLEMGTQ--LHCYIMK---------TGLALDVFVMNGLMD 418
+ V+ +C +S G Q + ++++ T L + FV+ ++
Sbjct: 319 SIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILK 378
Query: 419 -----------------------------------MYVKCGSLGSARELFNFMEDPDVVS 443
MY KCG + A +F+++ P+VVS
Sbjct: 379 ACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI--PNVVS 436
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W++LI G++Q M G P+ VT+ +L AC++V + G +++
Sbjct: 437 WNTLIAGFSQ-------------MLDQGFCPSSVTISSLLPACTNVANLRHGKEIHG--- 480
Query: 504 NEYGIIPTRER----RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG- 558
Y ++ E+ RS +VD+ A+ G + EA+ M + + V W SL+ HG
Sbjct: 481 --YAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMP-ERNTVTWNSLIFGYANHGY 537
Query: 559 ---NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+++ + E+ K+D A++ C + +G E L M+E+
Sbjct: 538 CNEAIELFNQMEESDTKLDHLTFTAVLNAC---SHAGMVELGESLFRKMQEK 586
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/538 (35%), Positives = 281/538 (52%), Gaps = 58/538 (10%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++M+ + G L AR VF+ + +R VV WT MI Q G A+EL++ ML+ G PD
Sbjct: 189 LIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPD 248
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+T S++ AC+ GLG+QLH+ V++ S L+ MYTK
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM--------- 299
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS-NANEAMSLFS 299
++ AR VF M + N+ SW +I+G C N A+ L
Sbjct: 300 ----------------EQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLC 343
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------ 353
EM + + P+ LT SLL AC + G QIH+ ++K + V NA++
Sbjct: 344 EMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESG 403
Query: 354 --HQAGELF-RLFSLMLASQTKP----------------------DHITFNDVMGACAAM 388
+A + F +L+ L S + TF ++ A A +
Sbjct: 404 CMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATV 463
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSL 447
G QLH +KTG D + N L+ MY +CG L A F+ MED +V+SW+S+
Sbjct: 464 GLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSI 523
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I A+ G E AL LF M SGV+PN VT + VL+ACSHVGLV+EG + +R MQ ++
Sbjct: 524 ISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHR 583
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
+IP E +C+VDLLAR+G V EA +FIN+M D +VWK+LL +C+T+ N+++G+ AA
Sbjct: 584 LIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAA 643
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++ ++P + A VLL N+YA G W+EVAR+ M+ R + K G SW+ + IH
Sbjct: 644 RHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIH 701
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 234/509 (45%), Gaps = 80/509 (15%)
Query: 98 LGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-RNVVSWTAMIAG 155
LGR +H +L ++ DA++ N +L MY KCG + AR VFD M R++VSWTAM
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
++NG E A+ L +ML+SGL P+ FT + AC + +S G+
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC-----------FPGELFRSSGGTV 169
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMES 272
L A+ T F W D++ ++ID F++ L AR VFN +
Sbjct: 170 LG-----FAIKTGF------WGT-------DVSVGCALIDMFARNGDLVAARKVFNGLVE 211
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
+ W +I A +A+ LF M + PDG T+ S++ AC S G Q+
Sbjct: 212 RTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQL 271
Query: 333 HSYIIKKGFYSNVPV-CNAI-----LQHQ-----AGELFR-------------------- 361
HS +++ G S+ V C + LQ + A ++F+
Sbjct: 272 HSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQC 331
Query: 362 ---------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
L ML +P+H+T++ ++ ACA ++ + G Q+H +MKT + V
Sbjct: 332 GGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVV 391
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ MY + G + AR+ F+ + + +++S SS I G ++ S V
Sbjct: 392 GNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI-----GETGRSNASWSSQIESMDV 446
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+ T +L+A + VGL +G QL+ + + G + + +V + +R G + +A
Sbjct: 447 GVSTFTFASLLSAAATVGLPTKGQQLH-ALSIKTGFESDKGISNSLVSMYSRCGYLDDAC 505
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVD 561
++M D +++ W S++++ HG+ +
Sbjct: 506 RAFDEMEDDHNVISWTSIISALAKHGHAE 534
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 162/339 (47%), Gaps = 47/339 (13%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A + L N I P+ TY+ L+ AC++L GR++H ++ + V+ N +++
Sbjct: 338 AVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVS 397
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY + G +E+AR FD++ +RN++S ++ I + G+ NA+ ++ + G+ FT
Sbjct: 398 MYAESGCMEEARKAFDQLYERNLLSTSSDIG---ETGRSNASWSSQIESMDVGV--STFT 452
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F S++ A + + G+QLHA IK+ S N+L++MY++
Sbjct: 453 FASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRC-------------- 498
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMG 302
G+ LD A F+EME N+ SW +II+ +A +A A+SLF +M
Sbjct: 499 ------------GY--LDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMI 544
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQI-------HSYIIKKGFYSNVPVCNAILQHQ 355
+ P+ +T ++L AC+ + +G + H I + Y+ C L +
Sbjct: 545 LSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYA----CMVDLLAR 600
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+G + + K D + + ++GAC ++E+G
Sbjct: 601 SGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIG 639
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 297/584 (50%), Gaps = 70/584 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S YA LI + + L +++H +L Q L +++ G + AR VFD+
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P+ + W A+I G S+N A+ +Y M + + PD FTF +++ACSGL + +G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R +HA V + + + QN LIA+Y K R+ GS
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRL------------------GS-------- 172
Query: 261 DFARTVFNEMESP--NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
ARTVF + P + SW I++ A EA+ +FS+M ++ PD + + S+L
Sbjct: 173 --ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230
Query: 319 ACTSPLSLYQGMQIHSYIIKKGF-------------------------------YSNVPV 347
A T L QG IH+ ++K G N+ +
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLIL 290
Query: 348 CNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
NA++ A E +F M+ +PD I+ + ACA + SLE ++ Y+
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
++ DVF+ + L+DM+ KCGS+ AR +F+ D DVV WS++IVGY G EA+
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
L+R M GV PN VT +G+L AC+H G+V EG + M ++ I P ++ +CV+DLL
Sbjct: 411 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLL 469
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + +A + I M + VW +LL++CK H +V++G+ AA+ + IDP+N+ V
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L N+YA++ W+ VA + MKE+G+ K G SW+E++ ++ A
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 66 AFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D N +RP T + ISAC+ + SL+ R +++++ S + D + + +++
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
M+ KCGS+E AR+VFD R+VV W+AMI G +G+ AI LY M + G+ P+ T
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 184 FGSIIRACS 192
F ++ AC+
Sbjct: 427 FLGLLMACN 435
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 291/550 (52%), Gaps = 66/550 (12%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D +L N ++ MYGKCG L A VFD M +RNVVSWTA++ G QNG ++ L+ +M
Sbjct: 6 DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
SG+ P+ FTF + ++AC L + +GRQ+H +K+ + N++I MY+K RI
Sbjct: 66 LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRI- 124
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+ A +F M NL SWN +IAG +
Sbjct: 125 ---------------------------NEAACMFEVMPVRNLISWNAMIAGYTVAGFCEK 157
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-YS-NVPVCNAI 351
A+ LF +M + D T S L AC+ ++ +G QIH+++I GF YS N V A+
Sbjct: 158 ALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGAL 217
Query: 352 --LQHQAGELF----------------------------------RLFSLMLASQTKPDH 375
L + G+LF LF + S + D
Sbjct: 218 IDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDG 277
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+ +MG A A ++ G Q+H + +K +D+ V N ++DMY+KCG + A LF+
Sbjct: 278 FILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSE 337
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M +V+SW+ +I GY + G G+EA++LF M+ P+ VT + VL CSH GLVE+G
Sbjct: 338 MPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKG 397
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ + + + +GI E +C+VDLL RAGR+ EA++ ++ M + ++ +W++LL++C+
Sbjct: 398 QEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACR 457
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
HG++++GK +L++D N V++ NIYA +G W+E R+ +K + ++K G+
Sbjct: 458 VHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGR 517
Query: 616 SWIEIQTKIH 625
SW+EI ++H
Sbjct: 518 SWVEIDKEVH 527
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 204/457 (44%), Gaps = 88/457 (19%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFR------------IRPS--TYADLISACSSLR 94
D+F + K+N+ + + +QN ++P+ T++ + AC L
Sbjct: 28 DVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLN 87
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
L +GR++HD + + V+ N I++MY KCG + +A +F+ MP RN++SW AMIA
Sbjct: 88 GLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIA 147
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
G + G A+ L+ +M + G D+FTF S ++ACS L + G Q+HA +I G
Sbjct: 148 GYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLIT---GG 204
Query: 215 HLISQN-----ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
L S N ALI +Y K ++ A VFS I K + SW ++I G++
Sbjct: 205 FLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYA----------- 253
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
+ NLA E+M LF ++ + + DG + S++ + QG
Sbjct: 254 -QEGNLA----------------ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG 296
Query: 330 MQIHSYIIKKGFYSNVPVCNAIL-----------------------------------QH 354
Q+H++ IK ++ VCN+IL +H
Sbjct: 297 KQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKH 356
Query: 355 QAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFV 412
G E RLF M T+PD +T+ V+ C+ +E G + + G+ V
Sbjct: 357 GLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEH 416
Query: 413 MNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++D+ + G L A+ L + M + +V W +L+
Sbjct: 417 YACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLL 453
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G D+ + N L+ MY KCG LG A ++F+ M +VVSW++L+ G+ Q G E+L LF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M SGV+PN T L AC + ++ G Q++ I + G + ++D+ ++
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICV-KTGFDMVNVVGNSIIDMYSK 120
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
GR++EA M +++ W +++A G
Sbjct: 121 CGRINEAACMFEVMPV-RNLISWNAMIAGYTVAG 153
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/628 (30%), Positives = 322/628 (51%), Gaps = 108/628 (17%)
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN------------------ 145
D I+ D V+ N +++ Y + G+L AR++FDEMP+RN
Sbjct: 76 DQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVE 135
Query: 146 -------------VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
VVSWTA I+G +NG A++L+ ++L+SG+ P+ TF S++RAC
Sbjct: 136 ESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACG 195
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L GLG + V+K+ +L N+LI + + I A VF + ++D+ SW +
Sbjct: 196 ELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTA 255
Query: 253 MIDGFSK---LDFARTVFNEME-----------------------------------SPN 274
++D + + L AR +F+EM PN
Sbjct: 256 ILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPN 315
Query: 275 LASWNTIIAGVASCSNANEAMSL---FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
++ + ++ +AS + +++ +++G + + G ++ L C C P G
Sbjct: 316 ISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKP---DDGRL 372
Query: 332 IHSYIIKK---------GFYS-------------NVP----------VCNAILQHQAGEL 359
+ I++K G YS +P + + Q ++
Sbjct: 373 VFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKV 432
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+F+ +L S P+ TF+ V+ ACA++ASL+ G +H I+K G+ D+FV L DM
Sbjct: 433 LEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVT 478
Y KCG +GS++++F M + + +SW+ +I G A+ G E+L LF M R+S V PN +
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
L+ VL ACSH GLV++GL + M+ YGI P + +CVVDLL+R+GR++EAE+FI +
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
F + W +LL+ CK + + + +R A+ + ++ NSA VLL NIYAS+G+W +V+
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ M+E+G++K G SW+E++ ++H+
Sbjct: 673 NIRKLMREKGLKKSGGCSWVEVRNQVHS 700
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 41/321 (12%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ L +A + D R + W + + + EAL F + F+
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWS-AMIARYSQSGYAEEALKLFSKMVQE-GFKPN 315
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
S +A +SA +SLR+L G +H H+ D + + ++++Y KCG +D R+VFD
Sbjct: 316 ISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFD 375
Query: 140 EMPQRNVVSWTAMIAGCSQNGQ---------------------------EN----AAIEL 168
+ ++NVV W +M+ G S NG+ EN +E+
Sbjct: 376 LILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEV 435
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ +L SG P++ TF S++ AC+ + + G +H +IK + AL MY K
Sbjct: 436 FNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAK 495
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA---RTVFNEME-----SPNLASWNT 280
I + VF + K+ SW MI G ++ FA +F EME +PN +
Sbjct: 496 CGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLS 555
Query: 281 IIAGVASCSNANEAMSLFSEM 301
++ + C ++ + F+ M
Sbjct: 556 VLFACSHCGLVDKGLWYFNSM 576
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 172/407 (42%), Gaps = 70/407 (17%)
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSE-------------------------------HGS 214
S+++ S + G LHAH+IK+ GS
Sbjct: 26 SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGS 85
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG---FSKLDFARTVFNEME 271
L+ N +I+ Y ++ ++ A +F + ++ SW ++I G + +++ + F
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
N+ SW I+G EA+ LF + + + P+ +T S++ AC GM
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
I ++K GF + V N++ IT + MG +
Sbjct: 206 ILGLVVKAGFEHYLSVSNSL------------------------ITLSLRMG------EI 235
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
++ ++ + K DV ++D YV+ G L AR +F+ M + + +SWS++I Y
Sbjct: 236 DLARRVFDRMEKR----DVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARY 291
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+Q G EEALKLF +M G +PN L+A + + + G+ ++ + + GI
Sbjct: 292 SQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHV-TKIGIDKD 350
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S ++DL + G+ + + + + ++V W S++ +G
Sbjct: 351 VFIGSSLIDLYCKCGKPDDGR-LVFDLILEKNVVCWNSMVGGYSING 396
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 11/186 (5%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST++ ++ AC+S+ SL G VH I+ Q D + + +MY KCG + ++ VF+
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACS--GLCCV 197
MP++N +SWT MI G +++G ++ L+ +M + S + P++ S++ ACS GL
Sbjct: 509 MPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK 568
Query: 198 GL---GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM 253
GL + IK + G H ++ + ++ R+ +A +I + + +W ++
Sbjct: 569 GLWYFNSMEKVYGIKPK-GKHY---TCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAAL 624
Query: 254 IDGFSK 259
+ G K
Sbjct: 625 LSGCKK 630
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 136/330 (41%), Gaps = 70/330 (21%)
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQT 371
T SLL ++ + QG +H+++IK GF S + +L L L
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIA-----------IKLLILYL---- 67
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
C A ++ I+K D+ V N ++ YV+ G+L AR
Sbjct: 68 ------------NCRKFAEIDQ-------IVKEFDGSDLVVSNCMISAYVQWGNLVQARL 108
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGE-------------------------------EA 460
LF+ M + + VSWS+LI G ++G E EA
Sbjct: 109 LFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEA 168
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
LKLF R+ SGVRPN VT V+ AC +G G+ + ++ G + ++
Sbjct: 169 LKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKA-GFEHYLSVSNSLIT 227
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
L R G + A ++M D+V W ++L + G++ +R + + + + + +A
Sbjct: 228 LSLRMGEIDLARRVFDRME-KRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSA 286
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVR 610
++ Y+ SG EE +L M + G +
Sbjct: 287 MIAR---YSQSGYAEEALKLFSKMVQEGFK 313
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 310/635 (48%), Gaps = 77/635 (12%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C +++A +V D R W + SS +EAL D Q I+P T
Sbjct: 194 CGSVEEARKVFDGIKNRDAVSWT-SMISSYANNGFCDEAL---DLYQQMDADGIQPDSIT 249
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ + AC+ L G+ +H I+SS + D V + ++NMY +CG + AR F+++
Sbjct: 250 FTSALLACTKLVD---GKAIHARIVSSNMESDFV-GSALINMYARCGDVSSARQAFEKIQ 305
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
++VV WT+++ Q A++LY +M G+ D T+ + + AC+ L + G+
Sbjct: 306 NKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKA 365
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H+ V + S L+ AL+ MY K +LD
Sbjct: 366 IHSRVFECGFQS-LVVHTALLTMYAKC----------------------------GELDA 396
Query: 263 ARTVFNEM-ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR VFN + + N+ W +I+ A + EA+ L+ +M P+ T ++L AC+
Sbjct: 397 ARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACS 456
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------------- 352
S L GM+IH ++ SNV V NA++
Sbjct: 457 SSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNA 516
Query: 353 ------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT- 404
QH G E L+ M + PD +T + ACA SL++G ++H ++K
Sbjct: 517 MIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQ 576
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
+ V L++MY +CG L +AR +F M DV+SW+++ YAQ G ++ L L+
Sbjct: 577 SFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLY 636
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M G+RPN +T +L CSH GL+ G++ + MQ+E+ ++P RE C+VDLL R
Sbjct: 637 LEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGR 696
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
+GR+ +AE + M + D V W ++L SCKTH + D KRAA + ++DP N++ LL
Sbjct: 697 SGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLL 756
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+I+ ++G +E + SMKE G++K PGQS IE
Sbjct: 757 SSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 275/553 (49%), Gaps = 78/553 (14%)
Query: 50 LFSSLCKQNLYNEALVAFDFL--QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHIL 107
+ S+ K L+N AL + + + +I TY ++ +CS++ SL+ R++H I+
Sbjct: 115 MLSAYGKNGLWNRALELYHRMCEEGPEPDKI---TYFIVLGSCSAVGSLREAREIHASII 171
Query: 108 SSK--CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+ + + L N ++NMYGKCGS+E+AR VFD + R+ VSWT+MI+ + NG + A
Sbjct: 172 EAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEA 231
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
++LY QM G+ PD TF S + AC+ L G+ +HA ++ S S + +ALI M
Sbjct: 232 LDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESDFVG-SALINM 287
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
Y + + A F I K + W S++ + V
Sbjct: 288 YARCGDVSSARQAFEKIQNKHVVCWTSLMTAY---------------------------V 320
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
+C + EA+ L+ M + DG+T + L AC S +L +G IHS + + GF S V
Sbjct: 321 QTC-HYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLV 379
Query: 346 -------------------PVCNAILQH--------------QAG---ELFRLFSLMLAS 369
V N + Q QAG E L+ M+A
Sbjct: 380 VHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAE 439
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
T+P+ TF++V+ AC++ LE G ++H ++ + LA +V V N L+ MY KCGSL A
Sbjct: 440 GTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELA 499
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+ F D+VSW+++I YAQ G G EAL L++ M S GV P+ VT+ L+AC+
Sbjct: 500 KSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAIS 559
Query: 490 GLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
G ++ G +++ R+++N+ + ++ +V++ R GR+ A M D++ W
Sbjct: 560 GSLQLGREIHSRVLKNQ-SFRSSLMVQTALVNMYGRCGRLETARSMFEDMG-QRDVLSWT 617
Query: 549 SLLASCKTHGNVD 561
++ ++ G+ D
Sbjct: 618 AMTSAYAQQGHAD 630
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 206/639 (32%), Positives = 333/639 (52%), Gaps = 70/639 (10%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL-- 93
FD I D D ++LC+ + +AL AF +Q N + T + ACS+L
Sbjct: 151 FDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQME-NMELSSFTLVSVALACSNLGV 209
Query: 94 -RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM 152
L+LG+++H + L Q +N ++ MY K G ++D++ +F+ R++VSW M
Sbjct: 210 MHGLRLGKQLHGYSLRVGDQ-KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTM 268
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
I+ SQ+ + + A+ + M+ G+ D T S++ ACS L + +G+++HA+V+++
Sbjct: 269 ISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN-- 326
Query: 213 GSHLISQN----ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK--LD-FART 265
+ LI + AL+ MY ++ VF I + I W +MI G+++ LD A
Sbjct: 327 -NDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALI 385
Query: 266 VFNEMES-----PNLASWNTIIAGVASC---SNA-------------------NEAMSLF 298
+F EM PN + +++ C SN N M ++
Sbjct: 386 LFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMY 445
Query: 299 SEMGD---RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ 355
S MG E I D + VR + T I Y++ G YSN V +Q
Sbjct: 446 SRMGKMDISETIFDSMEVRDRVSWNT---------MITGYVLS-GRYSNALVLLHEMQRM 495
Query: 356 AGELFRLFSLML---ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
KP+ IT V+ CAA+A++ G ++H Y ++ LA D+ V
Sbjct: 496 ENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITV 555
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM----- 467
+ L+DMY KCG L +R +FN M + +V++W+ LI+ G GEEAL+LF+ M
Sbjct: 556 GSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAG 615
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
R +PN VT + V ACSH GL+ EGL L+ M++++G+ PT + +CVVDLL RAG+
Sbjct: 616 RGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQ 675
Query: 528 VHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EA + +N M + D + W SLL +C+ H NV++G+ AA+N+L ++P ++ VLL N
Sbjct: 676 LEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSN 735
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
IY+S+G W + + +M++ GV+K PG SWIE + ++H
Sbjct: 736 IYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVH 774
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 153/583 (26%), Positives = 250/583 (42%), Gaps = 102/583 (17%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHI 106
D S + N + EA+ + + T RP +A ++ A S L+ L+ G ++H
Sbjct: 62 DALRSRTRSNDFREAISTYIEM---TVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118
Query: 107 LSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+ +V + N ++NMYGKCG + D VFD + R+ VSW + IA + + A
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQA 178
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCC---VGLGRQLHAHVIKSEHGSHLISQNAL 222
+E + M + FT S+ ACS L + LG+QLH + ++ + NAL
Sbjct: 179 LEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRV-GDQKTFTNNAL 237
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
+AMY K R+ D+ +F S +D+ SW +MI FS+ D
Sbjct: 238 MAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSD--------------------- 276
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI------ 336
+EA++ F M + DG+T+ S+L AC+ L G +IH+Y+
Sbjct: 277 -------RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDL 329
Query: 337 IKKGFYSNVPV---CNA--------ILQHQAGELFRLFSLMLASQTK------------- 372
I+ F + V CN + H G L++ M++ +
Sbjct: 330 IENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIE 389
Query: 373 --------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
P+ T VM AC + +H Y +K G D +V N LMDMY + G
Sbjct: 390 MIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMG 449
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR---------------- 468
+ + +F+ ME D VSW+++I GY G AL L M+
Sbjct: 450 KMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDE 509
Query: 469 -SSGVRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARA 525
+PN +TL+ VL C+ + + +G ++ Y I I S +VD+ A+
Sbjct: 510 KGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITV---GSALVDMYAKC 566
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
G ++ + N+M + +++ W L+ +C HG G+ A E
Sbjct: 567 GCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGK---GEEALE 605
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 204/430 (47%), Gaps = 29/430 (6%)
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+ SW + +++ AI Y++M SG PD F F ++++A SGL + G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 202 QLHAHVIKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG---F 257
Q+HA +K +GS ++ N L+ MY K I D VF I +D SW S I F
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 258 SKLDFARTVFNEMESPNLA-SWNTIIAGVASCSN---------ANEAMSLFSEMGDRELI 307
K + A F M+ N+ S T+++ +CSN + +GD++
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTF 232
Query: 308 PDG--LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSL 365
+ + + + L +L++ S++ + N + + + E F L
Sbjct: 233 TNNALMAMYAKLGRVDDSKALFE-----SFVDRDMVSWNTMISSFSQSDRFSEALAFFRL 287
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCG 424
M+ + D +T V+ AC+ + L++G ++H Y+++ L + FV + L+DMY C
Sbjct: 288 MVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR 347
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVL 483
+ S R +F+ + + W+++I GYA+ G E+AL LF M + +G+ PN T+ V+
Sbjct: 348 QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVM 407
Query: 484 TACSHVGLV--EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
AC H +E + Y + + G R ++ ++D+ +R G++ +E + M
Sbjct: 408 PACVHCEAFSNKESIHGYAV---KLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR 464
Query: 542 DDIVVWKSLL 551
D V W +++
Sbjct: 465 DR-VSWNTMI 473
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/641 (30%), Positives = 326/641 (50%), Gaps = 74/641 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ + C +D A +V +S R +W+ + + L E + F ++ + +
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWN-AMLGGFAQNGLAQEVMEFFSCMKRHGP---Q 407
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T+ + SAC+SL L G ++H ++ +K + + N +++MY K G+L++AR
Sbjct: 408 PDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQ 467
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F+ M + VSW A+I G Q + A ++ +M+ +G++PD+ + SI+ AC+ + +
Sbjct: 468 FELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQEL 527
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+Q H ++K + + ++LI MY K +L A
Sbjct: 528 KRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA---------------------- 565
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
R VF M S N+ S N +IAG + + EA+ LF E+ L P +T LL
Sbjct: 566 ------RDVFYSMPSRNVVSVNALIAGY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLL 618
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVP-VCNAIL------------------------ 352
C L G QIH ++K GF S+ VC ++L
Sbjct: 619 DGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKG 678
Query: 353 -------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
Q+ + + + M + PD F V+ ACA M+SL+ G ++H
Sbjct: 679 LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHS 738
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGE 458
I TG +D + L+DMY KCG + + ++F M +V+SW+S+IVG A+ G E
Sbjct: 739 LIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAE 798
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EAL++F++M + P+ VT +GVL+ACSH G V EG +++ +M N Y + P + C+
Sbjct: 799 EALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCM 858
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VD+L R G ++EAE+FIN++ D ++W +LL +C+ HG+ GKRAA+ ++++ P +S
Sbjct: 859 VDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSS 918
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
++ VLL +IYA S W L MK +GV+K+PG SWIE
Sbjct: 919 SSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 249/534 (46%), Gaps = 76/534 (14%)
Query: 93 LRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM 152
L++L + +H L +L N I+++Y KCG+++ A+ F + +++V +W ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
++ +G ++ +V M + P++FTF ++ ACSGL V GRQ+H V K+
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---------- 262
G Q LI MY K + DA VF D SW ++I G+ + F
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233
Query: 263 ----------------------------ARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
AR +F ++ +PN+ +WN +I+G A A EA
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEA 293
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+S F E+ L ++ S+L A S L G +H+ K+G NV V +A++
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNM 353
Query: 355 QAG------------------------------------ELFRLFSLMLASQTKPDHITF 378
A E+ FS M +PD TF
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTF 413
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ ACA++ L G QLH ++K A ++FV N L+DMY K G+L AR+ F M+
Sbjct: 414 TSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKI 473
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D VSW+++IVGY Q +EA +FRRM S+GV P+ V+L +++AC++V ++ G Q
Sbjct: 474 HDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQC 533
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ ++ + G+ + S ++D+ + G V A D M ++V +L+A
Sbjct: 534 HCLLV-KVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP-SRNVVSVNALIA 585
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 269/558 (48%), Gaps = 85/558 (15%)
Query: 75 NFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N +RP+ T+A ++SACS L+ + GR+VH + + + +++MY KC L
Sbjct: 135 NHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLR 194
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
DAR+VFD + VSWTA+IAG ++G A++++ +M + G PDQ T +++ A
Sbjct: 195 DARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYV 254
Query: 193 GLCCVGLGRQLHA----------HVIKSEHGSHLISQNALIAMYTKFDRI-LDAW----- 236
L + R+L +V+ S H ++ A I+ + + + L A
Sbjct: 255 ALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEA-ISFFLELKKTGLKATRSSLG 313
Query: 237 NVFSSIARKDITSWGSMI------DGF-----------------SKLDFARTVFNEMESP 273
+V S+IA + ++GSM+ +G SK+D A+ VFN +
Sbjct: 314 SVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER 373
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
N+ WN ++ G A A E M FS M PD T S+ AC S L G Q+H
Sbjct: 374 NIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLH 433
Query: 334 SYIIKKGFYSNVPVCNAILQHQAG------------------------------------ 357
+ +IK F SN+ V NA++ A
Sbjct: 434 TVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYND 493
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E F +F M+++ PD ++ ++ ACA + L+ G Q HC ++K GL + L+
Sbjct: 494 EAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLI 553
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
DMYVKCG + +AR++F M +VVS ++LI GY G EEA+ LF+ ++ G++P V
Sbjct: 554 DMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTEV 612
Query: 478 TLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV--VDLLARAGRVHEAEDF 534
T G+L C ++ G Q++ ++M+ +G + + E CV + L + R ++E
Sbjct: 613 TFAGLLDGCDGAFMLNLGRQIHGQVMK--WGFLSSSE-MVCVSLLCLYMNSQRFVDSETL 669
Query: 535 INQMAFDDDIVVWKSLLA 552
+++ + +VVW +L++
Sbjct: 670 FSELQYPKGLVVWTALIS 687
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 244/536 (45%), Gaps = 66/536 (12%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+ E ++F T + S+ ++SA +SL L G VH + + +
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGS 348
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++NMY KC ++ A+ VF+ + +RN+V W AM+ G +QNG +E + M + G P
Sbjct: 349 ALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQP 408
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D+FTF SI AC+ L + G QLH +IK++ S+L NAL+ MY K + +A F
Sbjct: 409 DEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQF 468
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ D SW ++I G+ + ++ +EA +F
Sbjct: 469 ELMKIHDNVSWNAIIVGYVQEEY----------------------------NDEAFFMFR 500
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG------------------- 340
M ++PD +++ S++ AC + L +G Q H ++K G
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCG 560
Query: 341 --------FYS----NVPVCNAILQ-HQAGEL---FRLFSLMLASQTKPDHITFNDVMGA 384
FYS NV NA++ + G L LF + KP +TF ++
Sbjct: 561 VVLAARDVFYSMPSRNVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDG 620
Query: 385 CAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD-VV 442
C L +G Q+H +MK G L+ V L+ +Y+ + LF+ ++ P +V
Sbjct: 621 CDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLV 680
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W++LI GYAQ E+AL+ ++ MRS + P+ VL AC+ + ++ G +++ ++
Sbjct: 681 VWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLI 740
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G S ++D+ A+ G V + +M ++++ W S++ +G
Sbjct: 741 FHT-GFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNG 795
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 49/338 (14%)
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N I+ C N + A FS + +++ A S LS+Y +
Sbjct: 80 NVIVDLYVKCGNVDFAQKAFSRLEKKDVF-----------AWNSVLSMY---------LD 119
Query: 339 KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
G ++ V + F M + +P+ TF V+ AC+ + + G Q+H
Sbjct: 120 HGLFATV--------------VQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVH 165
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
C + KTG F GL+DMY KC L AR +F+ + D VSW++LI GY + G
Sbjct: 166 CGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPM 225
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA+K+F RM+ G P+ +TLV V+ A +G + + +L+ + N P + +
Sbjct: 226 EAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPN-----PNVVAWNVM 280
Query: 519 VDLLARAGRVHEAEDF---INQMAFDDDIVVWKSLLASCKTHGNVDVGK----RAAENIL 571
+ A+ G EA F + + S+L++ + ++ G +A + L
Sbjct: 281 ISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGL 340
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+ +ALV N+YA K + ++ S+ ER +
Sbjct: 341 DDNVYVGSALV---NMYAKCSKMDAAKQVFNSLGERNI 375
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 141/300 (47%), Gaps = 3/300 (1%)
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+DFA+ F+ +E ++ +WN++++ + F M + E+ P+ T +L A
Sbjct: 92 VDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSA 151
Query: 320 CTSPLSLYQGMQIHSYIIKKGF-YSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
C+ + G Q+H + K GF + + I + R L+ D +++
Sbjct: 152 CSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSW 211
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++ ++ + + G A D + +++ YV G L AR+LF + +
Sbjct: 212 TALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPN 271
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
P+VV+W+ +I G+A+ G EEA+ F ++ +G++ +L VL+A + + ++ G +
Sbjct: 272 PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMV 331
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ E G+ S +V++ A+ ++ A+ N + + +IV+W ++L +G
Sbjct: 332 HAQATKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG-ERNIVLWNAMLGGFAQNG 389
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 11/227 (4%)
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ +L +H +K G+ L + N ++D+YVKCG++ A++ F+ +E DV +W+S+
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY 506
+ Y G ++ F M + VRPN T VL+ACS + V G Q++ + + +
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 507 GIIPTRERRSC---VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
G R C ++D+ A+ + +A + A + D V W +L+A G
Sbjct: 174 GF-----RSFCQGGLIDMYAKCRYLRDAR-LVFDGALNLDTVSWTALIAGYVRDGFPMEA 227
Query: 564 KRAAENILKI-DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+ + + ++ + LV + N Y + G+ + +L + V
Sbjct: 228 VKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNV 274
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 321/565 (56%), Gaps = 47/565 (8%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P N +L Y K ++ A F++M +R+VVSW MIA SQ+G+ A+ L V+
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + G+ D T+ S + AC+ L +G G+QLHA VI+S +ALI +Y K
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTV--FNEMESPNLA----SWNTIIAG 284
+A VF+S+ ++ SW +I G + + F+++V FN+M + +A + T+I+G
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 285 -----------------VASCSN-----ANEAMSLFSEMGD---RELIPDGLTVRSLLCA 319
+ S N +N +SL+++ GD E + ++ R ++ +
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIV-S 439
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI---------LQHQAGE-LFRLFSLMLAS 369
TS ++ Y QI + I + F+ + NAI +QH A E +++S ML+
Sbjct: 440 WTSMITAYS--QIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497
Query: 370 Q-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ PD +T+ + CA + + ++G Q+ + +K GL L+V V N + MY KCG +
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A++LF+ + DVVSW+++I GY+Q G G++A K F M S G +P++++ V VL+ CSH
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLV+EG + +M +GI P E SC+VDLL RAG + EA+D I++M VW
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 677
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL++CK HGN ++ + AA+++ ++D +S + +LL IY+ +GK ++ A++ M+++G
Sbjct: 678 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 737
Query: 609 VRKVPGQSWIEIQTKIHA-SGNDIS 632
++K PG SW+E++ K+H +D+S
Sbjct: 738 IKKNPGYSWMEVENKVHVFKADDVS 762
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 238/531 (44%), Gaps = 77/531 (14%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P+ + HN ++N Y K GSL DA +FD MP+R+V SW +++G Q + +E +V
Sbjct: 68 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127
Query: 172 MLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M +SG +P+ FTF ++++C L C L QL K + + AL+ M+ +
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVAS 287
+ A +FS I R I SM+ G++KL D A F +M ++ SWN +IA ++
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
EA+ L EM + + D T S L AC SL G Q+H+ +I+ + V
Sbjct: 248 SGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYV 307
Query: 348 CNAILQ--------HQAGELF----------------------------RLFSLMLASQT 371
+A+++ +A +F LF+ M A
Sbjct: 308 ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 367
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
D ++ C L +G QLH +K+G + V N L+ +Y KCG L +A
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 427
Query: 432 LFNFMEDPDVVSWSSLIVGYAQF-------------------------------GCGEEA 460
+F+ M + D+VSW+S+I Y+Q G E+
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 487
Query: 461 LKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
LK++ M S V P+ VT V + C+ +G + G Q+ + G+I + +
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG-HTVKAGLILNVSVANAAI 546
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+ ++ GR+ EA+ + + D+V W +++ HG +GK+AA+
Sbjct: 547 TMYSKCGRISEAQKLFDLLN-GKDVVSWNAMITGYSQHG---MGKQAAKTF 593
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 222/463 (47%), Gaps = 51/463 (11%)
Query: 35 VDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
+D + F+D+ + D+ S +L + EAL + R+ +TY ++
Sbjct: 220 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL-GLVVEMHRKGVRLDSTTYTSSLT 278
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ L SL G+++H ++ S Q D + + ++ +Y KCGS ++A+ VF+ + RN VS
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WT +I G Q + ++EL+ QM + DQF ++I C + LGRQLH+ +
Sbjct: 339 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FART 265
KS H ++ N+LI++Y K + +A VFSS++ +DI SW SMI +S++ AR
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 458
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPL 324
F+ M + N +WN ++ + + ++S M +++ PD +T +L C
Sbjct: 459 FFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL-------------- 362
+ G QI + +K G NV V NA + +A +LF L
Sbjct: 519 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578
Query: 363 --------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT--GL 406
F ML+ KPD+I++ V+ C+ ++ G +L+ +M G+
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG-KLYFDMMTRVHGI 637
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + + ++D+ + G L A++L + M P W +L+
Sbjct: 638 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 114/234 (48%), Gaps = 14/234 (5%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L C+ + + +LG ++ H + + + + N + MY KCG + +A+ +FD +
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++VVSW AMI G SQ+G A + + ML G PD ++ +++ CS V G+
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625
Query: 202 QLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMI---- 254
L+ ++ HG L + ++ + + + +A ++ + K WG+++
Sbjct: 626 -LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACK 684
Query: 255 ----DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
D ++L A+ VF E++SP+ S+ + + ++++ + M D+
Sbjct: 685 IHGNDELAELA-AKHVF-ELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK 736
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 105/264 (39%), Gaps = 38/264 (14%)
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR--------- 430
D + +C + +L LH ++ GLA VF+ N L+ Y+ CG+L AR
Sbjct: 9 DALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKE 68
Query: 431 -----------------------ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
ELF+ M DV SW++L+ GY Q + L+ F M
Sbjct: 69 PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSM 128
Query: 468 RSSGVR-PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
SG PN T V+ +C +G E QL + ++ + + +VD+ R G
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFW-KFDFWGDPDVETALVDMFVRCG 187
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
V A +Q+ I S+LA +D A E + + + ++
Sbjct: 188 YVDFASRLFSQIE-RPTIFCRNSMLAGYAKLYGID---HAIEYFEDMAERDVVSWNMMIA 243
Query: 587 IYASSGKWEEVARLMGSMKERGVR 610
+ SG+ E L+ M +GVR
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVR 267
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 296/534 (55%), Gaps = 39/534 (7%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
++ AR VFD++P + + I S+ N A+ +V M Q+ + FT I ++
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ L + +G+Q+H+ VI+ S + QNALI Y K + + A +F I KD ++
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 251 GSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+I +S+ + AR +F++M ++ SWN +I+ A + ++ +F M D
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------- 353
P+ +T+ ++L C L G++I K SN+ V A+L+
Sbjct: 226 PNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLV 285
Query: 354 --HQA--------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
H A E LF M ++Q KP+ +T V+ ACA + S+
Sbjct: 286 FDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSV 345
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E G ++ Y+ GL +V+V + L+ MY KCG++ AR++F+ + D V+W+S+I+G
Sbjct: 346 ETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGL 405
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G E+A+ L+ RM+ V+PN++T VG++TAC+H G VE GL+ +R M++++ I P
Sbjct: 406 AINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPN 465
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E +C+VDL R+GR+ +A +FI +M + ++V+W +LL++ + H NV++ + A + +L
Sbjct: 466 IEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLL 525
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++P NS V+L NIYAS+G+W+E ++ MK++ V+K SW+E++ ++H
Sbjct: 526 ELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVH 579
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 132/558 (23%), Positives = 245/558 (43%), Gaps = 121/558 (21%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHIL-- 107
++ + +L NEAL F + N N RI T + +C+SL ++ +G++VH ++
Sbjct: 67 FITAYSRLSLNNEALRTFVSMHQN-NVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRY 125
Query: 108 ----SSKCQ-------------------------PDAVLHNHILNMYGKCGSLEDARMVF 138
S CQ D + +N +++ Y + G + AR +F
Sbjct: 126 GFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELF 185
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D+M R++VSW AMI+ +QNG + ++ +M P++ T +++ C+ L +
Sbjct: 186 DKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLE 245
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
+G ++ GS++I A++ MY K + D VF +AR+D+ +W +M
Sbjct: 246 MGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAM----- 300
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
IAG A +NEA+ LF M ++ P+ +T+ S+L
Sbjct: 301 -----------------------IAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLS 337
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELF---------- 360
AC S+ G +I SY+ +G SNV V +A+L +A ++F
Sbjct: 338 ACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVT 397
Query: 361 ------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
L++ M + KP++ITF +M AC +E+G + +
Sbjct: 398 WNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMR 457
Query: 403 KT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI--------VGYA 452
++ ++ ++D++ + G L A E ME +P+VV W +L+ V A
Sbjct: 458 SDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELA 517
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
+ G++ L+L +SG N+V L + + G +E L++ ++M+++ R
Sbjct: 518 ELA-GKKLLEL--EPDNSG---NYVILSNIYASA---GRWQEALKVRKLMKDK------R 562
Query: 513 ERRSCVVDLLARAGRVHE 530
+++ + RVH+
Sbjct: 563 VQKAAAYSWVEVEDRVHK 580
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 176/369 (47%), Gaps = 37/369 (10%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
A E+ D R W+ + S + Y++ + F +Q+ P+ T A ++S
Sbjct: 181 ARELFDKMRDRSIVSWN-AMISCYAQNGDYHKGWIIFQRMQDEM---CEPNEITLATVLS 236
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
C+ L L++G ++ + + ++ +L MY KCG+++D R+VFD M +R+VV+
Sbjct: 237 ICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVT 296
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W+AMIAG +QNG+ N A+EL+ M + + P+ T S++ AC+ L V G ++ ++V
Sbjct: 297 WSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVE 356
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
S++ +AL+ MY+K I+ A +F + ++D +W SMI G + FA
Sbjct: 357 SRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAE---- 412
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+A++L++ M + E+ P+ +T L+ ACT +
Sbjct: 413 ------------------------DAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVEL 448
Query: 329 GMQ-IHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
G++ S N+ C L ++G L + + + +P+ + + ++ A
Sbjct: 449 GLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSAS 508
Query: 386 AAMASLEMG 394
++E+
Sbjct: 509 RIHLNVELA 517
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 39/354 (11%)
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
S + +AR VF+++ P+ + I + S NEA+ F M + T+ +
Sbjct: 44 SFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIF 103
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
+C S L++ G Q+HS +I+ GF+S+V NA++ A
Sbjct: 104 KSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYA--------------------K 143
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
ND + S E+ I L D N L+ Y + G + +ARELF+ M
Sbjct: 144 IND-------LGSAEL-------IFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMR 189
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D +VSW+++I YAQ G + +F+RM+ PN +TL VL+ C+ +G +E GL+
Sbjct: 190 DRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLR 249
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ ++ N+ + + ++++ + G V + + MA D+V W +++A +
Sbjct: 250 IKKLNDNK-NLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMA-RRDVVTWSAMIAGYAQN 307
Query: 558 GNVDVGKRAAENI--LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
G + EN+ +I P N LV + + A G E R+ ++ RG+
Sbjct: 308 GRSNEALELFENMKSAQIKP-NDVTLVSVLSACAQLGSVETGERIGSYVESRGL 360
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 24/297 (8%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C +D V D RR W + + + NEAL + +N + +I+P+ T
Sbjct: 276 CGAVDDGRLVFDHMARRDVVTWS-AMIAGYAQNGRSNEAL---ELFENMKSAQIKPNDVT 331
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++SAC+ L S++ G ++ ++ S + + + +L MY KCG++ AR +FD++P
Sbjct: 332 LVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLP 391
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
QR+ V+W +MI G + NG AI LY +M + + P+ TF ++ AC+ V LG +
Sbjct: 392 QRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLE 451
Query: 203 LHAHVIKSEHGSHLISQN-----ALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSMIDG 256
+S H IS N ++ ++ + R++DA+ + ++ WG+++
Sbjct: 452 F----FRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSA 507
Query: 257 FSKL-------DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
S++ + A E+E N ++ + AS EA+ + M D+ +
Sbjct: 508 -SRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRV 563
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 321/565 (56%), Gaps = 47/565 (8%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P N +L Y K ++ A F++M +R+VVSW MIA SQ+G+ A+ L V+
Sbjct: 191 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 250
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + G+ D T+ S + AC+ L +G G+QLHA VI+S +ALI +Y K
Sbjct: 251 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 310
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTV--FNEMESPNLA----SWNTIIAG 284
+A VF+S+ ++ SW +I G + + F+++V FN+M + +A + T+I+G
Sbjct: 311 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 370
Query: 285 -----------------VASCSN-----ANEAMSLFSEMGD---RELIPDGLTVRSLLCA 319
+ S N +N +SL+++ GD E + ++ R ++ +
Sbjct: 371 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIV-S 429
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI---------LQHQAGE-LFRLFSLMLAS 369
TS ++ Y QI + I + F+ + NAI +QH A E +++S ML+
Sbjct: 430 WTSMITAYS--QIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
Query: 370 Q-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ PD +T+ + CA + + ++G Q+ + +K GL L+V V N + MY KCG +
Sbjct: 488 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 547
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A++LF+ + DVVSW+++I GY+Q G G++A K F M S G +P++++ V VL+ CSH
Sbjct: 548 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 607
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLV+EG + +M +GI P E SC+VDLL RAG + EA+D I++M VW
Sbjct: 608 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 667
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL++CK HGN ++ + AA+++ ++D +S + +LL IY+ +GK ++ A++ M+++G
Sbjct: 668 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 727
Query: 609 VRKVPGQSWIEIQTKIHA-SGNDIS 632
++K PG SW+E++ K+H +D+S
Sbjct: 728 IKKNPGYSWMEVENKVHVFKADDVS 752
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 222/463 (47%), Gaps = 51/463 (11%)
Query: 35 VDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
+D + F+D+ + D+ S +L + EAL + R+ +TY ++
Sbjct: 210 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL-GLVVEMHRKGVRLDSTTYTSSLT 268
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ L SL G+++H ++ S Q D + + ++ +Y KCGS ++A+ VF+ + RN VS
Sbjct: 269 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 328
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WT +I G Q + ++EL+ QM + DQF ++I C + LGRQLH+ +
Sbjct: 329 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 388
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FART 265
KS H ++ N+LI++Y K + +A VFSS++ +DI SW SMI +S++ AR
Sbjct: 389 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 448
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPL 324
F+ M + N +WN ++ + + ++S M +++ PD +T +L C
Sbjct: 449 FFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 508
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL-------------- 362
+ G QI + +K G NV V NA + +A +LF L
Sbjct: 509 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 568
Query: 363 --------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT--GL 406
F ML+ KPD+I++ V+ C+ ++ G +L+ +M G+
Sbjct: 569 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG-KLYFDMMTRVHGI 627
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + + ++D+ + G L A++L + M P W +L+
Sbjct: 628 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 670
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 221/495 (44%), Gaps = 93/495 (18%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-EMP 142
AD + +C S +L R +H +++ L N +L+ Y CG+L DAR + ++
Sbjct: 24 ADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIK 83
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ------SGLMPDQFTFGSIIRACSGLCC 196
+ NV++ M+ G ++ G + A EL+ +M + + LM D +C L C
Sbjct: 84 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGC 143
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
L QL + ++ KFD D D+ + +++D
Sbjct: 144 RELAPQL-------------------LGLFWKFDFWGD----------PDVET--ALVDM 172
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
F + +DFA +F+++E P + N+++AG A + A+ F +M +R+++ + +
Sbjct: 173 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMI 232
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKP 373
+L Q+G + L++ K
Sbjct: 233 AAL-------------------------------------SQSGRVREALGLVVEMHRKG 255
Query: 374 ---DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
D T+ + ACA + SL G QLH ++++ +D +V + L+++Y KCGS A+
Sbjct: 256 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 315
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
+FN ++D + VSW+ LI G Q+ C ++++LF +MR+ + + L +++ C +
Sbjct: 316 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 375
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVV-----DLLARAGRVHEAEDFINQMAFDDDIV 545
+ G QL+ + + + R+ VV L A+ G + AE + M+ + DIV
Sbjct: 376 DLCLGRQLHSL------CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIV 428
Query: 546 VWKSLLASCKTHGNV 560
W S++ + GN+
Sbjct: 429 SWTSMITAYSQIGNI 443
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 114/234 (48%), Gaps = 14/234 (5%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L C+ + + +LG ++ H + + + + N + MY KCG + +A+ +FD +
Sbjct: 496 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 555
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++VVSW AMI G SQ+G A + + ML G PD ++ +++ CS V G+
Sbjct: 556 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 615
Query: 202 QLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMI---- 254
L+ ++ HG L + ++ + + + +A ++ + K WG+++
Sbjct: 616 -LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACK 674
Query: 255 ----DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
D ++L A+ VF E++SP+ S+ + + ++++ + M D+
Sbjct: 675 IHGNDELAELA-AKHVF-ELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK 726
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 12/238 (5%)
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF-MED 438
D + +C + +L LH ++ GLA VF+ N L+ Y+ CG+L AR L +++
Sbjct: 25 DALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKE 84
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL------VGVLTACSHVGLV 492
P+V++ + ++ GYA+ G +A +LF RM V + + G +C +G
Sbjct: 85 PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCR 144
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E QL + ++ + + +VD+ R G V A +Q+ I S+LA
Sbjct: 145 ELAPQLLGLFW-KFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE-RPTIFCRNSMLA 202
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
+D A E + + + ++ + SG+ E L+ M +GVR
Sbjct: 203 GYAKLYGID---HAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 257
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/583 (31%), Positives = 300/583 (51%), Gaps = 65/583 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T ++ C+ +Q+G ++H + D ++N +++MY KCG L +A+M+FD+
Sbjct: 135 ATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK 194
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGL 199
++N VSW MI G G A L+ +M +Q + ++ T +I+ AC + +
Sbjct: 195 NNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRS 254
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
++LH + I+ + N +A Y K ++ A VF S
Sbjct: 255 LKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYS------------------ 296
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
ME+ + SWN +I G A + +A++L+ +M L+PD T+ SLL A
Sbjct: 297 ----------METKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLA 346
Query: 320 CTSPLSLYQGMQIHSYIIKKGFY--SNVPVCNAILQHQAGE------LFR---------- 361
SL G ++H ++++ G S + + L GE LF
Sbjct: 347 SAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSW 406
Query: 362 ------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
LF +++ +P I V+GAC+ ++L +G + HCY +K
Sbjct: 407 NAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALK 466
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
L DVFV +DMY K G + +R +F+ +++ D+ SW+++I Y G GEE+++L
Sbjct: 467 ALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIEL 526
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RMR G P+ T +G+LT CSH GLVEEGL+ + MQN +GI P E +CV+D+L
Sbjct: 527 FERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLG 586
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAGR+ +A +++M D VW SLL+ C+ G +++G+ AE +L+++P N V
Sbjct: 587 RAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVS 646
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L N+YA SG+W++V R+ +K+ G++K G SWIE+ K+H+
Sbjct: 647 LSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHS 689
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 149/563 (26%), Positives = 260/563 (46%), Gaps = 81/563 (14%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
+ LY++A+ F L +T F T+ +I AC+ LG +H ++ D
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-- 173
+ N ++ MYGK G ++ A VF MP RN+VSW ++I+G S+NG ++ V+M+
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ GL+PD T +++ C+ V +G ++H +K + N+L+ MY+K +
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLT 186
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+A +F RK+ SW NT+I G+ + E
Sbjct: 187 EAQMLFDKNNRKNAVSW----------------------------NTMIGGLCTKGYIFE 218
Query: 294 AMSLFSEMGDRELIP-DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
A +LF EM +E I + +TV ++L AC L ++H Y I+ GF + V N +
Sbjct: 219 AFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFV 278
Query: 353 QHQAG------------------------------------ELFRLFSLMLASQTKPDHI 376
A + L+ M S PD
Sbjct: 279 AAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWF 338
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T ++ A A + SL G ++H ++++ GL +D F+ L+ +Y+ CG SAR LF+ M
Sbjct: 339 TIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGM 398
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
E+ VSW+++I GY+Q G E+AL LFR++ S G +P+ + +V VL ACS + G
Sbjct: 399 EEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGK 458
Query: 497 QLY------RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
+ + +M++ + T +D+ A++G + E+ + + + D+ W ++
Sbjct: 459 ETHCYALKALLMEDVFVACST-------IDMYAKSGCIKESRSVFDGLK-NKDLASWNAI 510
Query: 551 LASCKTHGNVDVGKRAAENILKI 573
+A+ HG+ + E + K+
Sbjct: 511 IAAYGVHGDGEESIELFERMRKV 533
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 208/484 (42%), Gaps = 42/484 (8%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C L +A + D R+ W+ + LC + EA F +Q + +
Sbjct: 177 DMYSKCGYLTEAQMLFDKNNRKNAVSWN-TMIGGLCTKGYIFEAFNLFREMQMQEDIEVN 235
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T +++ AC + L+ +++H + + Q D ++ N + Y KCG L A VF
Sbjct: 236 EVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFY 295
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M + V SW A+I GC+QNG A+ LY+QM SGL+PD FT GS++ A + L +
Sbjct: 296 SMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRY 355
Query: 200 GRQLHAHVIKSEHGSHLIS--QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+++H V++ HG + S +L+++Y A +F + K SW +MI G+
Sbjct: 356 GKEVHGFVLR--HGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGY 413
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
S+ +A+ LF ++ P + V S+L
Sbjct: 414 SQNGLPE----------------------------DALILFRKLVSDGFQPSDIAVVSVL 445
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPV-CNAILQHQAGELFRLFSLMLASQTKPDHI 376
AC+ +L G + H Y +K +V V C+ I + + + D
Sbjct: 446 GACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLA 505
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
++N ++ A E +L + K G D F G++ + G + + FN M
Sbjct: 506 SWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEM 565
Query: 437 E-----DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
+ +P + ++ ++ + G ++AL+L M +P+ +L+ C + G
Sbjct: 566 QNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPE---QPDSRVWSSLLSFCRNFGE 622
Query: 492 VEEG 495
+E G
Sbjct: 623 LEIG 626
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 307/620 (49%), Gaps = 92/620 (14%)
Query: 99 GRKVHDHIL--SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
GR VH H++ + D N +LNMYGK G L AR +FD MP+RN+VS+ ++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
+Q G AA L+ ++ G +QF ++++ + GL +H+ K H +
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+ LI Y+ + DA +VF+ I RKD W +M+ +S+ D F +S +L
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLL 257
Query: 277 SWNTIIAGVASC------------------------------------------------ 288
+ + G+ C
Sbjct: 258 AISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMI 317
Query: 289 -----SNANE-AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
SN NE A LF + ++P+ ++ S+L ACT+ + L G QIH++ IK G
Sbjct: 318 SRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHE 377
Query: 343 SNVPVCNAILQ---------------------------------HQAG---ELFRLFSLM 366
S++ V NA++ Q+G E +F M
Sbjct: 378 SDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM 437
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
A+Q +T++ V+ ACA+ AS+ Q+HC I K+ D + N L+D Y KCG +
Sbjct: 438 QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYI 497
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A ++F + + D++SW+++I GYA G +AL+LF RM S V N +T V +L+ C
Sbjct: 498 RDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVC 557
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
GLV GL L+ M+ ++GI P+ E +C+V LL RAGR+++A FI + +V
Sbjct: 558 CSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMV 617
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W++LL+SC H NV +G+ +AE IL+I+P + VLL N+YA++G ++VA L SM+
Sbjct: 618 WRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRN 677
Query: 607 RGVRKVPGQSWIEIQTKIHA 626
GVRKVPG SW+EI+ +IHA
Sbjct: 678 IGVRKVPGLSWVEIKGEIHA 697
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 13/270 (4%)
Query: 42 FDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLG 99
+DD+ S Q+ NE AF+ + P+ Y+ ++ AC+++ L G
Sbjct: 307 YDDVILLSFMISRYAQSNQNEQ--AFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFG 364
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+++H+H + + D + N +++ Y KC ++ + +F + N VSW ++ G SQ+
Sbjct: 365 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 424
Query: 160 GQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G A+ ++ +M Q+ MP Q T+ S++RAC+ + Q+H + KS + +
Sbjct: 425 GLGEEALSVFCEM-QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 483
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNL 275
N+LI Y K I DA VF + +DI SW ++I G++ + A +F+ M N+
Sbjct: 484 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 543
Query: 276 ASWN-TIIAGVASCSNA---NEAMSLFSEM 301
S + T +A ++ C + N +SLF M
Sbjct: 544 ESNDITFVALLSVCCSTGLVNHGLSLFDSM 573
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 289/582 (49%), Gaps = 66/582 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +++++ +L+ G+ +H + S+ D ++ ++N Y KCGSL DAR VFD M
Sbjct: 12 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 71
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+V +W +MI+ S + + A ++ +M G D+ TF SI+ AC + G+
Sbjct: 72 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGK 131
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+ + ++ L ALI MY + +
Sbjct: 132 HVRESISETSFELDLFVGTALITMYARC----------------------------RSPE 163
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A VF M+ NL +W+ II A + EA+ F M ++P+ +T SLL T
Sbjct: 164 NAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 223
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAI------------------------------ 351
+P L + +IH I + G + NA+
Sbjct: 224 TPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAW 283
Query: 352 --------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
L ++ E + + D +TF V+ AC + SL G +H ++
Sbjct: 284 NVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 343
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
GL DV V N L +MY KCGS+ +AR +F+ M VSW+ ++ YAQ G EE LKL
Sbjct: 344 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL 403
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
R+M GV+ N +T V VL++CSH GL+ EG Q + + ++ GI E C+VDLL
Sbjct: 404 IRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLG 463
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG++ EAE +I++M + +IV W SLL +C+ H ++D GK AA +L++DP NS+A V+
Sbjct: 464 RAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVV 523
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L NIY+ G W+ A+L +M R V+KVPG S I+++ K+H
Sbjct: 524 LSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVH 565
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 179/415 (43%), Gaps = 25/415 (6%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
ML G+ + TF +++ + + G+ +H+ V +SEH + AL+ YTK
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF-------NEMESPNLASWNTIIAG 284
+ DA VF + + + +W SMI +S + + F +E E + ++ +I+
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 285 VASCSNANEAMSLFSEMGDRELIPD---GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
+ N + + + D G + ++ C SP Q+ + +K
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSP---ENAAQVFGRMKQKNL 177
Query: 342 YSNVPVCNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ + A H GE R F +M P+ +TF ++ + LE +++H
Sbjct: 178 ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 237
Query: 401 IMKTGLALDVFVMNGLMDMYVKC--GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
I + GL + N L+++Y +C G L A + M++ + +W+ LI GY G
Sbjct: 238 ITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSR 297
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EAL+ ++R++ + + VT + VL AC+ + EG ++ E G+ ++ +
Sbjct: 298 EALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHS-NAVECGLDSDVIVKNAL 356
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
++ ++ G + A + M V W +L + HG +E +LK+
Sbjct: 357 TNMYSKCGSMENARRIFDSMPI-RSAVSWNGMLQAYAQHGE-------SEEVLKL 403
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 11/249 (4%)
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
ML K + ITF +V+ + +L G +H + ++ +LDVFV L++ Y KCGS
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
L AR++F+ M V +W+S+I Y+ EA +F+RM+ G R + VT + +L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C + ++ G + R +E + ++ + AR A +M +++
Sbjct: 121 CVNPENLQHGKHV-RESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMK-QKNLI 178
Query: 546 VWKSLLASCKTHGNVDVGKR-----AAENILKIDPTNSAALVLLCNIYASSGKWEEVARL 600
W +++ + HG+ R E IL N + L N + + EE++R+
Sbjct: 179 TWSAIITAFADHGHCGEALRYFRMMQQEGIL----PNRVTFISLLNGFTTPSGLEELSRI 234
Query: 601 MGSMKERGV 609
+ E G+
Sbjct: 235 HLLITEHGL 243
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 298/582 (51%), Gaps = 73/582 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y L+ C + +++ H+ QP D+ LHN +L++Y K G L DA+ +FD+M
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84
Query: 142 PQRNVVSWTAM-------------------------------IAGCSQNGQENAAIELYV 170
+R++ SW A+ IAG S N ++EL+
Sbjct: 85 LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M + G P ++T SI+ A + L + G+Q+H +I ++ NAL MY K
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES-------PNLASWNTIIA 283
I A +F + +K++ SW MI G++K + P+ + +TIIA
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
C +EA +FSE +++++ C + + + G+
Sbjct: 265 AYCQCGRVDEARRVFSEFKEKDIV------------CWTAMMV-------------GYAK 299
Query: 344 NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
N +A+L LF+ ML +PD T + V+ +CA +ASL G +H +
Sbjct: 300 NGREEDALL---------LFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
GL ++ V + L+DMY KCG + AR +FN M +VVSW+++IVG AQ G ++AL+L
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALEL 410
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M +P++VT +G+L+AC H +E+G + + + N++G+ PT + +C+V+LL
Sbjct: 411 FENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLG 470
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
R GR+ +A I MA D D ++W +LL+ C T G++ + AA ++ ++DPT + ++
Sbjct: 471 RTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIM 530
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N+YAS G+W++VA + MK + V+K G SWIEI ++H
Sbjct: 531 LSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVH 572
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 175/425 (41%), Gaps = 102/425 (24%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
E+L F +Q F T +++A + L L+ G+++H I+ + + N +
Sbjct: 138 ESLELFKRMQRE-GFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNAL 196
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
+MY KCG +E AR +FD + ++N+VSW MI+G ++NGQ I L QM SG MPDQ
Sbjct: 197 TDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQ 256
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T +I IA Y + R+ +A VFS
Sbjct: 257 VTMSTI-----------------------------------IAAYCQCGRVDEARRVFSE 281
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
KDI W +M+ G++K N E +A+ LF+EM
Sbjct: 282 FKEKDIVCWTAMMVGYAK--------NGREE--------------------DALLLFNEM 313
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------- 353
+ PD T+ S++ +C SL+ G +H I G +N+ V +A++
Sbjct: 314 LLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFI 373
Query: 354 HQAGELFRL----------------------------FSLMLASQTKPDHITFNDVMGAC 385
A +F L F ML + KPD++TF ++ AC
Sbjct: 374 DDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSAC 433
Query: 386 AAMASLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPDVVS 443
+E G + I + G+ + ++++ + G + A L N DPD +
Sbjct: 434 LHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLI 493
Query: 444 WSSLI 448
WS+L+
Sbjct: 494 WSTLL 498
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFD--FLQNNTNFRI 78
A+ C +D+A V F + W + K +AL+ F+ L++ I
Sbjct: 265 AYCQCGRVDEARRVFSEFKEKDIVCWT-AMMVGYAKNGREEDALLLFNEMLLEH-----I 318
Query: 79 RPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P +Y + ++S+C+ L SL G+ VH + + + ++ + +++MY KCG ++DAR
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ MP RNVVSW AMI GC+QNG + A+EL+ MLQ PD TF I+ AC
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438
Query: 197 VGLGRQLHAHVIKSEHG 213
+ G++ + I ++HG
Sbjct: 439 IEQGQE-YFDSITNQHG 454
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 321/565 (56%), Gaps = 47/565 (8%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P N +L Y K ++ A F++M +R+VVSW MIA SQ+G+ A+ L V+
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + G+ D T+ S + AC+ L +G G+QLHA VI+S +ALI +Y K
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTV--FNEMESPNLA----SWNTIIAG 284
+A VF+S+ ++ SW +I G + + F+++V FN+M + +A + T+I+G
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 285 -----------------VASCSN-----ANEAMSLFSEMGD---RELIPDGLTVRSLLCA 319
+ S N +N +SL+++ GD E + ++ R ++ +
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIV-S 439
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI---------LQHQAGE-LFRLFSLMLAS 369
TS ++ Y QI + I + F+ + NAI +QH A E +++S ML+
Sbjct: 440 WTSMITAYS--QIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497
Query: 370 Q-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ PD +T+ + CA + + ++G Q+ + +K GL L+V V N + MY KCG +
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A++LF+ + DVVSW+++I GY+Q G G++A K F M S G +P++++ V VL+ CSH
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLV+EG + +M +GI P E SC+VDLL RAG + EA+D I++M VW
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 677
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL++CK HGN ++ + AA+++ ++D +S + +LL IY+ +GK ++ A++ M+++G
Sbjct: 678 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 737
Query: 609 VRKVPGQSWIEIQTKIHA-SGNDIS 632
++K PG SW+E++ K+H +D+S
Sbjct: 738 IKKNPGYSWMEVENKVHVFKADDVS 762
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 238/531 (44%), Gaps = 77/531 (14%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P+ + HN ++N Y K GSL DA +FD MP+R+V SW +++G Q + +E +V
Sbjct: 68 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127
Query: 172 MLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M +SG +P+ FTF ++++C L C L QL K + + AL+ M+ +
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVAS 287
+ A +FS I R I SM+ G++KL D A F +M ++ SWN +IA ++
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
EA+ L EM + + D T S L AC SL G Q+H+ +I+ + V
Sbjct: 248 SGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYV 307
Query: 348 CNAILQ--------HQAGELF----------------------------RLFSLMLASQT 371
+A+++ +A +F LF+ M A
Sbjct: 308 ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 367
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
D ++ C L +G QLH +K+G + V N L+ +Y KCG L +A
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 427
Query: 432 LFNFMEDPDVVSWSSLIVGYAQF-------------------------------GCGEEA 460
+F+ M + D+VSW+S+I Y+Q G E+
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDG 487
Query: 461 LKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
LK++ M S V P+ VT V + C+ +G + G Q+ + G+I + +
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG-HTVKAGLILNVSVANAAI 546
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+ ++ GR+ EA+ + + D+V W +++ HG +GK+AA+
Sbjct: 547 TMYSKCGRISEAQKLFDLLN-GKDVVSWNAMITGYSQHG---MGKQAAKTF 593
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 223/463 (48%), Gaps = 51/463 (11%)
Query: 35 VDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
+D + F+D+ + D+ S +L + EAL + R+ +TY ++
Sbjct: 220 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL-GLVVEMHRKGVRLDSTTYTSSLT 278
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ L SL G+++H ++ S Q D + + ++ +Y KCGS ++A+ VF+ + RN VS
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WT +I G Q + ++EL+ QM + DQF ++I C + LGRQLH+ +
Sbjct: 339 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FART 265
KS H ++ N+LI++Y K + +A VFSS++ +DI SW SMI +S++ AR
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 458
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPL 324
F+ M++ N +WN ++ + + ++S M +++ PD +T +L C
Sbjct: 459 FFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL-------------- 362
+ G QI + +K G NV V NA + +A +LF L
Sbjct: 519 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578
Query: 363 --------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT--GL 406
F ML+ KPD+I++ V+ C+ ++ G +L+ +M G+
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG-KLYFDMMTRVHGI 637
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ + + ++D+ + G L A++L + M P W +L+
Sbjct: 638 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 114/234 (48%), Gaps = 14/234 (5%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L C+ + + +LG ++ H + + + + N + MY KCG + +A+ +FD +
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++VVSW AMI G SQ+G A + + ML G PD ++ +++ CS V G+
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625
Query: 202 QLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMI---- 254
L+ ++ HG L + ++ + + + +A ++ + K WG+++
Sbjct: 626 -LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACK 684
Query: 255 ----DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
D ++L A+ VF E++SP+ S+ + + ++++ + M D+
Sbjct: 685 IHGNDELAELA-AKHVF-ELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK 736
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 104/264 (39%), Gaps = 38/264 (14%)
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR--------- 430
D + +C + +L LH ++ GLA VF+ N L+ Y CG+L AR
Sbjct: 9 DALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKE 68
Query: 431 -----------------------ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
ELF+ M DV SW++L+ GY Q + L+ F M
Sbjct: 69 PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSM 128
Query: 468 RSSGVR-PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
SG PN T V+ +C +G E QL + ++ + + +VD+ R G
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFW-KFDFWGDPDVETALVDMFVRCG 187
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
V A +Q+ I S+LA +D A E + + + ++
Sbjct: 188 YVDFASRLFSQIE-RPTIFCRNSMLAGYAKLYGID---HAIEYFEDMAERDVVSWNMMIA 243
Query: 587 IYASSGKWEEVARLMGSMKERGVR 610
+ SG+ E L+ M +GVR
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVR 267
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 320/621 (51%), Gaps = 75/621 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRK----VHDH 105
L L +Q+ EA F +++ I + L+S + +L+ G++ VH +
Sbjct: 423 LMVGLARQHQGEEAAKVFKEMKDLV--EINSESLVVLLSTFTEFSNLKEGKRKGQEVHAY 480
Query: 106 ILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ S + + N ++NMYGKC ++++A VF MP ++ VSW +MI+G N +
Sbjct: 481 LFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEE 540
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A+ + M ++G++P F+ S + +CS L + LGRQ+H K + NAL+
Sbjct: 541 AVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLT 600
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
+Y + D I + + VF +M + SWN+ I
Sbjct: 601 LYAETDSINEC----------------------------QKVFFQMPEYDQVSWNSFIGA 632
Query: 285 VASC-SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
+A ++ +A+ F EM P+ +T ++L A +S L G QIH+ I+K
Sbjct: 633 LAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVAD 692
Query: 344 NVPVCNAILQH----------------------------------QAGELFRLFSL---M 366
+ + NA+L +G L + L M
Sbjct: 693 DNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPM 752
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+ K D TF V+ ACA++A+LE G ++H ++ L DV V + L+DMY KCG +
Sbjct: 753 MQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKI 812
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A F M ++ SW+S+I GYA+ G G++ALK+F RM+ G P+HVT VGVL+AC
Sbjct: 813 DYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSAC 872
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SHVGLV+EG + ++ M YG+ P E SC+VDLL RAG V + EDFI M D +I++
Sbjct: 873 SHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILI 932
Query: 547 WKSLL-ASCKTHG-NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
W+++L A C+ +G N ++G+RAA+ +++++P N+ VLL N++A+ G WE+V +M
Sbjct: 933 WRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAM 992
Query: 605 KERGVRKVPGQSWIEIQTKIH 625
++ V+K G SW+ ++ +H
Sbjct: 993 RKAAVKKDAGCSWVNMKDGVH 1013
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 252/538 (46%), Gaps = 43/538 (7%)
Query: 47 DFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHI 106
DF +S L N+ + FL++ T + + SL +H +
Sbjct: 107 DFPEMASHLFMRLLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDANHLHLQL 166
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ D N ++N+Y + G+L AR +FDEMPQ+N+VSW+ +I+G +QN + A
Sbjct: 167 YKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEAC 226
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACS--GLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
L+ ++ SGL+P+ F GS +RAC G + LG Q+HA + K S +I N L++
Sbjct: 227 SLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMS 286
Query: 225 MYTKFD-RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN-----EMES------ 272
MY+ I DA VF I ++ +W S+I + + A + F +ME
Sbjct: 287 MYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLR 346
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC--ACTSPLSLYQGM 330
PN + +++ A+CS A+ + L +M R I +R L A + + Y M
Sbjct: 347 PNEYTLCSLV--TAACSLADCGLVLLEQMLTR--IEKSGFLRDLYVGSALVNGFARYGLM 402
Query: 331 QIHSYIIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFND----- 380
I K+ + N N ++ QHQ E ++F M D + N
Sbjct: 403 DCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM------KDLVEINSESLVV 456
Query: 381 VMGACAAMASLE----MGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCGSLGSARELFNF 435
++ ++L+ G ++H Y+ ++GL + + N L++MY KC ++ +A +F
Sbjct: 457 LLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQL 516
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M D VSW+S+I G EEA+ F M+ +G+ P++ +++ L++CS +G + G
Sbjct: 517 MPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 576
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
Q++ ++G+ + ++ L A ++E + QM + D V W S + +
Sbjct: 577 RQIHG-EGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 212/467 (45%), Gaps = 76/467 (16%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C +D A V + W+ + S L + EA+ F ++ N + PS ++
Sbjct: 504 CTAIDNACSVFQLMPSKDTVSWN-SMISGLDHNERFEEAVSCFHTMKRNG---MVPSNFS 559
Query: 85 --DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+S+CSSL L LGR++H D + N +L +Y + S+ + + VF +MP
Sbjct: 560 VISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 619
Query: 143 QRNVVSWTAMIAGCSQ-NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ + VSW + I ++ A++ +++M+Q+G P++ TF +I+ A S +GLG
Sbjct: 620 EYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGH 679
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDGFSKL 260
Q+HA ++K +NAL+A Y K +++ D +FS ++ R+D SW SMI G+
Sbjct: 680 QIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGY--- 736
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ +G+ ++AM L M R DG T ++L AC
Sbjct: 737 --------------------LHSGI-----LHKAMDLVWPMMQRGQKLDGFTFATVLSAC 771
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
S +L +GM++H+ ++ S+V V +A++
Sbjct: 772 ASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWN 831
Query: 353 -------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+H G+ ++F+ M PDH+TF V+ AC+ + ++ G + H M
Sbjct: 832 SMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYK-HFKSMGE 890
Query: 405 --GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
GL+ + + ++D+ + G + + M DP+++ W +++
Sbjct: 891 VYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVL 937
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 328/654 (50%), Gaps = 79/654 (12%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNT 74
A L + G V D+ + FD + + D + S Q + ++ + F ++++
Sbjct: 183 ANSLITMFGNLGRVHDA-EKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH- 240
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
R +T L+S C+S G +H L S + N ++NMY G L DA
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+F M +R+++SW MI+ QN A++ Q+ + P+ TF S + ACS
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSP 360
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+ +HA V++ +L+ N+LI MY K + + DA VF S+ DI S
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS----- 415
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+N +I G A + +AM +FS M + P+ +T+
Sbjct: 416 -----------------------YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMI 452
Query: 315 SLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQHQAG---------------- 357
++ + S L+ G +H+YII+ GF S+ V N+++ A
Sbjct: 453 NIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITN 512
Query: 358 --------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
E +LF M + K D + + + +CA++ASLE G QL
Sbjct: 513 KNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQL 572
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS---WSSLIVGYAQF 454
H MK+GL D +V+N MDMY KCG + E+ + D + W++LI GYA++
Sbjct: 573 HGLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQQCWNTLISGYAKY 629
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G +EA + F++M ++G +P++VT V +L+ACSH GLV++G+ Y M + +G+ P +
Sbjct: 630 GYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 689
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
C+VDLL R GR EAE FI +M + ++W+SLL+S +TH N+++G++ A+ +L++D
Sbjct: 690 CVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELD 749
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
P + +A VLL N+YA++ +W +V +L MK + K P SW++++ ++ G
Sbjct: 750 PFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFG 803
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/584 (26%), Positives = 268/584 (45%), Gaps = 99/584 (16%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L +L EAL A+ ++ + + +A ++S C SL + G +V ++ S
Sbjct: 116 LMVALSSNGYLEEALRAYRQMRRD-GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVS 174
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
Q + N ++ M+G G + DA +FD M + + +SW AMI+ S G + ++
Sbjct: 175 GLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVF 234
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M GL PD T S++ C+ G +H+ ++S S + NAL+ MY+
Sbjct: 235 SDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAA 294
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
++ DA +F +++R+D+ SW +MI + V +C
Sbjct: 295 GKLSDAEFLFWNMSRRDLISWNTMISSY---------------------------VQNC- 326
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
N+ +A+ ++ P+ LT S L AC+SP +L G +H+ +++ N+ V N
Sbjct: 327 NSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGN 386
Query: 350 AILQ--------HQAGELF----------------------------RLFSLMLASQTKP 373
+++ A ++F ++FS M ++ KP
Sbjct: 387 SLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKP 446
Query: 374 DHITFNDVMGACAAMASLE-MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
++IT ++ G+ A+ L G LH YI++TG D +V N L+ MY KCG+L S+ +
Sbjct: 447 NYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNI 506
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
FN + + ++VSW+++I Q G GEEALKLF M+ +G + + V L L++C+ + +
Sbjct: 507 FNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASL 566
Query: 493 EEGLQLYRI---------------MQNEYG----------IIPTRERR-----SCVVDLL 522
EEG+QL+ + + YG ++P + R + ++
Sbjct: 567 EEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGY 626
Query: 523 ARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVG 563
A+ G EAE+ QM D V + +LL++C G VD G
Sbjct: 627 AKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 670
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 235/532 (44%), Gaps = 81/532 (15%)
Query: 84 ADLISACSSL---RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
A L++AC + G +H + + + +L++YG G + DA+ +F E
Sbjct: 45 ASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWE 104
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RNVVSWTA++ S NG A+ Y QM + G+ + F +++ C L G
Sbjct: 105 MPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPG 164
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+ + VI S + + N+LI M+ R+ DA +F + D SW +MI +S
Sbjct: 165 LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQ 224
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
F +FS+M L PD T+ SL+ C
Sbjct: 225 GICSKCF----------------------------LVFSDMRHHGLRPDATTLCSLMSVC 256
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL------------------- 359
S G IHS ++ S+V V NA++ AG+L
Sbjct: 257 ASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWN 316
Query: 360 ---------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ + + P+H+TF+ +GAC++ +L G +H +++
Sbjct: 317 TMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQL 376
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L ++ V N L+ MY KC S+ A ++F M D+VS++ LI GYA G +A+++F
Sbjct: 377 SLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVF 436
Query: 465 RRMRSSGVRPNHVTLV---GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
MRS+G++PN++T++ G + + + L Y I G + + ++ +
Sbjct: 437 SWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYII---RTGFLSDEYVANSLITM 493
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
A+ G + + + N + + +IV W +++A+ NV +G E LK+
Sbjct: 494 YAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA-----NVQLGH--GEEALKL 537
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 205/649 (31%), Positives = 324/649 (49%), Gaps = 80/649 (12%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYAD 85
L A + DS ++R W L + N + L AF+ + + P T A
Sbjct: 89 LSTARSLFDSMVQRSVVTWTM-LIGGYAQHNRF---LEAFNLFADMCRHGMVPDHITLAT 144
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+S + S+ +VH H++ ++ N +L+ Y K SL A +F M +++
Sbjct: 145 LLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKD 204
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V++ A++ G S+ G + AI L+ +M G P +FTF +++ A + + G+Q+H+
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
V+K ++ NAL+ Y+K DRI++A R
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEA----------------------------RK 296
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG----DRELIPDGLTVRSLLCACT 321
+F EM + S+N +I A E++ LF E+ DR P +LL
Sbjct: 297 LFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFP----FATLLSIAA 352
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKP--- 373
+ L+L G QIHS I S V V N+++ A GE R+F+ + + P
Sbjct: 353 NSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTA 412
Query: 374 ----------------------------DHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
D T+ ++ ACA +ASL +G QLH I+++G
Sbjct: 413 LISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSG 472
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+VF + L+DMY KCGS+ A ++F M + VSW++LI YAQ G G AL+ F
Sbjct: 473 CLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFE 532
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M SG++PN V+ + +L ACSH GLVEEGLQ + M Y + P RE + +VD+L R+
Sbjct: 533 QMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRS 592
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA-LVLL 584
GR EAE + +M F+ D ++W S+L SC+ H N ++ +AA+ + + AA V +
Sbjct: 593 GRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSM 652
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGNDIS 632
NIYA++G+W+ V ++ +++ERG+RKVP SW+EI+ K H S ND S
Sbjct: 653 SNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTS 701
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 234/506 (46%), Gaps = 70/506 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N ++ Y K G+L AR +FD M QR+VV+WT +I G +Q+ + A L+ M + G++
Sbjct: 77 NTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMV 136
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD T +++ + V Q+H HV+K + S L+ N+L+ Y K + A ++
Sbjct: 137 PDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHL 196
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F +A KD ++ +++ G+SK F ++A++LF
Sbjct: 197 FKHMAEKDNVTFNALLTGYSKEGF----------------------------NHDAINLF 228
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----QH 354
+M D P T ++L A + G Q+HS+++K F NV V NA+L +H
Sbjct: 229 FKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKH 288
Query: 355 ----QAGELF----------------------------RLFSLMLASQTKPDHITFNDVM 382
+A +LF LF + ++ F ++
Sbjct: 289 DRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLL 348
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A +LEMG Q+H + T +V V N L+DMY KC G A +F + V
Sbjct: 349 SIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSV 408
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RI 501
W++LI GY Q G E+ LKLF M + + + T +L AC+++ + G QL+ RI
Sbjct: 409 PWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRI 468
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+++ G + S +VD+ A+ G + EA +M + V W +L+++ +G+
Sbjct: 469 IRS--GCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNS-VSWNALISAYAQNGDGG 525
Query: 562 VGKRAAENILK--IDPTNSAALVLLC 585
R+ E ++ + P + + L +LC
Sbjct: 526 HALRSFEQMIHSGLQPNSVSFLSILC 551
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+V N ++ Y+K G+L +AR LF+ M VV+W+ LI GYAQ EA LF M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
G+ P+H+TL +L+ + V E Q++
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVH 162
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 305/602 (50%), Gaps = 67/602 (11%)
Query: 65 VAFDFLQN--NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
A +FL++ F + ++ ++ + + +++G++VH ++ + + + +L
Sbjct: 83 TALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALL 142
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+MY KC +EDA VF + RN V+W A+I+G +Q G A L M G+ D
Sbjct: 143 DMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDG 202
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TF ++ L Q+HA ++K S NA+I Y++ I DA VF
Sbjct: 203 TFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF--- 259
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
DG +E+ +L +WN+++A + EA LF EM
Sbjct: 260 ------------DG------------AIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQ 295
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
PD T S++ A QG +H +IK+G VP+ N+++
Sbjct: 296 VLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKS 355
Query: 354 --------------------------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGA 384
Q+G + + F M + DH F+ V+ +
Sbjct: 356 MDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRS 415
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
C+ +A+L++G Q+H ++K+G + FV + L+ MY KCG + AR+ F+ ++W
Sbjct: 416 CSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAW 475
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+SLI GYAQ G G+ AL LF M+ V+ +H+T V VLTACSH+GLVEEG + M++
Sbjct: 476 NSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMES 535
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+YGI P E +C++DLL RAGR+ EA+ I M F+ D +VWK+LL +C+T G++++
Sbjct: 536 DYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELAS 595
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
+ A ++L+++P VLL +++ +W E A + MKERGV+KVPG SWIE++ ++
Sbjct: 596 QVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEV 655
Query: 625 HA 626
+
Sbjct: 656 RS 657
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 244/537 (45%), Gaps = 81/537 (15%)
Query: 98 LGRKVHDHILSSKCQPDAVLH--NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L R +H L+ K A ++ N+I++ Y KCG + A +F E QR+ VSW MIAG
Sbjct: 15 LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG---LGRQLHAHVIKSEH 212
G A+E M + G D ++FGSI++ G+ CVG +G+Q+H+ ++K +
Sbjct: 75 FVNLGNFETALEFLKSMKRYGFAVDGYSFGSILK---GVACVGYVEVGQQVHSMMVKMGY 131
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
++ + +AL+ MY K +R+ DA+ VF SI ++ +W ++I G++++ T F ++
Sbjct: 132 EGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC 191
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
L GV I DG T LL P Q+
Sbjct: 192 MEL-------EGVE--------------------IDDG-TFAPLLTLLDDPDLHKLTTQV 223
Query: 333 HSYIIKKGFYSNVPVCNAIL-------------------------------------QHQ 355
H+ I+K G S+ VCNAI+ +Q
Sbjct: 224 HAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQ 283
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
E F+LF M +PD T+ V+ A + G LH ++K GL V + N
Sbjct: 284 EEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNS 343
Query: 416 LMDMYVK--CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
L+ MY+K S+ A +F +E+ D VSW+S++ G++Q G E+ALK F MRS V
Sbjct: 344 LIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVV 403
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+H VL +CS + ++ G Q++ ++ + G P S ++ + ++ G + +A
Sbjct: 404 IDHYAFSAVLRSCSDLATLQLGQQVH-VLVLKSGFEPNGFVASSLIFMYSKCGVIEDARK 462
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCN 586
+ D I W SL+ HG +D+ + +K+D A++ C+
Sbjct: 463 SFDATPKDSSI-AWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACS 518
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 297/528 (56%), Gaps = 22/528 (4%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
++ + + V N +++ Y K + +AR FD MP+RNVVSWTAM+ G Q G +
Sbjct: 68 YLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSE 127
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A L+ QM + ++ G +I+ GL +K ++++ +I+
Sbjct: 128 AETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGL---FDIMPVKD-----VVARTNMIS 179
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTI 281
Y + R+ +A +F + R+++ SW +MI G+ ++D AR +F M N SW +
Sbjct: 180 GYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAM 239
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-- 339
+ G EA LF M + ++ +++ + + Q+ I +K
Sbjct: 240 LMGYTQGGRIEEASELFDAMPVKAVV----ACNAMILGFGQNGEVAKARQVFDQIREKDD 295
Query: 340 GFYSNVPVCNAILQHQAGEL--FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
G +S + + + + E+ LF+LM + + + V+ CA++ASL+ G Q+
Sbjct: 296 GTWSAMI---KVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQV 352
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H ++K+ DVFV + L+ MYVKCG L AR++F+ D+V W+S+I GYAQ G
Sbjct: 353 HAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLV 412
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
EEAL++F M SSG+ + VT VGVL+ACS+ G V+EGL+++ M+++Y + P E +C
Sbjct: 413 EEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYAC 472
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+VDLL RAG V++A D I +M + D ++W +LL +C+TH N+++ + AA+ +L+++P N
Sbjct: 473 MVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKN 532
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ +LL NIYAS G+W +VA L +M+ + V K PG SWIE++ ++H
Sbjct: 533 AGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVH 580
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQN---NTNFRIRPSTYADL 86
+A +V D + D W + ++ EAL F +Q +NF PS + +
Sbjct: 282 KARQVFDQIREKDDGTWS-AMIKVYERKGFEVEALNLFALMQREGVQSNF---PSLIS-V 336
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+S C+SL SL GR+VH ++ S+ D + + ++ MY KCG L AR +FD +++
Sbjct: 337 LSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDI 396
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
V W ++I G +Q+G A++++ +M SG+ D TF ++ ACS
Sbjct: 397 VMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACS 442
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 91/223 (40%), Gaps = 22/223 (9%)
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
M SL M + +C T +A+ N + Y + G + SAR +F+ M D +VSW+S+
Sbjct: 1 MQSLLMPCRRYC----TSVAI---AYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSM 53
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
+ GY Q EA LF +M N V+ G+++ +V E + + M
Sbjct: 54 VAGYFQNNRPREARYLFDKMPER----NTVSWNGLISGYVKNRMVSEARKAFDTMPERNV 109
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
+ T R V + G V EAE QM + ++V W +L +D A
Sbjct: 110 VSWTAMVRGYV-----QEGLVSEAETLFWQMP-EKNVVSWTVMLGGLIQVRRID----EA 159
Query: 568 ENILKIDPTNS-AALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+ I P A + + Y G+ E L M R V
Sbjct: 160 RGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNV 202
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 299/573 (52%), Gaps = 68/573 (11%)
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
SSLR+ + + K + +L +++ Y + G +E+AR +FDEMP+R+VV+WT
Sbjct: 21 SSLRNACVESSQNTESPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWT 80
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
AMI G + + + A E + +M + G P++FT S++++C + + G +H V+K
Sbjct: 81 AMITGYASSNYNSCAWECFHEMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL 140
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
L NAL+ MY ++A A +F ++
Sbjct: 141 GMEGSLYVDNALMNMYATCSVTMEA---------------------------AFLIFRDI 173
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ N +W T+I G + + ++ +M + ++ P +T+ + A S S+
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITI--AVRASASIDSVTT 231
Query: 329 GMQIHSYIIKKGFYSNVPVCNAIL-----------------------------------Q 353
G QIH+ ++K+GF SN+PV N+IL +
Sbjct: 232 GKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISELER 291
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
+ E +F + P+ TF ++ ACA +A+L G QLH I + G +V +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELA 351
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+DMY KCG + + +F +E+ ++VSW+S+++GY G G EA++LF +M SSG+
Sbjct: 352 NALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
RP+ + + VL+AC H GLVE+GL+ + +M++EYGI P R+ +CVVDLL RAG++ EA
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR-AAENILKIDPTNSAALVLLCNIYASS 591
+ + +M F D W ++L +CK H + + R AA+ ++++ P V+L IYA+
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLSYIYAAE 531
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
GKW E AR+ M+ G +K G SWIE++ ++
Sbjct: 532 GKWVEFARVRKMMRMMGNKKEAGMSWIEVENQV 564
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 181/408 (44%), Gaps = 71/408 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-SLEDARMVFDE 140
T + ++ +C +++ L G VH ++ + + N ++NMY C ++E A ++F +
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRD 172
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ +N V+WT +I G + G +++Y QML + +RA + + V G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTG 232
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+HA V+K S+L N+++ Y + + +A F + KD+ +W ++I
Sbjct: 233 KQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLI------ 286
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+E+E S+++EA+ +F + +P+ T SL+ AC
Sbjct: 287 -------SELER----------------SDSSEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
+ +L G Q+H I ++GF NV + NA++ A
Sbjct: 324 ANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSW 383
Query: 357 -------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E LF M++S +PD I F V+ AC +E G + + +M+
Sbjct: 384 TSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-YFNVME 442
Query: 404 T--GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G+ D + N ++D+ + G +G A EL M PD +W +++
Sbjct: 443 SEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 149/317 (47%), Gaps = 33/317 (10%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
N + P + A +S+ S+ G+++H ++ Q + + N IL+ Y +CG L +A
Sbjct: 208 NADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEA 267
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+ F EM +++++W +I+ ++ A + ++ + G +P+ +TF S++ AC+ +
Sbjct: 268 KRYFHEMEDKDLITWNTLISELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACANI 326
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSM 253
+ G+QLH + + ++ NALI MY K I D+ VF I R+++ SW SM
Sbjct: 327 AALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSM 386
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ G+ + EA+ LF +M + PD +
Sbjct: 387 MIGYGSHGYGA----------------------------EAVELFDKMVSSGIRPDRIVF 418
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI--LQHQAGELFRLFSLMLASQ 370
++L AC + +G++ + + + G + + N + L +AG++ + L+
Sbjct: 419 MAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 371 TKPDHITFNDVMGACAA 387
KPD T+ ++GAC A
Sbjct: 479 FKPDESTWGAILGACKA 495
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 293/534 (54%), Gaps = 20/534 (3%)
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCS 157
R+ H + D N + + G++ AR +FDEMP R+ VSW ++I G
Sbjct: 30 FNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYW 89
Query: 158 QNGQENAAIELYVQMLQSGLMPDQ--FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+NG + + L+ GLMP + ++ S+I C + Q ++ +
Sbjct: 90 KNGCFDESKRLF------GLMPTKNVVSWNSMIAGCIEDERIDEAWQY----FQAMPQRN 139
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMES 272
S NA+I+ ++DR+ +A +F + R+++ S+ +M+DG++K+ + AR +FN M
Sbjct: 140 TASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQ 199
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
N+ SW +I+G +EA +LF +M D+ ++ + +++ + +
Sbjct: 200 KNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIV----AMTAMITGYCKEGKTDKAKIL 255
Query: 333 HSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
I + S + Q+ +GE +L S ML +PDH T V+ AC+++ASL
Sbjct: 256 FDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASL 315
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+ G + H ++K+G + + N L+ MY KCGS+ + F ++ PDVVSW+++I +
Sbjct: 316 QEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAF 375
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A+ G + AL F MRS+ V P+ +T + +L+AC H G V E L + M Y I+P
Sbjct: 376 ARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPR 435
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E +C+VD+L+R G+V +A I +M F+ D +W +LLA+C H NV +G+ AA+ I+
Sbjct: 436 PEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIV 495
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++P NS A V+L NIYA++G W EV R+ G M+E+GV+K P SW+EI K+H
Sbjct: 496 ELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVH 549
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST +++ACSSL SLQ GRK H +L S + + N ++ MY KCGS+ D+ + F +
Sbjct: 300 STLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQ 359
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ +VVSW AMIA +++G + A+ + +M + + PD TF S++ AC
Sbjct: 360 IDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSAC 410
>gi|302801528|ref|XP_002982520.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
gi|300149619|gb|EFJ16273.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
Length = 694
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 291/559 (52%), Gaps = 48/559 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++AC RSL GR +H +L + D VL ++ MYG+CG LE AR +F M
Sbjct: 114 TFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRM 173
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLG 200
P+RNVVSW AM+A C+ N AIEL+ +M+ ++ P + +F +++ A + + G
Sbjct: 174 PERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEG 233
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R++H + + + S + NAL+ MY + + DA VFS++ R+D+ SW +MI +++
Sbjct: 234 RRIHEMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQS 293
Query: 261 DFARTVFN---------EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
A V N M + ++ SWNT+I G + A+S+F M + + +
Sbjct: 294 GLACEVVNLFHRMRAERSMAARDVISWNTMITGYVQAGDPFSALSIFKRMLLEGIRGNQV 353
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKG--FYSNVPVCNAI------------------ 351
T SLL C S L QG IH +I + S+ V AI
Sbjct: 354 TFMSLLSVCDSRALLRQGETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHLFE 413
Query: 352 ------------------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
L +A + F L M PD +TF ++ AC A ++
Sbjct: 414 DTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRQ 473
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G +H I+ +GL D V N L++ Y KCG+L +A LF ++ DVVSW+ +I G+A
Sbjct: 474 GKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAH 533
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G EALK M+ GVRP+ +T + +L+A SH G + +G + M ++ + E
Sbjct: 534 NGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHELERGVE 593
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
C++DLL RAGR+ EAE F++ M +D V W +LL++C+ HG+ + KR A +I+++
Sbjct: 594 HYGCMIDLLGRAGRIGEAEYFVSAMRDEDKEVSWMTLLSACEVHGDEERAKRVAGSIVEM 653
Query: 574 DPTNSAALVLLCNIYASSG 592
+P +S+A V L N+YA+ G
Sbjct: 654 NPQHSSAYVALSNLYATCG 672
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 253/577 (43%), Gaps = 116/577 (20%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDE 140
T+ L+ AC S L+ G+++H + + + + D + N ++ MY KC + A VF E
Sbjct: 12 TFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSE 71
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M +R+++SW IA +++G + L M G+ PD+ TF S + AC G + G
Sbjct: 72 MRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNG 131
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R +HA V++ ++ AL+ MY + + A +F + +++ SW +M
Sbjct: 132 RLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAM------- 184
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCS-NAN--EAMSLFSEMGDRELI-PDGLTVRSL 316
VASC+ NA+ EA+ LF M ++ P ++ ++
Sbjct: 185 ------------------------VASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITV 220
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQT 371
L A T+ +L +G +IH I ++ S + V NA++ G+ R+FS M
Sbjct: 221 LNAVTTREALAEGRRIHEMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAM----E 276
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+ D +++N ++ A A ++GLA +V ++++ + + S
Sbjct: 277 RRDLVSWNAMISAYA----------------QSGLACEV------VNLFHRMRAERS--- 311
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
M DV+SW+++I GY Q G AL +F+RM G+R N VT + +L+ C L
Sbjct: 312 ----MAARDVISWNTMITGYVQAGDPFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAL 367
Query: 492 VEEGLQLYR-----------------IMQNEYG-----------IIPTRERR----SCVV 519
+ +G ++R + N YG T R + ++
Sbjct: 368 LRQGETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMI 427
Query: 520 DLLARAGRVHEAEDFINQMAFD---DDIVVWKSLLASCKTHGNVDVGK----RAAENILK 572
A GR +A D +M + D V + +LL +C G V GK R ++ L+
Sbjct: 428 SAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRQGKMIHARIIDSGLE 487
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
D + ALV N Y+ G + L G++ R V
Sbjct: 488 KDTVVANALV---NFYSKCGNLDTATSLFGALDYRDV 521
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 40/296 (13%)
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK-KGFYSNVPVCNAIL------- 352
M L P+ +T +LL AC SP L G QIH+ + + S+VPV NA++
Sbjct: 1 MAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCE 60
Query: 353 --------------------------QHQAGELFRLFSLMLASQTK---PDHITFNDVMG 383
++G+ +L+ + Q + PD +TF +
Sbjct: 61 RADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALN 120
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
AC SL G +H +++ G+ DV + L+ MY +CG L SARE+F+ M + +VVS
Sbjct: 121 ACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVS 180
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W++++ EA++LF+RM + V P V+ + VL A + + EG +++ ++
Sbjct: 181 WNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIHEMI 240
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
Q E ++ E + +V + R G V +AE + M D+V W +++++ G
Sbjct: 241 Q-ERQLLSQIEVANALVTMYGRCGGVGDAERVFSAME-RRDLVSWNAMISAYAQSG 294
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 328/654 (50%), Gaps = 79/654 (12%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNT 74
A L + G V D+ + FD + + D + S Q + ++ + F ++++
Sbjct: 485 ANSLITMFGNLGRVHDAE-KLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH- 542
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
R +T L+S C+S G +H L S + N ++NMY G L DA
Sbjct: 543 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 602
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+F M +R+++SW MI+ QN A++ Q+ + P+ TF S + ACS
Sbjct: 603 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSP 662
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+ +HA V++ +L+ N+LI MY K + + DA VF S+ DI S
Sbjct: 663 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS----- 717
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+N +I G A + +AM +FS M + P+ +T+
Sbjct: 718 -----------------------YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMI 754
Query: 315 SLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQHQAG---------------- 357
++ + S L+ G +H+YII+ GF S+ V N+++ A
Sbjct: 755 NIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITN 814
Query: 358 --------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
E +LF M + K D + + + +CA++ASLE G QL
Sbjct: 815 KNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQL 874
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS---WSSLIVGYAQF 454
H MK+GL D +V+N MDMY KCG + E+ + D + W++LI GYA++
Sbjct: 875 HGLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQQCWNTLISGYAKY 931
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G +EA + F++M ++G +P++VT V +L+ACSH GLV++G+ Y M + +G+ P +
Sbjct: 932 GYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 991
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
C+VDLL R GR EAE FI +M + ++W+SLL+S +TH N+++G++ A+ +L++D
Sbjct: 992 CVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELD 1051
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
P + +A VLL N+YA++ +W +V +L MK + K P SW++++ ++ G
Sbjct: 1052 PFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFG 1105
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/584 (26%), Positives = 268/584 (45%), Gaps = 99/584 (16%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L +L EAL A+ ++ + + +A ++S C SL + G +V ++ S
Sbjct: 418 LMVALSSNGYLEEALRAYRQMRRD-GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVS 476
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
Q + N ++ M+G G + DA +FD M + + +SW AMI+ S G + ++
Sbjct: 477 GLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVF 536
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M GL PD T S++ C+ G +H+ ++S S + NAL+ MY+
Sbjct: 537 SDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAA 596
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
++ DA +F +++R+D+ SW +MI + V +C
Sbjct: 597 GKLSDAEFLFWNMSRRDLISWNTMISSY---------------------------VQNC- 628
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
N+ +A+ ++ P+ LT S L AC+SP +L G +H+ +++ N+ V N
Sbjct: 629 NSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGN 688
Query: 350 AILQ--------HQAGELF----------------------------RLFSLMLASQTKP 373
+++ A ++F ++FS M ++ KP
Sbjct: 689 SLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKP 748
Query: 374 DHITFNDVMGACAAMASLE-MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
++IT ++ G+ A+ L G LH YI++TG D +V N L+ MY KCG+L S+ +
Sbjct: 749 NYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNI 808
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
FN + + ++VSW+++I Q G GEEALKLF M+ +G + + V L L++C+ + +
Sbjct: 809 FNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASL 868
Query: 493 EEGLQLYRI---------------MQNEYG----------IIPTRERR-----SCVVDLL 522
EEG+QL+ + + YG ++P + R + ++
Sbjct: 869 EEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGY 928
Query: 523 ARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVG 563
A+ G EAE+ QM D V + +LL++C G VD G
Sbjct: 929 AKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 972
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 235/532 (44%), Gaps = 81/532 (15%)
Query: 84 ADLISACSSL---RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
A L++AC + G +H + + + +L++YG G + DA+ +F E
Sbjct: 347 ASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWE 406
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RNVVSWTA++ S NG A+ Y QM + G+ + F +++ C L G
Sbjct: 407 MPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPG 466
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+ + VI S + + N+LI M+ R+ DA +F + D SW +MI +S
Sbjct: 467 LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQ 526
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
F +FS+M L PD T+ SL+ C
Sbjct: 527 GICSKCF----------------------------LVFSDMRHHGLRPDATTLCSLMSVC 558
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL------------------- 359
S G IHS ++ S+V V NA++ AG+L
Sbjct: 559 ASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWN 618
Query: 360 ---------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ + + P+H+TF+ +GAC++ +L G +H +++
Sbjct: 619 TMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQL 678
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L ++ V N L+ MY KC S+ A ++F M D+VS++ LI GYA G +A+++F
Sbjct: 679 SLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVF 738
Query: 465 RRMRSSGVRPNHVTLV---GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
MRS+G++PN++T++ G + + + L Y I G + + ++ +
Sbjct: 739 SWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYII---RTGFLSDEYVANSLITM 795
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
A+ G + + + N + + +IV W +++A+ NV +G E LK+
Sbjct: 796 YAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA-----NVQLGH--GEEALKL 839
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC----- 191
+FDEM R +W ++GC + G++ A E+ M + G+ F S++ AC
Sbjct: 76 LFDEMADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGR 135
Query: 192 -SGLCCVGLGRQLHA 205
G+ C G +HA
Sbjct: 136 DEGIAC---GAAIHA 147
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 193/615 (31%), Positives = 305/615 (49%), Gaps = 103/615 (16%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR------- 135
+ L+ C + R L G+ +H + S P NH + +Y KCG L AR
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 136 ------------------------MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+FD++P+ ++VS+ +I+ + G+ A+ L+
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCC--VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M + GL D FT ++I AC C VGL QLH+ + S S++ NAL+ Y K
Sbjct: 131 MREMGLDMDXFTLSAVITAC----CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ DA VF + G + D SWN++I
Sbjct: 187 GDLDDAKRVFYGM--------GGIRDE-------------------VSWNSMIVAYGQHQ 219
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-- 347
++A+ LF EM R L D T+ S+L A T L G+Q H +IK GF+ N V
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGS 279
Query: 348 ---------------CNAILQHQAGELFRLFSLMLASQT--------------------- 371
C + + L++ M++ +
Sbjct: 280 GLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYVKCGSLGSAR 430
+P+ +F V+ AC+ ++S G Q+H +K+ + + + V N L+ MY KCG+L AR
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDAR 399
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
LF+ M + + VS +S+I GYAQ G E+L LF+ M + P +T + VL+AC+H G
Sbjct: 400 RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG 459
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
VEEG + +M+ ++ I P E SC++DLL RAG++ EAE+ I +M F+ + W SL
Sbjct: 460 RVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASL 519
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L +C+THGN+++ +AA +L+++P+N+A V+L N+YAS+G+WEEVA + M++RGV+
Sbjct: 520 LGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVK 579
Query: 611 KVPGQSWIEIQTKIH 625
K PG SWIE++ +IH
Sbjct: 580 KKPGCSWIEVKKRIH 594
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 45/371 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC-GSLEDARMVFDE 140
T A +++A + L L G + H ++ + ++ + + ++++Y KC G + D R VF+E
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 141 MPQRNVVSWTAMIAGCSQNGQ-ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ + ++V W M++G SQN + A+E + QM G P+ +F +I ACS L
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 200 GRQLHAHVIKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+Q+H+ +KS+ S+ IS NALIAMY+K + DA +F +A + S SMI G++
Sbjct: 362 GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYA 421
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ EMES +L W M +R++ P +T S+L
Sbjct: 422 QHGI------EMESLHLFQW----------------------MLERQIAPTSITFISVLS 453
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKP 373
AC + +G + + +K ++ P C L +AG+L +L+ P
Sbjct: 454 ACAHTGRVEEGWNYFNMMKEK--FNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNP 511
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMK---TGLALDVFVMNGLMDMYVKCGSLGSAR 430
I + ++GAC ++E+ + +++ + A V + N MY G
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN----MYASAGRWEEVA 567
Query: 431 ELFNFMEDPDV 441
+ FM D V
Sbjct: 568 TVRKFMRDRGV 578
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
+ +AL F +Q +R ++ +ISACS+L S G+++H L S + +
Sbjct: 321 EEFLEDALECFRQMQG-IGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRI 379
Query: 117 -LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
+ N ++ MY KCG+L+DAR +FD M + N VS +MIAG +Q+G E ++ L+ ML+
Sbjct: 380 SVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLER 439
Query: 176 GLMPDQFTFGSIIRACS 192
+ P TF S++ AC+
Sbjct: 440 QIAPTSITFISVLSACA 456
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/591 (31%), Positives = 301/591 (50%), Gaps = 105/591 (17%)
Query: 80 PSTY--ADLISACSSLRSLQLGRKVHDHILS---SKCQPDAVLHNHILNMYGKCGSLEDA 134
PS + +++S+C++ + +GRKVH ++ S C P A N +L MYGKCG E A
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVA---NSVLYMYGKCGDAETA 217
Query: 135 RMVFDEMP-------------------------------QRNVVSWTAMIAGCSQNGQEN 163
R VF+ M +R++VSW A+IAG +QNG ++
Sbjct: 218 RAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDD 277
Query: 164 AAIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ--N 220
A++ + +ML + M PD+FT S++ AC+ L + +G+Q+H++++++ G SQ N
Sbjct: 278 MALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRT--GMPYSSQIMN 335
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
ALI+ Y K + A + D+ N+ S+
Sbjct: 336 ALISTYAKSGSVETARRIMDKAVVADL--------------------------NVISFTA 369
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
++ G + +A +F M +R++I + M + G
Sbjct: 370 LLEGYVKLGDTKQAREVFDVMNNRDVIA------------------WTAMIV-------G 404
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ N Q E LF M+ S +P+ T V+ ACA++A L G Q+HC
Sbjct: 405 YEQN---------GQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCR 455
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEE 459
+++ V V N ++ +Y + GS+ AR +F+ + + V+W+S+IV AQ G GE+
Sbjct: 456 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQ 515
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
A+ LF M GV+P+ VT +GV +AC+H G +++G + Y M NE+GI+P +C+V
Sbjct: 516 AIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMV 575
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DLLARAG + EA +FI +M D VVW SLLA+C+ N D+ + AAE +L IDP NS
Sbjct: 576 DLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSG 635
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
A L N+Y++ G+W + AR+ K++ V+K G SW +Q+K+H G D
Sbjct: 636 AYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGAD 686
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 243/470 (51%), Gaps = 51/470 (10%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
R++ D I ++ +A N +L+MY K G L DAR+VF +MP+R+ VSWT M+ G ++
Sbjct: 83 ARRLFDDIPYAR--RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNR 140
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G+ A++ ++ M+ GL P QF +++ +C+ G+GR++H+ VIK S +
Sbjct: 141 AGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPV 200
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNL 275
N+++ MY K A VF + + +SW +M+ ++ ++D A ++F ME ++
Sbjct: 201 ANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI 260
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
SWN IIAG + A+ FS M + PD TV S+L AC + L G Q+HS
Sbjct: 261 VSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHS 320
Query: 335 YIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
YI++ G +P + I+ N ++ A S+E
Sbjct: 321 YILRTG----MPYSSQIM--------------------------NALISTYAKSGSVETA 350
Query: 395 TQLHCYIMKTGLALDVFVMN--GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+ IM + D+ V++ L++ YVK G ARE+F+ M + DV++W+++IVGY
Sbjct: 351 RR----IMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYE 406
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGI 508
Q G +EA++LFR M SG PN TL VL+AC+ + + G Q++ R +Q +
Sbjct: 407 QNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVS 466
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + ++ + AR+G V A +Q+ + + V W S++ + HG
Sbjct: 467 VS-----NAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG 511
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 221/527 (41%), Gaps = 103/527 (19%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM----- 136
T ++SAC++LR L++G+++H +IL + + + N +++ Y K GS+E AR
Sbjct: 298 TVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKA 357
Query: 137 ----------------------------VFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
VFD M R+V++WTAMI G QNGQ + A+EL
Sbjct: 358 VVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMEL 417
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ M++SG P+ T +++ AC+ L +G G+Q+H I+S + NA+I +Y +
Sbjct: 418 FRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYAR 477
Query: 229 FDRILDAWNVFSSIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
+ A VF I RK+ +W SM I +A
Sbjct: 478 SGSVPLARRVFDQICWRKETVTWTSM----------------------------IVALAQ 509
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP- 346
+A+ LF EM + PD +T + ACT + +G + + ++ + + VP
Sbjct: 510 HGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNE--HGIVPE 567
Query: 347 ----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC-----AAMASLEMGTQL 397
C L +AG L + PD + + ++ AC A +A L L
Sbjct: 568 MSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLL 627
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV-----VSWSSLIVGYA 452
+G + L ++Y CG A ++ +D V SW+ +
Sbjct: 628 SIDPDNSG------AYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVH 681
Query: 453 QFGCGE-----------EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-R 500
FG + +A +++ ++ +G P+ L VL L EE L +
Sbjct: 682 VFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPD---LNSVLHDVDD-ELKEELLSRHSE 737
Query: 501 IMQNEYGIIPTRERRSC-VVDLLARAGRVHEAEDFINQMAFDDDIVV 546
+ +G+I T E+ + ++ L H A FI+++ D +I+V
Sbjct: 738 KLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVV-DREIIV 783
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 193/422 (45%), Gaps = 53/422 (12%)
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDR----ILDAWNVFSSI--ARKDITSWGSM 253
GR +HAH +K+ N L++ Y + +A +F I AR++ +W S+
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 254 IDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+ ++K L AR VF +M + SW ++ G+ +A+ F +M L P
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
+ ++L +C + + G ++HS++IK G S VPV N++L + G+
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVL-YMYGKC----------- 211
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
D A A +++ ++ N ++ +Y G + A
Sbjct: 212 --------GDAETARAVFERMKVRSESS--------------WNAMVSLYTHQGRMDLAL 249
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHV 489
+F ME+ +VSW+++I GY Q G + ALK F RM +S + P+ T+ VL+AC+++
Sbjct: 250 SMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANL 309
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD-DIVVWK 548
+++ G Q++ + G+ + + + ++ A++G V A +++ D +++ +
Sbjct: 310 RMLKMGKQMHSYILRT-GMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFT 368
Query: 549 SLLASCKTHGNVDVG--KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
+LL G V +G K+A E ++ + A + Y +G+ +E L SM
Sbjct: 369 ALL-----EGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIR 423
Query: 607 RG 608
G
Sbjct: 424 SG 425
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 291/546 (53%), Gaps = 69/546 (12%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T +++A + + +Q R + D IL+ P+ V N I+ Y + G L++A+ +F +
Sbjct: 459 ATKTAMMTAYAQVGRIQKARLIFDEILN----PNVVAWNAIIAGYTQNGMLKEAKDLFQK 514
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP +N SW AMIAG QN + A+EL +++ +SG +P +F S + AC+ + V +G
Sbjct: 515 MPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R +H+ IK+ + N LI+MY K + D +VF +I KD S
Sbjct: 575 RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS----------- 623
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
WN++I+G++ ++A +F +M R+++
Sbjct: 624 -----------------WNSLISGLSENYMLDDARVVFEKMPKRDVV------------- 653
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL-FRLFSLMLASQTKPDHITFN 379
S + +A +Q GE+ LF MLA KP+ +T
Sbjct: 654 ----------------------SWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVT 691
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
++ AC + ++++G Q H I K G +FV N L+ MY KCG +F M +
Sbjct: 692 SLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEH 750
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D+++W++++VG AQ G G+EA+K+F +M G+ P+ ++ +GVL ACSH GLV+EG +
Sbjct: 751 DLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHF 810
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M +YGI+P +C+VDLL RAG + EAE I M D V+W++LL +C+ H N
Sbjct: 811 NSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRN 870
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
V++G+R AE + ++ SA VLL N++AS G W++VA + MK++G+ K PG SWI+
Sbjct: 871 VELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQ 930
Query: 620 IQTKIH 625
++ K+H
Sbjct: 931 VKNKLH 936
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/598 (23%), Positives = 269/598 (44%), Gaps = 60/598 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D+A + D+F+ + W L + K+ EA F+ + ++ +I
Sbjct: 218 VDEARLLFDAFVGKNIRTWTI-LLTGYAKEGRIEEAREVFESMTERNVV-----SWNAMI 271
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S L+ RK+ D + + + N ++ Y C + +AR +FD+MP+RN V
Sbjct: 272 SGYVQNGDLKNARKLFDEM----PEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSV 327
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW MI+G A +++V+M ++ PDQ F ++ A +GL + L L
Sbjct: 328 SWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIA 387
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFAR 264
IK+ + ++ +A++ YT+ + A + F ++ ++ SW +MI F+ +LD A
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
++ + +A+ ++ A +A +F E+ L P+ + +++ T
Sbjct: 448 QLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEI----LNPNVVAWNAIIAGYTQNG 503
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-ELFRLFSLMLASQTKPDHITFNDVMG 383
L + + + K S + +Q++ E L + S + P +F +
Sbjct: 504 MLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALS 563
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS------------------ 425
ACA + +E+G +H +KTG + +VMNGL+ MY KCG+
Sbjct: 564 ACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS 623
Query: 426 -------------LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
L AR +F M DVVSW+++I Y Q G GE AL LF M + G+
Sbjct: 624 WNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGI 683
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+PN +T+ +L+AC ++G ++ G Q + ++ + G + ++ + + G +E
Sbjct: 684 KPNQLTVTSLLSACGNLGAIKLGEQFHALI-FKLGFDTFLFVGNSLITMYFKCG--YEDG 740
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE-----NILKIDPTNSAALVLLC 585
+ + + D++ W ++L C +G +GK A + + I P + L +LC
Sbjct: 741 FCVFEEMPEHDLITWNAVLVGCAQNG---LGKEAIKIFEQMEVEGILPDQMSFLGVLC 795
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 191/430 (44%), Gaps = 86/430 (20%)
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
G+ G +E+AR VF+EM QR+VVSW +MI G SQNG+ + A L+ D F
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF----------DAFV-- 229
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
G ++ + L+ Y K RI +A VF S+ +
Sbjct: 230 ---------------------------GKNIRTWTILLTGYAKEGRIEEAREVFESMTER 262
Query: 246 DITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
++ SW +MI G+ + L AR +F+EM N+ASWN+++ G C +EA LF +M
Sbjct: 263 NVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMP 322
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL 362
+R S+ + I Y+ ++ E + +
Sbjct: 323 ERN-------------------SVSWMVMISGYVHISDYW---------------EAWDV 348
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M + +PD F V+ A + LE+ L +KTG DV V + +++ Y +
Sbjct: 349 FVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTR 408
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
GSL A F M + + SW+++I +AQ G ++A++L+ R+ V T +
Sbjct: 409 NGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAM 464
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
+TA + VG +++ ++ + N P + ++ + G + EA+D +M +
Sbjct: 465 MTAYAQVGRIQKARLIFDEILN-----PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKN 519
Query: 543 DIVVWKSLLA 552
W +++A
Sbjct: 520 S-ASWAAMIA 528
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 145/650 (22%), Positives = 273/650 (42%), Gaps = 110/650 (16%)
Query: 33 EVVDSFLRRFDDIWDF---DLFSSLCKQNLYN-------EALVAFDFLQNNTNFRIRPST 82
E +++ RR+ ++ D L Q+ N + L F F+ + + T
Sbjct: 107 EKLNNTRRRYSRVYSLYSHDSLKHLTSQSKLNTRHARWMDYLQQFKFVIRHKSGAKNKET 166
Query: 83 YADLISACSSLRSLQLGR--KVHD--HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ C++ R +LGR +V + + + Q D V N ++N Y + G +++AR++F
Sbjct: 167 PQTHLFQCNT-RIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF 225
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D +N+ +WT ++ G ++ G+ A E++ M +
Sbjct: 226 DAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTE------------------------ 261
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF- 257
+++S NA+I+ Y + + +A +F + K++ SW S++ G+
Sbjct: 262 ---------------RNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYC 306
Query: 258 --SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
++ AR +F++M N SW +I+G S+ EA +F +M PD
Sbjct: 307 HCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVV 366
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLAS---QTK 372
+L A T L + IK G+ +V V +AIL R SL LA +T
Sbjct: 367 VLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYT----RNGSLDLAMHFFETM 422
Query: 373 PD--HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
P+ ++ ++ A A L+ QL+ + + +A +M Y + G + AR
Sbjct: 423 PERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKAR 478
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM----------------------- 467
+F+ + +P+VV+W+++I GY Q G +EA LF++M
Sbjct: 479 LIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESRE 538
Query: 468 --------RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
SG P+ + L+AC+++G VE G ++ + + G + ++
Sbjct: 539 ALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHS-LAIKTGCQFNSYVMNGLI 597
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+ A+ G V + + D V W SL++ + +D + E + K D +
Sbjct: 598 SMYAKCGNVEDGSHVFRTIRV-KDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWT 656
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGN 629
A++ + Y +G E L M RG++ P Q + + + + A GN
Sbjct: 657 AII---SAYVQAGHGEVALDLFLDMLARGIK--PNQ--LTVTSLLSACGN 699
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 177/583 (30%), Positives = 306/583 (52%), Gaps = 44/583 (7%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
+ L+S+C+ ++SL GR++H HI+S + +L ++ Y L DA ++ +
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 163
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ W +I+ +NG A+ Y QM++ G+ PD FT+ S+++AC +G G+++
Sbjct: 164 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 223
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF- 262
H + S LI NALI+MY K ++ A ++F I +D SW SMI ++ +
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 283
Query: 263 --ARTVFNEMESP----NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
A +F M + N+ WNTI G N A+ L S+M D + +
Sbjct: 284 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIG 343
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQ- 370
L AC+ G +IHS+ I+ F V NA++ + + LF LM A
Sbjct: 344 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSL 403
Query: 371 ------------------------------TKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+P+++T V+ CA +A+L+ G + HCY
Sbjct: 404 ITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCY 463
Query: 401 IMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ + D + + N L+DMY + G + AR +F+ + + D ++++S+I GY G G+
Sbjct: 464 MTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQA 523
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
ALKLF M + ++P+H+T++ VL+ACSH GLV +G L+ M++ YG+ P E +C+
Sbjct: 524 ALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMT 583
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DL RAG +++A++ I M + +W +L+ +C+ H N ++G+ AAE +L++ P N
Sbjct: 584 DLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPG 643
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
VL+ N+YA++G W ++A++ M++ GVRK PG +W+++ T
Sbjct: 644 YYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGT 686
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 197/480 (41%), Gaps = 110/480 (22%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVH 103
W+ L SS + +AL A+ + IRP TY ++ AC L G++VH
Sbjct: 169 WNL-LISSYVRNGFCQKALSAYKQMVKKG---IRPDNFTYPSVLKACGEELDLGFGKEVH 224
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA--------- 154
+ I +S+ + ++HN +++MYGKCG + AR +FD++P+R+ VSW +MI+
Sbjct: 225 ESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWN 284
Query: 155 --------------------------GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G + G A+EL QM + G D +
Sbjct: 285 EAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGL 344
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
ACS + LG+++H+ I+S G +NALI MY++ + A+ +F + K +
Sbjct: 345 GACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLI 404
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+W N+II+G + EA L EM + P
Sbjct: 405 TW----------------------------NSIISGCCHMDRSEEASFLLREMLLFGIEP 436
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI---------------- 351
+ +T+ S+L C +L G + H Y+ ++ F ++ + NA+
Sbjct: 437 NYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRV 496
Query: 352 --------------------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+Q + +LF M Q KPDHIT V+ AC+ +
Sbjct: 497 FDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLV 556
Query: 392 EMGTQLHCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPDVVSWSSLI 448
G QL M++ GL + + D++ + G L A+E+ N P W++LI
Sbjct: 557 TQG-QLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLI 615
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 75/314 (23%)
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKG-------------FYS---------------- 343
+ SLL +CT SL +G Q+H +II G FYS
Sbjct: 103 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 162
Query: 344 -------NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
N+ + + + + + M+ +PD+ T+ V+ AC L G +
Sbjct: 163 ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 222
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H I + + + V N L+ MY KCG +G AR+LF+ + + D VSW+S+I YA G
Sbjct: 223 VHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGM 282
Query: 457 GEEALKLF-----------------------------------RRMRSSGVRPNHVTLVG 481
EA +LF +MR G + V L+
Sbjct: 283 WNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALII 342
Query: 482 VLTACSHVGLVEEGLQLYRI-MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
L ACSH+G + G +++ +++ +G + T ++ ++ + +R + A + Q+
Sbjct: 343 GLGACSHIGDAKLGKEIHSFAIRSCFGEVDT--VKNALITMYSRCKDLKHAY-LLFQLME 399
Query: 541 DDDIVVWKSLLASC 554
++ W S+++ C
Sbjct: 400 AKSLITWNSIISGC 413
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 183/652 (28%), Positives = 331/652 (50%), Gaps = 74/652 (11%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTN 75
C + +E + +D A +V D + D +W+ + ++L + + +AL F +Q+ +
Sbjct: 170 CALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANL-RSEKWEDALELFRRMQS-AS 227
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ T L+ AC LR+L G+++H +++ + + N I++MY + LE AR
Sbjct: 228 AKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELAR 287
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII------- 188
+ FD N SW ++I+ + N N A +L +M SG+ PD T+ S++
Sbjct: 288 VAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQG 347
Query: 189 ----------------------------RACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
+A GL C LG+++H ++++S+ +
Sbjct: 348 SYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCT 407
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEME----SP 273
+L+ Y K D + A VF K+I +W S+I G++ D A + N+M+ P
Sbjct: 408 SLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKP 467
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+L +WN++++G + + EA+++ + + L P+ ++ +++ C Q
Sbjct: 468 DLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCC---------QNE 518
Query: 334 SYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+Y+ + + FS M KP+ T ++ ACA + L++
Sbjct: 519 NYM---------------------DALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKI 557
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++HC+ M+ G D+++ L+DMY K G L A E+F +++ + W+ +++GYA
Sbjct: 558 GEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAI 617
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
+G GEE LF MR +GVRP+ +T +L+ C + GLV +G + + M+ +Y I PT E
Sbjct: 618 YGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIE 677
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
SC+VDLL +AG + EA DFI+ + D +W ++LA+C+ H ++ + + AA N+L++
Sbjct: 678 HYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRL 737
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+P NSA L+ NIY++ +W +V RL SM GV+ SWI+++ IH
Sbjct: 738 EPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQTIH 789
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/566 (24%), Positives = 230/566 (40%), Gaps = 106/566 (18%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ C +L L LG +VH ++ D L ++N+Y K ++ A VFDE P +
Sbjct: 137 VLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQE 196
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
W ++ ++ + A+EL+ +M + T +++AC L + G+Q+H
Sbjct: 197 DFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHG 256
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+VI+ S+ N++++MY++ +R L+ AR
Sbjct: 257 YVIRFGRVSNTSICNSIVSMYSRNNR----------------------------LELARV 288
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
F+ E N ASWN+II+ A N A L EM + PD +T SLL
Sbjct: 289 AFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLL-------- 340
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
S + +G Y NV F + ++ KPD + + A
Sbjct: 341 --------SGHLLQGSYENV--------------LTNFRSLQSAGFKPDSCSITSALQAV 378
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+ +G ++H YIM++ L DV+V L+D Y+K L A +F+ ++ ++ +W+
Sbjct: 379 IGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWN 438
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE----------- 494
SLI GY G + A KL +M+ G++P+ VT +++ S G EE
Sbjct: 439 SLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSL 498
Query: 495 ------------------------GLQLYRIMQNEYGIIPTRER-----RSCVVDLLARA 525
LQ + MQ E + P R+C L +
Sbjct: 499 GLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEE-NVKPNSTTICTLLRACAGSSLLKI 557
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL-KIDPTNSAALVLL 584
G E F + F DDI + +L+ G + V NI K P + ++
Sbjct: 558 GE--EIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMG- 614
Query: 585 CNIYASSGKWEEVARLMGSMKERGVR 610
YA G EEV L M++ GVR
Sbjct: 615 ---YAIYGHGEEVFTLFDEMRKTGVR 637
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 190/451 (42%), Gaps = 73/451 (16%)
Query: 201 RQLHAHVIKSEHGSHLISQN-ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
R+LHA +IK +L++ + +++ Y +F A VF
Sbjct: 48 RELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFF------------------- 88
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCS-NANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ FAR N WN+ I AS +++E +++F E+ D+ + D + +L
Sbjct: 89 VGFAR---------NYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLK 139
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF---------- 360
C + + L+ GM++H+ ++K+GF+ +V + A++ A ++F
Sbjct: 140 ICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFL 199
Query: 361 ------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
LF M ++ K T ++ AC + +L G Q+H Y++
Sbjct: 200 WNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVI 259
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ G + + N ++ MY + L AR F+ ED + SW+S+I YA C A
Sbjct: 260 RFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWD 319
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
L + M SSGV+P+ +T +L+ G E L +R +Q+ G P + + +
Sbjct: 320 LLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSA-GFKPDSCSITSALQAV 378
Query: 523 ARAGRVH---EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
G + E +I + + D+ V SL+ + +D +A N
Sbjct: 379 IGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLD---KAEVVFHHTKNKNIC 435
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
A L + Y G ++ +L+ MKE G++
Sbjct: 436 AWNSLISGYTYKGLFDNAEKLLNQMKEEGIK 466
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 184/611 (30%), Positives = 307/611 (50%), Gaps = 70/611 (11%)
Query: 53 SLCKQNLYNEALVAFDFLQN--NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
SL KQ E +F++N I P +Y L C +L +L G+ H+ L
Sbjct: 66 SLAKQGNLREV---HEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNR-LQRM 121
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
+ + N IL MY C S A FD++ +++ SW+ +I+ ++ G+ + A+ L++
Sbjct: 122 ANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFL 181
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+ML G+ P+ F ++I + + + LG+Q+H+ +I+ +++ + + MY K
Sbjct: 182 RMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVK-- 239
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
W LD A N+M N + ++ G +
Sbjct: 240 -----------------CGW---------LDGAEVATNKMTRKNAVACTGLMVGYTKAAR 273
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
+A+ LF +M + DG +L AC + LY G QIHSY IK G S V V
Sbjct: 274 NRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTP 333
Query: 351 ILQH---------------------------------QAGELFRLFSLMLASQTKP---D 374
++ Q+G+ R + A ++K +
Sbjct: 334 LVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLN 393
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+ ++ AC+A++ L G Q+H +K GL + + ++ MY KCG + A + F
Sbjct: 394 SFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFL 453
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
++ PD V+W+++I +A G EAL+LF+ M+ SGVRPN VT +G+L ACSH GLV+E
Sbjct: 454 TIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKE 513
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G ++ M +EYG+ PT + +C++D+ +RAG + EA + I + F+ D++ WKSLL C
Sbjct: 514 GKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGC 573
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+H N+++G AA+NI ++DP +SA V++ N+YA +GKW+E A+ M ER +RK
Sbjct: 574 WSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVS 633
Query: 615 QSWIEIQTKIH 625
SWI ++ K+H
Sbjct: 634 CSWIIVKGKVH 644
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 195/457 (42%), Gaps = 77/457 (16%)
Query: 40 RRFDDIWDFDL------FSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACS 91
R FD I D DL S+ ++ +EA+ F + + I P S ++ LI + +
Sbjct: 147 RFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRM---LDLGITPNSSIFSTLIMSFT 203
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
L LG+++H ++ + + I NMY KCG L+ A + ++M ++N V+ T
Sbjct: 204 DPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTG 263
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
++ G ++ + A+ L+ +M+ G+ D F F I++AC+ L + G+Q+H++ IK
Sbjct: 264 LMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG 323
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEME 271
S + L+ Y K R A F SI
Sbjct: 324 LESEVSVGTPLVDFYVKCARFEAARQAFESI----------------------------H 355
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
PN SW+ +IAG + A+ +F + + ++ + ++ AC++ L G Q
Sbjct: 356 EPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQ 415
Query: 332 IHSYIIKKGFYSNVP------------------------------------VCNAILQHQ 355
IH+ IKKG + + +C +
Sbjct: 416 IHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGK 475
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFVMN 414
A E RLF M S +P+ +TF ++ AC+ ++ G + L + G+ + N
Sbjct: 476 AFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYN 535
Query: 415 GLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG 450
++D+Y + G L A E+ + +PDV+SW SL+ G
Sbjct: 536 CMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 297/582 (51%), Gaps = 73/582 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y L+ C + +++ H+ QP D+ LHN +L++Y K G L DA+ +FD+M
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84
Query: 142 PQRNVVSWTAM-------------------------------IAGCSQNGQENAAIELYV 170
+R+ SW A+ IAG S N ++EL+
Sbjct: 85 LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M + G P ++T SI+ A + L + G+Q+H +I ++ NAL MY K
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES-------PNLASWNTIIA 283
I A +F + +K++ SW MI G++K + P+ + +TIIA
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
C +EA +FSE +++++ C + + + G+
Sbjct: 265 AYCQCGRVDEARRVFSEFKEKDIV------------CWTAMMV-------------GYAK 299
Query: 344 NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
N +A+L LF+ ML +PD T + V+ +CA +ASL G +H +
Sbjct: 300 NGREEDALL---------LFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
GL ++ V + L+DMY KCG + AR +FN M +VVSW+++IVG AQ G ++AL+L
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALEL 410
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M +P++VT +G+L+AC H +E+G + + + N++G+ PT + +C+V+LL
Sbjct: 411 FENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLG 470
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
R GR+ +A I MA D D ++W +LL+ C T G++ + AA ++ ++DPT + ++
Sbjct: 471 RTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIM 530
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N+YAS G+W++VA + MK + V+K G SWIEI ++H
Sbjct: 531 LSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVH 572
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 175/425 (41%), Gaps = 102/425 (24%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
E+L F +Q F T +++A + L L+ G+++H I+ + + N +
Sbjct: 138 ESLELFKRMQRE-GFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNAL 196
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
+MY KCG +E AR +FD + ++N+VSW MI+G ++NGQ I L QM SG MPDQ
Sbjct: 197 TDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQ 256
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T +I IA Y + R+ +A VFS
Sbjct: 257 VTMSTI-----------------------------------IAAYCQCGRVDEARRVFSE 281
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
KDI W +M+ G++K N E +A+ LF+EM
Sbjct: 282 FKEKDIVCWTAMMVGYAK--------NGREE--------------------DALLLFNEM 313
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------- 353
+ PD T+ S++ +C SL+ G +H I G +N+ V +A++
Sbjct: 314 LLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFI 373
Query: 354 HQAGELFRL----------------------------FSLMLASQTKPDHITFNDVMGAC 385
A +F L F ML + KPD++TF ++ AC
Sbjct: 374 DDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSAC 433
Query: 386 AAMASLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPDVVS 443
+E G + I + G+ + ++++ + G + A L N DPD +
Sbjct: 434 LHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLI 493
Query: 444 WSSLI 448
WS+L+
Sbjct: 494 WSTLL 498
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFD--FLQNNTNFRI 78
A+ C +D+A V F + W + K +AL+ F+ L++ I
Sbjct: 265 AYCQCGRVDEARRVFSEFKEKDIVCWT-AMMVGYAKNGREEDALLLFNEMLLEH-----I 318
Query: 79 RPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P +Y + ++S+C+ L SL G+ VH + + + ++ + +++MY KCG ++DAR
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ MP RNVVSW AMI GC+QNG + A+EL+ MLQ PD TF I+ AC
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438
Query: 197 VGLGRQLHAHVIKSEHG 213
+ G++ + I ++HG
Sbjct: 439 IEQGQE-YFDSISNQHG 454
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 303/603 (50%), Gaps = 68/603 (11%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L N + ++ +++ + ACS + GR++H ++ D + +L+MY KCG
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
+ +A VF + + + W AM+A ++N +A++L+ M Q ++PD FT ++I
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
CS L G+ +HA + K S ++AL+ +Y+K DA+ VF S+ KD
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKD--- 438
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE--LI 307
+ +W ++I+G+ EA+ +F +M D + L
Sbjct: 439 -------------------------MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGEL 359
PD + S+ AC +L G+Q+H +IK G NV V +++ L A ++
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 360 FR----------------------------LFSLMLASQTKPDHITFNDVMGACAAMASL 391
F LF+LML+ PD ++ V+ A ++ ASL
Sbjct: 534 FTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G LH Y ++ G+ D + N L+DMYVKCG A +F M+ +++W+ +I GY
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGY 653
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G AL LF M+ +G P+ VT + +++AC+H G VEEG ++ M+ +YGI P
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E + +VDLL RAG + EA FI M + D +W LL++ +TH NV++G +AE +L
Sbjct: 714 MEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL 773
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI--QTKIHASGN 629
+++P + V L N+Y +G E A+L+G MKE+G+ K PG SWIE+ +T + SG
Sbjct: 774 RMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGG 833
Query: 630 DIS 632
S
Sbjct: 834 SSS 836
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/542 (26%), Positives = 249/542 (45%), Gaps = 51/542 (9%)
Query: 53 SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQ 112
+L ++ Y +AL + ++ F T+ L+ ACS+L +L G+ +H ++ +
Sbjct: 33 ALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWR 92
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-------RNVVSWTAMIAGCSQNGQENAA 165
D + ++NMY KCG L+ A VFD Q R+V W +MI G + +
Sbjct: 93 YDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEG 152
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG-----LGRQLHAHVIKSEHGSHLISQN 220
+ + +ML G+ PD F+ ++ S +C G G+Q+H ++++ + +
Sbjct: 153 VGCFRRMLVFGVRPDAFSLSIVV---SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKT 209
Query: 221 ALIAMYTKFDRILDAWNVFSSIARK-DITSWGSMIDGF-------SKLDFARTVFNEMES 272
ALI MY KF +DAW VF I K ++ W MI GF S LD N S
Sbjct: 210 ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN--NS 267
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ--GM 330
L S + + +CS + S F +++ GL + CTS LS+Y GM
Sbjct: 268 VKLVS-TSFTGALGACSQSEN--SGFGRQIHCDVVKMGLHNDPYV--CTSLLSMYSKCGM 322
Query: 331 -----QIHSYIIKKGFYSNVPVCNAILQHQAGELF-----RLFSLMLASQTKPDHITFND 380
+ S ++ K + + NA++ A + LF M PD T ++
Sbjct: 323 VGEAETVFSCVVDK----RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V+ C+ + G +H + K + + + L+ +Y KCG A +F ME+ D
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKD 438
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMR--SSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
+V+W SLI G + G +EALK+F M+ ++P+ + V AC+ + + GLQ+
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ M + G++ S ++DL ++ G A M+ +++V W S++ SC +
Sbjct: 499 HGSMI-KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMI-SCYSRN 555
Query: 559 NV 560
N+
Sbjct: 556 NL 557
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 156/349 (44%), Gaps = 32/349 (9%)
Query: 50 LFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
L S LCK + EAL F D ++ + + + +AC+ L +L+ G +VH ++
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
+ + + + ++++Y KCG E A VF M N+V+W +MI+ S+N +I+L
Sbjct: 505 TGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDL 564
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ ML G+ PD + S++ A S + G+ LH + ++ S +NALI MY K
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVK 624
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
A N+F + K + +W N +I G S
Sbjct: 625 CGFSKYAENIFKKMQHKSLITW----------------------------NLMIYGYGSH 656
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVP- 346
+ A+SLF EM PD +T SL+ AC + +G I ++ + G N+
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 347 VCNAI-LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
N + L +AG L +S + A + D + ++ A ++E+G
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELG 765
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 290/504 (57%), Gaps = 19/504 (3%)
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
M E + N+VSW+A+I G +QNG + A+EL +M +G P+ T S++ AC+ L
Sbjct: 1 MSCSENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQ 60
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ LG+++H +V + S+ N L+ +Y + + A +FS + K++ S+ +MI
Sbjct: 61 NLNLGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIV 120
Query: 256 GF---SKLDFARTVFNEME--SPNLASWNTIIAGVA----SCSNANEAMSLFSEMGDREL 306
G+ ++ A+ +F++ME + SWN++I+G A C + A F + +R+
Sbjct: 121 GYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDT 180
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----QHQAGEL-FR 361
+ + AC + L Q + + GF NV N I+ ++ EL R
Sbjct: 181 ATWNVLISGY--ACCNQLENIQNLI--QKMKGDGFEPNVYTWNGIISGHVENGHNELALR 236
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
LF+ M S +PD T ++ ACA +A++ G Q+H + ++ G LDV + L+DMY
Sbjct: 237 LFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYA 296
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCGS+ A +++N + +P++VS ++++ YA G G+E + LFR M +G RP+HVT +
Sbjct: 297 KCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLS 356
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL++C H G VE G + + +M Y + P+ + +C+VDLL+RAGR+ EA + + ++
Sbjct: 357 VLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRK 415
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D V+W +LL C GNV++G+ AAE++++++P N+ VLL N+YA +G+W ++ R
Sbjct: 416 PDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTR 475
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
+K+RG+ K PG SWIE + IH
Sbjct: 476 QMIKDRGMHKSPGCSWIEDREDIH 499
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 186/443 (41%), Gaps = 77/443 (17%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
QN Y++ + F T A ++ AC+ L++L LG+++H ++ +
Sbjct: 23 QNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPF 82
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
+ N ++++Y +C + A +F +NVVS+ MI G +NG A EL+ QM G
Sbjct: 83 VVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVG 142
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
D ++ S+I S + +L+ L A FD
Sbjct: 143 --KDTISWNSMI---------------------SGYADNLLKCEDLKAAQLAFD------ 173
Query: 237 NVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEME----SPNLASWNTIIAGVASCS 289
+ +D +W +I G++ +L+ + + +M+ PN+ +WN II+G
Sbjct: 174 ----GVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENG 229
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-- 347
+ A+ LF+EM L PD TV +L AC ++ +G Q+H++ I++G+ +V +
Sbjct: 230 HNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGA 289
Query: 348 --------CNAI--------------------------LQHQAGELFRLFSLMLASQTKP 373
C +I + E LF ML + +P
Sbjct: 290 ALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRP 349
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
DH+TF V+ +C ++E G + + + + ++D+ + G L A EL
Sbjct: 350 DHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELV 409
Query: 434 NFM-EDPDVVSWSSLIVGYAQFG 455
+ PD V W +L+ G +G
Sbjct: 410 KKIPRKPDSVMWGALLGGCVIWG 432
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/628 (30%), Positives = 322/628 (51%), Gaps = 108/628 (17%)
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN------------------ 145
D I+ D V+ N +++ Y + G+L AR++FDEMP+RN
Sbjct: 76 DQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVE 135
Query: 146 -------------VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
VVSWTA I+G +NG A++L+ ++L+SG+ P+ TF S++RAC
Sbjct: 136 ESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACG 195
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L GLG + V+K+ +L N+LI + + I A VF + ++D+ SW +
Sbjct: 196 ELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTA 255
Query: 253 MIDGFSK---LDFARTVFNEME-----------------------------------SPN 274
++D + + L AR +F+EM PN
Sbjct: 256 ILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPN 315
Query: 275 LASWNTIIAGVASCSNANEAMSL---FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
++ + ++ +AS + +++ +++G + + G ++ L C C P G
Sbjct: 316 ISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKP---DDGRL 372
Query: 332 IHSYIIKK---------GFYS-------------NVPVCNAIL----------QHQAGEL 359
+ I++K G YS +P N + Q ++
Sbjct: 373 VFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKV 432
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+F+ +L S P+ TF+ V+ ACA++ASL+ G +H I+K G+ D+FV L DM
Sbjct: 433 LEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVT 478
Y KCG +GS++++F M + + +SW+ +I G A+ G E+L LF M R+S V PN +
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
L+ VL ACSH GLV++GL + M+ YGI P + +CVVDLL+R+GR++EAE+FI +
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
F + W +LL+ CK + + + +R A+ + ++ NSA VLL NIYAS+G+W +V+
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ M+E+G++K G SW+E++ ++H+
Sbjct: 673 NIRKLMREKGLKKSGGCSWVEVRNQVHS 700
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 41/321 (12%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ L +A + D R + W + + + EAL F + F+
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWS-AMIARYSQSGYAEEALKLFSKMVQE-GFKPN 315
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
S +A +SA +SLR+L G +H H+ D + + ++++Y KCG +D R+VFD
Sbjct: 316 ISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFD 375
Query: 140 EMPQRNVVSWTAMIAGCSQNGQ---------------------------EN----AAIEL 168
+ ++NVV W +M+ G S NG+ EN +E+
Sbjct: 376 LILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEV 435
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ +L SG P++ TF S++ AC+ + + G +H +IK + AL MY K
Sbjct: 436 FNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAK 495
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA---RTVFNEME-----SPNLASWNT 280
I + VF + K+ SW MI G ++ FA +F EME +PN +
Sbjct: 496 CGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLS 555
Query: 281 IIAGVASCSNANEAMSLFSEM 301
++ + C ++ + F+ M
Sbjct: 556 VLFACSHCGLVDKGLWYFNSM 576
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 172/407 (42%), Gaps = 70/407 (17%)
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSE-------------------------------HGS 214
S+++ S + G LHAH+IK+ GS
Sbjct: 26 SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGS 85
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG---FSKLDFARTVFNEME 271
L+ N +I+ Y ++ ++ A +F + ++ SW ++I G + +++ + F
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
N+ SW I+G EA+ LF + + + P+ +T S++ AC GM
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
I ++K GF + V N++ IT + MG +
Sbjct: 206 ILGLVVKAGFEHYLSVSNSL------------------------ITLSLRMG------EI 235
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
++ ++ + K DV ++D YV+ G L AR +F+ M + + +SWS++I Y
Sbjct: 236 DLARRVFDRMEKR----DVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARY 291
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+Q G EEALKLF +M G +PN L+A + + + G+ ++ + + GI
Sbjct: 292 SQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHV-TKIGIDKD 350
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S ++DL + G+ + + + + ++V W S++ +G
Sbjct: 351 VFIGSSLIDLYCKCGKPDDGR-LVFDLILEKNVVCWNSMVGGYSING 396
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 11/186 (5%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST++ ++ AC+S+ SL G VH I+ Q D + + +MY KCG + ++ VF+
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACS--GLCCV 197
MP++N +SWT MI G +++G ++ L+ +M + S + P++ S++ ACS GL
Sbjct: 509 MPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK 568
Query: 198 GL---GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM 253
GL + IK + G H ++ + ++ R+ +A +I + + +W ++
Sbjct: 569 GLWYFNSMEKVYGIKPK-GKHY---TCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAAL 624
Query: 254 IDGFSK 259
+ G K
Sbjct: 625 LSGCKK 630
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 137/341 (40%), Gaps = 92/341 (26%)
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQT 371
T SLL ++ + QG +H+++IK GF S + +L L L
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIA-----------IKLLILYL---- 67
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
C A ++ I+K D+ V N ++ YV+ G+L AR
Sbjct: 68 ------------NCRKFAEIDQ-------IVKEFDGSDLVVSNCMISAYVQWGNLVQARL 108
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGE-------------------------------EA 460
LF+ M + + VSWS+LI G ++G E EA
Sbjct: 109 LFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEA 168
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVG-----------LVEEGLQLYRIMQNEYGII 509
LKLF R+ SGVRPN VT V+ AC +G +V+ G + Y + N
Sbjct: 169 LKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSN----- 223
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
++ L R G + A ++M D+V W ++L + G++ +R +
Sbjct: 224 -------SLITLSLRMGEIDLARRVFDRME-KRDVVSWTAILDAYVETGDLREARRIFDE 275
Query: 570 ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
+ + + + +A++ Y+ SG EE +L M + G +
Sbjct: 276 MPERNEISWSAMIAR---YSQSGYAEEALKLFSKMVQEGFK 313
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 297/561 (52%), Gaps = 65/561 (11%)
Query: 102 VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQ 161
VH ++ Q DA + +++ Y CG+++ AR VFD + +++VSWT M+A ++N
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYC 185
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
++ L+ QM G P+ FT + +++C+GL +G+ +H +K + L A
Sbjct: 186 HEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIA 245
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTI 281
L+ +YTK I +A + F EM +L W+ +
Sbjct: 246 LLELYTKSGEIAEA----------------------------QQFFEEMPKDDLIPWSLM 277
Query: 282 IAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
I+ A + EA+ LF M ++ P+ T S+L AC S + L G QIHS ++K G
Sbjct: 278 ISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVG 337
Query: 341 FYSNVPVCNAILQHQA--GEL----------------------------------FRLFS 364
SNV V NA++ A GE+ LFS
Sbjct: 338 LDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFS 397
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
ML +P +T++ V+ A A++ +LE G Q+H +KT D V N L+DMY KCG
Sbjct: 398 NMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCG 457
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+ AR F+ M+ D VSW++LI GY+ G G EAL LF M+ S +PN +T VGVL+
Sbjct: 458 RIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLS 517
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
ACS+ GL+++G ++ M +YGI P E +C+V LL R+G+ EA I ++ F +
Sbjct: 518 ACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSV 577
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
+VW++LL +C H N+D+GK A+ +L+++P + A VLL N+YA++ +W+ VA + +M
Sbjct: 578 MVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNM 637
Query: 605 KERGVRKVPGQSWIEIQTKIH 625
K++ V+K PG SW+E Q +H
Sbjct: 638 KKKKVKKEPGLSWVENQGVVH 658
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 178/581 (30%), Positives = 298/581 (51%), Gaps = 69/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ AC+ L SL+ K+H HIL + Q + ++++Y KC AR+VFD+M
Sbjct: 30 TFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQM 89
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P +++VSW ++I+ ++ + + + QM GL TF + +CS + G
Sbjct: 90 PIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS----LPQGL 145
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H ++ K HL N++++MY + ++I A +VF ++ +K I
Sbjct: 146 SIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIV------------- 192
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
SW I+ G S + + ++F++M + + PD + +L+ C
Sbjct: 193 ---------------SWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCK 237
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------- 356
+L M +HS ++K GF P+ N ++ A
Sbjct: 238 LSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTS 297
Query: 357 -----------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E LF+++L + ++P+ +T V+ ACA M SL MG ++ YI+ G
Sbjct: 298 MISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNG 357
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L D+ V L+ M+ KCGS+ A+ LF + + D+ WS++I GYA G G+EAL LF
Sbjct: 358 LGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFH 417
Query: 466 RMRSS-GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M++ G++P+ + VL ACSH GL+E+GL+ +R MQ ++GI P+ + SC+VDLL R
Sbjct: 418 KMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGR 477
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG V A I +M VW L++C TH N+++G+ AA+N+ ++P ++ VL+
Sbjct: 478 AGYVELALRTIQEMPVLVQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLM 537
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+Y S GKW+E A+ + RG+ K PG S IEI +H
Sbjct: 538 TNLYTSMGKWKEAAKARSIINARGLVKEPGWSQIEIDGAVH 578
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 212/477 (44%), Gaps = 86/477 (18%)
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
SG+ +FTF +++AC+ L + +LH+H++ + +H+ Q AL+ +Y+K
Sbjct: 22 SGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHS 81
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
A VF + K + SW S+I + DF + +++
Sbjct: 82 ARLVFDQMPIKSLVSWNSIISAHCR-DF---------------------------HIDQS 113
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ- 353
+ +M L T L +C+ P QG+ IH YI K G ++P+ N+I+
Sbjct: 114 FGILKQMQLLGLELSSATFTGFLASCSLP----QGLSIHGYITKLGLDLHLPLANSIMSM 169
Query: 354 -----------------HQ------------------AGELFRLFSLMLASQTKPDHITF 378
HQ ++F +F+ M PD I F
Sbjct: 170 YIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVF 229
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+++ C +L + +H ++K+G + N L+ MY KC L SAR +F+ + +
Sbjct: 230 VNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHE 289
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
V W+S+I GYAQFG EAL LF + + RPN +TL VL+AC+ +G + G ++
Sbjct: 290 KSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEI 349
Query: 499 YR-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ I+ N G+ ++ ++ + + G + +A+ ++ + D+ VW +++ H
Sbjct: 350 EQYILLN--GLGSDLRVQTSLIHMFCKCGSIKKAQALFERIP-NKDLAVWSAMINGYAVH 406
Query: 558 GNVDVGKRAA--------ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
G +GK A E +K D +++L C + SG E+ + SM++
Sbjct: 407 G---MGKEALNLFHKMQNEVGIKPDAIVYTSVLLAC---SHSGLIEDGLKYFRSMQK 457
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 193/615 (31%), Positives = 305/615 (49%), Gaps = 103/615 (16%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR------- 135
+ L+ C + R L G+ +H + S P NH + +Y KCG L AR
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 136 ------------------------MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+FD++P+ ++VS+ +I+ + G+ A+ L+
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCC--VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M + GL D FT ++I AC C VGL QLH+ + S S++ NAL+ Y K
Sbjct: 131 MREMGLDMDGFTLSAVITAC----CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ DA VF + G + D SWN++I
Sbjct: 187 GDLDDAKRVFYGM--------GGIRDE-------------------VSWNSMIVAYGQHQ 219
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-- 347
++A+ LF EM R L D T+ S+L A T L G+Q H +IK GF+ N V
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGS 279
Query: 348 ---------------CNAILQHQAGELFRLFSLMLASQT--------------------- 371
C + + L++ M++ +
Sbjct: 280 GLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYVKCGSLGSAR 430
+P+ +F V+ AC+ ++S G Q+H +K+ + + + V N L+ MY KCG+L AR
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDAR 399
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
LF+ M + + VS +S+I GYAQ G E+L LF+ M + P +T + VL+AC+H G
Sbjct: 400 RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG 459
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
VEEG + +M+ ++ I P E SC++DLL RAG++ EAE+ I +M F+ + W SL
Sbjct: 460 RVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASL 519
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L +C+THGN+++ +AA +L+++P+N+A V+L N+YAS+G+WEEVA + M++RGV+
Sbjct: 520 LGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVK 579
Query: 611 KVPGQSWIEIQTKIH 625
K PG SWIE++ +IH
Sbjct: 580 KKPGCSWIEVKKRIH 594
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 45/371 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC-GSLEDARMVFDE 140
T A +++A + L L G + H ++ + ++ + + ++++Y KC G + D R VF+E
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 141 MPQRNVVSWTAMIAGCSQNGQ-ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ + ++V W M++G SQN + A+E + QM G P+ +F +I ACS L
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 200 GRQLHAHVIKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+Q+H+ +KS+ S+ IS NALIAMY+K + DA +F +A + S SMI G++
Sbjct: 362 GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYA 421
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ EMES +L W M +R++ P +T S+L
Sbjct: 422 QHGI------EMESLHLFQW----------------------MLERQIAPTSITFISVLS 453
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKP 373
AC + +G + + +K ++ P C L +AG+L +L+ P
Sbjct: 454 ACAHTGRVEEGWNYFNMMKEK--FNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNP 511
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMK---TGLALDVFVMNGLMDMYVKCGSLGSAR 430
I + ++GAC ++E+ + +++ + A V + N MY G
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN----MYASAGRWEEVA 567
Query: 431 ELFNFMEDPDV 441
+ FM D V
Sbjct: 568 TVRKFMRDRGV 578
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
+ +AL F +Q +R ++ +ISACS+L S G+++H L S + +
Sbjct: 321 EEFLEDALECFRQMQG-IGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRI 379
Query: 117 -LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
+ N ++ MY KCG+L+DAR +FD M + N VS +MIAG +Q+G E ++ L+ ML+
Sbjct: 380 SVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLER 439
Query: 176 GLMPDQFTFGSIIRACS 192
+ P TF S++ AC+
Sbjct: 440 QIAPTSITFISVLSACA 456
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 205/653 (31%), Positives = 326/653 (49%), Gaps = 86/653 (13%)
Query: 32 GEVVDSFLRRFDDIW----------DFDLFS------SLCKQNLYNEALVAFDFLQNNTN 75
G + S L RF + W + D+FS K L +EAL D
Sbjct: 126 GNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEAL---DLYHRMMW 182
Query: 76 FRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
+RP T+ ++ +C + ++GR+VH H+L + + N ++ MY KCG +
Sbjct: 183 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMA 242
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
AR VFD M + +SW AMIAG +NG+ NA +EL++ ML + P+ T S+ A
Sbjct: 243 ARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGL 302
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L V +++H +K + N+LI MY S G M
Sbjct: 303 LSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYA---------------------SLGMM 341
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
ARTVF+ M++ + +W +I+G ++A+ +++ M + PD +T+
Sbjct: 342 RQ-------ARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITI 394
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------- 353
S L AC SL G+++H KGF S + V NAIL+
Sbjct: 395 ASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHE 454
Query: 354 ----------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
H+ E F MLA KP+ +TF + ACAA +L G ++
Sbjct: 455 KDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEI 513
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H ++++ G+ + ++ N L+D+YVKCG G A F DVVSW+ +I G+ G G
Sbjct: 514 HAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHG 573
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
+ AL F +M G P+ VT V +L ACS G+V EG +L+ M +Y I+P + +C
Sbjct: 574 DTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYAC 633
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+VDLL+RAG++ EA +FIN+M D VW +LL C+ H +V++G+ AA+ +L ++P +
Sbjct: 634 MVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPND 693
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
+ VLLC++YA + W+++AR+ +M+E+G+ G SW+E++ +HA D
Sbjct: 694 AGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTD 746
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 298/581 (51%), Gaps = 53/581 (9%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+Y +IS L R + D + D N +L Y + L DARM+FD M
Sbjct: 66 SYNAMISGYLRNAKFSLARDLFDKM----PHKDLFSWNLMLTGYARNRRLRDARMLFDSM 121
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+++VVSW AM++G ++G + A +++ +M + + +R+ GR
Sbjct: 122 PEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRS---------GR 172
Query: 202 QLHAH-VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
A + +S+ LIS N L+ Y K + + DA +F I +D+ SW +MI G+++
Sbjct: 173 LEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQD 232
Query: 260 ---------------------------------LDFARTVFNEMESPNLASWNTIIAGVA 286
LD AR VF+EM S+N +IAG A
Sbjct: 233 GDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYA 292
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+ LF EM P+ + ++ L Q + + ++ S
Sbjct: 293 QYKRMDMGRELFEEMP----FPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAA 348
Query: 347 VCNAILQHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ Q+ E + M + TF + ACA +A+LE+G Q+H +++TG
Sbjct: 349 IIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTG 408
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
V N L+ MY KCG + A ++F ++ D+VSW++++ GYA+ G G +AL +F
Sbjct: 409 YEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFE 468
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M ++GV+P+ +T+VGVL+ACSH GL + G + + M +YGI P + +C++DLL RA
Sbjct: 469 SMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRA 528
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G + EA++ I M F+ D W +LL + + HGN+++G++AAE + K++P NS VLL
Sbjct: 529 GCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLS 588
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N+YA+SG+W +V+++ M++ GV+K PG SW+E+Q KIH
Sbjct: 589 NLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHT 629
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 197/482 (40%), Gaps = 90/482 (18%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
P V ++ + + G + A VFD MP RN VS+ AMI+G +N + + A +L+ +M
Sbjct: 31 PHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM 90
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
L S N ++ Y + R+
Sbjct: 91 PHKD---------------------------------------LFSWNLMLTGYARNRRL 111
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCS 289
DA +F S+ KD+ SW +M+ G+ + +D AR VF+ M N SWN ++A
Sbjct: 112 RDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSG 171
Query: 290 NANEAMSLFSEMGDRELIP---------------------DGLTVRSLLCACT------S 322
EA LF D ELI D + VR L+ T
Sbjct: 172 RLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQ 231
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQTKPDHITFNDV 381
L Q ++ + ++ + A +Q E R+F M + +++N +
Sbjct: 232 DGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM----PQKREMSYNVM 287
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ A ++MG +L + ++ N ++ Y + G L AR LF+ M D
Sbjct: 288 IAGYAQYKRMDMGREL----FEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDS 343
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
VSW+++I GYAQ G EEA+ + M+ G N T L+AC+ + +E G Q++
Sbjct: 344 VSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHG- 402
Query: 502 MQNEYGIIPTRERRSC-----VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
++ T + C +V + + G + EA D + Q DIV W ++LA
Sbjct: 403 -----QVVRTGYEKGCLVGNALVGMYCKCGCIDEAYD-VFQGVQHKDIVSWNTMLAGYAR 456
Query: 557 HG 558
HG
Sbjct: 457 HG 458
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L QA + D +R W + + + LY EA+ ++ + + ST+ +
Sbjct: 328 LAQARNLFDMMPQRDSVSWA-AIIAGYAQNGLYEEAMNMLVEMKRDGE-SLNRSTFCCAL 385
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ + +L+LG++VH ++ + + ++ N ++ MY KCG +++A VF + +++V
Sbjct: 386 SACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIV 445
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW M+AG +++G A+ ++ M+ +G+ PD+ T ++ ACS G + + H
Sbjct: 446 SWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTE-YFHS 504
Query: 208 IKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
+ ++G S++ +I + + + +A N+ ++ D +WG+++
Sbjct: 505 MNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALL 554
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 284/539 (52%), Gaps = 72/539 (13%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G+L AR VFDEMP R+VV+WTAM++G + NG + A++L+ +ML +G+ P++FT S++
Sbjct: 17 GALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVL 76
Query: 189 RACSGLCCVG--LGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
AC G G LHA ++ +H +++ NALI Y + V +R
Sbjct: 77 TACRGGAADGGCEPSSLHAVAVRRGVDHMPYVV--NALIEAYASCEE-----GVGVEESR 129
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
K + GS RT ASW +++AG + + LF M
Sbjct: 130 KLFDALGS----------GRTA---------ASWTSMVAGYSRWGQEQTGLQLFQTM--- 167
Query: 305 ELIPDGLTVRSLLC-----ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----- 354
I DG+ + C AC S +L G Q+H ++K F +N+ V N+++
Sbjct: 168 --IQDGIELSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCA 225
Query: 355 ---QAGELF----------------------RLFSLMLASQT--KPDHITFNDVMGACAA 387
A LF L +L L + +P+ T + ACA
Sbjct: 226 NLLDARRLFDEIPERNLVTWNTMIAWYSQCNHLMALQLLREMNLQPNCFTLTSITSACAG 285
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+ASL G Q+H ++ D+ + N L+DMY KCGS+ +A+++FN M+ D +SW+S+
Sbjct: 286 LASLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSM 345
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I GY G E+++LF M +GV P+HV +G++ AC+H GLV+EG +R M +EY
Sbjct: 346 ITGYGMNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYN 405
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
+ P +E CV +LLARAGR+ EA D I++M F D VW +LL +CK H NV++G+ AA
Sbjct: 406 LQPNKEIYGCVTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAA 465
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
I++I+P + VLL NIYA+ KW E A ++ G RK G SWI++ KI++
Sbjct: 466 RKIIEINPDRAKTYVLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYS 524
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 152/322 (47%), Gaps = 35/322 (10%)
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P T + + AC+S+ +L +G+++H L + + N +++MY C +L DAR
Sbjct: 172 IELSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDAR 231
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FDE+P+RN+V+W MIA SQ A++L +M L P+ FT SI AC+GL
Sbjct: 232 RLFDEIPERNLVTWNTMIAWYSQCNHL-MALQLLREM---NLQPNCFTLTSITSACAGLA 287
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+Q+H ++ +G L NAL+ MY+K I +A +F+ + KD SW SMI
Sbjct: 288 SLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMIT 347
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+ + ANE++ LF+ M + PD +
Sbjct: 348 GYGMNGY----------------------------ANESIQLFTSMIHAGVHPDHVVFLG 379
Query: 316 LLCACTSPLSLYQGMQ-IHSYIIKKGFYSNVPV--CNAILQHQAGELFRLFSLMLASQTK 372
L+CAC + +G S + N + C L +AG L F L+
Sbjct: 380 LICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFDLIHRMPFA 439
Query: 373 PDHITFNDVMGACAAMASLEMG 394
PD + ++GAC ++E+G
Sbjct: 440 PDETVWGALLGACKMHKNVELG 461
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 169/363 (46%), Gaps = 56/363 (15%)
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+A+K T+ + L AR VF+EM ++ +W +++G AS + A+ LF M
Sbjct: 1 MAQKHATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRM 60
Query: 302 GDRELIPDGLTVRSLLCACTSPLS--LYQGMQIHSYIIKKGFYSNVPVCNAILQ------ 353
+ P+ T+ S+L AC + + +H+ +++G V NA+++
Sbjct: 61 LAAGVGPNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCE 120
Query: 354 -----HQAGELF-----------------------------RLFSLMLASQTKPDHITFN 379
++ +LF +LF M+ + T +
Sbjct: 121 EGVGVEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCS 180
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+ ACA++A+L +G QLH ++ ++ V N L+DMY C +L AR LF+ + +
Sbjct: 181 IALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPER 240
Query: 440 DVVSWSSLIVGYAQFGCGE-EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
++V+W+++I Y+Q C AL+L R M ++PN TL + +AC+ + + G Q+
Sbjct: 241 NLVTWNTMIAWYSQ--CNHLMALQLLREMN---LQPNCFTLTSITSACAGLASLRFGQQV 295
Query: 499 Y-RIMQNEYGIIPTRERRSC--VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ ++ YG ++ + C +VD+ ++ G + A+ N M + D + W S++
Sbjct: 296 HGAALRRNYG----KDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKL-SWTSMITGYG 350
Query: 556 THG 558
+G
Sbjct: 351 MNG 353
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 86/155 (55%), Gaps = 3/155 (1%)
Query: 40 RRFDDIWDFDLFSSLCKQNLYNEA--LVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQ 97
R FD+I + +L + Y++ L+A L+ N + T + SAC+ L SL+
Sbjct: 232 RLFDEIPERNLVTWNTMIAWYSQCNHLMALQLLRE-MNLQPNCFTLTSITSACAGLASLR 290
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCS 157
G++VH L D + N +++MY KCGS+ +A+ +F+ M ++ +SWT+MI G
Sbjct: 291 FGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYG 350
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
NG N +I+L+ M+ +G+ PD F +I AC+
Sbjct: 351 MNGYANESIQLFTSMIHAGVHPDHVVFLGLICACN 385
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 298/544 (54%), Gaps = 18/544 (3%)
Query: 92 SLRSLQLGRKVHD---HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
++RS + ++VH I+++ Q + + ++ + + AR +FD++P N+
Sbjct: 107 NMRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIAL 166
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +M G +Q+ + L+ QM + P+ FTF ++++C + + G Q+H +I
Sbjct: 167 WNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLI 226
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFART 265
K + LI MY+ + DA+ +F + +++ +W SMI+G+ + L AR
Sbjct: 227 KCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARR 286
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL-----IPDGLTVRSLLCAC 320
+F+ ++ WN +++G + EA LF EM +R++ + G + A
Sbjct: 287 LFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEAL 346
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
I S+ G Y++ N + G R+ S S P+ T
Sbjct: 347 EGLFEEMPERNIFSWNALIGGYAH----NGLFFEVLGSFKRMLS---ESDVPPNDATLVT 399
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V+ ACA + +L++G +H Y +GL +V+V N LMDMY KCG + +A +F M+ D
Sbjct: 400 VLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKD 459
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
++SW++LI G A G +AL LF +M+++G +P+ +T +G+L AC+H+GLVE+G ++
Sbjct: 460 LISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQ 519
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
M ++Y I+P E C+VD+LARAGR+ +A F+ +M + D V+W LL +C+ + NV
Sbjct: 520 SMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNV 579
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
++ + A + +++++P N A V+L NIY +G+WE+VARL +M++ G +K+PG S IE+
Sbjct: 580 ELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEV 639
Query: 621 QTKI 624
+
Sbjct: 640 NDAV 643
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 196/469 (41%), Gaps = 63/469 (13%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKV 102
+W+ +F + Y E V F F Q IRP+ T+ ++ +C + +L G +V
Sbjct: 166 LWN-SMFRGYAQSESYRE--VVFLFFQMK-GMDIRPNCFTFPVVLKSCGKINALIEGEQV 221
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H ++ + + + +++MY G++ DA +F EM +RNVV+WT+MI G +
Sbjct: 222 HCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADL 281
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
+A L+ L P++ ++ N +
Sbjct: 282 VSARRLF------DLAPER---------------------------------DVVLWNIM 302
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWN 279
++ Y + +++A +F + +D+ W +++ G++ ++ +F EM N+ SWN
Sbjct: 303 VSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWN 362
Query: 280 TIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+I G A E + F M + ++ P+ T+ ++L AC +L G +H Y
Sbjct: 363 ALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAES 422
Query: 339 KGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
G NV V NA++ A G + S+ TK D I++N ++G A +
Sbjct: 423 SGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTK-DLISWNTLIGGLAMHSRGADALN 481
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-----PDVVSWSSLIVGY 451
L + G D G++ G + F M D P + + ++
Sbjct: 482 LFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDML 541
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC---SHVGLVEEGLQ 497
A+ G E+A R+M V + V G+L AC +V L E LQ
Sbjct: 542 ARAGRLEQAXAFVRKMP---VEADGVIWAGLLGACRIYKNVELAELALQ 587
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 195/640 (30%), Positives = 329/640 (51%), Gaps = 105/640 (16%)
Query: 30 QAGEVVDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPS-- 81
+AG + DS R FD+I D S L+ A+ AF + ++ I P+
Sbjct: 91 KAGNL-DSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSG---ISPTQF 146
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ +++++C++ ++L +G+KVH ++ + N +LNMY KCG A++VFD
Sbjct: 147 TFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRM 206
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
+M ++VSW ++I G G + A+E +
Sbjct: 207 RLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFS 266
Query: 171 QMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
ML+S L PD+FT GS++ AC+ + LG+Q+HAH+++++ NALI+MY K
Sbjct: 267 FMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKS 326
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ +A + + G+ S N+ ++ +++ G
Sbjct: 327 GAV--------EVAHRIVEITGT------------------PSLNVIAFTSLLDGYFKIG 360
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+ + A ++F + R+++ + M + G+ N + +
Sbjct: 361 DIDPARAIFDSLKHRDVVA------------------WTAMIV-------GYAQNGLISD 395
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
A++ LF LM+ KP++ T V+ +++ASL+ G QLH ++
Sbjct: 396 ALV---------LFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSS 446
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
V V N L+ MY + GS+ AR++FN + D ++W+S+I+ AQ G G EA++LF +M
Sbjct: 447 VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKML 506
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
++P+H+T VGVL+AC+HVGLVE+G + +M+N + I PT +C++DLL RAG +
Sbjct: 507 RINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLL 566
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA +FI M + D+V W SLL+SC+ H VD+ K AAE +L IDP NS A + L N
Sbjct: 567 EEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTL 626
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
++ GKWE+ A++ SMK++ V+K G SW++I+ K+H G
Sbjct: 627 SACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFG 666
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 237/461 (51%), Gaps = 39/461 (8%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N IL+ + K G+L+ AR VFDE+PQ + VSWT MI G + G +A+ +++M+ SG+
Sbjct: 83 NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P QFTF +++ +C+ + +G+++H+ V+K + N+L+ MY K + A V
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202
Query: 239 FSSIARKDITSWGSMID---GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + KD ++W +MI F + D A +F++M P++ SWN+II G A+
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRAL 262
Query: 296 SLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
FS M L PD T+ S+L AC + SL G QIH++I++ ++V + A+
Sbjct: 263 ETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVR----ADVDIAGAV--- 315
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL-ALDVFVM 413
N ++ A ++E+ H + TG +L+V
Sbjct: 316 -----------------------GNALISMYAKSGAVEVA---HRIVEITGTPSLNVIAF 349
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
L+D Y K G + AR +F+ ++ DVV+W+++IVGYAQ G +AL LFR M G +
Sbjct: 350 TSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPK 409
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
PN+ TL VL+ S + ++ G QL+ + + + + ++ + +R+G + +A
Sbjct: 410 PNNYTLAAVLSVISSLASLDHGKQLHAVAI-RLEEVSSVSVGNALITMYSRSGSIKDARK 468
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
N + D + W S++ S HG + E +L+I+
Sbjct: 469 IFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRIN 509
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 143/291 (49%), Gaps = 17/291 (5%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
+D A + DS R W + + L ++ALV F + +P+ Y A
Sbjct: 362 IDPARAIFDSLKHRDVVAWT-AMIVGYAQNGLISDALVLFRLMIREGP---KPNNYTLAA 417
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM-PQR 144
++S SSL SL G+++H + + + N ++ MY + GS++DAR +F+ + R
Sbjct: 418 VLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYR 477
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+ ++WT+MI +Q+G N AIEL+ +ML+ L PD T+ ++ AC+ + V G+ +
Sbjct: 478 DTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKS-Y 536
Query: 205 AHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG---FS 258
+++K+ H S + +I + + + +A+N ++ D+ +WGS++
Sbjct: 537 FNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHK 596
Query: 259 KLDFARTVFNEM---ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
+D A+ ++ + N ++ + +++C +A + M D+ +
Sbjct: 597 YVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAV 647
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 393 MGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCGS-------------------------- 425
+G +H I+K GL L VF+ N L+++YVK GS
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAH 89
Query: 426 -----LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
L SAR +F+ + PD VSW+++IVGY G + A+ F RM SSG+ P T
Sbjct: 90 AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFT 149
Query: 481 GVLTACSHVGLVEEGLQLYR--IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
VL +C+ ++ G +++ + + G++P + ++++ A+ G A+ ++M
Sbjct: 150 NVLASCAAAQALDVGKKVHSFVVKLGQSGVVPV---ANSLLNMYAKCGDSVMAKVVFDRM 206
Query: 539 AFDDDIVVWKSLLA 552
D W ++++
Sbjct: 207 RL-KDTSTWNTMIS 219
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 306/584 (52%), Gaps = 73/584 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y LI+ C++ +SL + +H HIL S H +++ Y KC + +AR +FDEMP
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFGHK-LIDGYIKCSVITEARKLFDEMP 62
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R++V+W +MI+ G+ AIELY ML G++PD +TF +I +A S + G++
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 203 LH--AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
H A V+ E ++ ++ MY KF ++ DA VF + KD+ + ++I G+++
Sbjct: 123 AHGLAVVLGFEVSDGFVA-TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQH 181
Query: 260 -LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
LD EA+ +F +M + P+ T+ S+L
Sbjct: 182 GLD------------------------------GEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPV----------CN------------------- 349
+C + L G IH ++K G S V CN
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 350 ------AILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
++Q+ E+ +F M+ P+H T + ++ AC+++A LE G Q+H +
Sbjct: 272 WTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTV 331
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K G+ + FV L+ +Y KCG++ AR +F+ + + D+VS +++I YAQ G G EAL+
Sbjct: 332 KLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALE 391
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF R++ G+ PN VT + +L AC++ GLVEEG Q++ +++N + I TR+ +C++DLL
Sbjct: 392 LFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLL 451
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RA R EA I + + D++ W++LL +CK HG V++ ++ + +L P + +
Sbjct: 452 GRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHI 510
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
LL NIYAS+GKW+ V + + ++ ++K P SW++I ++H
Sbjct: 511 LLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHT 554
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 51/371 (13%)
Query: 42 FDDIWDFD--LFSSLC----KQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSL 93
FD + D D LF++L + L EAL F ++ RI+P+ Y A ++ +C +L
Sbjct: 160 FDRVLDKDVVLFTALIVGYNQHGLDGEALEVF---EDMVGSRIKPNEYTLASVLVSCGNL 216
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
L G+ +H ++ + +L MY KC +ED+ VF+ + + V+WT+ I
Sbjct: 217 GDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFI 276
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G QNG+E A+ ++ +M++ + P+ FT SI+ ACS L + G Q+HA +K
Sbjct: 277 VGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVD 336
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ ALI +Y K + A +VF S+ DI S +MI +++ F
Sbjct: 337 GNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGF----------- 385
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI- 332
+EA+ LF + L P+ +T S+L AC + + +G QI
Sbjct: 386 -----------------GHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 333 ------HSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
HS + + Y+ C L +A + F ++++ PD I + ++ AC
Sbjct: 429 SLIRNNHSIELTRDHYT----CMIDLLGRA-KRFEEATMLIEEGKNPDVIQWRTLLNACK 483
Query: 387 AMASLEMGTQL 397
+EM +
Sbjct: 484 IHGEVEMAEKF 494
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 190/652 (29%), Positives = 308/652 (47%), Gaps = 70/652 (10%)
Query: 5 CFFICHLPRWCCEYWDAFELCMLLDQAGEVVDSF--LRRFDDIWDFDLFSSLCKQNLYNE 62
+++ ++P E + M L + E D F + D+I +L + NE
Sbjct: 78 AYYVPNMP----ELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNE 133
Query: 63 ALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
AL+ F + ++ + + + AC+ ++ G +H + S + + ++
Sbjct: 134 ALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALV 193
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+MY K G E VF+ M RNVVSWTA+I G G + + +M +S + D
Sbjct: 194 DMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSH 253
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TF ++A + + G+ +HA IK N L MY+K
Sbjct: 254 TFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKC------------- 300
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
K D+ +F +M +P++ SW +I + A+ F M
Sbjct: 301 ---------------RKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMR 345
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
++ P+ T S++ AC + G QIH + ++ G + V N+I+
Sbjct: 346 KSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQ 405
Query: 354 ---------------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
A E F S M KP+ V+ C
Sbjct: 406 EASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCG 465
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+MA LE G Q+H Y + GL + V + L+ MY + G+L A ++F+ +++ D+VSW++
Sbjct: 466 SMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTA 525
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I GYA+ G +EA+ LF + S G+ P++VT +G+LTAC+H GLV+ G Y++M NEY
Sbjct: 526 MINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEY 585
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
I P++E C++DLL RAGR+ EAE + M F D VVW +LL +C+ HG++D A
Sbjct: 586 QIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWA 645
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
AE +L++ P ++ A + L NIY++SG+ EE A + MK +GV K PG SWI
Sbjct: 646 AEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWI 697
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 196/566 (34%), Positives = 298/566 (52%), Gaps = 21/566 (3%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L+ AC++L S+Q G +H H+L Q D + +++MY KC + AR VFDEM
Sbjct: 48 TYPLLLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEM 107
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG--- 198
PQR+VVSW AM++ S+ + A+ L +M G P TF SI+ S L
Sbjct: 108 PQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHL 167
Query: 199 LGRQLHAHVIKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG+ +H +IK +S N+L+ MY +F + +A VF + K I SW +MI G+
Sbjct: 168 LGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGY 227
Query: 258 SKLDF---ARTVFNEMESPNLA----SWNTIIAGVASCSN---ANEAMSLFSEMGDRELI 307
K+ A +F +M+ ++ + +I+G + A+ SL + G E
Sbjct: 228 VKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKD 287
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLM 366
P + ++ C +L +I II+K S + + GE LF M
Sbjct: 288 PVENLLITMYAKCG---NLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRM 344
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+ + +P+ T V+ ACA + SL +G ++ YI GL D V L+ MY KCGS+
Sbjct: 345 IRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSI 404
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS-GVRPNHVTLVGVLTA 485
ARE+F + D D+ W+S+I YA G G EA+ LF +M ++ G+ P+ + V A
Sbjct: 405 VKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLA 464
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
CSH GLVEEGL+ ++ MQ ++GI PT E +C++DLL R G++ A + I M D
Sbjct: 465 CSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQ 524
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
VW LL++C+ HGNV++G+ A +L P +S + VL+ N+Y S GKW+E + SM
Sbjct: 525 VWGPLLSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMD 584
Query: 606 ERGVRKVPGQSWIEIQTKIH--ASGN 629
+G+ K G S +E+ H A GN
Sbjct: 585 GKGLVKESGWSQVEVTDTYHTFAVGN 610
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 236/495 (47%), Gaps = 50/495 (10%)
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+R++ +W MI + NG + +Y M SG+ + T+ +++AC+ L + G
Sbjct: 8 RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK--- 259
LH HV+K + Q AL+ MY+K + A VF + ++ + SW +M+ +S+
Sbjct: 68 LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127
Query: 260 LDFARTVFNEM----ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE---LIPDGLT 312
+D A ++ EM P +++ +I++G ++ + F +G LI G+
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFE-----FHLLGKSIHCCLIKLGIV 182
Query: 313 VRSLLCACTSPLSLY-------QGMQIHSYIIKKGFYSNVPVCNAILQ-HQAGELFRLFS 364
+ A S + +Y + ++ + +K S + ++ A E + LF
Sbjct: 183 YLEVSLA-NSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFY 241
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
M D + F +++ C + L + + +H ++K G V N L+ MY KCG
Sbjct: 242 QMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCG 301
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+L SAR +F+ + + ++SW+S+I GY G EAL LFRRM + +RPN TL V++
Sbjct: 302 NLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVS 361
Query: 485 ACSHVGLVEEGLQLYRIMQNEY----GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
AC+ +G + G ++ EY G+ ++ ++ ++ + ++ G + +A + ++
Sbjct: 362 ACADLGSLSIGQEI-----EEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVT- 415
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRA---------AENILKIDPTNSAALVLLCNIYASS 591
D D+ VW S++ S HG +G A AE I+ D ++ L C + S
Sbjct: 416 DKDLTVWTSMINSYAIHG---MGNEAISLFHKMTTAEGIMP-DAIVYTSVFLAC---SHS 468
Query: 592 GKWEEVARLMGSMKE 606
G EE + SM++
Sbjct: 469 GLVEEGLKYFKSMQK 483
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 66 AFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D + IRP +T A ++SAC+ L SL +G+++ ++I + + D + +++
Sbjct: 337 ALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIH 396
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQF 182
MY KCGS+ AR VF+ + +++ WT+MI + +G N AI L+ +M + G+MPD
Sbjct: 397 MYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAI 456
Query: 183 TFGSIIRAC--SGLCCVGL 199
+ S+ AC SGL GL
Sbjct: 457 VYTSVFLACSHSGLVEEGL 475
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 333/692 (48%), Gaps = 135/692 (19%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISA---------------CSSLRSLQLGRKVHD 104
YN L FDF +NN + R + DL S+ C L +GR+VH
Sbjct: 72 YNRLL--FDFSRNNHD-REALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHC 128
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
L S D + +++MY K ED R +FDEM +NVVSWT++++G ++NG +
Sbjct: 129 QSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDE 188
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
I L QM G+ P+ FTF +++ A + + G Q+HA ++K+ NALI
Sbjct: 189 VIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALIC 248
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF------------------ARTV 266
MY K + + DA VF S+ +D +W MI G++ + F +RTV
Sbjct: 249 MYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTV 308
Query: 267 F-------NEMESPNLASW-----------------NTIIAGVASCSNANEAMSLFS--- 299
F ++ N ++ + CS+ +EA LFS
Sbjct: 309 FCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMAD 368
Query: 300 -----------------------------EMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+M + P+ T ++L P SL
Sbjct: 369 AAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG--KPSSLLS-- 424
Query: 331 QIHSYIIKKGFYSNVP-VCNAILQH--------QAGELF--------------------- 360
Q+H+ II K +Y VP V A+L ++ +F
Sbjct: 425 QLHAQII-KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQT 483
Query: 361 -------RLFSLMLASQTKPDHITFNDVMGAC-AAMASLEMGTQLHCYIMKTGLALDVFV 412
+F ++ KP+ TF+ V+ AC ++ A++E G Q+H +K+G + + V
Sbjct: 484 RDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCV 543
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
+ L+ MY K G++ SA ++F E+ D+VSW+S+I GY Q G ++AL++F+ M++ G+
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGL 603
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+ VT +GVLTAC+H GLVEEG + + IM +Y I E SC+VDL +RAG +A
Sbjct: 604 PLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAM 663
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
D IN M F +W++LLA+C+ H N+++GK AAE ++ + P ++ VLL NI+A +G
Sbjct: 664 DIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAG 723
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
WEE A + M ER V+K G SWIEI+ +I
Sbjct: 724 NWEEKAHVRKLMDERKVKKEAGCSWIEIKNRI 755
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 206/508 (40%), Gaps = 80/508 (15%)
Query: 91 SSLRSLQLGRKV---------HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
SSLR+LQ K+ H + P L++ L A +FDE
Sbjct: 5 SSLRTLQNKAKITVGNGRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDET 64
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P +++ + ++ S+N + A+ L+ + SGL D T ++ C L +GR
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGR 124
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +KS + +L+ MY K + D +F + K++ SW S++ G
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSG----- 179
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+AR N+ E + L ++M + P+G T ++L A
Sbjct: 180 YARNGLND-----------------------EVIHLINQMQMEGVNPNGFTFATVLGALA 216
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAG------------------- 357
+ G+Q+H+ I+K GF VCNA++ G
Sbjct: 217 DESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNI 276
Query: 358 ------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E F++F M + K F + C+ L QLHC ++K G
Sbjct: 277 MIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNG 336
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLF 464
+ LM Y KC S+ A +LF+ + +VV+W+++I G+ Q ++A+ LF
Sbjct: 337 YEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLF 396
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M GVRPNH T VL L + Q I++ Y +P+ + ++D +
Sbjct: 397 CQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQ---IIKAYYEKVPSVA--TALLDAYVK 451
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G V E+ + DIV W ++L
Sbjct: 452 TGNVVESARVFYSIP-AKDIVAWSAMLT 478
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 194/458 (42%), Gaps = 49/458 (10%)
Query: 24 LCMLLDQ-----AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRI 78
+CM L A V DS + R W+ + Y E F ++ ++
Sbjct: 247 ICMYLKSEMVGDAEAVFDSMVVRDSVTWNI-MIGGYAAIGFYLEGFQMFHRMRL-AGVKL 304
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ + + CS R L +++H ++ + + + ++ Y KC S+++A +F
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF 364
Query: 139 DEM-PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
NVV+WTAMI G QN A++L+ QM + G+ P+ FT+ +++
Sbjct: 365 SMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPS---- 420
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
L QLHA +IK+ + AL+ Y K ++++ VF SI KDI +W +M
Sbjct: 421 SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAM---- 476
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+ G+A ++ +AM +F ++ + P+ T S++
Sbjct: 477 ------------------------LTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVI 512
Query: 318 CAC-TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQTKPD 374
AC +S ++ G QIH+ +K G + + V +A+L + G + + Q + D
Sbjct: 513 NACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNI-ESAEKVFTRQEERD 571
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+++N ++ + ++ + GL LD G++ G + + FN
Sbjct: 572 IVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFN 631
Query: 435 FM-----EDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
M D +S ++ Y++ G ++A+ + M
Sbjct: 632 IMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGM 669
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 146/339 (43%), Gaps = 39/339 (11%)
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
S+ +A +F+E +++ +N ++ + ++ EA+ LF ++ L DGLT+ L
Sbjct: 52 SRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCAL 111
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------HQAG----- 357
C G Q+H +K GF +V V +++ + G
Sbjct: 112 KVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVV 171
Query: 358 ----------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
E+ L + M P+ TF V+GA A + +E G Q+H I
Sbjct: 172 SWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMI 231
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K G FV N L+ MY+K +G A +F+ M D V+W+ +I GYA G E
Sbjct: 232 VKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGF 291
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVD 520
++F RMR +GV+ + L CS + QL+ +++N Y ++ R+ ++
Sbjct: 292 QMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF--AQDIRTALMV 349
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
++ V EA + ++V W +++ + N
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNN 388
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 299/594 (50%), Gaps = 58/594 (9%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDARMVF 138
S + LI C SLR L ++ H H++ + D + + M SLE AR VF
Sbjct: 31 SRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVF 87
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCV 197
DE+P+ N +W +I + +I ++ M+ +S P+++TF +I+A + + +
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG+ LH +KS GS + N+LI Y + A VF++I KD+ SW SMI+GF
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 258 SKL---DFARTVFNEMESPNLASWNTIIAGVAS--------------CSN---------- 290
+ D A +F +MES ++ + + + GV S CS
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 291 --ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
AN + ++++ G E + L A ++ + Y I + + + V
Sbjct: 268 TLANAMLDMYTKCGSIE------DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVL 321
Query: 349 NAILQ-------------HQAGE----LFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
N++ Q Q G+ L L L K + IT + ACA + +L
Sbjct: 322 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 381
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E+G +H YI K G+ ++ V + L+ MY KCG L +RE+FN +E DV WS++I G
Sbjct: 382 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 441
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A GCG EA+ +F +M+ + V+PN VT V ACSH GLV+E L+ M++ YGI+P
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
+ +C+VD+L R+G + +A FI M VW +LL +CK H N+++ + A +L
Sbjct: 502 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLL 561
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++P N A VLL NIYA GKWE V+ L M+ G++K PG S IEI IH
Sbjct: 562 ELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + + + A EV++S ++ W+ L S+ + NEAL+ F LQ N ++
Sbjct: 306 DGYAISEDYEAAREVLNSMPQKDIVAWN-ALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T +SAC+ + +L+LGR +H +I + + + + +++MY KCG LE +R VF+
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ +R+V W+AMI G + +G N A++++ +M ++ + P+ TF ++ ACS V
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 200 GRQLHAHVIKSEHG 213
L H ++S +G
Sbjct: 485 AESLF-HQMESNYG 497
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/547 (33%), Positives = 295/547 (53%), Gaps = 49/547 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+Y +IS+ ++ + L R H + DAV N +L Y + G +++AR +FD
Sbjct: 202 SYNVMISSHANHGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSR 257
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ + +SW A++AG Q Q A +++ +M Q D ++ +++ + + R
Sbjct: 258 TEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQR----DVVSWNTMVSGYARRGDMAEAR 313
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-- 259
+L + + + A+++ Y + + +A VF ++ K+ SW +M+ + +
Sbjct: 314 RLFDVAPIRD----VFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRR 369
Query: 260 -LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++ A+ +F+ M N+ASWNT++ G A +EA ++F M + D ++ ++L
Sbjct: 370 MMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQK----DAVSWAAMLA 425
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
A YS + LQ LF M + F
Sbjct: 426 A----------------------YSQIGFSEETLQ--------LFKEMGRCGEWVNRSAF 455
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ CA +A+LE G QLH ++K G + FV N L+ MY KCGS+ A F ME+
Sbjct: 456 ACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEE 515
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
DVVSW+++I GYA+ G G+EAL++F MR + +P+ +TLVGVL ACSH GLVE+G+
Sbjct: 516 RDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISY 575
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ M ++G+ E +C++DLL RAGR+ EA + + M F+ D +W +LL + + H
Sbjct: 576 FYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHR 635
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N ++G+ AAE I +++P N+ VLL NIYASSGKW +V ++ M ERGV+KVPG SWI
Sbjct: 636 NSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWI 695
Query: 619 EIQTKIH 625
E+Q K+H
Sbjct: 696 EVQNKVH 702
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 225/520 (43%), Gaps = 97/520 (18%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ A + RS + D ++ K + + N + + + G + DA +F MP+R+
Sbjct: 79 LRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRST 138
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL--- 203
++ M+AG + NG+ A+ + + + PD F++ +++ A + R L
Sbjct: 139 STYNTMLAGYAANGRLPQALSFFRSIPR----PDSFSYNTLLHALGVSSSLADVRALFDE 194
Query: 204 -------HAHVIKSEHGSH-----------------LISQNALIAMYTKFDRILDAWNVF 239
+V+ S H +H +S N ++A Y + RI +A +F
Sbjct: 195 MPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF 254
Query: 240 SSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
S D SW +++ G+ S+++ A+ +FN+M ++ SWNT+++G A + EA
Sbjct: 255 DSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARR 314
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
LF D +R + T+ +S Y N +L+
Sbjct: 315 LF----------DVAPIRDVFT-WTAIVSGY-------------------AQNGMLE--- 341
Query: 357 GELFRLFSLMLASQTKPDH--ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
E R+F M PD +++N +M A +E +L +V N
Sbjct: 342 -EAKRVFDAM------PDKNAVSWNAMMAAYVQRRMMEEAKEL----FDAMPCRNVASWN 390
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
++ Y + G L AR +F M D VSW++++ Y+Q G EE L+LF+ M G
Sbjct: 391 TMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWV 450
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVD--LLA---RAGRV 528
N VL+ C+ + +E G+QL+ R+++ YG+ C V LLA + G +
Sbjct: 451 NRSAFACVLSTCADIAALECGMQLHSRLIKAGYGV-------GCFVGNALLAMYFKCGSM 503
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
EA +M + D+V W +++A HG GK A E
Sbjct: 504 EEAHSAFEEME-ERDVVSWNTMIAGYARHG---FGKEALE 539
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 15/188 (7%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S +A ++S C+ + +L+ G ++H ++ + + N +L MY KCGS+E+A F+E
Sbjct: 453 SAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEE 512
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVG 198
M +R+VVSW MIAG +++G A+E++ M ++ PD T ++ AC SGL G
Sbjct: 513 MEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKG 572
Query: 199 LGRQLHAH-----VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGS 252
+ H K EH +I + + R+ +A N+ + D T WG+
Sbjct: 573 ISYFYSMHRDFGVATKPEH------YTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGA 626
Query: 253 MIDGFSKL 260
++ G S++
Sbjct: 627 LL-GASRI 633
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
++V N + +++ G + A LF M ++++++ GYA G +AL FR
Sbjct: 105 MEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFR-- 162
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA-- 525
S RP+ + +L A V L R + +E +P ++ S V + + A
Sbjct: 163 --SIPRPDSFSYNTLLHALG----VSSSLADVRALFDE---MPVKDSVSYNVMISSHANH 213
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G V A + + +A + D V W +LA+ +G + + ++ + D + AL+
Sbjct: 214 GLVSLARHYFD-LAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAG- 271
Query: 586 NIYASSGKWEEVARLMGSMKERGV 609
Y + EE ++ M +R V
Sbjct: 272 --YVQRSQIEEAQKMFNKMPQRDV 293
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 209/638 (32%), Positives = 319/638 (50%), Gaps = 88/638 (13%)
Query: 35 VDSFLRRFDDIWDFDL-FSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACS 91
V + RF ++ ++ F L Q AL+ F ++ + I P ST+ ++ AC+
Sbjct: 8 VTPCINRFSTLFTWNSNFRHLVNQGHAQNALILFRQMKQSG---ITPNNSTFPFVLKACA 64
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
L L+ + +H H+L S Q + + ++MY KCG LEDA VF EMP R++ SW A
Sbjct: 65 KLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNA 124
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFT----FGSIIRACSGLCCVG----LGRQL 203
M+ G +Q+G + L M SG+ PD T SI+R S L +G G ++
Sbjct: 125 MLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKS-LTSLGAVYSFGIRI 183
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI--ARKDITSWGSMIDGFSKLD 261
H+ S N LIA Y+K + A +F I + + SW SMI ++ +
Sbjct: 184 GVHMDVS-------VANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYA--N 234
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F + V +A++ + M D PD T+ +LL +C
Sbjct: 235 FEKHV--------------------------KAVNCYKGMLDGGFSPDISTILNLLSSCM 268
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------QHQAGELFR------------ 361
P +L+ G+ +HS+ +K G S+V V N ++ H A LF
Sbjct: 269 QPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTV 328
Query: 362 ----------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
LF+ M A+ KPD +T ++ C +LE+G + Y + G
Sbjct: 329 MISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNG 388
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L +V V N L+DMY KCG A+ELF M + VVSW+++I A G ++AL+LF
Sbjct: 389 LKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFF 448
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M G++PNH+T + VL AC+H GLVE GL+ + +M +YGI P + SC+VDLL R
Sbjct: 449 MMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRK 508
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G + EA + I M F+ D +W +LL++CK HG +++GK +E + +++P + V +
Sbjct: 509 GHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMA 568
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
NIYAS+ WE VA + +MK VRK PGQS I++ K
Sbjct: 569 NIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGK 606
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 325/647 (50%), Gaps = 76/647 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C + + EV + ++ W L + +++E + F F
Sbjct: 143 DMYMKCGSVCEGIEVFEGMPKKNVVTWT-SLLTGCAHAQMHSEVMALF-FRMRAEGIWPN 200
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P T+A ++SA +S +L LG++VH + C+ + N ++NMY KCG +EDA+ VF+
Sbjct: 201 PFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFN 260
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M R++VSW ++AG N E A++L+ + + Q T+ ++I+ C+ L + L
Sbjct: 261 WMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320
Query: 200 GRQLHAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
RQLH+ V+K HG HL AL Y+K + DA N+FS M G
Sbjct: 321 ARQLHSCVLK--HGFHLTGNVMTALADAYSKCGELADALNIFS------------MTTG- 365
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
S N+ SW II+G + A+ LFS M + ++P+ T ++L
Sbjct: 366 --------------SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML 411
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
A S L QIH+ +IK Y ++P L
Sbjct: 412 KASLSILP----PQIHAQVIKTN-YQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDV 466
Query: 353 ---------QHQAGE---LFRLFSLMLASQTKPDHITFNDVMGACA-AMASLEMGTQLHC 399
QAG+ LF+ M KP+ T + V+ ACA A ++ G Q H
Sbjct: 467 VAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHA 526
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+K + V + L+ MY + G++ SA+ +F D D+VSW+S+I GYAQ G +
Sbjct: 527 ISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMK 586
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
A++ FR+M +SG++ + VT + V+ C+H GLV EG Q + M ++ I PT E +C+V
Sbjct: 587 AIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMV 646
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DL +RAG++ E I M F +VW++LL +C+ H NV++GK +A+ +L ++P +S+
Sbjct: 647 DLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSS 706
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIYA++GKW+E + M R V+K G SWI+I+ K+H+
Sbjct: 707 TYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHS 753
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 255/554 (46%), Gaps = 81/554 (14%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD---AVLHNHILNMYGKCGSLEDA 134
+ +T + ++ AC S+ LG ++H L KC D +++MY KCGS+ +
Sbjct: 97 VDSATLSCVLKACRSVPDRVLGEQLH--CLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG 154
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
VF+ MP++NVV+WT+++ GC+ + + L+ +M G+ P+ FTF S++ A +
Sbjct: 155 IEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQ 214
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ LG+++HA +K S + N+L+ MY K + DA +VF+ + +D
Sbjct: 215 GALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRD-------- 266
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE----MGDRELIPDG 310
+ SWNT++AG+ EA+ LF E MG
Sbjct: 267 --------------------MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYA 306
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY--SNVPVCNAILQHQAGEL---FRLFSL 365
++ LCA L+L + Q+HS ++K GF+ NV A + GEL +FS+
Sbjct: 307 TVIK--LCANLKQLALAR--QLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSM 362
Query: 366 ---------------------------MLASQTKPDHITFNDVMGACAAMASLE-MGTQL 397
+L S+ + D + N+ + ASL + Q+
Sbjct: 363 TTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQI 422
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H ++KT FV L+ Y K GS A +F +E DVV+WS+++ +AQ G
Sbjct: 423 HAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDC 482
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACS-HVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
E A LF +M G++PN T+ V+ AC+ V++G Q + I +Y S
Sbjct: 483 EGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI-SIKYRYHDAICVSS 541
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILK 572
+V + +R G + A+ + + D D+V W S+++ HG ++ ++ + ++
Sbjct: 542 ALVSMYSRKGNIDSAQ-IVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQ 600
Query: 573 IDPTNSAALVLLCN 586
+D A+++ C
Sbjct: 601 MDGVTFLAVIMGCT 614
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 191/463 (41%), Gaps = 83/463 (17%)
Query: 134 ARMVFDEMPQRNV-VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
AR DE+P+R+ V ++ ++ G ++ + + G++ D T +++AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQ-NALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
+ LG QLH +K H +S +L+ MY K + + VF + +K++ +W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA---NEAMSLFSEMGDRELIP 308
S++ G C++A +E M+LF M + P
Sbjct: 171 SLLTG-------------------------------CAHAQMHSEVMALFFRMRAEGIWP 199
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----------- 357
+ T S+L A S +L G ++H+ +K G S+V VCN+++ A
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVF 259
Query: 358 -------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
E +LF A+ K T+ V+ CA + L
Sbjct: 260 NWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLA 319
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGY 451
+ QLH ++K G L VM L D Y KCG L A +F+ +VVSW+++I G
Sbjct: 320 LARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
Q G A+ LF RMR V PN T +L A + + Q +++ Y IP
Sbjct: 380 IQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQ---VIKTNYQHIPF 436
Query: 512 RERRSCVVDLLARAGRVHEAEDFIN--QMAFDDDIVVWKSLLA 552
LLA + ED ++ +M D+V W ++L+
Sbjct: 437 -----VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS 474
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 319/653 (48%), Gaps = 77/653 (11%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C + C + +A +V + R+ W + C+Q Y+ AL F +Q
Sbjct: 43 CGHLIQMYAQCGSVPEAQQVFEILERKDVFAWT-RMIGIYCQQGDYDRALGMFYQMQEED 101
Query: 75 NFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
+ P+ TY +++AC+S SL+ G ++H IL + D + ++NMY KCGS+
Sbjct: 102 ---VMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVR 158
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
A F + R+VVSWTAMIA C Q+ Q A LY +M G++P++ T ++ A
Sbjct: 159 GAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYG 218
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
H +S+ I V S + D+ S
Sbjct: 219 D--------------------PHYLSEGKFIYSL-----------VSSRVMESDVRVMNS 247
Query: 253 MIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
++ F L AR +F +M ++ +WN +I N EA+ LF + + +
Sbjct: 248 AMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKAN 307
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF- 360
+T +L TS SL +G IH + + G+ +V V A++ QA ++F
Sbjct: 308 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFV 367
Query: 361 ---------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+LF M +P T V+ CA +A+L+
Sbjct: 368 DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK 427
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G Q+H +I++ G +++ V L++MY KCG + AR +F M D++ W+S++ YAQ
Sbjct: 428 GRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQ 487
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G +E L+LF +M+ G + + V+ V VL+A SH G V +G Q + M ++ I PT E
Sbjct: 488 HGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPE 547
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAF-DDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
CVVDLL RAGR+ EA D + +++ D ++W +LL +C+TH D K AAE +L+
Sbjct: 548 LYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLE 607
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
DP++S A V+L N+YA++G W+ V R+ M+ RGV+K PG+S IEI ++H
Sbjct: 608 RDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVH 660
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 306/582 (52%), Gaps = 32/582 (5%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A++ ++ +F + P T+ ++ + L +G++VH I+ + + +L+
Sbjct: 86 AWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLD 145
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY KC + DA MVF +P+RN VSW A+IAG G + A L M + G+ D T
Sbjct: 146 MYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGT 205
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWNVFS- 240
F ++ L QLH +IK HG + NA I Y++ + DA VF
Sbjct: 206 FSPLLTLLDEKKFYKLTMQLHCKIIK--HGVQFDNTVCNATITSYSQCGSLEDAERVFDG 263
Query: 241 SIARKDITSWGSMIDGFSKLDFART---VFNEME----SPNLASWNTIIAGVASCSNANE 293
++ +D+ +W SM+ F D T +F +M+ P++ ++ TII+ + N
Sbjct: 264 AVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKS 323
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTS-----PLSLYQGMQIHSYI----IKKGFYSN 344
L + G +L+P V ++ +S L+++ M+ + I GF
Sbjct: 324 LHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQT 383
Query: 345 VPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
NA+ +LF M + DH F+ V+ +C+ +A+L++G Q+H +K+
Sbjct: 384 GHSENAL---------KLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKS 434
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + FV + L+ MY KCG + AR+ F ++W+S++ YAQ G G+ AL LF
Sbjct: 435 GFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLF 494
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+MR V+ +H+T V LTACSH+GLVE+G L + M ++YGI P E +C VDL R
Sbjct: 495 FQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGR 554
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + EA+ I M FD D +VWK+LL +C+ G++++ + A ++L+++P V+L
Sbjct: 555 AGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVIL 614
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N+Y +W+E A + M+ER V+KVPG SWIE++ ++HA
Sbjct: 615 SNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHA 656
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 239/526 (45%), Gaps = 88/526 (16%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC--GSLEDARM 136
+ + Y I+ C ++++LGR D N+IL+ Y +C G L A
Sbjct: 12 KHALYNIFITHC---QTIKLGR-----------SADIYATNNILSRYTRCSSGGLTFACN 57
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+FDEM R+ V+W MI+G +G +A ELY M GLMPD +TFGSI++ + C
Sbjct: 58 LFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACR 117
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ +G+Q+H+ ++K + H+ + +AL+ MY K +R+ DA+ VF I R++ SW ++I G
Sbjct: 118 LDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAG 177
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F ++ G + + A L M + + D T L
Sbjct: 178 F-----------------------VLEG-----DHDTAFWLLRCMEEEGVRLDDGTFSPL 209
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL--------------- 359
L MQ+H IIK G + VCNA + Q G L
Sbjct: 210 LTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRD 269
Query: 360 --------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
F+LF M +PD T+ ++ AC+ + G LH
Sbjct: 270 LVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHK---DNGKSLHG 326
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCG--SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
++K GL V + N ++ MY++ S+ A +F+ ME D VSW+S++ G++Q G
Sbjct: 327 LVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHS 386
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E ALKLF MR + V +H VL +CS + ++ G Q++ ++ + G S
Sbjct: 387 ENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIH-VLTVKSGFESNDFVASS 445
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
++ + ++ G + +A + A D I W S++ + HG DV
Sbjct: 446 LIFMYSKCGMIEDARKSFEKTAKDSSI-TWNSIMFAYAQHGQGDVA 490
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 325/646 (50%), Gaps = 74/646 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C + + EV + ++ W L + +++E + F F
Sbjct: 143 DMYMKCGSVCEGIEVFEGMPKKNVVTWT-SLLTGCAHAQMHSEVMALF-FRMRAEGIWPN 200
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P T+A ++SA +S +L LG++VH + C+ + N ++NMY KCG +EDA+ VF+
Sbjct: 201 PFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFN 260
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M R++VSW ++AG N E A++L+ + + Q T+ ++I+ C+ L + L
Sbjct: 261 WMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320
Query: 200 GRQLHAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
RQLH+ V+K HG HL AL Y+K + DA N+FS M G
Sbjct: 321 ARQLHSCVLK--HGFHLTGNVMTALADAYSKCGELADALNIFS------------MTTG- 365
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
S N+ SW II+G + A+ LFS M + ++P+ T ++L
Sbjct: 366 --------------SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML 411
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------- 352
A S L QIH+ +IK + V A+L
Sbjct: 412 KASLSILP----PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVV 467
Query: 353 --------QHQAGE---LFRLFSLMLASQTKPDHITFNDVMGACA-AMASLEMGTQLHCY 400
QAG+ LF+ M KP+ T + V+ ACA A ++ G Q H
Sbjct: 468 AWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI 527
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K + V + L+ MY + G++ SA+ +F D D+VSW+S+I GYAQ G +A
Sbjct: 528 SIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKA 587
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
++ FR+M +SG++ + VT + V+ C+H GLV EG Q + M ++ I PT E +C+VD
Sbjct: 588 IETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVD 647
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
L +RAG++ E I M F +VW++LL +C+ H NV++GK +A+ +L ++P +S+
Sbjct: 648 LYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSST 707
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIYA++GKW+E + M R V+K G SWI+I+ K+H+
Sbjct: 708 YVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHS 753
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 254/554 (45%), Gaps = 81/554 (14%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD---AVLHNHILNMYGKCGSLEDA 134
+ +T + ++ AC S+ LG ++H L KC D +++MY KCGS+ +
Sbjct: 97 VDSATLSCVLKACRSVPDRVLGEQLH--CLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG 154
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
VF+ MP++NVV+WT+++ GC+ + + L+ +M G+ P+ FTF S++ A +
Sbjct: 155 IEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQ 214
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ LG+++HA +K S + N+L+ MY K + DA +VF+ + +D
Sbjct: 215 GALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRD-------- 266
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE----MGDRELIPDG 310
+ SWNT++AG+ EA+ LF E MG
Sbjct: 267 --------------------MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYA 306
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY--SNVPVCNAILQHQAGEL---FRLFSL 365
++ LCA L+L + Q+HS ++K GF+ NV A + GEL +FS+
Sbjct: 307 TVIK--LCANLKQLALAR--QLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSM 362
Query: 366 ---------------------------MLASQTKPDHITFNDVMGACAAMASLE-MGTQL 397
+L S+ + D + N+ + ASL + Q+
Sbjct: 363 TTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQI 422
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H ++KT V L+ Y K GS A +F +E DVV+WS+++ +AQ G
Sbjct: 423 HAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDC 482
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACS-HVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
E A LF +M G++PN T+ V+ AC+ V++G Q + I +Y S
Sbjct: 483 EGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI-SIKYRYHDAICVSS 541
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILK 572
+V + +R G + A+ + + D D+V W S+++ HG ++ ++ + ++
Sbjct: 542 ALVSMYSRKGNIDSAQ-IVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQ 600
Query: 573 IDPTNSAALVLLCN 586
+D A+++ C
Sbjct: 601 MDGVTFLAVIMGCT 614
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 192/463 (41%), Gaps = 83/463 (17%)
Query: 134 ARMVFDEMPQRNV-VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
AR DE+P+R+ V ++ ++ G ++ + + G++ D T +++AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQ-NALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
+ LG QLH +K H +S +L+ MY K + + VF + +K++ +W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA---NEAMSLFSEMGDRELIP 308
S++ G C++A +E M+LF M + P
Sbjct: 171 SLLTG-------------------------------CAHAQMHSEVMALFFRMRAEGIWP 199
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----------- 357
+ T S+L A S +L G ++H+ +K G S+V VCN+++ A
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVF 259
Query: 358 -------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
E +LF A+ K T+ V+ CA + L
Sbjct: 260 NWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLA 319
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGY 451
+ QLH ++K G L VM L D Y KCG L A +F+ +VVSW+++I G
Sbjct: 320 LARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
Q G A+ LF RMR V PN T +L A + + Q +++ Y IP
Sbjct: 380 IQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQ---VIKTNYQHIP- 435
Query: 512 RERRSCVVDLLARAGRVHEAEDFIN--QMAFDDDIVVWKSLLA 552
S LLA + ED ++ +M D+V W ++L+
Sbjct: 436 ----SVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS 474
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 309/609 (50%), Gaps = 81/609 (13%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D ++ FR+ P+ T+ ++ ACS+L L+ GR +H H ++ D + +++
Sbjct: 84 AIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALID 143
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQF 182
+Y +C AR VF +MP R+VV+W AM+AG + +G + AI + M GL P+
Sbjct: 144 LYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS 203
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKS---EHGSHLISQNALIAMYTKFDRILDAWNVF 239
T S++ + + G +HA+ +++ ++ ++ AL+ MY K +++
Sbjct: 204 TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV------ 257
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+A VF+ M N +W+ +I G C EA +LF
Sbjct: 258 ----------------------YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFK 295
Query: 300 EMGDRELIPDGL------TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL- 352
+M + +GL +V S L C S L+ G Q+H+ I K G ++++ N++L
Sbjct: 296 DM-----LVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLS 350
Query: 353 -----------------------------------QHQAGELFRLFSLMLASQTKPDHIT 377
+A E F +F M A +PD T
Sbjct: 351 MYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIAT 410
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
++ AC+ +A+L+ G H ++ GLAL+ + N L+DMY KCG + +R++F+ M
Sbjct: 411 MVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP 470
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DVVSW+++I GY G G+EA LF M++ G P+ VT + ++ ACSH GLV EG
Sbjct: 471 ARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH 530
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ M ++YGI+P E C+VDLLAR G + EA FI M D+ VW +LL +C+ H
Sbjct: 531 WFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH 590
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N+D+GK+ + I K+ P + VLL NI++++G+++E A + K +G +K PG SW
Sbjct: 591 KNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSW 650
Query: 618 IEIQTKIHA 626
IEI +HA
Sbjct: 651 IEINGSLHA 659
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 221/490 (45%), Gaps = 96/490 (19%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G L AR VFD +P + ++ A+I S G +AAI+LY ML+ + P+++TF ++
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+ACS L + GR +HAH + + L ALI +Y + R A NVF+ + +D+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-ELI 307
+W N ++AG A+ + A++ +M D L
Sbjct: 168 AW----------------------------NAMLAGYANHGMYHHAIAHLLDMQDHGGLR 199
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN----------------------- 344
P+ T+ SLL +L+QG IH+Y ++ N
Sbjct: 200 PNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYA 259
Query: 345 ------VPVCNA----------ILQHQAGELFRLFSLMLA------SQTKPDHITFNDVM 382
+PV N +L + E F LF ML S T + +
Sbjct: 260 CRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSAT-----SVASAL 314
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
CA++A L MGTQLH I K+G+ D+ N L+ MY K G + A F+ + D +
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
S+ +L+ G Q G EEA +F++M++ + P+ T+V ++ ACSH+ ++ G
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG------- 427
Query: 503 QNEYGIIPTR----ERRSC--VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ +G + R E C ++D+ A+ G++ + ++M D+V W +++A
Sbjct: 428 KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP-ARDVVSWNTMIAGYGI 486
Query: 557 HGNVDVGKRA 566
HG +GK A
Sbjct: 487 HG---LGKEA 493
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 157/361 (43%), Gaps = 46/361 (12%)
Query: 245 KDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
KD W ++ +L AR VF+ + +P+ ++N +I + + A+ L+ M
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQA 356
+ P+ T +L AC++ + L G IH++ G ++++ V A++ +
Sbjct: 92 LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151
Query: 357 GELFRLFS-----------LMLASQT---------------------KPDHITFNDVMGA 384
G +F+ MLA +P+ T ++
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211
Query: 385 CAAMASLEMGTQLHCYIMKTGLALD---VFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
A +L GT +H Y ++ L + V + L+DMY KC L A +F+ M +
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGV-RPNHVTLVGVLTACSHVGLVEEGLQLYR 500
V+WS+LI G+ EA LF+ M G+ + ++ L C+ + + G QL+
Sbjct: 272 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHA 331
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
++ GI + ++ + A+AG ++EA F +++A D I + +LL+ C +G
Sbjct: 332 LIAKS-GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI-SYGALLSGCVQNGKA 389
Query: 561 D 561
+
Sbjct: 390 E 390
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 302/582 (51%), Gaps = 71/582 (12%)
Query: 86 LISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
L+ S S++LGR VH I+ + P L N+++NMY K E AR+V P R
Sbjct: 12 LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NVVSWT++++G +QNG + A+ + +M + G+ P+ FTF + +A + L G+Q+H
Sbjct: 72 NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIH 131
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
A +K RILD VF + D+ + D AR
Sbjct: 132 ALAVKC-------------------GRILD---VFVGCSAFDMYCKTRLRDD------AR 163
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+F+E+ NL +WN I+ + EA+ F E P+ +T L AC+ L
Sbjct: 164 KLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGL 223
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQAGELFRLFSLM----------- 366
L GMQ+H + + GF ++V V N ++ Q ++ E+ +F+ M
Sbjct: 224 LLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEI--IFAEMGMKNAVSWCSL 281
Query: 367 ---------------LASQTKPDHITFND-----VMGACAAMASLEMGTQLHCYIMKTGL 406
L +++ + + +D V+ ACA MA LE+G +H + +K +
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
++FV + L+DMY KCG + + + F+ M + ++V+ +SLI GYA G + AL LF
Sbjct: 342 ERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFED 401
Query: 467 M--RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M R G PN++T V +L+ACS G VE G++++ M++ YGI P E SC+VD+L R
Sbjct: 402 MAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGR 461
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG V +A +FI +M I VW +L +C+ HG +G AAEN+ K+DP +S VLL
Sbjct: 462 AGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLL 521
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N +A++G+W E + MK G++K G SWI ++ ++HA
Sbjct: 522 SNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHA 563
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 146/306 (47%), Gaps = 15/306 (4%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLC--KQNLYNEALVAFDFLQNN 73
C +D + L D A ++ D R + W+ + +S+ + EA + F +
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQ 206
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
N T+ ++ACS L LG ++H + S D ++N +++ YGKC +
Sbjct: 207 PN----SITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRS 262
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
+ ++F EM +N VSW +++A QN ++ A LY++ + + F S++ AC+G
Sbjct: 263 SEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAG 322
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+ + LGR +HAH +K+ ++ +AL+ MY K I D+ F + K++ + S+
Sbjct: 323 MAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSL 382
Query: 254 IDGFS---KLDFARTVFNEM------ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
I G++ ++D A +F +M +PN ++ ++++ + M +F M
Sbjct: 383 IGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKST 442
Query: 305 ELIPDG 310
I G
Sbjct: 443 YGIEPG 448
>gi|225437951|ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 293/535 (54%), Gaps = 57/535 (10%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+ V +++ Y + G++++ +F +MP+RNVVSWTAMI G + NG A+ L+++M
Sbjct: 230 NVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMK 289
Query: 174 QS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI-----KSEHGSHLISQNALIAMYT 227
+ + P+ TF S+ AC+G+ LG Q HAH+I ++ L +LI MY+
Sbjct: 290 GNYDMKPNDETFISLAYACAGIGFPHLGMQFHAHLIINCWDYDDYDGRLF--KSLIHMYS 347
Query: 228 KFDRILDAWNVF-SSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIA 283
F + AW +F + + S SMI+G+ +L+ A+++F+ + + SW ++I
Sbjct: 348 MFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMIN 407
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G + +A LF+ M DR+ + + V
Sbjct: 408 GYFNVGQIAKACYLFNNMPDRDAVAWTVMVSG---------------------------- 439
Query: 344 NVPVCNAILQHQAGELF----RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
H ELF LFS M P + TF+ ++GA AMA L+ G Q HC
Sbjct: 440 ----------HVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHC 489
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+MKT D+ + N L+ MY KCG +G A +F+ M D++SW+S+I+G++ G E
Sbjct: 490 LLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSE 549
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
ALK+F M +SG PN VT +G+L+ACSH GL+ +G +L+ M + + I P E C+V
Sbjct: 550 ALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMV 609
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG-NVDVGKRAAENILKIDPTNS 578
+LL RAG+V EAE+FI+++ F+ D+ +W +LL C N V +RAA+ +L++DP N+
Sbjct: 610 NLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLELDPLNA 669
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK--IHASGNDI 631
A V+LCNI+AS G+ E +L M +GVRKVPG SWI ++ + + SG+ I
Sbjct: 670 PAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDRI 724
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 217/474 (45%), Gaps = 33/474 (6%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+ + V +N +L+ Y +CG L DA F+EMP+RNVVSWT+++ G + G+ A EL+
Sbjct: 104 ERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNV 163
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + ++ +IR+ R + +KS+ +S N +IA Y + R
Sbjct: 164 MPERNVVSWNSMLVGLIRSGQ---LEEARRVFNEMPVKSQ-----VSWNVMIAGYAEHSR 215
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASC 288
+ +A +F + +++ +W SMI G+ + + +F +M N+ SW +I G A
Sbjct: 216 MEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWN 275
Query: 289 SNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
EA+ LF EM G+ ++ P+ T SL AC + GMQ H+++I + +
Sbjct: 276 GFYKEALLLFLEMKGNYDMKPNDETFISLAYACAGIGFPHLGMQFHAHLIINCW--DYDD 333
Query: 348 CNAILQHQAGELFRLFSLM-------LASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ L ++ +F M + + + N ++ + LE L
Sbjct: 334 YDGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSL--- 390
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
T D +++ Y G + A LFN M D D V+W+ ++ G+ Q EA
Sbjct: 391 -FDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEA 449
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM---QNEYGIIPTRERRSC 517
LF MR GV P + T +L A + +++G Q + ++ Q E+ +I ++
Sbjct: 450 TYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLI----LQNS 505
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
++ + A+ G + +A ++M D++ W S++ HG + E +L
Sbjct: 506 LISMYAKCGEIGDAYSIFSKM-ISRDLISWNSMIMGFSHHGLTSEALKVFEAML 558
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 133/318 (41%), Gaps = 73/318 (22%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD---- 114
Y EAL+ F ++ N + + T+ L AC+ + LG + H H++ + D
Sbjct: 277 FYKEALLLFLEMKGNYDMKPNDETFISLAYACAGIGFPHLGMQFHAHLIINCWDYDDYDG 336
Query: 115 ----AVLH---------------------------NHILNMYGKCGSLEDARMVFD---- 139
+++H N ++N Y + G LE A+ +FD
Sbjct: 337 RLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPV 396
Query: 140 ---------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
MP R+ V+WT M++G QN A L+ +M
Sbjct: 397 RDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEM 456
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
G+ P TF ++ A + + GRQ H ++K++ LI QN+LI+MY K I
Sbjct: 457 RVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEI 516
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMES----PNLASWNTIIAGV 285
DA+++FS + +D+ SW SMI GFS A VF M + PN ++ I++
Sbjct: 517 GDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSAC 576
Query: 286 ASCSNANEAMSLFSEMGD 303
+ N+ LF M D
Sbjct: 577 SHAGLLNQGWELFDAMSD 594
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+V N ++ YV+CG L A F M + +VVSW+SL+ G A G EA +LF M
Sbjct: 106 NVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMP 165
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
V + LVG++ + G +EE +++ M + ++ + ++ A R+
Sbjct: 166 ERNVVSWNSMLVGLIRS----GQLEEARRVFNEMP-----VKSQVSWNVMIAGYAEHSRM 216
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA + M D ++V W S+++ GNV G + K+ N + + +
Sbjct: 217 EEARVLFDGMG-DRNVVTWTSMISGYCRAGNVQEGYCLFQ---KMPERNVVSWTAMIGGF 272
Query: 589 ASSGKWEEVARLMGSMK 605
A +G ++E L MK
Sbjct: 273 AWNGFYKEALLLFLEMK 289
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
VV W+SL+ +++ G +EA LF M V VT +L+ G + + + +
Sbjct: 76 VVCWTSLLSKFSKNGFIDEARALFEIMPERNV----VTYNAMLSGYVQCGRLSDACRFFE 131
Query: 501 IMQNEYGIIPTRERRSCVVDL--LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
M P R S L LA AGR+ EA + N M + ++V W S+L G
Sbjct: 132 EM-------PERNVVSWTSLLCGLANAGRIGEARELFNVMP-ERNVVSWNSMLVGLIRSG 183
Query: 559 NVDVGKRAAENILKIDPTNS-AALVLLCNIYASSGKWEEVARLMGSMKERGV 609
++ +R + P S + ++ YA + EE L M +R V
Sbjct: 184 QLEEARRVFNEM----PVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNV 231
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 212/727 (29%), Positives = 357/727 (49%), Gaps = 132/727 (18%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNN---TNFRI 78
+ C LL A + ++ R W + S L+ EA + F LQ + +F +
Sbjct: 104 YARCGLLKDADFLFETMPMRNLHSWK-AILSVYLDHGLFEEAFLLFQVLQFDGVELDFFV 162
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
P + ACS L S++LGR++H ++ + + + N +++MYGKCGSL+DA+ V
Sbjct: 163 FPLVF----KACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVL 218
Query: 139 DEMPQR------------------------------------NVVSWTAMIAGCSQNGQE 162
+MP+R NVVSW+A+I G +QNG +
Sbjct: 219 VKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYD 278
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------- 215
AIE+ +M GL+P+ T ++ AC+ L + LG+QLH ++ + + S+
Sbjct: 279 EEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNAL 338
Query: 216 ------------------------LISQNALIAMYTKFDRILDAWNVFSSI----ARKDI 247
++S N +I Y + + A +F + + +
Sbjct: 339 VDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGL 398
Query: 248 TSWGSMIDGFSK---LDFARTVFNEM--------ESPNLASWNT---------------- 280
SW S+I G+ + D A ++F M +S L S T
Sbjct: 399 ISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHA 458
Query: 281 --IIAGVAS--------------CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
I+ G+ S C + A F E+ +++ +P T +L+ T
Sbjct: 459 QAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKD-VP---TWNALISGYTRSN 514
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFN 379
+ + + + G++ N+ N+IL Q +LFS M S+ +PD T
Sbjct: 515 QIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVG 574
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
++ AC+ +A+LE G Q H + +K G DV + L+DMY KCGSL A+ ++ + +P
Sbjct: 575 IILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNP 634
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
++VS ++++ A G GEE + LF+ M + G P+HVT + VL++C HVG VE G + +
Sbjct: 635 NLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFF 694
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+M Y + PT + + +VDLL+R+G++HEA + I +M + D V+W +LL C THGN
Sbjct: 695 DLM-GYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGN 753
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+++G+ AAE +++++P NS VLL N++A + +W ++AR+ G MK+RG+ K PG SWIE
Sbjct: 754 IELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKSPGCSWIE 813
Query: 620 IQTKIHA 626
+ +IH+
Sbjct: 814 DKNEIHS 820
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 238/507 (46%), Gaps = 70/507 (13%)
Query: 71 QNNTNFRI---RP---STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
+N +NF + +P S YA ++ +C + +LG++VH H + + D + +L M
Sbjct: 47 KNRSNFSLLDNKPLNTSKYASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKLLQM 103
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y +CG L+DA +F+ MP RN+ SW A+++ +G A L+ + G+ D F F
Sbjct: 104 YARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVF 163
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+ +ACSGL V LGRQLH VIK ++ NALI MY K + DA V +
Sbjct: 164 PLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPE 223
Query: 245 KDITSWGSMIDG-------FSKLDFARTVFN-EMESPNLASWNTIIAGVASCSNANEAMS 296
+D +W S+I + L+F + + + PN+ SW+ +I G A EA+
Sbjct: 224 RDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIE 283
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
+ M L+P+ T+ +L AC L G Q+H YI + F SN V NA++
Sbjct: 284 MLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALV---- 339
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
+++R D+ GA + L C M G
Sbjct: 340 -DVYR---------------RCGDMGGAAKIFLKFSVKNVLSCNTMIVG----------- 372
Query: 417 MDMYVKCGSLGSARELFNFME----DPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSG 471
Y + G + A+ELF+ M+ + ++SW+S+I GY + +EA +F+ M G
Sbjct: 373 ---YCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEG 429
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLY--RIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
+ P+ TL VLTAC+ + +G +++ I++ G+ +V++ ++ +
Sbjct: 430 IEPDSFTLGSVLTACADTISLRQGKEIHAQAIVK---GLQSDTFVGGALVEMYSKCQDLT 486
Query: 530 EAEDFINQMAFDD----DIVVWKSLLA 552
A Q+AFD+ D+ W +L++
Sbjct: 487 AA-----QVAFDEVMEKDVPTWNALIS 508
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 325/646 (50%), Gaps = 80/646 (12%)
Query: 32 GEVVDSFLRRFDDIWD-FDLFSSLCKQNLYNEALV------------AFDFLQNNTNFRI 78
G + S L RF + W + +F+ + ++++++ ++ A D
Sbjct: 132 GNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGA 191
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP T+ ++ +C + L +GR+VH H+L + + N ++ MY KCG +E AR
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARK 251
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD M + +SW AMIAG +N + A +EL++ ML+ + P+ T S+ A L
Sbjct: 252 VFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD 311
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ +++HA +K + + N+LI MY+ R+ +A
Sbjct: 312 LDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEAC-------------------- 351
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
TVF+ ME+ + SW +I+G ++A+ +++ M + PD +TV S
Sbjct: 352 --------TVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASA 403
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L AC S L G+++H KGF + V NA+++
Sbjct: 404 LAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDV 463
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
H+ E F MLA KP+ +TF + ACAA SL G ++H +
Sbjct: 464 ISWSSMIAGFCFNHKNFEALYYFRHMLA-DVKPNSVTFIAALAACAATGSLRCGKEIHAH 522
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+++ G+A + +V N L+D+YVKCG G A F DVVSW+ ++ G+ G G+ A
Sbjct: 523 VLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIA 582
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L F M +G P+ VT V +L CS G+V +G +L+ M +Y I+P + +C+VD
Sbjct: 583 LSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVD 642
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL+R GR+ E +FIN+M D VW +LL C+ H N+++G+ AA+ +L+++P ++
Sbjct: 643 LLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGY 702
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL ++YA +G W EV+++ +M+ +G+ G SW+E++ IHA
Sbjct: 703 HVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHA 748
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/564 (27%), Positives = 248/564 (43%), Gaps = 70/564 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y L C R+ + G + H ++ L N +L+M + G A VF +M
Sbjct: 96 AYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKM 155
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+V SW M+ G + G A++LY +ML +G PD +TF ++R+C G+ + +GR
Sbjct: 156 PERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGR 215
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++HAHV++ G + NAL+ MY K + A VF ++ D S
Sbjct: 216 EVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCIS------------ 263
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
WN +IAG + LF M + E+ P+ +T+ S+ A
Sbjct: 264 ----------------WNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASG 307
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFS------------ 364
L +IH+ +K+GF ++V CN+++Q + GE +FS
Sbjct: 308 LLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTA 367
Query: 365 -------------------LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
LM + PD +T + ACA++ L++G +LH G
Sbjct: 368 MISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKG 427
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ V N L++MY K + A E+F +M D DV+SWSS+I G+ EAL FR
Sbjct: 428 FIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFR 487
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M + V+PN VT + L AC+ G + G +++ + + GI + ++DL +
Sbjct: 488 HMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQ-GIASEGYVPNALLDLYVKC 545
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI--DPTNSAALVL 583
G+ A D+V W +LA HG+ D+ +L+ P + L
Sbjct: 546 GQTGYAWAQFGAHG-TKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVAL 604
Query: 584 LCNIYASSGKWEEVARLMGSMKER 607
LC + +G + L SM E+
Sbjct: 605 LCGC-SRAGMVSQGWELFHSMTEK 627
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/577 (29%), Positives = 304/577 (52%), Gaps = 69/577 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L++AC+ L++L+ GR++H+H++ + + D L +L MY KCGSL+DA+ VF+ M ++
Sbjct: 36 LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 95
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+ +W+++IA ++ G+ A+ LY +M+ G+ P+ TF + C+ + + GR +H
Sbjct: 96 LFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 155
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++ S+ + Q++L+ MY K D +++A R
Sbjct: 156 RILASKVPQDDVLQDSLLNMYLKCDEMVEA----------------------------RK 187
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPL 324
VF M++ N+ S+ +I+ EA+ LFS M E I P+ T ++L A
Sbjct: 188 VFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 247
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------------- 352
+L +G ++H ++ +GF +NV V NA++
Sbjct: 248 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIA 307
Query: 353 ---QH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
QH E LF M +P ++F+ + ACA + +L+ G ++H +++ LA
Sbjct: 308 AYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLA- 363
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ L+ MY +CGSL AR +FN M+ D S +++I + Q G ++AL+++R+M
Sbjct: 364 SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKME 423
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G+ + +T V VL ACSH LV + + + ++G++P E C+VD+L R+GR+
Sbjct: 424 QEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRL 483
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
+AE+ + M + D V W +LL+ CK HG++D G+RAA + ++ P + V L N+Y
Sbjct: 484 GDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMY 543
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A++ ++++ R+ M+ERGV + S+IEI ++H
Sbjct: 544 AAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELH 580
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 215/418 (51%), Gaps = 17/418 (4%)
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
MIA C + G+ A+EL+ +M + G++ D+F S++ AC+ L + GR+LH H+I +
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-------LDFAR 264
+ + + AL+ MY K + DA VF + KD+ +W S+I +++ + R
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+ E PN+ ++ + G AS + + ++ + ++ D + SLL
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQT-KPDHITFNDVM 382
+ + ++ + + S + +A +Q + E LFS M + +P+ TF ++
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
GA + +LE G ++H ++ G +V V N L+ MY KCGS AR++F+ M +V+
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL-YRI 501
SW+S+I YAQ G +EAL LF+RM V P+ V+ L AC+ +G ++EG ++ +R+
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
++ + + + + ++ + AR G + +A N+M D +++A+ HG
Sbjct: 358 VEAN---LASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSC-NAMIAAFTQHGR 411
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 190/412 (46%), Gaps = 69/412 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A + C+S+ L GR +H IL+SK D VL + +LNMY KC + +AR VF+ M
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 192
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLG 200
RNV S+TAMI+ Q G+ A+EL+ +M + + P+ +TF +I+ A GL + G
Sbjct: 193 KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 252
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R++H H+ ++++ QNAL+ MY K ++A VF S+ +++ SW SM
Sbjct: 253 RKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSM------- 305
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
IA A N EA++LF M ++ P G++ S L AC
Sbjct: 306 ---------------------IAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNAC 341
Query: 321 TSPLSLYQGMQIHSYIIKKGFYS------------------------------NVPVCNA 350
+L +G +IH +++ S + CNA
Sbjct: 342 ALLGALDEGREIHHRVVEANLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNA 401
Query: 351 IL----QH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL-EMGTQLHCYIMKT 404
++ QH + + R++ M D ITF V+ AC+ + + + L +M
Sbjct: 402 MIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDH 461
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFG 455
G+ V ++D+ + G LG A EL M D V+W +L+ G + G
Sbjct: 462 GVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHG 513
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 176/397 (44%), Gaps = 38/397 (9%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S+ + + EAL F + T+A ++ A L +L+ GRKVH H+ S
Sbjct: 203 MISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASR 262
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ V+ N ++ MYGKCGS +AR VFD M RNV+SWT+MIA +Q+G A+ L+
Sbjct: 263 GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLF 322
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M + P +F S + AC+ L + GR++H V+++ S + + +L++MY +
Sbjct: 323 KRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQM-ETSLLSMYARC 378
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ DA VF N M++ + S N +IA
Sbjct: 379 GSLDDARRVF----------------------------NRMKTRDAFSCNAMIAAFTQHG 410
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ--IHSYIIKKGFYSNVP- 346
+A+ ++ +M + DG+T S+L AC S SL + + S ++ G V
Sbjct: 411 RKKQALRIYRKMEQEGIPADGITFVSVLVAC-SHTSLVADCRDFLQSLVMDHGVVPLVEH 469
Query: 347 -VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+C + ++G L L+ + D + + ++ C L+ G + + +
Sbjct: 470 YLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELA 529
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A + L +MY AR + ME+ V
Sbjct: 530 PA-ETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVT 565
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 299/578 (51%), Gaps = 70/578 (12%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P ++S C+ S LG + H IL + + + +++MY KCG + AR++FD
Sbjct: 69 PYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFD 128
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+MPQR VV+W ++I G AIEL+++ML++ + F+ S + CS L +
Sbjct: 129 QMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREV 188
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+H ++K+ G +++ +L+ MY+K +
Sbjct: 189 GTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDV--------------------------- 221
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
D +R VF+ M + N+ +W +++ G + +EAM+L EM ++L P+ +T SLL +
Sbjct: 222 -DDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSS 280
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNV---------------------PVCNAIL------ 352
+ P L +Q+H II+ G SNV VC+ ++
Sbjct: 281 FSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIA 340
Query: 353 ------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+H+ E R F M + D T V+GA + LE G +H
Sbjct: 341 WNAVIAGYSKLGRHE--EALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHAL 398
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
I +TG + V NGL+ MY +CG++G ++ +F FME+ DV+SW++L+ +A G G EA
Sbjct: 399 IHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREA 458
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR-ERRSCVV 519
++LF +MR + ++PN T + VL ACSHVG V++G++ + M+++ + P + E + +V
Sbjct: 459 VELFEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLV 518
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
D RAG ++EAE FIN M V+K+LL++ HGN ++ R+A+ +L++ P + A
Sbjct: 519 DTFGRAGYLNEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKLLELWPNDPA 578
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
VLL ++ G W++ A L M +RG+RK PG SW
Sbjct: 579 TYVLLSSVLTVDGNWDDAADLRKLMCDRGLRKKPGYSW 616
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 200/471 (42%), Gaps = 75/471 (15%)
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
+QN +L + + G + + + I+ C+ LG Q H+ ++K S++
Sbjct: 45 NQNTSSPVDSDLIAEFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNV 104
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+A++ MY K I A +F + ++ + +W S+I G+ ++ +
Sbjct: 105 YICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKI----------- 153
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
A+ LF +M + +V S L C+ + G Q+H I
Sbjct: 154 -----------------AIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLI 196
Query: 337 IKKGFYSNVPVCNAILQ------------------------------------HQAGELF 360
+K G NV V +++ + E
Sbjct: 197 LKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAM 256
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
L M+ +P+ +T+N ++ + + L Q+HC I++ GL +V++ L+ +Y
Sbjct: 257 ALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVY 316
Query: 421 VKC-GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
KC SL +++ + + D ++W+++I GY++ G EEAL+ F M+ +G+ + TL
Sbjct: 317 SKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTL 376
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
V+ A + +EEG ++ ++ G I ++ +V + AR G + +++ M
Sbjct: 377 TSVVGAIGNSSFLEEGKAMHALIHRT-GYISHLNVQNGLVSMYARCGAIGDSKRVFWFME 435
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAE-----NILKIDPTNSAALVLLC 585
+ D++ W +LL + HG G+ A E +I P +S L +LC
Sbjct: 436 -EHDVISWNALLTAFAHHG---YGREAVELFEQMRKTEIKPNSSTFLAVLC 482
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 141/307 (45%), Gaps = 39/307 (12%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEA--LVAFDFLQNNTNFR 77
D + C +D + V D + R W + + + +EA LV LQ+
Sbjct: 213 DMYSKCGDVDDSRLVFDHMVNRNVITWT-SMVTGYSQIEKPDEAMALVKEMVLQD----- 266
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC-GSLEDA 134
+RP+ TY L+S+ S L +VH I+ + + + ++ +Y KC SLED
Sbjct: 267 LRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDF 326
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+ V + + ++W A+IAG S+ G+ A+ + +M Q+G+ D +T S++ A
Sbjct: 327 KKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNS 386
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+ +HA + ++ + SHL QN L++MY + I D+ VF + D+ SW +++
Sbjct: 387 SFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALL 446
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
F+ + R EA+ LF +M E+ P+ T
Sbjct: 447 TAFAHHGYGR----------------------------EAVELFEQMRKTEIKPNSSTFL 478
Query: 315 SLLCACT 321
++LCAC+
Sbjct: 479 AVLCACS 485
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 18/247 (7%)
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFR--------LFSLMLA 368
LC+ SPL + + ++++ + S+ N +H + F + S ++A
Sbjct: 3 LCSSASPLRKLKVSKSANHLLSRALTSH----NHHEEHSSSRTFNSNQNTSSPVDSDLIA 58
Query: 369 SQTKPDHIT----FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
T+ ++ N ++ CA S +G Q H I+K G +V++ + ++DMY KCG
Sbjct: 59 EFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCG 118
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+ SAR LF+ M VV+W+SLI GY C + A++LF +M + + + ++ L
Sbjct: 119 EISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLA 178
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
CS + E G Q++ ++ + G+ + +VD+ ++ G V ++ + M + ++
Sbjct: 179 GCSQLEAREVGTQVHGLIL-KTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMV-NRNV 236
Query: 545 VVWKSLL 551
+ W S++
Sbjct: 237 ITWTSMV 243
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 315/595 (52%), Gaps = 76/595 (12%)
Query: 78 IRPSTYADLISACSSLRSLQLGRK----VHDHILSSKCQPDAV-LHNHILNMYGKCGSLE 132
I +Y L+SA S L+ GR+ VH H++ + + V + N ++NMY K G++
Sbjct: 853 INSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIA 912
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
DA VF+ M +++ VSW ++I+G QN A E +++M ++G MP FT S + +C+
Sbjct: 913 DACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCA 972
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L + LG Q+H +K + + NAL+A+Y + + VFS + D
Sbjct: 973 SLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD------ 1026
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA-SCSNANEAMSLFSEMGDRELIPDGL 311
SWN++I ++ S ++ ++A+ F EM +
Sbjct: 1027 ----------------------QVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRV 1064
Query: 312 TVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFS- 364
T ++L A +S LSL++ QIH+ ++K + + NA+L + E ++F+
Sbjct: 1065 TFINILSAVSS-LSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFAR 1123
Query: 365 -------------------------------LMLASQTKPDHITFNDVMGACAAMASLEM 393
M+ + D TF V+ ACA++A+LE
Sbjct: 1124 MSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLER 1183
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++H ++ + DV V + L+DMY KCG + A F M +V SW+S+I GYA+
Sbjct: 1184 GMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYAR 1243
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVT-LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G GE+ALKLF RM G P+HV L+GVL+ACSHVG VEEG + ++ M Y + P
Sbjct: 1244 HGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRV 1303
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL-ASCKTHG-NVDVGKRAAENI 570
E SC+VDLL RAG++ E DFIN M ++++W+++L A C+ +G N ++G+RAAE +
Sbjct: 1304 EHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEML 1363
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L+++P N+ VLL N+YAS KWE+VA+ +MKE V+K G SW+ ++ +H
Sbjct: 1364 LELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVH 1418
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/605 (22%), Positives = 256/605 (42%), Gaps = 128/605 (21%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
NT T+ LI+ + R++H + + L N ++N+Y + G L
Sbjct: 537 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 596
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC- 191
A+ +FDEM RN+V+W +I+G +QNG+ + A + M+++G +P+ + FGS +RAC
Sbjct: 597 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 656
Query: 192 -SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY-----------TKFDRI------- 232
SG LG Q+H + K+ +GS ++ N LI+MY + FDRI
Sbjct: 657 ESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSIS 716
Query: 233 --------------LDAWNVFSSIAR---------------------------------- 244
+ A+++FSS+ +
Sbjct: 717 WNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQ 776
Query: 245 -----------KDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSN 290
+D+ +++ GF++ D A+ +F +M N+ S N ++ G+
Sbjct: 777 MLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ 836
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-----GMQIHSYIIKKGFYSN- 344
A +F EM D L+ +L + S S+ + G ++H+++I+ G N
Sbjct: 837 GEAAAKVFHEMKD--LVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNK 894
Query: 345 VPVCNAILQHQAGE--------LFRL----------------------------FSLMLA 368
V + N ++ A +F L F M
Sbjct: 895 VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRR 954
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ + P + T + +CA++ + +G Q+HC +K GL DV V N L+ +Y + G
Sbjct: 955 TGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTE 1014
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCG-EEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F+ M + D VSW+S+I + +A+K F M G + VT + +L+A S
Sbjct: 1015 CLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVS 1074
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+ L E Q++ ++ +Y + + ++ + G ++E E +M+ D V W
Sbjct: 1075 SLSLHEVSHQIHALVL-KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSW 1133
Query: 548 KSLLA 552
S+++
Sbjct: 1134 NSMIS 1138
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 163/634 (25%), Positives = 277/634 (43%), Gaps = 119/634 (18%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
++ + RR D + +DLFSS+ K+ L F F N T+ LI+A S
Sbjct: 720 IISVYSRRGDXVSAYDLFSSMQKEGL------GFSFKPNEY-------TFGSLITAACS- 765
Query: 94 RSLQLGRKVHDHILS----SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
S+ G V + +L+ S D + + +++ + + G +DA+ +F++M RNVVS
Sbjct: 766 -SVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSM 824
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVG----LGRQLH 204
++ G + Q AA +++ +M G+ D + ++ A S + GR++H
Sbjct: 825 NGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVH 882
Query: 205 AHVIKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
AHVI++ + ++ N L+ MY K I DA +VF + KD SW
Sbjct: 883 AHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW------------- 929
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
N++I+G+ + +A F M +P T+ S L +C S
Sbjct: 930 ---------------NSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASL 974
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHITF 378
+ G QIH +K G ++V V NA+L A E ++FSLM + D +++
Sbjct: 975 GWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM----PEYDQVSW 1030
Query: 379 NDVMGACA---------------------------------AMASL---EMGTQLHCYIM 402
N V+GA + A++SL E+ Q+H ++
Sbjct: 1031 NSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVL 1090
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEAL 461
K L+ D + N L+ Y KCG + ++F M E D VSW+S+I GY +A+
Sbjct: 1091 KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAM 1150
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR----SC 517
L M G R + T VL+AC+ V +E G++++ GI E S
Sbjct: 1151 DLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHAC-----GIRACMESDVVVGSA 1205
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI---- 573
+VD+ ++ GR+ A F M ++ W S+++ HG+ G++A + ++
Sbjct: 1206 LVDMYSKCGRIDYASRFFELMPL-RNVYSWNSMISGYARHGH---GEKALKLFTRMMLDG 1261
Query: 574 -DPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
P + A L+ + + + G EE SM E
Sbjct: 1262 QPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSE 1295
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 333/692 (48%), Gaps = 135/692 (19%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISA---------------CSSLRSLQLGRKVHD 104
YN L FDF +NN + R + DL S+ C L +GR+VH
Sbjct: 72 YNRLL--FDFSRNNHD-REALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHC 128
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
L S D + +++MY K ED R +FDEM +NVVSWT++++G ++NG +
Sbjct: 129 QSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDE 188
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
I L QM G+ P+ FTF +++ A + + G Q+HA ++K+ NALI
Sbjct: 189 VIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALIC 248
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF------------------ARTV 266
MY K + + DA VF S+ +D +W MI G++ + F +RTV
Sbjct: 249 MYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTV 308
Query: 267 F-------NEMESPNLASW-----------------NTIIAGVASCSNANEAMSLFS--- 299
F ++ N ++ + CS+ +EA LFS
Sbjct: 309 FCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMAD 368
Query: 300 -----------------------------EMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+M + P+ T ++L P SL
Sbjct: 369 AAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG--KPSSLLS-- 424
Query: 331 QIHSYIIKKGFYSNVP-VCNAILQH--------QAGELF--------------------- 360
Q+H+ II K +Y VP V A+L ++ +F
Sbjct: 425 QLHAQII-KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQT 483
Query: 361 -------RLFSLMLASQTKPDHITFNDVMGAC-AAMASLEMGTQLHCYIMKTGLALDVFV 412
+F ++ KP+ TF+ V+ AC ++ A++E G Q+H +K+G + + V
Sbjct: 484 RDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCV 543
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
+ L+ MY K G++ SA ++F E+ D+VSW+S+I GY Q G ++AL++F+ M++ G+
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGL 603
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+ VT +GVLTAC+H GLVEEG + + IM +Y I E SC+VDL +RAG +A
Sbjct: 604 PLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAM 663
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
D IN M F +W++LLA+C+ H N+++GK AAE ++ + P ++ VLL NI+A +G
Sbjct: 664 DIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAG 723
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
WEE A + M ER V+K G SWIEI+ +I
Sbjct: 724 NWEEKAHVRKLMDERKVKKEAGCSWIEIKNRI 755
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 206/508 (40%), Gaps = 80/508 (15%)
Query: 91 SSLRSLQLGRKV---------HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
SSLR+LQ K+ H + P L++ L A +FDE
Sbjct: 5 SSLRTLQNKAKITVGNGRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDET 64
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P +++ + ++ S+N + A+ L+ + SGL D T ++ C L +GR
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGR 124
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +KS + +L+ MY K + D +F + K++ SW S++ G
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSG----- 179
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+AR N+ E + L ++M + P+G T ++L A
Sbjct: 180 YARNGLND-----------------------EVIHLINQMQMEGVNPNGFTFATVLGALA 216
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAG------------------- 357
+ G+Q+H+ I+K GF VCNA++ G
Sbjct: 217 DESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNI 276
Query: 358 ------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E F++F M + K F + C+ L QLHC ++K G
Sbjct: 277 MIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNG 336
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLF 464
+ LM Y KC S+ A +LF+ + +VV+W+++I G+ Q E+A+ LF
Sbjct: 337 YEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLF 396
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M GVRPNH T VL L + Q I++ Y +P+ + ++D +
Sbjct: 397 CQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQ---IIKAYYEKVPSVA--TALLDAYVK 451
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G V E+ + DIV W ++L
Sbjct: 452 TGNVVESARVFYSIP-AKDIVAWSAMLT 478
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 195/458 (42%), Gaps = 49/458 (10%)
Query: 24 LCMLLDQ-----AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRI 78
+CM L A V DS + R W+ + Y E F ++ ++
Sbjct: 247 ICMYLKSEMVGDAEAVFDSMVVRDSVTWNI-MIGGYAAIGFYLEGFQMFHRMRL-AGVKL 304
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ + + CS R L +++H ++ + + + ++ Y KC S+++A +F
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF 364
Query: 139 DEM-PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
NVV+WTAMI G QN A++L+ QM + G+ P+ FT+ +++
Sbjct: 365 SMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPS---- 420
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
L QLHA +IK+ + AL+ Y K ++++ VF SI KDI +W +M
Sbjct: 421 SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAM---- 476
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+ G+A ++ +AM +F ++ + P+ T S++
Sbjct: 477 ------------------------LTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVI 512
Query: 318 CAC-TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQTKPD 374
AC +S ++ G QIH+ +K G + + V +A+L + G + + Q + D
Sbjct: 513 NACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNI-ESAEKVFTRQEERD 571
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+++N ++ + ++ + GL LD G++ G + + FN
Sbjct: 572 IVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFN 631
Query: 435 FM-----EDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
M D + +S ++ Y++ G ++A+ + M
Sbjct: 632 IMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGM 669
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 146/339 (43%), Gaps = 39/339 (11%)
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
S+ +A +F+E +++ +N ++ + ++ EA+ LF ++ L DGLT+ L
Sbjct: 52 SRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCAL 111
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------HQAG----- 357
C G Q+H +K GF +V V +++ + G
Sbjct: 112 KVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVV 171
Query: 358 ----------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
E+ L + M P+ TF V+GA A + +E G Q+H I
Sbjct: 172 SWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMI 231
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K G FV N L+ MY+K +G A +F+ M D V+W+ +I GYA G E
Sbjct: 232 VKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGF 291
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVD 520
++F RMR +GV+ + L CS + QL+ +++N Y ++ R+ ++
Sbjct: 292 QMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF--AQDIRTALMV 349
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
++ V EA + ++V W +++ + N
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNN 388
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 309/609 (50%), Gaps = 81/609 (13%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D ++ FR+ P+ T+ ++ ACS+L L+ GR +H H ++ D + +++
Sbjct: 84 AIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALID 143
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQF 182
+Y +C AR VF +MP R+VV+W AM+AG + +G + AI + M GL P+
Sbjct: 144 LYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS 203
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKS---EHGSHLISQNALIAMYTKFDRILDAWNVF 239
T S++ + + G +HA+ +++ ++ ++ AL+ MY K +++
Sbjct: 204 TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV------ 257
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+A VF+ M N +W+ +I G C EA +LF
Sbjct: 258 ----------------------YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFK 295
Query: 300 EMGDRELIPDGL------TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL- 352
+M + +GL +V S L C S L+ G Q+H+ I K G ++++ N++L
Sbjct: 296 DM-----LVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLS 350
Query: 353 -----------------------------------QHQAGELFRLFSLMLASQTKPDHIT 377
+A E F +F M A +PD T
Sbjct: 351 MYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIAT 410
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
++ AC+ +A+L+ G H ++ GLAL+ + N L+DMY KCG + +R++F+ M
Sbjct: 411 MVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP 470
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DVVSW+++I GY G G+EA LF M++ G P+ VT + ++ ACSH GLV EG
Sbjct: 471 ARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH 530
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ M ++YGI+P E C+VDLLAR G + EA FI M D+ VW +LL +C+ H
Sbjct: 531 WFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH 590
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N+D+GK+ + I K+ P + VLL NI++++G+++E A + K +G +K PG SW
Sbjct: 591 KNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSW 650
Query: 618 IEIQTKIHA 626
IEI +HA
Sbjct: 651 IEINGSLHA 659
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 219/485 (45%), Gaps = 86/485 (17%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G L AR VFD +P + ++ A+I S G +AAI+LY ML+ + P+++TF ++
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+ACS L + GR +HAH + + L ALI +Y + R A NVF+ + +D+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-ELI 307
+W N ++AG A+ + A++ +M D L
Sbjct: 168 AW----------------------------NAMLAGYANHGMYHHAIAHLLDMQDHGGLR 199
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN----------------------- 344
P+ T+ SLL +L+QG IH+Y ++ N
Sbjct: 200 PNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYA 259
Query: 345 ------VPVCNA----------ILQHQAGELFRLFSLMLASQT-KPDHITFNDVMGACAA 387
+PV N +L + E F LF ML + + CA+
Sbjct: 260 CRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCAS 319
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+A L MGTQLH I K+G+ D+ N L+ MY K G + A F+ + D +S+ +L
Sbjct: 320 LADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGAL 379
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
+ G Q G EEA +F++M++ + P+ T+V ++ ACSH+ ++ G + +G
Sbjct: 380 LSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG-------KCSHG 432
Query: 508 IIPTR----ERRSC--VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ R E C ++D+ A+ G++ + ++M D+V W +++A HG
Sbjct: 433 SVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP-ARDVVSWNTMIAGYGIHG--- 488
Query: 562 VGKRA 566
+GK A
Sbjct: 489 LGKEA 493
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 157/361 (43%), Gaps = 46/361 (12%)
Query: 245 KDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
KD W ++ +L AR VF+ + +P+ ++N +I + + A+ L+ M
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQA 356
+ P+ T +L AC++ + L G IH++ G ++++ V A++ +
Sbjct: 92 LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151
Query: 357 GELFRLFS-----------LMLASQT---------------------KPDHITFNDVMGA 384
G +F+ MLA +P+ T ++
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211
Query: 385 CAAMASLEMGTQLHCYIMKTGLALD---VFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
A +L GT +H Y ++ L + V + L+DMY KC L A +F+ M +
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGV-RPNHVTLVGVLTACSHVGLVEEGLQLYR 500
V+WS+LI G+ EA LF+ M G+ + ++ L C+ + + G QL+
Sbjct: 272 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHA 331
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
++ GI + ++ + A+AG ++EA F +++A D I + +LL+ C +G
Sbjct: 332 LIAKS-GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI-SYGALLSGCVQNGKA 389
Query: 561 D 561
+
Sbjct: 390 E 390
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 296/601 (49%), Gaps = 73/601 (12%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS--KCQPDAVLHNHILNMYGKCGSL 131
TN + YA L AC+ + ++ G +H +IL+ K Q D L N++LNMY KCG L
Sbjct: 72 TNPSLTLQDYAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHL 131
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ AR +FD+MP+RN VSWT +++G +Q G L+ ML + P++F F S++ AC
Sbjct: 132 DYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGML-ACFRPNEFAFASVLCAC 190
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
V G Q+HA +K + NALI MY+K +G
Sbjct: 191 EEQD-VKYGLQVHAAALKMSLDFSVYVANALITMYSKCS-----------------GGFG 232
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM---GDRELIP 308
D D A VF ME NL SWN++I+G ++A+ LF+ M G R
Sbjct: 233 GSCD--QTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNST 290
Query: 309 DGLTVRSLLCACTSPLS-------LYQGMQIHSYIIKKGFYSNVPVCNAILQHQA---GE 358
L V S L C S L Q+H +K G S V V A+++ A G
Sbjct: 291 TLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGH 350
Query: 359 LFRLFSLMLASQTKPDHI----------------------------------TFNDVMGA 384
+ F L L + + D + TF+ + A
Sbjct: 351 ISDCFKLFLDTSGEHDIVSWTAIISVFAERDPEQAFLLFCQLHRENFVLDRHTFSIALKA 410
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA + + T++H +MK G D V N L+ Y + GSL + ++F M D+VSW
Sbjct: 411 CAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSW 470
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+S++ YA G ++AL LF++M V P+ T V +L ACSH GLVEEG Q++ M
Sbjct: 471 NSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTE 527
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+GI P + SC+VDL RAG++ EAE+ I +M D V+W SLL SC+ HG D+ K
Sbjct: 528 SHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAK 587
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
AA+ +DP NS A + + NIY+S G + E + M++ VRK PG SW+E+ ++
Sbjct: 588 LAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQV 647
Query: 625 H 625
H
Sbjct: 648 H 648
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/521 (32%), Positives = 289/521 (55%), Gaps = 36/521 (6%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++ Y K G + +AR VFD+MP+RNVVSWT+M+ G Q G + A L+ +M + ++
Sbjct: 82 NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVV 141
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
G +I V R+L + + +++ +I R+ +A +
Sbjct: 142 SWTVMLGGLIEDGR----VDEARRLFDMIPVKD----VVASTNMIGGLCSEGRLSEAREI 193
Query: 239 FSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + ++++ +W SMI G++ K+D AR +F M N +W ++ G NEA
Sbjct: 194 FDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAA 253
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI---------IKKGFYSNVP 346
LF M + + AC + G ++ + +K+
Sbjct: 254 ELFKAMPVKPV-----------AACNG---MIMGFGLNGEVGKARWVFDQMKEKDDGTWS 299
Query: 347 VCNAILQHQAGEL--FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
I + + EL LFSLM +P+ + ++ C ++ASL+ G Q+H ++++
Sbjct: 300 ALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRS 359
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
LD++V + L+ MY+KCG L + + +F+ D+V W+S+I GYAQ G GE+AL++F
Sbjct: 360 HFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVF 419
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M SSG P+ +T +GVL+AC + G V+EGL+++ M+++Y + E +C+VDLL R
Sbjct: 420 HEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGR 479
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG+++EA + I M + D +VW +LL++C+TH N+D+ + AA+ +L+++P+++ +LL
Sbjct: 480 AGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILL 539
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+YAS +W++VA L +M+ R V K PG SWIE+ K+H
Sbjct: 540 SNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVH 580
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 223/499 (44%), Gaps = 74/499 (14%)
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++ + + G ++ AR +FD++ + V SW A++AG N + A +L+ +M P++
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM------PER 76
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T IS N L++ Y K I +A VF
Sbjct: 77 NT---------------------------------ISWNGLVSGYVKNGMISEARKVFDK 103
Query: 242 IARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
+ +++ SW SM+ G+ + +D A +F M N+ SW ++ G+ +EA LF
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF 163
Query: 299 SEMGDRELIP--DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
++IP D + +++ S L + +I + ++ + + + +
Sbjct: 164 ------DMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNK 217
Query: 357 GELFR-LFSLMLASQTKPD--HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
++ R LF +M PD +T+ ++ + +L K V
Sbjct: 218 VDVARKLFEVM------PDKNEVTWTAMLKGYTRSGRINEAAEL----FKAMPVKPVAAC 267
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
NG++ + G +G AR +F+ M++ D +WS+LI Y + G EAL LF M+ GVR
Sbjct: 268 NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
PN +++ +L+ C + ++ G Q++ +++++ + + S ++ + + G + +
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVS--SVLITMYIKCGDLVTGK 385
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA----ALVLLCNIY 588
++ + DIV+W S++A HG G++A E ++ + +A + + +
Sbjct: 386 RVFDRFS-SKDIVMWNSIIAGYAQHG---FGEKALEVFHEMFSSGAAPDEITFIGVLSAC 441
Query: 589 ASSGKWEEVARLMGSMKER 607
+GK +E + SMK +
Sbjct: 442 GYTGKVKEGLEIFESMKSK 460
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
F L + +A V D + D W L ++ EAL F +Q +RP
Sbjct: 273 GFGLNGEVGKARWVFDQMKEKDDGTWS-ALIKIYERKGFELEALALFSLMQREG---VRP 328
Query: 81 S--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ + ++S C SL SL GR+VH ++ S D + + ++ MY KCG L + VF
Sbjct: 329 NFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVF 388
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D +++V W ++IAG +Q+G A+E++ +M SG PD+ TF ++ AC V
Sbjct: 389 DRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVK 448
Query: 199 LGRQLHAHVIKSEHGSHLISQNA-----LIAMYTKFDRILDAWNVFSSI-ARKDITSWGS 252
G + + +S + + Q ++ + + ++ +A N+ ++ D WG+
Sbjct: 449 EGLE----IFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGA 504
Query: 253 MI 254
++
Sbjct: 505 LL 506
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 146/357 (40%), Gaps = 72/357 (20%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
CS R L R++ D + Q + V +++ Y ++ AR +F+ MP +N V+W
Sbjct: 182 CSEGR-LSEAREIFDEM----PQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTW 236
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC-------VGLGRQ 202
TAM+ G +++G+ N A EL+ M + P + AC+G+ VG R
Sbjct: 237 TAMLKGYTRSGRINEAAELFKAM---PVKP--------VAACNGMIMGFGLNGEVGKARW 285
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK-------DITSWGSMID 255
+ + + + G + +ALI +Y + L+A +FS + R+ I S S+
Sbjct: 286 VFDQMKEKDDG----TWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCG 341
Query: 256 GFSKLDFART-----------------------------------VFNEMESPNLASWNT 280
+ LD R VF+ S ++ WN+
Sbjct: 342 SLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNS 401
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
IIAG A +A+ +F EM PD +T +L AC + +G++I + K
Sbjct: 402 IIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKY 461
Query: 341 FYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
C L +AG+L +L+ + D I + ++ AC +L++
Sbjct: 462 QVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLA 518
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
+ + G + AR +F+ ++ V SW++++ GY EA KLF +M N ++
Sbjct: 26 FARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER----NTISW 81
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
G+++ G++ E +++ M + T R V + G + EAE +M
Sbjct: 82 NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYV-----QEGLIDEAELLFWRMP 136
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVA 598
+ ++V W +L G VD +R + I D S ++ LC S G+ E
Sbjct: 137 -EKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLC----SEGRLSEAR 191
Query: 599 RLMGSMKERGV 609
+ M +R V
Sbjct: 192 EIFDEMPQRNV 202
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/624 (29%), Positives = 309/624 (49%), Gaps = 69/624 (11%)
Query: 40 RRFDDIWDFDLFSSLCKQNLY---NEALVAFDFLQNNTNFRIRPS--TYADLISACSSLR 94
R FD + D D N Y E+ A ++ + +P T+A ++S S
Sbjct: 66 RFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEA 125
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
++ GR++H ++ S ++ N ++ +Y K L DAR +FD MPQ ++V W MI
Sbjct: 126 MVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIG 185
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
G QNG + A L+ +M+ +G+ PD TF S + + + + +++H ++++
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
+ +ALI +Y K + A +F+ + DI + +MI G+ V N M
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGY--------VLNGMN--- 294
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
+A+ +F + +++IP+ LT S+L AC ++ G ++H
Sbjct: 295 -----------------KDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHG 337
Query: 335 YIIKKGFYSNVPVCNAILQHQAG------------------------------------E 358
YIIK PV +AI+ A E
Sbjct: 338 YIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEE 397
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
LF M K D +T + + ACA + +L G ++H +++K D+F M+ L++
Sbjct: 398 AIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALIN 457
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY KCG L AR +FN M++ + V+W+S+I Y G ++L LF M G++P+H+T
Sbjct: 458 MYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHIT 517
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ +L++C H G VE+G++ +R M EYGI E +C+ DL RAG + EA + I M
Sbjct: 518 FLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSM 577
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
F VW +LL +C+ HGNV++ + A+ +L ++P NS +LL ++ A +GKW V
Sbjct: 578 PFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVH 637
Query: 599 RLMGSMKERGVRKVPGQSWIEIQT 622
++ MKERGV+KVPG SWIE+
Sbjct: 638 KIQHLMKERGVQKVPGCSWIEVNN 661
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 264/572 (46%), Gaps = 71/572 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +I C+ L +++LG+ + D IL D + + ++ +Y G +EDAR FD+M
Sbjct: 12 TFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKM 71
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++ V W MI G Q G+ ++AI+L+ M+ S PD TF ++ V GR
Sbjct: 72 IDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGR 131
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH V++S + N L+ +Y+K ++ DA +F + + D+ W MI G+ +
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNG 191
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F ++A LF+EM + PD +T S L +
Sbjct: 192 F----------------------------MDDASMLFNEMISAGIKPDSITFTSFLPSLA 223
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNA------------------------------- 350
SL Q +IH YI++ G +V + +A
Sbjct: 224 ESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTA 283
Query: 351 -----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L + +F +L + P+ +TF+ ++ ACA +A++++G +LH YI+K
Sbjct: 284 MISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNE 343
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L V + +M+MY KCG L A +F + D + W+S+I ++Q G EEA+ LFR
Sbjct: 344 LEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFR 403
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M GV+ + VT+ L+AC+++ + G +++ M S ++++ A+
Sbjct: 404 QMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKC 462
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVL 583
G+++ A N M + + V W S++A+ HG + N+L+ I P + L +
Sbjct: 463 GKLNIARLVFNLMQ-EKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTI 521
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
L + +G+ E+ R M E +P Q
Sbjct: 522 LSSC-GHAGQVEDGVRYFRCMTEE--YGIPAQ 550
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 192/426 (45%), Gaps = 70/426 (16%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
ML G+ PD++TF +I+ C+GL V LG+ + +++ + ++LI +Y
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
I DA F + KD W MI+G+ + C +
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQ----------------------------CGES 92
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
+ A+ LF +M E PD +T +L S + G Q+H +++ G VP+
Sbjct: 93 DSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGL-DFVPLVGNT 151
Query: 352 L------QHQAGELFRLFSL-------------------------------MLASQTKPD 374
L Q G+ +LF + M+++ KPD
Sbjct: 152 LVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPD 211
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
ITF + + A +SL+ ++H YI++ G+ LDV++ + L+D+Y KC A ++FN
Sbjct: 212 SITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFN 271
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
D+V ++++I GY G ++AL++FR + + PN +T +L AC+ + ++
Sbjct: 272 LSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKL 331
Query: 495 GLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
G +L+ I++NE + S ++++ A+ GR+ A +++ D I W S++ S
Sbjct: 332 GRELHGYIIKNE--LEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAI-CWNSIITS 388
Query: 554 CKTHGN 559
G
Sbjct: 389 FSQDGK 394
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 7/247 (2%)
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
ML PD TF V+ C + ++ +G + I++ G LD+FV + L+ +Y G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ AR F+ M D D V W+ +I GY Q G + A+KLF+ M SS +P+ VT VL+
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 486 CSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
+VE G QL+ ++++ +P + +V + ++ ++ +A + M D+
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPL--VGNTLVTVYSKGRQLGDARKLFDMMP-QIDL 177
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYASSGKWEEVARLMG 602
VVW ++ +G +D ++ I P + L ++ A S +++ + G
Sbjct: 178 VVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSL-AESSSLKQIKEIHG 236
Query: 603 SMKERGV 609
+ GV
Sbjct: 237 YIVRHGV 243
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 206/726 (28%), Positives = 341/726 (46%), Gaps = 117/726 (16%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C + +C D + V D+ + W+ + SS + LY+E L F + + T
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWN-AVISSYSRNELYDEVLETFIEMISTT 181
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+ TY +I AC+ + + +G VH ++ + D + N +++ YG G + DA
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS----GLMPDQFTFGSIIRA 190
+FD MP+RN+VSW +MI S NG + L +M++ MPD T +++
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ +GLG+ +H +K L+ NAL+ MY+K I +A +F K++ SW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 251 GSMIDGFSK----------------------------LDFARTVFNEMESPNLASW---- 278
+M+ GFS L+ F+E P+L
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 279 ------------NTIIAGVASCSNANEAMSLFS--------------------------- 299
N +A A C + + A +F
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSL 481
Query: 300 ----EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH- 354
+M L+PD TV SLL AC+ SL G ++H +II+ ++ V ++L
Sbjct: 482 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 541
Query: 355 -QAGELFRLFSLMLASQTK-----------------PDH-----------------ITFN 379
GEL + +L A + K PD I+
Sbjct: 542 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 601
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V GAC+ + SL +G + H Y +K L D F+ L+DMY K GS+ + ++FN +++
Sbjct: 602 PVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 661
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
SW+++I+GY G +EA+KLF M+ +G P+ +T +GVLTAC+H GL+ EGL+
Sbjct: 662 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI-NQMAFDDDIVVWKSLLASCKTHG 558
M++ +G+ P + +CV+D+L RAG++ +A + +M+ + D+ +WKSLL+SC+ H
Sbjct: 722 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 781
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N+++G++ A + +++P VLL N+YA GKWE+V ++ M E +RK G SWI
Sbjct: 782 NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Query: 619 EIQTKI 624
E+ K+
Sbjct: 842 ELNRKV 847
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 229/520 (44%), Gaps = 74/520 (14%)
Query: 86 LISACSSLRSLQLGRKVHDHIL-SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
L+ A + +++GRK+H + S++ + D VL I+ MY CGS +D+R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQL 203
N+ W A+I+ S+N + +E +++M+ + L+PD FT+ +I+AC+G+ VG+G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H V+K+ + NAL++ Y + DA +F + +++ SW SMI FS F+
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
F ++ G + E GD +PD T+ ++L C
Sbjct: 270 EESF-------------LLLG-----------EMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------- 352
+ G +H + +K + + NA++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 353 -----QHQAGELFRLFSLMLA--SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ F + MLA K D +T + + C + L +LHCY +K
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ V N + Y KCGSL A+ +F+ + V SW++LI G+AQ +L
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ SG+ P+ T+ +L+ACS + + G +++ II R V L +
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF------IIRNWLERDLFVYLSVLS 539
Query: 526 GRVHEAEDFINQMAF----DDDIVVWKSLLASCKTHGNVD 561
+H E Q F D +V W +++ +G D
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 579
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 295/586 (50%), Gaps = 71/586 (12%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A ++ACS +L G+ +H IL VL N +++MY KCG ++ AR++FD +
Sbjct: 71 AGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDK 130
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC--CVGLGR 201
+ VSW ++IAG QNG+ + + +M Q+GL + +T GS ++ACS C G
Sbjct: 131 LDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGT 190
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH H IK ++ AL+ MY K GS LD
Sbjct: 191 MLHDHAIKLGLHLDVVVGTALLDMYAK---------------------TGS-------LD 222
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSN-----ANEAMSLFSEMGDRELIPDGLTVRSL 316
A +F++M N+ +N ++AG+ A +A++LF EM + P T SL
Sbjct: 223 DAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSL 282
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSN-------------------------------- 344
L AC Q+H+ + K G S+
Sbjct: 283 LKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTI 342
Query: 345 VPVCNAILQH-QAGEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
VP+ I + Q GE LF +L + KPD F+ +M +CA M L G Q+ +
Sbjct: 343 VPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGH 402
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
K G++ N + MY K G L +A F ME+PD+VSWS++I AQ G EA
Sbjct: 403 ATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEA 462
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L+ F M+S G+ PNH +GVL ACSH GLVEEGL+ + M+ +Y + + CVVD
Sbjct: 463 LRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVD 522
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL RAGR+ +AE I ++ F+ + V+W++LL++C+ H + +R A+ +++++P SA+
Sbjct: 523 LLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASAS 582
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIY +G +++ M+ER ++K PG SWI+I K+++
Sbjct: 583 YVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYS 628
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 235/499 (47%), Gaps = 24/499 (4%)
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
KCG A +FD+M + N+V++ ++I+G Q + + L+ + + GL D++
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+ ACS + G+ +H ++ GS ++ N+LI MY+K ++ A +F + D
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 247 ITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVA--SCSNANEAMSLFSEM 301
SW S+I G+ K + T+ +M LA +NT G A +CS+ +F M
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA-FNTYTLGSALKACSSNFNGCKMFGTM 191
Query: 302 GDRELIPDGLTV-----RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ- 355
I GL + +LL SL +QI ++ K + +LQ +
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQET 251
Query: 356 -----AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
A + LF M + KP T++ ++ AC + + Q+H + K GL D
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 311
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
++ + L+D+Y GS+ A FN + + +V +++I GY Q G E AL LF + +
Sbjct: 312 YIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTY 371
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
+P+ ++++C+++G++ G Q+ + + GI ++ + + A++G ++
Sbjct: 372 EEKPDEFIFSTIMSSCANMGMLRSGEQI-QGHATKVGISRFTIFQNSQIWMYAKSGDLYA 430
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK---IDPTNSAALVLLCNI 587
A QM + DIV W +++ S HG+ R E ++K I+P + A L +L
Sbjct: 431 ANLTFQQME-NPDIVSWSTMICSNAQHGHAMEALRFFE-LMKSCGIEPNHFAFLGVLIAC 488
Query: 588 YASSGKWEEVARLMGSMKE 606
+ G EE R +M++
Sbjct: 489 -SHRGLVEEGLRYFDTMEK 506
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 319/655 (48%), Gaps = 112/655 (17%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST+A ++SA ++ + GR+VH + + + + ++N+Y KCG + DA +VFD
Sbjct: 201 STFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDC 260
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
++NVV W AM+ G +N + AI++++ M + GL D+FT+ S++ AC+ L LG
Sbjct: 261 SGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLG 320
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
RQ+ IK+ + L NA + M++KF I DA +F+ I KD SW +++ G +
Sbjct: 321 RQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHN 380
Query: 261 DFARTVFNEME-------SPNLASWNTIIAGVAS-------------------CSNANEA 294
+ + ++ +P+ S+ T+I ++ CSN
Sbjct: 381 EEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVG 440
Query: 295 MSL---FSEMGDRE--------------------------------------------LI 307
SL +S+ GD E L
Sbjct: 441 SSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLK 500
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------------------- 341
P T S+L CT LS G Q+H Y +K GF
Sbjct: 501 PSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANK 560
Query: 342 -------YSNVPVCNAILQHQAGELFRLFSL-----MLASQTKPDHITFNDVMGACAAMA 389
+ N+ AI+ A + SL M + PD +TF ++ AC+ M
Sbjct: 561 LLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMT 620
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLI 448
+L G ++H I+K+G + ++DMY KCG + S+ E F ++ D+ W+S+I
Sbjct: 621 ALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
+G+A+ G +EAL LF++M+ S ++ + VT +GVL AC+H GL+ EG + M YGI
Sbjct: 681 LGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGI 740
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
+P + +C +DLL R G + EA++ IN++ F D V+W + LA+C+ H + + G+ AA+
Sbjct: 741 MPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAK 800
Query: 569 NILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+++++P NS+ VLL N+YA++G W E +M+E+G K PG SWI + K
Sbjct: 801 ELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNK 855
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/513 (23%), Positives = 214/513 (41%), Gaps = 104/513 (20%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP + A +SACS L +L G++ H A ++NMY +CG + DAR
Sbjct: 27 VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VF + + V W +MI+G + G+ A+ L+ +M + G PD+ T
Sbjct: 87 RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVT------------ 134
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI-ARKDITSWGSMI 254
CV A++ T R+ DA + + A +W ++I
Sbjct: 135 CV-----------------------AVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVI 171
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
G+++ +G+ +E L+ +M L P T
Sbjct: 172 SGYAQQ----------------------SGI-----EHEVFGLYKDMRCWGLWPTRSTFA 204
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----------------- 357
S+L A + + +G Q+H+ ++ G +NV V ++++ A
Sbjct: 205 SMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEK 264
Query: 358 -------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
E ++F M + D T+ V+GACA + S +G Q+
Sbjct: 265 NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQ 324
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
C +K + +FV N +DM+ K G++ A+ LFN + D VSW++L+VG E
Sbjct: 325 CVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDE 384
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA+ + + M GV P+ V+ V+ ACS++ E G Q++ + ++ I S +
Sbjct: 385 EAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIH-CLAMKHSICSNHAVGSSL 443
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+D ++ G V + Q+ D +V +++L
Sbjct: 444 IDFYSKHGDVESCRKVLAQV--DASSIVPRNVL 474
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 175/413 (42%), Gaps = 66/413 (15%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-RNVVSWTAMIAG-CSQNGQENAAIELYV 170
PD V ++ G LEDAR + MP + V+W A+I+G Q+G E+ LY
Sbjct: 130 PDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYK 189
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M GL P + TF S++ A + GRQ+HA ++ +++ ++LI +Y K
Sbjct: 190 DMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCG 249
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
I DA VF K++ W +M++G V NE +
Sbjct: 250 CIGDAILVFDCSGEKNVVMWNAMLNGL--------VRNEYQV------------------ 283
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
EA+ +F M L D T S+L AC S G Q+ IK +++ V NA
Sbjct: 284 --EAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANA 341
Query: 351 ILQ--------HQAGELFRLFSL----------------------------MLASQTKPD 374
L A LF L + M PD
Sbjct: 342 TLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPD 401
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
++F V+ AC+ + + E G Q+HC MK + + V + L+D Y K G + S R++
Sbjct: 402 EVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLA 461
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++ +V + LI G Q +EA+ LF+++ G++P+ T +L+ C+
Sbjct: 462 QVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT 514
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 176/392 (44%), Gaps = 40/392 (10%)
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ PDQF + + ACS L + G+Q H K GS AL+ MY + R+ DA
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
R VF + P+ W ++I+G EA+
Sbjct: 86 ----------------------------RRVFGGISLPDTVCWASMISGYHRAGRFQEAV 117
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
LF+ M PD +T +++CA T+ L + + + S+ NA++
Sbjct: 118 CLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDA---RTLLHRMPAPSSTVAWNAVISGY 174
Query: 354 -HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
Q+G E+F L+ M P TF ++ A A + G Q+H ++ GL +
Sbjct: 175 AQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDAN 234
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
VFV + L+++Y KCG +G A +F+ + +VV W++++ G + EA+++F M+
Sbjct: 235 VFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKR 294
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
G+ + T V VL AC+H+ G Q+ + + + + + + +D+ ++ G +
Sbjct: 295 LGLEADEFTYVSVLGACAHLDSHCLGRQV-QCVTIKNCMDASLFVANATLDMHSKFGAID 353
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+A+ N + + D V W +LL TH D
Sbjct: 354 DAKTLFNLITY-KDTVSWNALLVGL-THNEED 383
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 320/643 (49%), Gaps = 70/643 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C L+ A ++ D + D + + S+ EAL F +Q + + P+
Sbjct: 261 YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS---LAPN 317
Query: 82 TYADL--ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
TY + + AC ++ G +H +L S + + N ++ MY + G + +A +F
Sbjct: 318 TYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFY 377
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M + +SW +M++G QNG + A++ Y +M +G PD SII A +
Sbjct: 378 NMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLN 437
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+HA+ +K+ S L N+L+ MY KF
Sbjct: 438 GMQIHAYAMKNGLDSDLQVGNSLVDMYAKF----------------------------CS 469
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ + +F++M ++ SW TIIAG A + + A+ LF E+ + D + + S+L A
Sbjct: 470 MKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLA 529
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------------- 353
C+ + +IHSYII+KG S++ + N I+
Sbjct: 530 CSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSW 588
Query: 354 --------HQ--AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
H A E LF LM + +PD I+ ++ A A++++L+ G ++H ++++
Sbjct: 589 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 648
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G L+ + + L+DMY +CG+L +R +FNF+ + D+V W+S+I Y GCG A+ L
Sbjct: 649 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 708
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
FRRM + P+H+ V VL ACSH GL+ EG + M+ EY + P E C+VDLL
Sbjct: 709 FRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLG 768
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RA + EA F+ M + VW +LL +C+ H N ++G+ AA+ +L++DP N VL
Sbjct: 769 RANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVL 828
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ N+YA+ +W++V + MK G++K PG SWIE+ K+H
Sbjct: 829 VSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHT 871
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/568 (27%), Positives = 279/568 (49%), Gaps = 81/568 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ AC L+ + G +VH + + N I+ MY KC L AR +FD M
Sbjct: 218 TFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRM 277
Query: 142 PQR-NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
P++ +VVSW +MI+ S NGQ A+ L+ +M ++ L P+ +TF + ++AC + G
Sbjct: 278 PEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 337
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+HA V+KS + ++ NALIAMY +F ++ +A N+F ++ D SW SM+ GF
Sbjct: 338 MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGF--- 394
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
V N + +EA+ + EM D PD + V S++ A
Sbjct: 395 -----VQNGL--------------------YHEALQFYHEMRDAGQKPDLVAVISIIAAS 429
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
+ GMQIH+Y +K G S++ V N+++
Sbjct: 430 ARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWT 489
Query: 353 -----------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+A ELFR L D + + ++ AC+ + + ++H YI
Sbjct: 490 TIIAGHAQNGSHSRALELFREVQL---EGIDLDVMMISSILLACSGLKLISSVKEIHSYI 546
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ GL+ D+ + NG++D+Y +CG++ A +F +E DVVSW+S+I Y G EAL
Sbjct: 547 IRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEAL 605
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+LF M+ +GV P+ ++LV +L+A + + +++G +++ + + G + S +VD+
Sbjct: 606 ELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDM 664
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTN 577
AR G + ++ + N + + D+V+W S++ + HG +D+ +R + + D
Sbjct: 665 YARCGTLEKSRNVFNFIR-NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIA 723
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMK 605
A++ C + SG E R + SMK
Sbjct: 724 FVAVLYAC---SHSGLMNEGRRFLESMK 748
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 160/550 (29%), Positives = 256/550 (46%), Gaps = 78/550 (14%)
Query: 54 LCKQNLYNEALVAFDFL---QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
+CK+ NEA + L Q+ + F + Y+ ++ C S ++L G++VH H+++S
Sbjct: 86 ICKRGSVNEAFQSLTDLFANQSPSQFSL-DEAYSSVLELCGSKKALSEGQQVHAHMITSN 144
Query: 111 CQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
++V L ++ MYGKCG L DA +FD MP + + +W AMI NG+ ++ELY
Sbjct: 145 ALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 204
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M SG+ D TF I++AC L G ++H IK + S + N+++ MYTK
Sbjct: 205 REMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKC 264
Query: 230 DRILDAWNVFSSIARK-DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ + A +F + K D+ SW SMI +S S
Sbjct: 265 NDLNGARQLFDRMPEKEDVVSWNSMISAYS----------------------------SN 296
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
+ EA+ LF EM L P+ T + L AC + QGM IH+ ++K +Y NV V
Sbjct: 297 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 356
Query: 349 NAILQHQA------------------------------------GELFRLFSLMLASQTK 372
NA++ A E + + M + K
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 416
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD + ++ A A + G Q+H Y MK GL D+ V N L+DMY K S+ +
Sbjct: 417 PDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 476
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ M D DVVSW+++I G+AQ G AL+LFR ++ G+ + + + +L ACS + L+
Sbjct: 477 FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLI 536
Query: 493 E--EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
+ + Y I + ++ ++ +VD+ G V A + F D+V W S+
Sbjct: 537 SSVKEIHSYIIRKGLSDLV----LQNGIVDVYGECGNVDYAARMFELIEF-KDVVSWTSM 591
Query: 551 LASCKTHGNV 560
+ SC H +
Sbjct: 592 I-SCYVHNGL 600
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 287/555 (51%), Gaps = 72/555 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ ++ C ++ L +K+H HI+ + L ++++ E A ++F +
Sbjct: 17 FVPILKNCPNIVEL---KKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVA 73
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQML-----QSGLMPDQFTFGSIIRACSGLCCV 197
N + AMI N AI +Y QML ++ + PD+FTF ++++C+GL C
Sbjct: 74 DPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCY 133
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG+Q+H HV K S+ + +N+L+ MY K D
Sbjct: 134 DLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCD--------------------------- 166
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
LD A VF EM + SWNT+I+G A ++F EM D+
Sbjct: 167 -SLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDK------------- 212
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
+++ I S + G Y++ A E FR ++ +PD I+
Sbjct: 213 -------TIFSWTAIVSGYARIGCYAD-----------ALEFFRRMQMV---GIEPDEIS 251
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
V+ ACA + +LE+G +H Y K G ++ V N L++MY KCGS+ R LF+ M
Sbjct: 252 LVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMN 311
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ DV+SWS++IVG A G EA++LF+ M+ + + PN +T VG+L+AC+H GL+ EGL+
Sbjct: 312 ERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLR 371
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ M+ +Y I P E C+V+LL +GR+ +A + I +M D +W SLL+SC++H
Sbjct: 372 YFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSH 431
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N+++ A E++L+++P ++ VLL N+YA GKW+ V+R+ M+ + ++K PG S
Sbjct: 432 SNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSS 491
Query: 618 IEIQTKIH--ASGND 630
IE+ + ASG+D
Sbjct: 492 IEVDNMVQEFASGDD 506
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 156/350 (44%), Gaps = 66/350 (18%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +C+ L LG++VH H+ + + V+ N ++ MY KC SL+DA VF+EM
Sbjct: 119 TFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEM 178
Query: 142 PQRNVVSWTAMIAGCSQNGQENA-------------------------------AIELYV 170
+R+ VSW +I+G + GQ A+E +
Sbjct: 179 TERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFR 238
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M G+ PD+ + S++ AC+ L + LG+ +H + K+ ++ NALI MY K
Sbjct: 239 RMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCG 298
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
I + +F + +D+ SW +T+I G+A+
Sbjct: 299 SIDEGRRLFDQMNERDVISW----------------------------STMIVGLANHGR 330
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI-----HSYIIKKGFYSNV 345
A+EA+ LF EM ++ P+ +T LL AC L +G++ Y I+ G
Sbjct: 331 AHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYG 390
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+ N L +G L + L+ KPD + ++ +C + ++LE+
Sbjct: 391 CLVN--LLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAV 438
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/637 (29%), Positives = 328/637 (51%), Gaps = 71/637 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYAD 85
+D AG++ D L++ IW+ + + K + + F ++ + +I P+ T+
Sbjct: 185 IDVAGKLFDRVLQKDCVIWNV-MLNGYAKCGASDSVIKGFSLMRMD---QISPNAVTFDC 240
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++S C+S + LG ++H ++ S + + N +L+MY KCG +DA +F M + +
Sbjct: 241 VLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRAD 300
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V+W MI+G Q+G ++ + +M+ SG++PD TF S++ + S + RQ+H
Sbjct: 301 TVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHC 360
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++++ + +ALI Y K + A +FS D+ + +MI G+
Sbjct: 361 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGY-------- 412
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+ N + +A+ +F + ++ P+ +T+ S+L L+
Sbjct: 413 LHNGLNI--------------------DALEMFRWLVKVKISPNEITLVSILPVIGGLLA 452
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------ELF----------------- 360
L G ++H +IIKKGF + + A++ A E+F
Sbjct: 453 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITR 512
Query: 361 -----------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
+F M S D ++ + + ACA + S G +H +++K LALD
Sbjct: 513 CAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALD 572
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-R 468
V+ + L+DMY KCG+L +A +F+ M++ ++VSW+S+I Y G +++L LF M
Sbjct: 573 VYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVE 632
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
SG RP+ +T + +++ C HVG V+EG++ +R M +YGI P +E +CVVDL RAGR+
Sbjct: 633 KSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRL 692
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA + + M F D VW +LL + + H NV++ K A+ ++ +DP NS VL+ N +
Sbjct: 693 SEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAH 752
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A++G+WE V ++ MKER V+K+PG SWIEI H
Sbjct: 753 ANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITH 789
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 241/531 (45%), Gaps = 72/531 (13%)
Query: 70 LQNNTNF--RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
L+N+ F P + L+ CS+L L+ G++VH ++ ++ D+ IL MY
Sbjct: 19 LRNSYRFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAM 78
Query: 128 CGSLEDARMVFDEMPQR--NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
CGS + +F + R ++ W ++I+ + G N A+ Y +ML G+ PD TF
Sbjct: 79 CGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFP 138
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
+++AC L L V + ++LI Y ++ +I A +F + +K
Sbjct: 139 CLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQK 198
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
D W M++G++K C ++ + FS M +
Sbjct: 199 DCVIWNVMLNGYAK----------------------------CGASDSVIKGFSLMRMDQ 230
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAG 357
+ P+ +T +L C S L + G+Q+H ++ G + N++L A
Sbjct: 231 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAI 290
Query: 358 ELFRL----------------------------FSLMLASQTKPDHITFNDVMGACAAMA 389
+LFR+ F M++S PD ITF+ ++ + +
Sbjct: 291 KLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFE 350
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+LE Q+HCYIM+ ++LD+F+ + L+D Y KC + A+++F+ DVV ++++I
Sbjct: 351 NLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMIS 410
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
GY G +AL++FR + + PN +TLV +L + ++ G +L+ + +
Sbjct: 411 GYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKG--F 468
Query: 510 PTRERRSC-VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
R C V+D+ A+ GR++ A + +++ DIV W S++ C N
Sbjct: 469 DNRCNIGCAVIDMYAKCGRMNLAYEIFGRLS-KRDIVSWNSMITRCAQSDN 518
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/579 (23%), Positives = 261/579 (45%), Gaps = 74/579 (12%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDI--WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ +C G++ R I W+ + SS + L N+AL AF F F +
Sbjct: 76 YAMCGSFSNCGKMFYRLDSRLSSIRPWN-SIISSFVRMGLLNQAL-AFYF--KMLCFGVS 131
Query: 80 P--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P ST+ L+ AC +L++ + + D + S + + + ++ Y + G ++ A +
Sbjct: 132 PDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKL 191
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD + Q++ V W M+ G ++ G ++ I+ + M + P+ TF ++ C+ +
Sbjct: 192 FDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLI 251
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG QLH V+ S +N+L++MY+K R DA +F ++R D +W MI G+
Sbjct: 252 DLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGY 311
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
+ ME E++ F EM ++PD +T SLL
Sbjct: 312 VQSGL-------ME---------------------ESLIFFYEMISSGVLPDAITFSSLL 343
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF--------- 360
+ + +L QIH YI++ ++ + +A++ A ++F
Sbjct: 344 PSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVV 403
Query: 361 -------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+F ++ + P+ IT ++ + +L++G +LH +I
Sbjct: 404 VFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFI 463
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K G + ++DMY KCG + A E+F + D+VSW+S+I AQ A+
Sbjct: 464 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAI 523
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+FR+M SG+ + V++ L+AC+++ G ++ M ++ + S ++D+
Sbjct: 524 DIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMI-KHSLALDVYSESTLIDM 582
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
A+ G + A + + M + +IV W S++A+ HG +
Sbjct: 583 YAKCGNLKAAMNVFDTMK-EKNIVSWNSIIAAYGNHGKL 620
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 183/594 (30%), Positives = 305/594 (51%), Gaps = 82/594 (13%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSK-----CQPDAVLH------NHILNMYGKCGSL 131
++ L+++C L+LG +H ++ + C L N +++MY +CG
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRR 73
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRA 190
EDA VFDEM R+ VSW ++IA G A+ L+ +ML+S D+ TF +++
Sbjct: 74 EDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVLSE 130
Query: 191 CS--GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
C+ G + +H V+ + + NAL+ Y + A VF +A K
Sbjct: 131 CARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEK--- 187
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
N+ +W +I+G+A E+ SLF +M R +
Sbjct: 188 -------------------------NVITWTAMISGMARAELYKESFSLFGQM-IRTVDA 221
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------- 353
+ T L AC L+ +G Q+H ++K GF +++ V + ++
Sbjct: 222 NNATYSCTLLACARSLAAREGQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVF 281
Query: 354 ------------------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
Q G + F LF+ M+ + + D T + V+GA A A
Sbjct: 282 RSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFA 341
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G Q+H ++K ++ +V NGL++MY KCG L + ++F+ M + VSW+S+I +A
Sbjct: 342 LGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFA 401
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
+ G G E +LF M++ G +P VT + +L ACSHVG ++GL++ M ++YG++P
Sbjct: 402 RHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRM 461
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E +CVVD+L RAG + +A+ FI F D ++W++L+ +C HGN +VGK AAE +L
Sbjct: 462 EHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLL 521
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+DP+ +AA VLL NIY+S G+W++ A++M M E G+RK G+SWIE++ ++H+
Sbjct: 522 LDPSCTAAYVLLSNIYSSEGRWDDRAKVMKRMSEMGLRKDTGKSWIELEKEVHS 575
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 157/352 (44%), Gaps = 37/352 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + + LY E+ F + + +TY+ + AC+ + + G++VH ++ +
Sbjct: 195 MISGMARAELYKESFSLFGQMIRTVD--ANNATYSCTLLACARSLAAREGQQVHGLVVKA 252
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + + ++++Y KCG +EDA VF + + V T ++ G +QNG E A EL+
Sbjct: 253 GFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELF 312
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M+ +G D+ T +++ A LG+Q+HA VIK G + N L+ MY+K
Sbjct: 313 AEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKC 372
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ ++ VF + K+ SW N+IIA A
Sbjct: 373 GELRESVQVFDEMPSKNSVSW----------------------------NSIIAAFARHG 404
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP--- 346
+ +E LF M P +T SLL AC+ S +G++I + + + Y +P
Sbjct: 405 HGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQ--YGVLPRME 462
Query: 347 --VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
C + +AG L S + + + +MGAC+ + E+G
Sbjct: 463 HYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHGNSEVGKH 514
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 288/554 (51%), Gaps = 74/554 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +L Y + L+ A ++F+E+ ++ V++ +I G ++G AI L+++M QSG
Sbjct: 182 NVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHK 241
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P FTF +++A GL LG+QLH + + N ++ Y+K DR+L+
Sbjct: 242 PSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLET--- 298
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
R +FNEM + S+N +I+ + E+++LF
Sbjct: 299 -------------------------RNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLF 333
Query: 299 SEMG----DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
EM DR P ++L + SL G Q+H I S + V N+++
Sbjct: 334 REMQCMGFDRRNFP----FATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDM 389
Query: 355 QA------------------------------------GELFRLFSLMLASQTKPDHITF 378
A G +LF+ M + + D TF
Sbjct: 390 YAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTF 449
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ A A ASL +G QLH +I+++G +VF +GL+DMY KCGS+ A ++F M D
Sbjct: 450 ATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 509
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
+ VSW++LI YA G GE A+ F +M SG++P+ V+++GVL ACSH G VE+G +
Sbjct: 510 RNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEF 569
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ M YGI P ++ +C++DLL R GR EAE +++M F+ D ++W S+L +C+ +
Sbjct: 570 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYK 629
Query: 559 NVDVGKRAAENILKIDP-TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N + +RAAE + ++ ++AA V + NIYA++GKWE V + +M+ERG++KVP SW
Sbjct: 630 NQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSW 689
Query: 618 IEIQTKIHA-SGND 630
+E+ KIH S ND
Sbjct: 690 VEVNHKIHVFSSND 703
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 211/497 (42%), Gaps = 72/497 (14%)
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
KV+D + + V N +++ Y K G L AR +FD MP R VV+WT ++ + N
Sbjct: 65 KVYDEM----PHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNN 120
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ- 219
+ A +L+ QM +S +PD TF +++ C+ Q+HA +K ++L
Sbjct: 121 HFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTV 180
Query: 220 -NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N L+ Y + R+ A +F I KD ++ ++I G+ K
Sbjct: 181 CNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGL---------------- 224
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
EA+ LF +M P T +L A G Q+H +
Sbjct: 225 ------------YTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVT 272
Query: 339 KGFYSNVPVCNAILQ---------------HQAGEL-FRLFSLMLASQTKPD-------- 374
GF + V N IL ++ EL F ++++++S ++ +
Sbjct: 273 TGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNL 332
Query: 375 ------------HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
+ F ++ A ++SL++G Q+HC + + V N L+DMY K
Sbjct: 333 FREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAK 392
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
C A +F + VSW++LI GY Q G LKLF +MR + +R + T V
Sbjct: 393 CEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATV 452
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L A + + G QL+ + G + S +VD+ A+ G + +A +M D
Sbjct: 453 LKASAGFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DR 510
Query: 543 DIVVWKSLLASCKTHGN 559
+ V W +L+++ +G+
Sbjct: 511 NAVSWNALISAYADNGD 527
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 167/345 (48%), Gaps = 44/345 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ SS + Y E+L F +Q F R +A ++S ++L SLQ+GR+VH + +
Sbjct: 316 VISSYSQAEQYEESLNLFREMQC-MGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVA 374
Query: 110 KCQPDAVLH--NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
D++LH N +++MY KC ++A ++F + QR+ VSWTA+I+G Q G A ++
Sbjct: 375 TA--DSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLK 432
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L+ +M + L DQ TF ++++A +G + LG+QLHA +I+S + ++ S + L+ MY
Sbjct: 433 LFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 492
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K I DA VF + ++ S WN +I+ A
Sbjct: 493 KCGSIKDAVQVFEEMPDRNAVS----------------------------WNALISAYAD 524
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ-------IHSYIIKKG 340
+ A+ F++M L PD +++ +L AC+ + QG + I+ KK
Sbjct: 525 NGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKK 584
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
Y+ C L + G LM +PD I ++ V+ AC
Sbjct: 585 HYA----CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 625
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 200/428 (46%), Gaps = 27/428 (6%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSL 93
F++I D D L + K LY EA+ F ++ + + +PS T++ ++ A L
Sbjct: 201 FEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGH---KPSDFTFSGVLKAVVGL 257
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
LG+++H +++ DA + N IL+ Y K + + R +F+EMP+ + VS+ +I
Sbjct: 258 HDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVI 317
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+ SQ Q ++ L+ +M G F F +++ + L + +GRQ+H I +
Sbjct: 318 SSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATAD 377
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM 270
S L N+L+ MY K + +A +F S++++ SW ++I G+ + +F +M
Sbjct: 378 SILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKM 437
Query: 271 ESPNL----ASWNTII---AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
NL +++ T++ AG AS + + G+ E + G + + C
Sbjct: 438 RGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG-- 495
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVM 382
S+ +Q+ + + S + +A + GE F+ M+ S +PD ++ V+
Sbjct: 496 -SIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVL 554
Query: 383 GACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPD 440
AC+ +E GT+ + G+ ++D+ + G A +L + M +PD
Sbjct: 555 IACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 614
Query: 441 VVSWSSLI 448
+ WSS++
Sbjct: 615 EIMWSSVL 622
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 172/401 (42%), Gaps = 47/401 (11%)
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
R++ A +IK+ + N + + ++ A V+ + K+ S +MI G+ K
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 260 --LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
L AR +F+ M + +W ++ A ++ +EA LF +M +PD +T +LL
Sbjct: 89 GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSN--VPVCNAILQ---------------------- 353
C + Q+H++ +K GF +N + VCN +L+
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKD 208
Query: 354 -----------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ G E LF M S KP TF+ V+ A + +G QLH
Sbjct: 209 SVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHG 268
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ TG + D V N ++ Y K + R LFN M + D VS++ +I Y+Q EE
Sbjct: 269 LSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEE 328
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY--RIMQNEYGIIPTRERRSC 517
+L LFR M+ G + +L+ +++ ++ G Q++ I+ I+ +
Sbjct: 329 SLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHV---GNS 385
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+VD+ A+ EAE ++ V W +L++ G
Sbjct: 386 LVDMYAKCEMFDEAELIFKSLS-QRSTVSWTALISGYVQKG 425
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 321/643 (49%), Gaps = 70/643 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C L+ A ++ D + D + + S+ EAL F +Q + + P+
Sbjct: 225 YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS---LAPN 281
Query: 82 TYADL--ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
TY + + AC ++ G +H +L S + + N ++ MY + G + +A +F
Sbjct: 282 TYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFY 341
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M + +SW +M++G QNG + A++ Y +M +G PD SII A +
Sbjct: 342 NMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLH 401
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+HA+ +K+ S L N+L+ MY KF
Sbjct: 402 GMQIHAYAMKNGLDSDLQVGNSLVDMYAKF----------------------------CS 433
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ + +F++M ++ SW TIIAG A + + A+ LF E+ + D + + S+L A
Sbjct: 434 MKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLA 493
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------------- 353
C+ + +IHSYII+KG S++ + N I+
Sbjct: 494 CSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSW 552
Query: 354 --------HQ--AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
H A E LF LM + +PD I+ ++ A A++++L+ G ++H ++++
Sbjct: 553 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 612
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G L+ + + L+DMY +CG+L +R +FNF+ + D+V W+S+I Y GCG A+ L
Sbjct: 613 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 672
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
FRRM + P+H+ V VL ACSH GL+ EG + M+ EY + P E +C+VDLL
Sbjct: 673 FRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLG 732
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RA + EA F+ M + VW +LL +C+ H N ++G+ AA+ +L++DP N VL
Sbjct: 733 RANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVL 792
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ N+Y++ +W++V + MK G++K PG SWIE+ K+H
Sbjct: 793 VSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHT 835
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/568 (27%), Positives = 279/568 (49%), Gaps = 81/568 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ AC L+ + G +VH + + N I+ MY KC L AR +FD M
Sbjct: 182 TFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRM 241
Query: 142 PQR-NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
P++ +VVSW +MI+ S NGQ A+ L+ +M ++ L P+ +TF + ++AC + G
Sbjct: 242 PEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 301
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+HA V+KS + ++ NALIAMY +F ++ +A N+F ++ D SW SM+ GF +
Sbjct: 302 MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ- 360
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
N + +EA+ + EM D PD + V S++ A
Sbjct: 361 ------------------NGLY---------HEALQFYHEMRDAGQKPDLVAVISIIAAS 393
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
+ GMQIH+Y +K G S++ V N+++
Sbjct: 394 ARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWT 453
Query: 353 -----------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+A ELFR L D + + ++ AC+ + + ++H YI
Sbjct: 454 TIIAGHAQNGSHSRALELFREVQL---EGIDLDVMMISSILLACSGLKLISSVKEIHSYI 510
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ GL+ D+ + NG++D+Y +CG++ A +F +E DVVSW+S+I Y G EAL
Sbjct: 511 IRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEAL 569
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+LF M+ +GV P+ ++LV +L+A + + +++G +++ + + G + S +VD+
Sbjct: 570 ELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDM 628
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTN 577
AR G + ++ + N + + D+V+W S++ + HG +D+ +R + + D
Sbjct: 629 YARCGTLEKSRNVFNFIR-NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIA 687
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMK 605
A++ C + SG E R + SMK
Sbjct: 688 FVAVLYAC---SHSGLMNEGRRFLESMK 712
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 160/550 (29%), Positives = 256/550 (46%), Gaps = 78/550 (14%)
Query: 54 LCKQNLYNEALVAFDFL---QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
+CK+ NEA + L Q+ + F + Y+ ++ C S ++L G++VH H+++S
Sbjct: 50 ICKRGSVNEAFQSLTDLFANQSPSQFSL-DEAYSSVLELCGSKKALSEGQQVHAHMITSN 108
Query: 111 CQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
++V L ++ MYGKCG L DA +FD MP + + +W AMI NG+ ++ELY
Sbjct: 109 ALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 168
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M SG+ D TF I++AC L G ++H IK + S + N+++ MYTK
Sbjct: 169 REMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKC 228
Query: 230 DRILDAWNVFSSIARK-DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ + A +F + K D+ SW SMI +S S
Sbjct: 229 NDLNGARQLFDRMPEKEDVVSWNSMISAYS----------------------------SN 260
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
+ EA+ LF EM L P+ T + L AC + QGM IH+ ++K +Y NV V
Sbjct: 261 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 320
Query: 349 NAILQHQA------------------------------------GELFRLFSLMLASQTK 372
NA++ A E + + M + K
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 380
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD + ++ A A + G Q+H Y MK GL D+ V N L+DMY K S+ +
Sbjct: 381 PDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 440
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ M D DVVSW+++I G+AQ G AL+LFR ++ G+ + + + +L ACS + L+
Sbjct: 441 FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLI 500
Query: 493 E--EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
+ + Y I + ++ ++ +VD+ G V A + F D+V W S+
Sbjct: 501 SSVKEIHSYIIRKGLSDLV----LQNGIVDVYGECGNVDYAARMFELIEF-KDVVSWTSM 555
Query: 551 LASCKTHGNV 560
+ SC H +
Sbjct: 556 I-SCYVHNGL 564
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 333/648 (51%), Gaps = 54/648 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
+ A V D R + W + S + LY EA+ F + + P+ + A
Sbjct: 324 MAHARYVFDEMRHRNEASWS-TMLSGYVRVGLYEEAVGLFCQMWG---LGVEPNGFMVAS 379
Query: 86 LISACS-SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
LI+ACS S G +VH ++ + D + +++ YG G + +A+ +F+EMP
Sbjct: 380 LITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 439
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NVVSWT+++ G S +G + +Y +M Q G+ +Q TF ++ +C L LG Q+
Sbjct: 440 NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 499
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK----- 259
H+I+ + N+LI+M++ F + +A VF + DI SW +MI ++
Sbjct: 500 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 559
Query: 260 -----LDFARTVFNEMESPNLA------------SWNTIIAGV-------ASCSNANEAM 295
+ R + NE S L+ W I G+ ++ N +
Sbjct: 560 ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 619
Query: 296 SLFSEMG---DRELIPDGLTVRSLLCACTSPLSLY-------QGMQIHSYIIKKGFYSNV 345
+L+SE G D EL+ +T R L+ + S ++ Y G++I + +++ G V
Sbjct: 620 TLYSEAGRSEDAELVFQAMTERDLI-SWNSMMACYVQDGKCLDGLKILAELLQMGKPDRV 678
Query: 346 PVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
NA++ + E + + L+ ++IT + A A +A LE G QLH
Sbjct: 679 -TWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGL 736
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++K G D+ V N MDMY KCG + ++ + +SW+ LI +A+ GC ++A
Sbjct: 737 VIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKA 796
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
+ F M G +P+HVT V +L+AC+H GLV+EGL Y M E+G+ P E C++D
Sbjct: 797 RETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIID 856
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R+GR+ AE FI +M + + W+SLLA+C+ HGN+++ ++ AE++L++DP++ +A
Sbjct: 857 LLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSA 916
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
VL N+ A+SGKWE+V L M ++K P SW++++ K+H+ G
Sbjct: 917 YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFG 964
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/603 (25%), Positives = 264/603 (43%), Gaps = 92/603 (15%)
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHIL-NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
Q GR +L S + V NH L + + KCG +EDA +F M +R+VVSW AMI G
Sbjct: 108 QNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 167
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+ G + + ++ ML+ GL+PD +T GS++RA + + + Q+H + + +GS+
Sbjct: 168 YAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSY 227
Query: 216 LISQ-----------------------------------------------NALIAMYTK 228
I NALI MY K
Sbjct: 228 DIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAK 287
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF-----ARTVFNEMESPNLASWNTIIA 283
I DA F + K++ SW S+I G++K + AR VF+EM N ASW+T+++
Sbjct: 288 SGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLS 347
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT-SPLSLYQGMQIHSYIIKKGFY 342
G EA+ LF +M + P+G V SL+ AC+ S +G Q+H +++K G
Sbjct: 348 GYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGIL 407
Query: 343 SNVPVCNAILQH------------------------------------QAGELFRLFSLM 366
+V V A++ GE+ ++ M
Sbjct: 408 GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM 467
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+ TF V +C + +G Q+ +I++ G V V N L+ M+ S+
Sbjct: 468 RQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSV 527
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A +F+ M + D++SW+++I YA G E+L+ F MR N TL +L+ C
Sbjct: 528 EEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 587
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
S V ++ G ++ ++ + G+ + ++ L + AGR +AE + Q + D++
Sbjct: 588 SSVDNLKWGRGIHGLVV-KLGLDSNVCICNTLLTLYSEAGRSEDAE-LVFQAMTERDLIS 645
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W S++A G G + +L++ + L +A + + E + ++E
Sbjct: 646 WNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 705
Query: 607 RGV 609
+G+
Sbjct: 706 KGI 708
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 178/430 (41%), Gaps = 92/430 (21%)
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS- 258
G +H H+I + GS L LI Y K ++ A NVF + + + SW +M+ G+S
Sbjct: 49 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108
Query: 259 ---------------------------------KLDFARTVFNEMESPNLASWNTIIAGV 285
K++ A +F M ++ SWN +I G
Sbjct: 109 NGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGY 168
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A A+++ +F M L+PD T+ S+L A L QIH I + G+ S
Sbjct: 169 AVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYD 228
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
V ++ A + SL A + + D+ + A + TG
Sbjct: 229 IVTGLLINAYA----KNGSLRSAKDLRKGMLK-KDLFSSTALI---------------TG 268
Query: 406 LALD-VFVM-NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG------ 457
A + ++ M N L+DMY K G + A+ F+ ME+ +V+SW+SLI GYA+ G G
Sbjct: 269 YAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHAR 328
Query: 458 ---------------------------EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
EEA+ LF +M GV PN + ++TACS G
Sbjct: 329 YVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSG 388
Query: 491 -LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
+ +EG Q++ + + GI+ + +V G V+ A+ +M D ++V W S
Sbjct: 389 YMADEGFQVHGFVV-KTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTS 446
Query: 550 LLASCKTHGN 559
L+ GN
Sbjct: 447 LMVGYSDSGN 456
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 215/492 (43%), Gaps = 50/492 (10%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G + AR VFDEM RN SW+ M++G + G A+ L+ QM G+ P+ F S+I
Sbjct: 322 GHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLI 381
Query: 189 RACSGLCCVG-LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
ACS + G Q+H V+K+ + AL+ Y + +A +F + ++
Sbjct: 382 TACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNV 441
Query: 248 TSWGSMIDGFSKLDFARTVFN---EMESPNLA-SWNTIIAGVASCSNANEAMSLFSEMGD 303
SW S++ G+S V N M ++ + NT +SC + + + +G
Sbjct: 442 VSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLG- 500
Query: 304 RELIPDGLTVR-SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----- 357
+I G S+ + S S + ++ Y+ ++ NA++ A
Sbjct: 501 -HIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 559
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E R F M + + T + ++ C+++ +L+ G +H ++K GL +V + N L+
Sbjct: 560 ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 619
Query: 418 DMYVKCGSLGSARELFNFMED----------------------------------PDVVS 443
+Y + G A +F M + PD V+
Sbjct: 620 TLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVT 679
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W++LI G+A+ EA+K ++ +R G+ N++T+V L A +++ ++EEG QL+ ++
Sbjct: 680 WNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVI 738
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
+ G + +D+ + G +H+ + Q + + W L+++ HG
Sbjct: 739 -KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKA 796
Query: 564 KRAAENILKIDP 575
+ +LK+ P
Sbjct: 797 RETFHEMLKLGP 808
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 128/297 (43%), Gaps = 46/297 (15%)
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
G L L+ ++ T+ D + ++ C + + G +H +++ G D+ + L
Sbjct: 12 GRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKL 71
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+ YVK G + +AR +F+ M + VVSW++++ GY+Q G E+A LF MR GV+ NH
Sbjct: 72 IIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH 131
Query: 477 VTLVGVLTACSHV----------------------------GLVEEGLQLYRIMQNEYGI 508
LV + C + G ++ ++R M G+
Sbjct: 132 -ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRG-GL 189
Query: 509 IPTRERRSCVVDLLARAGRV---HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
+P V+ A G + ++ I Q+ + +V L+ + +G++ K
Sbjct: 190 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKD 249
Query: 566 AAENILKIDPTNSAALVL-------------LCNIYASSGKWEEVARLMGSMKERGV 609
+ +LK D +S AL+ L ++YA SG+ E+ R M+E+ V
Sbjct: 250 LRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNV 306
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 312/618 (50%), Gaps = 73/618 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS--ACSSLRSLQLGRKVHDHIL 107
L SL ++ + E L F + + +P + ++ AC LR + G +H +
Sbjct: 31 LLKSLSREKQWEEVLYHFSHMFRDEE---KPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 108 SS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
D + + ++ MY KCG + +A +FDE+ + ++V+W++M++G +NG A+
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAV 147
Query: 167 ELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
E + +M + S + PD+ T +++ AC+ L LGR +H VI+ + L N+L+
Sbjct: 148 EFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNC 207
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
Y K +A N+F IA KD+ SW +T+IA
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISW----------------------------STVIACY 239
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A EA+ +F++M D P+ TV +L AC + L QG + H I+KG + V
Sbjct: 240 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 299
Query: 346 PVCNAILQ-----HQAGELFRLFS--------------------------------LMLA 368
V A++ E + +FS ++L
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ T+PD I V+G+C+ + LE H Y++K G + F+ L+++Y +CGSLG+
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACS 487
A ++FN + D V W+SLI GY G G +AL+ F M +SS V+PN VT + +L+ACS
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GL+ EGL+++++M N+Y + P E + +VDLL R G + A + +M F +
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 539
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL +C+ H N ++ + A+ + +++ ++ +L+ N+Y G+WE V +L S+K+R
Sbjct: 540 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQR 599
Query: 608 GVRKVPGQSWIEIQTKIH 625
G++K +S IEI+ K+H
Sbjct: 600 GIKKGLAESLIEIRRKVH 617
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 270/504 (53%), Gaps = 11/504 (2%)
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
K L AR +FD + +R+++ W +I +N + I L+ +++ +PD FT
Sbjct: 59 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPC 117
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+I+ C+ L V G+Q+H +K GS + Q +L+ MY+K I A VF + KD
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 177
Query: 247 ITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+ W S+IDG+++ +D A +F EM + SW ++ G++ C A LF +M
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPC 237
Query: 304 RELIPDGLTVRSLLCACT--SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFR 361
R L+ + + + S L L+ M I + N+ + L Q + +
Sbjct: 238 RNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVT-----WNLMIAGYELNGQFMDAVK 292
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
+F +ML ++P H T V+ A + +A L G +H Y+ K G LD + L++MY
Sbjct: 293 MFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYA 352
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG + SA +F ++ V W+++IVG G AL LF M +G++PN + +G
Sbjct: 353 KCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIG 412
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL AC+H GLV++G Q + +M NEY I PT E C+VD+L RAG + EA++ I M
Sbjct: 413 VLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPIS 472
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ V+W SLL + HG +D+G+ AA+ ++++ P +LL N+YA+SG WE+V+ +
Sbjct: 473 PNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVR 532
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
M +RG RK PG S +E + +H
Sbjct: 533 EMMYKRGFRKDPGCSSVEHKGTLH 556
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 198/466 (42%), Gaps = 69/466 (14%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+I C+ L +Q G+++H L D + ++NMY KCG ++ AR VFD M ++
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 177
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
VV W ++I G ++ G+ + A++L+ + MP++ F
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEE------MPERDAF--------------------- 210
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDF 262
S L+ +K ++ A +F + +++ SW +MI+G+ K D
Sbjct: 211 ------------SWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDS 258
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A +F +M +L +WN +IAG +A+ +F M P T+ S+L A +
Sbjct: 259 ALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG 318
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKP-DHITFN 379
L +G IHSY+ K GF + + ++++ A G + ++ A Q K H T
Sbjct: 319 LAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAI 378
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-- 437
V MA+ + L + KTGL + + G+++ G + R+ F+ M
Sbjct: 379 IVGLGIHGMANHALALFLE--MCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNE 436
Query: 438 ---DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE- 493
+P + + L+ + G EEA M + PN V + +L + G ++
Sbjct: 437 YKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMP---ISPNKVIWMSLLGGSRNHGKIDI 493
Query: 494 -------------EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
E + Y ++ N Y E+ S V +++ + G
Sbjct: 494 GEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRG 539
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 41/285 (14%)
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RPS T ++SA S L L GR +H ++ + + D +L ++ MY KCG +E A
Sbjct: 303 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 362
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF + ++ V WTA+I G +G N A+ L+++M ++GL P+ F ++ AC+
Sbjct: 363 VFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGL 422
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V GRQ FD +++ + + ++ +G ++D
Sbjct: 423 VDDGRQY-------------------------FDMMMNEYKIEPTLEH-----YGCLVDI 452
Query: 257 FSK---LDFARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+ L+ A+ M SPN W +++ G S ++ + ++ E+ P+ +
Sbjct: 453 LCRAGHLEEAKNTIENMPISPNKVIWMSLLGG--SRNHGKIDIGEYAAQRVIEVAPETIG 510
Query: 313 VRSLLCACTSPLSLYQGM-QIHSYIIKKGFYSNVPVCNAILQHQA 356
LL + +++ + + + K+GF + P C+++ +H+
Sbjct: 511 CYILLSNMYAASGMWEKVSHVREMMYKRGFRKD-PGCSSV-EHKG 553
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY--VKCGSLGSARELFNFMEDP 439
MG CA QLH + +KT + FV + L+ +Y K LG AR +F+ ++
Sbjct: 21 MGLCAPQEV----EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR 76
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
++ W+++I Y + + + LF + + P++ TL V+ C+ +G+V+EG Q++
Sbjct: 77 SLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIH 135
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ + G + +V++ ++ G + A + M D D+V+W SL+ G
Sbjct: 136 GLAL-KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGYARCGE 193
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+D+ + E + + D + LV + + GK E +L M R +
Sbjct: 194 IDIALQLFEEMPERDAFSWTVLV---DGLSKCGKVESARKLFDQMPCRNL 240
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 275/531 (51%), Gaps = 33/531 (6%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
R VH I+ + ++ L ++ Y + AR VFDE+P+RNV+ MI N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G ++++ M + PD +TF +++ACS + +GR++H K S L
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
N L++MY K GF L AR V +EM ++ SWN
Sbjct: 179 NGLVSMYGKC--------------------------GF--LSEARLVLDEMSRRDVVSWN 210
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+++ G A ++A+ + EM ++ D T+ SLL A S + M + K
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-VSNTTTENVMYVKDMFFKM 269
Query: 340 GFYS----NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
G S NV + + E L+S M A +PD ++ V+ AC ++L +G
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H YI + L ++ + N L+DMY KCG L AR++F M+ DVVSW+++I Y G
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G +A+ LF +++ SG+ P+ + V L ACSH GL+EEG +++M + Y I P E
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 449
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VDLL RAG+V EA FI M+ + + VW +LL +C+ H + D+G AA+ + ++ P
Sbjct: 450 ACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAP 509
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
S VLL NIYA +G+WEEV + MK +G++K PG S +E+ IH
Sbjct: 510 EQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 560
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 180/414 (43%), Gaps = 60/414 (14%)
Query: 35 VDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
V S + FD+I + + + S Y E + F + N R T+ ++
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLK 148
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
ACS ++ +GRK+H + N +++MYGKCG L +AR+V DEM +R+VVS
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +++ G +QN + + A+E+ +M + D T S++ A S + ++ +
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV---MYVKDM 265
Query: 209 KSEHGSH-LISQNALIAMYTKFDRILDAWNVFSS-------------------------- 241
+ G L+S N +I +Y K ++A ++S
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 242 ---------IARKDITS----WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGV 285
I RK + ++ID ++K L+ AR VF M+S ++ SW +I+
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
+A++LFS++ D L+PD + + L AC+ L +G + + Y
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS--CFKLMTDHYKIT 443
Query: 346 P-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
P C L +AG++ + + +P+ + ++GAC + ++G
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 57/373 (15%)
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTI----IAGVASCSNANEAMSLFSEMGDREL 306
G ++D + + RTV + + +L +++ + AS + A +F E+ +R +
Sbjct: 46 GQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNV 105
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLM 366
I + +RS + GFY GE ++F M
Sbjct: 106 IIINVMIRSY--------------------VNNGFY--------------GEGVKVFGTM 131
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+PDH TF V+ AC+ ++ +G ++H K GL+ +FV NGL+ MY KCG L
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
AR + + M DVVSW+SL+VGYAQ ++AL++ R M S + + T+ +L A
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV-----VDLLARAGRVHEAEDFINQM--- 538
S+ E + + M + G ++S V + + + EA + ++M
Sbjct: 252 SNT--TTENVMYVKDMFFKMG------KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD 303
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENI--LKIDPTNSAALVLLCNIYASSGKWEE 596
F+ D V S+L +C + +GK+ I K+ P N L ++YA G E+
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEK 362
Query: 597 VARLMGSMKERGV 609
+ +MK R V
Sbjct: 363 ARDVFENMKSRDV 375
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 187/604 (30%), Positives = 304/604 (50%), Gaps = 71/604 (11%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D ++ FR+ P+ T+ ++ ACS+L L GR +H H + D + +++
Sbjct: 83 AIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALID 142
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQF 182
+Y +C A VF +MP R+VV+W AM+AG + +G + AI + M + GL P+
Sbjct: 143 LYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNAS 202
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKS---EHGSHLISQNALIAMYTKFDRILDAWNVF 239
T S++ + + G +HA+ +++ ++ ++ AL+ MY K ++ A VF
Sbjct: 203 TLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVF 262
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ TV NE+ +W+ +I G C EA +LF
Sbjct: 263 HGM----------------------TVRNEV------TWSALIGGFVLCDRMTEAFNLFK 294
Query: 300 EMGDREL-IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------ 352
+M + +V S L C S L G Q+H+ + K G ++++ N++L
Sbjct: 295 DMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKA 354
Query: 353 ------------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVM 382
+A E F +F M A +PD T ++
Sbjct: 355 GLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLI 414
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
AC+ +A+L+ G H ++ GLAL+ + N L+DMY KCG + +R++F+ M D+V
Sbjct: 415 PACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIV 474
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
SW+++I GY G G+EA LF M++ G P+ VT + ++ ACSH GLV EG + M
Sbjct: 475 SWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTM 534
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
++YGI+P E C+VDLLAR G + EA FI M D+ VW +LL +C+ H N+D+
Sbjct: 535 THKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDL 594
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
GK+ + I K+ P + VLL NI++++G+++E A + K +G +K PG SWIEI
Sbjct: 595 GKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEING 654
Query: 623 KIHA 626
+HA
Sbjct: 655 SLHA 658
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 222/492 (45%), Gaps = 86/492 (17%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G L AR VFD +P + ++ A+I S G +AAI+LY ML + P+++TF ++
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+ACS L + GR +HAH + L ALI +Y + R A NVF+ + +D+
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-ELI 307
+W N ++AG A+ + A++ +M DR L
Sbjct: 167 AW----------------------------NAMLAGYANHGMYHHAIAHLLDMQDRGGLR 198
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN---VPVCNAILQHQAG------- 357
P+ T+ SLL +L+QG +H+Y ++ N V + A+L A
Sbjct: 199 PNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYA 258
Query: 358 -----------------------------ELFRLFSLMLA-SQTKPDHITFNDVMGACAA 387
E F LF ML + + CA+
Sbjct: 259 CRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCAS 318
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+A L MGTQLH + K+G+ D+ N L+ MY K G + A LF+ + D +S+ +L
Sbjct: 319 LADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGAL 378
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
+ GY Q G EEA +F++M++ V+P+ T+V ++ ACSH+ ++ G + +G
Sbjct: 379 LSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG-------RCSHG 431
Query: 508 IIPTR----ERRSC--VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ R E C ++D+ A+ GR+ + ++M DIV W +++A HG
Sbjct: 432 SVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMP-ARDIVSWNTMIAGYGIHG--- 487
Query: 562 VGKRAAENILKI 573
+GK A L +
Sbjct: 488 LGKEATTLFLSM 499
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 46/361 (12%)
Query: 245 KDITSWGSMID---GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
KD W ++ +L AR VF+ + +P+ ++N +I + + A+ L+ M
Sbjct: 31 KDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSM 90
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------- 353
+ P+ T +L AC++ L G IH++ G ++++ V A++
Sbjct: 91 LYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARF 150
Query: 354 HQAGELFRLFSL--------MLASQT---------------------KPDHITFNDVMGA 384
A +F + MLA +P+ T ++
Sbjct: 151 GPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPL 210
Query: 385 CAAMASLEMGTQLHCYIMKTGLALD---VFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
A +L GT +H Y ++ L + V + L+DMY KC L A +F+ M +
Sbjct: 211 LAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNE 270
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGV-RPNHVTLVGVLTACSHVGLVEEGLQLYR 500
V+WS+LI G+ EA LF+ M G+ + ++ L C+ + + G QL+
Sbjct: 271 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHA 330
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
++ GI + ++ + A+AG ++EA +++A D I + +LL+ +G
Sbjct: 331 LLAKS-GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTI-SYGALLSGYVQNGKA 388
Query: 561 D 561
+
Sbjct: 389 E 389
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 187/591 (31%), Positives = 303/591 (51%), Gaps = 59/591 (9%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
R+ P+ T+ + ACS+L GR +H H + + Q D + +L+MY KC L DA
Sbjct: 120 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 179
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE--LYVQMLQSGLMPDQFTFGSIIRACS 192
+F MP R++V+W AM+AG + +G + A+ L +QM L P+ T +++ +
Sbjct: 180 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 239
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ G +HA+ I++ S+ S++ L +LD + GS
Sbjct: 240 QQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMY-----------AKCGS 288
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL-IPDGL 311
++ +AR VF+ M + N +W+ +I G CS +A LF M + L
Sbjct: 289 LL-------YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------- 352
++ S L AC S L G Q+H+ + K G ++++ N++L
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
Query: 353 -----------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+A E F +F M A +PD T ++ AC+ +A+L+ G
Sbjct: 402 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 461
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H ++ GLA + + N L+DMY KCG + +R++FN M D+VSW+++I GY G
Sbjct: 462 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 521
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G+EA LF M + G P+ VT + +L+ACSH GLV EG + +M++ YG+ P E
Sbjct: 522 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHY 581
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C+VDLL+R G + EA +FI M D+ VW +LL +C+ + N+D+GK+ + I ++ P
Sbjct: 582 ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP 641
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ VLL NIY+++G+++E A + K +G +K PG SWIEI +HA
Sbjct: 642 EGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHA 692
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 230/503 (45%), Gaps = 56/503 (11%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA--IELYVQMLQSGLMPDQFTFGS 186
G L A +FD++P +V ++ +I S + AA + LY +ML+ + P+ +TF
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++ACS L GR +H H I + + L AL+ MY K + DA ++F+++ +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMES---------PNLASWNTIIAGVASCSNANEAMS- 296
+ +W +M+ G++ + S PN ++ ++ +A + S
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 297 --------LFSEMGDRELIPDGLTVRSLL----CACTSPL---SLYQGMQIHSYIIKKGF 341
L S + + DG+ + + L C S L ++ M + +
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 342 YSNVPVCNAILQHQAGELFRLFSLMLASQ---TKPDHITFNDVMGACAAMASLEMGTQLH 398
+C+ + Q F LF MLA P I + ACA++ L MG QLH
Sbjct: 311 IGGFVLCSRMTQ-----AFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLH 363
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+ K+G+ D+ N L+ MY K G + A LF+ M D VS+S+L+ GY Q G E
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHV-----GLVEEGLQLYRIMQNEYGIIPTRE 513
EA +F++M++ V P+ T+V ++ ACSH+ G G + R + +E I
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC---- 479
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+ ++D+ A+ GR+ + N M DIV W +++A HG +GK A L++
Sbjct: 480 --NALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LGKEATALFLEM 533
Query: 574 D----PTNSAALVLLCNIYASSG 592
+ P + + L + + SG
Sbjct: 534 NNLGFPPDGVTFICLLSACSHSG 556
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 296/586 (50%), Gaps = 75/586 (12%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD--EMPQR 144
+ +C+ +L G+++H H+L + + ++NMY KC ++ + VF+ +
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNK 95
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NV ++ A+IAG N A+ LY QM G+ PD+FTF +IRAC + ++H
Sbjct: 96 NVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIH 155
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ K + +AL+ Y KF + +A+ VF + +D+
Sbjct: 156 GLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVL--------------- 200
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
WN ++ G A EA+ +F MG ++P TV +L +
Sbjct: 201 -------------WNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMG 247
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------------- 352
G +H ++ K G+ S V V NA++
Sbjct: 248 DFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMS 307
Query: 353 -QHQAGELF---RLFSLML-ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+ G+ + RLF M+ +S+ +PD +T V+ AC +A+L G ++H Y++ GLA
Sbjct: 308 VHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLA 367
Query: 408 L--------DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
DV + N LMDMY KCG++ AR +F M + DV SW+ +I GY G G E
Sbjct: 368 KEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGE 427
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL +F RM + + PN ++ VG+L+ACSH G+V+EGL M+++YG+ P+ E +CV+
Sbjct: 428 ALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVI 487
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
D+L RAG++ EA D + M F D V W+SLLA+C+ H + D+ + AA +++++P +
Sbjct: 488 DMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCG 547
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ N+Y G++EEV +MK++ V+K PG SWIE+ +H
Sbjct: 548 NYVLMSNVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVH 593
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 45/340 (13%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+ EAL F + N R T ++S S + GR VH + + V+ N
Sbjct: 214 FEEALGVFRRMGGNGVVPCR-YTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSN 272
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LM 178
+++MYGKC + DA VF+ M + ++ SW ++++ + G + L+ +M+ S +
Sbjct: 273 ALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQ 332
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIK---SEHGSH-----LISQNALIAMYTKFD 230
PD T +++ AC+ L + GR++H +++ ++ SH ++ NAL+ MY K
Sbjct: 333 PDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCG 392
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ DA VF ++ KD+ SW MI G+ +
Sbjct: 393 NMRDARMVFVNMREKDVASWNIMITGYGMHGY---------------------------- 424
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP---- 346
EA+ +FS M +++P+ ++ LL AC+ + +G+ S + K Y P
Sbjct: 425 GGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESK--YGVSPSIEH 482
Query: 347 -VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
C + +AG+L + L+L K D + + ++ AC
Sbjct: 483 YTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAAC 522
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 320/649 (49%), Gaps = 80/649 (12%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
C L A ++ D R +I F+ L S + Y +A+ F N ++ TY
Sbjct: 95 CRELGFARQLFDRMPER--NIISFNSLISGYTQMGFYEQAMELF-LEAREANLKLDKFTY 151
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A + C L LG +H ++ + L N +++MY KCG L+ A +FD +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL---- 199
R+ VSW ++I+G + G + L +M + GL + GS+++AC C+ L
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC----CINLNEGF 267
Query: 200 ---GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G +H + K ++ + AL+ MY K + +A +FS + K++ ++ +MI G
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F ++D E + AS +EA LF +M R L P T +
Sbjct: 328 FLQMD---------EITDEAS--------------SEAFKLFMDMQRRGLEPSPSTFSVV 364
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L AC++ +L G QIH+ I K F S+ + +A+++
Sbjct: 365 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI 424
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
Q F LF + +S +P+ T + +M ACA A+L G Q+ Y
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGY 484
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K+G+ V + MY K G++ A ++F +++PDV ++S++I AQ G EA
Sbjct: 485 AIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L +F M++ G++PN +GVL AC H GLV +GL+ ++ M+N+Y I P + +C+VD
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R GR+ +AE+ I F D V W++LL+SC+ + + +GKR AE +++++P S +
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 664
Query: 581 LVLLCNIYASSG---KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIY SG EEV L M++RGV+K P SWI I + H+
Sbjct: 665 YVLLHNIYNDSGVNSSAEEVREL---MRDRGVKKEPALSWIVIGNQTHS 710
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 249/530 (46%), Gaps = 24/530 (4%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
N + Y L + S+ LG+ H H++ S P L N++LNMY KC L A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R +FD MP+RN++S+ ++I+G +Q G A+EL+++ ++ L D+FT+ + C
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
C + LG LH V+ + + N LI MY+K ++ A ++F +D SW S+I
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 255 DGFSKLDFARTVFNEM-----ESPNLASWNTIIAGVASCSNANE-----AMSLFSEMGDR 304
G+ ++ A N + + NL ++ A C N NE M++
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------HQAGE 358
+ D + +LL SL + +++ S + K + + + LQ + E
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
F+LF M +P TF+ V+ AC+A +LE G Q+H I K D F+ + L++
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
+Y GS + F D+ SW+S+I + Q E A LFR++ SS +RP T
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 479 LVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+ +++AC+ + G Q+ Y I + GI ++ + + A++G + A
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAI---KSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLL 584
++ + D+ + ++++S HG+ + E++ I P A L +L
Sbjct: 519 EVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 124/243 (51%), Gaps = 22/243 (9%)
Query: 339 KGFYSNVPVCN--AILQHQAGELFR-LFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
K F++N+ + ++ + G +R L SL T D + + A S+ +G
Sbjct: 8 KTFFNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGK 67
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H +++K+ L ++++N L++MY KC LG AR+LF+ M + +++S++SLI GY Q G
Sbjct: 68 LAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMG 127
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH-----VGLVEEGLQLYRIMQNEYGIIP 510
E+A++LF R + ++ + T G L C +G + GL + + + +I
Sbjct: 128 FYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLI- 186
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+ ++D+ ++ G++ +A ++ + D V W SL++ G V VG AAE
Sbjct: 187 -----NVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS-----GYVRVG--AAEEP 233
Query: 571 LKI 573
L +
Sbjct: 234 LNL 236
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 182/590 (30%), Positives = 305/590 (51%), Gaps = 50/590 (8%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS--LEDARMVFDE 140
+ +L++ C + SL +++H I+ S + ++ S L A +F
Sbjct: 28 HLNLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHS 84
Query: 141 MPQR--NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+ + N+ W +I S +++ L+ QML SGL P+ TF S+ ++C+
Sbjct: 85 IHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATH 144
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF- 257
+QLHAH +K H +LI MY++ + A VF +D S+ ++I G+
Sbjct: 145 EAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYV 204
Query: 258 --SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+D AR +F+E+ + ++ SWN +IAG EA++ F+ M + ++ P+ T+ S
Sbjct: 205 SEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVS 264
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL-------------- 359
+L AC SL G I S++ +GF N+ + NA++ + GE+
Sbjct: 265 VLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKD 324
Query: 360 --------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
LF +ML P+ +TF V+ ACA++ +L++G +H
Sbjct: 325 VILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHA 384
Query: 400 YIMK----TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
YI K TG +V + ++ MY KCG + A ++F M + SW+++I G A G
Sbjct: 385 YIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNG 444
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
E AL LF M + G +P+ +T VGVL+AC+ G VE G + + M +YGI P +
Sbjct: 445 HAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHY 504
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLLAR+G+ EA+ + M + D +W SLL +C+ HG V+ G+ AE + +++P
Sbjct: 505 GCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEP 564
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NS A VLL NIYA +G+W++VA++ + ++G++KVPG + IEI +H
Sbjct: 565 ENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVH 614
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 185/452 (40%), Gaps = 106/452 (23%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV---- 137
T+ L +C+ ++ +++H H L +H +++MY + G L AR+V
Sbjct: 129 TFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKS 188
Query: 138 ---------------------------FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
FDE+P ++VVSW AMIAG Q+G+ A+ +
Sbjct: 189 TLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFT 248
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M ++ + P+Q T S++ AC L + LG+ + + V G +L NAL+ MY+K
Sbjct: 249 RMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCG 308
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
I A +F + KD+ W +MI G+ L
Sbjct: 309 EIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYE-------------------------- 342
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK----GFYSNVP 346
EA+ LF M + P+ +T ++L AC S +L G +H+YI K G +NV
Sbjct: 343 --EALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400
Query: 347 VCNAIL--------QHQAGELFR----------------------------LFSLMLASQ 370
+ +I+ A ++FR LF M+
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEG 460
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSA 429
+PD ITF V+ AC +E+G + + K G++ + ++D+ + G A
Sbjct: 461 FQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEA 520
Query: 430 RELFNFME-DPDVVSWSSL-----IVGYAQFG 455
+ L ME +PD W SL I G +FG
Sbjct: 521 KVLMGNMEMEPDGAIWGSLLNACRIHGQVEFG 552
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 165/375 (44%), Gaps = 46/375 (12%)
Query: 35 VDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
VD R FD+I D+ S + + EAL F +Q + ST ++S
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQE-ADVSPNQSTMVSVLS 267
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC LRSL+LG+ + + + L N +++MY KCG + AR +FD M ++V+
Sbjct: 268 ACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVIL 327
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W MI G A+ L+ ML+ + P+ TF +++ AC+ L + LG+ +HA++
Sbjct: 328 WNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYID 387
Query: 209 KSEHGSHLISQ----NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
K+ G+ ++ ++I MY K + A VF S+ + + SW
Sbjct: 388 KNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASW-------------- 433
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
N +I+G+A +A A+ LF EM + PD +T +L ACT
Sbjct: 434 --------------NAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAG 479
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ G + S + K Y P C L ++G+ LM + +PD +
Sbjct: 480 FVELGHRYFSSMNKD--YGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWG 537
Query: 380 DVMGACAAMASLEMG 394
++ AC +E G
Sbjct: 538 SLLNACRIHGQVEFG 552
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 193/636 (30%), Positives = 320/636 (50%), Gaps = 80/636 (12%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISAC 90
+V D R W L S + ++ +E L F +QN +P+ T+A +
Sbjct: 149 KVFDEMKERNVVTWT-TLISGYARNSMNDEVLTLFMRMQNEGT---QPNSFTFAAALGVL 204
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
+ G +VH ++ + + N ++N+Y KCG++ AR++FD+ ++VV+W
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWN 264
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
+MI+G + NG + A+ ++ M + + + +F S+I+ C+ L + QLH V+K
Sbjct: 265 SMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKY 324
Query: 211 EHGSHLISQN---ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
L QN AL+ Y+K +LDA +F K+I G
Sbjct: 325 ---GFLFDQNIRTALMVAYSKCTAMLDALRLF-----KEIGCVG---------------- 360
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
N+ SW +I+G EA+ LFSEM + + P+ T +L A L +
Sbjct: 361 ------NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVI 410
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------------- 360
++H+ ++K + + V A+L +A ++F
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 361 ---------RLFSLMLASQTKPDHITFNDVMGACAAM-ASLEMGTQLHCYIMKTGLALDV 410
++F + KP+ TF+ ++ CAA AS+ G Q H + +K+ L +
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V + L+ MY K G++ SA E+F + D+VSW+S+I GYAQ G +AL +F+ M+
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
V+ + VT +GV AC+H GLVEEG + + IM + I PT+E SC+VDL +RAG++ +
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A I M +W+++LA+C+ H ++G+ AAE I+ + P +SAA VLL N+YA
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
SG W+E A++ M ER V+K PG SWIE++ K ++
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 247/529 (46%), Gaps = 38/529 (7%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S ++ ++ ++L GR++H + D + +++ Y K + +D R VFDE
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M +RNVV+WT +I+G ++N + + L+++M G P+ FTF + + + G G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
Q+H V+K+ + N+LI +Y K + A +F K + +W SMI G++
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 260 -LDF-ARTVFNEMESPNLASWNTIIAGVAS-CSNANEAMSLFSEMGDRELIPDGL----T 312
LD A +F M + + A V C+N E F+E ++ G
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR--FTEQLHCSVVKYGFLFDQN 331
Query: 313 VRS-LLCACTSPLSLYQGMQIHSYIIKKGFYSNV----PVCNAILQHQAG-ELFRLFSLM 366
+R+ L+ A + ++ +++ I G NV + + LQ+ E LFS M
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+P+ T++ ++ A ++ +++H ++KT V L+D YVK G +
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A ++F+ ++D D+V+WS+++ GYAQ G E A+K+F + G++PN T +L C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 487 SHVGL-VEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVHEAEDFINQMAFD 541
+ + +G Q + + I + CV + + A+ G + AE+ + +
Sbjct: 505 AATNASMGQGKQFH-----GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-E 558
Query: 542 DDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCN 586
D+V W S+++ HG +DV K + +K+D + C
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT 607
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 196/468 (41%), Gaps = 71/468 (15%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
L +A +FD+ P R+ S+ +++ G S++G+ A L++ + + G+ D F S+++
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
+ LC GRQLH IK + +L+ Y K D VF + +++ +W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
++I G +AR N+ E ++LF M + P+
Sbjct: 163 TTLISG-----YARNSMND-----------------------EVLTLFMRMQNEGTQPNS 194
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR- 361
T + L +G+Q+H+ ++K G +PV N+++ +A LF
Sbjct: 195 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 362 ---------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+F M + + +F V+ CA + L
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQ 453
QLHC ++K G D + LM Y KC ++ A LF + +VVSW+++I G+ Q
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQ 374
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
EEA+ LF M+ GVRPN T +LTA + E Q+ + + T
Sbjct: 375 NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT-- 432
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
++D + G+V EA + + D DIV W ++LA G +
Sbjct: 433 ---ALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE 476
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/577 (29%), Positives = 304/577 (52%), Gaps = 69/577 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L++AC+ L++L+ GR++H+H++ + + D L +L MY KCGSL+DA+ VF+ M ++
Sbjct: 16 LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 75
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+ +W+++I+ ++ G+ A+ LY +M+ G+ P+ TF + C+ + + GR +H
Sbjct: 76 LFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 135
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++ S+ + Q++L+ MY K D +++A R
Sbjct: 136 RILASKVPQDDVLQDSLLNMYLKCDEMVEA----------------------------RK 167
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPL 324
VF M++ N+ S+ +I+ EA+ LFS M E I P+ T ++L A
Sbjct: 168 VFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 227
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------------- 352
+L +G ++H ++ +GF +NV V NA++
Sbjct: 228 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIA 287
Query: 353 ---QH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
QH E LF M +P ++F+ + ACA + +L+ G ++H +++ LA
Sbjct: 288 AYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLA- 343
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ L+ MY +CGSL AR +FN M+ D S +++I + Q G ++AL+++RRM
Sbjct: 344 SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRME 403
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G+ + +T V VL ACSH LV + ++ + ++G++P E C+VD+L R+GR+
Sbjct: 404 QEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRL 463
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
+AE+ + M + D V W +LL+ CK HG+++ G+RAA + ++ P + V L N+Y
Sbjct: 464 GDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMY 523
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A++ ++++ R+ M+ERGV S+IEI ++H
Sbjct: 524 AAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELH 560
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 199/397 (50%), Gaps = 15/397 (3%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + G++ D+F S++ AC+ L + GR+LH H+I + + + + AL+ MY K
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSK-------LDFARTVFNEMESPNLASWNTIIAG 284
+ DA VF + KD+ +W S+I +++ + R + E PN+ ++ + G
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
AS + + ++ + ++ D + SLL + + ++ + + S
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 345 VPVCNAILQH-QAGELFRLFSLMLASQT-KPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+ +A +Q + E LFS M + +P+ TF ++GA + +LE G ++H ++
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
G +V V N L+ MY KCGS AR++F+ M +V+SW+S+I YAQ G +EAL
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF+RM V P+ V+ L AC+ +G ++EG +++ + + P E + ++ +
Sbjct: 301 LFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
AR G + +A N+M D +++A+ HG
Sbjct: 356 ARCGSLDDARRVFNRMK-TRDAFSCNAMIAAFTQHGR 391
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 175/401 (43%), Gaps = 44/401 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S+ + + EAL F + T+A ++ A L +L+ GRKVH H+ S
Sbjct: 183 MISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASR 242
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ V+ N ++ MYGKCGS +AR VFD M RNV+SWT+MIA +Q+G A+ L+
Sbjct: 243 GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLF 302
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS---QNALIAMY 226
+M + P +F S + AC+ L + GR++H V++ +HL S + +L++MY
Sbjct: 303 KRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVE----AHLASPQMETSLLSMY 355
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
+ + DA VF N M++ + S N +IA
Sbjct: 356 ARCGSLDDARRVF----------------------------NRMKTRDAFSCNAMIAAFT 387
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ--IHSYIIKKGFYSN 344
+A+ ++ M + DG+T S+L AC S SL + S ++ G
Sbjct: 388 QHGRKKQALRIYRRMEQEGIPADGITFVSVLVAC-SHTSLVADCRDFFQSLVMDHGVVPL 446
Query: 345 VP--VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
V +C + ++G L L+ + D + + ++ C L G + +
Sbjct: 447 VEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVF 506
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+ A + L +MY AR + ME+ V +
Sbjct: 507 ELAPA-ETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTT 546
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 200/639 (31%), Positives = 313/639 (48%), Gaps = 69/639 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C + A +V D +R W L + +Y EAL + + I T +
Sbjct: 15 CKSPEDARQVFDRIKQRNAFSWSI-LVECYVQNAMYQEALEVYKEMVRK-EISIDAYTLS 72
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM-PQ 143
+++AC+ L ++ GR V + D V+ +++++ KCG LE+A VF M
Sbjct: 73 SVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAM 132
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
R+++S TAMI ++G+ + A++ Y +M GL PD FT+ +I+ ACS + G+ +
Sbjct: 133 RDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHI 192
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H H+++S+H ++ +NALI MY K GS+ D +
Sbjct: 193 HKHILESKHFGNISVRNALITMYAK---------------------CGSLKD-------S 224
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
+++F M+ ++ SWN +IA + +A SLF M PD T S+L AC SP
Sbjct: 225 KSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASP 284
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCN---------------------------------- 349
L G +H I +GF + + N
Sbjct: 285 KRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTML 344
Query: 350 -AILQHQAGE--LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
A Q G+ LF L+ ML PD TF+ V+ +CA++ +L G +H G
Sbjct: 345 AAYAQFDKGKDALF-LYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGF 403
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV + L++MY KCGSL A++ F+ + + DVVSWS++I AQ G EEAL+L
Sbjct: 404 EKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHL 463
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M G+ N VT VL ACSH G + EG+ + + ++GI E +DLL RAG
Sbjct: 464 MNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAG 523
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EAE ++ M F V +LL CK HG+V GK + I+ ++P N + VLL N
Sbjct: 524 WLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNN 583
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+YA++G+W++VA+L M+++GV++ G S IE + KI+
Sbjct: 584 MYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIY 622
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 230/488 (47%), Gaps = 73/488 (14%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D L N I+ MYGKC S EDAR VFD + QRN SW+ ++ QN A+E+Y +M+
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ + D +T S++ AC+ L V GR + + ++ +LI ++ K +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 234 DAWNVFSSI-ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+A +VF S+ A +DI S +MI + R N++
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGA-----YVRHGKNDL---------------------- 153
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
A+ + +M + L PD T ++L AC+SP L G IH +I++ + N+ V NA++
Sbjct: 154 -ALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALI 212
Query: 353 QHQA------------------------------------GELFRLFSLMLASQTKPDHI 376
A + F LF M PD
Sbjct: 213 TMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 272
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
TF+ ++GACA+ LE G LH I G D + N L+ M+ +CGSL SAR F +
Sbjct: 273 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSI 332
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
E ++ +W++++ YAQF G++AL L++ M G P+ T V+ +C+ +G + EG
Sbjct: 333 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 392
Query: 497 QLYRIMQN---EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
++ + E +I + +V++ A+ G + +A+ + ++ + D+V W +++A+
Sbjct: 393 FIHECSTSCGFEKDVILG----TALVNMYAKCGSLADAKKSFDGIS-NKDVVSWSAMIAA 447
Query: 554 CKTHGNVD 561
HG+ +
Sbjct: 448 SAQHGHAE 455
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 312/618 (50%), Gaps = 73/618 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS--ACSSLRSLQLGRKVHDHIL 107
L SL ++ + E L F + + +P + ++ AC LR + G +H +
Sbjct: 12 LLKSLSREKQWEEVLYHFSHMFRDEE---KPDNFTLPVALKACGELREVNYGEMIHGFVK 68
Query: 108 SS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
D + + ++ MY KCG + +A +FDE+ + ++V+W++M++G +NG A+
Sbjct: 69 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAV 128
Query: 167 ELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
E + +M + S + PD+ T +++ AC+ L LGR +H VI+ + L N+L+
Sbjct: 129 EFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNC 188
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
Y K +A N+F IA KD+ SW +T+IA
Sbjct: 189 YAKSRAFKEAVNLFKMIAEKDVISW----------------------------STVIACY 220
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A EA+ +F++M D P+ TV +L AC + L QG + H I+KG + V
Sbjct: 221 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 280
Query: 346 PVCNAILQ-----HQAGELFRLFS--------------------------------LMLA 368
V A++ E + +FS ++L
Sbjct: 281 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 340
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ T+PD I V+G+C+ + LE H Y++K G + F+ L+++Y +CGSLG+
Sbjct: 341 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 400
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACS 487
A ++FN + D V W+SLI GY G G +AL+ F M +SS V+PN VT + +L+ACS
Sbjct: 401 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 460
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GL+ EGL+++++M N+Y + P E + +VDLL R G + A + +M F +
Sbjct: 461 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 520
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL +C+ H N ++ + A+ + +++ ++ +L+ N+Y G+WE V +L S+K+R
Sbjct: 521 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQR 580
Query: 608 GVRKVPGQSWIEIQTKIH 625
G++K +S IEI+ K+H
Sbjct: 581 GIKKGLAESLIEIRRKVH 598
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 299/585 (51%), Gaps = 85/585 (14%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHIL-S 108
+ SSL + + + EAL+ + +L R T A ++ ACS L L++GR++H + L +
Sbjct: 505 VISSLSQNDRFEEALM-YVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRN 563
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
++ + +++MY C + R+VFD + +R V W A++AG ++N ++ A+ L
Sbjct: 564 GDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRL 623
Query: 169 YVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
+V+M+ +S P+ TF S++ AC +H +++K G QNAL+ MY+
Sbjct: 624 FVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYS 683
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
+ R+ + ++T+F M ++ SWNT+I G
Sbjct: 684 RMGRV----------------------------EISKTIFGRMNKRDIVSWNTMITGCIV 715
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
C ++A++L EM R QG + VP
Sbjct: 716 CGRYDDALNLLHEMQRR-----------------------QGEDGSDTFVDYEDDGGVPF 752
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
KP+ +T V+ CAA+A+L G ++H Y +K LA
Sbjct: 753 ------------------------KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLA 788
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+DV V + L+DMY KCG L A +F+ M +V++W+ LI+ Y G GEEAL+LFR M
Sbjct: 789 MDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIM 848
Query: 468 RSSG------VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+ G +RPN VT + + ACSH G+V+EGL L+ M+ +G+ P + +C+VDL
Sbjct: 849 TAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDL 908
Query: 522 LARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
L R+GRV EA + IN M + + + W SLL +C+ H +V+ G+ AA+++ ++P ++
Sbjct: 909 LGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASH 968
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ NIY+S+G W++ + MKE GVRK PG SWIE ++H
Sbjct: 969 YVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVH 1013
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 248/548 (45%), Gaps = 97/548 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDA--VLHNHILNMYGKCGSLEDARMVFD 139
+ ++ A +++ L LG+++H H+ P + + N ++NMYGKCG L AR VFD
Sbjct: 332 AFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFD 391
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL-CCVG 198
++P R+ VSW +MIA + + ++ L+ ML + P FT S+ ACS + V
Sbjct: 392 DIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVR 451
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG+Q+HA+ +++ + NAL+ MY + R+ DA +F KD+ SW ++I S
Sbjct: 452 LGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLS 510
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ D E + + I+ GV PDG+T+ S+L
Sbjct: 511 QND-------RFEEALMYVYLMIVDGVR---------------------PDGVTLASVLP 542
Query: 319 ACTSPLSLYQGMQIHSYIIKKG--------------FYSN------------------VP 346
AC+ L G +IH Y ++ G Y N V
Sbjct: 543 ACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVA 602
Query: 347 VCNAILQHQAGELF-----RLFSLMLA-SQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
V NA+L A F RLF M++ S+ P+ TF V+ AC +H Y
Sbjct: 603 VWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGY 662
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
I+K G D +V N LMDMY + G + ++ +F M D+VSW+++I G G ++A
Sbjct: 663 IVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDA 722
Query: 461 LKLFRRMR----------------SSGV--RPNHVTLVGVLTACSHVGLVEEGLQL--YR 500
L L M+ GV +PN VTL+ VL C+ + + +G ++ Y
Sbjct: 723 LNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYA 782
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+ Q + S +VD+ A+ G ++ A +QM +++ W L+ + HG
Sbjct: 783 VKQKLAMDVAV---GSALVDMYAKCGCLNLASRVFDQMPI-RNVITWNVLIMAYGMHGK- 837
Query: 561 DVGKRAAE 568
G+ A E
Sbjct: 838 --GEEALE 843
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 203/433 (46%), Gaps = 18/433 (4%)
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+R+ W ++ + + AI Y ML + PD F F ++++A + + + LG+Q
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351
Query: 203 LHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG---F 257
+HAHV K H S + N+L+ MY K + A VF I +D SW SMI F
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVA-SCSNANEAMSLFSEMGDRELIPDGL---TV 313
+ + + +F M S N+ + + VA +CS+ + L ++ L L T
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTN 471
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLF-SLMLASQTK 372
+L+ + + K S V +++ Q+ E ++ LM+ +
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLGSARE 431
PD +T V+ AC+ + L +G ++HCY ++ G L + FV L+DMY C R
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 591
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTACSHVG 490
+F+ + V W++L+ GYA+ ++AL+LF M S S PN T VL AC
Sbjct: 592 VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCK 651
Query: 491 LV--EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+ +EG+ Y I++ +G + ++ ++D+ +R GRV ++ +M DIV W
Sbjct: 652 VFSDKEGIHGY-IVKRGFG--KDKYVQNALMDMYSRMGRVEISKTIFGRMN-KRDIVSWN 707
Query: 549 SLLASCKTHGNVD 561
+++ C G D
Sbjct: 708 TMITGCIVCGRYD 720
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 180/418 (43%), Gaps = 69/418 (16%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
V D +RR +W+ L + + ++AL F + + + F +T+A ++ AC
Sbjct: 592 VFDGVVRRTVAVWN-ALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRC 650
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+ +H +I+ D + N +++MY + G +E ++ +F M +R++VSW MI
Sbjct: 651 KVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMI 710
Query: 154 AGCSQNGQENAAIELYVQMLQS------------------GLMPDQFTFGSIIRACSGLC 195
GC G+ + A+ L +M + P+ T +++ C+ L
Sbjct: 711 TGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALA 770
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G G+++HA+ +K + + +AL+ MY K
Sbjct: 771 ALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAK--------------------------- 803
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-----GDRELI-PD 309
L+ A VF++M N+ +WN +I EA+ LF M +RE+I P+
Sbjct: 804 -CGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPN 862
Query: 310 GLTVRSLLCACTSP------LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---ELF 360
+T ++ AC+ L L+ M+ + +G + C L ++G E +
Sbjct: 863 EVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHY---ACLVDLLGRSGRVKEAY 919
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMG--TQLHCYIMKTGLALDVFVMNGL 416
L + M ++ K D ++ ++GAC S+E G H ++++ +A +M+ +
Sbjct: 920 ELINTMPSNLNKVD--AWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNI 975
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 133/285 (46%), Gaps = 28/285 (9%)
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
F+ T ++ C++L +L G+++H + + K D + + +++MY KCG L A
Sbjct: 752 FKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLAS 811
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG------LMPDQFTFGSIIR 189
VFD+MP RNV++W +I +G+ A+EL+ M G + P++ T+ +I
Sbjct: 812 RVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFA 871
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFSSIAR--K 245
ACS V G L H +K+ HG + L+ + + R+ +A+ + +++
Sbjct: 872 ACSHSGMVDEGLHLF-HTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLN 930
Query: 246 DITSWGSMIDG---FSKLDFARTVFNEM--ESPNLASWNTIIAGVASCSNA-NEAMSL-- 297
+ +W S++ ++F + PN+AS +++ + S + ++A+ +
Sbjct: 931 KVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRK 990
Query: 298 -FSEMGDRE-----LIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
EMG R+ I G V L + S Q ++H Y+
Sbjct: 991 KMKEMGVRKEPGCSWIEHGDEVHKFL---SGDASHPQSKELHEYL 1032
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 182/591 (30%), Positives = 300/591 (50%), Gaps = 72/591 (12%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
TNF T+ L+ ACSSL++LQLGR +H H D + +L+MY KCG L
Sbjct: 106 TNF-----TFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQ 160
Query: 134 ARMVFDEMPQ--RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
A+ +F+ + R++V+W AMIA S + I QM Q+G+ P+ T SI+
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTI 220
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
+ G+ +HA+ I++ +++ Q AL+ MY K +
Sbjct: 221 GQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLF------------------ 262
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDG 310
+AR +FN + N W+ +I G + ++A++L+ +M L P
Sbjct: 263 ----------YARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTP 312
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------- 357
T+ ++L AC L +G ++H ++IK G + V N+++ A
Sbjct: 313 ATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDE 372
Query: 358 -----------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ +F M +S P T ++ AC+ +A+L+ G
Sbjct: 373 MIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG 432
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
T H Y + G D + N ++DMY KCG + +RE+F+ M++ D++SW+++I+GY
Sbjct: 433 TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIH 492
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G EAL LF+ +++ G++P+ VTL+ VL+ACSH GLV EG + M + I P
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAH 552
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
C+VDLLARAG + EA FI +M F ++ +W +LLA+C+TH N+++G++ ++ I +
Sbjct: 553 YICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLG 612
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
P + VL+ NIY+S G+W++ A + + G +K PG SW+EI IH
Sbjct: 613 PEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIH 663
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 222/472 (47%), Gaps = 79/472 (16%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
++ AR VFD++P+ +VV W MI + +G +I LY+ MLQ G+ P FTF +++A
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR--KDIT 248
CS L + LGR +H H L AL+ MY K + A +F+SI+ +DI
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+W +MI FS F+ + + + S ++M + P
Sbjct: 177 AWNAMIAAFS--------FHALHAQTIHS--------------------VAQMQQAGVTP 208
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------ 356
+ T+ S+L +L+QG IH+Y I+ F+ NV + A+L A
Sbjct: 209 NSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIF 268
Query: 357 ------------------------GELFRLFSLMLA-SQTKPDHITFNDVMGACAAMASL 391
+ L+ ML P T ++ ACA + L
Sbjct: 269 NTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDL 328
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+ G +LHC+++K+G+ LD V N L+ MY KCG + +A + M D VS+S++I G
Sbjct: 329 KRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGC 388
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE-----EGLQLYRIMQNEY 506
Q G E+AL +FR+M+SSG+ P T++ +L ACSH+ ++ G + R N+
Sbjct: 389 VQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDT 448
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
I + ++D+ ++ G++ + + ++M + DI+ W +++ HG
Sbjct: 449 SIC------NAIIDMYSKCGKITISREIFDRMQ-NRDIISWNTMIIGYGIHG 493
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 157/367 (42%), Gaps = 49/367 (13%)
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
R+ D+ + +AR I+ +++ AR VF+++ P++ WN +I A
Sbjct: 36 RVSDSDAAATQLARYHISR--------NEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGP 87
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
+++ L+ M + P T LL AC+S +L G IH++ G ++ V A
Sbjct: 88 FQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTA 147
Query: 351 ILQ--------HQAGELFRLFSLM------------------LASQT------------K 372
+L +QA LF S L +QT
Sbjct: 148 LLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVT 207
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ T ++ +L G +H Y ++ +V + L+DMY KC L AR++
Sbjct: 208 PNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKI 267
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTACSHVGL 491
FN + + V WS++I GY +AL L+ M G+ P TL +L AC+ +
Sbjct: 268 FNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTD 327
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
++ G +L+ M + T S ++ + A+ G + A F+++M D V + +++
Sbjct: 328 LKRGKKLHCHMIKSGMDLDTTVGNS-LISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAII 385
Query: 552 ASCKTHG 558
+ C +G
Sbjct: 386 SGCVQNG 392
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 112/228 (49%), Gaps = 7/228 (3%)
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
L+ ML P + TF ++ AC+++ +L++G +H + GL++D++V L+ MY
Sbjct: 94 LYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYA 153
Query: 422 KCGSLGSARELFNFM--EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
KCG L A+ LFN + +D D+V+W+++I ++ + + +M+ +GV PN TL
Sbjct: 154 KCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTL 213
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
V +L + +G ++ + ++ ++D+ A+ + A N +
Sbjct: 214 VSILPTIGQANALHQGKAIHAYYIRNF-FFDNVVLQTALLDMYAKCHLLFYARKIFNTVN 272
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI---DPTNSAALVLL 584
+D V W +++ H ++ +++L I +PT + +L
Sbjct: 273 KKND-VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATML 319
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 278/534 (52%), Gaps = 45/534 (8%)
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLED---ARMVFDEMPQRNVVSWTAMIAGC- 156
++H I+ + + + +L C S D AR VFDE+P + W MI
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80
Query: 157 -SQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
SQN QE ++ L+ QM +P D ++ +I+AC L G G++LH V+K GS
Sbjct: 81 NSQNPQE--SMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGS 138
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEME 271
L + ALI MY KF I A N+ +A D+ + ++ + + ++ A +F+ M
Sbjct: 139 DLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMP 198
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
+L SWNT+I G AS + A LF +R+LI + +S ++ Y +
Sbjct: 199 ERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLI-----------SWSSMIAAYAKAR 247
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
Q+ E RLF M + PD +T V+ AC + +L
Sbjct: 248 -----------------------QSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGAL 284
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
MG +H I + + +D+ + L+DMY KCG + ++ +FN M + DV +WS++I+G
Sbjct: 285 GMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGL 344
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G GE AL F +M S ++PN VT +GVL+ACSH+GLV+EG + M Y + P
Sbjct: 345 ANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPK 404
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E CVVD+L RAGR+ EA + I M F D +VW++LL +C+ + NV++ + A N+L
Sbjct: 405 IEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLL 464
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++P VLL NIY+ + +W++V + MK ++KVPG S IE+ +H
Sbjct: 465 ELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVH 518
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 164/419 (39%), Gaps = 98/419 (23%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHD 104
IW+ + + L QN E++ F +++ I + + +I AC L+ G+K+H
Sbjct: 71 IWNTMIRAYLNSQN-PQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHT 129
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMV--------------------------- 137
+L D + ++ MY K G +E AR +
Sbjct: 130 QVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINL 189
Query: 138 ----FDEMPQRNVVSWTAMIAGCSQNG-------------------------------QE 162
FD MP+R++VSW MI G + G Q
Sbjct: 190 AHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQS 249
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
N A+ L+ +M + ++PD+ T S++ AC + +G+G+ +H + ++ L +L
Sbjct: 250 NEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSL 309
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
+ MY K I ++ VF+ + +D+ +W +MI G + F
Sbjct: 310 VDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGEL----------------- 352
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
A+ FS+M ++ P+ +T +L AC+ + +G + + K Y
Sbjct: 353 -----------ALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSK--VY 399
Query: 343 SNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
P C + +AG L L+ + PD I + ++GAC ++E+ +
Sbjct: 400 DVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEE 458
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 72/299 (24%)
Query: 40 RRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
+ FD + DL S + K NEAL F +Q N T ++SAC +
Sbjct: 223 KLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQL-ANVLPDKVTMVSVLSACGDV 281
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+L +G+ +H+ I ++ + D L +++MY KCG ++++ VF+ M R+V +W+AMI
Sbjct: 282 GALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMI 341
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G + +G A++ + +M+ + P+ TF ++ ACS + V G
Sbjct: 342 MGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEG------------- 388
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
W F+S+++ V++ SP
Sbjct: 389 ----------------------WTYFTSMSK---------------------VYD--VSP 403
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
+ + ++ + EAM L M PD + R+LL AC +Y+ ++I
Sbjct: 404 KIEHYGCVVDILGRAGRLQEAMELIKSM---PFAPDAIVWRALLGAC----RIYKNVEI 455
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS---LGSARELFNFME 437
VM L Q+H I+KT L + FV+ L+ C S L AR +F+ +
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP-NHVTLVGVLTACSHVGLVEEGL 496
PD W+++I Y +E++ LF +MR P + +L V+ AC + G
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+L+ + + G+ + ++++ A+ G + A + +++MA D+V + LLA
Sbjct: 126 KLHTQVL-KIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAH-PDLVPYNVLLAEYVR 183
Query: 557 HGNVDVG 563
G +++
Sbjct: 184 VGEINLA 190
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 305/584 (52%), Gaps = 73/584 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y LI+ ++ +SL + +H HIL S H +++ Y KC + +AR +FDEMP
Sbjct: 4 YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSFFGHK-LIDGYIKCSVITEARKLFDEMP 62
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R++V+W +MI+ G+ AIELY ML G++PD +TF +I +A S + G++
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 203 LH--AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
H A V+ E ++ ++ MY KF ++ DA VF + KD+ + ++I G+++
Sbjct: 123 AHGLAVVLGFEVSDGFVA-TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQR 181
Query: 260 -LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
LD EA+ +F +M + P+ T+ S+L
Sbjct: 182 GLD------------------------------GEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPV----------CN------------------- 349
+C + L G IH ++K G S V CN
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 350 ------AILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
++Q+ E+ +F M+ P+H TF+ ++ AC+++A LE G Q+H +
Sbjct: 272 WTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTV 331
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K G+ + +V L+ +Y KCG++ AR +F + + DVVS +++I YAQ G G EAL+
Sbjct: 332 KLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALE 391
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF RM+ G +PN VT + +L AC++ GLVEEG Q++ +++N + I TR+ +C++DLL
Sbjct: 392 LFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLL 451
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RA R EA I + + D++ W++LL +CK HG V++ ++ + +L P + +
Sbjct: 452 GRAKRFEEAAMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHI 510
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
LL NIYAS+GKW+ V + + ++ ++K P SW++I ++H
Sbjct: 511 LLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHT 554
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 171/371 (46%), Gaps = 51/371 (13%)
Query: 42 FDDIWDFD--LFSSLC----KQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSL 93
FD + D D LF++L ++ L EAL F ++ RI+P+ Y A ++ +C +L
Sbjct: 160 FDRVLDKDVVLFTALIVGYNQRGLDGEALEVF---EDMVGSRIKPNEYTLASVLVSCGNL 216
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
L G+ +H ++ S + +L MY KC +ED+ VF+ + + V+WT+ I
Sbjct: 217 GDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFI 276
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G QNG+E A+ ++ +M++ + P+ FTF SI+ ACS L + G Q+HA +K
Sbjct: 277 VGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVD 336
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ ALI +Y K + A +VF S+ D+ S +MI +++ F
Sbjct: 337 GNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGF----------- 385
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI- 332
+EA+ LF M P+ +T S+L AC + + +G QI
Sbjct: 386 -----------------GHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 333 ------HSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
HS + + Y+ C L +A + F ++++ PD I + ++ AC
Sbjct: 429 SLIRNNHSIELTRDHYT----CMIDLLGRA-KRFEEAAMLIEEGKNPDVIQWRTLLNACK 483
Query: 387 AMASLEMGTQL 397
+EM +
Sbjct: 484 IHGEVEMAEKF 494
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 293/582 (50%), Gaps = 66/582 (11%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDH 105
W+F + +S K+N AL + L+ +F + ++ AC + QLG+++H
Sbjct: 92 WNF-VITSYTKRNQPRNALNVYAQLRK-MDFEVDNFMAPSVLKACGQVSWTQLGKEIHGF 149
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+L D + N ++ MYG+C +E AR+VFD+M +R+VVSW+ MI S+N + + A
Sbjct: 150 VLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMA 209
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL--ISQNALI 223
+EL +M + P + S++ + + +G+ +HA+VI++ + H+ + AL+
Sbjct: 210 LELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALL 269
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MY K L AR +FN + + SW +IA
Sbjct: 270 DMYAKC----------------------------GHLGLARQLFNGLTQKTVVSWTAMIA 301
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G + EA +LF +R+++ T+ LS Y
Sbjct: 302 GCIRSNRLEEARALFDSTQNRDVM-----------IWTAMLSAYAQ-------------- 336
Query: 344 NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
N I Q F LF M S +P +T ++ CA +L++G +H YI K
Sbjct: 337 ----ANCIDQ-----AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK 387
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+ +D + L+DMY KCG + +A LF D+ W+++I G+A G GEEAL +
Sbjct: 388 ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDI 447
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M GV+PN +T +G+L ACSH GLV EG +L+ M + +G++P E C+VDLL
Sbjct: 448 FAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLG 507
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG + EA + I M + +VW +L+A+C+ H N +G+ AA +L+I+P N VL
Sbjct: 508 RAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVL 567
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ NIYA++ +W + A + +MK G++K PG S IE+ +H
Sbjct: 568 MSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVH 609
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 205/653 (31%), Positives = 340/653 (52%), Gaps = 80/653 (12%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
AF +LD+A ++ + R + + L L KQ+ EA+ F + +F +
Sbjct: 314 AFARHGMLDEAKDIFINLKER-NAVTLNGLIVGLVKQHCSEEAVGIF--MGTRDSFVVNT 370
Query: 81 STYADLISACSSLR----SLQLGRKVHDHILSSK-CQPDAVLHNHILNMYGKCGSLEDAR 135
T+ L+SA + L GR+VH HIL + L N ++NMY KCG+++ A
Sbjct: 371 DTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKAS 430
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VF + R+ VSW +I+ QNG A+ Y M Q + P F S + +C+ L
Sbjct: 431 RVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLR 490
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+Q+H +K NAL+ MY ++W +F+S+A DI S
Sbjct: 491 LLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVS------ 544
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIA-GVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
WN+I+ V+S + E++ +FS M L P+ +T
Sbjct: 545 ----------------------WNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFV 582
Query: 315 SLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL---FRLFS---- 364
+LL A SPLS+ + G Q+H+ ++K G + V NA++ ++G++ +LFS
Sbjct: 583 NLLSAL-SPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSG 641
Query: 365 ----------------------------LMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
LM+ S D TF+ V+ ACA++A+LE G +
Sbjct: 642 RRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGME 701
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H + +++ L DV V + L+DMY KCG + A ++FN M + SW+S+I GYA+ G
Sbjct: 702 MHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGL 761
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
GE+AL++F M+ +G P+HVT V VL+ACSH GLV+ GL + +M+ ++GI+P E S
Sbjct: 762 GEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMME-DHGILPHIEHYS 820
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN---VDVGKRAAENILKI 573
CV+DLL RAG++ + +++IN+M + ++W+++L +C+ + +D+GK A+ +L++
Sbjct: 821 CVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLEL 880
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+P N VL N YA++G+WE+ A+ +M ++K GQSW+ + +H
Sbjct: 881 EPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHT 933
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 227/494 (45%), Gaps = 62/494 (12%)
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
++H ++ D L NH++N+Y K L AR VFD M +RN VSWT +++G +G
Sbjct: 77 RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 161 QENAAIELYVQMLQSG---LMPDQFTFGSIIRAC--SGLCCVGLGRQLHAHVIKSEHGSH 215
+ A ++ ML G P FTFGS++RAC +G + Q+H V K+ + S+
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196
Query: 216 LISQNALIAMYTK--FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES- 272
NALI+MY L A VF + +D+ +W +++ ++K + + F +
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256
Query: 273 ----------PNLASWNTIIAG--VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
PN ++ ++I ++SCS+ + D + R L
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATSLSSCSSG---------------VLDQVFARVLKSGS 301
Query: 321 TSPLSLYQGMQIHSYIIKKG-------FYSNVPVCNAIL----------QHQAGELFRLF 363
+S LY G + S + G + N+ NA+ QH + E +F
Sbjct: 302 SS--DLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF 359
Query: 364 SLMLASQTKPDHITFNDVMGACAAMA----SLEMGTQLHCYIMKTGLA-LDVFVMNGLMD 418
+ + TF ++ A A + L G ++H +I++TGL L + + NGL++
Sbjct: 360 -MGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVN 418
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY KCG++ A +F + D VSW+++I Q G E A+ + MR + P++
Sbjct: 419 MYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFA 478
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ L++C+ + L+ G Q++ ++G+ + +V + G E+ + N M
Sbjct: 479 AISGLSSCASLRLLTAGQQVH-CDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSM 537
Query: 539 AFDDDIVVWKSLLA 552
A + DIV W S++
Sbjct: 538 A-EHDIVSWNSIMG 550
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
+LH ++K GL D+F+ N L+++Y K L +AR++F+ M + + VSW+ L+ GY G
Sbjct: 77 RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 456 CGEEALKLFRRMRSSG---VRPNHVTLVGVLTACSHVG--LVEEGLQLYRIMQNEYGIIP 510
+EA ++F+ M G RP T VL AC G L+ +Q++ ++ I
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSK---TIY 193
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDD----DIVVWKSLLASCKTHGNV 560
C L++ G Q FD D++ W +L++ G V
Sbjct: 194 ASNTTVCNA-LISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYV 246
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 287/549 (52%), Gaps = 31/549 (5%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+++ L A ++ +K+H I + L ++ Y CG R VFDE
Sbjct: 19 TSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDE 78
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M RNVV + MI N + + + ++ +M+ G PD +T+ +++ACS + G
Sbjct: 79 MSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG 138
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+H V+K +L N LIAMY K + +A
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEA------------------------- 173
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
R VF+EM ++ SWN+++AG A ++A+ + EM D PDG T+ SL+ A
Sbjct: 174 ---RRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAV 230
Query: 321 --TSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
TS ++ +I + +K S NV + + + L+ M + +PD IT
Sbjct: 231 ANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAIT 290
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F V+ AC +++L +G ++H Y+ K L ++ + N L+DMY +CG L A+ +F+ M+
Sbjct: 291 FASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMK 350
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DV SW+SLI Y G G A+ LF M +SG P+ + V +L+ACSH GL++EG
Sbjct: 351 FRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRI 410
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ M ++Y I P E +C+VDLL RAGRV EA + I QM + + VW +LL+SC+
Sbjct: 411 YFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVF 470
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N+D+G AA+N+L++ P S VLL NIYA +G+W+EV + MK + +RK PG S
Sbjct: 471 TNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISN 530
Query: 618 IEIQTKIHA 626
+E+ ++H
Sbjct: 531 VELNNQVHT 539
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 188/448 (41%), Gaps = 81/448 (18%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + Y++ L+ F + N FR TY ++ ACS +L+ G +H +L
Sbjct: 90 MIRSYVNNHRYDDGLLVFREMVNG-GFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKV 148
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N ++ MYGKCG L +AR VFDEM ++VVSW +M+AG + N + + A+E+
Sbjct: 149 GLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEIC 208
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M G PD T S++ A + T
Sbjct: 209 REMEDYGQKPDGCTMASLMPAVAN---------------------------------TSS 235
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ +L +F ++ RK++ SW MI + K N++
Sbjct: 236 ENVLYVEKIFVNLERKNLISWNVMIRVYMK-------------------NSL-------- 268
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+A+ L+ +M + PD +T S+L AC +L G +IH Y+ KK N+ + N
Sbjct: 269 -PTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLEN 327
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ------LHCYIMK 403
+++ +++ + ++ D + F DV + +++ M Q L ++
Sbjct: 328 SLI-----DMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLN 382
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-----PDVVSWSSLIVGYAQFGCGE 458
+G A D ++ G L R F M D P + ++ L+ + G +
Sbjct: 383 SGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVD 442
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTAC 486
EA + ++M + PN +L++C
Sbjct: 443 EAYNIIKQM---PIEPNERVWATLLSSC 467
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D R+ P T+A ++ AC L +L LGR++H+++ K P+ +L N +++
Sbjct: 272 AVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLID 331
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY +CG L+DA+ VFD M R+V SWT++I+ GQ A+ L+ +ML SG PD
Sbjct: 332 MYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIA 391
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA-LIAMYTKFDRILDAWNVFSSI 242
F +I+ ACS + GR + + I A L+ + + R+ +A+N+ +
Sbjct: 392 FVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQM 451
Query: 243 A-RKDITSWGSMIDG---FSKLDFA 263
+ W +++ F+ +D
Sbjct: 452 PIEPNERVWATLLSSCRVFTNMDIG 476
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 282/516 (54%), Gaps = 45/516 (8%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
P+AV +L K G + +AR +FD MP +NVVSW AMIA Q+ Q + A++L+ +M
Sbjct: 233 PNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKM 292
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
D ++ +II + + RQ++ + + + +Q AL++ + RI
Sbjct: 293 PHK----DSVSWTTIINGYIRVGKLDEARQVYNQMPCKD----ITAQTALMSGLIQNGRI 344
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCS 289
+A +FS I D+ W SMI G+S+ +D A +F +M N SWNT+I+G A
Sbjct: 345 DEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAG 404
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+ A +F M ++ ++ + SL+ GF N +
Sbjct: 405 QMDRATEIFQAMREKNIV----SWNSLIA---------------------GFLQNNLYLD 439
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
A+ + +M KPD TF + ACA +A+L++G QLH YI+K+G D
Sbjct: 440 AL---------KSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMND 490
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
+FV N L+ MY KCG + SA ++F +E D++SW+SLI GYA G +A K F +M S
Sbjct: 491 LFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSS 550
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
V P+ VT +G+L+ACSH GL +GL +++ M ++ I P E SC+VDLL R GR+
Sbjct: 551 ERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLE 610
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
EA + + M + +W SLL +C+ H N+++G+ AAE + +++P N++ + L N++A
Sbjct: 611 EAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHA 670
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+G+WEEV R+ M+ + K PG SWIE+Q +I
Sbjct: 671 EAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQ 706
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 130/549 (23%), Positives = 230/549 (41%), Gaps = 99/549 (18%)
Query: 96 LQLGR--KVHD--HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
+QLG+ KV + I + + V +N ++++ K + DAR +FD+M RN+VSW
Sbjct: 25 IQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNT 84
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMP--DQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
MIAG N A EL+ +MP D F++ +I C G+ A +
Sbjct: 85 MIAGYLHNNMVEEASELF------DVMPERDNFSWALMI-----TCYTRKGKLEKARELL 133
Query: 210 SEHGSHLISQ--NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFAR 264
L + NA+IA Y K + DA VF + KD+ S+ SM+ G++ K+ A
Sbjct: 134 ELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLAL 193
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
F M N+ SWN ++AG + + A LF ++ + P+ ++ ++LC
Sbjct: 194 QFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPN----PNAVSWVTMLCGLAKYG 249
Query: 325 SLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+ + ++ + K S N + + Q E +LF M D +++ ++
Sbjct: 250 KMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKM----PHKDSVSWTTIIN 305
Query: 384 ACAAMASLEMGTQLHCYI----------MKTGL-----------------ALDVFVMNGL 416
+ L+ Q++ + + +GL A DV N +
Sbjct: 306 GYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSM 365
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-------- 468
+ Y + G + A LF M + VSW+++I GYAQ G + A ++F+ MR
Sbjct: 366 IAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWN 425
Query: 469 -----------------------SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
G +P+ T L+AC+++ ++ G QL+ +
Sbjct: 426 SLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKS 485
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD----DIVVWKSLLASCKTHGNVD 561
G + + ++ + A+ GRV AE F D D++ W SL++ +G +
Sbjct: 486 -GYMNDLFVGNALIAMYAKCGRVQSAEQ-----VFRDIECVDLISWNSLISGYALNGYAN 539
Query: 562 VGKRAAENI 570
+A E +
Sbjct: 540 KAFKAFEQM 548
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 190/434 (43%), Gaps = 59/434 (13%)
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVF 267
E G H + N I K ++ +A +F ++ K++ ++ SMI +K + AR +F
Sbjct: 12 EAGKHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLF 71
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
++M NL SWNT+IAG + EA LF M +R D + ++ T L
Sbjct: 72 DQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPER----DNFSWALMITCYTRKGKLE 127
Query: 328 QGMQIHSYIIKKGFYS--NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+ ++ + K + N + + Q + ++F M A D +++N ++
Sbjct: 128 KARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAK----DLVSYNSMLAGY 183
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+ + Q ++ +V N ++ YVK G L SA +LF + +P+ VSW
Sbjct: 184 TQNGKMHLALQF----FESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWV 239
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGV---------------------------RPNHVT 478
+++ G A++G EA +LF RM S V + V+
Sbjct: 240 TMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVS 299
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE--RRSCVVDLLARAGRVHEAEDFIN 536
++ VG ++E Q+Y M P ++ ++ ++ L + GR+ EA+ +
Sbjct: 300 WTTIINGYIRVGKLDEARQVYNQM-------PCKDITAQTALMSGLIQNGRIDEADQMFS 352
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP-TNSAALVLLCNIYASSGKWE 595
++ D+V W S++A G +D A N+ + P NS + + + YA +G+ +
Sbjct: 353 RIG-AHDVVCWNSMIAGYSRSGRMD----EALNLFRQMPIKNSVSWNTMISGYAQAGQMD 407
Query: 596 EVARLMGSMKERGV 609
+ +M+E+ +
Sbjct: 408 RATEIFQAMREKNI 421
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 194/659 (29%), Positives = 320/659 (48%), Gaps = 112/659 (16%)
Query: 79 RPST--YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+P T + L+ CSS +++ GR+VH H+ + + ++ H++ MY +CGS+ +A+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + +++V +WT MI Q G + A+ ++ QM + +MP + T+ +I+ AC+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G ++H +++ + ALI MY K + AW+ F + +D+ SW +MI
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 257 FSKLD---FAR-------------------TVFNEMESPNLASWNTIIAGVASC------ 288
+ D AR TVFN PN S + G+ S
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 289 -----------SNA---NEAMSLFSEMGDRELIP-------------------------- 308
NA +A LF +M DR+++
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300
Query: 309 DG-----LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQ 355
DG +T +L TS SL +G IH + + G+ + V A++ Q
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ 360
Query: 356 AGELF----------------------------RLFSLMLASQTKPDHITFNDVMGACAA 387
A ++F +LF M +P T V+ CA
Sbjct: 361 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 420
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+A+L+ G Q+H +I++ +++ V L++MY KCG + A +F M D++ W+S+
Sbjct: 421 LAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSM 480
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
+ YAQ G +E L+LF +M+ GV+ + V+ V VL+A SH G V +G Q + M ++
Sbjct: 481 LGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFS 540
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAF-DDDIVVWKSLLASCKTHGNVDVGKRA 566
I PT E CVVDLL RAGR+ EA D + +++ D ++W +LL +C+TH D K A
Sbjct: 541 ITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAA 600
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
AE +L+ DP++S A V+L N+YA++G W+ V R+ M+ RGV+K PG+S IEI ++H
Sbjct: 601 AEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVH 659
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 288/555 (51%), Gaps = 72/555 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ ++ C ++ L +K+H HI+ + L ++++ G E A ++F +
Sbjct: 17 FVPILKDCPNIVEL---KKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVA 73
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQML-----QSGLMPDQFTFGSIIRACSGLCCV 197
N + AMI N AI +Y QML ++ + PD+FTF ++++C+GL C
Sbjct: 74 DPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCY 133
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG+Q+H HV K S+ + +N+L+ MY K D
Sbjct: 134 DLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCD--------------------------- 166
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
LD A VF EM + SWNT+I+G A ++F EM D+
Sbjct: 167 -SLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDK------------- 212
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
+++ I S + G Y++ A E FR ++ +PD I+
Sbjct: 213 -------TIFSWTAIVSGYARIGCYAD-----------ALEFFRRMQMV---GIEPDEIS 251
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
V+ CA + +LE+G +H Y K G ++ V N L++MY KCGS+ R LF+ M+
Sbjct: 252 LVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMK 311
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ DV+SWS++IVG A G EA++LF+ M+ + + P+ +T VG+LTAC+H GL+ EGL+
Sbjct: 312 ERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLR 371
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ M+ +Y I P E C+V+LL +GR+ +A + + +M D +W SLL+SC++H
Sbjct: 372 YFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSH 431
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
GN+ + A E++L+++P ++ VLL N+YA GKW+ V+R+ M+ + ++K PG S
Sbjct: 432 GNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSS 491
Query: 618 IEIQTKIH--ASGND 630
IE+ + ASG+D
Sbjct: 492 IEVDNMVQEFASGDD 506
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 151/350 (43%), Gaps = 66/350 (18%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +C+ L LG++VH H+ + + V+ N ++ MY KC SL+DA VF+EM
Sbjct: 119 TFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEM 178
Query: 142 PQRNVVSWTAMIAGCSQNGQENA-------------------------------AIELYV 170
+R+ VSW +I+G + GQ A+E +
Sbjct: 179 TERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFR 238
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M G+ PD+ + S++ C+ L + LG+ +H + K+ ++ NALI MY K
Sbjct: 239 RMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCG 298
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
I +F + +D+ SW +T+I G+A+
Sbjct: 299 SIDQGRRLFDQMKERDVISW----------------------------STMIVGLANHGR 330
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI-----HSYIIKKGFYSNV 345
A EA+ LF EM ++ P +T LL AC L +G++ Y I+ G
Sbjct: 331 AREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYG 390
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+ N L +G L + L+ KPD + ++ +C + +L++
Sbjct: 391 CLVN--LLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAV 438
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 291/576 (50%), Gaps = 95/576 (16%)
Query: 84 ADLISACSSLRSLQLGRKVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDA-------- 134
A L+ C +SL+ G+ +H H+ ++ +P+ +L NH++ MY KCG DA
Sbjct: 50 ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 135 -----------------------RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
R+VFD MP+R+VVSW M+ G +Q+G + A+ Y +
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
+SG+ ++F+F ++ AC + L RQ H V+ + S+++ ++I Y K
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC-- 227
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+++ A+ F+EM ++ W T+I+G A +
Sbjct: 228 --------------------------GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
A LF EM ++ +P+S + +
Sbjct: 262 EAAEKLFCEMPEK-----------------NPVSW-----------------TALIAGYV 287
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q LF M+A KP+ TF+ + A A++ASL G ++H Y+++T + +
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V++ L+DMY K GSL ++ +F +D D V W+++I AQ G G +AL++ M
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
V+PN TLV +L ACSH GLVEEGL+ + M ++GI+P +E +C++DLL RAG E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
I +M F+ D +W ++L C+ HGN ++GK+AA+ ++K+DP +SA +LL +IYA
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
GKWE V +L G MK+R V K SWIEI+ K+ A
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEA 563
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 178/404 (44%), Gaps = 63/404 (15%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
+L +A V DS R W+ + NL+ +F ++ F ++A L
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN--EFSFAGL 185
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD------- 139
++AC R LQL R+ H +L + + VL I++ Y KCG +E A+ FD
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 140 ------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
EMP++N VSWTA+IAG + G N A++L+ +M+
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ P+QFTF S + A + + + G+++H ++I++ + I ++LI MY+K + +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
VF + D D VF WNT+I+ +A ++A+
Sbjct: 366 ERVF------------RICD-----DKHDCVF----------WNTMISALAQHGLGHKAL 398
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ-IHSYIIKKGFYSNVP--VCNAIL 352
+ +M + P+ T+ +L AC+ + +G++ S ++ G + C L
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+AG L + +PD +N ++G C + E+G +
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKK 502
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 187/616 (30%), Positives = 306/616 (49%), Gaps = 71/616 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L +S K N +A + +++ T+ + ++ AC + S LG++VH ++ +
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRG-TDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKN 153
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
D + N ++ MY + GSL AR++FD++ ++VVSW+ MI ++G + A++L
Sbjct: 154 GFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLL 213
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS----EHGSHLISQNALIAM 225
M + P + SI + L + LG+ +HA+V+++ + G L + ALI M
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCT--ALIDM 271
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
Y K + L +AR VF+ + ++ SW +IA
Sbjct: 272 YVKCE----------------------------NLAYARRVFDGLSKASIISWTAMIAAY 303
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
C+N NE + LF +M + P+ +T+ SL+ C + +L G +H++ ++ GF ++
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363
Query: 346 PVCNAILQHQAG------------------------------------ELFRLFSLMLAS 369
+ A + E F +F M
Sbjct: 364 VLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC 423
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+P+ T ++ CA SLEMG +H YI K G+ D+ + +DMY CG + +A
Sbjct: 424 GIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTA 483
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
LF D D+ W+++I G+A G GE AL+LF M + GV PN +T +G L ACSH
Sbjct: 484 HRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHS 543
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
GL++EG +L+ M +E+G P E C+VDLL RAG + EA + I M +I V+ S
Sbjct: 544 GLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGS 603
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LA+CK H N+ +G+ AA+ L ++P S VL+ NIYAS+ +W +VA + +MK+ G+
Sbjct: 604 FLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGI 663
Query: 610 RKVPGQSWIEIQTKIH 625
K PG S IE+ +H
Sbjct: 664 VKEPGVSSIEVNGLLH 679
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/528 (24%), Positives = 219/528 (41%), Gaps = 73/528 (13%)
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
LH H + C + E N + +I +N A ++Y M +
Sbjct: 62 LHGHFIKTSSNCSY--RVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTD 119
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
D F S+++AC + LG+++H V+K+ + NALI MY++ + A
Sbjct: 120 TEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALAR 179
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+F I KD+ SW +MI + + +G+ +EA+
Sbjct: 180 LLFDKIENKDVVSWSTMIRSYDR-----------------------SGL-----LDEALD 211
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--YSNVPVCNAILQ- 353
L +M + P + + S+ L G +H+Y+++ G S VP+C A++
Sbjct: 212 LLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDM 271
Query: 354 -----------------------------------HQAGELFRLFSLMLASQTKPDHITF 378
+ E RLF ML P+ IT
Sbjct: 272 YVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITM 331
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++ C +LE+G LH + ++ G L + + +DMY KCG + SAR +F+ +
Sbjct: 332 LSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKS 391
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D++ WS++I YAQ C +EA +F M G+RPN T+V +L C+ G +E G +
Sbjct: 392 KDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWI 451
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + + GI ++ VD+ A G + A + A D DI +W ++++ HG
Sbjct: 452 HSYIDKQ-GIKGDMILKTSFVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMISGFAMHG 509
Query: 559 NVDVGKRAAENI--LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
+ + E + L + P N + + + SG +E RL M
Sbjct: 510 HGEAALELFEEMEALGVTP-NDITFIGALHACSHSGLLQEGKRLFHKM 556
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 195/645 (30%), Positives = 320/645 (49%), Gaps = 72/645 (11%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNE-ALVAFDFLQN------NTNF 76
L L + G +V + L F+ I + D+ S C N Y++ V + F+ N
Sbjct: 51 LVNLYAKCGSIVKAKLV-FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENT 109
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
T++ + +A SS G + H + + D + + ++NMY K G + DAR
Sbjct: 110 LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARK 169
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD +P+RN VSW +I+G + A EL+ M + D+F + S++ A +
Sbjct: 170 VFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDL 229
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V G+Q+H +K+ S NAL+ MY K + DA F KD +W +MI
Sbjct: 230 VHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMI-- 287
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
G A +++EA++LF M P T +
Sbjct: 288 --------------------------TGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGV 321
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
+ AC+ +L +G QIH Y +K G+ + A++
Sbjct: 322 INACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDI 381
Query: 354 ----------HQAGE---LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
Q GE L+ M + P +T V+ AC+++A+LE G Q+H
Sbjct: 382 VLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQ 441
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K G +L+V + + L MY KCGSL +F M D+++W+++I G +Q G G +A
Sbjct: 442 TIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKA 501
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L+LF +R +P++VT V VL+ACSH+GLVE G +R+M +E+GI+P E +C+VD
Sbjct: 502 LELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVD 561
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
+L+RAG++HE ++FI D + +W+ LL +C+ + N ++G A E ++++ S+A
Sbjct: 562 ILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSA 621
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+LL +IY + G+ ++V R+ MK RGV K PG SWIE+++++H
Sbjct: 622 YILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVH 666
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 242/515 (46%), Gaps = 68/515 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
++ DL+ C+ + LQ G+ +H +L + L N ++N+Y KCGS+ A++VF+ +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 142 PQRNVVSWTAMIAGCSQNGQENAA--IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
++VVSW +I G SQ G + +EL+ +M +P+ TF + A S
Sbjct: 72 TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFG 131
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q HA IK+ + + ++LI MY K +LDA VF +I ++ SW ++I G++
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA- 190
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
ME +W LF M E D S+L A
Sbjct: 191 ----------MERMAFEAWE-----------------LFXLMRREEGAHDKFIYTSVLSA 223
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------------- 353
T P ++ G QIH +K G S V NA++
Sbjct: 224 LTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITW 283
Query: 354 -------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
QAG E LF M + KP TF V+ AC+ + +LE G Q+H Y +K
Sbjct: 284 SAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLK 343
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
G ++ M L+DMY KCGSL AR+ F+++++PD+V W+S+I GYAQ G E AL L
Sbjct: 344 AGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTL 403
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
+ RM+ + P+ +T+ VL ACS + +E+G Q++ +YG S + + A
Sbjct: 404 YCRMQMERIMPHELTMASVLRACSSLAALEQGKQIH-AQTIKYGFSLEVPIGSALSTMYA 462
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + + +M DI+ W ++++ +G
Sbjct: 463 KCGSLEDGNLVFRRMP-SRDIMTWNAMISGLSQNG 496
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 181/424 (42%), Gaps = 76/424 (17%)
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
L P +F ++ C+ + G+ +HA ++++ S + N+L+ +Y K I+ A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA-- 294
VF SI KD+ S WN +I G + +
Sbjct: 66 LVFESITNKDVVS----------------------------WNCLINGYSQKGTVGYSFV 97
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK---------------- 338
M LF M +P+G T + A +S + G+Q H+ IK
Sbjct: 98 MELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINM 157
Query: 339 ----------KGFYSNVPVCNAI----------LQHQAGELFRLFSLMLASQTKPDHITF 378
+ + +P N + ++ A E + LF LM + D +
Sbjct: 158 YCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIY 217
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ A + G Q+HC +K GL V N L+ MY KCG L A + F D
Sbjct: 218 TSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGD 277
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D ++WS++I GYAQ G EAL LF M +G +P+ T VGV+ ACS +G +EEG Q+
Sbjct: 278 KDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQI 337
Query: 499 YRIMQNEYGIIPTRERR----SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
+ Y + E + + +VD+ A+ G + +A + + + DIV+W S+++
Sbjct: 338 H-----GYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLK-EPDIVLWTSMISGY 391
Query: 555 KTHG 558
+G
Sbjct: 392 AQNG 395
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 300/581 (51%), Gaps = 88/581 (15%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + L++AC+SL LQ G ++H ++ + D ++ +L++Y KCG +E A ++F+
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLG 305
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ NVV W ++ Q + EL+ QM +G+ P+QFT+ I+R C+ + LG
Sbjct: 306 NRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGE 365
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H+ +K+ S + LI MY+K+ + A V + KD+ SW SMI G+ + +
Sbjct: 366 QIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE 425
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+ + +A++ F EM + PD + + S + C
Sbjct: 426 YCK----------------------------DALAAFKEMQKCGIWPDNIGLASAISGCA 457
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------LQH-------- 354
++ QG+QIH+ + G+ +V + NA+ ++H
Sbjct: 458 GIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
Query: 355 ------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
Q+G E ++F M S K + TF + A A +A ++ G Q+H ++KTG
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ + V N L+ +Y KCGS A+ F+ M + + VSW+++I +Q G G EAL F
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFD 637
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ +EGL ++ M ++YGI P + +CV+D+ RA
Sbjct: 638 QMK------------------------KEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRA 673
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ A+ F+ +M D +VW++LL++CK H N++VG+ AA+++L+++P +SA+ VLL
Sbjct: 674 GQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLS 733
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N YA +GKW ++ M++RGVRK PG+SWIE++ +HA
Sbjct: 734 NAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHA 774
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 244/518 (47%), Gaps = 71/518 (13%)
Query: 80 PSTYADLISAC-SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
P +A + AC + R Q+ ++H ++ D ++ N ++++Y K G + AR VF
Sbjct: 41 PLDFACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVF 100
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+E+ R+ VSW AM++G +QNG A+ LY QM ++G++P + S++ +C+
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFA 160
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GR +HA K S NALI +Y + A VF + +D ++ ++I G
Sbjct: 161 QGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGH- 219
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
A C++ A+ +F EM L PD +T+ SLL
Sbjct: 220 ---------------------------AQCAHGEHALEIFEEMQSSGLSPDCVTISSLLA 252
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYS-------------------------------NVPV 347
AC S L +G Q+HSY+ K G S NV +
Sbjct: 253 ACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVL 312
Query: 348 CNAILQ-----HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
N IL + + F LF M + +P+ T+ ++ C +++G Q+H +
Sbjct: 313 WNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSV 372
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KTG D++V L+DMY K G L AR + +++ DVVSW+S+I GY Q ++AL
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALA 432
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY-GIIPTRERRSCVVD 520
F+ M+ G+ P+++ L ++ C+ + + +GLQ++ R+ + Y G + + +V+
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSI---WNALVN 489
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
L AR GR+ EA ++ D+I W L++ G
Sbjct: 490 LYARCGRIREAFSSFEEIEHKDEI-TWNGLVSGFAQSG 526
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 296/585 (50%), Gaps = 99/585 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILS---SKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T +++S+C+++ + +GRKVH ++ S C P A N +L MYGKCG E AR VF
Sbjct: 349 TLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVA---NSVLYMYGKCGDAETARAVF 405
Query: 139 DEMP-------------------------------QRNVVSWTAMIAGCSQNGQENAAIE 167
+ M +R++VSW +IAG +QNG + A++
Sbjct: 406 ERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALK 465
Query: 168 LYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ +ML + M PD FT S++ AC+ L + +G+Q+H++++++ NALI+ Y
Sbjct: 466 FFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTY 525
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
K + A + D+ N+ S+ ++ G
Sbjct: 526 AKSGSVETARRIMDQAVVADL--------------------------NVISFTALLEGYV 559
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+ +A +F M +R++I + M + G++ N
Sbjct: 560 KLGDTKQAREIFDIMNNRDVIA------------------WTAMIV-------GYHQN-- 592
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
Q E LF M+ +P+ T V+ ACA++A L+ G Q+HC +++
Sbjct: 593 -------GQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQ 645
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
V V N ++ +Y + GS+ AR +F+ + + ++W+S+IV AQ G GE+A+ LF
Sbjct: 646 EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFE 705
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M GV+P+H+T VGVL+AC+H G V++G + Y MQNE+GI+P +C+VDL ARA
Sbjct: 706 EMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARA 765
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G + EA +FI +M D VVW SLLA+C+ N D+ + AA +L IDP NS A L
Sbjct: 766 GLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALA 825
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
N+Y++ G+W + AR+ K++GV+K G SW ++ K+H G D
Sbjct: 826 NVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGAD 870
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 232/455 (50%), Gaps = 49/455 (10%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+A N +L++Y K G L DA +VF EMP R+ VSWT MI G +++G+ A++ ++ M+
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
G P QFT +++ +C+ + G+GR++H V+K S + N+++ MY K
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399
Query: 234 DAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
A VF + + ++SW M+ ++ +++ A ++F M ++ SWNTIIAG
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459
Query: 291 ANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
A+ FS M + PD TV S+L AC + L G Q+HSYI++ G + + N
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
A++ A S+E + IM + D
Sbjct: 520 ALIS------------------------------TYAKSGSVETARR----IMDQAVVAD 545
Query: 410 VFVMN--GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+ V++ L++ YVK G ARE+F+ M + DV++W+++IVGY Q G +EA++LFR M
Sbjct: 546 LNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSM 605
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGIIPTRERRSCVVDLLA 523
G PN TL VL+AC+ + ++ G Q++ R +Q + + + ++ + A
Sbjct: 606 ILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVS-----NAIITVYA 660
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
R+G V A +Q+ + + + W S++ + HG
Sbjct: 661 RSGSVPLARRVFDQICWRKETITWTSMIVAMAQHG 695
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 191/437 (43%), Gaps = 59/437 (13%)
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ---NALIAMYTKFDR----ILDAW 236
+ +++ C GR +HAH +K+ L+S N L+A Y +A
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKA---GLLVSTYLCNNLLAYYASVGVSRGCFREAR 268
Query: 237 NVFSSI--ARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+F I AR++ +W S++ ++K L A VF EM + SW +I G+
Sbjct: 269 CLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRF 328
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
+A+ F +M P T+ ++L +C + + G ++H +++K G S VPV N++
Sbjct: 329 WDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSV 388
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
L + G C + + + V
Sbjct: 389 LY---------------------------MYGKCGDAETARA-------VFERMQVRSVS 414
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-S 470
N ++ +Y G + A +F M + +VSW+++I GY Q G ALK F RM S S
Sbjct: 415 SWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSAS 474
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
+ P+ T+ VL+AC+++ +++ G Q++ + G+ + + + ++ A++G V
Sbjct: 475 SMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRT-GMPCSSQIMNALISTYAKSGSVET 533
Query: 531 AEDFINQMAFDD-DIVVWKSLLASCKTHGNVDVG--KRAAENILKIDPTNSAALVLLCNI 587
A ++Q D +++ + +LL G V +G K+A E ++ + A +
Sbjct: 534 ARRIMDQAVVADLNVISFTALL-----EGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVG 588
Query: 588 YASSGKWEEVARLMGSM 604
Y +G+ +E L SM
Sbjct: 589 YHQNGQNDEAMELFRSM 605
>gi|147844170|emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
Length = 730
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 288/585 (49%), Gaps = 107/585 (18%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RI + L C + +L+ G +H +L + Q D + NH+LNMY KCG AR
Sbjct: 7 RIWKTLKKILCYGCDIVNALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQ 66
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFDEM ++N+VSW+AMI+G Q G+ AI+LY QM L+P+++ F S+I AC+ L
Sbjct: 67 VFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSA 123
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G+++H+ +K + S N+LI+MY K ++ DA +VF++
Sbjct: 124 LTQGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPE------------ 171
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
PN S+N +I G F M + LIPD +
Sbjct: 172 ----------------PNCVSYNALITGFVENQQLERGFEFFKLMXQQGLIPDRFAFMGV 215
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGELFRLF----- 363
L CT+ +L +G ++H +K S + N I L +A + FRL
Sbjct: 216 LGICTTTENLKRGTELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDV 275
Query: 364 ----SLMLA--------------------SQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+L+ A + +PD TF + ACA +AS+ G Q+H
Sbjct: 276 ISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHA 335
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
++M+T L D+ V N L++MY KCG +G A ++F+ M ++VSW+++I G+ G GE
Sbjct: 336 HLMRTSLYRDLGVDNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGER 395
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
A++LF +M + G+RP+ VT +G+LTAC+H GL
Sbjct: 396 AVELFEQMNAIGIRPDSVTFIGLLTACNHAGL---------------------------- 427
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
AE+++ + F +D VV SLL++ + HG+V +G+R A+ +LK+ P ++
Sbjct: 428 -----------AEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTS 476
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
VLL N+YAS G W+ VA +K G++K PG S IE+ +
Sbjct: 477 PYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSV 521
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 187/418 (44%), Gaps = 47/418 (11%)
Query: 37 SFLRR-FDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSL 93
+F R+ FD++++ +L S + Y++A + + + P+ Y A +ISAC+SL
Sbjct: 62 TFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASL 121
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+L G+K+H L + + + N +++MY KC DA VF P+ N VS+ A+I
Sbjct: 122 SALTQGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALI 181
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G +N Q E + M Q GL+PD+F F ++ C+ + G +LH +K
Sbjct: 182 TGFVENQQLERGFEFFKLMXQQGLIPDRFAFMGVLGICTTTENLKRGTELHCQTVKLNLD 241
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
S N +I MY++ + I +A F I KD+
Sbjct: 242 STPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVI------------------------- 276
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPLSLYQGMQI 332
SWNT+IA + C + + + +F M + + PD T S L AC S+ G QI
Sbjct: 277 ---SWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 333
Query: 333 HSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMGACAA 387
H+++++ Y ++ V NA++ A G + +FS M+ + +++N ++
Sbjct: 334 HAHLMRTSLYRDLGVDNALVNMYAKCGCIGYAYDIFSKMV----HHNLVSWNTIIAGFGN 389
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL---FNFMEDPDVV 442
E +L + G+ D GL+ C G A E F F DP V+
Sbjct: 390 HGLGERAVELFEQMNAIGIRPDSVTFIGLL---TACNHAGLAEEYMRKFPFWNDPVVL 444
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 199/622 (31%), Positives = 309/622 (49%), Gaps = 76/622 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + + ++ ++ FD ++ T A ++ACS +L G+ +H IL
Sbjct: 131 LISGYVQMSNLDKVMILFD-KARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVY 189
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
VL N +++MY KCG ++ AR++FD + + VSW ++IAG QNG+ + +
Sbjct: 190 GLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTIL 249
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLC--CVGLGRQLHAHVIKSEHGSHL--ISQNALIAM 225
+M Q+GL + +T GS ++ACS C G LH H IK G HL + AL+ M
Sbjct: 250 QKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL--GLHLDVVVGTALLDM 307
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
Y K GS LD A +F++M N+ +N ++AG+
Sbjct: 308 YAK---------------------TGS-------LDDAIQIFDQMVDKNVVMYNAMMAGL 339
Query: 286 ASCSN-----ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
A +A++LF EM + P T SLL AC Q+H+ + K G
Sbjct: 340 LQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNG 399
Query: 341 FYSN--------------------------------VPVCNAILQH-QAGEL---FRLFS 364
S+ VP+ I + Q GE LF
Sbjct: 400 LLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFY 459
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
+L + KPD + +M +CA M L G Q+ + K G++ N + MY K G
Sbjct: 460 ELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSG 519
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
L +A F ME+PD+VSWS++I AQ G EAL+ F M+S G+ PNH +GVL
Sbjct: 520 DLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLI 579
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
ACSH GLVEEGL+ + M+ +Y + + CVVDLL RAGR+ +AE I ++ F+ +
Sbjct: 580 ACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEP 639
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
V+W++LL++C+ H + +R A+ +++++P SA+ VLL NIY +G +++ M
Sbjct: 640 VMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLM 699
Query: 605 KERGVRKVPGQSWIEIQTKIHA 626
+ER ++K PG SWI+I K+++
Sbjct: 700 EERRIKKEPGLSWIQIGDKVYS 721
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 265/557 (47%), Gaps = 24/557 (4%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC 128
F ++ F + Y L+ + + L G+ VH H++ + +P L N++LNMY KC
Sbjct: 48 FPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKC 107
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G A +FD+M + N+V++ ++I+G Q + + L+ + + GL D++T +
Sbjct: 108 GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGAL 167
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
ACS + G+ +H ++ GS ++ N+LI MY+K ++ A +F + D
Sbjct: 168 TACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGV 227
Query: 249 SWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVA--SCSNANEAMSLFSEMGD 303
SW S+I G+ K + T+ +M LA +NT G A +CS+ +F M
Sbjct: 228 SWNSLIAGYVQNGKYEELLTILQKMHQNGLA-FNTYTLGSALKACSSNFNGCKMFGTMLH 286
Query: 304 RELIPDGLTV-----RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ--- 355
I GL + +LL SL +QI ++ K + +LQ +
Sbjct: 287 DHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 346
Query: 356 ---AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
A + LF M + KP T++ ++ AC + + Q+H + K GL D ++
Sbjct: 347 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYI 406
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
+ L+D+Y GS+ A FN + + +V +++I GY Q G E AL LF + +
Sbjct: 407 GSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEE 466
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+P+ ++++C+++G++ G Q+ + + GI ++ + + A++G ++ A
Sbjct: 467 KPDEFIXSTIMSSCANMGMLRSGEQI-QGHATKVGISRFTIFQNSQIWMYAKSGDLYAAN 525
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK---IDPTNSAALVLLCNIYA 589
QM + DIV W +++ S HG+ R E ++K I+P + A L +L +
Sbjct: 526 LTFQQME-NPDIVSWSTMICSNAQHGHAMEALRFFE-LMKSCGIEPNHFAFLGVLIAC-S 582
Query: 590 SSGKWEEVARLMGSMKE 606
G EE R +M++
Sbjct: 583 HRGLVEEGLRYFDTMEK 599
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 202/677 (29%), Positives = 340/677 (50%), Gaps = 97/677 (14%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+ A ++ D +R W+ + + N+ EA FD + NF ++A +I
Sbjct: 64 VSDARQLFDKMSQRNLVSWN-TMIAGYLHNNMVEEAHKLFDLMAERDNF-----SWALMI 117
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
+ + L+ R++ + + + D N ++ Y K G +DA VF++MP +++V
Sbjct: 118 TCYTRKGMLEKARELFELVPD---KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLV 174
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC---------------- 191
S+ +M+AG +QNG+ A++ + +M + ++ + C
Sbjct: 175 SYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPN 234
Query: 192 -----SGLCCVGLGRQLHAHVIKSEH------GSHLISQNALIAMYTKFDRILDAWNVFS 240
+ LC G R H ++++ +++S NA+IA Y + +I +A +F
Sbjct: 235 AVSWVTMLC--GFAR--HGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFK 290
Query: 241 SIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
KD SW +MI+G+ KLD AR V+N+M ++A+ +++G+ +EA +
Sbjct: 291 ETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQV 350
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--- 354
FS++ R D + S++ + + + + + +PV NA+ +
Sbjct: 351 FSQLNKR----DAICWNSMIAGYCQSGRMSEALNL---------FRQMPVKNAVSWNTMI 397
Query: 355 ----QAGELFR--------------------------------LFSLMLASQ--TKPDHI 376
QAGE+ R L SL+L Q KPD
Sbjct: 398 SGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQS 457
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
TF + +CA +A+L++G QLH I+K+G D+FV N L+ MY KCG + SA ++F +
Sbjct: 458 TFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDI 517
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
E D++SW+SLI GYA G EA F +M S G P+ VT +G+L+ACSH GL +G+
Sbjct: 518 EGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGV 577
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
L++ M + I P E SC+VDLL R GR+ EA + + M + +W SLLA+C+
Sbjct: 578 DLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRV 637
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
H N+++GK AA +L+++P N++ + L N++A +G+WE+V RL M+ER K+PG S
Sbjct: 638 HKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCS 697
Query: 617 WIEIQTKIHASGNDISG 633
WIE+Q +I +D G
Sbjct: 698 WIEVQNQIQNFVSDDPG 714
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 220/512 (42%), Gaps = 71/512 (13%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ S+ + +N ++ ++ K G + DAR +FD+M QRN+VSW MIAG N
Sbjct: 38 RVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEE 97
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A +L+ M + D F++ +I + + R+L V + NA+IA
Sbjct: 98 AHKLFDLMAER----DNFSWALMITCYTRKGMLEKARELFELVPDKLDTA---CWNAMIA 150
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTI 281
Y K R DA VF + KD+ S+ SM+ G++ K+ A F M N+ SWN +
Sbjct: 151 GYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLM 210
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
+AG + + A LF ++ D P+ ++ ++LC + + ++ + K
Sbjct: 211 VAGFVNNCDLGSAWELFEKIPD----PNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNV 266
Query: 342 YS-NVPVCNAILQHQAGELFRLF-----------SLMLASQTKP----------DHITFN 379
S N + + Q E +LF + M+ + + + +
Sbjct: 267 VSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYK 326
Query: 380 DVMGACAAMASL----------EMGTQL--------------HCYIMKTGLALDVFVM-- 413
DV A M+ L ++ +QL +C + AL++F
Sbjct: 327 DVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMP 386
Query: 414 -------NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
N ++ Y + G + A E+F M +V+SW+SLI G+ Q G +ALK
Sbjct: 387 VKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVL 446
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M G +P+ T L++C+++ ++ G QL+ ++ G I + ++ + A+ G
Sbjct: 447 MGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKS-GYINDLFVSNALIAMYAKCG 505
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
V AE + D++ W SL++ +G
Sbjct: 506 GVQSAEKVFKDIE-GVDLISWNSLISGYALNG 536
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 177/403 (43%), Gaps = 38/403 (9%)
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVF 267
E ++ +QN I K +I +A VFS++ K+ ++ SM+ F+K + AR +F
Sbjct: 12 EQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLF 71
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
++M NL SWNT+IAG + EA LF M +R D + ++ T L
Sbjct: 72 DKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER----DNFSWALMITCYTRKGMLE 127
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACA 386
+ ++ + K + NA++ A + F + D +++N ++
Sbjct: 128 KARELFELVPDK---LDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYT 184
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ + + + + +V N ++ +V LGSA ELF + DP+ VSW +
Sbjct: 185 QNGKMGLAMKFFERMAER----NVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVT 240
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
++ G+A+ G EA KLF RM V V+ ++ A ++E ++L++ + Y
Sbjct: 241 MLCGFARHGKIVEARKLFDRMPCKNV----VSWNAMIAAYVQDLQIDEAVKLFK--ETPY 294
Query: 507 GIIPTRERRSCV-----VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ CV ++ R G++ EA + NQM + D+ +L++ +G +D
Sbjct: 295 --------KDCVSWTTMINGYVRVGKLDEAREVYNQMPY-KDVAAKTALMSGLIQNGRID 345
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
+ + K D +++ Y SG+ E L M
Sbjct: 346 EASQVFSQLNKRDAICWNSMIAG---YCQSGRMSEALNLFRQM 385
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 315/615 (51%), Gaps = 43/615 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +L+ A +V DS + + W+ + + L EA+ F ++ I
Sbjct: 225 DMYGKCGVLEDARKVFDSMVEKNVVTWN-SMIVGYVQNGLNQEAIDVFYDMRVEG---IE 280
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P+ T A +SA ++L +L G++ H + + D +L + I+N Y K G +EDA +V
Sbjct: 281 PTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELV 340
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F M +++VV+W +I+ Q+ Q A+ + M L D T SI+ A + +
Sbjct: 341 FSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNI 400
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG++ H + I+ S ++ N++I MY K +RI DA VF S +D+ W +++ +
Sbjct: 401 KLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAY 460
Query: 258 SKLDF---ARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+++ A +F +M+ PN+ SWN++I G NEA +FS+M P+
Sbjct: 461 AQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNL 520
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
+T +L+ S + + GF E F M +
Sbjct: 521 ITWTTLI----------------SGLAQSGF--------------GYEAILFFQKMQEAG 550
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+P + V+ AC + SL G +H +I + L V V L+DMY KCGS+ A+
Sbjct: 551 IRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAK 610
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
++F+ M ++ ++++I YA G EAL LF+ ++ G+ P+ +T +L+ACSH G
Sbjct: 611 KVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAG 670
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
LV EGL L+ M +++ + P E CVV LL+R G + EA I M F D + SL
Sbjct: 671 LVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSL 730
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L +C+ H +++G+ ++++ K++P+NS V L N YA++G+W EV+ + MK RG+R
Sbjct: 731 LTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLR 790
Query: 611 KVPGQSWIEIQTKIH 625
K PG SWI+ K++
Sbjct: 791 KNPGCSWIQTGGKLN 805
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 153/575 (26%), Positives = 281/575 (48%), Gaps = 18/575 (3%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHIL 107
F SSLCK E++ ++ +F+I P Y +L+ C R+L G+++H IL
Sbjct: 48 FHHISSLCKDGHLQESVHLLSEMEFE-DFQIGPEIYGELLQGCVYERALHTGQQIHARIL 106
Query: 108 SSK--CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+ + + ++ Y KC E A +F + RNV SW A++ + G A
Sbjct: 107 KNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDA 166
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ +++M ++G+ PD F ++++AC L +GLG+ +H +V+K G+ + ++L+ M
Sbjct: 167 LLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDM 226
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTII 282
Y K + DA VF S+ K++ +W SMI G+ + A VF +M + +
Sbjct: 227 YGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTV 286
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT----SPLSLYQGMQ-IHSYII 337
A S S AN + + G I + L + ++L + S + L + + + S ++
Sbjct: 287 ASFLSAS-ANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML 345
Query: 338 KKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+K + N+ + + + HQ G+ + LM + + D +T + ++ A A +++++G +
Sbjct: 346 EKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKE 405
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
HCY ++ L DV V N ++DMY KC + AR++F+ + D+V W++L+ YAQ G
Sbjct: 406 GHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGL 465
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
EALKLF +M+ V PN ++ V+ G V E ++ MQ+ G P +
Sbjct: 466 SGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQS-LGFQPNLITWT 524
Query: 517 CVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
++ LA++G +EA F +M I S+L +C ++ G+ I +
Sbjct: 525 TLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRH 584
Query: 574 DPTNSAALVL-LCNIYASSGKWEEVARLMGSMKER 607
+ S + L ++YA G +E ++ M +
Sbjct: 585 EFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK 619
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 256/513 (49%), Gaps = 44/513 (8%)
Query: 55 CKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQ 112
C+ +AL+ F +Q N F P + +++ AC SL+ + LG+ VH ++L
Sbjct: 158 CRMGFSEDALLGFIEMQENGVF---PDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFG 214
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
+ + +++MYGKCG LEDAR VFD M ++NVV+W +MI G QNG AI+++ M
Sbjct: 215 ACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDM 274
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
G+ P + T S + A + L + G+Q HA I + I +++I Y+K I
Sbjct: 275 RVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLI 334
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
DA VFS + KD+ +WN +I+
Sbjct: 335 EDAELVFSRMLEKDVV----------------------------TWNLLISSYVQHHQVG 366
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+A+++ M L D +T+ S+L A ++ G + H Y I++ S+V V N+I+
Sbjct: 367 KALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSII 426
Query: 353 QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
A E + S T+ D + +N ++ A A + +L + + +V
Sbjct: 427 DMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVI 486
Query: 412 VMNGLMDMYVKCGSLGSARELFNFME----DPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
N ++ +++ G + A+++F+ M+ P++++W++LI G AQ G G EA+ F++M
Sbjct: 487 SWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKM 546
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGI-IPTRERRSCVVDLLARA 525
+ +G+RP+ ++ VL AC+ + + G ++ I ++E+ + +P + +VD+ A+
Sbjct: 547 QEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPV---ATSLVDMYAKC 603
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
G + EA+ + M+ ++ ++ +++++ HG
Sbjct: 604 GSIDEAKKVFHMMS-SKELPIYNAMISAYALHG 635
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 299/601 (49%), Gaps = 79/601 (13%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
R+ P+ T+ + ACS+L GR +H H + + Q D + +L+MY KC L DA
Sbjct: 5 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 64
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE--LYVQMLQSGLMPDQFTFGSIIRACS 192
+F MP R++V+W AM+AG + +G + A+ L +QM L P+ T +++ +
Sbjct: 65 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 124
Query: 193 GLCCVGLGRQLHAHVI----------KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
+ G +HA+ I KS+ ++ AL+ MY K +L
Sbjct: 125 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL--------- 175
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
+AR VF+ M + N +W+ +I G CS +A LF M
Sbjct: 176 -------------------YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 216
Query: 303 DREL-IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------- 352
+ L ++ S L AC S L G Q+H+ + K G ++++ N++L
Sbjct: 217 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 276
Query: 353 ---------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+A E F +F M A +PD T ++ AC
Sbjct: 277 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+ +A+L+ G H ++ GLA + + N L+DMY KCG + +R++FN M D+VSW+
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 396
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
++I GY G G+EA LF M + G P+ VT + +L+ACSH GLV EG + +M +
Sbjct: 397 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHG 456
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
YG+ P E C+VDLL+R G + EA +FI M D+ VW +LL +C+ + N+D+GK+
Sbjct: 457 YGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKK 516
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ I ++ P + VLL NIY+++G+++E A + K +G +K PG SWIEI +H
Sbjct: 517 VSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLH 576
Query: 626 A 626
A
Sbjct: 577 A 577
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 206/458 (44%), Gaps = 54/458 (11%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
ML+ + P+ +TF ++ACS L GR +H H I + + L AL+ MY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES---------PNLASWNTII 282
+ DA ++F+++ +D+ +W +M+ G++ + S PN ++ ++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 283 AGVASCSNANEAMS---------LFSEMGDRELIPDGLTVRSLL----CACTSPL---SL 326
+A + S L + + DG+ + + L C S L +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ---TKPDHITFNDVMG 383
+ M + + +C+ + Q F LF MLA P I +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQ-----AFLLFKAMLAQGLCFLSPTSIA--SALR 233
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
ACA++ L MG QLH + K+G+ D+ N L+ MY K G + A LF+ M D VS
Sbjct: 234 ACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS 293
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV-----GLVEEGLQL 498
+S+L+ GY Q G EEA +F++M++ V P+ T+V ++ ACSH+ G G +
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 353
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
R + +E I + ++D+ A+ GR+ + N M DIV W +++A HG
Sbjct: 354 IRGLASETSIC------NALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG 406
Query: 559 NVDVGKRAAENILKID----PTNSAALVLLCNIYASSG 592
+GK A L+++ P + + L + + SG
Sbjct: 407 ---LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 441
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 314/618 (50%), Gaps = 29/618 (4%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
L A +V D RR W + EAL+ F ++ + + TY +
Sbjct: 44 LRVARQVFDKMPRRDIKSWT-AIMKGYVAATKPEEALILFSAMRVDP-LGVSGDTYVLSV 101
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+ AC ++ G +H + + + + +L+MY + G ++ + VF EMP RN
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRN 161
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
V+WTA I G G + + QM + L D F F ++AC+ L V GR++H
Sbjct: 162 SVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIH 221
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---D 261
HVI + L N+L MYT+ + D +F S++ +D+ W S+I + ++ +
Sbjct: 222 THVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEE 281
Query: 262 FARTVF----NEMESPNLASWNTIIAGVASCSNA--NEAM--SLFS-EMGDRELIPDGLT 312
A F N SPN ++ + A AS S E + ++FS +GD + + +
Sbjct: 282 KAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMM 341
Query: 313 VRSLLCACTSPLS-LYQGMQ---IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLA 368
CA S L+QGM+ I S+ G YS E F+ FS M
Sbjct: 342 KMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAF--------GEECFKYFSWMRQ 393
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ +P ++ MA LE G Q+H + GL + + + L++MY KCGS+
Sbjct: 394 AGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIE 453
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A ++F + D+VS +++I GYA+ G EEA+ LF + RP+ VT + VLTACSH
Sbjct: 454 ASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSH 513
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
G ++ G Q + +MQ Y + P +E C+VDLL RAGR+++AE IN+M + D VVW
Sbjct: 514 SGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWT 573
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL +CK G+V+ G+RAA+ IL++DPT+ LV L NI++S+G W+E A + MK +G
Sbjct: 574 TLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKG 633
Query: 609 VRKVPGQSWIEIQTKIHA 626
V K PG S I I+ ++ A
Sbjct: 634 VIKEPGWSSILIKDQVSA 651
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 206/484 (42%), Gaps = 69/484 (14%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS--GLMPDQFTFGS 186
G L AR VFD+MP+R++ SWTA++ G + A+ L+ M G+ D +
Sbjct: 42 GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++AC + G LHA+ K+ S + +AL+ MY + +I + VF+
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFA------ 155
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD-RE 305
EM N +W I G+ E + FS+M ++
Sbjct: 156 ----------------------EMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQ 193
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN--AILQHQAGEL---F 360
L D L AC + G +IH+++I KGF + + V N A + + GE+
Sbjct: 194 LSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGL 253
Query: 361 RLFS-------------------------------LMLASQTKPDHITFNDVMGACAAMA 389
RLF LM SQ P+ TF ACA+++
Sbjct: 254 RLFESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLS 313
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
L G QLH + GL + V N +M MY C L SA LF M D++SWS++I
Sbjct: 314 RLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIG 373
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
GY+Q GEE K F MR +G +P L +L+ + ++E+G Q++ + G+
Sbjct: 374 GYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALY-LGLE 432
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
RS ++++ ++ G + EA + DIV +++ HG + E
Sbjct: 433 QNPTIRSALINMYSKCGSIIEASKVFEEKD-RTDIVSLTAMINGYAEHGKCEEAIDLFEK 491
Query: 570 ILKI 573
LK+
Sbjct: 492 SLKL 495
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS--GVRPNHVT 478
+ G L AR++F+ M D+ SW++++ GY EEAL LF MR GV +
Sbjct: 39 IDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYV 98
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
L L AC + G L+ + + ++ + S ++D+ R G++ ++ +M
Sbjct: 99 LSVALKACGQSSNIAYGESLHAYAEKTF-LLSSVFVGSALLDMYMRIGKIDKSCRVFAEM 157
Query: 539 AFDDDIVVWKSLL 551
F + V W + +
Sbjct: 158 PFRNS-VTWTAFI 169
>gi|225457491|ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
[Vitis vinifera]
gi|296087996|emb|CBI35279.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 178/575 (30%), Positives = 299/575 (52%), Gaps = 30/575 (5%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
TN YA L+ + R Q GR +H ++ L+NHILNMY KCG L
Sbjct: 29 TNSTHDEDLYATLLRRFAETRDSQHGRALHAKLIKGPLHNSLFLNNHILNMYAKCGHLPH 88
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS- 192
A +FD P RN VSW+ +IAG Q+ + + A+ L+ QM +G+ ++FT S + ACS
Sbjct: 89 AHKLFDHFPHRNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSALHACSL 148
Query: 193 ------------GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+ Q++A V++ ++ N + + ++ +A VF
Sbjct: 149 YDNDSDNNEGYYYSYYLSRLYQVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEALEVFE 208
Query: 241 SIARKDITSWGSMIDGFSKL------DFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
+ KD+ SW +++ G + F R + E P+ +++ +++G+A+ +
Sbjct: 209 ACRGKDVVSWNAVMAGLVQFCCGEVPGFWRRMCCEGVKPDNFAFSGVLSGLAALGDGGMG 268
Query: 295 MSLFSEM-----GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVC 348
+ + ++ G I + L L C SL G++ ++++ + N
Sbjct: 269 VQVHGQLVKCGHGGEVCIGNSLVDMYLKCG-----SLENGIKAFEEMVERDVCTWNQMAA 323
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+ + G L M S + + T + ACA +ASLE G + H +K G +
Sbjct: 324 GCLNCGKPGRALELIEEMRRSGVRMNKFTLATALTACANLASLEEGKKAHGLRIKLGNDV 383
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
DV V N L+DMY KCGS+G A ++F +E VVSW+++I+G+AQ G +AL++F +MR
Sbjct: 384 DVCVDNALLDMYAKCGSMGDALKVFGTVEARSVVSWTTMIMGFAQNGQARKALEIFEQMR 443
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+ G PN++T + VL ACS GL+ EG + + M ++GI P + +C+VD+L RAG +
Sbjct: 444 AEGKAPNYITFICVLYACSQGGLINEGWEYFLSMDRDHGISPGEDHYACMVDMLGRAGHI 503
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA + I +M F ++VW++LL +C+ HG+V+ G AA+ L +D +S+ V+L N++
Sbjct: 504 KEARELIRRMPFQASVLVWQTLLGACRVHGDVETGLLAAKQALSLDKHDSSTYVVLSNMF 563
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
A W+ V L M+ R V+K+PG SWI++ +
Sbjct: 564 ADGRNWKGVGSLRELMETRDVKKMPGSSWIQLNKR 598
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 301/591 (50%), Gaps = 59/591 (9%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
R+ P+ T+ + ACS+L GR +H H + + Q D + +L+MY KC L DA
Sbjct: 5 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 64
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE--LYVQMLQSGLMPDQFTFGSIIRACS 192
+F MP R++V+W AM+AG + +G + A+ L +QM L P+ T +++ +
Sbjct: 65 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 124
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ G +HA+ I++ + S++ L +LD + GS
Sbjct: 125 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMY-----------AKCGS 173
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL-IPDGL 311
++ +AR VF+ M + N +W+ +I G CS +A LF M + L
Sbjct: 174 LL-------YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 226
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----------------- 354
++ S L AC S L G Q+H+ + K G ++++ N++L
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286
Query: 355 -------------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+A E F +F M A +PD T ++ AC+ +A+L+ G
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 346
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H ++ GLA + + N L+DMY KCG + +R++FN M D+VSW+++I GY G
Sbjct: 347 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 406
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G+EA LF M + G P+ VT + +L+ACSH GLV EG + +M + YG+ P E
Sbjct: 407 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY 466
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C+VDLL+R G + EA +FI M D+ VW +LL +C+ + N+D+GK+ + I ++ P
Sbjct: 467 ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP 526
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ VLL NIY+++G+++E A + K +G +K PG SWIEI +HA
Sbjct: 527 EGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHA 577
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 206/458 (44%), Gaps = 54/458 (11%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
ML+ + P+ +TF ++ACS L GR +H H I + + L AL+ MY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES---------PNLASWNTII 282
+ DA ++F+++ +D+ +W +M+ G++ + S PN ++ ++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 283 AGVASCSNANEAMS---------LFSEMGDRELIPDGLTVRSLL----CACTSPL---SL 326
+A + S L + + DG+ + + L C S L +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ---TKPDHITFNDVMG 383
+ M + + +C+ + Q F LF MLA P I +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQ-----AFLLFKAMLAQGLCFLSPTSIA--SALR 233
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
ACA++ L MG QLH + K+G+ D+ N L+ MY K G + A LF+ M D VS
Sbjct: 234 ACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS 293
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV-----GLVEEGLQL 498
+S+L+ GY Q G EEA +F++M++ V P+ T+V ++ ACSH+ G G +
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 353
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
R + +E I + ++D+ A+ GR+ + N M DIV W +++A HG
Sbjct: 354 IRGLASETSIC------NALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG 406
Query: 559 NVDVGKRAAENILKID----PTNSAALVLLCNIYASSG 592
+GK A L+++ P + + L + + SG
Sbjct: 407 ---LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 441
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 183/596 (30%), Positives = 305/596 (51%), Gaps = 82/596 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSK-----CQPDAVLH------NHILNMYGKCG 129
+ ++ L+++C L+LG +H ++ + C L N +++MY +CG
Sbjct: 12 ARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCG 71
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSII 188
EDA VFDEM R+ VSW ++IA G A+ L+ +ML+S D+ TF +++
Sbjct: 72 RREDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTTVL 128
Query: 189 RACS--GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
C+ G + +H V+ + + NAL+ Y + A VF +A K
Sbjct: 129 SECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEK- 187
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
N+ +W +I+G+A E+ SLF +M R +
Sbjct: 188 ---------------------------NVITWTAMISGMARAELYKESFSLFGQM-IRTV 219
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------- 353
+ T L AC L+ +G Q+H ++K GF ++ V + ++
Sbjct: 220 DANNATYSCALLACARSLAAREGQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALT 279
Query: 354 --------------------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
Q G + F LF+ M+ + + D T + V+GA A A
Sbjct: 280 VFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAP 339
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
+G Q+H ++K ++ +V NGL++MY KCG L + +F+ M + VSW+S+I
Sbjct: 340 FALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAA 399
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
+A+ G G E +LF M++ G +P VT + +L ACSHVG ++GL++ M ++YG++P
Sbjct: 400 FARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLP 459
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
E +CVVD+L RAG + +A+ FI F D+ ++W++L+ +C HGN +VGK AAE +
Sbjct: 460 RMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKL 519
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L +DP+ +AA VLL NIY+S G+W++ A++M M E G+RK G+SWIE++ ++H+
Sbjct: 520 LLLDPSCTAAYVLLSNIYSSEGRWDDRAKVMKRMSEMGLRKDTGKSWIELEKEVHS 575
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 37/350 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + + LY E+ F + + +TY+ + AC+ + + G++VH ++ +
Sbjct: 195 MISGMARAELYKESFSLFGQMIRTVD--ANNATYSCALLACARSLAAREGQQVHGLVVKA 252
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + + ++++Y KCG +EDA VF + + V T ++ G +QNG E A EL+
Sbjct: 253 GFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELF 312
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M+ +G D+ T +++ A LG+Q+HA VIK G + N L+ MY+K
Sbjct: 313 AEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKC 372
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ ++ VF + K+ SW N+IIA A
Sbjct: 373 GELRESVRVFDEMPSKNSVSW----------------------------NSIIAAFARHG 404
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP--- 346
+ +E LF M P +T SLL AC+ S +G++I + + + Y +P
Sbjct: 405 HGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQ--YGVLPRME 462
Query: 347 --VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
C + +AG L S + + + + +MGAC+ + E+G
Sbjct: 463 HYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVG 512
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 294/591 (49%), Gaps = 74/591 (12%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R A L+ A + SL+ G ++H I D +L N++++MY KCG L+ A VF
Sbjct: 3 RQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVF 62
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCV 197
M RNVVSWTA++ G ++G + L +M S P+++T + ++AC C V
Sbjct: 63 GGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKAC---CVV 119
Query: 198 G---LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
G G +H +++ + H + ++L+ +Y+K RI DA VF D GS I
Sbjct: 120 GDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVF------DGAGLGSGI 173
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE--LIPDGLT 312
A+WN +++G A + +A+ +F EM E PD T
Sbjct: 174 ---------------------ATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFT 212
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYS------------------NVPVCNAILQH 354
SLL AC+ + +G Q+H+ + GF + +PV + +
Sbjct: 213 FASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFER 272
Query: 355 --------------------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
Q E LF S +PD + V+G A A +E G
Sbjct: 273 LERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQG 332
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
Q+HCY +K DV N ++DMY+KCG A +F M P+VVSW++++ G +
Sbjct: 333 RQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKH 392
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G G EA+ LF MR+ GV P+ VT + +L+ACSH GLV+E + + ++ + + P E
Sbjct: 393 GLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEH 452
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+C+VDLL RAG + EA D I M + + VW++LL++C+ H +V VG+ A + +L +D
Sbjct: 453 YACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMD 512
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N V L N+ A +G+W E ++ +M+ RG++K G SW+E+ ++H
Sbjct: 513 GDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVH 563
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 184/407 (45%), Gaps = 40/407 (9%)
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
M Q ++RA + + G QLH + K GS + N LI MY K + A
Sbjct: 1 MERQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACE 60
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFAR---TVFNEMESPNLASWN--TIIAGVASCSNAN 292
VF + +++ SW +++ GF + A + EM + + A+ N T+ A + +C
Sbjct: 61 VFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVG 120
Query: 293 EAMSLFSEMGDRELIPDGLTVRSL-----LCACTSPLSLYQGMQI---HSYIIKKGFYSN 344
+ + GL VR+ + A + L +G +I G S
Sbjct: 121 DTAAGVG--------IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSG 172
Query: 345 VPVCNAILQHQAGELFRLFSLML-------ASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+ NA++ A +L++ Q +PD TF ++ AC+ + + G Q+
Sbjct: 173 IATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQV 232
Query: 398 HCYIMKTGL--ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H + +G A + + L+DMYVKC L A ++F +E +V+ W++++VG+AQ G
Sbjct: 233 HAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEG 292
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII-PTRER 514
EAL+LFRR SG RP+ L V+ + LVE+G Q++ YGI PT
Sbjct: 293 QVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVH-----CYGIKDPTGTD 347
Query: 515 RSC---VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S +VD+ + G EAE +M ++V W +++ HG
Sbjct: 348 VSAGNSIVDMYLKCGLPDEAERMFREMRA-PNVVSWTTMVNGLGKHG 393
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 275/531 (51%), Gaps = 33/531 (6%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
R VH I+ + ++ L ++ Y + AR VFDE+P+RNV+ MI N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G ++++ M + PD +TF +++ACS + +GR++H K S L
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
N L++MY K GF L AR V +EM ++ SWN
Sbjct: 179 NGLVSMYGKC--------------------------GF--LSEARLVLDEMSRRDVVSWN 210
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+++ G A ++A+ + EM ++ D T+ SLL A S + M + K
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV-SNTTTENVMYVKDMFFKM 269
Query: 340 GFYS----NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
G S NV + + E L+S M A +PD ++ V+ AC ++L +G
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H YI + L ++ + N L+DMY KCG L AR++F M+ DVVSW+++I Y G
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G +A+ LF +++ SG+ P+ + V L ACSH GL+EEG +++M + Y I P E
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 449
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VDLL RAG+V EA FI M+ + + VW +LL +C+ H + D+G AA+ + ++ P
Sbjct: 450 ACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAP 509
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
S VLL NIYA +G+WEEV + MK +G++K PG S +E+ IH
Sbjct: 510 EQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 560
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 180/414 (43%), Gaps = 60/414 (14%)
Query: 35 VDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
V S + FD+I + + + S Y E + F + N R T+ ++
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLK 148
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
ACS ++ +GRK+H + N +++MYGKCG L +AR+V DEM +R+VVS
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +++ G +QN + + A+E+ +M + D T S++ A S + ++ +
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV---MYVKDM 265
Query: 209 KSEHGSH-LISQNALIAMYTKFDRILDAWNVFSS-------------------------- 241
+ G L+S N +I +Y K ++A ++S
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 242 ---------IARKDITS----WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGV 285
I RK + ++ID ++K L+ AR VF M+S ++ SW +I+
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
+A++LFS++ D L+PD + + L AC+ L +G + + Y
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC--FKLMTDHYKIT 443
Query: 346 P-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
P C L +AG++ + + +P+ + ++GAC + ++G
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 57/373 (15%)
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTI----IAGVASCSNANEAMSLFSEMGDREL 306
G ++D + + RTV + + +L +++ + AS + A +F E+ +R +
Sbjct: 46 GQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNV 105
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLM 366
I + +RS + GFY GE ++F M
Sbjct: 106 IIINVMIRSY--------------------VNNGFY--------------GEGVKVFGTM 131
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+PDH TF V+ AC+ ++ +G ++H K GL+ +FV NGL+ MY KCG L
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
AR + + M DVVSW+SL+VGYAQ ++AL++ R M S + + T+ +L A
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV-----VDLLARAGRVHEAEDFINQM--- 538
S+ E + + M + G ++S V + + + EA + ++M
Sbjct: 252 SNT--TTENVMYVKDMFFKMG------KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD 303
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENI--LKIDPTNSAALVLLCNIYASSGKWEE 596
F+ D V S+L +C + +GK+ I K+ P N L ++YA G E+
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEK 362
Query: 597 VARLMGSMKERGV 609
+ +MK R V
Sbjct: 363 ARDVFENMKSRDV 375
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 281/549 (51%), Gaps = 66/549 (12%)
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+V +++ Y G +A +F+E+P+R+VV+WTAMI G + + A ++ +ML+
Sbjct: 43 SVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLR 102
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRI 232
S + P+ FT S+++AC G+ + G AH + ++HG + QNAL+ MY
Sbjct: 103 SEVQPNAFTMSSVLKACKGMKALSCGAL--AHSLATKHGIDRSVYVQNALLDMYAA---- 156
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+ +D A +VFN++ SW T+IAG +
Sbjct: 157 -----------------------SCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGY 193
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+ F +M ++ P+ + AC S S G QIH+ + K G + + PV N+IL
Sbjct: 194 SGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSIL 253
Query: 353 -----------------------------------QHQAGELFRLFSLMLASQTKPDHIT 377
+ + E LF M + KP+ T
Sbjct: 254 DMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFT 313
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F + ACA +A L G Q+H I++ G +V ++N L+DMY KCGS+ + +LF M
Sbjct: 314 FTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMP 373
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D+VSW+++++GY G G+EA+KLF M SG++P+ + +GVL CSH GLV++GL+
Sbjct: 374 GRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLK 433
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+R M +Y I P +E CVVDLL RAGRV EA + M F+ D VW +LL +CK +
Sbjct: 434 YFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAY 493
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
++G AA+ +L P + +LL IYA+ GKW E A++ MK +K G+SW
Sbjct: 494 KLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSW 553
Query: 618 IEIQTKIHA 626
IEI+ ++++
Sbjct: 554 IEIRNEVYS 562
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 171/378 (45%), Gaps = 42/378 (11%)
Query: 78 IRPSTYADLISA--CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P++++ I+A C+S+ S G+++H + DA + N IL+MY +C L DA+
Sbjct: 207 VGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAK 266
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
F E+ ++N+++W +IAG + + ++ L+ QM G P+ FTF SI AC+ L
Sbjct: 267 RCFGELTEKNLITWNTLIAG-YERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLA 325
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+Q+H +++ ++ N+LI MY K I D+ +F + +D+ SW +M+
Sbjct: 326 VLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMI 385
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+ + + EA+ LF EM + PD +
Sbjct: 386 GYGAHGYGK----------------------------EAVKLFDEMVQSGIQPDRIVFMG 417
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQ 370
+LC C+ + +G++ +++ Y+ P C L +AG + F L+
Sbjct: 418 VLCGCSHAGLVDKGLKYFRSMLED--YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMP 475
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIM--KTGLALDVFVMNGLMDMYVKCGSLGS 428
+PD + ++GAC A +G ++ + +A +++ + K G
Sbjct: 476 FEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAK 535
Query: 429 ARELFNFMEDPDVV--SW 444
R+L M V SW
Sbjct: 536 MRKLMKGMNKKKEVGKSW 553
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
+E+L F F + ++ T+ + +AC++L L G++VH I+ + L N
Sbjct: 293 SESLSLF-FQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINS 351
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++MY KCGS+ D+ +F +MP R++VSWT M+ G +G A++L+ +M+QSG+ PD
Sbjct: 352 LIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPD 411
Query: 181 QFTFGSIIRACS--GLCCVGL 199
+ F ++ CS GL GL
Sbjct: 412 RIVFMGVLCGCSHAGLVDKGL 432
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 309/628 (49%), Gaps = 108/628 (17%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS---------- 130
S Y++LI C L+SL + VH ++ L N L++Y + G+
Sbjct: 38 SYYSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFED 97
Query: 131 ---------------------LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
LE AR VFDEMP+R+VVSW MI+G G + A +
Sbjct: 98 IIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFF 157
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG-SHLISQNALIAMYTK 228
+M ++G+ P FT+ +++ S C G+Q+HA +I++ S+++ N+LI MY K
Sbjct: 158 SEMQKAGIRPSGFTYSTLLSFVSSAC---RGKQIHASMIRNGVDLSNVVVGNSLIGMYGK 214
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
F + D+A VF ME ++ SWN++I
Sbjct: 215 FGVV----------------------------DYAFGVFITMEELDITSWNSLIWSCGKS 246
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV- 347
N A+ F M PD TV +++ C++ L +G QI + I+ GF SN V
Sbjct: 247 GYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVS 306
Query: 348 ------------------------------CNAILQ----HQAGE-LFRLFSLMLASQTK 372
CNA++ H GE +LF L L +
Sbjct: 307 SASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLR 366
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P T + V+ A + + ++ G+Q+H ++K+GL DV V + L++MY K G + SA +
Sbjct: 367 PTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKT 426
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F + D++SW+++I+G A G +AL++F+ + G P+ +TL GVL AC+ GLV
Sbjct: 427 FAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLV 486
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+EGL ++ M+ EYG+IP E +C+VD+++R G++ EA D + M + ++W SLL
Sbjct: 487 DEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLC 546
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
+C+ +G++ +R AE +++++P +S ++L Y G+WE + R+ +MKE+GVRKV
Sbjct: 547 ACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVRRAMKEKGVRKV 606
Query: 613 PGQSWIEIQTKI---------HASGNDI 631
G SWI I+ + H G DI
Sbjct: 607 IGCSWIGIKNHVFVFKENQLLHIGGKDI 634
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 160/353 (45%), Gaps = 36/353 (10%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
K N AL F L + + T + +I+ CS+L+ L+ G ++ + ++
Sbjct: 245 KSGYQNLALRQF-VLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNS 303
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++ + ++++ KC LED+ VF+E+ Q + V AMI+ + +G A++L+V L+
Sbjct: 304 IVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRE 363
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
L P +FT ++ A S L V G Q+H+ V+KS S +I ++L+ MY KF I A
Sbjct: 364 NLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSA 423
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F+ I +D+ SW +M I G+A ++A+
Sbjct: 424 MKTFAKIGARDLISWNTM----------------------------IMGLAYNGRVSKAL 455
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNA 350
+F E+ PD +T+ +L AC + +G+ I S + K+ Y +P C
Sbjct: 456 EIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKE--YGVIPAIEHYACIV 513
Query: 351 ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ + G+L ++ +P + + ++ AC L ++ +M+
Sbjct: 514 DMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVME 566
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 315/615 (51%), Gaps = 43/615 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +L+ A +V DS + + W+ + + L EA+ F ++ I
Sbjct: 1320 DMYGKCGVLEDARKVFDSMVEKNVVTWN-SMIVGYVQNGLNQEAIDVFYDMRVEG---IE 1375
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P+ T A +SA ++L +L G++ H + + D +L + I+N Y K G +EDA +V
Sbjct: 1376 PTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELV 1435
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F M +++VV+W +I+ Q+ Q A+ + M L D T SI+ A + +
Sbjct: 1436 FSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNI 1495
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG++ H + I+ S ++ N++I MY K +RI DA VF S +D+ W +++ +
Sbjct: 1496 KLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAY 1555
Query: 258 SKLDF---ARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+++ A +F +M+ PN+ SWN++I G NEA +FS+M P+
Sbjct: 1556 AQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNL 1615
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
+T +L+ S + + GF E F M +
Sbjct: 1616 ITWTTLI----------------SGLAQSGF--------------GYEAILFFQKMQEAG 1645
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+P + V+ AC + SL G +H +I + L V V L+DMY KCGS+ A+
Sbjct: 1646 IRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAK 1705
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
++F+ M ++ ++++I YA G EAL LF+ ++ G+ P+ +T +L+ACSH G
Sbjct: 1706 KVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAG 1765
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
LV EGL L+ M +++ + P E CVV LL+R G + EA I M F D + SL
Sbjct: 1766 LVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSL 1825
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
L +C+ H +++G+ ++++ K++P+NS V L N YA++G+W EV+ + MK RG+R
Sbjct: 1826 LTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLR 1885
Query: 611 KVPGQSWIEIQTKIH 625
K PG SWI+ K++
Sbjct: 1886 KNPGCSWIQTGGKLN 1900
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 153/575 (26%), Positives = 281/575 (48%), Gaps = 18/575 (3%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHIL 107
F SSLCK E++ ++ +F+I P Y +L+ C R+L G+++H IL
Sbjct: 1143 FHHISSLCKDGHLQESVHLLSEMEFE-DFQIGPEIYGELLQGCVYERALHTGQQIHARIL 1201
Query: 108 SSK--CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+ + + ++ Y KC E A +F + RNV SW A++ + G A
Sbjct: 1202 KNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDA 1261
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ +++M ++G+ PD F ++++AC L +GLG+ +H +V+K G+ + ++L+ M
Sbjct: 1262 LLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDM 1321
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTII 282
Y K + DA VF S+ K++ +W SMI G+ + A VF +M + +
Sbjct: 1322 YGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTV 1381
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT----SPLSLYQGMQ-IHSYII 337
A S S AN + + G I + L + ++L + S + L + + + S ++
Sbjct: 1382 ASFLSAS-ANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML 1440
Query: 338 KKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+K + N+ + + + HQ G+ + LM + + D +T + ++ A A +++++G +
Sbjct: 1441 EKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKE 1500
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
HCY ++ L DV V N ++DMY KC + AR++F+ + D+V W++L+ YAQ G
Sbjct: 1501 GHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGL 1560
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
EALKLF +M+ V PN ++ V+ G V E ++ MQ+ G P +
Sbjct: 1561 SGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQS-LGFQPNLITWT 1619
Query: 517 CVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
++ LA++G +EA F +M I S+L +C ++ G+ I +
Sbjct: 1620 TLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRH 1679
Query: 574 DPTNSAALVL-LCNIYASSGKWEEVARLMGSMKER 607
+ S + L ++YA G +E ++ M +
Sbjct: 1680 EFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK 1714
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 256/514 (49%), Gaps = 44/514 (8%)
Query: 55 CKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQ 112
C+ +AL+ F +Q N F P + +++ AC SL+ + LG+ VH ++L
Sbjct: 1253 CRMGFSEDALLGFIEMQENGVF---PDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFG 1309
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
+ + +++MYGKCG LEDAR VFD M ++NVV+W +MI G QNG AI+++ M
Sbjct: 1310 ACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDM 1369
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
G+ P + T S + A + L + G+Q HA I + I +++I Y+K I
Sbjct: 1370 RVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLI 1429
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
DA VFS + KD+ +WN +I+
Sbjct: 1430 EDAELVFSRMLEKDVV----------------------------TWNLLISSYVQHHQVG 1461
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+A+++ M L D +T+ S+L A ++ G + H Y I++ S+V V N+I+
Sbjct: 1462 KALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSII 1521
Query: 353 QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
A E + S T+ D + +N ++ A A + +L + + +V
Sbjct: 1522 DMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVI 1581
Query: 412 VMNGLMDMYVKCGSLGSARELFNFME----DPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
N ++ +++ G + A+++F+ M+ P++++W++LI G AQ G G EA+ F++M
Sbjct: 1582 SWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKM 1641
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGI-IPTRERRSCVVDLLARA 525
+ +G+RP+ ++ VL AC+ + + G ++ I ++E+ + +P + +VD+ A+
Sbjct: 1642 QEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPV---ATSLVDMYAKC 1698
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
G + EA+ + M+ ++ ++ +++++ HG
Sbjct: 1699 GSIDEAKKVFHMMS-SKELPIYNAMISAYALHGQ 1731
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 281/535 (52%), Gaps = 42/535 (7%)
Query: 101 KVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
K+H I ++ + D L ++ Y G AR +FD ++NVV + MI N
Sbjct: 56 KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
A+ ++ ML PD +TF +++ACSGL + +G Q+H ++K ++L
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
NAL+AMY K + +A R V ++M ++ SWN
Sbjct: 176 NALVAMYGKCGCLREA----------------------------RKVLDQMPYRDVVSWN 207
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI--- 336
+++AG A ++A+ + EM L D T+ SL SP+ Y ++ YI
Sbjct: 208 SMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL-----SPVVCYTSLENVQYIHNM 262
Query: 337 ----IKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
KK S NV + + E LF M KPD +T ++ AC +++L
Sbjct: 263 FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSAL 322
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+G +LH YI K L ++ + N L+DMY KCG L AR++F+ M DVVSW+S++ Y
Sbjct: 323 FLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAY 382
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+ G G +A+ LF +M SG P+ + V VL+ACSH GL+++G +R+M +YGI+P
Sbjct: 383 GRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPR 442
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E +C+VDL RAG V EA FI QM + + VW +LL++C+ H +D+G AA+ +
Sbjct: 443 IEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLF 502
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++ P S VLL NIYA +G W++V + +MK+ G++KVPG S +E+ ++H
Sbjct: 503 QLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHT 557
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 190/442 (42%), Gaps = 110/442 (24%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S NLY EAL F + + F T+ ++ ACS L +L++G +VHD I+
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLS-CAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKV 166
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N ++ MYGKCG L +AR V D+MP R+VVSW +M+AG +Q+GQ + A+E+
Sbjct: 167 GLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEIC 226
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M L D T S+ S + C YT
Sbjct: 227 KEMDSLNLNHDAGTMASL----SPVVC-----------------------------YTSL 253
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ + N+F + +K++ S WN +IA + S
Sbjct: 254 ENVQYIHNMFERMTKKNLIS----------------------------WNVMIAIYVNNS 285
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
NEA+SLF +M + + PD +T+ SLL AC +L+ G ++H YI K N+ + N
Sbjct: 286 MPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLEN 345
Query: 350 AILQ--------HQAGELF----------------------------RLFSLMLASQTKP 373
A+L +A ++F LF+ ML S P
Sbjct: 346 ALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNP 405
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKT---GLALDVFVMNGLMDMYVKCGSLGSAR 430
D I F V+ AC+ L+ G H + M T G+ + ++D++ G G
Sbjct: 406 DSIAFVSVLSACSHTGLLDQGR--HYFRMMTEQYGIVPRIEHFACMVDLF---GRAGEVE 460
Query: 431 ELFNFME----DPDVVSWSSLI 448
E ++F++ +P+ W +L+
Sbjct: 461 EAYSFIKQMPMEPNERVWGALL 482
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 23/309 (7%)
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACA 386
+ YI + NV N +++ E +F +ML+ PDH TF V+ AC+
Sbjct: 89 VARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS 148
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ +L +G Q+H I+K GL ++F+ N L+ MY KCG L AR++ + M DVVSW+S
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
++ GYAQ G ++AL++ + M S + + T+ + + L E +Q + N +
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQY---IHNMF 263
Query: 507 GIIPTRERRS--CVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVD 561
+ + S ++ + +EA QM D V SLL +C +
Sbjct: 264 ERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALF 323
Query: 562 VGKRAAENILK--IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+G+R + I K + P LL ++YA G EE + M+ R V SW
Sbjct: 324 LGRRLHKYIEKGNLQPNLLLENALL-DMYAKCGCLEEARDVFDKMRLRDV-----VSWTS 377
Query: 620 IQTKIHASG 628
+ + SG
Sbjct: 378 MMSAYGRSG 386
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 309/589 (52%), Gaps = 49/589 (8%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDARMVFDE 140
Y +L+ C ++ + +++H I+ + + + +++ G L A +F+E
Sbjct: 31 YLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEE 87
Query: 141 MPQR---NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
Q NV W ++I G S + +++ L+ +ML G+ P+ TF + ++C+
Sbjct: 88 NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+QLHAH +K + ++I MY + A VF + +D S+ ++I G+
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 258 SK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
LD AR +F+E+ ++ SWN +I+G EA+ F EM + ++P+ T+
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ--------AGELF------ 360
+L AC S G I S++ GF SN+ + NA++ A ELF
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK 327
Query: 361 ----------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
LF +ML S KP+ +TF ++ ACA + +L++G +H
Sbjct: 328 DVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVH 387
Query: 399 CYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
YI K + + + L+DMY KCG + +A +F M ++ SW++++ G+A G
Sbjct: 388 AYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHA 447
Query: 458 EEALKLFRRMRSSGV-RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
E AL LF M + G+ RP+ +T VGVL+AC+ GLV+ G Q +R M +YGI P +
Sbjct: 448 ERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYG 507
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C++DLLARA + EAE + M + D +W SLL++CK HG V+ G+ AE + +++P
Sbjct: 508 CMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPE 567
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+ A VLL NIYA +G+W++VAR+ + ++G++KVPG + IEI +H
Sbjct: 568 NAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVH 616
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 186/458 (40%), Gaps = 106/458 (23%)
Query: 76 FRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS--- 130
+ ++P+ T+ L +C+ ++ G+++H H L + +H +++MY G
Sbjct: 125 YGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDF 184
Query: 131 ----------------------------LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
L+DAR +FDE+P ++VVSW AMI+G Q+G+
Sbjct: 185 ARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRF 244
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
AI + +M ++ ++P++ T ++ AC LG+ + + V + GS+L NAL
Sbjct: 245 EEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNAL 304
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
I MY K A +F I KD+ SW +MI G+S L
Sbjct: 305 IDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYE------------------ 346
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK---- 338
EA++LF M + P+ +T +L AC +L G +H+YI K
Sbjct: 347 ----------EALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRN 396
Query: 339 ------------------------KGFYS----NVPVCNAIL-----QHQAGELFRLFSL 365
+ F S N+ NA+L A LFS
Sbjct: 397 SSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSE 456
Query: 366 MLASQT-KPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKC 423
M+ +PD ITF V+ AC +++G Q I G++ + ++D+ +
Sbjct: 457 MVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARA 516
Query: 424 GSLGSARELFNFME-DPDVVSWSSLIV-----GYAQFG 455
A L ME +PD W SL+ G +FG
Sbjct: 517 EKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFG 554
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 159/348 (45%), Gaps = 34/348 (9%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C D A E+ D + W+ + +LY EAL F+ + +N +
Sbjct: 306 DMYCKCGETDIARELFDGIEEKDVISWN-TMIGGYSYLSLYEEALALFEVMLR-SNVKPN 363
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T+ ++ AC+ L +L LG+ VH +I + + +A L +++MY KCG +E A VF
Sbjct: 364 DVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVF 423
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCV 197
M RN+ SW AM++G + +G A+ L+ +M+ GL PD TF ++ AC+ V
Sbjct: 424 RSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLV 483
Query: 198 GLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
LG Q +I+ ++G L +I + + ++ +A + ++ D WGS++
Sbjct: 484 DLGHQYFRSMIQ-DYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLL 542
Query: 255 ---DGFSKLDFARTVFN---EMESPNLASW---NTIIAGVASCSNANEAMSLFSEMGDRE 305
+++F V ++E N ++ + I AG + + ++ G ++
Sbjct: 543 SACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKK 602
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
+P CT S+ +H +++ F+ P CN I +
Sbjct: 603 -VP----------GCT---SIEIDGDVHEFLVGDKFH---PECNNIYK 633
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 281/549 (51%), Gaps = 66/549 (12%)
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+V +++ Y G +A +F+E+P+R+VV+WTAMI G + + A ++ +ML+
Sbjct: 43 SVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLR 102
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRI 232
S + P+ FT S+++AC G+ + G AH + ++HG + QNAL+ MY
Sbjct: 103 SEVQPNAFTMSSVLKACKGMKALSCGAL--AHSLATKHGIDRSVYVQNALLDMYAA---- 156
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+ +D A +VFN++ SW T+IAG +
Sbjct: 157 -----------------------SCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGY 193
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+ F +M ++ P+ + AC S S G QIH+ + K G + + PV N+IL
Sbjct: 194 SGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSIL 253
Query: 353 -----------------------------------QHQAGELFRLFSLMLASQTKPDHIT 377
+ + E LF M + KP+ T
Sbjct: 254 DMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFT 313
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F + ACA +A L G Q+H I++ G +V ++N L+DMY KCGS+ + +LF M
Sbjct: 314 FTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMP 373
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D+VSW+++++GY G G+EA+KLF M SG++P+ + +GVL CSH GLV++GL+
Sbjct: 374 GRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLK 433
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+R M +Y I P +E CVVDLL RAGRV EA + M F+ D VW +LL +CK +
Sbjct: 434 YFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAY 493
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
++G AA+ +L P + +LL IYA+ GKW E A++ MK +K G+SW
Sbjct: 494 KLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSW 553
Query: 618 IEIQTKIHA 626
IEI+ ++++
Sbjct: 554 IEIRNEVYS 562
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 171/378 (45%), Gaps = 42/378 (11%)
Query: 78 IRPSTYADLISA--CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P++++ I+A C+S+ S G+++H + DA + N IL+MY +C L DA+
Sbjct: 207 VGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAK 266
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
F E+ ++N+++W +IAG + + ++ L+ QM G P+ FTF SI AC+ L
Sbjct: 267 RCFGELTEKNLITWNTLIAG-YERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLA 325
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+Q+H +++ ++ N+LI MY K I D+ +F + +D+ SW +M+
Sbjct: 326 VLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMI 385
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+ + + EA+ LF EM + PD +
Sbjct: 386 GYGAHGYGK----------------------------EAVKLFDEMVQSGIQPDRIVFMG 417
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQ 370
+LC C+ + +G++ +++ Y+ P C L +AG + F L+
Sbjct: 418 VLCGCSHAGLVDKGLKYFRSMLED--YNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMP 475
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIM--KTGLALDVFVMNGLMDMYVKCGSLGS 428
+PD + ++GAC A +G ++ + +A +++ + K G
Sbjct: 476 FEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAK 535
Query: 429 ARELFNFMEDPDVV--SW 444
R+L M V SW
Sbjct: 536 MRKLMKGMNKKKEVGKSW 553
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
+E+L F F + ++ T+ + +AC++L L G++VH I+ + L N
Sbjct: 293 SESLSLF-FQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINS 351
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++MY KCGS+ D+ +F +MP R++VSWT M+ G +G A++L+ +M+QSG+ PD
Sbjct: 352 LIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPD 411
Query: 181 QFTFGSIIRACS--GLCCVGL 199
+ F ++ CS GL GL
Sbjct: 412 RIVFMGVLCGCSHAGLVDKGL 432
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 298/606 (49%), Gaps = 75/606 (12%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
VAF F TN R ADL+ A + SL+ G ++H + D +L N++++M
Sbjct: 205 VAFPF---PTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDM 261
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFT 183
Y KCG L+ A VF M RNVVSWTA++ G Q+G + L +M S P+++T
Sbjct: 262 YAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYT 321
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+ ++AC +G G +H +++ + H + ++L+ +Y+K RI DA VF
Sbjct: 322 LSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVF---- 377
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG- 302
D G LA+WN +I+G A + +A+ +F EM
Sbjct: 378 --DCAGLGR---------------------GLATWNAMISGYAHAGHGRDALLVFREMRR 414
Query: 303 -----DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-------------- 343
+ + PD T SLL AC + +G Q+H+ + GF +
Sbjct: 415 RRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMY 474
Query: 344 ----NVPVCNAILQH--------------------QAGELFRLFSLMLASQTKPDHITFN 379
+PV + + Q E LF S + D +
Sbjct: 475 VKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLS 534
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
++G A A +E G Q+HCY +K+ DV N ++DMY+KCG A +F +
Sbjct: 535 SIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPAR 594
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+VVSW+++I G + G G EA+ +F MR+ GV P+ VT + +L+ACSH GLV+E + +
Sbjct: 595 NVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYF 654
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
++ + + P E +C+VDLL RAG + EA D I M + + VW++LL++C+ H +
Sbjct: 655 SCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 714
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
V VG+ A + +L ID N V L N++A +G W E ++ +M+ RG++K G SW+E
Sbjct: 715 VAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVE 774
Query: 620 IQTKIH 625
I ++H
Sbjct: 775 IGKEVH 780
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/579 (31%), Positives = 295/579 (50%), Gaps = 74/579 (12%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-- 143
L++ + L+SL+ ++H ++++ N +L +Y KCGS+ ++F+ P
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
NVV+WT +I S++ + A+ + +M +G+ P+ FTF +I+ AC+ + G+Q+
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
HA + K + AL+ MY K GSM+ A
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAK---------------------CGSML-------LA 254
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VF+EM NL SWN++I G A+ +F E+ L PD +++ S+L AC
Sbjct: 255 ENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREV--LSLGPDQVSISSVLSACAGL 312
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGELF--------------- 360
+ L G Q+H I+K+G V V N++ L A +LF
Sbjct: 313 VELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMI 372
Query: 361 -------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
F M+ +PD +++ + A A++A+L GT +H +++KTG
Sbjct: 373 MGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHV 432
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+ + + L+ MY KCGS+ A ++F ++ +VV W+++I + Q GC EA+KLF M
Sbjct: 433 KNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEM 492
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
+ GV P ++T V VL+ACSH G +++G + + M N + I P E +C+VDLL R GR
Sbjct: 493 LNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGR 552
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ EA FI M F+ D +VW +LL +C H NV++G+ AE + K++P N +LL NI
Sbjct: 553 LEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNI 612
Query: 588 YASSGKWE---EVARLMGSMKERGVRKVPGQSWIEIQTK 623
Y G E EV RLMG GVRK G SWI+++ +
Sbjct: 613 YIRHGMLEEADEVRRLMGI---NGVRKESGCSWIDVKNR 648
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 219/516 (42%), Gaps = 94/516 (18%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L + L + N +AL F+ ++ T T++ ++ AC+ L G+++H I
Sbjct: 171 LINQLSRSNKPFQALTFFNRMRT-TGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
D + +L+MY KCGS+ A VFDEMP RN+VSW +MI G +N AI ++
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF 289
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
++L G PDQ + S++ AC+GL + G+Q+H ++K + +N+L+ MY K
Sbjct: 290 REVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC 347
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
DA +F +D+ +WN +I G C
Sbjct: 348 GLFEDATKLFCGGGDRDVV----------------------------TWNVMIMGCFRCR 379
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-- 347
N +A + F M + PD + SL A S +L QG IHS+++K G N +
Sbjct: 380 NFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISS 439
Query: 348 --------CNAILQ-----------------------HQAG---ELFRLFSLMLASQTKP 373
C ++L HQ G E +LF ML P
Sbjct: 440 SLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVP 499
Query: 374 DHITFNDVMGACAAMASLEMG-----TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
++ITF V+ AC+ ++ G + + + +K GL +++ L G +G
Sbjct: 500 EYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLL-------GRVGR 552
Query: 429 ARELFNFME----DPDVVSWSSLIVG---YAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
E F+E +PD + W +L+ +A G E + ++ P + L+
Sbjct: 553 LEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDN--PGNYMLLS 610
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
+ G++EE ++ R+M GI R+ C
Sbjct: 611 NIYI--RHGMLEEADEVRRLM----GINGVRKESGC 640
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 188/424 (44%), Gaps = 44/424 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C + A V D R W+ + K LY A+ F + +
Sbjct: 243 DMYAKCGSMLLAENVFDEMPHRNLVSWN-SMIVGFVKNKLYGRAIGVFREV-----LSLG 296
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P + + ++SAC+ L L G++VH I+ + N +++MY KCG EDA +
Sbjct: 297 PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKL 356
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F R+VV+W MI GC + A + M++ G+ PD+ ++ S+ A + + +
Sbjct: 357 FCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAAL 416
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G +H+HV+K+ H + ++L+ MY K +LDA+ VF ++ W +MI
Sbjct: 417 TQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMI--- 473
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
TVF++ C ANEA+ LF EM + ++P+ +T S+L
Sbjct: 474 -------TVFHQ----------------HGC--ANEAIKLFEEMLNEGVVPEYITFVSVL 508
Query: 318 CACTSPLSLYQGMQIHSYI-----IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTK 372
AC+ + G + + + IK G C L + G L + + +
Sbjct: 509 SACSHTGKIDDGFKYFNSMANVHNIKPGLEHY--ACMVDLLGRVGRLEEACRFIESMPFE 566
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD + + ++GAC A++EMG ++ + K M L ++Y++ G L A E+
Sbjct: 567 PDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYM-LLSNIYIRHGMLEEADEV 625
Query: 433 FNFM 436
M
Sbjct: 626 RRLM 629
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 289/538 (53%), Gaps = 18/538 (3%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G+ +H ++ + D + HNH++ YGKCG L AR +FD MP RN VS +++G +
Sbjct: 30 GKAIHAQMIRAA-HFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G+ + A+ L + + +++ + + A + + G+GRQ H + +KS H
Sbjct: 89 AGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYV 145
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF-------SKLDFARTVFNEME 271
NA++ MY + + DA VF +++ DI ++ SMI+GF + R++ E+E
Sbjct: 146 CNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE 205
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL---IPDGLTVRSLLCACTSPLSLYQ 328
+ S+ ++ AS + ++ R L + G + + C +
Sbjct: 206 QWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHS 265
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAA 387
++ + +K S V A Q++ E +LF + +P+ T+ + +CA
Sbjct: 266 AFEV---LPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAG 322
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+A+L+ G L MKTG + V N LM+MY K GS+ A +F M DVVSW+S+
Sbjct: 323 LAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSV 382
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I+GYA G EA+ +F M + + P++VT VGVL AC+ +GLV+EGL IM E G
Sbjct: 383 IIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMG 442
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
I P RE +C+V LL RAGR+ EAE FI D+V WKSLL+SC+ + N +G R A
Sbjct: 443 IKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVA 502
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
E IL++ P + VLL N+YA + +W+ V ++ M+ERGVRK PG SWI++ +++H
Sbjct: 503 EQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVH 560
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 199/430 (46%), Gaps = 56/430 (13%)
Query: 35 VDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPS-----------T 82
V+ ++ F+++ FD+F+ +N + F D + + + RI S +
Sbjct: 159 VEDAVKVFENVSGFDIFA-------FNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVS 211
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y ++ C+S + L LG +VH L + + + + + +++MYGKC DA F+ +P
Sbjct: 212 YVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLP 271
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
++NVVSWTA++ +QN + A++L++ + G+ P++FT+ + +C+GL + G
Sbjct: 272 EKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNA 331
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
L A +K+ H L NAL+ MY+K I DAW VF S+ +D+ SW S+I G++
Sbjct: 332 LSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGL 391
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR EAM +F +M E++P +T +L AC
Sbjct: 392 AR----------------------------EAMCVFHDMLLAEIVPSYVTFVGVLLACAQ 423
Query: 323 PLSLYQGMQIHSYIIKK-GFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ +G+ + ++K+ G C L +AG L +L++ D + +
Sbjct: 424 LGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWK 483
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
++ +C + +G ++ I++ DV L +MY K ++ M +
Sbjct: 484 SLLSSCQVYKNYGLGHRVAEQILQLK-PNDVGTYVLLSNMYAKANRWDGVVKVRKLMRER 542
Query: 440 DV-----VSW 444
V VSW
Sbjct: 543 GVRKEPGVSW 552
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 186/444 (41%), Gaps = 69/444 (15%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L +F + + +SA + +RS +GR+ H + + S Q + N +L+MY +C
Sbjct: 98 LLKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCA 157
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
+EDA VF+ + ++ ++ +MI G G+ + +I + M+ D ++ +++
Sbjct: 158 HVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLG 217
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
C+ + LG Q+HA +K ++ +AL+ MY K D DA + F + K++ S
Sbjct: 218 HCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVS 277
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
W +++ +++ NE +A+ LF ++ + P+
Sbjct: 278 WTAVMTAYTQ--------NE--------------------RFEDALQLFLDLEIEGVRPN 309
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR 361
T L +C +L G + + +K G + + VCNA++ H A +F
Sbjct: 310 EFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFL 369
Query: 362 ----------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+F ML ++ P ++TF V+ ACA + ++
Sbjct: 370 SMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDE 429
Query: 394 GTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARE-LFNFMEDPDVVSWSSLIVG- 450
G +MK G+ ++ + + G L A + + + DVV+W SL+
Sbjct: 430 GLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSC 489
Query: 451 --YAQFGCGEEALKLFRRMRSSGV 472
Y +G G + +++ + V
Sbjct: 490 QVYKNYGLGHRVAEQILQLKPNDV 513
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 281/535 (52%), Gaps = 42/535 (7%)
Query: 101 KVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
K+H I ++ + D L ++ Y G AR +FD ++NVV + MI N
Sbjct: 56 KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
A+ ++ ML PD +TF +++ACSGL + +G Q+H ++K ++L
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
NAL+AMY K + +A R V ++M ++ SWN
Sbjct: 176 NALVAMYGKCGCLREA----------------------------RKVLDQMPYRDVVSWN 207
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI--- 336
+++AG A ++A+ + EM L D T+ SL SP+ Y ++ YI
Sbjct: 208 SMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL-----SPVVCYTSLENVQYIHNM 262
Query: 337 ----IKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
KK S NV + + E LF M KPD +T ++ AC +++L
Sbjct: 263 FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSAL 322
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+G +LH YI K L ++ + N L+DMY KCG L AR++F+ M DVVSW+S++ Y
Sbjct: 323 FLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAY 382
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+ G G +A+ LF +M SG P+ + V VL+ACSH GL+++G +R+M +YGI+P
Sbjct: 383 GRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPR 442
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E +C+VDL RAG V EA FI QM + + VW +LL++C+ H +D+G AA+ +
Sbjct: 443 IEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLF 502
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++ P S VLL NIYA +G W++V + +MK+ G++KVPG S +E+ ++H
Sbjct: 503 QLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHT 557
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 190/442 (42%), Gaps = 110/442 (24%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S NLY EAL F + + F T+ ++ ACS L +L++G +VHD I+
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLS-CAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKV 166
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N ++ MYGKCG L +AR V D+MP R+VVSW +M+AG +Q+GQ + A+E+
Sbjct: 167 GLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEIC 226
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M L D T S+ S + C YT
Sbjct: 227 KEMDSLNLNHDAGTMASL----SPVVC-----------------------------YTSL 253
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ + N+F + +K++ S WN +IA + S
Sbjct: 254 ENVQYIHNMFERMTKKNLIS----------------------------WNVMIAIYVNNS 285
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
NEA+SLF +M + + PD +T+ SLL AC +L+ G ++H YI K N+ + N
Sbjct: 286 MPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLEN 345
Query: 350 AILQ--------HQAGELF----------------------------RLFSLMLASQTKP 373
A+L +A ++F LF+ ML S P
Sbjct: 346 ALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNP 405
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKT---GLALDVFVMNGLMDMYVKCGSLGSAR 430
D I F V+ AC+ L+ G H + M T G+ + ++D++ G G
Sbjct: 406 DSIAFVSVLSACSHTGLLDQGR--HYFRMMTEQYGIVPRIEHFACMVDLF---GRAGEVE 460
Query: 431 ELFNFME----DPDVVSWSSLI 448
E ++F++ +P+ W +L+
Sbjct: 461 EAYSFIKQMPMEPNERVWGALL 482
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 21/308 (6%)
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACA 386
+ YI + NV N +++ E +F +ML+ PDH TF V+ AC+
Sbjct: 89 VARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS 148
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ +L +G Q+H I+K GL ++F+ N L+ MY KCG L AR++ + M DVVSW+S
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
++ GYAQ G ++AL++ + M S + + T+ + + L E +Q + N +
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQY---IHNMF 263
Query: 507 GIIPTRERRS--CVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVD 561
+ + S ++ + +EA QM D V SLL +C +
Sbjct: 264 ERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALF 323
Query: 562 VGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+G+R + I K + + L L ++YA G EE + M+ R V SW +
Sbjct: 324 LGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV-----VSWTSM 378
Query: 621 QTKIHASG 628
+ SG
Sbjct: 379 MSAYGRSG 386
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/636 (29%), Positives = 318/636 (50%), Gaps = 70/636 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNL-YNEALVAFDFLQNNTNFRIRP--S 81
C ++ A +V ++ R W+ +++ C +N + E F L + + P +
Sbjct: 243 CGFVESAVKVFETMRNRNLVSWNSVMYA--CSENGGFGECCGVFKRLLISEEEGLVPDVA 300
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T +I AC+++ +++G VH + ++N +++MY KCG L +AR +FD
Sbjct: 301 TMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMN 360
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+NVVSW +I G S+ G EL +M + + ++ T +++ ACSG +
Sbjct: 361 GGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSL 420
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+++H + + + NA +A Y K S L
Sbjct: 421 KEIHGYAFRHGFLKDELVANAFVAAYAKC----------------------------SSL 452
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
D A VF ME ++SWN +I A +++ LF M D + PD T+ SLL AC
Sbjct: 453 DCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLAC 512
Query: 321 TSPLSLYQGMQIHSYIIKKGF----YSNVPVCNAILQHQAGELFRL-------------- 362
L G +IH ++++ G + + + + +Q + L +L
Sbjct: 513 ARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWN 572
Query: 363 ------------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
F ML+ KP I V+GAC+ +++L +G ++H + +K
Sbjct: 573 VMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKA 632
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L+ D FV L+DMY KCG + ++ +F+ + + D W+ +I GY G G +A++LF
Sbjct: 633 HLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELF 692
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M++ G RP+ T +GVL AC+H GLV EGL+ MQN YG+ P E +CVVD+L R
Sbjct: 693 ELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGR 752
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG++ EA +N+M + D +W SLL+SC+ +G++++G+ ++ +L+++P + VLL
Sbjct: 753 AGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLL 812
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
N+YA GKW+EV ++ MKE G+ K G SWIEI
Sbjct: 813 SNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEI 848
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 266/537 (49%), Gaps = 22/537 (4%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD + DLF S + L+ +A+ F L + T+ T + AC+ +
Sbjct: 151 FDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVAD 210
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
++LG VH L + DA + N ++ MYGKCG +E A VF+ M RN+VSW +++
Sbjct: 211 VELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYA 270
Query: 156 CSQNGQENAAIELYVQML---QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
CS+NG ++ ++L + GL+PD T ++I AC+ + V +G +H K
Sbjct: 271 CSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGI 330
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF---NE 269
+ N+L+ MY+K + +A +F K++ SW ++I G+SK R VF E
Sbjct: 331 TEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQE 390
Query: 270 MESPNLASWN--TIIAGVASCSNANEAMSLFSEMG---DRELIPDGLTVRSLLCACTSPL 324
M+ N T++ + +CS ++ +SL G + D L + + A
Sbjct: 391 MQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCS 450
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLASQTKPDHITFNDVMG 383
SL ++ + K S + A Q+ G+ LF +M+ S PD T ++
Sbjct: 451 SLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLL 510
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
ACA + L G ++H ++++ GL LD F+ LM +Y++C S+ + +F+ ME+ +V
Sbjct: 511 ACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVC 570
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+ +I G++Q EAL FR+M S G++P + + GVL ACS V + G +++
Sbjct: 571 WNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFAL 630
Query: 504 NEYGIIPTRERRSC-VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ + +C ++D+ A+ G + ++++ +++ D+ VW ++A HG+
Sbjct: 631 KAH--LSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDE-AVWNVIIAGYGIHGH 684
>gi|302791537|ref|XP_002977535.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
gi|300154905|gb|EFJ21539.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
Length = 545
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 295/555 (53%), Gaps = 46/555 (8%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ AC L G +H I + Q D V+ N ++NMYGKCG+LE A +F +P+ +
Sbjct: 17 LGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGALESACEIFHGVPRNDA 76
Query: 147 VSWTAMIAGCSQNGQ-ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+SW MI+ +Q+G A+EL+ +M GL P++ TF +I+ A SG + GR++H
Sbjct: 77 ISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILSAVSGARGLEEGRKIHT 136
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
V++S + L NALI MY+K + DA F+ +
Sbjct: 137 QVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGM----------------------- 173
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+E P+L W +IA A + EA LF +M D+ L PD +SL+ + +
Sbjct: 174 --DEKNKPDLVLWTAMIAAYAGHGDYKEAFELFQQMQDQGLKPD----KSLVSIGNAIVH 227
Query: 326 LY-------QGMQIHSYIIKKGFYSNVPVCNAILQHQAG-ELFRLFSLMLASQTKPDHIT 377
+Y ++ + ++ S + +H E ++F +ML PD +T
Sbjct: 228 MYGKCGNVADARKMFDKMKERDTVSWTTMIAVYAEHGYDREALQIFKVMLLESVAPDKVT 287
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGL-ALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
+V+ AC+ ++ L G ++ +++G LD+ + N + M+ CGSL ARE+F +
Sbjct: 288 LINVLDACSNVSGLAQGRLVYKQFVESGAHELDLVLGNAVARMFGSCGSLREAREIFESL 347
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
DVVSW+ LI YAQ G EE+L+LFRRM V+P+ VT VGVL+ACSH GLV +G
Sbjct: 348 AARDVVSWNCLITAYAQHGSFEESLRLFRRMLEECVKPDEVTFVGVLSACSHGGLVADGC 407
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM--AFDDDIVVWKSLLASC 554
Q + M +Y I C+VDLL RAGR+ EAE+ ++++ A +D V+W SLL+SC
Sbjct: 408 QFFVSMVQDYQIPAEEIHYGCMVDLLGRAGRLAEAEELLSRLPCAATND-VMWTSLLSSC 466
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER----GVR 610
K H ++D GKRAA+ +L + P + + L+ L I+A+SG+W+E R+ + ER
Sbjct: 467 KLHSDLDRGKRAAKKLLAMVPGDPSHLLALATIHAASGEWKEAMRIRKEVMERCSGAARG 526
Query: 611 KVPGQSWIEIQTKIH 625
G S IE+ ++H
Sbjct: 527 GAGGMSRIEVNGQVH 541
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 194/427 (45%), Gaps = 41/427 (9%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ PD+ + + AC + G +H+ + ++ ++ NAL+ MY K
Sbjct: 1 MQLQGVAPDRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGA 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ A +F + R D SW MI +++ +R
Sbjct: 61 LESACEIFHGVPRNDAISWNGMISLYAQDGHSR--------------------------- 93
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
EA+ LF M L P+ +T ++L A + L +G +IH+ +++ G+ + V NA+
Sbjct: 94 EEALELFRRMHGEGLTPNKVTFLAILSAVSGARGLEEGRKIHTQVVESGYSGELSVGNAL 153
Query: 352 LQ--HQAGEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ + G L + F+ M + KPD + + ++ A A + +L + GL
Sbjct: 154 IDMYSKCGSLEDARKTFAGM-DEKNKPDLVLWTAMIAAYAGHGDYKEAFELFQQMQDQGL 212
Query: 407 ALD---VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
D V + N ++ MY KCG++ AR++F+ M++ D VSW+++I YA+ G EAL++
Sbjct: 213 KPDKSLVSIGNAIVHMYGKCGNVADARKMFDKMKERDTVSWTTMIAVYAEHGYDREALQI 272
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F+ M V P+ VTL+ VL ACS+V + +G +Y+ + V +
Sbjct: 273 FKVMLLESVAPDKVTLINVLDACSNVSGLAQGRLVYKQFVESGAHELDLVLGNAVARMFG 332
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD----VGKRAAENILKIDPTNSA 579
G + EA + +A D+V W L+ + HG+ + + +R E +K D
Sbjct: 333 SCGSLREAREIFESLAA-RDVVSWNCLITAYAQHGSFEESLRLFRRMLEECVKPDEVTFV 391
Query: 580 ALVLLCN 586
++ C+
Sbjct: 392 GVLSACS 398
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 210/486 (43%), Gaps = 63/486 (12%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYN--EALVAFDFLQNNTNFRIRPST 82
C L+ A E+ R +D ++ SL Q+ ++ EAL F + T
Sbjct: 58 CGALESACEIFHGVPR--NDAISWNGMISLYAQDGHSREEALELFRRMHGE-GLTPNKVT 114
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ ++SA S R L+ GRK+H ++ S + + N +++MY KCGSLEDAR F M
Sbjct: 115 FLAILSAVSGARGLEEGRKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMD 174
Query: 143 QRN---VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
++N +V WTAMIA + +G A EL+ QM GL PD+ L +G
Sbjct: 175 EKNKPDLVLWTAMIAAYAGHGDYKEAFELFQQMQDQGLKPDK-----------SLVSIG- 222
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
NA++ MY K + DA +F + +D SW +MI +++
Sbjct: 223 --------------------NAIVHMYGKCGNVADARKMFDKMKERDTVSWTTMIAVYAE 262
Query: 260 LDFAR---TVFNEMESPNLASWN-TIIAGVASCSNANE------AMSLFSEMGDREL-IP 308
+ R +F M ++A T+I + +CSN + F E G EL +
Sbjct: 263 HGYDREALQIFKVMLLESVAPDKVTLINVLDACSNVSGLAQGRLVYKQFVESGAHELDLV 322
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-GELFRLFSLML 367
G V + +C SL + +I + + S + A QH + E RLF ML
Sbjct: 323 LGNAVARMFGSCG---SLREAREIFESLAARDVVSWNCLITAYAQHGSFEESLRLFRRML 379
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSL 426
KPD +TF V+ AC+ + G Q +++ + + ++D+ + G L
Sbjct: 380 EECVKPDEVTFVGVLSACSHGGLVADGCQFFVSMVQDYQIPAEEIHYGCMVDLLGRAGRL 439
Query: 427 GSARELFNFME--DPDVVSWSSLIVG---YAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
A EL + + + V W+SL+ ++ G+ A K M P+H+ +
Sbjct: 440 AEAEELLSRLPCAATNDVMWTSLLSSCKLHSDLDRGKRAAKKLLAMVPGD--PSHLLALA 497
Query: 482 VLTACS 487
+ A S
Sbjct: 498 TIHAAS 503
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 128/242 (52%), Gaps = 8/242 (3%)
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD + +GAC + L G +H I + GL D+ + N L++MY KCG+L SA E+
Sbjct: 8 PDRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGALESACEI 67
Query: 433 FNFMEDPDVVSWSSLIVGYAQFG-CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
F+ + D +SW+ +I YAQ G EEAL+LFRRM G+ PN VT + +L+A S
Sbjct: 68 FHGVPRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILSAVSGARG 127
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD--DIVVWKS 549
+EEG +++ + E G + ++D+ ++ G + +A M + D+V+W +
Sbjct: 128 LEEGRKIHTQVV-ESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKPDLVLWTA 186
Query: 550 LLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
++A+ HG+ ++ ++ + LK D + + + ++Y G + ++ MK
Sbjct: 187 MIAAYAGHGDYKEAFELFQQMQDQGLKPDKSLVSIGNAIVHMYGKCGNVADARKMFDKMK 246
Query: 606 ER 607
ER
Sbjct: 247 ER 248
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 297/573 (51%), Gaps = 68/573 (11%)
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
SSLR+ + + K + +L +++ Y + G +E+AR +FDEMP R+VV+WT
Sbjct: 21 SSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWT 80
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
AMI G + + A E + +M++ G P++FT S++++C + + G +H V+K
Sbjct: 81 AMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL 140
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
L NA++ MY ++A A +F ++
Sbjct: 141 GMEGSLYVDNAMMNMYATCSVTMEA---------------------------ACLIFRDI 173
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ N +W T+I G + + ++ +M + E+ P +T+ + A S S+
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTT 231
Query: 329 GMQIHSYIIKKGFYSNVPVCNAIL-----------------------------------Q 353
G QIH+ +IK+GF SN+PV N+IL +
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELER 291
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
+ E +F + P+ TF ++ ACA +A+L G QLH I + G +V +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+DMY KCG++ ++ +F + D ++VSW+S+++GY G G EA++LF +M SSG+
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
RP+ + + VL+AC H GLVE+GL+ + +M++EYGI P R+ +CVVDLL RAG++ EA
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHG-NVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
+ + +M F D W ++L +CK H N + + AA ++++ P V+L IYA+
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAE 531
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
GKW + AR+ M+ G +K G SWI ++ ++
Sbjct: 532 GKWVDFARVRKMMRMMGNKKEAGMSWILVENQV 564
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 183/408 (44%), Gaps = 71/408 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-SLEDARMVFDE 140
T + ++ +C +++ L G VH ++ + + N ++NMY C ++E A ++F +
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ +N V+WT +I G + G +++Y QML + +RA + + V G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+HA VIK S+L N+++ +Y + + +A + F + KD+ +W ++I
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI------ 286
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+E+E S+++EA+ +F + +P+ T SL+ AC
Sbjct: 287 -------SELER----------------SDSSEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
+ +L G Q+H I ++GF NV + NA++ A
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSW 383
Query: 357 -------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E LF M++S +PD I F V+ AC +E G + + +M+
Sbjct: 384 TSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-YFNVME 442
Query: 404 T--GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G+ D + N ++D+ + G +G A EL M PD +W +++
Sbjct: 443 SEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 150/317 (47%), Gaps = 33/317 (10%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
N + P + A +S+ S+ G+++H ++ Q + + N IL++Y +CG L +A
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEA 267
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+ F EM +++++W +I+ ++ A + ++ + G +P+ +TF S++ AC+ +
Sbjct: 268 KHYFHEMEDKDLITWNTLISELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACANI 326
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM 253
+ G+QLH + + ++ NALI MY K I D+ VF I R+++ SW SM
Sbjct: 327 AALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSM 386
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ G+ + EA+ LF +M + PD +
Sbjct: 387 MIGYGSHGYGA----------------------------EAVELFDKMVSSGIRPDRIVF 418
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI--LQHQAGELFRLFSLMLASQ 370
++L AC + +G++ + + + G + + N + L +AG++ + L+
Sbjct: 419 MAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 371 TKPDHITFNDVMGACAA 387
KPD T+ ++GAC A
Sbjct: 479 FKPDESTWGAILGACKA 495
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 312/619 (50%), Gaps = 79/619 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
L S + +L E L F +Q+ +P+ T+A + + G +VH ++
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGT---QPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 225
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ + N ++N+Y KCG++ AR++FD+ ++VV+W +MI+G + NG + A+
Sbjct: 226 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 285
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN---ALIA 224
++ M + + + +F SII+ C+ L + QLH V+K + QN AL+
Sbjct: 286 MFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKY---GFVFDQNIRTALMV 342
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
Y+K +LDA +F GF N+ SW +I+G
Sbjct: 343 AYSKCMAMLDALRLFKET-------------GFL--------------GNVVSWTAMISG 375
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
EA+ LFSEM + + P+ T +L A L + ++H+ ++K + +
Sbjct: 376 FLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERS 431
Query: 345 VPVCNAILQH---------------------------------QAGEL---FRLFSLMLA 368
V A+L QAGE ++FS +
Sbjct: 432 STVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTK 491
Query: 369 SQTKPDHITFNDVMGACAAM-ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
KP+ TF+ ++ CAA AS+ G Q H + +K+ L + V + L+ MY K G +
Sbjct: 492 GGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIE 551
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
SA E+F + D+VSW+S+I GYAQ G +AL +F+ M+ V+ + VT +GV AC+
Sbjct: 552 SAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACT 611
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLVEEG + + IM + I PT+E SC+VDL +RAG++ +A I+ M +W
Sbjct: 612 HAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIW 671
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+++LA+C+ H ++G+ AAE I+ + P +SAA VLL N+YA SG W+E A++ M ER
Sbjct: 672 RTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 731
Query: 608 GVRKVPGQSWIEIQTKIHA 626
V+K PG SWIE++ K +A
Sbjct: 732 NVKKEPGYSWIEVKNKTYA 750
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 251/529 (47%), Gaps = 38/529 (7%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S ++ ++ ++L GR++H + D + +++ Y K + +D R VFDE
Sbjct: 98 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDE 157
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M +RNVV+WT +I+G ++N + L+++M G P+ FTF + + + G G
Sbjct: 158 MKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRG 217
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
Q+H V+K+ + N+LI +Y K + A +F K + +W SMI G++
Sbjct: 218 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 260 -LDF-ARTVFNEMESPNLA-SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT---- 312
LD A +F M ++ S ++ + + C+N E F+E ++ G
Sbjct: 278 GLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELR--FTEQLHCSVVKYGFVFDQN 335
Query: 313 VRS-LLCACTSPLSLYQGMQIHSYIIKKGFYSNV----PVCNAILQHQAG-ELFRLFSLM 366
+R+ L+ A + +++ +++ + GF NV + + LQ+ E LFS M
Sbjct: 336 IRTALMVAYSKCMAMLDALRLFK---ETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEM 392
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+P+ T++ ++ A ++ +++H ++KT V L+D YVK G +
Sbjct: 393 KRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 448
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A ++F+ +++ D+V+WS+++ GYAQ G E A+K+F + GV+PN T +L C
Sbjct: 449 DEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVC 508
Query: 487 -SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVHEAEDFINQMAFD 541
+ + +G Q + + I + CV + + A+ G + AE+ + +
Sbjct: 509 AATTASMGQGKQFH-----GFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQR-E 562
Query: 542 DDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCN 586
D+V W S+++ HG +DV K + +K+D + C
Sbjct: 563 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACT 611
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 199/478 (41%), Gaps = 75/478 (15%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A +FD+ P R+ S+T+++ G S++G+ A L++ + G+ D F S+++ +
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
LC GRQLH IK + +L+ Y K D NVF + +++ +W ++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
I G +AR NE E ++LF M D P+ T
Sbjct: 170 ISG-----YARNSLNE-----------------------EVLTLFMRMQDEGTQPNSFTF 201
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---- 361
+ L +G+Q+H+ ++K G +PV N+++ +A LF
Sbjct: 202 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 261
Query: 362 ------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+F M + + +F ++ CA + L QL
Sbjct: 262 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQL 321
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN---FMEDPDVVSWSSLIVGYAQF 454
HC ++K G D + LM Y KC ++ A LF F+ +VVSW+++I G+ Q
Sbjct: 322 HCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFL--GNVVSWTAMISGFLQN 379
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
EEA+ LF M+ GVRPN T +LTA + E Q+ + + T
Sbjct: 380 DGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT--- 436
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
++D + G+V EA + + + DIV W ++LA G + + + K
Sbjct: 437 --ALLDAYVKLGKVDEAAKVFSGID-NKDIVAWSAMLAGYAQAGETEAAIKIFSELTK 491
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 301/591 (50%), Gaps = 59/591 (9%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
R+ P+ T+ + ACS+L GR +H H + + Q D + +L+MY KC L DA
Sbjct: 120 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 179
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE--LYVQMLQSGLMPDQFTFGSIIRACS 192
+F MP R++V+W AM+AG + +G + A+ L +QM L P+ T +++ +
Sbjct: 180 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 239
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ G +HA+ I++ + S++ L +LD + GS
Sbjct: 240 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMY-----------AKCGS 288
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL-IPDGL 311
++ +AR VF+ M + N +W+ +I G CS +A LF M + L
Sbjct: 289 LL-------YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------- 352
++ S L AC S L G Q+H+ + K G ++++ N++L
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
Query: 353 -----------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+A E F +F M A +PD T ++ AC+ +A+L+ G
Sbjct: 402 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 461
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H ++ GLA + + N L+DMY KCG + +R++FN M D+VSW+++I GY G
Sbjct: 462 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 521
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G+EA LF M + G P+ VT + +L+ACSH GLV EG + +M + YG+ P E
Sbjct: 522 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY 581
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C+VDLL+R G + EA +FI M D+ VW +LL +C+ + N+D+GK+ + I ++ P
Sbjct: 582 ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP 641
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ VLL NIY+++G+++E A + K +G +K PG SWIEI +HA
Sbjct: 642 EGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHA 692
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 229/503 (45%), Gaps = 56/503 (11%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA--IELYVQMLQSGLMPDQFTFGS 186
G L A +FD++P +V ++ +I S + AA + LY +ML+ + P+ +TF
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++ACS L GR +H H I + + L AL+ MY K + DA ++F+++ +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMES---------PNLASWNTIIAGVASCSNANEAMS- 296
+ +W +M+ G++ + S PN ++ ++ +A + S
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 297 --------LFSEMGDRELIPDGLTVRSLL----CACTSPL---SLYQGMQIHSYIIKKGF 341
L + + DG+ + + L C S L ++ M + +
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 342 YSNVPVCNAILQHQAGELFRLFSLMLASQ---TKPDHITFNDVMGACAAMASLEMGTQLH 398
+C+ + Q F LF MLA P I + ACA++ L MG QLH
Sbjct: 311 IGGFVLCSRMTQ-----AFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLH 363
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+ K+G+ D+ N L+ MY K G + A LF+ M D VS+S+L+ GY Q G E
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHV-----GLVEEGLQLYRIMQNEYGIIPTRE 513
EA +F++M++ V P+ T+V ++ ACSH+ G G + R + +E I
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC---- 479
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+ ++D+ A+ GR+ + N M DIV W +++A HG +GK A L++
Sbjct: 480 --NALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LGKEATALFLEM 533
Query: 574 D----PTNSAALVLLCNIYASSG 592
+ P + + L + + SG
Sbjct: 534 NNLGFPPDGVTFICLLSACSHSG 556
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG--CGEEALKLFRRMRSSGVRPNHV 477
++ G L A LF+ + PDV +++ LI Y+ + L L+RRM V PN+
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T L ACS + G ++R + G+ + ++D+ + + +A
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHA-GLQADLFVSTALLDMYVKCACLPDAAHIFAT 185
Query: 538 MAFDDDIVVWKSLLASCKTHG 558
M D+V W ++LA HG
Sbjct: 186 MP-ARDLVAWNAMLAGYAHHG 205
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 304/582 (52%), Gaps = 31/582 (5%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLR-----SLQLGRKVHDHILSSKCQPDAV-LHNHIL 122
F+ N+ + P +Y L+S+ L+ GR+VH H++++ V + N ++
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
NMY KCGS+ DAR VF M ++ VSW +MI G QNG A+E Y M + ++P F
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T S + +C+ L LG+Q+H +K ++ NAL+ +Y + + + +FSS+
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG------VASCSNANEAMS 296
D SW S+I ++ + + + N AG S + +
Sbjct: 477 PEHDQVSWNSIIGALARSE------RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 297 LFSEMGD-------RELIPDGLTVRSLLCACTSPLSLYQGMQ-IHSYIIKK--GFYSNVP 346
F E+G + I D T + L AC G + I S + ++ N
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ I + L ML + + D + V+ A A++A+LE G ++H ++ L
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV V + L+DMY KCG L A FN M + SW+S+I GYA+ G GEEALKLF
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 467 MRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M+ G P+HVT VGVL+ACSH GL+EEG + + M + YG+ P E SC+ D+L RA
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLL-ASCKTHG-NVDVGKRAAENILKIDPTNSAALVL 583
G + + EDFI +M ++++W+++L A C+ +G ++GK+AAE + +++P N+ VL
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 830
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N+YA+ G+WE++ + MK+ V+K G SW+ ++ +H
Sbjct: 831 LGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 872
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 228/503 (45%), Gaps = 80/503 (15%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
R H + ++ D L N+++N Y + G AR VFDEMP RN VSW +++G S+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL--GRQLHAHVIKSEHGSHL 216
NG+ A+ M++ G+ +Q+ F S++RAC + VG+ GRQ+H + K +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+ N LI+MY W S+ +A F ++E N
Sbjct: 140 VVSNVLISMY---------WKCIGSVG------------------YALCAFGDIEVKNSV 172
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL---CACTSP-LSLYQGMQI 332
SWN+II+ + + A +FS M P T SL+ C+ T P + L + QI
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE--QI 230
Query: 333 HSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQTKPDHITFNDVM-------- 382
I K G +++ V + ++ ++G L + +T+ + +T N +M
Sbjct: 231 MCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVRQKW 289
Query: 383 -------------------------------GACAAMASLEMGTQLHCYIMKTGLA-LDV 410
+ A L+ G ++H +++ TGL V
Sbjct: 290 GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+ NGL++MY KCGS+ AR +F FM D D VSW+S+I G Q GC EA++ ++ MR
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH 409
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
+ P TL+ L++C+ + + G Q++ + GI + ++ L A G ++E
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHG-ESLKLGIDLNVSVSNALMTLYAETGYLNE 468
Query: 531 AEDFINQMAFDDDIVVWKSLLAS 553
+ M + D V W S++ +
Sbjct: 469 CRKIFSSMP-EHDQVSWNSIIGA 490
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 241/555 (43%), Gaps = 87/555 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQL--GRKVHDH 105
+ S + + EALV FL++ I + YA ++ AC + S+ + GR++H
Sbjct: 73 IVSGYSRNGEHKEALV---FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129
Query: 106 ILSSKCQPDAVLHNHILNMYGKC-GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ DAV+ N +++MY KC GS+ A F ++ +N VSW ++I+ SQ G + +
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLC--CVGLGRQLHAHVIKSEHGSHLISQNAL 222
A ++ M G P ++TFGS++ L V L Q+ + KS + L + L
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL 249
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
++ + K L +AR VFN+ME+ N + N ++
Sbjct: 250 VSAFAK----------------------------SGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 283 AGVASCSNANEAMSLFSEMGDR-ELIPDGLTVRSLLC-----ACTSPLSLYQGMQIHSYI 336
G+ EA LF +M ++ P+ + LL + + L +G ++H ++
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHV 339
Query: 337 IKKGFYS-NVPVCNAILQHQA-----GELFRLFSLMLASQTK------------------ 372
I G V + N ++ A + R+F M +
Sbjct: 340 ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEA 399
Query: 373 -------------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
P T + +CA++ ++G Q+H +K G+ L+V V N LM +
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG-EEALKLFRRMRSSGVRPNHVT 478
Y + G L R++F+ M + D VSW+S+I A+ EA+ F + +G + N +T
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRIT 519
Query: 479 LVGVLTACSHVGLVEEGLQLYRI-MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
VL+A S + E G Q++ + ++N T E + ++ + G + E ++
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE--NALIACYGKCGEMDGCEKIFSR 577
Query: 538 MAFDDDIVVWKSLLA 552
MA D V W S+++
Sbjct: 578 MAERRDNVTWNSMIS 592
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 148/345 (42%), Gaps = 54/345 (15%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR VF+EM N SW I++G + EA+ +M + + S+L AC
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 323 --PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------------------- 353
+ + G QIH + K + + V N ++
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 354 -------HQAGE---LFRLFSLMLASQTKPDHITFND-VMGACA-AMASLEMGTQLHCYI 401
QAG+ FR+FS M ++P TF V AC+ + + Q+ C I
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
K+GL D+FV +GL+ + K GSL AR++FN ME + V+ + L+VG + GEEA
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 462 KLFRRMRSS-GVRPNHVTLVGVLTACSHVGLVEE-GLQLYRIMQNEYGIIPTRERRSCV- 518
KLF M S V P + V +L++ L EE GL+ R + +I T V
Sbjct: 295 KLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGH--VITTGLVDFMVG 350
Query: 519 -----VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
V++ A+ G + +A M D D V W S++ +G
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNG 394
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/585 (29%), Positives = 297/585 (50%), Gaps = 64/585 (10%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ P + + SL ++ +H I+ +A + ++N Y CGS++ AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARS 202
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + +++V W +++ +NG +++L +M G MP+ +TF + ++A GL
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGA 262
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ +H ++K+ + L+ +YT+ G M D
Sbjct: 263 FHFAKSVHGQILKTCYELDPRVGVGLLQLYTQL---------------------GDMSDA 301
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F VFNEM ++ W+ +IA N+A+ +F M + ++P+ T+ S+
Sbjct: 302 FK-------VFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSI 354
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L C G Q+H ++K GF +V V NA++
Sbjct: 355 LNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNV 414
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ G+ +F L +Q +TF+ +GACA++AS+E+G Q+H
Sbjct: 415 VSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGL 474
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+KT A V V N L+DMY KCG + A+ +FN ME DV SW++LI GY+ G G +A
Sbjct: 475 AIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L++F M+ S +PN +T +GVL+ CS+ GL+++G + M ++GI P E +C+V
Sbjct: 535 LRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVR 594
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
L R+G++ +A + I + ++ +++W+++L++ N + +R+AE ILKI+P + A
Sbjct: 595 LFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEAT 654
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N+YA + +W VA + SMKE+GV+K PG SWIE Q +H
Sbjct: 655 YVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVH 699
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+HC I+K G LD+F N L++ YVK G A LF+ M + + VS+ +L GYA C
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA---C 127
Query: 457 GEEALKLFRRMRSSGVRPN 475
++ + L+ R+ G N
Sbjct: 128 -QDPVGLYSRLHREGHELN 145
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 294/518 (56%), Gaps = 44/518 (8%)
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ--FT 183
+ G++ AR VFDEMP R+ VSW ++I G +NG + + L+ GLMP + +
Sbjct: 58 ARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLF------GLMPTKNVVS 111
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
+ S+I C + Q + + + S NA+I+ ++DR+ +A +F +
Sbjct: 112 WNSMIAGCIEDERIDEAWQYFQAMPQR----NTASWNAMISGLVRYDRVEEASRLFEEMP 167
Query: 244 RKDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
R+++ S+ +M+DG++K+ + AR +FN M N+ SW +I+G +EA +LF +
Sbjct: 168 RRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQ 227
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLY--QGMQIHSYIIKKGFYSNVPVC------NAIL 352
M D+ ++ A T+ ++ Y +G + I+ + +P C NA++
Sbjct: 228 MPDKNIV-----------AMTAMITGYCKEGKTDKAKIL----FDQIP-CRDLASWNAMI 271
Query: 353 ----QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
Q+ +GE +L S ML +PDH T V+ AC+++ASL+ G + H ++K+G
Sbjct: 272 TGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYE 331
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+ + N L+ MY KCGS+ + F ++ PDVVSW+++I +A+ G + AL F M
Sbjct: 332 SRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEM 391
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
RS+ V P+ +T + +L+AC H G V E L + M Y I+ E +C+VD+L+R G+
Sbjct: 392 RSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQ 451
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
V +A I +M F+ D +W +LLA+C H NV +G+ AA+ I++++P NS A V+L NI
Sbjct: 452 VEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNI 511
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
YA++G W EV R+ G M+E+GV+K P SW+EI K+H
Sbjct: 512 YAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVH 549
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST +++ACSSL SLQ GRK H +L S + + N ++ MY KCGS+ D+ + F +
Sbjct: 300 STLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQ 359
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ +VVSW AMIA +++G + A+ + +M + + PD TF S++ AC
Sbjct: 360 IDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSAC 410
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/610 (30%), Positives = 295/610 (48%), Gaps = 68/610 (11%)
Query: 61 NEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
N+ AF+ ++P T+A L+S +L+ ++H HI+ ++
Sbjct: 122 NQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVF 181
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++ Y K L+ A +F EMP ++ VS+ MI G ++ G A++L++QM
Sbjct: 182 NSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQ 241
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P FTF +++ G V G+Q+H IK+ + + NAL+ Y+K D I
Sbjct: 242 PSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYI------ 295
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
D A+ +F+EM + S+N II G A ++ LF
Sbjct: 296 ----------------------DLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLF 333
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG- 357
+ ++L L+L G Q H+ + S V V NA++ A
Sbjct: 334 KRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKC 393
Query: 358 -----------------------------------ELFRLFSLMLASQTKPDHITFNDVM 382
E ++F M D TF +
Sbjct: 394 EKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTL 453
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A A +AS+ +G QLH +++ GL VF + L+DMY CGS+ A E+F M D ++V
Sbjct: 454 KASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIV 513
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W++LI Y+Q G E F M SG+ P+ V+ + VLTACSH GLVE+ L + M
Sbjct: 514 CWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSM 573
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
Y + P R+ + ++D+L R+GR +EAE+ I++M F+ D V+W S+L SC+ H N D+
Sbjct: 574 TQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDL 633
Query: 563 GKRAAENILKIDP-TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
K+AA+ + K+D ++AA V + NIYA +GKWE A++ +M+ERGV+KV SW+EI
Sbjct: 634 AKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEID 693
Query: 622 TKIHA-SGND 630
++H + ND
Sbjct: 694 HRVHVFTAND 703
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 209/479 (43%), Gaps = 66/479 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++ Y K +L AR +F+ M RN VSWT MI G SQN Q A LY +M +SG+
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD TF +++ + Q+H+H+I+ + LI N+L+ Y K + A +
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
FS + KD S+ MI G++K F EA+ LF
Sbjct: 201 FSEMPTKDSVSFNVMITGYTKYGFRE----------------------------EALKLF 232
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----QH 354
+M + + P G T ++L + G QIH IK + ++ V NA+L +H
Sbjct: 233 MQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKH 292
Query: 355 --------------------------------QAGELFRLFSLMLASQTKPDHITFNDVM 382
Q + F LF + + + F ++
Sbjct: 293 DYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATML 352
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A +L MG Q H + T +V V N L+DMY KC A +F + + V
Sbjct: 353 SVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSV 412
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W+++I Y Q G EEALK+F+ M V + T L A +++ V G QL+ +
Sbjct: 413 PWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSV 472
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
G++ + S +VD+ A G + +A + +M D +IV W +L+++ +G+ +
Sbjct: 473 I-RLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISAYSQNGDAE 529
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 191/440 (43%), Gaps = 52/440 (11%)
Query: 19 WDAFELCMLLD--QAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFL 70
WD F LLD + +D FD++ + D + + Y ++ F L
Sbjct: 277 WDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRL 336
Query: 71 QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS 130
Q T+F + +A ++S + +L +GR+ H + + + + N +++MY KC
Sbjct: 337 QG-TSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEK 395
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
EDA +F + RN V WTA+I+ Q G A++++ +M + + DQ TF S ++A
Sbjct: 396 FEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKA 455
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
+ L V LG+QLH+ VI+ S + S + L+ MY + DA VF + ++I W
Sbjct: 456 SANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCW 515
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
++I +S+ A F S F++M + L PD
Sbjct: 516 NALISAYSQNGDAEATF----------------------------SSFADMIESGLYPDS 547
Query: 311 LTVRSLLCACT------SPLSLYQGM-QIHSYIIKKGFYSNV--PVCNAILQHQAGELFR 361
++ S+L AC+ L + M Q++ ++ Y+ + +C ++G
Sbjct: 548 VSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLC------RSGRFNE 601
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
+L+ +PD + ++ V+ +C + ++ + + K D + ++Y
Sbjct: 602 AENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYA 661
Query: 422 KCGSLGSARELFNFMEDPDV 441
+ G +A ++ M + V
Sbjct: 662 EAGKWENAAKVKKAMRERGV 681
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR +F+EM N +S N +++G N A LF M R +
Sbjct: 65 ARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEV--------------- 109
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVM 382
S+ I G YS +Q E F L++ M S KPDHITF ++
Sbjct: 110 -----------SWTIMIGGYSQ--------NNQPKEAFNLYTEMCRSGVKPDHITFATLL 150
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
+L+ Q+H +I++ G + + V N L+D Y K L A +LF+ M D V
Sbjct: 151 SGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSV 210
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
S++ +I GY ++G EEALKLF +MR+ +P+ T +L
Sbjct: 211 SFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML 251
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
+N ++ YVK +L ARELF M + VSW+ +I GY+Q +EA L+ M SGV
Sbjct: 80 VNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGV 139
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLY 499
+P+H+T +L+ ++E LQ++
Sbjct: 140 KPDHITFATLLSGFDDTTTLKEVLQIH 166
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 296/585 (50%), Gaps = 64/585 (10%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ P + + SL ++ +H I+ +A + ++N Y CGS++ AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + +++V W +++ +NG +++L M +G MP+ +TF + ++A GL
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ +H ++K+ + L+ +YT+ G M D
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL---------------------GDMSDA 301
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F VFNEM ++ W+ +IA NEA+ LF M + ++P+ T+ S+
Sbjct: 302 FK-------VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSI 354
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L C G Q+H ++K GF ++ V NA++
Sbjct: 355 LNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE 414
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ G+ F +F L +Q +TF+ +GACA++AS+++G Q+H
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGL 474
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+KT A V V N L+DMY KCG + A+ +FN ME DV SW++LI GY+ G G +A
Sbjct: 475 AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L++ M+ +PN +T +GVL+ CS+ GL+++G + + M ++GI P E +C+V
Sbjct: 535 LRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVR 594
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R+G++ +A I + ++ +++W+++L++ N + +R+AE ILKI+P + A
Sbjct: 595 LLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEAT 654
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ N+YA + +W VA + SMKE GV+K PG SWIE Q +H
Sbjct: 655 YVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 40/212 (18%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+HC I+K G LD+F N L++ YVK G A LF+ M + + VS+ +L GYA C
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA---C 127
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
++ + L+ R+ G N HV L+L+ + ++ I P
Sbjct: 128 -QDPIGLYSRLHREGHELN-----------PHV--FTSFLKLF-VSLDKAEICPW----- 167
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
+H I ++ +D + V +L+ + G+VD + E IL D
Sbjct: 168 -----------LHSP---IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIV 213
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
A +V + Y +G +E+ +L+ M+ G
Sbjct: 214 VWAGIV---SCYVENGYFEDSLKLLSCMRMAG 242
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 316/643 (49%), Gaps = 74/643 (11%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C D + C + +A EV W + S K N AL F +++ +
Sbjct: 110 CTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTV-MLSGYTKSNDAFSALEIFREMRH-S 167
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
I T +ISAC + +VH + S D + +++M K G + +
Sbjct: 168 GVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLS 227
Query: 135 RMVF---DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
VF D++ ++N+V+ M+ SQN + AI L+ +MLQ GL PD+F+ S++
Sbjct: 228 ERVFEDLDDIRRQNIVN--VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL--- 282
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
S L C+ LG+Q+H++ +KS L ++L MY+K + +++++F I KD W
Sbjct: 283 SVLDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWA 342
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
SMI GF++ + R EA+ LFSEM D PD
Sbjct: 343 SMISGFNEYGYLR----------------------------EAIGLFSEMLDEGTSPDES 374
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL---------- 359
T+ ++L C+S SL + +IH Y ++ G +P+ +A++ + G L
Sbjct: 375 TLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRL 434
Query: 360 ------------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
F LF M+ S D + ++ A E+G
Sbjct: 435 PEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGA 494
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H YI K GL + V + L+ MY K GS+ + F+ + PD+++W++LI YAQ G
Sbjct: 495 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHG 554
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EAL+++ M+ G +P+ VT VGVL+ACSH GLVEEG M +YGI P
Sbjct: 555 KANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHY 614
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C+VD L R+GR+ EAE+FIN D +VW +LLA+CK +G+V++GK AA+ ++++P
Sbjct: 615 VCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEP 674
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+++ A V L NI A G+W+EV MK GV+K PG S +
Sbjct: 675 SDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 717
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/581 (25%), Positives = 257/581 (44%), Gaps = 77/581 (13%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DAF + + A +V L W+ + +L QN FD N +
Sbjct: 15 DAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYG----AVFDLFHEMCNGFQK 70
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARM 136
P TY+ +++AC+SL L+ G+ V ++ KC D + I+++Y KCG + +AR
Sbjct: 71 PDSYTYSSVLAACASLEELRFGKVVQARVI--KCGAEDVFVCTSIVDLYAKCGHMAEARE 128
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF + +VVSWT M++G +++ +A+E++ +M SG+ + T S+I AC
Sbjct: 129 VFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSM 188
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V Q+HA V KS ALI+M +K I + VF +
Sbjct: 189 VCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDL-------------- 234
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+++ N+ N ++ + +A+ LF+ M L PD +V SL
Sbjct: 235 -----------DDIRRQNIV--NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSL 281
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------- 361
L L G Q+HSY +K G ++ V +++ ++ LF+
Sbjct: 282 LSVLD---CLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDN 338
Query: 362 ---------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
LFS ML T PD T V+ C+++ SL ++H Y
Sbjct: 339 ACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGY 398
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++ G+ + + + L++ Y KCGSL AR++++ + + D VS SSLI GY+Q G ++
Sbjct: 399 TLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDG 458
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
LFR M SG + + +L A E G Q++ + + G+ S ++
Sbjct: 459 FLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYI-TKIGLCTEPSVGSSLLT 517
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ ++ G + + +Q+ D++ W +L+AS HG +
Sbjct: 518 MYSKFGSIEDCCKAFSQIN-GPDLIAWTALIASYAQHGKAN 557
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 211/485 (43%), Gaps = 71/485 (14%)
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
V+ + +++ + K EDA VF + NV W +IAG +N A +L+ +M
Sbjct: 8 VVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNG 67
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
PD +T+ S++ AC+ L + G+ + A VIK + +++ +Y K + +A
Sbjct: 68 FQKPDSYTYSSVLAACASLEELRFGKVVQARVIKC-GAEDVFVCTSIVDLYAKCGHMAEA 126
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
VFS I+ + SW M+ G++K ++A A+
Sbjct: 127 REVFSRISNPSVVSWTVMLSGYTK----------------------------SNDAFSAL 158
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--- 352
+F EM + + TV S++ AC P + + Q+H+++ K GFY + V A++
Sbjct: 159 EIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMN 218
Query: 353 ----------------------------------QHQAGELFRLFSLMLASQTKPDHITF 378
+ G+ RLF+ ML PD +
Sbjct: 219 SKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSV 278
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++ + + L +G Q+H Y +K+GL LD+ V + L MY KCGSL + LF +
Sbjct: 279 CSLL---SVLDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPF 335
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D W+S+I G+ ++G EA+ LF M G P+ TL VLT CS + + ++
Sbjct: 336 KDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEI 395
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ GI S +V+ ++ G + A +++ + D V SL++ HG
Sbjct: 396 HGYTLRA-GIDRGMPLGSALVNTYSKCGSLKLARKVYDRLP-EMDPVSCSSLISGYSQHG 453
Query: 559 NVDVG 563
V G
Sbjct: 454 LVQDG 458
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/601 (32%), Positives = 304/601 (50%), Gaps = 78/601 (12%)
Query: 61 NEALVAFDFLQN--NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
N+A A + + ++ I T +ISAC + +VH + S D+ +
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 119 NHILNMYGKCGSLEDARMVF---DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
+++MY K G ++ + VF D++ ++N+V+ MI SQ+ + AI L+ +MLQ
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
GL D+F+ S++ S L C+ LG+Q+H + +KS L ++L +Y+K + ++
Sbjct: 448 GLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+ +F I KD W SMI GF++ + R EA+
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLR----------------------------EAI 536
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------- 341
LFSEM D PD T+ ++L C+S SL +G +IH Y ++ G
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 342 ------------YSNVP-----VCNAIL----QH---QAGELFRLFSLMLASQTKPDHIT 377
Y +P C++++ QH Q G F LF M+ S D
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG--FLLFRDMVMSGFTMDSFA 654
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ ++ A A +G Q+H YI K GL + V + L+ MY K GS+ + F+ +
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN 714
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
PD+++W++LI YAQ G EAL+++ M+ G +P+ VT VGVL+ACSH GLVEE
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF 774
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
M +YGI P C+VD L R+GR+ EAE FIN M D +VW +LLA+CK H
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIH 834
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
G V++GK AA+ ++++P+++ A + L NI A G+W+EV MK GV+K PG S
Sbjct: 835 GEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSS 894
Query: 618 I 618
+
Sbjct: 895 V 895
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/600 (25%), Positives = 258/600 (43%), Gaps = 82/600 (13%)
Query: 10 HLPRWCCEYWDAFELCMLLD---QAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLY 60
HL R +D F LL +G + D+ + FD I D + S + L+
Sbjct: 73 HLLRRYLLPFDVFLTKSLLSWYSNSGSMADA-AKLFDTIPQPDVVSCNIMISGYKQHRLF 131
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
E+L F + + F +Y +ISACS+L++ V H + V+ +
Sbjct: 132 EESLRFFSKM-HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESA 190
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++++ K EDA VF + NV W +IAG +N A +L+ +M PD
Sbjct: 191 LIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPD 250
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+T+ S++ AC+ L + G+ + A VIK + A++ +Y K + +A VFS
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKC-GAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
I + SW M+ G++K ++A A+ +F E
Sbjct: 310 RIPNPSVVSWTVMLSGYTK----------------------------SNDAFSALEIFKE 341
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------- 352
M + + TV S++ AC P + + Q+H+++ K GFY + V A++
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 353 -----------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+ G+ RLF+ ML + D + V
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS---VCS 458
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+ + L +G Q+H Y +K+GL LD+ V + L +Y KCGSL + +LF + D
Sbjct: 459 LLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC 518
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+S+I G+ ++G EA+ LF M G P+ TL VLT CS + G +++
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
GI + S +V++ ++ G + A +++ + D V SL++ HG + G
Sbjct: 579 RA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQDG 636
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 242/519 (46%), Gaps = 75/519 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDE 140
TY+ +++AC+SL L+ G+ V ++ KC D + I+++Y KCG + +A VF
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P +VVSWT M++G +++ +A+E++ +M SG+ + T S+I AC V
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 201 RQLHAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
Q+HA V KS G +L S ALI+MY+K I + VF +
Sbjct: 371 SQVHAWVFKS--GFYLDSSVAAALISMYSKSGDIDLSEQVFEDL---------------- 412
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++++ N+ N +I + +A+ LF+ M L D +V SLL
Sbjct: 413 ---------DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR--------- 361
L G Q+H Y +K G ++ V +++ ++ +LF+
Sbjct: 462 VLD---CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC 518
Query: 362 -------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
LFS ML T PD T V+ C++ SL G ++H Y +
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ G+ + + + L++MY KCGSL AR++++ + + D VS SSLI GY+Q G ++
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL 638
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LFR M SG + + +L A + G Q++ + + G+ S ++ +
Sbjct: 639 LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI-TKIGLCTEPSVGSSLLTMY 697
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
++ G + + +Q+ D++ W +L+AS HG +
Sbjct: 698 SKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHGKAN 735
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 239/553 (43%), Gaps = 84/553 (15%)
Query: 91 SSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
S L +L+ + + H+L P D L +L+ Y GS+ DA +FD +PQ +VVS
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
MI+G Q+ ++ + +M G ++ ++GS+I ACS L + H IK
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
+ + + ++ALI +++K R DA+ VF +
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYK----------------------------VFRD 210
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
S N+ WNTIIAG N LF EM PD T S+L AC S L G
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG 270
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFS-----------LMLASQTKP 373
+ + +IK G +V VC AI+ A E +FS +ML+ TK
Sbjct: 271 KVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 374 --------------------DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
++ T V+ AC + + +Q+H ++ K+G LD V
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 414 NGLMDMYVKCGSLGSARELFNFMED---PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
L+ MY K G + + ++F ++D ++V + +I ++Q +A++LF RM
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 471 GVRPNHVTLVGVLTA--CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G+R + ++ +L+ C ++G G L + G++ S + L ++ G +
Sbjct: 448 GLRTDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLL 584
E+ + F D+ W S+++ +G + + ++ D + AA++ +
Sbjct: 502 EESYKLFQGIPFKDN-ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 585 CNIYASSGKWEEV 597
C+ + S + +E+
Sbjct: 561 CSSHPSLPRGKEI 573
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/593 (30%), Positives = 297/593 (50%), Gaps = 54/593 (9%)
Query: 80 PSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDAR 135
P T+ L+ C S+ LQ +VH + + VL N ++ + G + AR
Sbjct: 16 PPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYAR 72
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FDE+P+ N+ W MI G S+ + LY++ML+ G+ PD++TF + + +
Sbjct: 73 RLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 132
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ GRQLH HV+K ++ AL+ MY ++ A VF + D+ +W +I
Sbjct: 133 ALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIIS 192
Query: 256 GFSKL---DFARTVFNEMESP--------------------------------------- 273
++K+ + +R +F ME
Sbjct: 193 AYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 252
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
NL N +I A C + A+ +F M +R++I + +++ T+ +
Sbjct: 253 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDII----SWTTIVSGFTNLGEIDVARNYF 308
Query: 334 SYIIKKGFYSNVPVCNA-ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ +K + S + + I ++ E LF M A+ KPD T V+ ACA + +LE
Sbjct: 309 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 368
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G + YI + + D+FV N L+DMY KCG + A +F M D +W+++IVG A
Sbjct: 369 LGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLA 428
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G GE+AL +F M + + P+ +T +GVL+AC+H GLV++G + + M +++GI P
Sbjct: 429 VNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNI 488
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
C+VDLLARAGR+ EA + I M + +VW +LLA C+ + D+ + + IL+
Sbjct: 489 AHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE 548
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++P N A VLLCNIYA+ +W ++ L M ++G++K PG S IE+ ++H
Sbjct: 549 LEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVH 601
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 203/461 (44%), Gaps = 79/461 (17%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ LC LD A V D + W+ + S+ K + E+ F +++ ++ P+
Sbjct: 163 YLLCGQLDTARGVFDVCPKADVITWNM-IISAYNKVGKFEESRRLFLVMEDK---QVLPT 218
Query: 82 TYADLI--SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T ++ SACS L+ L+ G+KVH ++ + K + + VL N +++MY CG ++ A +F
Sbjct: 219 TVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 278
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENA-------------------------------AIEL 168
M R+++SWT +++G + G+ + A+EL
Sbjct: 279 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALEL 338
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ M + + PD+FT S++ AC+ L + LG + ++ +++ + L +NALI MY K
Sbjct: 339 FRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFK 398
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ A ++F ++++D +W +M I G+A
Sbjct: 399 CGDVDKAESIFREMSQRDKFTWTAM----------------------------IVGLAVN 430
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPV 347
+ +A+ +FS M ++PD +T +L ACT + +G + + + G N+
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490
Query: 348 --CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
C L +AG L + ++ K + I + ++ C +M ++K
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEM----VVKQI 546
Query: 406 LALD-----VFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
L L+ V+V+ L ++Y C REL M D +
Sbjct: 547 LELEPDNGAVYVL--LCNIYAACKRWNDLRELRQMMMDKGI 585
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 266/501 (53%), Gaps = 42/501 (8%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G++ A +F + + + W MI G +Q+ AI LY QM + PD+FTF ++
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 85
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+AC+ LC V +G +H V + S+ +N LI + + A +F A++D+
Sbjct: 86 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 145
Query: 249 SWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+W ++ G+++ L AR +F+EM +L SWN +I G A A LF E+ R+
Sbjct: 146 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 205
Query: 306 LIP-DGLTVRSLLCACTS-PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLF 363
++ + + +LC L +++ M+ GEL
Sbjct: 206 VVTWNAMIAGYVLCGSNQQALEMFEEMR-----------------------SVGEL---- 238
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA-LDVFVMNGLMDMYVK 422
PD +T ++ AC + L+ G ++HC I + G L V + N L+DMY K
Sbjct: 239 ---------PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAK 289
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ A E+F M + DV +W+S++ G A G E+++ LF MR +RP+ +T VGV
Sbjct: 290 CGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGV 349
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L ACSH G VEEG Q + +M++EY I P C+VDLL RAG ++EA DFI+ M +
Sbjct: 350 LVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEP 409
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+ +VW++LL +C+ HGNV++G+RA +LK+ S VLL NIYAS G+W+ V ++
Sbjct: 410 NAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRK 469
Query: 603 SMKERGVRKVPGQSWIEIQTK 623
M + GVRK G S IE K
Sbjct: 470 LMDDSGVRKEAGCSLIEGDNK 490
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 40/298 (13%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D V N ++ Y K G +E AR +FDE+P+R+VV+W AMIAG G A+E++ +M
Sbjct: 174 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 233
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS---QNALIAMYTKFD 230
G +PD+ T S++ AC+ L + G+++H + SE G +S NALI MY K
Sbjct: 234 SVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCI--SEMGFRDLSVLLGNALIDMYAKCG 291
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
I+ A VF + KD++ +WN+++ G+A +
Sbjct: 292 SIVRALEVFQGMREKDVS----------------------------TWNSVLGGLAFHGH 323
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV--- 347
A +++ LF+EM ++ PD +T +L AC+ + +G Q + + + Y+ P
Sbjct: 324 AEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQY--FDLMRDEYNIEPNIRH 381
Query: 348 --CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
C L +AG L F + + +P+ I + ++GAC ++E+G + + ++K
Sbjct: 382 YGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLK 439
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 182/444 (40%), Gaps = 85/444 (19%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP T+ ++ AC+ L +++G VH + + + + N ++ + CG L AR
Sbjct: 74 VRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVAR 133
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD +R+VV+W+A+ AG ++ G+
Sbjct: 134 ALFDGSAKRDVVAWSALTAGYARRGE---------------------------------- 159
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G+ RQL + + L+S N +I Y K + A +F + ++D+ +W
Sbjct: 160 -LGVARQLFDEMPVKD----LVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTW----- 209
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
N +IAG C + +A+ +F EM +PD +T+ S
Sbjct: 210 -----------------------NAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLS 246
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQA--GELFRLFSLMLASQTK 372
LL ACT L G +IH I + GF +V + NA++ A G + R + + K
Sbjct: 247 LLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREK 306
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
D T+N V+G A E L + K + D G++ G + R+
Sbjct: 307 -DVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQY 365
Query: 433 FNFMED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
F+ M D P++ + ++ + G EA M+ + PN + +L AC
Sbjct: 366 FDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMK---IEPNAIVWRTLLGACR 422
Query: 488 HVGLVEEG----LQLYRIMQNEYG 507
G VE G +QL ++ +E G
Sbjct: 423 IHGNVELGRRANMQLLKMRHDESG 446
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 266/501 (53%), Gaps = 42/501 (8%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G++ A +F + + + W MI G +Q+ AI LY QM + PD+FTF ++
Sbjct: 61 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 120
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+AC+ LC V +G +H V + S+ +N LI + + A +F A++D+
Sbjct: 121 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 180
Query: 249 SWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+W ++ G+++ L AR +F+EM +L SWN +I G A A LF E+ R+
Sbjct: 181 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 240
Query: 306 LIP-DGLTVRSLLCACTS-PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLF 363
++ + + +LC L +++ M+ GEL
Sbjct: 241 VVTWNAMIAGYVLCGSNQQALEMFEEMR-----------------------SVGEL---- 273
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA-LDVFVMNGLMDMYVK 422
PD +T ++ AC + L+ G ++HC I + G L V + N L+DMY K
Sbjct: 274 ---------PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAK 324
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ A E+F M + DV +W+S++ G A G E+++ LF MR +RP+ +T VGV
Sbjct: 325 CGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGV 384
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L ACSH G VEEG Q + +M++EY I P C+VDLL RAG ++EA DFI+ M +
Sbjct: 385 LVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEP 444
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+ +VW++LL +C+ HGNV++G+RA +LK+ S VLL NIYAS G+W+ V ++
Sbjct: 445 NAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRK 504
Query: 603 SMKERGVRKVPGQSWIEIQTK 623
M + GVRK G S IE K
Sbjct: 505 LMDDSGVRKEAGCSLIEGDNK 525
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 40/298 (13%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D V N ++ Y K G +E AR +FDE+P+R+VV+W AMIAG G A+E++ +M
Sbjct: 209 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 268
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS---QNALIAMYTKFD 230
G +PD+ T S++ AC+ L + G+++H + SE G +S NALI MY K
Sbjct: 269 SVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCI--SEMGFRDLSVLLGNALIDMYAKCG 326
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
I+ A VF + KD++ +WN+++ G+A +
Sbjct: 327 SIVRALEVFQGMREKDVS----------------------------TWNSVLGGLAFHGH 358
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV--- 347
A +++ LF+EM ++ PD +T +L AC+ + +G Q + + + Y+ P
Sbjct: 359 AEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQY--FDLMRDEYNIEPNIRH 416
Query: 348 --CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
C L +AG L F + + +P+ I + ++GAC ++E+G + + ++K
Sbjct: 417 YGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLK 474
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 182/444 (40%), Gaps = 85/444 (19%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP T+ ++ AC+ L +++G VH + + + + N ++ + CG L AR
Sbjct: 109 VRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVAR 168
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD +R+VV+W+A+ AG ++ G+
Sbjct: 169 ALFDGSAKRDVVAWSALTAGYARRGE---------------------------------- 194
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G+ RQL + + L+S N +I Y K + A +F + ++D+ +W
Sbjct: 195 -LGVARQLFDEMPVKD----LVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTW----- 244
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
N +IAG C + +A+ +F EM +PD +T+ S
Sbjct: 245 -----------------------NAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLS 281
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQA--GELFRLFSLMLASQTK 372
LL ACT L G +IH I + GF +V + NA++ A G + R + + K
Sbjct: 282 LLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREK 341
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
D T+N V+G A E L + K + D G++ G + R+
Sbjct: 342 -DVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQY 400
Query: 433 FNFMED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
F+ M D P++ + ++ + G EA M+ + PN + +L AC
Sbjct: 401 FDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMK---IEPNAIVWRTLLGACR 457
Query: 488 HVGLVEEG----LQLYRIMQNEYG 507
G VE G +QL ++ +E G
Sbjct: 458 IHGNVELGRRANMQLLKMRHDESG 481
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 317/644 (49%), Gaps = 97/644 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNN--TNFRIRPSTYADLISACSSL-RSLQLGRKVHDHI 106
L ++LC L+ L A D L++ + T ++ ACS L L+LGR+ H
Sbjct: 133 LIAALC---LFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFA 189
Query: 107 LSSKC--QPDAVLHNHILNMYGKCGSLEDARMVFDEM-----PQRNVVSWTAMIAGCSQN 159
L + + N +L+MY + G ++DA+M+F + P VV+W M++ Q+
Sbjct: 190 LKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQS 249
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK-SEHGSHLIS 218
G+ AIE+ M+ G+ PD TF S + ACS L + LGR++HA+V+K S+ ++
Sbjct: 250 GRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFV 309
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
+AL+ MY +R+ A VF M+ G + L W
Sbjct: 310 ASALVDMYASHERVGVARRVFD------------MVPGGHR--------------QLGLW 343
Query: 279 NTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
N ++ G A EA+ LF+ M + ++P T+ +L AC + +H Y++
Sbjct: 344 NAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVL 403
Query: 338 KKGFYSNVPVCNAILQHQA---------------------------------GELFRLFS 364
K+G N V NA++ A G + F
Sbjct: 404 KRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQ 463
Query: 365 LMLASQTK---------------------PDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
L+ Q + P+++T ++ CA +A+ G ++H Y M+
Sbjct: 464 LVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMR 523
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
L D+ V + L+DMY KCG L +R +F+ + +V++W+ LI+ Y G G+EA+ L
Sbjct: 524 HALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIAL 583
Query: 464 FRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
F RM S+ +PN VT + L ACSH G+V+ G++L+ M+ +G+ PT + +C VD+L
Sbjct: 584 FDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDIL 643
Query: 523 ARAGRVHEAEDFINQM-AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
RAGR+ EA I M + + W S L +C+ H NV +G+ AAE + +++P ++
Sbjct: 644 GRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHY 703
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLLCNIY+++G WE+ + + M++RGV K PG SWIE+ IH
Sbjct: 704 VLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIH 747
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 154/617 (24%), Positives = 260/617 (42%), Gaps = 110/617 (17%)
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLH-------NHILNMYGKCGSLEDARMVFDEM 141
+ ++LRSL R +H L +LH N +L Y +CG L A +F+ M
Sbjct: 68 SAAALRSLIAVRSIHGAALRRD-----LLHGFTPAVANALLTAYARCGDLTAALALFNAM 122
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC-CVGLG 200
P R+ V++ ++IA + A++ ML G FT S++ ACS L + LG
Sbjct: 123 PSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLG 182
Query: 201 RQLHAHVIKSE--HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
R+ HA +K+ G + NAL++MY + + DA +F S+ D G
Sbjct: 183 REAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGG------- 235
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ +WNT+++ + EA+ + +M R + PDG+T S L
Sbjct: 236 ----------------VVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALP 279
Query: 319 ACTSPLSLYQGMQIHSYIIK----------------------------------KGFYSN 344
AC+ L G ++H+Y++K G +
Sbjct: 280 ACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQ 339
Query: 345 VPVCNAIL--QHQAG---ELFRLFSLMLA-SQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+ + NA++ QAG E LF+ M A + P T V+ ACA + +H
Sbjct: 340 LGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVH 399
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
Y++K G+A + FV N LMD+Y + G + +AR +F +E DVVSW++LI G G
Sbjct: 400 GYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIH 459
Query: 459 EALKLFRRMRSSG------------------VRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+A +L R M+ G V PN+VTL+ +L C+ + +G +++
Sbjct: 460 DAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHG 519
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+ + S +VD+ A+ G + + +++ +++ W L+ + HG
Sbjct: 520 YAM-RHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITWNVLIMAYGMHGLG 577
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYA--SSGKWEEVARLMGSMKE-RGVRKVPGQSW 617
D + ++ + + + + A SG + L SMK GV+ P
Sbjct: 578 DEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTP---- 633
Query: 618 IEIQTKIHASGNDISGN 634
+HA DI G
Sbjct: 634 -----DLHACAVDILGR 645
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGL--ALDVFVMNGLMDMYVKCGSLGSARE 431
DH + AA+ SL +H ++ L V N L+ Y +CG L +A
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
LFN M D V+++SLI F AL R M G + TLV VL ACSH+
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLA- 176
Query: 492 VEEGLQLYRIMQN---EYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFDDD--- 543
E L+L R + G + ER + ++ + AR G V +A+ + D
Sbjct: 177 --EDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGG 234
Query: 544 -IVVWKSLLA 552
+V W ++++
Sbjct: 235 GVVTWNTMVS 244
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 307/584 (52%), Gaps = 35/584 (5%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLR-----SLQLGRKVHDHILSSKCQPDAV-LHNHIL 122
F+ N+ + P +Y L+S+ L+ GR+VH H++++ V + N ++
Sbjct: 17 FMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFMVGIGNGLV 76
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
NMY KCGS+ DAR VF M +++ VSW +MI G QNG A+E Y M + ++P F
Sbjct: 77 NMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSF 136
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T S + +C+ L LG+Q+H +K ++ NAL+ +Y + + + +FSS+
Sbjct: 137 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 196
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS--WNTIIAG------VASCSNANEA 294
D SW S+I + +E P + N + AG S + +
Sbjct: 197 PEHDQVSWNSIIGALAS--------SERSLPEAVACFLNALRAGQKLNRITFSSVLSAVS 248
Query: 295 MSLFSEMGD-------RELIPDGLTVRSLLCACTSPLSLYQGMQ-IHSYIIKK--GFYSN 344
F E+G + I D T + L AC G + I S + ++ N
Sbjct: 249 SLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWN 308
Query: 345 VPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ I + L ML + + D + V+ A A++A+LE G ++H ++
Sbjct: 309 SMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA 368
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L DV V + L+DMY KCG L A FN M + SW+S+I GYA+ G GEEALKLF
Sbjct: 369 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 428
Query: 465 RRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
M+ G P+HVT VGVL+ACSH GL+EEG + + M + YG+ P E SC+ DLL
Sbjct: 429 ANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLG 488
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLL-ASCKTHG-NVDVGKRAAENILKIDPTNSAAL 581
RAG + + EDFI++M ++++W+++L A C+ +G ++GK+AAE + +++P N+
Sbjct: 489 RAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 548
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLL N+YA+ G+WE++ + MK+ V+K G SW+ ++ +H
Sbjct: 549 VLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 592
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 294/557 (52%), Gaps = 77/557 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +L+ Y K G L AR VF EM ++ V++ AM+ GCS+ G A++L+ M ++G+
Sbjct: 174 NTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIP 233
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
FTF SI+ +G+ + LG Q+HA V++S ++ N+L+ Y+K D
Sbjct: 234 ATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCD-------- 285
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
LD R +F+EM + S+N IIA A A + LF
Sbjct: 286 --------------------CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLF 325
Query: 299 SEMG----DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-- 352
EM DR+++P ++L S ++ G QIH+ ++ G S + NA++
Sbjct: 326 REMQKLGFDRQVLPYA----TMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDM 381
Query: 353 ------------------------------------QHQAGELFRLFSLMLASQTKPDHI 376
QH+ E +LFS M + +PD
Sbjct: 382 YSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHE--EALQLFSDMRRAGLRPDRA 439
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
TF+ ++ A +++A + +G QLH Y++++G VF + L+DMY KCG L A F+ M
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 499
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ + +SW+++I YA +G + A+K+F M G P+ VT + VL ACSH GL +E +
Sbjct: 500 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ + +M+++Y I P +E +CV+D L R G + + + +M F D ++W S+L SC+
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRI 619
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
HGN ++ + AA+ + ++PT++ V+L NIYA +G+WE+ A + M++RGVRK G S
Sbjct: 620 HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYS 679
Query: 617 WIEIQTKIHA-SGNDIS 632
W+EI+ KI++ + ND++
Sbjct: 680 WVEIKQKIYSFASNDLT 696
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 219/493 (44%), Gaps = 79/493 (16%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N IL+ Y G L A+ +F P RN +WT M+ + G+ + A+ L+ ML G++
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD+ T +++ C V LH IK +H+ N L+ Y K + A V
Sbjct: 138 PDRVTVTTVLNLPG--CTVP---SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + KD ++ +M+ G SK G+ + +A+ LF
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSK-----------------------EGLHT-----QALQLF 224
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG- 357
+ M + T S+L L G Q+H+ +++ NV V N++L +
Sbjct: 225 AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284
Query: 358 ----ELFRLFSLMLASQTKPDHITFNDVMGA-----CAA--------------------- 387
++ RLF M + D++++N ++ A CAA
Sbjct: 285 DCLDDMRRLFDEM----PERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 340
Query: 388 ---------MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ + +G Q+H ++ GLA + + N L+DMY KCG L +A+ F+ +
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 400
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
+SW++LI GY Q G EEAL+LF MR +G+RP+ T ++ A S + ++ G QL
Sbjct: 401 KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + G + S +VD+ A+ G + EA ++M + + + W +++++ +G
Sbjct: 461 HSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISAYAHYG 518
Query: 559 NVDVGKRAAENIL 571
+ E +L
Sbjct: 519 EAKNAIKMFEGML 531
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 28/239 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
YA ++S SL + +G+++H ++ + +L N +++MY KCG L+ A+ F
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+++ +SWTA+I G QNGQ A++L+ M ++GL PD+ TF SII+A S L +GLGRQ
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
LH+++I+S + S + S + L+ MY K + +A F
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF----------------------- 496
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+EM N SWN +I+ A A A+ +F M PD +T S+L AC+
Sbjct: 497 -----DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
L AR +F++M N+ S N I++ +S + A LF R + +R+ A
Sbjct: 59 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAA 118
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ + LF ML PD +T
Sbjct: 119 G----------------------------------RTSDALSLFRAMLGEGVIPDRVTVT 144
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V+ LH + +K GL VFV N L+D Y K G L +AR +F M D
Sbjct: 145 TVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDK 199
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D V+++++++G ++ G +AL+LF MR +G+ H T +LT + + + G Q++
Sbjct: 200 DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVH 259
Query: 500 RIMQNEYGII 509
++ ++
Sbjct: 260 ALVLRSTSVL 269
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++F +N ++ Y G L +A+ LF + +W+ ++ +A G +AL LFR M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 469 SSGVRPNHVTLVGVLT--ACS----HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
GV P+ VT+ VL C+ H ++ GL + + N T C LL
Sbjct: 133 GEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCN------TLLDAYCKHGLL 186
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A A RV F+ D D V + +++ C G
Sbjct: 187 AAARRV-----FLEM--HDKDAVTYNAMMMGCSKEG 215
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 319/649 (49%), Gaps = 80/649 (12%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
C L A ++ D R +I F+ L S + Y +A+ F + N ++ TY
Sbjct: 96 CRELGFARQLFDRMPER--NIISFNSLISGYTQVGFYEQAMELF-LEARDDNLKLDKFTY 152
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A + C L G+ +H ++ + L N +++MY KCG L+ A +FD +
Sbjct: 153 AGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNE 212
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL---- 199
R+ VSW ++I+G + G + L +M ++GL + GS+++AC C+ L
Sbjct: 213 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKAC----CINLNEGL 268
Query: 200 ---GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G +H + K ++ + AL+ MY K + +A +FS + K++ ++ +MI G
Sbjct: 269 MEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISG 328
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F ++D + +E S EA LF EM R L P T +
Sbjct: 329 FLQMD---DITDEASS--------------------EAFKLFMEMQRRGLEPSPSTFSVV 365
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L AC++ +L G QIH+ I K F S+ + +A+++
Sbjct: 366 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI 425
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
Q F LF + +S +P+ T + +M ACA A+L G Q+ Y
Sbjct: 426 ASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGY 485
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K+G+ V + MY K G++ A ++F +++PDV ++S++I AQ G +A
Sbjct: 486 AIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDA 545
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L +F M++ G++PN +GVL AC H GLV G+ ++ M+N YGI P + +C+ D
Sbjct: 546 LNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLAD 605
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R GR+ +AE+ I F D V+W++LL+SC+ + + +GKR AE +++++P S +
Sbjct: 606 LLGRTGRLSDAENLILSSGFQDHPVMWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 665
Query: 581 LVLLCNIYASSG---KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIY SG EEV L M++RGV+K P SWI + + H+
Sbjct: 666 YVLLHNIYNDSGVNSSAEEVREL---MRDRGVKKEPALSWIVLGNQTHS 711
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 236/503 (46%), Gaps = 22/503 (4%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
N + Y L + SL LG+ H H++ S P L N++LNMY KC L A
Sbjct: 43 NTALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFA 102
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R +FD MP+RN++S+ ++I+G +Q G A+EL+++ L D+FT+ + C
Sbjct: 103 RQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGER 162
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
C + G+ LH V+ + + N LI MY+K ++ A ++F +D SW S+I
Sbjct: 163 CDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLI 222
Query: 255 DGFSKLDFARTVFN---EMESPNLASWNTIIAGV--ASCSNANE-----AMSLFSEMGDR 304
G+ ++ A N +M L + V A C N NE M++
Sbjct: 223 SGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKL 282
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------HQAGE 358
+ D + +LL SL + +++ S + K + + + LQ + E
Sbjct: 283 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSE 342
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
F+LF M +P TF+ V+ AC+A +LE G Q+H I K D F+ + L++
Sbjct: 343 AFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 402
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
+Y GS + F D+ SW+S+I + Q E A LFR++ SS +RP T
Sbjct: 403 LYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYT 462
Query: 479 LVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+ +++AC+ + G Q+ Y I + GI ++ + + A++G + A
Sbjct: 463 VSLMMSACADFAALSSGEQIQGYAI---KSGIDAYTSVKTSSISMYAKSGNMPLANKVFI 519
Query: 537 QMAFDDDIVVWKSLLASCKTHGN 559
++ + D+ + ++++S HG+
Sbjct: 520 EVQ-NPDVATYSAMISSLAQHGS 541
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 20/229 (8%)
Query: 351 ILQHQAGELFR-LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
++ Q G +R L SL T D + + A SL +G H +++K+ L
Sbjct: 23 LITKQVGLGYRFLSSLCQPKNTALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPC 82
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
++++N L++MY KC LG AR+LF+ M + +++S++SLI GY Q G E+A++LF R
Sbjct: 83 LYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARD 142
Query: 470 SGVRPNHVTLVGVLTACSH-----VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
++ + T G L C G + GL + + + +I + ++D+ ++
Sbjct: 143 DNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLI------NVLIDMYSK 196
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
G++ +A ++ + D V W SL++ G V VG AAE L +
Sbjct: 197 CGKLDQAMSLFDRCN-ERDQVSWNSLIS-----GYVRVG--AAEEPLNL 237
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 280/508 (55%), Gaps = 50/508 (9%)
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y + +E+AR +FD MP +NV+SW MI G ++ G + A++L+ +M P++
Sbjct: 139 YVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKM------PER--- 189
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+++S N +I + + R+ +A +F+ +
Sbjct: 190 ------------------------------NVVSWNTVITAFMQRRRVDEAQELFNRMPE 219
Query: 245 KDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+D+ SW +M+ G SK +D AR +F++M N+ SWNT+I G A +EA LF +M
Sbjct: 220 RDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQM 279
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELF 360
+REL + +++ L + + + K + V + +Q ++ E
Sbjct: 280 PERELS----SWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEAL 335
Query: 361 RLFSLM-LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
++FS M A+ KP+ TF V+GAC+ +A+L G Q+H I KT V++ L++M
Sbjct: 336 KIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINM 395
Query: 420 YVKCGSLGSARELFN--FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
Y KCG L AR++F+ + DVVSW+ +I YA G G +A+ LF M++ G RP++V
Sbjct: 396 YSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNV 455
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T + +L+ACSH GLV+EGL+L+ + + I + +C+VDL RAGR+ EA DFI
Sbjct: 456 TYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKG 515
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
+ VW +LLA C HG++D+GK AE +L+ +P N+ ++L NIYAS+GKW E
Sbjct: 516 LEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREA 575
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A + MK++G++K PG SWIE+ +H
Sbjct: 576 AGVRMKMKDKGLKKQPGCSWIEVGNTVH 603
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 16/258 (6%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EAL F +Q N + T+ ++ ACS L +L G+++H I + Q A + + +
Sbjct: 333 EALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSAL 392
Query: 122 LNMYGKCGSLEDARMVFDE--MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+NMY KCG LE AR +FD+ + R+VVSW MIA + +G + AI L+ +M G P
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE----HGSHLISQNALIAMYTKFDRILDA 235
D T+ +++ ACS V G +L ++++ H L+ ++ + R+ +A
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHF---TCLVDLFGRAGRLQEA 509
Query: 236 WNVFSSIARKDITS-WGSMIDG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASC 288
++ + K S W +++ G +D + E E N ++ + AS
Sbjct: 510 FDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYAST 569
Query: 289 SNANEAMSLFSEMGDREL 306
EA + +M D+ L
Sbjct: 570 GKWREAAGVRMKMKDKGL 587
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 165/392 (42%), Gaps = 75/392 (19%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTN------FRIRPSTYADLISACSSLRSLQLGRK 101
DLF + ++N+ + V F+Q F P D+IS + + L +
Sbjct: 180 LDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPER--DVISWTTMVAGLSKNGR 237
Query: 102 VHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMPQR--------------- 144
+ D L P + V N ++ Y + L++A +F++MP+R
Sbjct: 238 IDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQN 297
Query: 145 ----------------NVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSI 187
NVV+WTA+I+G Q+G+ A++++ +M + + P++ TF S+
Sbjct: 298 GKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSV 357
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF--SSIARK 245
+ ACS L + G+Q+H + K+ + +ALI MY+K + A +F SI +
Sbjct: 358 LGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHR 417
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
D+ S WN +IA A + ++A+SLF EM
Sbjct: 418 DVVS----------------------------WNGMIAAYAHHGHGHKAISLFDEMQALG 449
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK---GFYSNVPVCNAILQHQAGELFRL 362
PD +T +LL AC+ + +G+++ +++ + C L +AG L
Sbjct: 450 FRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEA 509
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
F + + KP + ++ C +++G
Sbjct: 510 FDFIKGLEVKPSASVWAALLAGCNVHGHIDLG 541
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L+ K G +G AR++F M D DVVSW+++I GY + G EEA LF R +
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR---NDAI 126
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI------------------------I 509
N VT +++ +EE +L+ M + I +
Sbjct: 127 KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKM 186
Query: 510 PTRERRS--CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
P R S V+ + RV EA++ N+M + D++ W +++A +G +D +
Sbjct: 187 PERNVVSWNTVITAFMQRRRVDEAQELFNRMP-ERDVISWTTMVAGLSKNGRIDDARLLF 245
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+ K+ N + + YA + + +E +L M ER
Sbjct: 246 D---KMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPER 282
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+V L+ YV+ + AR LF+ M +V+SW+++I GYA+ G ++AL LF +M
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMP 187
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS--CVVDLLARAG 526
V V+ V+TA V+E +L+ M P R+ S +V L++ G
Sbjct: 188 ERNV----VSWNTVITAFMQRRRVDEAQELFNRM-------PERDVISWTTMVAGLSKNG 236
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLL 551
R+ +A ++M ++V W +++
Sbjct: 237 RIDDARLLFDKMPV-RNVVSWNTMI 260
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 287/543 (52%), Gaps = 56/543 (10%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
C +R RK+ D + K + V ++N Y K +++A +F EMP RNVVSW
Sbjct: 45 CGMIRE---ARKLFDRWDAKK---NVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSW 98
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
M+ G ++NG A++L+ +M P++
Sbjct: 99 NTMVDGYARNGLTQQALDLFRRM------PER---------------------------- 124
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTV 266
+++S N +I + RI DA +F + +D+ SW +M+ G +K ++ AR +
Sbjct: 125 -----NVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARAL 179
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F++M N+ SWN +I G A +EA+ LF M +R++ P + +++ L
Sbjct: 180 FDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDM-P---SWNTMITGFIQNGEL 235
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLAS-QTKPDHITFNDVMGA 384
+ ++ + +K + + +QH + E R+F MLA+ + KP+ TF V+GA
Sbjct: 236 NRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGA 295
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN--FMEDPDVV 442
C+ +A L G Q+H I KT V++ L++MY KCG L +AR++F+ + D++
Sbjct: 296 CSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLI 355
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
SW+ +I YA G G+EA+ LF M+ GV N VT VG+LTACSH GLVEEG + + +
Sbjct: 356 SWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEI 415
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
I + +C+VDL RAGR+ EA + I + + + VW +LLA C HGN D+
Sbjct: 416 LKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADI 475
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
GK AE ILKI+P N+ LL N+YAS GKW+E A + MK+ G++K PG SWIE+
Sbjct: 476 GKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGN 535
Query: 623 KIH 625
+
Sbjct: 536 TVQ 538
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 140/314 (44%), Gaps = 24/314 (7%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ + + L EAL F + + T+ ++ ACS L L G+++H I +
Sbjct: 256 MMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKT 315
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDE--MPQRNVVSWTAMIAGCSQNGQENAAIE 167
Q + + ++NMY KCG L AR +FD+ + QR+++SW MIA + +G AI
Sbjct: 316 VFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAIN 375
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA-LIAMY 226
L+ +M + G+ + TF ++ ACS V G + ++K+ A L+ +
Sbjct: 376 LFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLC 435
Query: 227 TKFDRILDAWNVFSSIARK-DITSWGSMIDG---FSKLDFARTVFN---EMESPNLASWN 279
+ R+ +A N+ + + +T WG+++ G D + V ++E N +++
Sbjct: 436 GRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTYS 495
Query: 280 TIIAGVASCSNANEAMSLFSEMGDREL--------IPDGLTVRSLLCACTSPLSLYQGM- 330
+ AS EA ++ M D L I G TV+ + P S Y+ +
Sbjct: 496 LLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVG-DKPHSQYEPLG 554
Query: 331 ----QIHSYIIKKG 340
+H+ + K G
Sbjct: 555 HLLHDLHTKMKKAG 568
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR------------MRSSG 471
G + AR++F M + D+ W+++I GY + G EA KLF R M +
Sbjct: 15 GEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGY 74
Query: 472 VRPNHVT----------LVGVLTACSHV------GLVEEGLQLYRIMQNEYGIIPTRERR 515
++ N V L V++ + V GL ++ L L+R M P R
Sbjct: 75 IKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM-------PERNVV 127
Query: 516 S--CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
S ++ L + GR+ +A+ +QM D D+V W +++A +G V+ + + ++
Sbjct: 128 SWNTIITALVQCGRIEDAQRLFDQMK-DRDVVSWTTMVAGLAKNGRVEDARALFD---QM 183
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
N + + YA + + +E +L M ER
Sbjct: 184 PVRNVVSWNAMITGYAQNRRLDEALQLFQRMPER 217
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 295/586 (50%), Gaps = 47/586 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++SAC+ +L G +VH I+ + D + N +++ YG+CG ++ R VFD+M
Sbjct: 141 TFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKM 200
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+RNVVSWT++I G ++ G A+ L+ +M++ G+ P+ T +I AC+ L + LG
Sbjct: 201 SERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGE 260
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+ + + E + + NAL+ MY K I A +F K++ + +++ + +
Sbjct: 261 QVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQG 320
Query: 262 FARTVF-------------------------NEMESPNLASW-----------------N 279
AR V +E++ + W N
Sbjct: 321 LAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCN 380
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
II C A +F DR L ++ SL+ + +I S +
Sbjct: 381 AIINMYMKCGKQEMACRVF----DRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDS 436
Query: 340 GFYSNVPVCNAILQHQA-GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
S + A++Q E LF +M + D +T V AC + +L++ +H
Sbjct: 437 DLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIH 496
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
YI K + D+ + L+DM+ +CG SA ++FN M DV +W++ I A G G
Sbjct: 497 GYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGT 556
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
A++LF M G++P+ V V +LTA SH GLVE+G ++R M++ YGI P C+
Sbjct: 557 GAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCM 616
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VDLL RAG + EA IN M + + V+W SLLA+C+ H NVD+ AAE I ++DP +
Sbjct: 617 VDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERT 676
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
VLL NIYAS+G+W++VA++ +KE+G K+PG S IEI KI
Sbjct: 677 GIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKI 722
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 226/499 (45%), Gaps = 44/499 (8%)
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
++++I G S G AI ++ Q++ G +PD FTF ++ AC+ + G Q+H ++
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFART 265
K + +N+LI Y + I VF ++ +++ SW S+I G++K A +
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 266 VFNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+F EM PN + +I+ A + + + +G+ EL + L V +L+
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 322 SPLSLYQGMQIHSYIIKKGF-YSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
++ + +I + K N + N + Q A E+ + ML +PD IT
Sbjct: 287 KCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLS 346
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS--------------- 425
+ AC+ + + G H Y+++ GL V N +++MY+KCG
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKT 406
Query: 426 ----------------LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
+ SA ++F+ M D D+VSW+++I Q +EA++LFR M+S
Sbjct: 407 RVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQS 466
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
G+ + VT+VGV +AC ++G ++ ++ ++ + I + +VD+ AR G
Sbjct: 467 EGITADKVTMVGVASACGYLGALDLAKWIHGYIKKK-DIHFDMHLGTALVDMFARCGDPQ 525
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNI 587
A N+M D+ W + + + GN + +L+ I P + V L
Sbjct: 526 SAMQVFNKMV-KRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKP-DGVVFVALLTA 583
Query: 588 YASSGKWEEVARLMGSMKE 606
+ G E+ + SMK+
Sbjct: 584 LSHGGLVEQGWHIFRSMKD 602
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 145/283 (51%), Gaps = 17/283 (6%)
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL----YQGMQIHSYIIKKGFYS 343
C E L S++ L L++ +L+ +CT + Y + +I G
Sbjct: 43 CKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMG 102
Query: 344 NVPVCNAILQ--------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+ +++++ ++A +FR M A PD+ TF V+ AC A+L G
Sbjct: 103 THYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAV---PDNFTFPFVLSACTKSAALTEGF 159
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H I+K G D+FV N L+ Y +CG + R +F+ M + +VVSW+SLI GYA+ G
Sbjct: 160 QVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRG 219
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
C +EA+ LF M G+RPN VT+VGV++AC+ + ++ G Q+ + E +
Sbjct: 220 CYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCI-GELELEVNALMV 278
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ +VD+ + G + +A ++ D ++V++ +++++ G
Sbjct: 279 NALVDMYMKCGAIDKARKIFDE-CVDKNLVLYNTIMSNYVRQG 320
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 194/600 (32%), Positives = 297/600 (49%), Gaps = 72/600 (12%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDH-ILSSKCQPDAVLHNHILNMYGKC 128
L T+ R+ A + +C L+LGR +H +LS L NH++ MY C
Sbjct: 12 LDTATSLRL-----AAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHC 66
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
+ A +FD MP+ N+VSWT +++G +QN A+ + M ++GL+P QF S
Sbjct: 67 ADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAA 126
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
RA + L G QLH ++ + L + L MY+K +++A VF + +KD
Sbjct: 127 RAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAV 186
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI- 307
+ W +I G A N A+ F +M L+
Sbjct: 187 A----------------------------WTAMIDGYAKNGNLEAAVIAFRDMRREGLVG 218
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA----------- 356
D + S+L A + IHS ++K GF V V NA+ A
Sbjct: 219 ADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARV 278
Query: 357 -----GEL---------------------FRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
G L +F + +P+ TF+ ++ CA A
Sbjct: 279 VKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQAL 338
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
LE G QLH ++KT L D FV + L+DMY KCG + + +LF +E ++W++ I
Sbjct: 339 LEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINV 398
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
AQ G G EA++ F RM SSG+RPNH+T V +LTACSH GLV+EGL+ + M++ +GI P
Sbjct: 399 LAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEP 458
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
E SC++D+ RAGR+ EAE FI +M + W SLL +C+ GN ++G+ AA+N+
Sbjct: 459 KGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNM 518
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
+K++P N+ V L IYAS G+WE+V + M++ ++K+PG SW++ K H G++
Sbjct: 519 MKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSE 578
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 159/382 (41%), Gaps = 39/382 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + LL +A V D ++ W + K A++AF ++
Sbjct: 162 DMYSKSGLLVEACRVFDQMPQKDAVAWT-AMIDGYAKNGNLEAAVIAFRDMRREGLVGAD 220
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA-RMVF 138
++SA L+ L R +H ++ S + + + N + +MY K +++A R+V
Sbjct: 221 QHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVK 280
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+ NVVS T++I G + A+ +++++ + G+ P++FTF S+I+ C+ +
Sbjct: 281 IDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLE 340
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G QLHA VIK+ S + L+ MY K I
Sbjct: 341 QGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLI-------------------------- 374
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ +F E+E +WN I +A + EA+ F M + P+ +T SLL
Sbjct: 375 --SLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLT 432
Query: 319 ACTSP------LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTK 372
AC+ L + M+ H I KG + + C + +AG L + K
Sbjct: 433 ACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYS---CIIDMYGRAGRLDEAEKFIGEMPVK 489
Query: 373 PDHITFNDVMGACAAMASLEMG 394
P+ + ++GAC + E+G
Sbjct: 490 PNAYGWCSLLGACRMRGNKELG 511
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 280/532 (52%), Gaps = 35/532 (6%)
Query: 100 RKVHDHIL-SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
+K+H IL P+ L ++ Y CG R +FDE+ +NVV + MI
Sbjct: 55 KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN 114
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
NG A+ ++ M G PD +T+ +++ACS + +G Q+H V+K +L
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYI 174
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N L++MY K W LD AR V +EM ++ SW
Sbjct: 175 GNGLVSMYGK-------------------CKW---------LDAARRVLDEMPGRDMVSW 206
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N+++AG A N+A+ L EM D +L PD T+ SLL A T+ S + + +K
Sbjct: 207 NSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN-TSCDNVLYVKDMFVK 265
Query: 339 ---KGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
K S NV + + E L+ M +PD ++ + V+ AC +++ +G
Sbjct: 266 LKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLG 325
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
++H Y+ + L ++ + N L+DMY KCG L AR +F+ M DVVSW+S+I Y
Sbjct: 326 RRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMS 385
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G G++A+ LF++MR SG P+ + V VL ACSH GLV+EG + +M EYGI P E
Sbjct: 386 GQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEH 444
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+C+VDLL RAG++ EA QM + + VW SLL++C+ + ++++ AA+++ ++
Sbjct: 445 YNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLA 504
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
P S VLL NIYA +G+W++V + M +G++K+PG S +EI ++
Sbjct: 505 PEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYT 556
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 185/403 (45%), Gaps = 53/403 (13%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD+I D + + S LY +AL+ F + N F TY ++ ACS +
Sbjct: 94 FDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQ-GFYPDNYTYPCVLKACSVSGN 152
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L +G ++H ++ + + N +++MYGKC L+ AR V DEMP R++VSW +M+AG
Sbjct: 153 LWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAG 212
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+QNG+ N A++L +M L PD T GS++ A + C + + +K + S
Sbjct: 213 YAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV-LYVKDMFVKLKEKS- 270
Query: 216 LISQNALIAMYTK-------FDRIL---------DAWNVFSSIA---------------- 243
LIS N +IA+Y D L DA ++ S +
Sbjct: 271 LISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHE 330
Query: 244 -------RKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
R ++ ++ID ++K L AR VF++M ++ SW ++I+ +
Sbjct: 331 YVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKD 390
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-- 351
A++LF +M D PD + S+L AC+ + +G + + + G + N +
Sbjct: 391 AVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVD 450
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
L +AG++ + L +P+ + ++ AC +S+ +
Sbjct: 451 LLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIA 493
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/636 (30%), Positives = 321/636 (50%), Gaps = 98/636 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQN------NT------------NFRIRPS---------T 82
L + CK L++ ALV F+ L N NT NF +R + T
Sbjct: 119 LMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDDALNFALRMNFTGVAFDAVT 178
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+++ CS G ++H IL + + N ++ MY +C L +AR VFDEM
Sbjct: 179 CTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMR 238
Query: 143 QRNVVSWTAMIAGCSQNGQEN-AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+++VSW AM++G +Q G AI ++++ML+ G+ D +F I AC LGR
Sbjct: 239 NKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGR 298
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H+ +K + +H+ N LI+ Y+K + I DA VF SI +
Sbjct: 299 QIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDR---------------- 342
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N+ SW T+I+ + +A SLF+EM + P+ +T L+ A T
Sbjct: 343 ------------NVVSWTTMIS-----ISEEDATSLFNEMRRDGVYPNDVTFVGLIHAIT 385
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFS------------ 364
+ +G IH +K F S + V N+++ A + ++F
Sbjct: 386 MKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNS 445
Query: 365 ------------------LMLASQTKPDHITFNDVMGACAAMASLEM--GTQLHCYIMKT 404
L +++P+ TF V+ + A+ ++ M G + H +I+K
Sbjct: 446 LISGYAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKL 505
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
GL + V + L+DMY K GS+ + +F+ + V+W+++I +A+ G E + LF
Sbjct: 506 GLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLF 565
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+ M GV+P+ +T + V+TAC G+V+ G QL+ M ++ I P+ E S +VD+L R
Sbjct: 566 KDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGR 625
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AGR+ EAE+F+ Q+ + V +SLL +C+ HGNVD+ KR A+++++++P S + VL+
Sbjct: 626 AGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLM 685
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
N+YA G+WE+VA++ M+ERGVRK G SW+++
Sbjct: 686 SNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDV 721
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 243/553 (43%), Gaps = 95/553 (17%)
Query: 56 KQNLYNEALVAFDF-LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
++NL EAL F LQ I T A ++ AC +LG ++H +SS
Sbjct: 55 RRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCG--DSKLGCQIHAFAISSGFISH 112
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ N ++NMY K G + A +VF+ + ++VSW +++G ++ + A+ ++M
Sbjct: 113 VTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS---DDALNFALRMNF 169
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
+G+ D T +++ CS G QLH+ ++K + NALI MY++ R+++
Sbjct: 170 TGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVE 229
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
A VF + KD+ SW +M+ G+++ ++ EA
Sbjct: 230 ARRVFDEMRNKDLVSWNAMLSGYAQ---------------------------EGNSGLEA 262
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ- 353
+ +F EM + D ++ + AC G QIHS +K G+ ++V VCN ++
Sbjct: 263 ILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLIST 322
Query: 354 -------HQAGELFR-----------------------LFSLMLASQTKPDHITFNDVMG 383
A +F LF+ M P+ +TF ++
Sbjct: 323 YSKCEDIEDAKLVFESIIDRNVVSWTTMISISEEDATSLFNEMRRDGVYPNDVTFVGLIH 382
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
A +E G +H +KT ++ V N L+ MY K S+ + ++F + +++S
Sbjct: 383 AITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIIS 442
Query: 444 WSSLIVGYAQFGCGEEALKLFRR--MRSSGVRPNHVTLVGVLTACS-------------H 488
W+SLI GYAQ G +EAL+ F M S RPN T VL++ + H
Sbjct: 443 WNSLISGYAQNGLWQEALQTFLSALMES---RPNEFTFGSVLSSIASAEAISMRHGQRCH 499
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+++ GL I+ S ++D+ A+ G + E+ ++ ++ V W
Sbjct: 500 SHILKLGLNTNPIVS------------SALLDMYAKRGSICESLGVFSETPLKNE-VAWT 546
Query: 549 SLLASCKTHGNVD 561
+++++ HG+ +
Sbjct: 547 AIISAHARHGDYE 559
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 193/463 (41%), Gaps = 85/463 (18%)
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP--DQFTFGSIIRACSGLC 195
D+ PQ + S + + A++L+ + LQ G + DQ T +++AC G
Sbjct: 35 LDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDS 94
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK---FDRILDAWNVFSSIARKDITSWGS 252
LG Q+HA I S SH+ N+L+ MY K FDR A VF ++ DI SW +
Sbjct: 95 --KLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDR---ALVVFENLNNPDIVSWNT 149
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
++ GF + D +A++ M + D +T
Sbjct: 150 VLSGFQRSD-------------------------------DALNFALRMNFTGVAFDAVT 178
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------- 353
++L C+ G Q+HS I+K G V V NA++
Sbjct: 179 CTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMR 238
Query: 354 --------------HQAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
Q G E +F ML K DH++F + AC E+G
Sbjct: 239 NKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGR 298
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H +K G V V N L+ Y KC + A+ +F + D +VVSW+++I
Sbjct: 299 QIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISE--- 355
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
E+A LF MR GV PN VT VG++ A + LVEEG ++ + + +
Sbjct: 356 --EDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCV-KTSFLSELNVS 412
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++ + A+ + ++ ++ + +I+ W SL++ +G
Sbjct: 413 NSLITMYAKFESMSDSMKVFEELNY-REIISWNSLISGYAQNG 454
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 261/495 (52%), Gaps = 38/495 (7%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G+++ A +F ++ Q ++ W MI G +Q + A+ LY QM G+ PD+FTF ++
Sbjct: 61 GTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVL 120
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+AC+ L V LG +H V+KS S+ +N LI + + A +F + A++++
Sbjct: 121 KACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVV 180
Query: 249 SWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
W ++ G++ KLD AR +F+EM +L SWN +I A +A LF E+ ++
Sbjct: 181 PWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKD 240
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSL 365
++ N + +L E +F
Sbjct: 241 VVT----------------------------------WNAMIAGYVLSRLNKEALEMFDA 266
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCG 424
M +PD +T ++ A A + LE+G ++H I L V + N L+DMY KCG
Sbjct: 267 MRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCG 326
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
S+G+A E+F M D SW+S+I G A G EE++ LF+ M ++PN +T V VL
Sbjct: 327 SIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLV 386
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
ACSH G V EG + +M+N + I P + C+VD+L RAG + EA DFI+ M + +
Sbjct: 387 ACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNA 446
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
++W++LL +C+ HG+V++G+RA E +LK+ S VLL NIYAS G+W+ V ++ M
Sbjct: 447 IIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLM 506
Query: 605 KERGVRKVPGQSWIE 619
+ GV+K G S I+
Sbjct: 507 DDGGVKKKVGHSLID 521
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 186/373 (49%), Gaps = 21/373 (5%)
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
I++ N +S+ R+ I ++ G +D+A +F ++ P++ WNT+I G A
Sbjct: 37 IVNGLNSTTSVLRELIFVSAIVVSG--TMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKP 94
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
A+SL+++M +R + PD T +L ACT + G IH ++K GF SN V N +
Sbjct: 95 ATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTL 154
Query: 352 LQHQA--GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI-MKTGLAL 408
+ A G+L +L AS K + + ++ + A L++ QL + MK
Sbjct: 155 IYFHANCGDLATARALFDAS-AKREVVPWSALTAGYARRGKLDVARQLFDEMPMK----- 208
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ N ++ Y K G + AR+LF+ + DVV+W+++I GY +EAL++F MR
Sbjct: 209 DLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMR 268
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN----EYGIIPTRERRSCVVDLLAR 524
G RP+ VT++ +L+A + +G +E G +++R + + + ++ + + ++D+ A+
Sbjct: 269 DLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLS----NALIDMYAK 324
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVL 583
G + A + M D W S++ HG+ + + +L++ N V
Sbjct: 325 CGSIGNALEVFQGMR-KKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVA 383
Query: 584 LCNIYASSGKWEE 596
+ + +GK E
Sbjct: 384 VLVACSHAGKVRE 396
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 157/326 (48%), Gaps = 38/326 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ L + + L + R++ D + D V N ++ Y K G +E AR +FDE+P
Sbjct: 182 WSALTAGYARRGKLDVARQLFDEM----PMKDLVSWNVMITAYAKHGEMEKARKLFDEVP 237
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+++VV+W AMIAG + A+E++ M G PD T SI+ A + L + +G++
Sbjct: 238 KKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKK 297
Query: 203 LHAHVIKSEHGS-HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H + G ++ NALI MY K I +A VF + +KD +S
Sbjct: 298 IHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSS------------ 345
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
WN+II G+A +A E+++LF EM ++ P+ +T ++L AC+
Sbjct: 346 ----------------WNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACS 389
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPV----CNAILQHQAGELFRLFSLMLASQTKPDHIT 377
+ +G +++ ++K F + C + +AG L F + + +P+ I
Sbjct: 390 HAGKVREG-RMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAII 448
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMK 403
+ ++GAC +E+G + + ++K
Sbjct: 449 WRTLLGACRVHGDVELGRRANEQLLK 474
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 175/394 (44%), Gaps = 66/394 (16%)
Query: 75 NFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N +RP T++ ++ AC+ L ++LG +H +L S Q + + N ++ + CG L
Sbjct: 106 NRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLA 165
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
AR +FD +R VV W+A+ AG ++ G+ + A +L+ +M M D
Sbjct: 166 TARALFDASAKREVVPWSALTAGYARRGKLDVARQLFDEM----PMKD------------ 209
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L+S N +I Y K + A +F + +KD+ +W +
Sbjct: 210 -----------------------LVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNA 246
Query: 253 MIDGF--SKLDF-ARTVFNEM----ESPNLASWNTIIAGVASCSNANEAMSLFSEMGD-- 303
MI G+ S+L+ A +F+ M + P+ + +I++ A + + + D
Sbjct: 247 MIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMC 306
Query: 304 ----RELIPDGLTVRSLLCACT-SPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAG 357
L+ + L C + L ++QGM+ KK S N + L A
Sbjct: 307 CGDLSVLLSNALIDMYAKCGSIGNALEVFQGMR------KKDTSSWNSIIGGLALHGHAE 360
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG-- 415
E LF ML + KP+ ITF V+ AC+ + G +++ +MK ++ + +
Sbjct: 361 ESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREG-RMYFNLMKNVFKIEPNIKHYGC 419
Query: 416 LMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++D+ + G L A + + ME +P+ + W +L+
Sbjct: 420 MVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLL 453
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
L++ M +PD TF+ V+ AC ++ +++G +H ++K+G + FV N L+ +
Sbjct: 100 LYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHA 159
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
CG L +AR LF+ +VV WS+L GYA+ G + A +LF M + +V
Sbjct: 160 NCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNV---- 215
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
++TA + G +E+ +L+ + + + V+ L + E D + +
Sbjct: 216 MITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEAL--EMFDAMRDLGQR 273
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV--LLCNIYASSGKWEEVAR 599
D V S+L++ G++++GK+ +I + + + L+ L ++YA G
Sbjct: 274 PDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGS------ 327
Query: 600 LMGSMKE--RGVRKVPGQSWIEI 620
+G+ E +G+RK SW I
Sbjct: 328 -IGNALEVFQGMRKKDTSSWNSI 349
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 202/649 (31%), Positives = 336/649 (51%), Gaps = 90/649 (13%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS---A 89
+V D R W+ L SSLC + AL AF + + + PS++ L+S A
Sbjct: 150 KVFDRISERNQVSWN-SLISSLCSFEKWEMALEAFRCMLDED---VEPSSFT-LVSVALA 204
Query: 90 CSSL---RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
CS+ L +G++VH + L K + ++ + N ++ MYGK G L ++++ R++
Sbjct: 205 CSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDL 263
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
V+W +++ QN Q A+E +M+ G+ PD FT S++ ACS L + G++LHA+
Sbjct: 264 VTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAY 323
Query: 207 VIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+K+ + +AL+ MY ++L VF DG F R
Sbjct: 324 ALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVF---------------DGM----FDRK 364
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLCACTSPL 324
+ WN +I G A EA+ LF EM + L+ + T+ ++ AC
Sbjct: 365 I---------GLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG 415
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL---FRLFS--------------- 364
+ + IH +++K+G + V NA++ + G++ R+F
Sbjct: 416 AFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIIT 475
Query: 365 ------------LML-------------ASQT--KPDHITFNDVMGACAAMASLEMGTQL 397
LML AS+ KP+ IT ++ +CAA+++L G ++
Sbjct: 476 GYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEI 535
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H Y +K LA DV V + L+DMY KCG L +R++F+ + +V++W+ +++ Y G
Sbjct: 536 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNS 595
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
++A+ + R M GV+PN VT + V ACSH G+V EGL+++ M+ +YG+ P+ + +C
Sbjct: 596 QDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYAC 655
Query: 518 VVDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
VVDLL RAGRV EA IN + + D W SLL +C+ H N+++G+ AA+N+++++P
Sbjct: 656 VVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPN 715
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ VLL NIY+S+G W + + +MK +GVRK PG SWIE ++H
Sbjct: 716 VASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVH 764
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 148/573 (25%), Positives = 258/573 (45%), Gaps = 97/573 (16%)
Query: 46 WDFDLFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKV 102
W DL S + NL EA++ + D + I+P +A L+ A + L+ + LG+++
Sbjct: 60 WWIDLLRSKVRSNLLREAVLTYIDMIV----LGIKPDNFAFPALLKAVADLQDMDLGKQI 115
Query: 103 HDHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQ 161
H H+ D+V + N ++N+Y KCG VFD + +RN VSW ++I+ +
Sbjct: 116 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 175
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC---VGLGRQLHAHVI-KSEHGSHLI 217
A+E + ML + P FT S+ ACS + +G+Q+HA+ + K E S +I
Sbjct: 176 WEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII 235
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS 277
N L+AMY K KL ++ + E +L +
Sbjct: 236 --NTLVAMYGKM----------------------------GKLASSKVLLGSFEGRDLVT 265
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
WNT+++ + EA+ EM + PDG T+ S+L AC+ L G ++H+Y +
Sbjct: 266 WNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYAL 325
Query: 338 KKG--------------------------------FYSNVPVCNAILQHQAGELFRLFSL 365
K G F + + NA++ A + +L
Sbjct: 326 KNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEAL 385
Query: 366 MLASQTK------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+L + + + T V+ AC + +H +++K GL D FV N LMDM
Sbjct: 386 LLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDM 445
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM---------RSS 470
Y + G + A+ +F MED D+V+W+++I GY E+AL + +M R+S
Sbjct: 446 YSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERAS 505
Query: 471 GV--RPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAG 526
V +PN +TL+ +L +C+ + + +G ++ Y I N + S +VD+ A+ G
Sbjct: 506 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV---GSALVDMYAKCG 562
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ + +Q+ +++ W ++ + HGN
Sbjct: 563 CLQMSRKVFDQIPI-RNVITWNVIVMAYGMHGN 594
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 283/522 (54%), Gaps = 31/522 (5%)
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE-NAAIELYVQMLQ 174
V N + + G + AR VFD MP+R+VVSW A++ + G++ AA L+ M
Sbjct: 8 VRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRLFDDMPS 67
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
++ ++ S++ C + A + ++ S NA++A + R+ D
Sbjct: 68 RNVI----SWNSVVAGCLAHGDLDAASAYFARAPRR----NVASWNAMLAGLVRLGRMDD 119
Query: 235 AWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
AW +F + ++++ S+ +M+DG ++ + AR VF+ M NL SW +I G +
Sbjct: 120 AWALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMF 179
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY-------QGMQIHSYIIKKGFYS- 343
+EA LF M D+ ++ ACT+ ++ Y ++ I K S
Sbjct: 180 DEARKLFEAMPDKNVV-----------ACTAMITGYCKDGDVESARRLFDGIPVKDVISW 228
Query: 344 NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
N + + E +L +M KPDH T ++ AC+A+A L G H K
Sbjct: 229 NAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRSTHAVATK 288
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
T L N LM MY KCG++G + +F ++ D+VSW+++I YAQ G ++A+ L
Sbjct: 289 TMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGKYQKAIAL 348
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F M + G+ PN +T++ +L+AC HVG V + L+L+ +M ++Y I P+ E +CVVD+L
Sbjct: 349 FHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYAISPSAEHYACVVDILG 408
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG++ +A +I +M F+ + VW +LL + KTHGNV +G+ AA+ +++ D +S V+
Sbjct: 409 RAGQLEKACSYIKKMPFEAERNVWGALLGASKTHGNVQLGELAAKMLVQSDSVSSGPYVM 468
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L NIYA++G W EV R+ G MKE+GV+K PG SW EI K++
Sbjct: 469 LSNIYAAAGMWGEVNRVRGQMKEKGVKKQPGYSWTEIANKVN 510
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 163/348 (46%), Gaps = 17/348 (4%)
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK----LDFARTVFNEME 271
L+ N I + + A VF ++ R+D+ SW +++ + L AR +F++M
Sbjct: 7 LVRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRLFDDMP 66
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
S N+ SWN+++AG + + + A + F+ R + + ++L +
Sbjct: 67 SRNVISWNSVVAGCLAHGDLDAASAYFARAPRRNVA----SWNAMLAGLVRLGRMDDAWA 122
Query: 332 IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ + ++ S + + + + GE+ R + A + + +++ ++ A
Sbjct: 123 LFGEMPQRNVVSYTTMVDGLARR--GEVARAREVFDAMPER-NLVSWAAMITGYVENAMF 179
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+ +L + +V ++ Y K G + SAR LF+ + DV+SW+++I GY
Sbjct: 180 DEARKLFEAMPDK----NVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGY 235
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G GEEA+KL M GV+P+H TL+ +LTACS + L+ +G + + + +
Sbjct: 236 VHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRSTHAVATKTM-LESS 294
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++ + ++ G V E+E + DIV W +++A+ HG
Sbjct: 295 TSFCNALMTMYSKCGNVGESELVFMNLKI-QDIVSWNTIIAAYAQHGK 341
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 35 VDSFLRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
V+S R FD I D+ S + N + E + + + +T +++A
Sbjct: 210 VESARRLFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTA 269
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
CS+L L+ GR H + + N ++ MY KCG++ ++ +VF + +++VSW
Sbjct: 270 CSALALLRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSW 329
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+IA +Q+G+ AI L+ +M GL+P+ T S++ AC
Sbjct: 330 NTIIAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSAC 371
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 178/593 (30%), Positives = 297/593 (50%), Gaps = 54/593 (9%)
Query: 80 PSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDAR 135
P T+ L+ C S+ LQ +VH + + VL N ++ + G + AR
Sbjct: 37 PPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYAR 93
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FDE+P+ N+ W MI G S+ + LY++ML+ G+ PD++TF + + +
Sbjct: 94 RLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 153
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ GRQLH HV+K ++ AL+ MY ++ A VF + D+ +W +I
Sbjct: 154 ALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIIS 213
Query: 256 GFSKL---DFARTVFNEMESP--------------------------------------- 273
++K+ + +R +F ME
Sbjct: 214 AYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 273
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
NL N +I A C + A+ +F M +R++I + +++ T+ +
Sbjct: 274 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDII----SWTTIVSGFTNLGEIDVARNYF 329
Query: 334 SYIIKKGFYSNVPVCNA-ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ +K + S + + I ++ E LF M A+ KPD T V+ ACA + +LE
Sbjct: 330 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 389
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G + YI + + D+FV N L+DMY KCG + A +F M D +W+++IVG A
Sbjct: 390 LGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLA 449
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G GE+AL +F M + + P+ +T +GVL+AC+H GLV++G + + M +++GI P
Sbjct: 450 VNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNI 509
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
C+VDLLARAGR+ EA + I M + +VW +LLA C+ + D+ + + IL+
Sbjct: 510 AHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE 569
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++P N A VLLCNIYA+ +W ++ L M ++G++K PG S IE+ ++H
Sbjct: 570 LEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVH 622
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 203/461 (44%), Gaps = 79/461 (17%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ LC LD A V D + W+ + S+ K + E+ F +++ ++ P+
Sbjct: 184 YLLCGQLDTARGVFDVCPKADVITWNM-IISAYNKVGKFEESRRLFLVMEDK---QVLPT 239
Query: 82 TYADLI--SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T ++ SACS L+ L+ G+KVH ++ + K + + VL N +++MY CG ++ A +F
Sbjct: 240 TVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 299
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENA-------------------------------AIEL 168
M R+++SWT +++G + G+ + A+EL
Sbjct: 300 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALEL 359
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ M + + PD+FT S++ AC+ L + LG + ++ +++ + L +NALI MY K
Sbjct: 360 FRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFK 419
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ A ++F ++++D +W +M I G+A
Sbjct: 420 CGDVDKAESIFREMSQRDKFTWTAM----------------------------IVGLAVN 451
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPV 347
+ +A+ +FS M ++PD +T +L ACT + +G + + + G N+
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511
Query: 348 --CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
C L +AG L + ++ K + I + ++ C +M ++K
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEM----VVKQI 567
Query: 406 LALD-----VFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
L L+ V+V+ L ++Y C REL M D +
Sbjct: 568 LELEPDNGAVYVL--LCNIYAACKRWNDLRELRQMMMDKGI 606
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 287/548 (52%), Gaps = 18/548 (3%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS-LEDARMVFDEMPQR 144
L + C +LR L ++VH I++ P + L+ + L A+ +F +
Sbjct: 102 LFNPCKTLRHL---KQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNP 158
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+ ++I S + A+ LY MLQSGL PD T+ +I+AC+ G +H
Sbjct: 159 PPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVH 218
Query: 205 AHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK--- 259
HV+KS E S+++S +LI +Y + A +F+ + +D+ SW +MIDG+ K
Sbjct: 219 THVVKSGFECDSYIVS--SLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVE 276
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP-DGLTVRSLLC 318
+ AR VF+ M ++ SWNT+I G A +EA LF EM +R L+ + + + C
Sbjct: 277 MGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKC 336
Query: 319 A-CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
L+ M + + C + E LF M A KP T
Sbjct: 337 GNVEDAFGLFSEMPCRDVVSWNSMLACYAQCG-----KPNEALALFDQMRAVGVKPTEAT 391
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
++ ACA + +L+ G LH YI + ++ V L+DMY KCG + A ++FN ME
Sbjct: 392 VVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME 451
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DV++W+++I G A G +EA +LF+ M+ +GV PN +T V +L+ACSH G+V+EG +
Sbjct: 452 SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQK 511
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
L M + YGI P E CV+DLLARAG + EA + I M + + +LL C+ H
Sbjct: 512 LLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIH 571
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
GN ++G+ + ++ + P +S +LL NIYA++ KW++ ++ MK G+ KVPG S
Sbjct: 572 GNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSV 631
Query: 618 IEIQTKIH 625
IE++ +H
Sbjct: 632 IELKGMVH 639
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
NEAL FD ++ + +T L+SAC+ L +L G +H +I ++ + ++++
Sbjct: 371 NEALALFDQMRA-VGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTA 429
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++MY KCG + A VF+ M ++V++W +IAG + +G A +L+ +M ++G+ P+
Sbjct: 430 LVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPN 489
Query: 181 QFTFGSIIRACSGLCCVGLGRQL 203
TF +I+ ACS V G++L
Sbjct: 490 DITFVAILSACSHAGMVDEGQKL 512
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 305/613 (49%), Gaps = 98/613 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHIL 107
L + + + + L F L R+ P + I +C+SLR+L G+++H
Sbjct: 75 LIHAFARSHHFPHVLTTFSHLHP---LRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAA 131
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ--------- 158
+S D+++ + + +MY KC + DAR +FD MP R+VV W+AMIAG S+
Sbjct: 132 ASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKE 191
Query: 159 --------------------------NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
NG + A+ ++ ML G PD T ++ A
Sbjct: 192 LFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVG 251
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L V +G Q+H +VIK GS +A++ MY K + K+++
Sbjct: 252 CLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCV------------KEMSR--- 296
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
VF+E+E + S N + G++ + A+ +F++ D+++ + +T
Sbjct: 297 -------------VFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVT 343
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTK 372
S++ +C+ G + E LF M A +
Sbjct: 344 WTSIIASCSQ-----NGKDL-------------------------EALELFRDMQAYGVE 373
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ +T ++ AC +++L G ++HC+ ++ G+ DV+V + L+DMY KCG + AR
Sbjct: 374 PNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRC 433
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ M ++VSW++++ GYA G +E +++F M SG +P+ VT VL+AC+ GL
Sbjct: 434 FDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLT 493
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
EEG + Y M E+GI P E +C+V LL+R G++ EA I +M F+ D VW +LL+
Sbjct: 494 EEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
SC+ H N+ +G+ AAE + ++PTN +LL NIYAS G W+E R+ MK +G+RK
Sbjct: 554 SCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKN 613
Query: 613 PGQSWIEIQTKIH 625
PG SWIE+ K+H
Sbjct: 614 PGYSWIEVGHKVH 626
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 120/241 (49%), Gaps = 8/241 (3%)
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ---GMQIHSYIIKK 339
+ AS S A +A +L + L D SLL + LSL + + S++
Sbjct: 11 SSTASLSQARQAHALILRL---NLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHP 67
Query: 340 GFYSNVPVCNAILQ-HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+S + +A + H + FS + + PD + +CA++ +L+ G QLH
Sbjct: 68 TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLH 127
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+ +G D V + L MY+KC + AR+LF+ M D DVV WS++I GY++ G E
Sbjct: 128 AFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVE 187
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA +LF MRS GV PN V+ G+L + G +E + ++R+M + G P SCV
Sbjct: 188 EAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQ-GFWPDGSTVSCV 246
Query: 519 V 519
+
Sbjct: 247 L 247
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 168/409 (41%), Gaps = 108/409 (26%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
S + T+ + + P L S++++I A + ++ FS + LIPD + S
Sbjct: 51 LSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSA 110
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPV----------CNAILQHQ----------- 355
+ +C S +L G Q+H++ GF ++ V C+ IL +
Sbjct: 111 IKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDV 170
Query: 356 -------AG--------ELFRLFSLMLASQTKPDHITFNDVMG----------------- 383
AG E LF M + +P+ +++N ++
Sbjct: 171 VVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRM 230
Query: 384 ------------------ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG- 424
A + + +G Q+H Y++K GL D FV++ ++DMY KCG
Sbjct: 231 MLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGC 290
Query: 425 --------------SLGS----------------ARELFNFMEDP----DVVSWSSLIVG 450
+GS A E+FN +D +VV+W+S+I
Sbjct: 291 VKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIAS 350
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
+Q G EAL+LFR M++ GV PN VT+ ++ AC ++ + G +++ GI
Sbjct: 351 CSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIH-CFSLRRGIFD 409
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
S ++D+ A+ GR+ A ++M+ ++V W +++ HG
Sbjct: 410 DVYVGSALIDMYAKCGRIQLARRCFDKMS-ALNLVSWNAVMKGYAMHGK 457
>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 631
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 194/650 (29%), Positives = 311/650 (47%), Gaps = 111/650 (17%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S K+ EAL+ F + N A +ISAC + + +++H + S
Sbjct: 12 VVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGG-SIDKQMHGFAVKS 70
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + ++++Y K G++++AR+VFD + +++ V+WT +I C + G+ +++L+
Sbjct: 71 GFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKRGRSEVSLQLF 130
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
QM ++ ++PD + S++ ACS L V G+Q+H HV++ + N LI YTK
Sbjct: 131 SQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFVNVLIDFYTKS 190
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
K+ AR +F+ M N+ SW +IAG S
Sbjct: 191 ----------------------------GKVQSARKLFDGMADRNVISWTAMIAGYMQNS 222
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS------ 343
EA+ LF EM PDG S+L +C S +L G Q+H+Y IK S
Sbjct: 223 FDREAVKLFIEMTRLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQN 282
Query: 344 -------------------------NVPVCNAILQ-----HQAGELFRLFSLMLASQTKP 373
NV NA+++ Q E LF M P
Sbjct: 283 GLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSP 342
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+TF ++GA A +++LE+G Q+H I K G+++++F + L+D Y KC L AR +F
Sbjct: 343 SFLTFVSLLGASATLSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVF 402
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV---- 489
+ M + D+V W++++ GY Q EEALKL+ ++ S +PN VT + TA S++
Sbjct: 403 DKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQ 462
Query: 490 -----------------------------------------GLVEEGLQLYRIMQNEYGI 508
G V++GL + M ++ I
Sbjct: 463 HGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMP-KFSI 521
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
P E +CVV LL R+G+++EA++FI +M + + VVW+SLL++C+ GNV++GK AAE
Sbjct: 522 KPGTEHYACVVSLLGRSGKLYEAKEFIEKMPTEPEAVVWRSLLSACRVSGNVELGKYAAE 581
Query: 569 NILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+ ID T+S + LL NIYAS G W +V ++ M GV K G SWI
Sbjct: 582 KAISIDSTDSGSYTLLSNIYASKGMWVDVKKVRERMDIAGVVKEAGHSWI 631
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 219/448 (48%), Gaps = 68/448 (15%)
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGL 199
MP+RN++SW+++++ S+ G A+ +++ + P+++ S+I AC
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACV------- 53
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
Q+ + K HG A+ + FDR NV+ + D+ + G ID
Sbjct: 54 --QVGGSIDKQMHG---------FAVKSGFDR-----NVYVGTSLVDLYAKGGNIDE--- 94
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
AR VF+ + + +W TII + ++ LFS+M + ++PDG + S+L A
Sbjct: 95 ---ARLVFDGLLEKSAVTWTTIITACVKRGRSEVSLQLFSQMRETNVVPDGYILSSVLGA 151
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF----------- 360
C+ + G QIH +++++G +V N ++ A +LF
Sbjct: 152 CSQLEFVQGGKQIHGHVLRRGIEIDVSFVNVLIDFYTKSGKVQSARKLFDGMADRNVISW 211
Query: 361 -----------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+LF M +PD ++ +C ++ +LE+G Q+H Y +K
Sbjct: 212 TAMIAGYMQNSFDREAVKLFIEMTRLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIK 271
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+ D+F+ NGL+DMY KCGSL AR++F+ M +VVS+++LI GY+ EA+ L
Sbjct: 272 GNVESDIFLQNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNL 331
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
FR MR + P+ +T V +L A + + +E G Q++ ++ ++GI S ++D +
Sbjct: 332 FREMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALI-TKFGISMEIFAGSALIDFYS 390
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+ + +A ++M + DIVVW ++L
Sbjct: 391 KCSCLMDARLVFDKMT-EKDIVVWNAML 417
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHV-GLVE 493
M + +++SWSS++ Y++ G EEAL +F R PN L V++AC V G ++
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSID 60
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ + + + + G + +VDL A+ G + EA + + + V W +++ +
Sbjct: 61 KQMHGFAV---KSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGL-LEKSAVTWTTIITA 116
Query: 554 CKTHGNVDV 562
C G +V
Sbjct: 117 CVKRGRSEV 125
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 294/557 (52%), Gaps = 77/557 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +L+ Y K G L AR VF EM ++ V++ AM+ GCS+ G A++L+ M ++G+
Sbjct: 174 NTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIP 233
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
FTF SI+ +G+ + LG Q+HA V++S ++ N+L+ Y+K D
Sbjct: 234 ATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCD-------- 285
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
LD R +F+EM + S+N IIA A A + LF
Sbjct: 286 --------------------CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLF 325
Query: 299 SEMG----DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-- 352
EM DR+++P ++L S ++ G QIH+ ++ G S + NA++
Sbjct: 326 REMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDM 381
Query: 353 ------------------------------------QHQAGELFRLFSLMLASQTKPDHI 376
QH+ E +LFS M + +PD
Sbjct: 382 YSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHE--EALQLFSDMRRAGLRPDRA 439
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
TF+ ++ A +++A + +G QLH Y++++G VF + L+DMY KCG L A F+ M
Sbjct: 440 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 499
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ + +SW+++I YA +G + A+K+F M G P+ VT + VL ACSH GL +E +
Sbjct: 500 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECM 559
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ + +M+++Y I P +E +CV+D L R G + + + +M F D ++W S+L SC+
Sbjct: 560 KYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRI 619
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
HGN ++ + AA+ + ++PT++ V+L NIYA +G+WE+ A + M++RGVRK G S
Sbjct: 620 HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYS 679
Query: 617 WIEIQTKIHA-SGNDIS 632
W+EI+ KI++ + ND++
Sbjct: 680 WVEIKQKIYSFASNDLT 696
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 216/493 (43%), Gaps = 79/493 (16%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N IL+ Y G L A+ +F P RN +WT M+ + G+ + A+ L+ ML G++
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD+ T +++ C V LH IK +H+ N L+ Y K + A V
Sbjct: 138 PDRVTVTTVLNLPG--CTVP---SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + KD ++ +M+ G SK +A+ LF
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGL----------------------------HTQALQLF 224
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG- 357
+ M + T S+L L G Q+H+ +++ NV V N++L +
Sbjct: 225 AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284
Query: 358 ----ELFRLFSLMLASQTKPDHITFNDVMGA-----CAA--------------------- 387
++ RLF M + D++++N ++ A CAA
Sbjct: 285 DCLDDMRRLFDEM----PERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 340
Query: 388 ---------MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ + +G Q+H ++ GLA + + N L+DMY KCG L +A+ F+ +
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 400
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
+SW++LI GY Q G EEAL+LF MR +G+RP+ T ++ A S + ++ G QL
Sbjct: 401 KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + G + S +VD+ A+ G + EA ++M + + + W +++++ +G
Sbjct: 461 HSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISAYAHYG 518
Query: 559 NVDVGKRAAENIL 571
+ E +L
Sbjct: 519 EAKNAIKMFEGML 531
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 28/239 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
YA ++S SL + +G+++H ++ + +L N +++MY KCG L+ A+ F
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+++ +SWTA+I G QNGQ A++L+ M ++GL PD+ TF SII+A S L +GLGRQ
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
LH+++I+S + S + S + L+ MY K + +A F
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF----------------------- 496
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+EM N SWN +I+ A A A+ +F M PD +T S+L AC+
Sbjct: 497 -----DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
L AR +F++M N+ S N I++ +S + A LF R + +R+ A
Sbjct: 59 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAA 118
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ + LF ML PD +T
Sbjct: 119 G----------------------------------RTSDALSLFRAMLGEGVIPDRVTVT 144
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V+ LH + +K GL VFV N L+D Y K G L +AR +F M D
Sbjct: 145 TVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDK 199
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D V+++++++G ++ G +AL+LF MR +G+ H T +LT + + + G Q++
Sbjct: 200 DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVH 259
Query: 500 RIMQNEYGII 509
++ ++
Sbjct: 260 ALVLRSTSVL 269
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++F +N ++ Y G L +A+ LF + +W+ ++ +A G +AL LFR M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 469 SSGVRPNHVTLVGVLT--ACS----HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
GV P+ VT+ VL C+ H ++ GL + + N T C LL
Sbjct: 133 GEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCN------TLLDAYCKHGLL 186
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A A RV F+ D D V + +++ C G
Sbjct: 187 AAARRV-----FLEM--HDKDAVTYNAMMMGCSKEG 215
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 176/533 (33%), Positives = 277/533 (51%), Gaps = 75/533 (14%)
Query: 100 RKVHD----HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
RK+H H ++C P V I K D +FDEMP+ +V+S T +I
Sbjct: 17 RKIHSLASGHAHKAECSPVPV---DIKVCRSKSNIRMDVDELFDEMPELDVLSVTTLIGR 73
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
++ + A+ L+ +ML + P++FTF ++I + +GL + LG+QLHA +K +
Sbjct: 74 FARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTI 133
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMES 272
+ +A++ Y K +A N F I + ++ S+ ++I G+ K+D A +F EM
Sbjct: 134 VFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPE 193
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
N+ SWN ++ G FS+MG E
Sbjct: 194 RNVVSWNAMVGG-------------FSQMGHNE--------------------------- 213
Query: 333 HSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
E LF ML P+ TF + + A MASL
Sbjct: 214 -------------------------EAVSLFIEMLREGFMPNQSTFPCAITSAANMASLG 248
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
MG H +K+ DVFV N L+ Y KCGS+ + +FN + D + VSW+++I G+A
Sbjct: 249 MGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFA 308
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
Q G GE+A+ F RMR++G+RPN VTL+G+L AC+H GLVE+G + M+ E I
Sbjct: 309 QNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPGILKP 368
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E +C+VDLL+R GR+ EA F++ + FD WK+LL C H N ++ AA+ IL
Sbjct: 369 EHYACMVDLLSRFGRLKEAAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILA 428
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+DP + ++ V+L N Y+++G+W++V+ + MKE+G++++PG SWIE+++KIH
Sbjct: 429 LDPEDVSSYVMLSNAYSAAGRWQQVSTIRREMKEKGLKRIPGCSWIEVRSKIH 481
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 148/339 (43%), Gaps = 81/339 (23%)
Query: 42 FDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSL 93
FD++ + D+ S +Q+ Y EA+ F + I+P+ T+A +I + + L
Sbjct: 56 FDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRM---LLLNIKPNEFTFATVIHSSTGL 112
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT--- 150
+++ LG+++H + + + +L+ Y K S E+AR F+++ + NVVS+T
Sbjct: 113 KNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLI 172
Query: 151 ----------------------------AMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
AM+ G SQ G A+ L+++ML+ G MP+Q
Sbjct: 173 HGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQS 232
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TF I + + + +G+G+ HA +KS S + N+L++ Y K + D+ VF+ +
Sbjct: 233 TFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNEL 292
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
++ SW N +I G A +A+ F M
Sbjct: 293 PDRNTVSW----------------------------NAVICGFAQNGRGEDAVIFFERMR 324
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
L P+ +T+ LLCAC H+ +++KG+
Sbjct: 325 AAGLRPNSVTLLGLLCACN-----------HAGLVEKGY 352
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 14/205 (6%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
+NE V+ F ST+ I++ +++ SL +G+ H + S C D + N
Sbjct: 211 HNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCN 270
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+++ Y KCGS+ED+ +VF+E+P RN VSW A+I G +QNG+ A+ + +M +GL P
Sbjct: 271 SLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRP 330
Query: 180 DQFTFGSIIRACSGLCCVGLG-------RQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
+ T ++ AC+ V G RQ ++K EH + ++ + ++F R+
Sbjct: 331 NSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYA------CMVDLLSRFGRL 384
Query: 233 LDAWNVFSSIARKDITS-WGSMIDG 256
+A + T W +++ G
Sbjct: 385 KEAAKFLHDLPFDPGTGFWKALLGG 409
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 288/575 (50%), Gaps = 71/575 (12%)
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
R +G ++ L S + + +L++Y KCG + DAR VFD MP+RN VSW A+I
Sbjct: 107 RRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALI 166
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AG +++G +A+EL+++M + GL PD+ TF S++ A G C L QLH ++K
Sbjct: 167 AGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSA 225
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMIDGFSKLDFARTVFNEMES 272
L NA I Y++ + D+ +F I +D+ SW +M+ ++ N M+
Sbjct: 226 LGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTH--------NGMD- 276
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTS-PLSLYQGM 330
+EAM F M + PD + S++ +C+ +QG
Sbjct: 277 -------------------DEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGR 317
Query: 331 QIHSYIIKKGFYSNVPVCNAIL-------------------------------------- 352
IH +IK PVCNA++
Sbjct: 318 VIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYS 377
Query: 353 QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
QH + + + F M + + D F+ + + + +A L++G Q+H ++ +G A + F
Sbjct: 378 QHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDF 437
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L+ MY K G + AR+ F + V W+++I GYAQ G E LF M
Sbjct: 438 VSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRK 497
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+H+T VG++T+CSH GLV+EG ++ M+ +YG+ E +C VDL RAG++ +A
Sbjct: 498 APLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKA 557
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
+ I+ M F+ D +VW +LL +C+ HGNV++ A ++ +P + VLL ++Y+
Sbjct: 558 KKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGL 617
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
G W + A + MK+RG+ KVPG SWIE++ ++H+
Sbjct: 618 GMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHS 652
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 233/536 (43%), Gaps = 80/536 (14%)
Query: 119 NHILNMYGKCG--SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
N +L Y + L AR VFDE+P+R+ VSW A++A + +G A L M G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
L + F GS +R+ + +G QL + +KS +++ + +AL+ +Y K R+ DA
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF + ++ SW ++I G++ ES ++AS A+
Sbjct: 149 QVFDGMPERNTVSWNALIAGYT------------ESGDMAS----------------ALE 180
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--H 354
LF EM L PD T SLL A P S + Q+H I+K G + V NA +
Sbjct: 181 LFLEMEREGLAPDEATFASLLTAVEGP-SCFLMHQLHGKIVKYGSALGLTVLNAAITAYS 239
Query: 355 QAGEL---FRLFS---------------------------------LMLASQTKPDHITF 378
Q G L R+F +M S PD +F
Sbjct: 240 QCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSF 299
Query: 379 NDVMGACAAMASLE-MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS---LGSARELFN 434
++ +C+ + G +H ++K+ L V N L+ MY + + A + FN
Sbjct: 300 TSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFN 359
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ D VSW+S++ GY+Q G +ALK FR M S VR + L + S + +++
Sbjct: 360 SLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQL 419
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G Q++ ++ + G S ++ + +++G + +A + A V W +++
Sbjct: 420 GKQIHGLVIHS-GFASNDFVSSSLIFMYSKSGIIDDARKSFEE-ADKSSSVPWNAMIFGY 477
Query: 555 KTHG---NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
HG NVD+ E + + P + V L + +G +E + ++ +M+ +
Sbjct: 478 AQHGQAENVDI--LFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETK 531
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 35/326 (10%)
Query: 23 ELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPST 82
E CM+ D A + +S + + W+ + + + L +AL F + + N R
Sbjct: 347 ENCMMED-AYKCFNSLVLKDTVSWN-SMLTGYSQHGLSADALKFFRCMCSE-NVRTDEYA 403
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ + + S L LQLG+++H ++ S + + + ++ MY K G ++DAR F+E
Sbjct: 404 FSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEAD 463
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+ + V W AMI G +Q+GQ L+ +MLQ D TF +I +CS
Sbjct: 464 KSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCS---------- 513
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS-KLD 261
HA ++ + GS +++ M TK+ L R + + G + G + +LD
Sbjct: 514 -HAGLV--DEGSEILN-----TMETKYGVPL----------RMEHYACGVDLYGRAGQLD 555
Query: 262 FARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A+ + + M P+ W T++ N A + S + E P + LL +
Sbjct: 556 KAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAE--PRQHSTYVLLSSM 613
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVP 346
S L ++ ++KK S VP
Sbjct: 614 YSGLGMWSDRATVQRVMKKRGLSKVP 639
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 295/565 (52%), Gaps = 59/565 (10%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
NH+L +Y K ++ A+ +FDE+PQRN +WT +I+G ++ G L+ +M G
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P+Q+T S+++ CS + LG+ +HA ++++ ++ N+++ +Y K A +
Sbjct: 388 PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERL 447
Query: 239 FSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + D+ SW MI + + ++ + +F + ++ SWNTI+ G+ C A+
Sbjct: 448 FELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHAL 507
Query: 296 SLFSEMGD--RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS---------- 343
M + E ++ +L + S + L G Q+H ++K GF S
Sbjct: 508 EQLYCMVECGTEFSAVTFSIALILASSLSHVEL--GRQLHGMVLKFGFDSDGFIRSSLVE 565
Query: 344 ----------------NVPV-----CNAILQHQ---AG------------------ELFR 361
+VP+ NA + ++ AG + +
Sbjct: 566 MYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLK 625
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F LM+ D T ++ ACA LE G +H Y+ K G +D +V + L+DMY
Sbjct: 626 TFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYS 685
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
K GSL A +F +P++V W+S+I GYA G G A+ LF M + G+ PN VT +G
Sbjct: 686 KSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLG 745
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL ACSH GL+EEG + +R+M++ Y I P E + +VDL RAG + + ++FI +
Sbjct: 746 VLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGIS 805
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
VWKS L+SC+ H NV++GK +E +L++ P++ A VLL N+ AS+ +W+E AR+
Sbjct: 806 HLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVR 865
Query: 602 GSMKERGVRKVPGQSWIEIQTKIHA 626
M +RGV+K PGQSWI+++ +IH
Sbjct: 866 SLMHQRGVKKQPGQSWIQLKDQIHT 890
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 146/336 (43%), Gaps = 55/336 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ + SSL ++LGR++H +L D + + ++ MY KCG ++ A ++ ++
Sbjct: 524 TFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDV 583
Query: 142 P----------------QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
P + +VSW +M++G NG+ ++ + M++ ++ D T
Sbjct: 584 PLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVT 643
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
+II AC+ + GR +HA+V K H ++LI MY+K + DAW VF
Sbjct: 644 TIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEP 703
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
+I W SMI G+ A A+ LF EM ++
Sbjct: 704 NIVMWTSMISGY----------------------------ALHGQGMHAIGLFEEMLNQG 735
Query: 306 LIPDGLTVRSLLCACTSPLSLYQG-----MQIHSYIIKKGFYSNVPVCNAI--LQHQAGE 358
+IP+ +T +L AC+ + +G M +Y I G V C ++ L +AG
Sbjct: 736 IIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPG----VEHCTSMVDLYGRAGH 791
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
L + + + + + + +C ++EMG
Sbjct: 792 LTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMG 827
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 170/420 (40%), Gaps = 82/420 (19%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC------------- 128
T + ++ CS +LQLG+ VH +L + D VL N IL++Y KC
Sbjct: 392 TLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELM 451
Query: 129 ------------------GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
G +E + +F +P ++VVSW ++ G Q G E A+E
Sbjct: 452 NEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLY 511
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M++ G TF + S L V LGRQLH V+K S +++L+ MY K
Sbjct: 512 CMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCG 571
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
R+ A SI +D+ +D K + AR + E ++ + SW ++++G
Sbjct: 572 RMDKA-----SIILRDVP-----LDVLRKGN-ARVSYKEPKA-GIVSWGSMVSGYVWNGK 619
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--------- 341
+ + F M ++ D TV +++ AC + L G +H+Y+ K G
Sbjct: 620 YEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSS 679
Query: 342 -------------------YSNVP--------VCNAILQHQAGELFRLFSLMLASQTKPD 374
SN P + L Q LF ML P+
Sbjct: 680 LIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPN 739
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN--GLMDMYVKCGSLGSAREL 432
+TF V+ AC+ +E G + + +MK ++ V + ++D+Y + G L +
Sbjct: 740 EVTFLGVLNACSHAGLIEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNF 798
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 73/344 (21%)
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
LHA +K+ L N L+ +Y K + + A +F I +++ +W +I GF++
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
+ VFN LF EM + P+ T+ S+L C+
Sbjct: 371 SEMVFN----------------------------LFREMQAKGACPNQYTLSSVLKCCSL 402
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-HQAGELF----RLFSLMLASQTKPDHIT 377
+L G +H+++++ G +V + N+IL + ++F RLF LM + D ++
Sbjct: 403 DNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELM----NEGDVVS 458
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+N ++GA Y++ G + + ++F +
Sbjct: 459 WNIMIGA-----------------------------------YLRAGDVEKSLDMFRRLP 483
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DVVSW++++ G Q G AL+ M G + VT L S + VE G Q
Sbjct: 484 YKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQ 543
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
L+ M ++G RS +V++ + GR+ +A + + D
Sbjct: 544 LHG-MVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLD 586
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+GT LH +K G + N L+ +Y K ++ A++LF+ + + +W+ LI G+A
Sbjct: 308 LGT-LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFA 366
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-----IMQNEYG 507
+ G E LFR M++ G PN TL VL CS ++ LQL + +++N G
Sbjct: 367 RAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCS----LDNNLQLGKGVHAWMLRN--G 420
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
I + ++DL + +V E + + ++ + D+V W ++ + G+V+
Sbjct: 421 IDVDVVLGNSILDLYLKC-KVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVE 473
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 279/508 (54%), Gaps = 50/508 (9%)
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y + +E+AR +FD MP +NV+SW MI G ++ G + A++L+ MP++
Sbjct: 139 YVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLF------EXMPER--- 189
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+++S N +I + + R+ +A +F+ +
Sbjct: 190 ------------------------------NVVSWNTVITAFMQRRRVDEAQELFNRMPE 219
Query: 245 KDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+D+ SW +M+ G SK +D AR +F++M N+ SWNT+I G A +EA LF +M
Sbjct: 220 RDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQM 279
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELF 360
+REL + +++ L + + + K + V + +Q ++ E
Sbjct: 280 PERELS----SWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEAL 335
Query: 361 RLFSLM-LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
++FS M A+ KP+ TF V+GAC+ +A+L G Q+H I KT V++ L++M
Sbjct: 336 KIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINM 395
Query: 420 YVKCGSLGSARELFN--FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
Y KCG L AR++F+ + DVVSW+ +I YA G G +A+ LF M++ G RP++V
Sbjct: 396 YSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNV 455
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T + +L+ACSH GLV+EGL+L+ + + I + +C+VDL RAGR+ EA DFI
Sbjct: 456 TYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKG 515
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
+ VW +LLA C HG++D+GK AE +L+ +P N+ ++L NIYAS+GKW E
Sbjct: 516 LEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREA 575
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A + MK++G++K PG SWIE+ +H
Sbjct: 576 AGVRMKMKDKGLKKQPGCSWIEVGNTVH 603
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 16/258 (6%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EAL F +Q N + T+ ++ ACS L +L G+++H I + Q A + + +
Sbjct: 333 EALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSAL 392
Query: 122 LNMYGKCGSLEDARMVFDE--MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+NMY KCG LE AR +FD+ + R+VVSW MIA + +G + AI L+ +M G P
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE----HGSHLISQNALIAMYTKFDRILDA 235
D T+ +++ ACS V G +L ++++ H L+ ++ + R+ +A
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHF---TCLVDLFGRAGRLQEA 509
Query: 236 WNVFSSIARKDITS-WGSMIDG---FSKLDFARTVFN---EMESPNLASWNTIIAGVASC 288
++ + K S W +++ G +D + E E N ++ + AS
Sbjct: 510 FDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYAST 569
Query: 289 SNANEAMSLFSEMGDREL 306
EA + +M D+ L
Sbjct: 570 GKWREAAGVRMKMKDKGL 587
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 165/392 (42%), Gaps = 75/392 (19%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQNNTN------FRIRPSTYADLISACSSLRSLQLGRK 101
DLF + ++N+ + V F+Q F P D+IS + + L +
Sbjct: 180 LDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPER--DVISWTTMVAGLSKNGR 237
Query: 102 VHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMPQR--------------- 144
+ D L P + V N ++ Y + L++A +F++MP+R
Sbjct: 238 IDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQN 297
Query: 145 ----------------NVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSI 187
NVV+WTA+I+G Q+G+ A++++ +M + + P++ TF S+
Sbjct: 298 GKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSV 357
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF--SSIARK 245
+ ACS L + G+Q+H + K+ + +ALI MY+K + A +F SI +
Sbjct: 358 LGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHR 417
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
D+ S WN +IA A + ++A+SLF EM
Sbjct: 418 DVVS----------------------------WNGMIAAYAHHGHGHKAISLFDEMQALG 449
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK---GFYSNVPVCNAILQHQAGELFRL 362
PD +T +LL AC+ + +G+++ +++ + C L +AG L
Sbjct: 450 FRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEA 509
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
F + + KP + ++ C +++G
Sbjct: 510 FDFIKGLEVKPSASVWAALLAGCNVHGHIDLG 541
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L+ K G +G AR++F M D DVVSW+++I GY + G EEA LF R +
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR---NDAI 126
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQ------------------------NEYGII 509
N VT +++ +EE +L+ M + + +
Sbjct: 127 KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXM 186
Query: 510 PTRERRS--CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
P R S V+ + RV EA++ N+M + D++ W +++A +G +D +
Sbjct: 187 PERNVVSWNTVITAFMQRRRVDEAQELFNRMP-ERDVISWTTMVAGLSKNGRIDDARLLF 245
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+ K+ N + + YA + + +E +L M ER
Sbjct: 246 D---KMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPER 282
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+V L+ YV+ + AR LF+ M +V+SW+++I GYA+ G ++AL LF M
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMP 187
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS--CVVDLLARAG 526
V V+ V+TA V+E +L+ M P R+ S +V L++ G
Sbjct: 188 ERNV----VSWNTVITAFMQRRRVDEAQELFNRM-------PERDVISWTTMVAGLSKNG 236
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLL 551
R+ +A ++M ++V W +++
Sbjct: 237 RIDDARLLFDKMPV-RNVVSWNTMI 260
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 180/652 (27%), Positives = 327/652 (50%), Gaps = 74/652 (11%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTN 75
C + +E C+ +D+A +V D + D +W+ + ++L + + +AL +Q+ +
Sbjct: 170 CALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANL-RSERWEDALELSRRMQS-AS 227
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ T L+ AC LR+L G+++H +++ + + N I++MY + LE AR
Sbjct: 228 AKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELAR 287
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII------- 188
VFD N+ SW ++I+ + NG N A +L+ +M S + PD T+ S++
Sbjct: 288 AVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQG 347
Query: 189 ----------------------------RACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
+A L LG+++H ++++S+ +
Sbjct: 348 SYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCT 407
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEME----SP 273
+L+ MY K D + A VF K+I +W S+I G++ D A + +M+
Sbjct: 408 SLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKA 467
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+L +WN++++G + + EA+++ + + L P+ ++ +++ C + +Q
Sbjct: 468 DLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQ-- 525
Query: 334 SYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
FS M KP+ T + ++ ACA + L+
Sbjct: 526 ----------------------------FFSQMQEENVKPNSTTISTLLRACAGPSLLKK 557
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++HC+ MK G D+++ L+DMY K G L A E+F +++ + W+ +++GYA
Sbjct: 558 GEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAI 617
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
+G GEE LF M +G+RP+ +T +L+ C + GLV +G + + M+ +Y I PT E
Sbjct: 618 YGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIE 677
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
SC+VDLL +AG + EA DFI+ M D +W ++LA+C+ H ++ + + AA N+ ++
Sbjct: 678 HYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRL 737
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+P NSA VL+ NIY++ +W +V RL SM GV+ SWI+++ IH
Sbjct: 738 EPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIH 789
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 239/540 (44%), Gaps = 54/540 (10%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ C +L L LG +VH +L Q D L ++N+Y KC ++ A VFDE P +
Sbjct: 137 VLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQE 196
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
W ++ ++ + A+EL +M + T +++AC L + G+Q+H
Sbjct: 197 DFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHG 256
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDF 262
+VI+ S+ N++++MY++ +R+ A VF S ++ SW S+I ++ L+
Sbjct: 257 YVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNG 316
Query: 263 ARTVFNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
A +F EMES P++ +WN++++G + ++ + PD ++ S L
Sbjct: 317 AWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQ 376
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
A G +IH YI++ +V VC +++ D
Sbjct: 377 AVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLV---------------------DMYIK 415
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
ND C A + + ++ N L+ Y G +A +L M++
Sbjct: 416 ND----CLEKAEV---------VFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKE 462
Query: 439 ----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
D+V+W+SL+ GY+ GC EEAL + R++S G+ PN V+ +++ C +
Sbjct: 463 EGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTD 522
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED---FINQMAFDDDIVVWKSLL 551
LQ + MQ E + P S ++ A + + E+ F + F DDI + +L+
Sbjct: 523 ALQFFSQMQEE-NVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALI 581
Query: 552 ASCKTHGNVDVGKRAAENIL-KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
G + V NI K P + ++ YA G EEV L +M + G+R
Sbjct: 582 DMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMG----YAIYGHGEEVFTLFDNMCKTGIR 637
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 194/468 (41%), Gaps = 73/468 (15%)
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN-ALIAMYTKFDRILDAWNVFSSI 242
F G+ + R+LHA +IK +L++ + +++ Y +F A VF
Sbjct: 31 FSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFF-- 88
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS-NANEAMSLFSEM 301
+ FAR N WN+ + AS +++E + +F E+
Sbjct: 89 -----------------VGFAR---------NYLLWNSFLEEFASFGGDSHEILEVFKEL 122
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------- 353
D+ + D + +L C + + L+ GM++H+ ++K+GF +V + A++
Sbjct: 123 HDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGI 182
Query: 354 HQAGELF----------------------------RLFSLMLASQTKPDHITFNDVMGAC 385
+A ++F L M ++ K T ++ AC
Sbjct: 183 DRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQAC 242
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+ +L G Q+H Y+++ G + + N ++ MY + L AR +F+ ED ++ SW+
Sbjct: 243 GKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWN 302
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
S+I YA GC A LFR M SS ++P+ +T +L+ G E L R +Q+
Sbjct: 303 SIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSA 362
Query: 506 YGIIPTRERRSCVVDLLARAGRVH---EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
G P + + + G + E +I + + D+ V SL+ + D
Sbjct: 363 -GFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLV---DMYIKNDC 418
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
++A N A L + Y G ++ +L+ MKE G++
Sbjct: 419 LEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIK 466
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 182/637 (28%), Positives = 328/637 (51%), Gaps = 71/637 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYAD 85
+D ++ D L++ IW+ + + K + + F ++ + +I P+ T+
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNV-MLNGYAKCGALDSVIKGFSVMRMD---QISPNAVTFDC 244
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++S C+S + LG ++H ++ S + + N +L+MY KCG +DA +F M + +
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V+W MI+G Q+G ++ + +M+ SG++PD TF S++ + S + +Q+H
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC 364
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++++ + +ALI Y K + A N+FS D+ + +MI G+
Sbjct: 365 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY-------- 416
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+ N + +++ +F + ++ P+ +T+ S+L L+
Sbjct: 417 LHNGLYI--------------------DSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------ELFR---------------- 361
L G ++H +IIKKGF + + A++ A E+F
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 362 ------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
+F M S D ++ + + ACA + S G +H +++K LA D
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-R 468
V+ + L+DMY KCG+L +A +F M++ ++VSW+S+I G +++L LF M
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
SG+RP+ +T + ++++C HVG V+EG++ +R M +YGI P +E +CVVDL RAGR+
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA + + M F D VW +LL +C+ H NV++ + A+ ++ +DP+NS VL+ N +
Sbjct: 697 TEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAH 756
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A++ +WE V ++ MKER V+K+PG SWIEI + H
Sbjct: 757 ANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTH 793
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 239/531 (45%), Gaps = 72/531 (13%)
Query: 70 LQNNTNF--RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
L+N++ F P + L+ ACS+ L+ G++VH ++ + D+ IL MY
Sbjct: 23 LRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAM 82
Query: 128 CGSLEDARMVFDEMPQR--NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
CGS D +F + R ++ W ++I+ +NG N A+ Y +ML G+ PD TF
Sbjct: 83 CGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFP 142
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
+++AC L L V + ++LI Y ++ +I +F + +K
Sbjct: 143 CLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
D W M++G++K C + + FS M +
Sbjct: 203 DCVIWNVMLNGYAK----------------------------CGALDSVIKGFSVMRMDQ 234
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAG 357
+ P+ +T +L C S L + G+Q+H ++ G + N++L A
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294
Query: 358 ELFRL----------------------------FSLMLASQTKPDHITFNDVMGACAAMA 389
+LFR+ F M++S PD ITF+ ++ + +
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+LE Q+HCYIM+ ++LD+F+ + L+D Y KC + A+ +F+ DVV ++++I
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
GY G ++L++FR + + PN +TLV +L + ++ G +L+ + +
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG--F 472
Query: 510 PTRERRSC-VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
R C V+D+ A+ GR++ A + +++ DIV W S++ C N
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 132/553 (23%), Positives = 253/553 (45%), Gaps = 72/553 (13%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVH 103
W+ + SS + L N+AL AF F F + P ST+ L+ AC +L++ + +
Sbjct: 106 WN-SIISSFVRNGLLNQAL-AFYF--KMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
D + S + + + ++ Y + G ++ +FD + Q++ V W M+ G ++ G +
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
+ I+ + M + P+ TF ++ C+ + LG QLH V+ S +N+L+
Sbjct: 222 SVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
+MY+K R DA +F ++R D +W MI G+ + +
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY-----------------------VQS 318
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G+ E+++ F EM ++PD +T SLL + + +L QIH YI++
Sbjct: 319 GL-----MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 344 NVPVCNAILQ--------HQAGELF----------------------------RLFSLML 367
++ + +A++ A +F +F ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ P+ IT ++ + +L++G +LH +I+K G + ++DMY KCG +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A E+F + D+VSW+S+I AQ A+ +FR+M SG+ + V++ L+AC+
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
++ G ++ M ++ + S ++D+ A+ G + A + M + +IV W
Sbjct: 554 NLPSESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSW 611
Query: 548 KSLLASCKTHGNV 560
S++A+C HG +
Sbjct: 612 NSIIAACGNHGKL 624
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+T P ++ ++ AC+ L G Q+H +++ ++ D + ++ MY CGS
Sbjct: 32 ETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC 89
Query: 430 RELFNFME--DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F ++ + W+S+I + + G +AL + +M GV P+ T ++ AC
Sbjct: 90 GKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV 149
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
++N GI D L+ D ++ + D + V
Sbjct: 150 A-------------LKNFKGI-----------DFLS---------DTVSSLGMDCNEFVA 176
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
SL+ + +G +DV + + +L+ D ++ N YA G + V + M+
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKD---CVIWNVMLNGYAKCGALDSVIKGFSVMR 231
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 327/605 (54%), Gaps = 38/605 (6%)
Query: 50 LFSSLCKQNL---------YNEALVAFDFLQNNTNFRIR-------PSTYADLISACSSL 93
+F + K+N+ Y +A V D + + FR+R P T++ ++S +S
Sbjct: 113 VFEGMLKRNVVTWTSLLTGYIQAGVLLDVM--SLFFRMRAEGVWPNPFTFSSVLSMVASQ 170
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
+ LG+ VH + C + N ++NMY KCG +E+AR+VF M R++VSW ++
Sbjct: 171 GMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLM 230
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AG NG++ A++L+ S M + T+ ++I C+ L +GL RQLH+ V+K
Sbjct: 231 AGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFH 290
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDGF---SKLDFARTVFNE 269
S+ AL+ Y K ++ A +VF ++ +++ SW +MIDG + A +F+
Sbjct: 291 SYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSR 350
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLCACTSPL-SL 326
M +A + + + + S A+ + +++ + E P TV + L S L S
Sbjct: 351 MREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTP---TVGTALMVSYSKLCST 407
Query: 327 YQGMQIHSYIIKKGF--YSNVPVCNAILQHQAGE---LFRLFSLMLASQTKPDHITFNDV 381
+ + I I +K +S + C A QAG+ F M KP+ T +
Sbjct: 408 EEALSIFKMIDQKDVVSWSAMLTCYA----QAGDCNGATNAFIKMTMHGLKPNEFTISSA 463
Query: 382 MGACAAMAS-LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
+ ACA+ A+ +++G Q H +K + V + L+ MY + GS+ +A+ +F D D
Sbjct: 464 IDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRD 523
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
++SW+S++ GYAQ G ++AL +FR+M G+ + +T + V+ C+H GLVEEG Q +
Sbjct: 524 LLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFD 583
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+M +YGI PT + +C+VDL +RAG++ E I M F +W++LL +C+ H NV
Sbjct: 584 LMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNV 643
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
++GK AAE +L ++P +SA VLL NIY+++GKW+E + M + VRK G SWI+I
Sbjct: 644 ELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQI 703
Query: 621 QTKIH 625
+ K+H
Sbjct: 704 KNKVH 708
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 173/422 (40%), Gaps = 80/422 (18%)
Query: 187 IIRACSGLCCVGLGRQLHAHVIK--SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
II+ C + LG+QLHA ++ +HG + +L+ MY + +LD VF + +
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVG-TSLVDMYMNWHSVLDGRKVFEGMLK 119
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+++ +W S++ G+ I AGV + MSLF M
Sbjct: 120 RNVVTWTSLLTGY-----------------------IQAGVLL-----DVMSLFFRMRAE 151
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------- 357
+ P+ T S+L S + G +H+ IK G S V VCN+++ A
Sbjct: 152 GVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEA 211
Query: 358 -----------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAM 388
E +LF +S T T++ V+ CA +
Sbjct: 212 RVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANL 271
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSL 447
L + QLH ++K G VM LMD Y K G L A ++F M +VVSW+++
Sbjct: 272 KHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAM 331
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY 506
I G Q G A LF RMR GV PN +T +LT V Q++ ++++ Y
Sbjct: 332 IDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNY 387
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFIN--QMAFDDDIVVWKSLLASCKTHGNVDVGK 564
PT L+ ++ E+ ++ +M D+V W ++L G+ +
Sbjct: 388 ECTPT-----VGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGAT 442
Query: 565 RA 566
A
Sbjct: 443 NA 444
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 302/607 (49%), Gaps = 81/607 (13%)
Query: 65 VAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
+A + Q +RP+ T +S C+ +R R +H + S + V+ +
Sbjct: 211 MALELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVSTALA 267
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+ Y + G L+ A+ VFD +R+VVSW AM+ +Q+G + A L+ +ML G+ P +
Sbjct: 268 SAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKV 327
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T ++ A +G + GR +HA ++ ++ NAL+ MYT+ +A ++F I
Sbjct: 328 T---LVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI 384
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
N SWNT+IAG + A+ LF M
Sbjct: 385 -----------------------------PGNAVSWNTMIAGSSQKGQMKRALELFQRMQ 415
Query: 303 DRELIPDGLTVRSLLCACTS----PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------ 352
+ P T +LL A S ++ +G ++HS I+ G+ S + A++
Sbjct: 416 LEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASC 475
Query: 353 --------------------------------QHQAGE-LFRLFSLMLASQTKPDHITFN 379
QH G+ F M P+ IT
Sbjct: 476 GAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCV 535
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-D 438
V+ ACA A+L G +H ++ +G+ +VFV L MY +CGSL SARE+F + +
Sbjct: 536 AVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
DVV ++++I Y+Q G EALKLF RM+ G RP+ + V VL+ACSH GL +EG ++
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+R M+ YGI P+ + +C VD+L RAG + +AE+ I M ++VWK+LL +C+ +
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+VD G+ A + ++DP + +A V+L NI A +GKW+E A + M+ RG+RK G+SWI
Sbjct: 716 DVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWI 775
Query: 619 EIQTKIH 625
EI++++H
Sbjct: 776 EIKSRVH 782
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 154/544 (28%), Positives = 261/544 (47%), Gaps = 26/544 (4%)
Query: 55 CKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
C Q L A L ++++ RP+ L+ A R L GR++H I+S + +
Sbjct: 4 CCQGLSAAAPAPAADLPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE 63
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
L NH+L +Y KC SL D VF + R+ SWT +I +++GQ AI ++ +M Q
Sbjct: 64 --LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQ 121
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
G+ D TF ++++AC+ L + GR +HA +++S + N L+ +Y +
Sbjct: 122 EGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVAS 181
Query: 235 AWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWN-TIIAGVASCSN 290
A +F + R D+ SW + I ++ LD A +F M+ + T++ ++ C+
Sbjct: 182 AMLLFERMER-DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK 240
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS-LYQGMQIHSYIIKKGFYSNVPVCN 349
+A ++ S + + L L V + L + + L L Q ++ ++ S +
Sbjct: 241 IRQARAIHSIVRESGL-EQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLG 299
Query: 350 AILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
A QH E LF+ ML P +T + C +SL G +H ++ GL
Sbjct: 300 AYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC---SSLRFGRMIHACALEKGLDR 356
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ + N L+DMY +CGS AR LF + + VSW+++I G +Q G + AL+LF+RM+
Sbjct: 357 DIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQ 415
Query: 469 SSGVRPNHVTLVGVLTACS----HVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLA 523
G+ P T + +L A + + EG +L+ RI+ Y P + VV + A
Sbjct: 416 LEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYA 473
Query: 524 RAGRVHEAEDFINQMAFDD--DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
G + EA + A +D D+V W ++++S HG+ GKRA ++D A
Sbjct: 474 SCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH---GKRALGFFRRMDLHGVAPN 530
Query: 582 VLLC 585
+ C
Sbjct: 531 QITC 534
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 298/577 (51%), Gaps = 97/577 (16%)
Query: 84 ADLISACSSLRSLQLGRKVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDA-------- 134
A L+ C +SL+ G+ +H H+ ++ +P+ +L NH++ MY KCG DA
Sbjct: 50 ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 135 -----------------------RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
R+VFD MP+R+VVSW M+ G +Q+G + A+ + +
Sbjct: 110 LRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKE 169
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
+ +SG+ ++F+F ++ AC + L +Q H V+ + S+++ ++I Y K
Sbjct: 170 LRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKC-- 227
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+++ A+ F+EM ++ W T+I+G A +
Sbjct: 228 --------------------------GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
A LF EM ++ + + T+ ++ Y +++G
Sbjct: 262 EAADKLFREMPEKNPV-----------SWTALIAGY---------VRQG----------- 290
Query: 352 LQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
+G+L LF M+A + KP+ TF+ + A A++ASL G Q+H Y+++T + +
Sbjct: 291 ----SGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNA 346
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V + L+DMY K GSL ++ +F D D V W+++I AQ G G +AL++ M
Sbjct: 347 IVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIK 406
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
V PN TLV +L ACSH GLVEEG++ + M ++GI+P +E +C++DLL RAG
Sbjct: 407 FRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
E I +M F+ D +W ++L C+ HGN ++GK+AAE ++K+DP +SA +LL +IYA
Sbjct: 467 ELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYA 526
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
GKWE V +L G MK+R V K SWIEI+ K+ A
Sbjct: 527 DHGKWELVEKLRGIMKKRRVNKEKAVSWIEIENKVKA 563
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 312/602 (51%), Gaps = 73/602 (12%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLRSLQLGRK----VHDHILSSKC-QPDAVLHNHILN 123
F++ + + P++Y +++A L+ G++ VH ++ S + N ++N
Sbjct: 373 FMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLIN 432
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY KCG++ DA +VF M ++ V+W +MI G QN Q A++ + +M ++ L P FT
Sbjct: 433 MYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFT 492
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
S + +C+ L + +G QLH +K + NAL+A+Y + + + FS +
Sbjct: 493 MISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLML 552
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
D SW S+I + P++ EA+ F M
Sbjct: 553 DYDHVSWNSLIGALAD-----------SEPSML----------------EAVESFLVMMR 585
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAILQ-----HQAG 357
P+ +T ++L A +S LSL++ G QIH+ ++K+ ++ + NA+L G
Sbjct: 586 AGWDPNRVTFITILAAVSS-LSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMG 644
Query: 358 ELFRLFS--------------------------------LMLASQTKPDHITFNDVMGAC 385
+FS M+ + D TF V+ AC
Sbjct: 645 YCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSAC 704
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A +A+LE G ++H ++ L D+ + + L+DMY KCG + A F M ++ SW+
Sbjct: 705 ATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWN 764
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
S+I GYA+ G G ++L LF +M+ G P+HVT VGVL+ACSH GLV EG + M
Sbjct: 765 SMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEI 824
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL-ASCKTHG-NVDVG 563
YG+ P E SC+VDLL R G +++ EDF+NQM ++++W+++L A C+ +G N +G
Sbjct: 825 YGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALG 884
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+RAAE +L+++PTN+ +LL N+YAS GKW++VA+ +M++ V+K G SW+ ++
Sbjct: 885 RRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDG 944
Query: 624 IH 625
+H
Sbjct: 945 VH 946
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 241/480 (50%), Gaps = 31/480 (6%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
++H + + D L N ++N+Y + G L R VFDEMP RN+VSW+ +I+G ++
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL--GRQLHAHVIKSEHGSHL 216
N N A EL+ +M+ G MP+ + FGS+IRAC GL G Q+H + K+++ + +
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211
Query: 217 ISQNALIAMYTKFDRILD-AWNVFSSIARKDITSWGSMI-------DGFSKLDFARTVFN 268
+ N LI+MY ++D A F SI +++ S SMI D S D T+
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQK 271
Query: 269 EME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
E+ PN ++ ++I+ A+CS AN + L ++ R L + A S
Sbjct: 272 EVMGDGLKPNEYTFGSLIS--ATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLMLAS-QTKPDHITF 378
+ + I +K Y NV N ++ Q + E LF M S + P+ ++
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SY 387
Query: 379 NDVMGACAAMASLE----MGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLGSARELF 433
++ A LE G+++H +++++G L + + NGL++MY KCG++ A +F
Sbjct: 388 MIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVF 447
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
M++ D V+W+S+I G Q EA+K F+ MR + + P++ T++ L++C+ +G +
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWIS 507
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
G QL+ + G+ + ++ L G V E + + M D D V W SL+ +
Sbjct: 508 VGEQLH-CEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLM-LDYDHVSWNSLIGA 565
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 158/616 (25%), Positives = 266/616 (43%), Gaps = 108/616 (17%)
Query: 13 RWCCEYWDAFELCMLLDQAGEVVDSFL------------------RRFDDIWDFDLFSSL 54
R+ C DA EL + L + G V D FL + FD++ +L S
Sbjct: 84 RYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWS 143
Query: 55 C------KQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL--RSLQLGRKVHDHI 106
C + + NEA F + ++ F + +I AC L+ G ++H +
Sbjct: 144 CLISGYTRNRMPNEACELFRKMVSD-GFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLM 202
Query: 107 LSSKCQPDAVLHNHILNMYGKC-GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
++ D N +++MYG G ++ AR FD + RN+VS +MI+ Q G +A
Sbjct: 203 SKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSA 262
Query: 166 IELYVQM----LQSGLMPDQFTFGSIIRACSGLCCVGLG--RQLHAHVIKSEHGSHLISQ 219
+++ M + GL P+++TFGS+I A L GL QL V KS L
Sbjct: 263 FDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVG 322
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
+AL++ + K I G++K +F +M N+ S N
Sbjct: 323 SALVSGFAKAGSI-----------------------GYAK-----NIFQKMSYRNVVSLN 354
Query: 280 TIIAGVASCSNANEAMSLFSEMGDR-ELIPDGLTVRSLLCACTSPLSL----YQGMQIHS 334
+I G+ EA+ LF EM D EL P+ + +L A L +G ++H+
Sbjct: 355 GLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI--ILTAFPEFHVLENGKRKGSEVHA 412
Query: 335 YIIKKGFY-SNVPVCNAILQ--------HQAGELFRL----------------------- 362
++I+ G + + + N ++ + A +FRL
Sbjct: 413 FLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFL 472
Query: 363 -----FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
F M ++ P + T + +CA++ + +G QLHC +K GL LDV V N L+
Sbjct: 473 EAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALL 532
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE-EALKLFRRMRSSGVRPNH 476
+Y +CG + ++ F+ M D D VSW+SLI A EA++ F M +G PN
Sbjct: 533 ALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNR 592
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
VT + +L A S + L E G Q++ ++ + + ++ + G + E+ +
Sbjct: 593 VTFITILAAVSSLSLHELGKQIHALVLKR-NVAADTAIENALLACYGKCGDMGYCENIFS 651
Query: 537 QMAFDDDIVVWKSLLA 552
+M+ D V W S+++
Sbjct: 652 RMSDRQDEVSWNSMIS 667
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 190/427 (44%), Gaps = 70/427 (16%)
Query: 64 LVAFDFLQNNTNFRIRPSTYADL--ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
L A Q + PS + + +S+C+SL + +G ++H L D + N +
Sbjct: 472 LEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNAL 531
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN-AAIELYVQMLQSGLMPD 180
L +YG+CG +++ + F M + VSW ++I + + A+E ++ M+++G P+
Sbjct: 532 LALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPN 591
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+ TF +I+ A S L LG+Q+HA V+K + +NAL+A Y K + N+FS
Sbjct: 592 RVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFS 651
Query: 241 SIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
++ R+D SW SMI G+ + NE+ +AM +
Sbjct: 652 RMSDRQDEVSWNSMISGY--------IHNEL--------------------LPKAMDMVW 683
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--G 357
M + DG T ++L AC + +L +GM++H ++ S++ + +A++ A G
Sbjct: 684 FMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCG 743
Query: 358 EL---FRLFSLM--------------------------LASQTK-----PDHITFNDVMG 383
+ R F +M L +Q K PDH+TF V+
Sbjct: 744 RIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLS 803
Query: 384 ACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDV 441
AC+ + G + GLA + + ++D+ + G L + N M P+V
Sbjct: 804 ACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNV 863
Query: 442 VSWSSLI 448
+ W +++
Sbjct: 864 LIWRTVL 870
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 31/264 (11%)
Query: 36 DSFLRRFDDIWDFDLFSSLCKQNLYNEALV-AFD--FLQNNTNFRIRPSTYADLISACSS 92
++ R D D ++S+ ++NE L A D + R+ T+A ++SAC++
Sbjct: 647 ENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACAT 706
Query: 93 LRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM 152
+ +L+ G +VH + + + D V+ + +++MY KCG ++ A F+ MP RN+ SW +M
Sbjct: 707 VATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSM 766
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
I+G +++G +++L+ QM G +PD TF ++ ACS HA ++ +E
Sbjct: 767 ISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACS-----------HAGLV-NEG 814
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEME- 271
SH S + + + + + FS + ++ +L+ N+M
Sbjct: 815 FSHFDSMSEIYGLAPRMEH-------FSCMV--------DLLGRVGELNKMEDFLNQMPV 859
Query: 272 SPNLASWNTIIAGVASCSNANEAM 295
PN+ W T++ + N A+
Sbjct: 860 KPNVLIWRTVLGACCRANGRNTAL 883
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 290/528 (54%), Gaps = 71/528 (13%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D V N I+ Y K G ++++ +F MP +NVVSW +MIAGC E+ I+ Q
Sbjct: 5 DTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCI----EDERIDEAWQYF 60
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
Q+ MP + T S NA+I+ ++DR+
Sbjct: 61 QA--MPQRNT---------------------------------ASWNAMISGLVRYDRVE 85
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSN 290
+A +F + R+++ S+ +M+DG++K+ + AR +FN M N+ SW +I+G
Sbjct: 86 EASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGK 145
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY--QGMQIHSYIIKKGFYSNVPVC 348
+EA +LF +M D+ ++ A T+ ++ Y +G + I+ + +P C
Sbjct: 146 FDEAENLFEQMPDKNIV-----------AMTAMITGYCKEGKTDKAKIL----FDQIP-C 189
Query: 349 ------NAIL----QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
NA++ Q+ +GE +L S ML +PDH T V+ AC+++ASL+ G +
Sbjct: 190 RDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKT 249
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H ++K+G + + N L+ MY KCGS+ + F ++ PDVVSW+++I +A+ G
Sbjct: 250 HVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFY 309
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
+ AL F MRS+ V P+ +T + +L+AC H G V E L + M Y I+P E +C
Sbjct: 310 DRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFAC 369
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+VD+L+R G+V +A I +M F+ D +W +LLA+C H NV +G+ AA+ I++++P N
Sbjct: 370 LVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQN 429
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
S A V+L NIYA++G W EV R+ G M+E+GV+K P SW+EI K+H
Sbjct: 430 SGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVH 477
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 174/415 (41%), Gaps = 97/415 (23%)
Query: 41 RFDDIWDFDLFSSLCKQNLYN-----EALVAFDFLQNNTN-FRIRPS----TYADLISAC 90
R D+ W + F ++ ++N + LV +D ++ + F P +Y ++
Sbjct: 52 RIDEAWQY--FQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGY 109
Query: 91 SSLRSLQLGRKVHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV- 147
+ + ++ R + + C P + V +++ Y + G ++A +F++MP +N+V
Sbjct: 110 AKIGEIEQARALFN------CMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVA 163
Query: 148 ------------------------------SWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
SW AMI G +QNG A++L+ QML+ G+
Sbjct: 164 MTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGM 223
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
PD T S++ ACS L + GR+ H V+KS + S + NALI MY K ILD+
Sbjct: 224 QPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSEL 283
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
F I D+ SW +MI F++ F + A++
Sbjct: 284 AFRQIDHPDVVSWNAMIAAFARHGF----------------------------YDRALAS 315
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAIL 352
F EM + PDG+T SLL AC +++ + + +I+ Y VP C +
Sbjct: 316 FGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIES--YKIVPRPEHFACLVDI 373
Query: 353 QHQAGELFRLFSLMLASQTKPD-----------HITFNDVMGACAAMASLEMGTQ 396
+ G++ + + ++ + D H+ N +G AA +E+ Q
Sbjct: 374 LSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQ 428
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 288/575 (50%), Gaps = 71/575 (12%)
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
R +G ++ L S + + +L++Y KCG + DAR VFD MP+RN VSW A+I
Sbjct: 107 RRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALI 166
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AG +++G +A+EL+++M + GL PD+ TF S++ A G C L QLH ++K
Sbjct: 167 AGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSA 225
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMIDGFSKLDFARTVFNEMES 272
L NA I Y++ + D+ +F I +D+ SW +M+ ++ N M+
Sbjct: 226 LGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTH--------NGMD- 276
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTS-PLSLYQGM 330
+EAM F M + PD + S++ +C+ +QG
Sbjct: 277 -------------------DEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGR 317
Query: 331 QIHSYIIKKGFYSNVPVCNAIL-------------------------------------- 352
IH +IK PVCNA++
Sbjct: 318 VIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYS 377
Query: 353 QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
QH + + + F M + + D F+ + + + +A L++G Q+H ++ +G A + F
Sbjct: 378 QHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDF 437
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L+ MY K G + AR+ F + V W+++I GYAQ G E LF M
Sbjct: 438 VSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRK 497
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+H+T VG++T+CSH GLV+EG ++ M+ +YG+ E +C VDL RAG++ +A
Sbjct: 498 APLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKA 557
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
+ I+ M F+ D +VW +LL +C+ HGNV++ A ++ +P + VLL ++Y+
Sbjct: 558 KKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGL 617
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
G W + A + MK+RG+ KVPG SWIE++ ++H+
Sbjct: 618 GMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHS 652
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 233/536 (43%), Gaps = 80/536 (14%)
Query: 119 NHILNMYGKCG--SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
N +L Y + L AR VFDE+P+R+ VSW A++A + +G A L M G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
L + F GS +R+ + +G QL + +KS +++ + +AL+ +Y K R+ DA
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF + ++ SW ++I G++ ES ++AS A+
Sbjct: 149 QVFDGMPERNTVSWNALIAGYT------------ESGDMAS----------------ALE 180
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--H 354
LF EM L PD T SLL A P S + Q+H I+K G + V NA +
Sbjct: 181 LFLEMEREGLAPDEATFASLLTAVEGP-SCFLMHQLHGKIVKYGSALGLTVLNAAITAYS 239
Query: 355 QAGEL---FRLFS---------------------------------LMLASQTKPDHITF 378
Q G L R+F +M S PD +F
Sbjct: 240 QCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSF 299
Query: 379 NDVMGACAAMASLE-MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS---LGSARELFN 434
++ +C+ + G +H ++K+ L V N L+ MY + + A + FN
Sbjct: 300 TSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFN 359
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ D VSW+S++ GY+Q G +ALK FR M S VR + L + S + +++
Sbjct: 360 SLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQL 419
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G Q++ ++ + G S ++ + +++G + +A + A V W +++
Sbjct: 420 GKQIHGLVIHS-GFASNDFVSSSLIFMYSKSGIIDDARKSFEE-ADKSSSVPWNAMIFGY 477
Query: 555 KTHG---NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
HG NVD+ E + + P + V L + +G +E + ++ +M+ +
Sbjct: 478 AQHGQAENVDI--LFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETK 531
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 35/326 (10%)
Query: 23 ELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPST 82
E CM+ D A + +S + + W+ + + + L +AL F + + N R
Sbjct: 347 ENCMMED-AYKCFNSLVLKDTVSWN-SMLTGYSQHGLSADALKFFRCMCSE-NVRTDEYA 403
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ + + S L LQLG+++H ++ S + + + ++ MY K G ++DAR F+E
Sbjct: 404 FSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEAD 463
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+ + V W AMI G +Q+GQ L+ +MLQ D TF +I +CS
Sbjct: 464 KSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCS---------- 513
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS-KLD 261
HA ++ + GS +++ M TK+ L R + + G + G + +LD
Sbjct: 514 -HAGLV--DEGSEILN-----TMETKYGVPL----------RMEHYACGVDLYGRAGQLD 555
Query: 262 FARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A+ + + M P+ W T++ N A + S + E P + LL +
Sbjct: 556 KAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAE--PRQHSTYVLLSSM 613
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVP 346
S L ++ ++KK S VP
Sbjct: 614 YSGLGMWSDRATVQRVMKKRGLSKVP 639
>gi|302782902|ref|XP_002973224.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
gi|300158977|gb|EFJ25598.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
Length = 546
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 296/546 (54%), Gaps = 28/546 (5%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
IRP+ T+ ++ ACS+L ++ GRK+H ++ D V+ IL MY KC L DA+
Sbjct: 6 IRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAK 65
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFD + +++VVSWTA+I SQ G+ A+EL+ +M G+ P++ TF +I+ AC+ +
Sbjct: 66 KVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMD 125
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G +L+ I +G+ + + + MY++F +++A F + K SW +++
Sbjct: 126 ALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVR 185
Query: 256 GF---SKLDFARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+ + A +++ EM+ P+ + ++ +S E + + MGD+ P
Sbjct: 186 AYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHARMGDK---P 242
Query: 309 DGLTVRSLLCACTSPLSLYQ---GMQIHSYIIKKGFYSNVPVCNAILQ-HQAGELFR--- 361
DGL A ++ +++Y G++ K SNV V NA++ + GE ++
Sbjct: 243 DGL-------AGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEAL 295
Query: 362 -LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
L+ M + D TF+ V+GAC+ L G +H I+ GL + V + NGL++M+
Sbjct: 296 DLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSGGLEVVVPLQNGLVNMF 355
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCGSL A E+F M + VSW+S++ + Q G G A +LF+ M G P+ T
Sbjct: 356 AKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGEGGGAFELFKEMLLEGAEPHEQTFT 415
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
+L CSH GL+++G + M +E+GI P E CV+DLL R G + AE + AF
Sbjct: 416 SILNFCSHSGLLQDGFGYFFDMVDEFGIAPVDEHYRCVIDLLGRTGHIAAAEKMVEH-AF 474
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARL 600
++ W SLLA+C+T+ NV++ RA E ++++ P N A LV L N+ A +G+W+ V R+
Sbjct: 475 PGSVIAWTSLLAACRTYRNVEIAARATEELMRVRPENPAPLVQLANLCAEAGRWDAVERV 534
Query: 601 MGSMKE 606
M+E
Sbjct: 535 KRMMEE 540
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 15/393 (3%)
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ P+ TF I+ ACS L V GR++HA ++ + + A++ MY+K +++ DA
Sbjct: 5 GIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDA 64
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFART---VFNEME----SPNLASWNTIIAGVASC 288
VF S+ RKD+ SW ++I FS+L R +F EM+ PN +++ I+A
Sbjct: 65 KKVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYM 124
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
+ L+ D + + + +L + ++ +K S +
Sbjct: 125 DALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIV 184
Query: 349 NAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
A +QH + L+ M +PD T ++GAC+++ +LE G ++H + G
Sbjct: 185 RAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDK 241
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D + ++ MY KCG + A F M +VV W++LI GY Q +EAL L+ M
Sbjct: 242 PDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAM 301
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAG 526
G+ + T VL ACS + EG ++ RI+ G+ ++ +V++ A+ G
Sbjct: 302 NLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSG--GLEVVVPLQNGLVNMFAKCG 359
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ A + MA + V W S++ + HG
Sbjct: 360 SLTLALEMFRGMA-SRNTVSWNSMVTAFCQHGE 391
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 180/563 (31%), Positives = 296/563 (52%), Gaps = 69/563 (12%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L+ G ++HD I S ++ N +++MY +CG L++A VF +MP RNVVSWT+MIA
Sbjct: 265 LRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAA 324
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL---CCVGLGRQLHAHVIKSEH 212
+Q+G + A++L+ M+ G+ P++ T+ S++ A + L + GR++H+ + S
Sbjct: 325 VAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGI 384
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
+ I QN+LI MY + + +A VF SI L+ ++TV
Sbjct: 385 DADPIVQNSLINMYARSGLLAEAREVFDSI-----------------LENSKTVV----- 422
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
S+ T+IA A + +A+ +F EM R + P+ +T ++L AC + L G I
Sbjct: 423 ----SFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWI 478
Query: 333 HSYIIKKGFYSNVPVC-NAILQHQA--GEL------------------------------ 359
H +I+ G S+ P N+++ A G+L
Sbjct: 479 HERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGN 538
Query: 360 ----FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
L+ ML S PD T + ++ ACA + L MG ++H +++ L D N
Sbjct: 539 NRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNA 598
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L MY KCGSL A L+ DV +W+S++ ++Q G AL+L+ M S GVRPN
Sbjct: 599 LAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPN 658
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
VT + VL +CS GLV EG + + + ++YG P+ E C+VD+L RAG++ +AE+ +
Sbjct: 659 EVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELL 718
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK-- 593
+ M F D + W+SLL+SCK H + ++G RAAE +L++DP +++ V L IYA++G+
Sbjct: 719 DSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALSQIYAAAGRNS 778
Query: 594 -WEEVARLMGSMKERGVRKVPGQ 615
+E+ R + ++ V + G+
Sbjct: 779 DIDEIKRELALRRQIEVHRTTGE 801
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 147/571 (25%), Positives = 251/571 (43%), Gaps = 81/571 (14%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
++AL+ D L++ + ++ YA+L+ C + R+L GR+VH HI+S + +A+L
Sbjct: 33 DDALLRLDKLRHRSTSQL--LLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGEL 90
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+ MY +C + A +FD MP R W ++ + +ELY +M P
Sbjct: 91 VFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPS 150
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
F I AC + + GR +H + + + G + Q+AL+ MY + RI
Sbjct: 151 ACGFMWAIVACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRI-------- 201
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
D A F++ A WN I++ +A + A+ LF +
Sbjct: 202 --------------------DLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQ 241
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------- 353
M + + L AC + L G+QIH I + + V V NA++
Sbjct: 242 MEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGK 299
Query: 354 --------------------------HQAGEL---FRLFSLMLASQTKPDHITFNDVMGA 384
Q+G +LF M+A P+ T+ V+ A
Sbjct: 300 LDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSA 359
Query: 385 CAAM---ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN-FMEDPD 440
A + A L+ G ++H I +G+ D V N L++MY + G L ARE+F+ +E+
Sbjct: 360 IAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSK 419
Query: 441 -VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
VVS++++I YA G +AL++FR M + GV PN +T VL AC +G + G ++
Sbjct: 420 TVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIH 479
Query: 500 RIMQNEYGIIPTRE-RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
M E G+ + + +VD+ A+ G + A M D+V W +++A+ G
Sbjct: 480 ERMI-ESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMK-TKDLVAWTTIIAANVQSG 537
Query: 559 N----VDVGKRAAENILKIDPTNSAALVLLC 585
N +D+ R ++ + D + L++ C
Sbjct: 538 NNRAALDLYDRMLQSGIHPDIATLSTLLVAC 568
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 65 VAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
A D I P +T + L+ AC++L L +G K+H L SK + DA N +
Sbjct: 541 AALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALA 600
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
MY KCGSLE A ++ +V +WT+M+A SQ G + A+ELY +M G+ P++
Sbjct: 601 AMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEV 660
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFS 240
TF ++ +CS V GR+ H I S++GS +++ ++ + + ++ DA +
Sbjct: 661 TFIPVLISCSQAGLVAEGREFF-HSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLD 719
Query: 241 SIA-RKDITSWGSMI 254
S+ D +W S++
Sbjct: 720 SMPFYPDEIAWQSLL 734
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 307/613 (50%), Gaps = 68/613 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ + + L EA+ F ++ T + T+ ++ AC+ L S LG++VH + +
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYT-LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN 455
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ N L+MY K G++ DA+ +F +P ++ +SW A+ G +QN +E A+ +
Sbjct: 456 CMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCML 515
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M G+ PD +F + I ACS + G+Q+H IK S+ ++LI +Y+K
Sbjct: 516 KRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK- 574
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
D+ S +R +F ++++ ++ N +IAG +
Sbjct: 575 --------------HGDVES-------------SRKIFAQVDASSIVPINALIAGFVQNN 607
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------- 341
N +EA+ LF ++ L P +T S+L C+ L+ G Q+H Y +K G
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 667
Query: 342 -------------------------YSNVPVCNAILQHQAGELFRLFSL-----MLASQT 371
+ N+ AI+ A + SL M
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 727
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+ D TF V+ AC+ + + G ++H I K+G + L+DMY KCG + S+ E
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 787
Query: 432 LFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
F +++ D++ W+S+IVG+A+ G +EAL LF++M ++P+ VT +GVL AC+H G
Sbjct: 788 AFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSG 847
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
L+ EG + M+ YG+ P + +C +DLL R G + EA++ I+Q+ F D VVW +
Sbjct: 848 LISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATY 907
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
LA+C+ H + + GK AA +++++P S+ VLL +++A++G W E SM+E+GV
Sbjct: 908 LAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVA 967
Query: 611 KVPGQSWIEIQTK 623
K PG SWI + K
Sbjct: 968 KFPGCSWITVGNK 980
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 151/569 (26%), Positives = 257/569 (45%), Gaps = 76/569 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST+A ++SA +++++ G+++H + + + + ++N+Y KCG DA+ VFD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
++N+V W AM+ G QN AI ++ M++ L D+FTF SI+ AC+ L LG
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 445
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H IK+ L NA + MY+K+ I DA +FS I KD
Sbjct: 446 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI------------ 493
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
SWN + G+A EA+ + M + PD ++ + + AC
Sbjct: 494 ----------------SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSN--------------------------------VPVC 348
++ + G QIH IK G SN VP+
Sbjct: 538 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPI- 596
Query: 349 NAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
NA++ + E +LF +L KP +TF+ ++ C+ + +G Q+HCY +K
Sbjct: 597 NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLK 656
Query: 404 TGLALDVFVMN-GLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVGYAQFGCGEEAL 461
+G+ D ++ L +Y+K L A +L M D ++ W+++I GYAQ G G+ +L
Sbjct: 657 SGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 716
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
F RMR VR + T VL ACS V +G +++ ++ G S ++D+
Sbjct: 717 VSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKS-GFGSYETATSALIDM 775
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG----KRAAENILKIDPTN 577
++ G V + + ++ DI+ W S++ +G D ++ E +K D
Sbjct: 776 YSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVT 835
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKE 606
+++ C SG E G M++
Sbjct: 836 FLGVLIACT---HSGLISEGRHFFGPMRK 861
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 138/554 (24%), Positives = 240/554 (43%), Gaps = 77/554 (13%)
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
R Q R +H IL L + ++ +Y K G + A +R + ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 154 AGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ +++G + + + +G PDQF ++ ACS + + GRQ+H V+KS
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 189
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF--------------- 257
S + + AL+ MY K + +A VF IA D W SMI +
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 249
Query: 258 -----------------------SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
+LD A + +M +P+ +WN +I+G A
Sbjct: 250 MDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV 309
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+ L+ +M L P T S+L A + + +G Q+H+ + G +NV V ++++
Sbjct: 310 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 369
Query: 355 QAG------------------------------------ELFRLFSLMLASQTKPDHITF 378
A E R+F M+ + D TF
Sbjct: 370 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 429
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++GAC ++S +G Q+HC +K + + +FV N +DMY K G++G A+ LF+ +
Sbjct: 430 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 489
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D +SW++L VG AQ EEA+ + +RMR G+ P+ V+ + ACS++ E G Q+
Sbjct: 490 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + +YGI S ++DL ++ G V + Q+ IV +L+A +
Sbjct: 550 H-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVD-ASSIVPINALIAGFVQNN 607
Query: 559 NVDVGKRAAENILK 572
N D + + +LK
Sbjct: 608 NEDEAIQLFQQVLK 621
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 224/522 (42%), Gaps = 94/522 (18%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + + L AF +++ R A ++SACS + L GR+VH ++ S
Sbjct: 128 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 187
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+++MY KCG + +AR VFD + + + W++MIA + G A+ L+
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 247
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH-VIKSEHGSHLISQNALIAMYTK 228
+M + G PDQ T +II + GR HA ++K ++ NA+I+ + +
Sbjct: 248 SRMDKMGSAPDQVTLVTIISTLA-----SSGRLDHATALLKKMPTPSTVAWNAVISGHAQ 302
Query: 229 FDRILDAWNVFSSIARKDITSWG------------------------------------- 251
+ ++ KD+ SWG
Sbjct: 303 SGLEFNVLGLY-----KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 252 -------SMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
S+I+ ++K A+ VF+ N+ WN ++ G EA+ +F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA----- 356
L D T S+L ACT S Y G Q+H IK ++ V NA L +
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477
Query: 357 GELFRLFSLMLASQT-------------------------------KPDHITFNDVMGAC 385
G+ LFSL+ + PD ++F+ + AC
Sbjct: 478 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+ + + E G Q+HC +K G+ + V + L+D+Y K G + S+R++F ++ +V +
Sbjct: 538 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
+LI G+ Q +EA++LF+++ G++P+ VT +L+ CS
Sbjct: 598 ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LH I++ G L + + L+++Y K G +G A + + + SSL+ +A+ G
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 457 GEEALKLFRRMR-SSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRER 514
+ L FR +R ++G RP+ L VL+ACS VG++ G Q++ ++++ G +
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS--GFSSSVFC 195
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+ +VD+ A+ G V A + +A D I W S++A + V + A ++D
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTI-CWSSMIA---CYHRVGCYQEALALFSRMD 251
Query: 575 PTNSA----ALVLLCNIYASSGKWEEVARLMGSM 604
SA LV + + ASSG+ + L+ M
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 299/554 (53%), Gaps = 46/554 (8%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+ + V +N +L+ Y +CG L DA F+EMP+RNVVSWT+++ G + G+ A EL+
Sbjct: 104 ERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNV 163
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + ++ +IR+ R + +KS+ +S N +IA Y + R
Sbjct: 164 MPERNVVSWNSMLVGLIRSGQ---LEEARRVFNEMPVKSQ-----VSWNVMIAGYAEHSR 215
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVA-- 286
+ +A +F + +++ +W SMI G+ + + +F +M N+ SW +I G A
Sbjct: 216 MEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWN 275
Query: 287 ---------------SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ 331
SC++ ++ + + D + VR + S S+ G
Sbjct: 276 GFYKEALNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKI----SWTSMINGYF 331
Query: 332 IHSYIIKKGF-YSNVPVCNAIL------QHQAGELF----RLFSLMLASQTKPDHITFND 380
I K + ++N+P +A+ H ELF LFS M P + TF+
Sbjct: 332 NVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSI 391
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++GA AMA L+ G Q HC +MKT D+ + N L+ MY KCG +G A +F+ M D
Sbjct: 392 LLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRD 451
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
++SW+S+I+G++ G EALK+F M +SG PN VT +G+L+ACSH GL+ +G +L+
Sbjct: 452 LISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFD 511
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG-N 559
M + + I P E C+V+LL RAG+V EAE+FI+++ F+ D+ +W +LL C N
Sbjct: 512 AMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMIN 571
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
V +RAA+ +L++DP N+ A V+LCNI+AS G+ E +L M +GVRKVPG SWI
Sbjct: 572 TGVARRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWIL 631
Query: 620 IQTK--IHASGNDI 631
++ + + SG+ I
Sbjct: 632 LKGEPYVFLSGDRI 645
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 74/123 (60%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST++ L+ A ++ L GR+ H ++ ++ + D +L N +++MY KCG + DA +F +
Sbjct: 387 STFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSK 446
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M R+++SW +MI G S +G + A++++ ML SG P+ TF I+ ACS + G
Sbjct: 447 MISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQG 506
Query: 201 RQL 203
+L
Sbjct: 507 WEL 509
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 19/172 (11%)
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
VV W+SL+ +++ G +EA LF M V VT +L+ G + + + +
Sbjct: 76 VVCWTSLLSKFSKNGFIDEARALFEIMPERNV----VTYNAMLSGYVQCGRLSDACRFFE 131
Query: 501 IMQNEYGIIPTRERRSCVVDL--LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
M P R S L LA AGR+ EA + N M + ++V W S+L G
Sbjct: 132 EM-------PERNVVSWTSLLCGLANAGRIGEARELFNVMP-ERNVVSWNSMLVGLIRSG 183
Query: 559 NVDVGKRAAENILKIDPTNS-AALVLLCNIYASSGKWEEVARLMGSMKERGV 609
++ +R + P S + ++ YA + EE L M +R V
Sbjct: 184 QLEEARRVFNEM----PVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNV 231
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 284/545 (52%), Gaps = 38/545 (6%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y +LI C R L GR +H ++ + Y CG ++DAR++FD++P
Sbjct: 31 YIELIETCGRNRDLNFGRSLHARLIIDGSARLTHFAAKFIAFYAACGKIKDARILFDKIP 90
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+ N W +I S+ G A+ ++ ++ + GL P ++ S+++AC L GR+
Sbjct: 91 RTNPRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRK 150
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
LH ++K+ S +ALI MY K + A VF S+A KD+ + +M+ G++
Sbjct: 151 LHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGL 210
Query: 263 ARTVFNEME-------SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
A N +E PNL +WNT++ G + LF EM + PD ++ S
Sbjct: 211 AEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTS 270
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDH 375
++ GF N + E F F ML + P
Sbjct: 271 VI---------------------SGFVQNF---------RNEEAFDTFRRMLNAGFHPTS 300
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
T + ++ ACA++ + G ++H + + G+ DV+V L+DMY KCG A+ LF
Sbjct: 301 ATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWR 360
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP-NHVTLVGVLTACSHVGLVEE 494
M + + +W+S+I GYA G EA++LF +M+ + +H+T +LTAC+H GLV+
Sbjct: 361 MSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDL 420
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G L+++MQ++YGI+P E +C+VD+ RAG++ EA D I M D+ VW +LL +C
Sbjct: 421 GRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGAC 480
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ HG +++ + AA+++ +++P + +LL +IYA++G W V +L MK+R ++K PG
Sbjct: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDIYANAGSWGHVVKLKKMMKKRKMKKFPG 540
Query: 615 QSWIE 619
SWIE
Sbjct: 541 CSWIE 545
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 113/209 (54%), Gaps = 9/209 (4%)
Query: 57 QNLYNEALVAFDFLQN--NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
QN NE AFD + N F +T + L+ AC+S+ + + G+++H H L+ + D
Sbjct: 277 QNFRNEE--AFDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKD 334
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ +++MY KCG +A+++F M +RN +W +MI G + +G N AIEL+ QM
Sbjct: 335 VYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKD 394
Query: 175 SGLMP-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDR 231
D TF +I+ AC+ V LGR L +++S++G + ++ ++ + +
Sbjct: 395 DDEKKLDHLTFTAILTACAHAGLVDLGRSLF-QLMQSKYGIVPRVEHYACMVDVFGRAGK 453
Query: 232 ILDAWNVFSSIARK-DITSWGSMIDGFSK 259
+ +A+++ ++ K D+ WG+++ K
Sbjct: 454 LAEAYDLIKTMPVKPDLYVWGALLGACRK 482
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 282/535 (52%), Gaps = 51/535 (9%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G + DAR +FD MP R+VVSWTAM+A ++ G A L+ + PD +++
Sbjct: 55 GRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR-------PDARR--NVV 105
Query: 189 RACSGLCCVGLGRQLHAH--VIKSEHGSHLISQNALIAMYTKFDRILDA----------- 235
+ L R++ + + +++S N ++ YT R+ DA
Sbjct: 106 TWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRD 165
Query: 236 ---WNV-----------------FSSIARKDITSWGSMIDGFSK---LDFARTVFNEMES 272
WN+ F + +D+ SW +MI G ++ +D A +F+ M
Sbjct: 166 AGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPE 225
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
N+ SWN +I+G A EA+ LF++M R++ + + + L Q+
Sbjct: 226 RNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFI----QNKDLKSARQL 281
Query: 333 HSYIIKKGFYSNVPVCNAILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ K+ + + N LQ E+ +LF+ ML +P+ +TF + AC+ +A+L
Sbjct: 282 FDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAAL 341
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G Q+H I KT D FV + LM++Y KCG + AR +F+F + D++SW+ +I Y
Sbjct: 342 CEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAY 401
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G G EA+ L++ M+ +G +PN T VG+L+ACSH GLV+EGL+++ M + I+
Sbjct: 402 AHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVR 461
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENI 570
E +C+VDL +RAGR+ +A+ I+ VW +LL C +HGN +G AA+++
Sbjct: 462 DEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHL 521
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L+ +P N+ LLCNIYAS+GKW+E A + M RG++K PG SWIE+ K+H
Sbjct: 522 LEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVH 576
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 177/378 (46%), Gaps = 44/378 (11%)
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEM 270
+H+ N +A R+ DA +F + +D+ SW +M+ +++ L AR +F+
Sbjct: 39 NHVQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRP 98
Query: 271 ES-PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP--------------------- 308
++ N+ +W +++G A +EA +LF M +R ++
Sbjct: 99 DARRNVVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALF 158
Query: 309 DGLTVRS------LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFR 361
+ + VR LLC SL + ++ + + S + + + ++ + +
Sbjct: 159 NRMPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWV 218
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL-DVFVMNGLMDMY 420
LF M + + +++N ++ A +E L T + + DV N ++ +
Sbjct: 219 LFDAM----PERNVVSWNAMISGYARNHRIEEALDLF-----TKMPIRDVASWNIMITGF 269
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
++ L SAR+LF+ M +V++W++++ GY Q E ALKLF M G++PN VT +
Sbjct: 270 IQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFL 329
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
G L ACS++ + EG Q+++++ T S +++L A+ G + A + + +
Sbjct: 330 GSLDACSNLAALCEGQQVHQMICKTPSQFDTFV-ESTLMNLYAKCGEIRLARNVFD-FSM 387
Query: 541 DDDIVVWKSLLASCKTHG 558
+ D++ W ++A+ HG
Sbjct: 388 EKDLISWNGIIAAYAHHG 405
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 23/246 (9%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I+P+ T+ + ACS+L +L G++VH I + Q D + + ++N+Y KCG + AR
Sbjct: 321 IQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLAR 380
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFD +++++SW +IA + +G A+ LY M ++G P+ T+ ++ ACS
Sbjct: 381 NVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAG 440
Query: 196 CVGLGRQL-------HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
V G ++ ++ V++ EH + L+ + ++ R+ DA + S K +
Sbjct: 441 LVDEGLKIFESMVKDNSIVVRDEHYT------CLVDLCSRAGRLEDAKRLISWFKIKPTS 494
Query: 249 S--WGSMIDG------FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
S W +++ G S D A E E N ++ + AS EA + SE
Sbjct: 495 STVWSALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSE 554
Query: 301 MGDREL 306
M R L
Sbjct: 555 MNVRGL 560
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 269/497 (54%), Gaps = 42/497 (8%)
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A+ Y M + + D F S+++ACS + +G+++H +K+ S + NAL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY++ ++ A +F ++ +D+ SW +MI + T+F ++ SW +IAG
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYI------TLFYGFSQRSIVSWTAMIAG 206
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
C++ E LF M + + P+ +T+ SL+ +C ++ G ++H+YI++ GF +
Sbjct: 207 YIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS 266
Query: 345 VPVCNAILQH--QAGEL----------------------------------FRLFSLMLA 368
+ + A++ + GE+ F+LF M
Sbjct: 267 LALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD 326
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ +P+ +T ++ CA +L+MG H YI K G+ +DV + L+DMY KCG +
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISG 386
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A+ LF+ D D+ +W+ ++ GY G GE+ALKLF M + GV+PN +T +G L ACSH
Sbjct: 387 AQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSH 446
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLV EG L+ M +++G++P E C+VDLL RAG + EA I M +I +W
Sbjct: 447 AGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWG 506
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
++LA+CK H N ++G+ AA +L ++P N VL+ NIYA++ +W +VA + ++K+ G
Sbjct: 507 AMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTG 566
Query: 609 VRKVPGQSWIEIQTKIH 625
++K PG S IE+ +H
Sbjct: 567 IKKEPGMSSIEVNGLVH 583
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 193/375 (51%), Gaps = 32/375 (8%)
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS----WG 251
C+ +QLHAH+ ++ H +H +Q + + R A N ++ + + DI
Sbjct: 59 CLDQTQQLHAHITRT-HFNH--AQQVSFSPFESHPRY--ALNTYTYMRKLDIEVDSFIIP 113
Query: 252 SMIDGFSKLDFAR--------TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
S++ S++ AR +V N + S ++ N ++ + C + A LF +M +
Sbjct: 114 SVLKACSQISVARMGKEIHGFSVKNGLVS-DVFVVNALMQMYSECGSLVSARLLFDKMSE 172
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLF 363
R+++ +R+ + +L+ G S + + CN + + GE RLF
Sbjct: 173 RDVVSWSTMIRAYI-------TLFYGFSQRSIVSWTAMIAGYIRCNDL---EEGE--RLF 220
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
M+ P+ IT ++ +C + ++++G +LH YI++ G + + + L+DMY KC
Sbjct: 221 VRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKC 280
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
G + SAR +F+ M++ DV++W+++I YAQ C + A +LF +MR +GVRPN +T+V +L
Sbjct: 281 GEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLL 340
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
+ C+ G ++ G + + ++ G+ ++ ++D+ A+ G + A+ ++ A D D
Sbjct: 341 SLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRD 398
Query: 544 IVVWKSLLASCKTHG 558
I W ++A HG
Sbjct: 399 ICTWNVMMAGYGMHG 413
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 199/474 (41%), Gaps = 101/474 (21%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY-------------ADLISACSSLRSL 96
L + + + + + V+F +++ + + TY ++ ACS +
Sbjct: 66 LHAHITRTHFNHAQQVSFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVA 125
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP-------------- 142
++G+++H + + D + N ++ MY +CGSL AR++FD+M
Sbjct: 126 RMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAY 185
Query: 143 --------QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
QR++VSWTAMIAG + L+V+M++ + P+ T S+I +C +
Sbjct: 186 ITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFV 245
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
V LG++LHA+++++ G L AL+ MY K I A +F S+ KD+ +W +MI
Sbjct: 246 GAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMI 305
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+++ A+C + A LF +M D + P+ LT+
Sbjct: 306 SAYAQ--------------------------ANC--IDYAFQLFVQMRDNGVRPNELTMV 337
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------------- 353
SLL C +L G H+YI K+G +V + A++
Sbjct: 338 SLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDR 397
Query: 354 --------------HQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL- 397
H GE +LF+ M KP+ ITF + AC+ + G L
Sbjct: 398 DICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLF 457
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG 450
I GL V ++D+ + G L A ++ M P++ W +++
Sbjct: 458 EKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 282/517 (54%), Gaps = 47/517 (9%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
P+ V +L+ + G + +AR +F+EMP +N+VSW AMI + Q + A +L+++M
Sbjct: 231 PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEM 290
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA-HVIKSEHGSHLISQNALIAMYTKFDR 231
+ D ++ ++I V +G+ L A ++ ++ +Q A+I Y + R
Sbjct: 291 PEK----DSVSWTAMINGY-----VRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGR 341
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ +A +FS I+ +D W SMI G++ + D A +F EM ++ SWNT+IA A
Sbjct: 342 MDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQA 401
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
++A+ +F+EM +R ++ S SL G ++ G Y C
Sbjct: 402 GQMDKALEMFNEMQERNVV--------------SWNSLITG------YVQNGLYFEALNC 441
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
IL Q GE KPD T + A A +A+L +G QLH +KTG
Sbjct: 442 -FILMKQQGE-------------KPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGN 487
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+FV N ++ MY K G + A +F +++ DVVSW+SLI GYA GCG+EA++LF M
Sbjct: 488 DLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMP 547
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G+ P+ VT G+L+AC+H G V++GL L++ M Y I P E +CV++LL R GR+
Sbjct: 548 LRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRL 607
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA + + M +W +LL +C+ H N+++ K +AE +L ++P N++ VLL N++
Sbjct: 608 EEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMH 667
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A +G+W+ V R+ MKE K PG SWIEI ++H
Sbjct: 668 AEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLH 704
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 244/539 (45%), Gaps = 78/539 (14%)
Query: 92 SLRSLQLGR--KVHDHI--LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
+LR QLGR ++ + + + + V +N +++ Y K G + +AR +FD MPQRN+V
Sbjct: 19 NLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLV 78
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSG-----LMPDQFT-FGSIIRA----------- 190
SW +MIAG N A L+ +M + LM +T G + +A
Sbjct: 79 SWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQ 138
Query: 191 ---CSGLCCVGLGRQLHAHVIKSEHGSHL----ISQNALIAMYTKFDRILDAWNVFSSIA 243
C G ++ K L +S N++++ YTK ++ F ++
Sbjct: 139 DTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMG 198
Query: 244 RKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+++ SW M+DG+ LD A F ++ +PN+ SW T+++G A EA +LF+E
Sbjct: 199 ERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNE 258
Query: 301 MGDRELI---------------------------PDGLTVRSLLCACTSPLSLYQGMQIH 333
M + L+ D ++ +++ L Q +I
Sbjct: 259 MPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREIL 318
Query: 334 SYIIKKGFYSNVPVCNAILQH----QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+ + K + + N LQ +A E+F S+ D + +N ++ A
Sbjct: 319 NLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISV-------RDSVCWNSMITGYAHCG 371
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+ +L + + D+ N ++ Y + G + A E+FN M++ +VVSW+SLI
Sbjct: 372 RTDEALRL----FQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLIT 427
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
GY Q G EAL F M+ G +P+ T+V L A +++ + G+QL+ + + G
Sbjct: 428 GYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTI-KTGFG 486
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
++ ++ + A++GRV EAE+ ++ + D+V W SL+A +G GK A E
Sbjct: 487 NDLFVKNAILTMYAKSGRVPEAENVFAEIK-NKDVVSWNSLIAGYALNG---CGKEAVE 541
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 193/427 (45%), Gaps = 45/427 (10%)
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVF 267
E GS++ +QN I+ + RI +A VF + ++I ++ SMI ++K + AR +F
Sbjct: 10 EKGSYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELF 69
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL-SL 326
+ M NL SWN++IAG +A LF M R++ +L+ C + + L
Sbjct: 70 DLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYS-----WTLMITCYTRIGEL 124
Query: 327 YQGMQIHSYIIKKGFYSNVPVC-NAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGA 384
+ ++ + + K VC NA++ A + LFR + + +++N ++
Sbjct: 125 EKARELFNLLPDK----QDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSG 180
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
+++G Q + + +V N ++D YV G L SA F + P+VVSW
Sbjct: 181 YTKNGKMQLGLQFFEAMGER----NVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSW 236
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSG-----------VRPNHVTLVGVL-------TAC 486
+++ G+A +G EA LF M + VR N + L +
Sbjct: 237 VTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSV 296
Query: 487 SHVGLVEEGLQLYRIMQNE--YGIIPTRE--RRSCVVDLLARAGRVHEAEDFINQMAFDD 542
S ++ +++ +++Q ++P + ++ +++ ++GR+ EA + +Q++ D
Sbjct: 297 SWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRD 356
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
V W S++ G D R + ++ D + ++ YA +G+ ++ +
Sbjct: 357 S-VCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIA---AYAQAGQMDKALEMFN 412
Query: 603 SMKERGV 609
M+ER V
Sbjct: 413 EMQERNV 419
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 307/613 (50%), Gaps = 68/613 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ + + L EA+ F ++ T + T+ ++ AC+ L S LG++VH + +
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYT-LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN 455
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ N L+MY K G++ DA+ +F +P ++ +SW A+ G +QN +E A+ +
Sbjct: 456 CMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCML 515
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M G+ PD +F + I ACS + G+Q+H IK S+ ++LI +Y+K
Sbjct: 516 KRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK- 574
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
D+ S +R +F ++++ ++ N +IAG +
Sbjct: 575 --------------HGDVES-------------SRKIFAQVDASSIVPINALIAGFVQNN 607
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------- 341
N +EA+ LF ++ L P +T S+L C+ L+ G Q+H Y +K G
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 667
Query: 342 -------------------------YSNVPVCNAILQHQAGELFRLFSL-----MLASQT 371
+ N+ AI+ A + SL M
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 727
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+ D TF V+ AC+ + + G ++H I K+G + L+DMY KCG + S+ E
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 787
Query: 432 LFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
F +++ D++ W+S+IVG+A+ G +EAL LF++M ++P+ VT +GVL AC+H G
Sbjct: 788 AFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSG 847
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
L+ EG + M+ YG+ P + +C +DLL R G + EA++ I+Q+ F D VVW +
Sbjct: 848 LISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATY 907
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
LA+C+ H + + GK AA +++++P S+ VLL +++A++G W E SM+E+GV
Sbjct: 908 LAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVA 967
Query: 611 KVPGQSWIEIQTK 623
K PG SWI + K
Sbjct: 968 KFPGCSWITVGNK 980
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/569 (26%), Positives = 258/569 (45%), Gaps = 76/569 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST+A ++SA +++++ G+++H + + + + ++N+Y KCG DA+ VFD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
++N+V W AM+ G QN AI ++ M++ L D+FTF SI+ AC+ L LG
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 445
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H IK+ L NA + MY+K+ I DA +FS I KD
Sbjct: 446 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI------------ 493
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
SWN + G+A EA+ + M + PD ++ + + AC
Sbjct: 494 ----------------SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSN--------------------------------VPVC 348
++ + G QIH IK G SN VP+
Sbjct: 538 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPI- 596
Query: 349 NAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
NA++ + E +LF +L KP +TF+ ++ C+ + +G Q+HCY +K
Sbjct: 597 NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLK 656
Query: 404 TGLALDVFVMN-GLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVGYAQFGCGEEAL 461
+G+ D ++ L +Y+K L A +L M D ++ W+++I GYAQ G G+ +L
Sbjct: 657 SGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 716
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
F RMR VR + T VL ACS V +G +++ ++ G S ++D+
Sbjct: 717 VSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKS-GFGSYETATSALIDM 775
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG----KRAAENILKIDPTN 577
++ G V + + ++ DI+ W S++ +G D ++ E +K D
Sbjct: 776 YSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVT 835
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKE 606
+++ C SG E GSM++
Sbjct: 836 FLGVLIACT---HSGLISEGRHFFGSMRK 861
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/554 (24%), Positives = 240/554 (43%), Gaps = 77/554 (13%)
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
R Q R +H IL L + ++ +Y K G + A +R + ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 154 AGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ +++G + + + +G PDQF ++ ACS + + GRQ+H V+KS
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 189
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF--------------- 257
S + + AL+ MY K + +A VF IA D W SMI +
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 249
Query: 258 -----------------------SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
+LD A + +M +P+ +WN +I+G A
Sbjct: 250 MDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV 309
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+ L+ +M L P T S+L A + + +G Q+H+ + G +NV V ++++
Sbjct: 310 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 369
Query: 355 QAG------------------------------------ELFRLFSLMLASQTKPDHITF 378
A E R+F M+ + D TF
Sbjct: 370 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 429
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++GAC ++S +G Q+HC +K + + +FV N +DMY K G++G A+ LF+ +
Sbjct: 430 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 489
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D +SW++L VG AQ EEA+ + +RMR G+ P+ V+ + ACS++ E G Q+
Sbjct: 490 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + +YGI S ++DL ++ G V + Q+ IV +L+A +
Sbjct: 550 H-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVD-ASSIVPINALIAGFVQNN 607
Query: 559 NVDVGKRAAENILK 572
N D + + +LK
Sbjct: 608 NEDEAIQLFQQVLK 621
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 224/522 (42%), Gaps = 94/522 (18%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + + L AF +++ R A ++SACS + L GR+VH ++ S
Sbjct: 128 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 187
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+++MY KCG + +AR VFD + + + W++MIA + G A+ L+
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 247
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH-VIKSEHGSHLISQNALIAMYTK 228
+M + G PDQ T +II + GR HA ++K ++ NA+I+ + +
Sbjct: 248 SRMDKMGSAPDQVTLVTIISTLA-----SSGRLDHATALLKKMPTPSTVAWNAVISGHAQ 302
Query: 229 FDRILDAWNVFSSIARKDITSWG------------------------------------- 251
+ ++ KD+ SWG
Sbjct: 303 SGLEFNVLGLY-----KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 252 -------SMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
S+I+ ++K A+ VF+ N+ WN ++ G EA+ +F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA----- 356
L D T S+L ACT S Y G Q+H IK ++ V NA L +
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477
Query: 357 GELFRLFSLMLASQT-------------------------------KPDHITFNDVMGAC 385
G+ LFSL+ + PD ++F+ + AC
Sbjct: 478 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+ + + E G Q+HC +K G+ + V + L+D+Y K G + S+R++F ++ +V +
Sbjct: 538 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
+LI G+ Q +EA++LF+++ G++P+ VT +L+ CS
Sbjct: 598 ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LH I++ G L + + L+++Y K G +G A + + + SSL+ +A+ G
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 457 GEEALKLFRRMR-SSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRER 514
+ L FR +R ++G RP+ L VL+ACS VG++ G Q++ ++++ G +
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS--GFSSSVFC 195
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+ +VD+ A+ G V A + +A D I W S++A + V + A ++D
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTI-CWSSMIA---CYHRVGCYQEALALFSRMD 251
Query: 575 PTNSA----ALVLLCNIYASSGKWEEVARLMGSM 604
SA LV + + ASSG+ + L+ M
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 286/547 (52%), Gaps = 53/547 (9%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-----SLEDARMVFDE 140
L + C++ SL ++ H IL + D+ + ++ Y S E + VFD
Sbjct: 39 LNTQCTT--SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDF 96
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ + NV W MI C +N + AI LY +M+ + P+++T+ ++++ACS V G
Sbjct: 97 VRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEG 156
Query: 201 RQLHAHVIKSEHGS--HLISQNALIAMYTKFDRILDAWNVFSSIARK-DITSWGSMIDG- 256
Q+HAH++K G H++S + I MY F R+++A + + D W +MIDG
Sbjct: 157 VQVHAHLVKHGLGGDGHILS--SAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGY 214
Query: 257 --FSKLDFARTVFNEMESPNL-ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
F +++ AR +F M ++ ++WN +I+G + C A F EM +R+ I
Sbjct: 215 LRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS----- 269
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKP 373
+ M I YI + F E +F M + +P
Sbjct: 270 -------------WSAM-IDGYIQEGCFM---------------EALEIFHQMQKEKIRP 300
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
V+ ACA + +L+ G +H Y + + LD + L+DMY KCG + A E+F
Sbjct: 301 RKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVF 360
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
M + +V SW+++I G A G E+A+ LF +M + PN +T VGVL AC+H GLV+
Sbjct: 361 EKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQ 417
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+GL ++ M+ EYG+ P E C+VDLL RAG + EAE ++ + + VW +LL +
Sbjct: 418 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 477
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C+ HGNV++G+R + +L+++P NS LL NIYA +G+WEEV + MKERG++ P
Sbjct: 478 CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTP 537
Query: 614 GQSWIEI 620
G S I++
Sbjct: 538 GTSIIDL 544
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 182/444 (40%), Gaps = 123/444 (27%)
Query: 36 DSFLRRFDDIWDFDLF-----SSLCKQN--------LYNEALVAFDFLQNNTNFRIRPST 82
+S LR FD + ++F +C +N LY E +VA +FR T
Sbjct: 88 ESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVA--------HFRPNKYT 139
Query: 83 YADLISACSSLRSLQLGRKVH-----------DHILSSKC-------------------- 111
Y ++ ACS + G +VH HILSS
Sbjct: 140 YPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKG 199
Query: 112 -QPDAVLHNHILNMYGKCGSLEDARMVFDEMP---------------------------- 142
+ DAV N +++ Y + G +E AR +F+ MP
Sbjct: 200 GEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFF 259
Query: 143 ----QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+R+ +SW+AMI G Q G A+E++ QM + + P +F S++ AC+ L +
Sbjct: 260 DEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALD 319
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GR +H + ++ + +L+ MY K RI AW VF ++ K+++SW
Sbjct: 320 QGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSW-------- 371
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
N +I G+A A +A+ LFS+M ++ P+ +T +L
Sbjct: 372 --------------------NAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLN 408
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKP 373
AC + +G+ I + + K+ Y P C L +AG L ++ + T+P
Sbjct: 409 ACAHGGLVQKGLTIFNSMRKE--YGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEP 466
Query: 374 DHITFNDVMGACAAMASLEMGTQL 397
+ ++GAC ++E+G ++
Sbjct: 467 TPAVWGALLGACRKHGNVELGERV 490
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 39/345 (11%)
Query: 19 WDA----FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
W+A F C +++ A E D R + W + ++ + EAL F +Q
Sbjct: 239 WNAMISGFSRCGMVEVAREFFDEMKERDEISWS-AMIDGYIQEGCFMEALEIFHQMQKE- 296
Query: 75 NFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
+IRP + ++SAC++L +L GR +H + + Q D VL +++MY KCG ++
Sbjct: 297 --KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRID 354
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
A VF++M + V SW AMI G + +G+ AI+L+ +M + P++ TF ++ AC+
Sbjct: 355 LAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACA 411
Query: 193 GLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS- 249
V G + + ++ E+G + ++ + + + +A V SSI + +
Sbjct: 412 HGGLVQKGLTIF-NSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAV 470
Query: 250 WGSMIDGFSKL------DFARTVFNEMESPNLASW---NTIIAGVASCSNANEAMSLFSE 300
WG+++ K + + E+E N + + I A E L E
Sbjct: 471 WGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKE 530
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
G + TS + L +G ++H +II G + V
Sbjct: 531 RGIK------------TTPGTSIIDLGRG-EVHKFIIGDGSHPQV 562
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/655 (30%), Positives = 314/655 (47%), Gaps = 119/655 (18%)
Query: 83 YADLISACSSLRSLQLGRKVHDHIL--SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ L+ C R+L LG+ +H H+L S VL N + +Y C +E AR VFDE
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 141 MPQR--NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+P N ++W MI + N A++LY +ML SG+ P ++T+ +++AC+GL +
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTK----------FD----RILDAWN------- 237
G+ +H+HV S+ + + AL+ Y K FD R + AWN
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 238 ------------------------------VFSSIARKDITSWGSMIDGFSK-------- 259
+F ++ R G + G+
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 260 ------LD---------FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--G 302
LD +AR VF+ N +W+ +I G EA +F +M
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----- 357
D + + + +L C L G +H Y +K GF ++ V N I+ A
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 358 -------------------------------ELFRLFSLMLASQTKPDHITFNDVMGACA 386
E FRLF M S +PD T V+ AC+
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+A+L G+ H Y + G A++ + N LMDMY KCG L A+ +F+ M D+VSW++
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM-QNE 505
++ G+ G G+EAL LF M+ +GV P+ VTL+ +L+ACSH GLV+EG QL+ M + +
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
+ +IP + +C+ DLLARAG + EA DF+N+M F+ DI V +LL++C T+ N ++G
Sbjct: 541 FNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNE 600
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
++ + + T + +LVLL N Y+++ +WE+ AR+ K+RG+ K PG SW+++
Sbjct: 601 VSKKMQSLGET-TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
V F L N+ + P ++ C+ L GR VH + + + D + N I++
Sbjct: 293 VFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISF 352
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y K GSL DA F E+ ++V+S+ ++I GC N + + L+ +M SG+ PD T
Sbjct: 353 YAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTL 412
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
++ ACS L +G G H + + + + NAL+ MYTK ++ A VF ++ +
Sbjct: 413 LGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK 472
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+DI SW +M+ GF I G+ EA+SLF+ M +
Sbjct: 473 RDIVSWNTMLFGFG-----------------------IHGL-----GKEALSLFNSMQET 504
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGEL 359
+ PD +T+ ++L AC+ + +G Q+ + + +G ++ +P C L +AG L
Sbjct: 505 GVNPDEVTLLAILSACSHSGLVDEGKQLFNS-MSRGDFNVIPRIDHYNCMTDLLARAGYL 563
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
+ + +PD ++ AC + E+G ++ + G + V+
Sbjct: 564 DEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVL 617
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/500 (33%), Positives = 268/500 (53%), Gaps = 39/500 (7%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N ++ Y + + +FD+MP ++ VSW M++G + ++QM ++G++
Sbjct: 44 NMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVV 103
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P+ +T +++RA L RQ+HA H ++ ++LI Y
Sbjct: 104 PNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRA 163
Query: 239 FSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F+ I+ KD+TSW +++ + +L A+T F++M N+ SW T++ G N+A
Sbjct: 164 FNDISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKAR 223
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ 355
S+F +M +R ++ + M I Y+ K F
Sbjct: 224 SVFDDMSERNVVS------------------WTAM-ISGYVQNKRFV------------- 251
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
+ +LF LM ++T+P+H TF+ V+ ACA +SL MG QLH I+K+G+A DV +
Sbjct: 252 --DALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTS 309
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+DMY KCG + +A +F + D ++VSW+++I GYA G AL+ F RM+ G P+
Sbjct: 310 LVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT-PD 368
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
VT V VL+AC H GLVEEG + + M +YGI E SC+VDL RAGR EAE+ I
Sbjct: 369 EVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLI 428
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWE 595
M F+ D+V+W +LLA+C H N+++G+ AAE I +++ ++ + +L I G W
Sbjct: 429 KNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWS 488
Query: 596 EVARLMGSMKERGVRK-VPG 614
V L +MKERG++K PG
Sbjct: 489 SVNELRDTMKERGIKKQTPG 508
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 152/346 (43%), Gaps = 69/346 (19%)
Query: 84 ADLISACSSLRSLQ-LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ LI A + L+ + LGR +D +S K D N +++ Y + G DA+ FD+MP
Sbjct: 145 SSLIRAYAGLKEEEALGRAFND--ISMK---DVTSWNALVSSYMELGKFVDAQTAFDQMP 199
Query: 143 QR-------------------------------NVVSWTAMIAGCSQNGQENAAIELYVQ 171
QR NVVSWTAMI+G QN + A++L+V
Sbjct: 200 QRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVL 259
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M ++ P+ FTF S++ AC+G + +G QLH +IKS + +I +L+ MY K
Sbjct: 260 MFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGD 319
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ A+ VF SI K++ SW N II G AS A
Sbjct: 320 MDAAFGVFESIRDKNLVSW----------------------------NAIIGGYASHGLA 351
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ-IHSYIIKKGFYSNVP--VC 348
A+ F M PD +T ++L AC + +G + + K G + + C
Sbjct: 352 TRALEEFDRMKVVG-TPDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSC 410
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
L +AG +L+ +PD + + ++ AC ++LE+G
Sbjct: 411 MVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLELG 456
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 139/293 (47%), Gaps = 16/293 (5%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+++A V D R W + S + + +AL F L T R T++ ++
Sbjct: 219 VNKARSVFDDMSERNVVSWT-AMISGYVQNKRFVDALKLF-VLMFKTETRPNHFTFSSVL 276
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
AC+ SL +G ++H I+ S D + +++MY KCG ++ A VF+ + +N+V
Sbjct: 277 DACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLV 336
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW A+I G + +G A+E + +M G PD+ TF +++ AC V G + H
Sbjct: 337 SWNAIIGGYASHGLATRALEEFDRMKVVG-TPDEVTFVNVLSACVHAGLVEEGEK-HFTD 394
Query: 208 IKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG---FSKL- 260
+ +++G + + + ++ +Y + R +A N+ ++ D+ WG+++ S L
Sbjct: 395 MLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLE 454
Query: 261 --DFARTVFNEMESPNLASWNTI--IAGVASC-SNANEAMSLFSEMGDRELIP 308
++A +ES + S++ + I G S+ NE E G ++ P
Sbjct: 455 LGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQTP 507
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q H + + L+ ++ N +M Y++ +G +LF+ M D VSW+ ++ G+ +
Sbjct: 26 QAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTR 85
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
E + F +M +GV PN T+ +L A
Sbjct: 86 NSEGLYRCFLQMGRAGVVPNDYTISTLLRA 115
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/577 (31%), Positives = 290/577 (50%), Gaps = 61/577 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILNMYGKCGSLEDARMVFDE 140
+Y L+ C + +++ H+ QP D L N +L++Y K G+L DAR +FD+
Sbjct: 24 SYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDK 83
Query: 141 MPQRNVVSWTAM-------------------------------IAGCSQNGQENAAIELY 169
M +R+V SW AM IAG S NG + A+E +
Sbjct: 84 MSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFF 143
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
V+M + G +T S++ ACS L + G+Q+H ++ + G + NAL MY K
Sbjct: 144 VRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKC 203
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
LD AR +F+ M + N+ SWN++I+G
Sbjct: 204 ----------------------------GALDQARWLFDRMVNKNVVSWNSMISGYLQNG 235
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
LF EM L+PD +T+ ++L A + + + I +K +
Sbjct: 236 QPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMV 295
Query: 350 AILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
Q+ E LF ML +PD+ T + V+ +CA +ASL G +H + G+
Sbjct: 296 GCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDH 355
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ V + L+DMY KCG A +F M +V+SW+S+I+GYAQ G EAL L+ M
Sbjct: 356 DLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEML 415
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
++P+++T VGVL+AC H GLVE G + + +G+ PT + SC+++LL RAG +
Sbjct: 416 HENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYM 475
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
+A D I M F+ + ++W +LL+ C+ + +V+ G+ AA ++ ++DP N+ ++L NIY
Sbjct: 476 DKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIY 535
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A+ G+W++VA + MK ++K SWIEI ++H
Sbjct: 536 AACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVH 572
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 181/474 (38%), Gaps = 120/474 (25%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
++AL F +Q F T+ ++ ACS L ++ G+++H I+++ + N
Sbjct: 137 SQALEFFVRMQEE-GFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNA 195
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+ NMY KCG+L+ AR +FD M +NVVSW +MI+G QNGQ +L+ +M SGLMPD
Sbjct: 196 LTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPD 255
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
Q T +I+ A Y + I +A F
Sbjct: 256 QVTISNILSA-----------------------------------YFQCGYIDEACKTFR 280
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
I KD W T++ G A +A+ LF E
Sbjct: 281 EIKEKD----------------------------KVCWTTMMVGCAQNGKEEDALLLFRE 312
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS-------------------------- 334
M + PD T+ S++ +C SL QG +H
Sbjct: 313 MLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGE 372
Query: 335 -----YIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGA 384
+ K+ NV N+++ A E L+ ML KPD+ITF V+ A
Sbjct: 373 TADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSA 432
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV-------KCGSLGSARELFNFME 437
C +E G I K + MN D Y + G + A +L M
Sbjct: 433 CMHAGLVERGQGYFYSISK------IHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMT 486
Query: 438 -DPDVVSWSSLIVGYAQFGC----GEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
+P+ + WS+L+ + C GE A + + P ++ L + AC
Sbjct: 487 FEPNCLIWSTLL-SVCRINCDVNNGEMAARHLFELDPHNAGP-YIMLSNIYAAC 538
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
Query: 55 CKQNLYNE-ALVAFD--FLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSS 109
C QN E AL+ F L+N +RP T + ++S+C+ L SL G+ VH +
Sbjct: 297 CAQNGKEEDALLLFREMLLEN-----VRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
D ++ + +++MY KCG DA +VF M RNV+SW +MI G +QNG++ A+ LY
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411
Query: 170 VQMLQSGLMPDQFTFGSIIRAC--SGLCCVGLG 200
+ML L PD TF ++ AC +GL G G
Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQG 444
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 293/574 (51%), Gaps = 68/574 (11%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R Y +L+ + + + G +H + + L NH+LNMY KC L A +F
Sbjct: 4 REELYINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLF 63
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCV 197
DEMP+RNVVSW++++ GC NG + A+ L+ M + G + P++FTF S ++ACS V
Sbjct: 64 DEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENV 123
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
Q+++ V++S ++ NA + + ++ +A +F + +D +W +M+ G+
Sbjct: 124 TQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGY 183
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSL 316
L+F+ +E + +F +RE + PD T S
Sbjct: 184 --LEFS----------------------------SEQIPVFWRYMNREGVKPDEFTFASA 213
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAGELFRLF-------- 363
L + SL GMQ+H+ +++ G+ ++ V N+++ + E F+ F
Sbjct: 214 LTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDV 273
Query: 364 -----------------------SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ M KP+ T + ACA +AS+E G Q H
Sbjct: 274 CSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGL 333
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K G +DV V N L+DMY KCG + SA +F VVSW+++I+ AQ G EA
Sbjct: 334 RIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEA 393
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L++F M+ + V PN++T + VL ACS G V+EG + M +YGIIP + C+V
Sbjct: 394 LQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVS 453
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
+L RAG + EA++ I +M F + VW++LL++C+ HG+V+ GK AAE+ +K D + ++
Sbjct: 454 ILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSS 513
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
VLL N+ A + W+ V L M+ R V+KVPG
Sbjct: 514 YVLLSNMLAETSNWDCVVSLRELMETRNVKKVPG 547
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
+E + F N + T+A ++ +++ SL++G +VH ++ S D + N
Sbjct: 188 SEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNS 247
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++MY K LE+ FDE+P ++V SWT M GC Q G+ A+ + +M + G+ P+
Sbjct: 248 LVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPN 307
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+FT + + AC+ L + G+Q H IK + NAL+ MY K + AW VF
Sbjct: 308 KFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFR 367
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
S + + SW T+I A EA+ +F E
Sbjct: 368 STNSRSVV----------------------------SWTTMIMACAQNGQPGEALQIFDE 399
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQ 355
M + + P+ +T +L AC+ + +G + S + K Y +P +C + +
Sbjct: 400 MKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKD--YGIIPGEDHYICMVSILGR 457
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
AG + L+L P + ++ AC +E G
Sbjct: 458 AGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETG 496
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 289/525 (55%), Gaps = 11/525 (2%)
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
V+ N +L+ Y K G + AR VF EMP R+ +++ AMI GCS+ G+ A+EL+ M +
Sbjct: 169 VVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRRE 228
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ FTF S++ +G+ + LGRQ+H +++ ++ NAL+ Y+K D + D
Sbjct: 229 GVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDL 288
Query: 236 WNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+F ++ +D S+ MI S A +F +M++ A + S + A
Sbjct: 289 KQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGAL 348
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM-----QIHSYIIKKGFYSNVPV 347
+ + ++ +LI GLT+ + + GM I +Y K S +
Sbjct: 349 PHIKIGRQI-HAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTAL 407
Query: 348 CNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+Q+ Q E +LF M + PD T + +M + +++A + +G QLH Y+ K+G
Sbjct: 408 ITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGH 467
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
VF + L+DMY KCG L A FN M + + ++W+++I YAQ+G + A+++F
Sbjct: 468 MPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDS 527
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M G+ P+ VT + VL AC H GL EE ++ + +M+ Y + P +E SCV+D L RAG
Sbjct: 528 MLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAG 587
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ + I++M F+DD ++W S+L SC+ +GN D+ AAE + + PT++ A V+L N
Sbjct: 588 CFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYVILSN 647
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGND 630
IYA +G WE AR+ M++RGV+K G SW+EI+ KI+ S ND
Sbjct: 648 IYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQKIYMFSSND 692
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 218/488 (44%), Gaps = 84/488 (17%)
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGR 201
+RN +WT M+ +G+ + A+ L+ ML+ G PD T +++ C VG
Sbjct: 99 RRNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPG--CDVG--- 153
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH V K G+ ++ N L+ Y K I A VF + +D ++ +MI G S+
Sbjct: 154 TLHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQ- 212
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
EA+ LF+ M + T SLL T
Sbjct: 213 ---------------------------GRHGEALELFAAMRREGVDTSHFTFSSLLTVAT 245
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHI 376
+ L+ G QIH ++ NV V NA+L + G+L +LF M ++ D++
Sbjct: 246 GMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEM----SERDNV 301
Query: 377 TFNDVMGACA-----------------------------------AMASLEMGTQLHCYI 401
++N ++ AC+ A+ +++G Q+H +
Sbjct: 302 SYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGRQIHAQL 361
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+ GL L+ FV N L+DMY KCG L +A+ +F + D +SW++LI G Q G EEAL
Sbjct: 362 ILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEAL 421
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+LF MR +G+ P+ T ++ + S + ++ G QL+ + G +P+ S ++D+
Sbjct: 422 QLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKS-GHMPSVFSGSALLDM 480
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI----DPTN 577
A+ G + EA N+M + + + W +++++ +G R +++L DP
Sbjct: 481 YAKCGCLDEAIRTFNEMP-EKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVT 539
Query: 578 SAALVLLC 585
+++ C
Sbjct: 540 FLSVLAAC 547
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 214/495 (43%), Gaps = 59/495 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNE-ALVAFDFLQNNTNFRI 78
D + C L ++ D R D +++ S C N AL F +Q F
Sbjct: 277 DFYSKCDSLGDLKQLFDEMSER--DNVSYNVMISACSWNRCGGMALQLFRDMQT-LGFDR 333
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R YA L+S +L +++GR++H ++ + + N +++MY KCG L+ A+ +F
Sbjct: 334 RTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIF 393
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+ +SWTA+I GC QNGQ A++L+ M ++GL PD+ T SI+++ S L +G
Sbjct: 394 AYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIG 453
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
+GRQLHA++ KS H + S +AL+ MY K + +A F+ + K
Sbjct: 454 IGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEK------------- 500
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
N +WN +I+ A A A+ +F M L PD +T S+L
Sbjct: 501 ---------------NSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLA 545
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKP 373
AC + M+ + + + +YS P C +AG ++ ++ +
Sbjct: 546 ACGHNGLAEECMKY--FDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFED 603
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D I ++ ++ +C + ++ T + + T + D L ++Y K G+ A +
Sbjct: 604 DPIIWSSILHSCRIYGNQDLAT-VAAEKLFTMVPTDATAYVILSNIYAKAGNWEGAARVK 662
Query: 434 NFMEDPDVV-----SWSSLIVGYAQFGCGE-----------EALKLFRRMRSSGVRPNH- 476
M D V SW + F + E +L+ M G P+
Sbjct: 663 KIMRDRGVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELERLYEEMDKQGYEPDTS 722
Query: 477 --VTLVGVLTACSHV 489
+ +V ++ C HV
Sbjct: 723 CALHMVSMVFYCIHV 737
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/604 (29%), Positives = 307/604 (50%), Gaps = 73/604 (12%)
Query: 65 VAFDF---LQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
V F+F L +N R+ P +A ++ L+ LQ ++H I++S + L N
Sbjct: 4 VNFNFYRHLSSNPTQRLSPLAQPHASILRKLKDLKPLQ---QIHAQIITSGLTHNTFLSN 60
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++N Y CG L DA+ +F P +NVVSWT +I+G ++N AI+++ +M+ P
Sbjct: 61 SLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKP 120
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+ T S++ A + L + + + +H ++ ++ + AL+ MY+KF + A +F
Sbjct: 121 NAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLF 180
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
S++ +++ +W +++ G+S F+ EA+ LF+
Sbjct: 181 ESMSERNVVTWNAIVSGYSDHGFSE----------------------------EAIDLFN 212
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------ 353
M + L+ D T+ SL+ A S L G IH +II+ G+ ++ + A++
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 354 --HQAGELF----------------------------RLFSLMLASQT-KPDHITFNDVM 382
A +F + F+ ML Q K D I ++
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
+C+ +L+ G ++H +KT A ++FV + ++DMY CG+L A+ F M + DVV
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W+++I G G G +A+ LF +M+ SG+ P+ T V VL ACSH G+V EGLQ++ M
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+IP + +CV+D+L RAG++ A FIN M F D V+ +LL +C+ HGN+ +
Sbjct: 453 VKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
G ++ I +++P ++ VLL N+YA +G WE V S++ + ++K PG S IEI
Sbjct: 513 GHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQ 572
Query: 623 KIHA 626
+I+
Sbjct: 573 EIYT 576
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 209/468 (44%), Gaps = 69/468 (14%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+A+ C LL A ++ + W L S L K + + EA+ F + NF+
Sbjct: 64 NAYVYCGLLADAKQIFHHTPYKNVVSWTI-LISGLAKNDCFVEAIDVFREMIMG-NFKPN 121
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T + ++ A ++L +++ + VH + + + + +++MY K G + AR +F+
Sbjct: 122 AVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFE 181
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M +RNVV+W A+++G S +G AI+L+ M + GL+ D +T S+I A + C+ +
Sbjct: 182 SMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQV 241
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G +H +I++ + + + AL+ +Y + + DA VFS ++ KD+ +W M+ GFS
Sbjct: 242 GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFS- 300
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLC 318
S + + A+ F++M G + L D + + +L
Sbjct: 301 ---------------------------SGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------------------- 357
+C+ +L QG ++H+ IK F +N+ V +A++ A
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393
Query: 358 ---------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+ LF M S PD TF V+ AC+ + G Q+ +++
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453
Query: 403 KTGLALDVFVMNG-LMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
KT + ++D+ + G L +A N M PD +S+L+
Sbjct: 454 KTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLL 501
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/581 (29%), Positives = 302/581 (51%), Gaps = 64/581 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T A +S ++ L G ++H + + + + N +++MY KC L+D +F
Sbjct: 248 ATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGL 307
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+ ++V+W MI+GC QNG + A+ L+ M +SG+ PD T S++ A + L G
Sbjct: 308 MPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQG 367
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
++LH +++++ + +AL+ +Y K + A +V+ S D+ +MI G+
Sbjct: 368 KELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGY--- 424
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
V N M + EA+ +F + ++ + P+ + + S+L AC
Sbjct: 425 -----VLNGM--------------------SQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----------------------- 357
S ++ G ++HSY +K + V +A++ A
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWN 519
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E LF M K ++T + V+ ACA++ ++ G ++H ++K
Sbjct: 520 SMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG 579
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
+ D+F + L+DMY KCG+L A +F M + + VSW+S+I Y +G +E++ L
Sbjct: 580 PIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLL 639
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
R M+ G + +HVT + +++AC+H G V+EGL+L+R M EY I P E +C+VDL +R
Sbjct: 640 RHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSR 699
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG++ +A + I M F D +W +LL +C+ H NV++ + A++ + K+DP NS VL+
Sbjct: 700 AGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLM 759
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NI A +G+W+ V+++ MK+ V+K+PG SW+++ H
Sbjct: 760 SNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSH 800
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 154/568 (27%), Positives = 259/568 (45%), Gaps = 79/568 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +C++L ++ LGR VH + D + + ++ MY G L DAR VFD M
Sbjct: 148 TFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGM 207
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+R+ V W M+ G + G ++A+EL+ M SG P+ T + + + G
Sbjct: 208 AERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGV 267
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH +K S + N L++MY K + D W +F + R D+ +W MI G +
Sbjct: 268 QLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNG 327
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F ++A+ LF +M + PD +T+ SLL A T
Sbjct: 328 F----------------------------VDQALLLFCDMQKSGIRPDSVTLVSLLPALT 359
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNA------------------------------- 350
QG ++H YI++ + +V + +A
Sbjct: 360 DLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGST 419
Query: 351 -----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L + E ++F +L +P+ + V+ ACA+MA++++G +LH Y +K
Sbjct: 420 MISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNA 479
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+V + LMDMY KCG L + +F+ + D V+W+S+I +AQ G EEAL LFR
Sbjct: 480 YEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFR 539
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE---RRSCVVDLL 522
M GV+ ++VT+ VL+AC+ + + G +++ ++ P R S ++D+
Sbjct: 540 EMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG----PIRADLFAESALIDMY 595
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNS 578
+ G + A M ++ V W S++AS +G +V + + E K D
Sbjct: 596 GKCGNLEWAHRVFESMPEKNE-VSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTF 654
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKE 606
ALV C A +G+ +E RL M E
Sbjct: 655 LALVSAC---AHAGQVQEGLRLFRCMTE 679
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 315 SLLCACTSPLSLYQGMQIHS---------------------YIIKKGFYSNVPVCNAILQ 353
++L C SP L G+Q+H Y++ + F V V +++ +
Sbjct: 44 AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103
Query: 354 ---------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+++ LF L S PD TF V+ +CAA+ ++
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G +H GL D+FV + L+ MY G L AR++F+ M + D V W+ ++ GY
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
+ G A++LF MR+SG PN TL L+ + + G+QL+ + +YG+
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLH-TLAVKYGLESEV 282
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ +V + A+ + + M DD+V W +++ C +G VD
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGCVQNGFVD 330
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 307/613 (50%), Gaps = 68/613 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ + + L EA+ F ++ T + T+ ++ AC+ L S LG++VH + +
Sbjct: 407 MLTGFVQNELPEEAIRMFQYMMRYT-LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN 465
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ N L+MY K G++ DA+ +F +P ++ +SW A+ G +QN +E A+ +
Sbjct: 466 CMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCML 525
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M G+ PD +F + I ACS + G+Q+H IK S+ ++LI +Y+K
Sbjct: 526 KRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK- 584
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
D+ S +R +F ++++ ++ N +IAG +
Sbjct: 585 --------------HGDVES-------------SRKIFAQVDASSIVPINALIAGFVQNN 617
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------- 341
N +EA+ LF ++ L P +T S+L C+ L+ G Q+H Y +K G
Sbjct: 618 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 677
Query: 342 -------------------------YSNVPVCNAILQHQAGELFRLFSL-----MLASQT 371
+ N+ AI+ A + SL M
Sbjct: 678 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 737
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+ D TF V+ AC+ + + G ++H I K+G + L+DMY KCG + S+ E
Sbjct: 738 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFE 797
Query: 432 LFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
F +++ D++ W+S+IVG+A+ G +EAL LF++M ++P+ VT +GVL AC+H G
Sbjct: 798 AFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSG 857
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
L+ EG + M+ YG+ P + +C +DLL R G + EA++ I+Q+ F D VVW +
Sbjct: 858 LISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATY 917
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
LA+C+ H + + GK AA +++++P S+ VLL +++A++G W E SM+E+GV
Sbjct: 918 LAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVA 977
Query: 611 KVPGQSWIEIQTK 623
K PG SWI + K
Sbjct: 978 KFPGCSWITVGNK 990
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/569 (26%), Positives = 258/569 (45%), Gaps = 76/569 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST+A ++SA +++++ G+++H + + + + ++N+Y KCG DA+ VFD
Sbjct: 336 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 395
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
++N+V W AM+ G QN AI ++ M++ L D+FTF SI+ AC+ L LG
Sbjct: 396 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 455
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H IK+ L NA + MY+K+ I DA +FS I KD
Sbjct: 456 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSI------------ 503
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
SWN + G+A EA+ + M + PD ++ + + AC
Sbjct: 504 ----------------SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 547
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSN--------------------------------VPVC 348
++ + G QIH IK G SN VP+
Sbjct: 548 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPI- 606
Query: 349 NAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
NA++ + E +LF +L KP +TF+ ++ C+ + +G Q+HCY +K
Sbjct: 607 NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLK 666
Query: 404 TGLALDVFVMN-GLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVGYAQFGCGEEAL 461
+G+ D ++ L +Y+K L A +L M D ++ W+++I GYAQ G G+ +L
Sbjct: 667 SGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 726
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
F RMR VR + T VL ACS V +G +++ ++ G S ++D+
Sbjct: 727 VSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKS-GFGSYETATSALIDM 785
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG----KRAAENILKIDPTN 577
++ G V + + ++ DI+ W S++ +G D ++ E +K D
Sbjct: 786 YSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVT 845
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKE 606
+++ C SG E GSM++
Sbjct: 846 FLGVLIACT---HSGLISEGRHFFGSMRK 871
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/554 (24%), Positives = 240/554 (43%), Gaps = 77/554 (13%)
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
R Q R +H IL L + ++ +Y K G + A +R + ++++
Sbjct: 80 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 139
Query: 154 AGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ +++G + + + +G PDQF ++ ACS + + GRQ+H V+KS
Sbjct: 140 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 199
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF--------------- 257
S + + AL+ MY K + +A VF IA D W SMI +
Sbjct: 200 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 259
Query: 258 -----------------------SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
+LD A + +M +P+ +WN +I+G A
Sbjct: 260 MDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV 319
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
+ L+ +M L P T S+L A + + +G Q+H+ + G +NV V ++++
Sbjct: 320 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 379
Query: 355 QAG------------------------------------ELFRLFSLMLASQTKPDHITF 378
A E R+F M+ + D TF
Sbjct: 380 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 439
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++GAC ++S +G Q+HC +K + + +FV N +DMY K G++G A+ LF+ +
Sbjct: 440 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 499
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D +SW++L VG AQ EEA+ + +RMR G+ P+ V+ + ACS++ E G Q+
Sbjct: 500 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 559
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + +YGI S ++DL ++ G V + Q+ IV +L+A +
Sbjct: 560 H-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVD-ASSIVPINALIAGFVQNN 617
Query: 559 NVDVGKRAAENILK 572
N D + + +LK
Sbjct: 618 NEDEAIQLFQQVLK 631
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 224/522 (42%), Gaps = 94/522 (18%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + + L AF +++ R A ++SACS + L GR+VH ++ S
Sbjct: 138 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 197
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+++MY KCG + +AR VFD + + + W++MIA + G A+ L+
Sbjct: 198 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 257
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH-VIKSEHGSHLISQNALIAMYTK 228
+M + G PDQ T +II + GR HA ++K ++ NA+I+ + +
Sbjct: 258 SRMDKMGSAPDQVTLVTIISTLA-----SSGRLDHATALLKKMPTPSTVAWNAVISGHAQ 312
Query: 229 FDRILDAWNVFSSIARKDITSWG------------------------------------- 251
+ ++ KD+ SWG
Sbjct: 313 SGLEFNVLGLY-----KDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 367
Query: 252 -------SMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
S+I+ ++K A+ VF+ N+ WN ++ G EA+ +F M
Sbjct: 368 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 427
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA----- 356
L D T S+L ACT S Y G Q+H IK ++ V NA L +
Sbjct: 428 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 487
Query: 357 GELFRLFSLMLASQT-------------------------------KPDHITFNDVMGAC 385
G+ LFSL+ + PD ++F+ + AC
Sbjct: 488 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 547
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+ + + E G Q+HC +K G+ + V + L+D+Y K G + S+R++F ++ +V +
Sbjct: 548 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 607
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
+LI G+ Q +EA++LF+++ G++P+ VT +L+ CS
Sbjct: 608 ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 649
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LH I++ G L + + L+++Y K G +G A + + + SSL+ +A+ G
Sbjct: 88 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147
Query: 457 GEEALKLFRRMR-SSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRER 514
+ L FR +R ++G RP+ L VL+ACS VG++ G Q++ ++++ G +
Sbjct: 148 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS--GFSSSVFC 205
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+ +VD+ A+ G V A + +A D I W S++A + V + A ++D
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTI-CWSSMIA---CYHRVGCYQEALALFSRMD 261
Query: 575 PTNSA----ALVLLCNIYASSGKWEEVARLMGSM 604
SA LV + + ASSG+ + L+ M
Sbjct: 262 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 295
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/581 (29%), Positives = 302/581 (51%), Gaps = 64/581 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T A +S ++ L G ++H + + + + N +++MY KC L+D +F
Sbjct: 248 ATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGL 307
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+ ++V+W MI+GC QNG + A+ L+ M +SG+ PD T S++ A + L G
Sbjct: 308 MPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQG 367
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
++LH +++++ + +AL+ +Y K + A +V+ S D+ +MI G+
Sbjct: 368 KELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGY--- 424
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
V N M + EA+ +F + ++ + P+ + + S+L AC
Sbjct: 425 -----VLNGM--------------------SQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----------------------- 357
S ++ G ++HSY +K + V +A++ A
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWN 519
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E LF M K ++T + V+ ACA++ ++ G ++H ++K
Sbjct: 520 SMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG 579
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
+ D+F + L+DMY KCG+L A +F M + + VSW+S+I Y +G +E++ L
Sbjct: 580 PIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLL 639
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
R M+ G + +HVT + +++AC+H G V+EGL+L+R M EY I P E +C+VDL +R
Sbjct: 640 RHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSR 699
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG++ +A + I M F D +W +LL +C+ H NV++ + A++ + K+DP NS VL+
Sbjct: 700 AGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLM 759
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NI A +G+W+ V+++ MK+ V+K+PG SW+++ H
Sbjct: 760 SNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSH 800
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/568 (27%), Positives = 259/568 (45%), Gaps = 79/568 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +C++L ++ LGR VH + D + + ++ MY G L DAR VFD M
Sbjct: 148 TFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGM 207
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+R+ V W M+ G + G ++A+EL+ M SG P+ T + + + G
Sbjct: 208 AERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGV 267
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH +K S + N L++MY K + D W +F + R D+ +W MI G +
Sbjct: 268 QLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNG 327
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F ++A+ LF +M + PD +T+ SLL A T
Sbjct: 328 F----------------------------VDQALLLFCDMQKSGIRPDSVTLVSLLPALT 359
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNA------------------------------- 350
QG ++H YI++ + +V + +A
Sbjct: 360 DLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGST 419
Query: 351 -----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L + E ++F +L +P+ + V+ ACA+MA++++G +LH Y +K
Sbjct: 420 MISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNA 479
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+V + LMDMY KCG L + +F+ + D V+W+S+I +AQ G EEAL LFR
Sbjct: 480 YEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFR 539
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE---RRSCVVDLL 522
M GV+ ++VT+ VL+AC+ + + G +++ ++ P R S ++D+
Sbjct: 540 EMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG----PIRADLFAESALIDMY 595
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNS 578
+ G + A M ++ V W S++AS +G +V + + E K D
Sbjct: 596 GKCGNLEWAHRVFESMPEKNE-VSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTF 654
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKE 606
ALV C A +G+ +E RL M E
Sbjct: 655 LALVSAC---AHAGQVQEGLRLFRCMTE 679
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 315 SLLCACTSPLSLYQGMQIHS---------------------YIIKKGFYSNVPVCNAILQ 353
++L C SP L G+Q+H Y++ + F V V +++ +
Sbjct: 44 AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103
Query: 354 ---------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+++ LF L S PD TF V+ +CAA+ ++
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G +H GL D+FV + L+ MY G L AR++F+ M + D V W+ ++ GY
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
+ G A++LF MR+SG PN TL L+ + + G+QL+ + +YG+
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLH-TLAVKYGLESEV 282
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ +V + A+ + + M DD+V W +++ C +G VD
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGCVQNGFVD 330
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 195/647 (30%), Positives = 314/647 (48%), Gaps = 75/647 (11%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF--DFLQNN 73
C+ DA L A ++ D R+ W + S C +N EA A D L++
Sbjct: 46 CKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAI--SGCTRNGQPEAAAAMFADMLESG 103
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
A A + +L LG +VH + + DA + + ++ +Y +CGS+
Sbjct: 104 VAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWA 163
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A VF M +VV +T++++ +NG A+E+ QM++ GL P++ T S++ C
Sbjct: 164 AEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPR 223
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+ +G Q+H +++K + + ALI Y+++
Sbjct: 224 M----IGEQIHGYMLKVMGSQSVYASTALIDFYSRY------------------------ 255
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
D A TVF ++S N+ SW +++ +A+ +FSEM + P+
Sbjct: 256 ----GDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAF 311
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------- 352
L AC S + G QIH IK +++ V NA+L
Sbjct: 312 SIALGACGS---VCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIEN 368
Query: 353 ------------QHQAGELFRLFSLMLASQTK---PDHITFNDVMGACAAMASLEMGTQL 397
Q G + +L+L ++ P+ F+ + +CA +A L+ G QL
Sbjct: 369 PDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQL 428
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
HC +K G V N L++MY KCG +GSAR F+ M DV+SW+SLI G AQ G
Sbjct: 429 HCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAA 488
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
L+ F M SSG +P+ T + VL C+H GLV+EG +R+M + YG+ PT +C
Sbjct: 489 NLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYAC 548
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++D+L R GR EA I M F+ D+++WK+LLASCK H N+D+GK A + ++++ +
Sbjct: 549 MIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERD 608
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
SA+ VL+ N+YA +W++ R+ M E GV+K G SWIE++ ++
Sbjct: 609 SASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEV 655
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 244/541 (45%), Gaps = 87/541 (16%)
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
L + PD VL L+ K G L DA +FD MP++NVV+WT I+GC++NGQ AA
Sbjct: 34 LGAPPPPDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAA 93
Query: 167 ELYVQMLQSGLMPDQF--TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
++ ML+SG+ + F A +G + LG Q+H+ +++ + + LI
Sbjct: 94 AMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIE 153
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
+Y++ GSM A VF ME+P++ + ++++
Sbjct: 154 LYSRC---------------------GSMW-------AAEEVFRRMEAPDVVGYTSLVSA 185
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK----- 339
+ + A+ + +M + L P+ T+ S+L C + G QIH Y++K
Sbjct: 186 LCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMI----GEQIHGYMLKVMGSQS 241
Query: 340 --------GFYSN-------------------VPVCN----AILQHQAGELFRLFSLMLA 368
FYS V C+ I + + R+FS M++
Sbjct: 242 VYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMIS 301
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+P+ F+ +GAC S+ +G Q+HC +K L D+ V N L+ MY + G +
Sbjct: 302 EAVEPNEFAFSIALGAC---GSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSE 358
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
+ +E+PD+VSW++ I Q G E+A+ L +M S G PN L++C+
Sbjct: 359 VEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCAD 418
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD----DDI 544
+ L+++G QL+ + + G + ++++ ++ G++ A ++AFD D+
Sbjct: 419 LALLDQGRQLH-CLALKLGCDFKVCTGNALINMYSKCGQIGSA-----RLAFDVMNLHDV 472
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENIL----KIDPTNSAALVLLCNIYASSGKWEEVARL 600
+ W SL+ HG ++ A + + D + A+++ CN + E RL
Sbjct: 473 MSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRL 532
Query: 601 M 601
M
Sbjct: 533 M 533
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 277/523 (52%), Gaps = 49/523 (9%)
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI---IRACSGLCCVG 198
P +SW I + G AI L+++M ++ P S+ +++C+ L
Sbjct: 10 PWPPPLSWAHQIRMAAAQGHFRDAISLFLRM-RACAAPRSSVPASLPAALKSCAALGLSA 68
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG LHA I+S + + NAL+ +Y K S + +TS G +
Sbjct: 69 LGASLHALAIRSGAFADRFTANALLNLYCKLP--------CSYLHSTGVTSVGG-TGSST 119
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
L+ R VF+EM ++ SWNT++ G A +EA+ L +M PD T+ S+L
Sbjct: 120 ALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLP 179
Query: 319 ACTSPLSLYQGMQIHSYIIKKGF--------------------------YSNVPVCNAIL 352
+ +G ++H + ++ GF + N+PV + IL
Sbjct: 180 IFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPIL 239
Query: 353 QHQ--AG--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+ AG E +F ML + +P +TF+ ++ C +ASL G QLH Y++
Sbjct: 240 WNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVI 299
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ G +VF+ + L+DMY KCG + A +F+ M PDVVSW+++I+GYA G EAL
Sbjct: 300 RGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALV 359
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF RM +PNH+T + VLTACSH GLV++G + ++ M + YGI+PT E + + D+L
Sbjct: 360 LFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADIL 419
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + EA +FI++M VW +LL +C+ H N + + A+ I++++P + + V
Sbjct: 420 GRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHV 479
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+L N+Y++SG+W E A L SM+++G++K P SWIE++ K+H
Sbjct: 480 VLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKLH 522
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 55/390 (14%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L+ +V D + R W+ L ++ ++EALV + FR T + ++
Sbjct: 121 LESVRKVFDEMIERDVVSWN-TLVLGCAEEGRHHEALVLVRKMWRE-GFRPDSFTLSSVL 178
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
+ ++ G +VH + + D + + +++MY C + + VFD +P R+ +
Sbjct: 179 PIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPI 238
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
W +++AGC+QNG A+ ++ +MLQ+G+ P TF S+I C L + G+QLHA+V
Sbjct: 239 LWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV 298
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
I+ ++ ++LI MY K I A ++F + D+ SW +MI G++
Sbjct: 299 IRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYA--------- 349
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
+ P A EA+ LF M P+ +T ++L AC+
Sbjct: 350 --LHGP-----------------AREALVLFERMELGNAKPNHITFLAVLTACS------ 384
Query: 328 QGMQIHSYIIKKGF---------YSNVPV---CNAI--LQHQAGELFRLFSLMLASQTKP 373
H+ ++ KG+ Y VP C A+ + +AGEL ++ + Q KP
Sbjct: 385 -----HAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIKP 439
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMK 403
++ ++ AC + + ++ IM+
Sbjct: 440 TASVWSTLLRACRVHKNTMLAEEVAKKIME 469
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/615 (28%), Positives = 326/615 (53%), Gaps = 43/615 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C L ++A +V D L + W+ + + + L EA+ F ++ +
Sbjct: 224 DMYGKCGLCEEAKKVFDKILEKNIVAWN-SMIVNFTQNGLNAEAVETFYEMRVEG---VA 279
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P+ T + +SA ++L + G++ H + S + +L + ++N Y K G +EDA +V
Sbjct: 280 PTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELV 339
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F EM +++ V+W +++G NG + A++L M L D T SI+ A + +
Sbjct: 340 FSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNL 399
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG++ H+ +++ S + +++I MY K +++ A VF + A++D+ W +++ +
Sbjct: 400 KLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAY 459
Query: 258 SKLDFA---RTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
++ + +F +M+ PN+ SWN++I G+ + ++A F EM + P+
Sbjct: 460 AEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNL 519
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
+T +L+C + + G E F F M +
Sbjct: 520 ITWTTLICG----------------LAQNGL--------------GDEAFLTFQSMEEAG 549
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
KP+ ++ + ++ AC+ MASL G +HCYI + L++ V+ L++MY KCGS+ A+
Sbjct: 550 IKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAK 609
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
+F+ + ++ ++++I GYA G EAL LFRR++ ++P+ +T +L+AC H G
Sbjct: 610 RVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAG 669
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
LV EGL+L+ M + + I+ E C+V +L+R+ + EA I M F+ D ++ SL
Sbjct: 670 LVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFEPDAFIFGSL 729
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
LA+C+ H + ++ +R E +LK++P NS V L N YA++G W+E +++ G MKER +
Sbjct: 730 LAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRGLMKERSLS 789
Query: 611 KVPGQSWIEIQTKIH 625
K+PG S I+I K H
Sbjct: 790 KIPGHSLIQIGNKTH 804
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 261/564 (46%), Gaps = 18/564 (3%)
Query: 52 SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS-- 109
SSLCKQ EAL L+ + I P Y +L+ C R+L LG+++H IL +
Sbjct: 51 SSLCKQGHLLEALDLVTDLELE-DITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGE 109
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + ++ Y KC E A +F ++ +N SW A++ S+ G A+ +
Sbjct: 110 SIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGF 169
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M + GL+ D F +A L +G G+ +HA+V+K G + +L+ MY K
Sbjct: 170 REMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKC 229
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVA 286
+A VF I K+I +W SMI F++ A F EM +A ++
Sbjct: 230 GLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFL 289
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT----SPLSLYQGMQ-IHSYIIKKGF 341
S S AN ++ + G + GL + ++L + S + L + + + S +++K
Sbjct: 290 SAS-ANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDT 348
Query: 342 YS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ N+ V + L +M + + D +T +M A A +L++G + H +
Sbjct: 349 VTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSF 408
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++ L DV V + ++DMY KC L AR +F+ D++ W++L+ YA+ G E
Sbjct: 409 CVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGET 468
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
LKLF +M+ G+ PN ++ V+ + G V++ + MQ+ GI P + ++
Sbjct: 469 LKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQS-LGICPNLITWTTLIC 527
Query: 521 LLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PT 576
LA+ G EA M + + SLL++C T ++ G+ I + +
Sbjct: 528 GLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSV 587
Query: 577 NSAALVLLCNIYASSGKWEEVARL 600
++ L L N+YA G + R+
Sbjct: 588 STPVLCSLVNMYAKCGSINQAKRV 611
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 241/507 (47%), Gaps = 41/507 (8%)
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
A +LR + G+ VH +++ + +L+MYGKCG E+A+ VFD++ ++N+V+
Sbjct: 190 ASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVA 249
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +MI +QNG A+E + +M G+ P Q T S + A + L + G+Q HA +
Sbjct: 250 WNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAV 309
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
S I ++LI Y+K + DA VFS + KD +W ++ G+ V N
Sbjct: 310 LSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGY--------VHN 361
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ + A+ L M L D +T+ S++ A +L
Sbjct: 362 GL--------------------VDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKL 401
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAA 387
G + HS+ ++ S+V V ++I+ A E + + K D I +N ++ A A
Sbjct: 402 GKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAE 461
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED----PDVVS 443
+L + GL +V N ++ + G + A++ F M+ P++++
Sbjct: 462 QGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLIT 521
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIM 502
W++LI G AQ G G+EA F+ M +G++PN +++ +L+ACS + + G ++ I
Sbjct: 522 WTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYIT 581
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN--- 559
++E + + +V++ A+ G +++A+ + M ++ V+ ++++ HG
Sbjct: 582 RHELSV--STPVLCSLVNMYAKCGSINQAKRVFD-MILKKELPVYNAMISGYALHGQAVE 638
Query: 560 -VDVGKRAAENILKIDPTNSAALVLLC 585
+ + +R E +K D +++ C
Sbjct: 639 ALSLFRRLKEECIKPDEITFTSILSAC 665
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 281/517 (54%), Gaps = 47/517 (9%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
P+ V +L+ + G + +AR +F+EMP +N+VSW AMI + Q + A +L+++M
Sbjct: 231 PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEM 290
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA-HVIKSEHGSHLISQNALIAMYTKFDR 231
+ D ++ ++I V +G+ L A ++ ++ +Q A+I Y + R
Sbjct: 291 PEK----DSVSWTAMINGY-----VRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGR 341
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ +A +FS I+ +D W SMI G++ + D A +F EM ++ SWNT+IA A
Sbjct: 342 MDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQA 401
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
++A+ +F+EM +R ++ S SL G ++ G Y C
Sbjct: 402 GQMDKALEMFNEMQERNVV--------------SWNSLITG------YVQNGLYFEALNC 441
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
IL Q GE KPD T + A A +A+L +G QLH +KTG
Sbjct: 442 -FILMKQQGE-------------KPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGN 487
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+FV N ++ MY K G + A +F ++ DVVSW+SLI GYA GCG+EA++LF M
Sbjct: 488 DLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMP 547
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G+ P+ VT G+L+AC+H G V++GL L++ M Y I P E +CV++LL R GR+
Sbjct: 548 LRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRL 607
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA + + M +W +LL +C+ H N+++ K +AE +L ++P N++ VLL N++
Sbjct: 608 EEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMH 667
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A +G+W+ V R+ MKE K PG SWIEI ++H
Sbjct: 668 AEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLH 704
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 243/539 (45%), Gaps = 78/539 (14%)
Query: 92 SLRSLQLGR--KVHDHI--LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
+LR QLGR ++ + + + + V +N +++ Y K G + +AR +FD MPQRN+V
Sbjct: 19 NLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLV 78
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSG-----LMPDQFT-FGSIIRA----------- 190
SW +MIAG N A L+ +M + LM +T G + +A
Sbjct: 79 SWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQ 138
Query: 191 ---CSGLCCVGLGRQLHAHVIKSEHGSHL----ISQNALIAMYTKFDRILDAWNVFSSIA 243
C G ++ K L +S N++++ YTK ++ F ++
Sbjct: 139 DTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMG 198
Query: 244 RKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+++ SW M+DG+ LD A F ++ +PN+ SW T+++G A EA +LF+E
Sbjct: 199 ERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNE 258
Query: 301 MGDRELI---------------------------PDGLTVRSLLCACTSPLSLYQGMQIH 333
M + L+ D ++ +++ L Q +I
Sbjct: 259 MPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREIL 318
Query: 334 SYIIKKGFYSNVPVCNAILQH----QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+ + K + + N LQ +A E+F S+ D + +N ++ A
Sbjct: 319 NLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISV-------RDSVCWNSMITGYAHCG 371
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+ +L + + D+ N ++ Y + G + A E+FN M++ +VVSW+SLI
Sbjct: 372 RTDEALRL----FQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLIT 427
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
GY Q G EAL F M+ G +P+ T+V L A +++ + G+QL+ + + G
Sbjct: 428 GYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTI-KTGFG 486
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
++ ++ + A++GRV EAE+ ++ D+V W SL+A +G GK A E
Sbjct: 487 NDLFVKNAILTMYAKSGRVPEAENVFAEIK-XKDVVSWNSLIAGYALNG---CGKEAVE 541
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 193/427 (45%), Gaps = 45/427 (10%)
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVF 267
E GS++ +QN I+ + RI +A VF + ++I ++ SMI ++K + AR +F
Sbjct: 10 EKGSYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELF 69
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL-SL 326
+ M NL SWN++IAG +A LF M R++ +L+ C + + L
Sbjct: 70 DLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYS-----WTLMITCYTRIGEL 124
Query: 327 YQGMQIHSYIIKKGFYSNVPVC-NAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGA 384
+ ++ + + K VC NA++ A + LFR + + +++N ++
Sbjct: 125 EKARELFNLLPDK----QDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSG 180
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
+++G Q + + +V N ++D YV G L SA F + P+VVSW
Sbjct: 181 YTKNGKMQLGLQFFEAMGER----NVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSW 236
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSG-----------VRPNHVTLVGVL-------TAC 486
+++ G+A +G EA LF M + VR N + L +
Sbjct: 237 VTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSV 296
Query: 487 SHVGLVEEGLQLYRIMQNE--YGIIPTRE--RRSCVVDLLARAGRVHEAEDFINQMAFDD 542
S ++ +++ +++Q ++P + ++ +++ ++GR+ EA + +Q++ D
Sbjct: 297 SWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRD 356
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
V W S++ G D R + ++ D + ++ YA +G+ ++ +
Sbjct: 357 S-VCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIA---AYAQAGQMDKALEMFN 412
Query: 603 SMKERGV 609
M+ER V
Sbjct: 413 EMQERNV 419
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/616 (28%), Positives = 305/616 (49%), Gaps = 67/616 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y+ + C+ + + LG ++H ++ D L ++N YG+C LE A VF EM
Sbjct: 676 VYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM 735
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P + W I Q+ + +EL+ +M S L + T +++AC + + +
Sbjct: 736 PNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAK 795
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +V + S + N LI+MY+K ++ A VF S+ ++ +SW SMI ++ L
Sbjct: 796 QIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALG 855
Query: 262 F---ARTVFNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
F A ++F E+ES P++ +WN +++G E +++ M P+ ++
Sbjct: 856 FLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMT 915
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------ 360
S+L A + L G + H Y+++ GF +V V +++ A +F
Sbjct: 916 SVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNR 975
Query: 361 ----------------------RLFSLMLASQTKPDHITFNDVMG--------------- 383
RL + M KPD +T+N ++
Sbjct: 976 NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPN 1035
Query: 384 ---------ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
ACA+++ L+ G ++HC ++ G DVFV L+DMY K SL +A ++F
Sbjct: 1036 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 1095
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+++ + SW+ +I+G+A FG G+EA+ +F M+ GV P+ +T +L+AC + GL+ E
Sbjct: 1096 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGE 1155
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G + + M +Y I+P E C+VDLL RAG + EA D I+ M D +W +LL SC
Sbjct: 1156 GWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 1215
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H N+ + AA+N+ K++P NSA +L+ N+Y+ +WE++ L M GVR
Sbjct: 1216 RIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQV 1275
Query: 615 QSWIEIQTKIHASGND 630
SWI+I ++H +D
Sbjct: 1276 WSWIQINQRVHVFSSD 1291
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 189/456 (41%), Gaps = 101/456 (22%)
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC-SQNGQENAA 165
L K PDA N +++ Y G A MVF RN + W + + S G +
Sbjct: 600 LPQKWNPDAAAKN-LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIV 658
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+E++ ++ G++ D + ++ C+ + + LG ++H +IK + + AL+
Sbjct: 659 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 718
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
Y + WG L+ A VF+EM +P WN I
Sbjct: 719 YGR--------------------CWG--------LEKANQVFHEMPNPEALLWNEAIILN 750
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
+ + LF +M L + T+ +L AC +L QIH Y+ + G S+V
Sbjct: 751 LQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDV 810
Query: 346 PVCNAILQ--HQAGEL----------------------------------FRLFSLMLAS 369
+CN ++ + G+L + LF + +S
Sbjct: 811 SLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESS 870
Query: 370 QTKPDHITFN-----------------------------------DVMGACAAMASLEMG 394
KPD +T+N V+ A + + L MG
Sbjct: 871 DMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMG 930
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+ H Y+++ G DV+V L+DMYVK SL SA+ +F+ M++ ++ +W+SL+ GY+
Sbjct: 931 KETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFK 990
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
G E+AL+L +M G++P+ VT G+++ + G
Sbjct: 991 GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 174/395 (44%), Gaps = 44/395 (11%)
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA-NEAMSLFSEMGDRELIPDGLTVR 314
GF A VF N WN+ + S + + + + +F E+ + ++ D
Sbjct: 619 GFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYS 678
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGF--------------------------YSNVPVC 348
L CT + ++ GM+IH +IK+GF + +P
Sbjct: 679 VALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNP 738
Query: 349 NAILQHQAGEL----------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
A+L ++A L LF M S K + T V+ AC M +L Q+H
Sbjct: 739 EALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIH 798
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
Y+ + GL DV + N L+ MY K G L AR +F+ ME+ + SW+S+I YA G
Sbjct: 799 GYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLN 858
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+A LF + SS ++P+ VT +L+ G EE L + + MQ E G P + V
Sbjct: 859 DAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSV 917
Query: 519 VDLLARAGRVH---EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+ ++ G ++ E ++ + FD D+ V SL+ + ++ + +N +
Sbjct: 918 LQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN---MKN 974
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
N A L + Y+ G +E+ RL+ M++ G++
Sbjct: 975 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 1009
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 170/404 (42%), Gaps = 61/404 (15%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
Y E ++ F+ S+ ++ A S L L +G++ H ++L + D +
Sbjct: 891 YKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGT 950
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+++MY K SL A+ VFD M RN+ +W ++++G S G A+ L QM + G+ P
Sbjct: 951 SLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP 1010
Query: 180 DQFTFGSII------------------------RACSGLCCVGLGRQLHAHVIKSEHGSH 215
D T+ +I RAC+ L + G+++H I++
Sbjct: 1011 DLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIED 1070
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ ALI MY+K + +A VF I K + SW MI GF+
Sbjct: 1071 VFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFA----------------- 1113
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
I G+ EA+S+F+EM + PD +T +LL AC + + +G +
Sbjct: 1114 ------IFGL-----GKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDS 1162
Query: 336 IIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
+I Y VP C L +AG L + L+ KPD + ++G+C +
Sbjct: 1163 MITD--YRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKN 1220
Query: 391 LEMGTQL--HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
L + + ++ + + +M L ++ + + REL
Sbjct: 1221 LXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLREL 1264
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 306/590 (51%), Gaps = 52/590 (8%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L + L K+ + A D LQ + ++ +I +C+ L +L GR++H +
Sbjct: 6 LSTLLSKRQQLGQIAAAIDALQKRKDADLKECVR--VIQSCARLGALAEGRRIHQLMRRV 63
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
D + NH++ MYGKCGSLE+AR+VF+ P +NV SWT +I C+Q+G+ A+ L+
Sbjct: 64 GLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALF 123
Query: 170 VQMLQSGLMPDQFTFGSIIRACS-GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ML+ G+ P +F + I ACS G + GR LHA + + +++ +L++MY+K
Sbjct: 124 YEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSK 183
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ ++ F S M PN SWN +IA A
Sbjct: 184 CGSLEESMRTFES----------------------------MTEPNAVSWNAMIAAFAEH 215
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY---QGMQIHSYIIKKGFYSNV 345
EA+ +M +G+ S + T+ +++Y G+ + K N+
Sbjct: 216 RRGLEALRTLQKM-----FLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNI 270
Query: 346 PVCN----AILQH----QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
N A +QH +A ELFR ML + D +TF +++GAC +LE G +
Sbjct: 271 ITWNVLISAYVQHCCFKEAMELFRR---MLLLGLEMDEVTFINILGACCVPVALEDGRAI 327
Query: 398 HCYIMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
H + + LA + + N +++MY KCGSL A +F M PDV++W+++I Y Q G
Sbjct: 328 HACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGH 387
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTA-CSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EAL+ + M+ GV P+ T V V+ A C++ GL EE + MQ ++G+ P
Sbjct: 388 TSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHY 447
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C+V+ L +AGR+ +AE I M F+ D++ W S LA+C++HG++ GK AA+ ++IDP
Sbjct: 448 GCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDP 507
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
S V L I+A +G ++E +R+ M +RG+RK G+S I++ T ++
Sbjct: 508 EASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVY 557
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/602 (29%), Positives = 307/602 (50%), Gaps = 69/602 (11%)
Query: 64 LVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
L+ + ++ N + P +T ++ C+ R + LG+ VH + + + VL+N +
Sbjct: 24 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 83
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG--LMP 179
++MY KCG + +A+M+F +NVVSW M+ G S G + ++ QML G +
Sbjct: 84 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 143
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D+ T + + C + ++LH + +K E + + NA +A Y K
Sbjct: 144 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC---------- 193
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
L +A+ VF+ + S + SWN +I G A ++ ++
Sbjct: 194 ------------------GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 235
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAG 357
+M L+PD TV SLL AC+ SL G ++H +II+ ++ V ++L G
Sbjct: 236 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295
Query: 358 ELFRLFSLMLASQTK-----------------PDH-----------------ITFNDVMG 383
EL + +L A + K PD I+ V G
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
AC+ + SL +G + H Y +K L D F+ L+DMY K GS+ + ++FN +++ S
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+++I+GY G +EA+KLF M+ +G P+ +T +GVLTAC+H GL+ EGL+ M+
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 475
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFI-NQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ +G+ P + +CV+D+L RAG++ +A + +M+ + D+ +WKSLL+SC+ H N+++
Sbjct: 476 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 535
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
G++ A + +++P VLL N+YA GKWE+V ++ M E +RK G SWIE+
Sbjct: 536 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 595
Query: 623 KI 624
K+
Sbjct: 596 KV 597
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 292/554 (52%), Gaps = 74/554 (13%)
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
++L +L Y + G AR +FDEMP+R+VV+WT MI+G + + A ++V M++
Sbjct: 44 SILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVK 103
Query: 175 SGL-MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS-QNALIAMYTKFDRI 232
+G P+ FT S+++AC G+ V GR +H IK I NAL+ MY
Sbjct: 104 NGNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYAS---- 159
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+ +D A VF++++ N+ SW T+IAG N N
Sbjct: 160 -------CGVGMRD----------------ACVVFHDIKEKNVVSWTTLIAGYTHRGNGN 196
Query: 293 EAMSLFSEMGDRELIPDGL-----TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
A+ +F RE++ DG+ ++ + AC S S G QIH+ +IK GF S++PV
Sbjct: 197 RALQIF-----REMLLDGVALNPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPV 251
Query: 348 CNAIL-----------------------------------QHQAGELFRLFSLMLASQTK 372
N+IL + + E F +FS M +
Sbjct: 252 TNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYERSDSIEPFFIFSQMESEGFS 311
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ TF ++ ACA A+L+ G Q+H I + GL ++ + N L+DMY KCG++ +++
Sbjct: 312 PNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKN 371
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ M ++VSW+S+++GY G G+EA++LF M SG+RP+ V + VL ACSH GLV
Sbjct: 372 FSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLV 431
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
++GL+ M N+Y I P +E CVVDLL R GRV +A I M F D VW +LL
Sbjct: 432 DQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLG 491
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
+CK H +GK AA+ L + P V+L NIYA+ GKW E AR+ MK G RKV
Sbjct: 492 ACKAHNFSRLGKLAAKKALALRPNMVETYVMLSNIYAAEGKWGEAARMRKLMKRAGCRKV 551
Query: 613 PGQSWIEIQTKIHA 626
G+SWIE++ ++++
Sbjct: 552 AGRSWIEVRNQVYS 565
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 197/464 (42%), Gaps = 74/464 (15%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
L QA + D R W + S N Y +A F + N N T + +
Sbjct: 59 LTSQARNLFDEMPERDVVAWT-TMISGYTHCNEYTQAWSVFVDMVKNGNDPPNAFTISSV 117
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCG-SLEDARMVFDEMPQR 144
+ AC ++ + GR VH + + + + N +++MY CG + DA +VF ++ ++
Sbjct: 118 LKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDACVVFHDIKEK 177
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NVVSWT +IAG + G N A++++ +ML G+ + + +RAC+ + GRQ+H
Sbjct: 178 NVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACASIGSQNFGRQIH 237
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
VIK S L N+++ MY + + +A F+ + KD+ +W ++I G+ + D
Sbjct: 238 TAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYERSDSIE 297
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
F +FS+M P+ T SL+ AC +
Sbjct: 298 PFF-----------------------------IFSQMESEGFSPNCFTFTSLVAACANAA 328
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------------- 353
+L G Q+H I ++G N+ + NA++
Sbjct: 329 ALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMI 388
Query: 354 ----HQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLA 407
H G E LF M+ S +PD + F V+ AC+ ++ G + ++C I +
Sbjct: 389 GYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIK 448
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFN---FMEDPDVVSWSSLI 448
+ + ++D+ + G + A +L FM D V W +L+
Sbjct: 449 PNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESV--WGALL 490
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 45/369 (12%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ P + + + AC+S+ S GR++H ++ + D + N IL+MY +CG L +A
Sbjct: 212 LNPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKY 271
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIE---LYVQMLQSGLMPDQFTFGSIIRACSGL 194
F++M ++++++W +IAG + + +IE ++ QM G P+ FTF S++ AC+
Sbjct: 272 FNDMTEKDLITWNTLIAGY----ERSDSIEPFFIFSQMESEGFSPNCFTFTSLVAACANA 327
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+Q+H + + +L NALI MY K I+D+ FS ++ ++ SW SM+
Sbjct: 328 AALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMM 387
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
G+ + + EA+ LF EM + PD +
Sbjct: 388 IGYGTHGYGK----------------------------EAVELFDEMVRSGIRPDQVVFM 419
Query: 315 SLLCACTSPLSLYQGMQ-----IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLAS 369
++L AC+ + QG++ I+ Y IK + C L + G + + L+ +
Sbjct: 420 AVLHACSHAGLVDQGLRYINCMINDYHIKPN--QEIYGCVVDLLGRPGRVEDAYQLIRSM 477
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL-DVFVMNGLMDMYVKCGSLGS 428
D + ++GAC A +G + + + +VM L ++Y G G
Sbjct: 478 PFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYVM--LSNIYAAEGKWGE 535
Query: 429 ARELFNFME 437
A + M+
Sbjct: 536 AARMRKLMK 544
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 308/585 (52%), Gaps = 45/585 (7%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+TYA + AC+ R L++G +VH ++ S V+ +L+ Y C L+ AR +FD
Sbjct: 113 ATYASALGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDT 172
Query: 141 M--------------------------------PQRNVVSWTAMIAGCSQNGQEN--AAI 166
+ P R++ +WTA+I+G ++ E ++
Sbjct: 173 LHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSL 232
Query: 167 ELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
EL+VQ+L + G+MP++FT+ S++RAC + + GR +H +I+S S + +AL+ +
Sbjct: 233 ELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDL 292
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTII 282
Y + + DA V++ + + + ++I GF + + A+ VF++M + S+N +I
Sbjct: 293 YCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMI 352
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII--KKG 340
A + +F M R ++ T+ S++ L +G ++ I +
Sbjct: 353 KAYADEGRLEDCRRMFEMMPRRNMV----TLNSMMSVLLQNGKLEEGRKLFEQIKDERNT 408
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
N + + Q+ E +LF++M + TF ++ ACA + ++E G +H
Sbjct: 409 VTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHAL 468
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ KT + +V L+DMY KCG + AR F+ + P+V SW+SLI G AQ G EA
Sbjct: 469 LCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEA 528
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
+ F RM + V+PN +T +G+L A + GLV +G++ + M++ YG++PT E +C VD
Sbjct: 529 IVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMES-YGVVPTVEHYTCAVD 587
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL RA RV EAE FI++M D VVW +LL +C ++++G++ AE + + + +A
Sbjct: 588 LLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISA 647
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
V + NIYA GKWE+V ++ ++ +K PG SWIE++ +H
Sbjct: 648 YVAMSNIYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKDMVH 692
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 213/470 (45%), Gaps = 54/470 (11%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
AR VFD M +R +SW A +A ++ G+ A+ +M +S D+ T+ S + AC+
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACAR 124
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
C+ +G Q+H V+KS + +L+ Y+ + A +F ++ + W M
Sbjct: 125 GRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPM 184
Query: 254 IDGFSKLDFARTVFNEME----SPNLASWNTIIAGVASCSNAN--EAMSLFSE-MGDREL 306
+ + + + ++ S +L +W II+G A +N +++ LF + + + +
Sbjct: 185 VVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGV 244
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV--------------PVCNAIL 352
+P+ T S+L AC +L G IH +I+ GF S V +A++
Sbjct: 245 MPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVM 304
Query: 353 QHQAGELFRLFS------------------LMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ ++ L + L+ + T+ D ++N ++ A A LE
Sbjct: 305 VYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDC 364
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQ 453
++ + + ++ +N +M + ++ G L R+LF ++D + V+W+S+I GY Q
Sbjct: 365 RRMFEMMPRR----NMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQ 420
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM----QNEYGII 509
EALKLF M + + T +L AC+ +G +E+G ++ ++ G +
Sbjct: 421 NDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYV 480
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
T +VD+ ++ G V +A + + ++ W SL+ +G+
Sbjct: 481 GT-----ALVDMYSKCGCVSDARAAFSCI-MSPNVASWTSLINGLAQNGH 524
>gi|302801049|ref|XP_002982281.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
gi|300149873|gb|EFJ16526.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
Length = 515
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 275/521 (52%), Gaps = 44/521 (8%)
Query: 80 PSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T A ++ AC SL L+ G+ VH H++ S + D V + ++NMY KCG++ +AR V
Sbjct: 2 PKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGIS-LVNMYAKCGTVGEARKV 60
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F+ + R+ + W +MI Q + A+ L+ +M G+ PD+ TF +++ AC +
Sbjct: 61 FERINNRSRILWNSMITA-YQERDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADL 119
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
GR +H ++ S + + AL MY K + +A VF S+ +D+ SW
Sbjct: 120 ENGRTIHRRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSW------- 172
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
N +IA + A+SL M + PD T SLL
Sbjct: 173 ---------------------NNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFASLL 211
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSN----------VPVCNAILQH-QAGELFRLFSLM 366
AC+ P L G QIHS I F ++ + A QH + + L+ M
Sbjct: 212 NACSDPNRLVDGRQIHSEIFDNIFSNSQQHHRDLFLWTSMITAYEQHGEYRKALELYEQM 271
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+ Q + D +TF V+ ACA ++ L G +H +M+ GLA DV V N ++ MY KCGS
Sbjct: 272 HSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSF 331
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A +F + D+ W++LI YA+ G GE+AL +FRR+R G+ +++T V +L+AC
Sbjct: 332 DEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSAC 391
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SHVGL+EEG + + M E GI P E SC+VDLLARAG +H AE+F+++M + +V
Sbjct: 392 SHVGLIEEGCEFFASMA-ELGIEPNMEHYSCLVDLLARAGHLHTAEEFLSRMPVAANTIV 450
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+LLA+C+ HG+V+ +R AE + +DP + A V L NI
Sbjct: 451 LTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 491
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 147/346 (42%), Gaps = 43/346 (12%)
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV--------------------- 345
+P L + +L AC S L G +H+++I+ G ++
Sbjct: 1 MPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGISLVNMYAKCGTVGEARKV 60
Query: 346 -------------PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ A + E LF M PD ITF V+ AC A LE
Sbjct: 61 FERINNRSRILWNSMITAYQERDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLE 120
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G +H I+ +G A DV V L +MY KCGSLG AR +F+ M DVVSW+++I Y
Sbjct: 121 NGRTIHRRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYV 180
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPT 511
Q GE A+ L M+ G+RP+ T +L ACS + +G Q++ I N +
Sbjct: 181 QGRDGEGAISLCWAMQLEGMRPDKATFASLLNACSDPNRLVDGRQIHSEIFDNIFSNSQQ 240
Query: 512 RERR----SCVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVGK 564
R + ++ + G +A + QM + D V + S+L +C ++ G+
Sbjct: 241 HHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQ 300
Query: 565 RAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+++ T+ A + +Y G ++E + + K + +
Sbjct: 301 AIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDI 346
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 133/304 (43%), Gaps = 34/304 (11%)
Query: 13 RWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQN 72
R ++ + C L +A V DS + F D+ ++ + Q E ++ +
Sbjct: 139 RVATALFNMYAKCGSLGEARGVFDSMV--FRDVVSWNNMIAAYVQGRDGEGAISLCWAMQ 196
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
R +T+A L++ACS L GR++H I D + N
Sbjct: 197 LEGMRPDKATFASLLNACSDPNRLVDGRQIHSEIF------DNIFSN------------- 237
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+ R++ WT+MI Q+G+ A+ELY QM + D+ TF S++ AC+
Sbjct: 238 ------SQQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACA 291
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L + G+ +HA V++ + + N+++ MY K +A VF KDI+ W +
Sbjct: 292 HLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTA 351
Query: 253 MIDGFSKL---DFARTVFNEMESPNLASWN-TIIAGVASCSNA---NEAMSLFSEMGDRE 305
+I +++ + A +F + + N T +A +++CS+ E F+ M +
Sbjct: 352 LIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELG 411
Query: 306 LIPD 309
+ P+
Sbjct: 412 IEPN 415
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 199/648 (30%), Positives = 313/648 (48%), Gaps = 105/648 (16%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNF--RIRPSTYADLISACS---------------- 91
LF + QNL + L L N +F I PST+A L S S
Sbjct: 4 LFLRIKIQNLSSGVL---KLLPRNPDFFAAINPSTFASLYSTVSGQIEEHPKRYEHHNVA 60
Query: 92 -SLRSLQL---------GRKVHDHILSSKC---QPDAVLHNHILNMYGKCGSLEDARMVF 138
S+ +LQ G+++H ++ P AV ++NMY KCG + A +VF
Sbjct: 61 TSIATLQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAV--TSLVNMYAKCGLMRRAVLVF 118
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+R+V + A+I+G NG A+++Y +M G++PD++TF S+++ +
Sbjct: 119 GG-SERDVFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAMEVSD 177
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
+ +++HA K S +AL+ Y+KF + DA VF + +D
Sbjct: 178 V-KKVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRD------------ 224
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ WN ++ G + +A+ +FS+M + + T+ S+L
Sbjct: 225 ---------------DSVLWNALVNGYSHIFRFEDALIVFSKMREEGVAMSRHTITSVLS 269
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR--------- 361
+ T L G IH +K GF S + V NA++ +A +F
Sbjct: 270 SFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFT 329
Query: 362 -------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
LF ML S +PD +T V+ C +ASL+ G ++H Y++
Sbjct: 330 WNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMI 389
Query: 403 KTGL----ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+GL + + F+ N LMDMYVKCG L AR +F+ M D SW+ +I GY CGE
Sbjct: 390 ASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGE 449
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
AL +F M +GV+P+ +T VG+L ACSH G V EG M+ Y I+PT + +CV
Sbjct: 450 LALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETLYNILPTSDHYACV 509
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
+D+L RA ++ EA D M D+ VVW+S+L+SC+ HGN D+ A + + +++P +
Sbjct: 510 IDMLGRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDLAVVAGKRLYELEPEHC 569
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VL+ N+Y + K+EEV + +MKE+ V+K PG SWI +Q +H
Sbjct: 570 GVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVKKTPGCSWIGLQNGVHT 617
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 33/300 (11%)
Query: 26 MLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYAD 85
M ++ A +V D R D + L + + +AL+ F ++ + T
Sbjct: 208 MSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALIVFSKMREE-GVAMSRHTITS 266
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++S+ + L GR +H + V+ N ++++YGK LE+A +F+ M +R+
Sbjct: 267 VLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMDERD 326
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+ +W +++ G + + L+ ML SG+ PD T +++ C L + GR++H
Sbjct: 327 LFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHG 386
Query: 206 HVIKS----EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++I S S+ N+L+ MY K + DA VF S+ KD SW MI+G+
Sbjct: 387 YMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY---- 442
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
GV SC A+ +FS M + PD +T LL AC+
Sbjct: 443 ----------------------GVQSCGEL--ALDMFSCMCRAGVKPDEITFVGLLQACS 478
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 200/639 (31%), Positives = 316/639 (49%), Gaps = 111/639 (17%)
Query: 99 GRKVHDHILSSKC--QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
GR VH H++ + D N +LNMYGK G L AR +FD MP+RN+VS+ ++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
+Q G AA L+ ++ G +QF ++++ + GL +H+ K H +
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FARTVFNEME-- 271
+ LI Y+ + DA +VF+ I RKD W +M+ +S+ D A VF++M
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257
Query: 272 --SPNLASWNTII------------AGVASCS----NANEA------MSLFSEMGD---- 303
PN + +++ G+ C+ N E + ++++ GD
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317
Query: 304 ---RELIP-------------------------------------DGLTVRSLLCACTSP 323
E+IP + ++ S+L ACT+
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------------ 353
+ L G QIH++ IK G S++ V NA++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437
Query: 354 ---HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
Q+G E +F M A+Q +T++ V+ ACA+ AS+ Q+HC I K+
Sbjct: 438 VGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D + N L+D Y KCG + A ++F + + D++SW+++I GYA G +AL+LF RM
Sbjct: 498 NDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM 557
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
S V N +T V +L+ CS GLV GL L+ M+ ++GI P+ E +C+V LL RAGR
Sbjct: 558 NKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGR 617
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+++A FI + +VW++LL+SC H NV +G+ +AE IL+I+P + VLL N+
Sbjct: 618 LNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNM 677
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
YA++G ++VA L SM+ GVRKVPG SW+EI+ +IHA
Sbjct: 678 YAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHA 716
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 20/335 (5%)
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL--ISQNALIAMYTKFDRILDAWN 237
D F ++ C GR +H HV++ L N L+ MY K + A
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117
Query: 238 VFSSIARKDITSWGSMIDGFSK---LDFARTVFN----EMESPNLASWNTIIAGVASCSN 290
+F + +++ S+ +++ ++ + A +F E N T++ +
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177
Query: 291 ANEAMSLFS---EMGD--RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A A + S ++G + GL LC+ S + + I++K
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS-----DAEHVFNGIVRKDAVVWT 232
Query: 346 PVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ + ++ E FR+FS M S KP+ V+ A + S+ +G +H +KT
Sbjct: 233 AMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT 292
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
+ V L+DMY KCG + AR F + DV+ S +I YAQ E+A +LF
Sbjct: 293 LNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELF 352
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
R+ S V PN +L VL AC+++ ++ G Q++
Sbjct: 353 LRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 296/534 (55%), Gaps = 29/534 (5%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
Q + V N +++ + K G L +AR VFD MP RNVVSWT+M+ G +NG A L+
Sbjct: 83 QRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWH 142
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M ++ G +++ V R+L + + + +++ +I Y + R
Sbjct: 143 MPHKNVVSWTVMLGGLLQEGR----VDDARKLFDMMPEKD----VVAVTNMIGGYCEEGR 194
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ +A +F + ++++ +W +M+ G++ K+D AR +F M N SW ++ G
Sbjct: 195 LDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHS 254
Query: 289 SNANEAMSLFSEMGDRELI--PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
EA SLF M + ++ + + L +++GM+ G +S
Sbjct: 255 GRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERD----NGTWS--- 307
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFN-----DVMGACAAMASLEMGTQLHCYI 401
A+++ + + L +L L + + + + N V+ C ++ASL+ G Q+H +
Sbjct: 308 ---AMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQL 364
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+++ D++V + L+ MYVKCG+L A+++FN DVV W+S+I GY+Q G GEEAL
Sbjct: 365 VRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEAL 424
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+F M SSGV P+ VT +GVL+ACS+ G V+EGL+L+ M+ +Y + P E +C+VDL
Sbjct: 425 NVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDL 484
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RA +V+EA + +M + D +VW +LL +C+TH +D+ + A E + +++P N+
Sbjct: 485 LGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPY 544
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGNDISGN 634
VLL N+YA G+W +V L +K R V K+PG SWIE++ K+H +G D G+
Sbjct: 545 VLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGH 598
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 7/261 (2%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C E F L +D+A V R + W + ++ EAL F +Q
Sbjct: 275 CNEMIMGFGLNGEVDKARRVFKGMKERDNGTWS-AMIKVYERKGYELEALGLFRRMQREG 333
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
PS + ++S C SL SL G++VH ++ S+ D + + ++ MY KCG+L A
Sbjct: 334 LALNFPSLIS-VLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRA 392
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+ VF+ P ++VV W +MI G SQ+G A+ ++ M SG+ PD TF ++ ACS
Sbjct: 393 KQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYS 452
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNA-LIAMYTKFDRILDAWNVFSSIA-RKDITSWGS 252
V G +L + I A L+ + + D++ +A + + D WG+
Sbjct: 453 GKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGA 512
Query: 253 MIDG---FSKLDFARTVFNEM 270
++ KLD A ++
Sbjct: 513 LLGACRTHMKLDLAEVAVEKL 533
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 18/256 (7%)
Query: 218 SQNALIAMYTKFDRILDAWNVF--SSIARKDITSWGSMIDGFSKLDFART---VFNEMES 272
S + IA Y + ++ A VF + + + ++SW +M+ + + R +F +M
Sbjct: 24 SSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQ 83
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
N SWN +I+G +EA +F M DR ++ + S++ + + ++
Sbjct: 84 RNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVV----SWTSMVRGYVRNGDVAEAERL 139
Query: 333 HSYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
++ K S + +LQ + + +LF +M + D + +++G L
Sbjct: 140 FWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMM----PEKDVVAVTNMIGGYCEEGRL 195
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+ L + K +V ++ Y + G + AR+LF M + + VSW+++++GY
Sbjct: 196 DEARALFDEMPKR----NVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGY 251
Query: 452 AQFGCGEEALKLFRRM 467
G EA LF M
Sbjct: 252 THSGRMREASSLFDAM 267
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 308/585 (52%), Gaps = 45/585 (7%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+TYA + AC+ R L++G +VH ++ S V+ +L+ Y C L+ AR +FD
Sbjct: 68 ATYASALGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDT 127
Query: 141 M--------------------------------PQRNVVSWTAMIAGCSQNGQEN--AAI 166
+ P R++ +WTA+I+G ++ E ++
Sbjct: 128 LHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSL 187
Query: 167 ELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
EL+VQ+L + G+MP++FT+ S++RAC + + GR +H +I+S S + +AL+ +
Sbjct: 188 ELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDL 247
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTII 282
Y + + DA V++ + + + ++I GF + + A+ VF++M + S+N +I
Sbjct: 248 YCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMI 307
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII--KKG 340
A + +F M R ++ T+ S++ L +G ++ I +
Sbjct: 308 KAYADEGRLEDCRRMFEMMPRRNMV----TLNSMMSVLLQNGKLEEGRKLFEQIKDERNT 363
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
N + + Q+ E +LF++M + TF ++ ACA + ++E G +H
Sbjct: 364 VTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHAL 423
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ KT + +V L+DMY KCG + AR F+ + P+V SW+SLI G AQ G EA
Sbjct: 424 LCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEA 483
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
+ F RM + V+PN +T +G+L A + GLV +G++ + M++ YG++PT E +C VD
Sbjct: 484 IVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMES-YGVVPTVEHYTCAVD 542
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL RA RV EAE FI++M D VVW +LL +C ++++G++ AE + + + +A
Sbjct: 543 LLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISA 602
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
V + NIYA GKWE+V ++ ++ +K PG SWIE++ +H
Sbjct: 603 YVAMSNIYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKDMVH 647
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 205/457 (44%), Gaps = 54/457 (11%)
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW A +A ++ G+ A+ +M +S D+ T+ S + AC+ C+ +G Q+H
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
V+KS + +L+ Y+ + A +F ++ + W M+ + +
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 267 FNEME----SPNLASWNTIIAGVASCSNAN--EAMSLFSE-MGDRELIPDGLTVRSLLCA 319
+ ++ S +L +W II+G A +N +++ LF + + + ++P+ T S+L A
Sbjct: 153 LDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRA 212
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNV--------------PVCNAILQHQAGELFRLFS- 364
C +L G IH +I+ GF S V +A++ + ++ L +
Sbjct: 213 CVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITS 272
Query: 365 -----------------LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
L+ + T+ D ++N ++ A A LE ++ + +
Sbjct: 273 NTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRR--- 329
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRR 466
++ +N +M + ++ G L R+LF ++D + V+W+S+I GY Q EALKLF
Sbjct: 330 -NMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAV 388
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM----QNEYGIIPTRERRSCVVDLL 522
M + + T +L AC+ +G +E+G ++ ++ G + T +VD+
Sbjct: 389 MCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGT-----ALVDMY 443
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
++ G V +A + + ++ W SL+ +G+
Sbjct: 444 SKCGCVSDARAAFSCI-MSPNVASWTSLINGLAQNGH 479
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/640 (29%), Positives = 318/640 (49%), Gaps = 69/640 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--T 82
C L A +V D R W+ + LC + + E + F + I+P T
Sbjct: 185 CGLFGDAMKVFDEMPERDKVSWNTVI--GLCSLHGFYEEALGFFRVMVAAKPGIQPDLVT 242
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEM 141
++ C+ + R VH + L V + N ++++YGKCGS + ++ VFDE+
Sbjct: 243 VVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEI 302
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+RNV+SW A+I S G+ A++++ M+ G+ P+ T S++ L LG
Sbjct: 303 DERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGM 362
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++H +K S + N+LI MY K G S++
Sbjct: 363 EVHGFSLKMAIESDVFISNSLIDMYAK--------------------------SGSSRI- 395
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A T+FN+M N+ SWN +IA A EA+ L +M + P+ +T ++L AC
Sbjct: 396 -ASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACA 454
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------- 353
L G +IH+ II+ G ++ V NA+
Sbjct: 455 RLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVRDEVSYNIL 514
Query: 354 -------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ + E RLFS M +PD ++F V+ ACA +A + G ++H +++
Sbjct: 515 IIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLF 574
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+FV N L+D+Y +CG + A ++F +++ DV SW+++I+GY G + A+ LF
Sbjct: 575 HTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEA 634
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M+ GV + V+ V VL+ACSH GL+E+G + +++M + I PT +C+VDLL RAG
Sbjct: 635 MKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMC-DLNIEPTHTHYACMVDLLGRAG 693
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EA D I ++ D +W +LL +C+ HGN+++G AAE++ ++ P + +LL N
Sbjct: 694 LMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSN 753
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+YA + +W+E ++ MK RG +K PG SW+++ +HA
Sbjct: 754 MYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHA 793
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAIL----------------QHQAG 357
+LL CT +L Q Q+H+Y + GF +V +C +++ QH
Sbjct: 39 NLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVA 98
Query: 358 ---------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+ F ++ M+ + KPD T+ V+ C+ + G +
Sbjct: 99 YSRSAFLWNTLIRANSIAGVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGRE 158
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H K G DVFV N L+ Y CG G A ++F+ M + D VSW+++I + G
Sbjct: 159 VHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGF 218
Query: 457 GEEALKLFRRMRSS--GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPT 511
EEAL FR M ++ G++P+ VT+V VL C+ E + RI+ + G++
Sbjct: 219 YEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAET----EDKVMARIVHCYALKVGLLGG 274
Query: 512 RER-RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + +VD+ + G ++ +++ + +++ W +++ S G
Sbjct: 275 HVKVGNALVDVYGKCGSEKASKKVFDEID-ERNVISWNAIITSFSFRG 321
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 200/639 (31%), Positives = 316/639 (49%), Gaps = 111/639 (17%)
Query: 99 GRKVHDHIL--SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
GR VH H++ + D N +LNMYGK G L AR +FD MP+RN+VS+ ++
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
+Q G AA L+ ++ G +QF ++++ + GL +H+ K H +
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEME-- 271
+ LI Y+ + DA +VF+ I RKD W +M+ +S+ D A VF++M
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257
Query: 272 --SPNLASWNTII------------AGVASCS----NANEA------MSLFSEMGD---- 303
PN + +++ G+ C+ N E + ++++ GD
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317
Query: 304 ---RELIP-------------------------------------DGLTVRSLLCACTSP 323
E+IP + ++ S+L ACT+
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------------ 353
+ L G QIH++ IK G S++ V NA++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437
Query: 354 ---HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
Q+G E +F M A+Q +T++ V+ ACA+ AS+ Q+HC I K+
Sbjct: 438 VGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D + N L+D Y KCG + A ++F + + D++SW+++I GYA G +AL+LF RM
Sbjct: 498 NDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM 557
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
S V N +T V +L+ CS GLV GL L+ M+ ++GI P+ E +C+V LL RAGR
Sbjct: 558 NKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGR 617
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+++A FI + +VW++LL+SC H NV +G+ +AE IL+I+P + VLL N+
Sbjct: 618 LNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNM 677
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
YA++G ++VA L SM+ GVRKVPG SW+EI+ +IHA
Sbjct: 678 YAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHA 716
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 20/335 (5%)
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL--ISQNALIAMYTKFDRILDAWN 237
D F ++ C GR +H HV++ L N L+ MY K + A
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117
Query: 238 VFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
+F + +++ S+ +++ ++ + A +F + ++ + + A +A
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177
Query: 295 MSLFS-------EMGD--RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
L ++G + GL LC+ S + + I++K
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS-----DAEHVFNGIVRKDAVVWT 232
Query: 346 PVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ + ++ E FR+FS M S KP+ V+ A + S+ +G +H +KT
Sbjct: 233 AMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT 292
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
+ V L+DMY KCG + AR F + DV+ S +I YAQ E+A +LF
Sbjct: 293 LNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELF 352
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
R+ S V PN +L VL AC+++ ++ G Q++
Sbjct: 353 LRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 272/523 (52%), Gaps = 52/523 (9%)
Query: 112 QPDA----VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+PDA V +L+ Y + +++AR +FD MP+RNVVSW M+ + G+ AA
Sbjct: 95 RPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACA 154
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
L+ G+ G S N L+A
Sbjct: 155 LF----------------------DGMPVRDAG-----------------SWNILLAALV 175
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAG 284
+ + +A +F + +++ SW +MI G ++ D AR +F+ M N+ SWN +I+G
Sbjct: 176 RSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISG 235
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
A +EA+ LF M +R++ + + + L + ++ + K+ S
Sbjct: 236 YARNLRIDEALDLFMNMPERDVASWNIMITGFI----QNKDLKKAQELFDEMPKRNVVSW 291
Query: 345 VPVCNAILQHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ N LQ E+ ++F+ ML +P+ +TF + A + +A L G Q+H I K
Sbjct: 292 TTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICK 351
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
T D F+ + LM +Y KCG + AR++F+ + DV+SW+ +I YA G G EA+ L
Sbjct: 352 TPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIAL 411
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
+ +M+ + +PN VT VG+L+ACSH GLV+EGL+++ M + I E SC++DL +
Sbjct: 412 YEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCS 471
Query: 524 RAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAGR+ +A+ IN + VW +LL C HGN +G AA N+L+ +P N+
Sbjct: 472 RAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYT 531
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL NIYAS+GKW+E A++ M +RG++K PG SWIE+ K+H
Sbjct: 532 LLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELANKVH 574
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 27/296 (9%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYAD 85
L +A E+ D +R ++ + + C Q NE+ +A IRP+ T+
Sbjct: 273 LKKAQELFDEMPKR--NVVSWTTMMNGCLQG--NESEMALQVFNGMLVDGIRPNQVTFLG 328
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+ A S+L L G++VH I + Q D + + ++ +Y KCG + AR VFD +++
Sbjct: 329 AVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKD 388
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V+SW MIA + +G AI LY +M ++ P+ T+ ++ ACS V G ++
Sbjct: 389 VISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFE 448
Query: 206 HV-------IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS--WGSMIDG 256
++ ++ EH S LI + ++ R+ DA + + + K +S W +++ G
Sbjct: 449 YMAKDKSIAVRDEHYS------CLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGG 502
Query: 257 ------FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
S D A E E N ++ + AS EA + SEM DR L
Sbjct: 503 CNAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGL 558
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 174/499 (34%), Positives = 261/499 (52%), Gaps = 69/499 (13%)
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
+A+ + M + G+ D T+ +I+ C V G+++H H+ + + N LI
Sbjct: 268 SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILI 327
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MY KF+ L+ A+ +F++M N+ SW T+I+
Sbjct: 328 NMYVKFNL----------------------------LEEAQVLFDKMPERNVVSWTTMIS 359
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
++ + AM L + M ++P+ T S+L AC LY Q+HS+I+K G S
Sbjct: 360 AYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACER---LYDLKQLHSWIMKVGLES 416
Query: 344 NVPVCNAIL-----------------------------------QHQAG-ELFRLFSLML 367
+V V +A++ QH G E L+ M
Sbjct: 417 DVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMR 476
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
D T V+ AC +++ LE+G Q H +++K D+ + N L+DMY KCGSL
Sbjct: 477 RVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLE 534
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A+ +FN M DV+SWS++I G AQ G EAL LF M+ G +PNH+T++GVL ACS
Sbjct: 535 DAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACS 594
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLV EG +R M N YGI P RE C++DLL RA ++ + I++M + D+V W
Sbjct: 595 HAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTW 654
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
++LL +C+ NVD+ AA+ ILK+DP ++ A VLL NIYA S +W +VA + +MK+R
Sbjct: 655 RTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKR 714
Query: 608 GVRKVPGQSWIEIQTKIHA 626
G+RK PG SWIE+ +IHA
Sbjct: 715 GIRKEPGCSWIEVNKQIHA 733
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 190/409 (46%), Gaps = 79/409 (19%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY++LI C + +++ G++VH HI S+ P L N ++NMY K LE+A+++FD+M
Sbjct: 287 TYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKM 346
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+RNVVSWT MI+ S + A+ L M + G+MP+ FTF S++RAC L + +
Sbjct: 347 PERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---K 403
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH+ ++K S + ++ALI +Y+K +L+A VF
Sbjct: 404 QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVF---------------------- 441
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
EM + + WN+IIA A S+ +EA+ L+ M D T+ S+L ACT
Sbjct: 442 ------REMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACT 495
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------- 353
S L G Q H +++K F ++ + NA+L
Sbjct: 496 SLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWST 553
Query: 354 -----HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT- 404
Q G E LF M KP+HIT V+ AC+ + G Y ++
Sbjct: 554 MIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG----WYYFRSM 609
Query: 405 ----GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
G+ ++D+ + L +L + M +PDVV+W +L+
Sbjct: 610 NNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLL 658
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 107/191 (56%), Gaps = 15/191 (7%)
Query: 20 DAFELCMLLD---QAGEVVDSFLRRFDD-------IWDFDLFSSLCKQNLYNEALVAFDF 69
D F L+D + GE++++ L+ F + +W+ + ++ + + +EAL +
Sbjct: 417 DVFVRSALIDVYSKMGELLEA-LKVFREMMTGDSVVWN-SIIAAFAQHSDGDEALHLYKS 474
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
++ F ST ++ AC+SL L+LGR+ H H+L K D +L+N +L+MY KCG
Sbjct: 475 MRR-VGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL--KFDQDLILNNALLDMYCKCG 531
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
SLEDA+ +F+ M +++V+SW+ MIAG +QNG A+ L+ M G P+ T ++
Sbjct: 532 SLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLF 591
Query: 190 ACSGLCCVGLG 200
ACS V G
Sbjct: 592 ACSHAGLVNEG 602
>gi|297735121|emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 281/581 (48%), Gaps = 85/581 (14%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
H +S P++ N L K G L +AR +FD+M Q++ +SWT +I+G +
Sbjct: 49 HFISQTDLPES---NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSE 105
Query: 165 AIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A+ L+ M ++SGL D F +AC V G LH + +K+ + + +AL+
Sbjct: 106 ALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALL 165
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MYTK +I + R VF+EM N+ SW II
Sbjct: 166 DMYTKNGKIFEG----------------------------RRVFHEMPMRNVVSWTAIIT 197
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G+ EA+ FSEM + D T L AC +L G +IH+ +KKGF
Sbjct: 198 GLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDV 257
Query: 344 NVPVCN--AILQHQAGEL----------------------------------FRLFSLML 367
+ V N A + ++ G+L + F M
Sbjct: 258 SSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMR 317
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
S P+ TF V+ CA +A +E G QLH I+ GLA + V N +M MY KCG L
Sbjct: 318 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 377
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
S+ +F+ M D+VSWS++I GY+Q G EA +L MR G +P L VL+AC
Sbjct: 378 SSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG 437
Query: 488 HVGLVEEGLQLYRIMQN--------EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
++ ++E G QL+ + + +Y I P++E C++DLL RAGR+ +AE I M
Sbjct: 438 NMAILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMP 497
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
F D VVW +LL +C+ HG+V+ G+R AE IL+++P + + L NIYAS GKW E A
Sbjct: 498 FHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAAD 557
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKI---------HASGNDI 631
+ MK +GV K PG SWI+++ + H G DI
Sbjct: 558 IRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDI 598
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 132/567 (23%), Positives = 228/567 (40%), Gaps = 93/567 (16%)
Query: 43 DDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D+I L S N +EAL+ F ++ + RI P + AC + G +
Sbjct: 86 DEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELL 145
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H + + + + + +L+MY K G + + R VF EMP RNVVSWTA+I G + G
Sbjct: 146 HGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYN 205
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+ + +M +S + D +TF ++AC+ + GR++HA +K N L
Sbjct: 206 KEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTL 265
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
MY K ++ +F ++ +D+ SW ++I ++
Sbjct: 266 ATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQM---------------------- 303
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
G C A+ F M + ++ P+ T +++ C + + G Q+H+ I+ G
Sbjct: 304 -GQEEC-----AVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLA 357
Query: 343 SNVPVCNAILQHQA------------------------------------GELFRLFSLM 366
+++ V N+I+ A E F L S M
Sbjct: 358 ASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWM 417
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL---ALDVFVMNG------LM 417
KP V+ AC MA LE G QLH Y++ GL A+ + ++
Sbjct: 418 RMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYGCMI 477
Query: 418 DMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN- 475
D+ + G L A + M D V WS+L+ G E + R+ + PN
Sbjct: 478 DLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQ--LEPNC 535
Query: 476 ---HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR-----ERRSCVVDLLARAGR 527
H+TL + + G E + ++M+++ G+I + + V +A
Sbjct: 536 AGTHITLANIYAS---KGKWREAADIRKLMKSK-GVIKEPGWSWIKVKDLVFAFVAGDRS 591
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASC 554
+ ED N + D++ ++ LA C
Sbjct: 592 HPQGEDIYNML----DLLASRTELADC 614
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 297/579 (51%), Gaps = 68/579 (11%)
Query: 87 ISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+ AC LR ++ G +H + + D + + ++ MY KCG + +A +F+E+ + +
Sbjct: 48 LKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPD 107
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V+W++M++G +NG A+E + +M S + PD+ T +++ AC+ L LGR +H
Sbjct: 108 IVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVH 167
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
V++ + L N+L+ Y K +A N+F +A KD+ S
Sbjct: 168 GFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVIS--------------- 212
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
W+T+IA A EA+ +F+EM D P+ TV +L AC +
Sbjct: 213 -------------WSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAAN 259
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFS--------------- 364
L QG + H I+KG + V V A++ E + +FS
Sbjct: 260 DLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALIS 319
Query: 365 -----------------LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
++L + T+PD I V+G+C+ + L+ H Y++K G
Sbjct: 320 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFD 379
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+ F+ L+++Y +CGSLG+A ++FN + D V W+SLI GY G G +AL+ F M
Sbjct: 380 SNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHM 439
Query: 468 -RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
RSS V+PN VT + +L+ACSH GL+ EGL+++ +M N+Y + P E + +VDLL R G
Sbjct: 440 VRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVG 499
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ A + +M F + +LL +C+ H N ++ + A+ + +++ ++ +L+ N
Sbjct: 500 ELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSN 559
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+Y G+WE V +L S+K+RG++K +S IEI+ K+H
Sbjct: 560 MYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVH 598
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 147/329 (44%), Gaps = 44/329 (13%)
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
M L WNT++ ++ + + M FS+M E PD T+ L AC + G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 330 MQIHSYIIKK-GFYSNVPVCNAIL------------------------------------ 352
IH ++ K S++ V ++++
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 353 ---QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
+QA E FR + AS PD +T ++ AC +++ +G +H ++M+ G + D
Sbjct: 121 NGSPYQAVEFFR--RMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSND 178
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
+ ++N L++ Y K + A LF M + DV+SWS++I Y Q G EAL++F M
Sbjct: 179 LSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMID 238
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
G PN T++ VL AC+ +E+G + + + + G+ + + +VD+ +
Sbjct: 239 DGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPE 297
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHG 558
EA +++ D+V W +L++ +G
Sbjct: 298 EAYAVFSRIP-KKDVVSWVALISGFTLNG 325
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 121/234 (51%), Gaps = 10/234 (4%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ AC++ L+ GRK H+ + + + + +++MY KC S E+A VF +P+++
Sbjct: 251 VLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKD 310
Query: 146 VVSWTAMIAGCSQNGQENAAIELY-VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
VVSW A+I+G + NG + +IE + + +L++ PD ++ +CS L + H
Sbjct: 311 VVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFH 370
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLD 261
++VIK S+ +L+ +Y++ + +A VF+ IA KD W S+I G+ K
Sbjct: 371 SYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGT 430
Query: 262 FARTVFNEM-----ESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPD 309
A FN M PN ++ +I++ + +E + +F M D L P+
Sbjct: 431 KALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPN 484
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 69 FLQNNTNFRIRPST--YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYG 126
L+NNT RP ++ +CS L L+ H +++ + + ++ +Y
Sbjct: 338 LLENNT----RPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYS 393
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFG 185
+CGSL +A VF+E+ ++ V WT++I G +G+ A+E + M++S + P++ TF
Sbjct: 394 RCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFL 453
Query: 186 SIIRACS--GLCCVGL 199
SI+ ACS GL GL
Sbjct: 454 SILSACSHAGLIHEGL 469
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 180/528 (34%), Positives = 276/528 (52%), Gaps = 65/528 (12%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G + A F E+ + +++ W A+I G +Q +A I +Y+ M S + P+ FTF ++
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+AC G G+G+Q+H K GS++ QN+L++MY KF +I
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQI---------------- 151
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+AR VF+++ + SW +II+G + EA+++F EM + P
Sbjct: 152 ------------SYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 199
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG--------------------------FY 342
D + + S++ A T+ L QG IH + K G F+
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 259
Query: 343 S-----NVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ N+ + NA++ A E +LF M+ + D IT + A A + SLE
Sbjct: 260 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 319
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+ L YI K+ D FV GL+DMY KCGS+ AR +F+ + D DVV WS +I+GY
Sbjct: 320 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 379
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G G+EA+ L+ M+ +GV PN T +G+LTAC + GLV+EG +L+ +M ++GI P
Sbjct: 380 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHH 438
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ SCVVDLL RAG +++A DFI M + VW +LL++CK H V +G+ AAE +
Sbjct: 439 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFI 498
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+DP N+ V L N+YAS+ W VA + M ++G+ K G S IEI
Sbjct: 499 LDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEI 546
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 153/345 (44%), Gaps = 50/345 (14%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F +++A F E+ P++ WN II G + + + ++ +M ++ P+ T +
Sbjct: 47 FGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 106
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------------- 357
L AC G QIH K GF SNV V N+++ A
Sbjct: 107 LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 166
Query: 358 -----------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
E +F M KPD I VM A + L G +H
Sbjct: 167 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 226
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ K GL + ++ L MY K G + AR FN ME P+++ W+++I GYA G GEEA
Sbjct: 227 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 286
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR----- 515
+KLFR M + +R + +T+ + A + VG L+L R + G I E R
Sbjct: 287 IKLFREMITKNIRVDSITMRSAVLASAQVG----SLELARWLD---GYISKSEYRDDTFV 339
Query: 516 -SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++D+ A+ G ++ A +++A D D+V+W ++ HG+
Sbjct: 340 NTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGH 383
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 146/339 (43%), Gaps = 36/339 (10%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHI--LSSKCQPDAVL 117
+ + A + + ++P A +++A +++ L G+ +H + L + +PD V+
Sbjct: 181 DPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVI 240
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ MY K G +E AR F+ M + N++ W AMI+G + NG AI+L+ +M+ +
Sbjct: 241 S--LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNI 298
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
D T S + A + + + L R L ++ KSE+ LI MY K I A
Sbjct: 299 RVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARC 358
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF +A KD+ W MI G+ + EA+ L
Sbjct: 359 VFDRVADKDVVLWSVMIMGY----------------------------GLHGHGQEAICL 390
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--YSNVPVCNAILQHQ 355
++EM + P+ T LL AC + + +G ++ + G + C L +
Sbjct: 391 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGR 450
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
AG L + + +++ KP + ++ AC + +G
Sbjct: 451 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLG 489
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 58 NLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
N Y E + N R+ T + A + + SL+L R + +I S+ + D +
Sbjct: 280 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 339
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ +++MY KCGS+ AR VFD + ++VV W+ MI G +G AI LY +M Q+G+
Sbjct: 340 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 399
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDA 235
P+ TF ++ AC V G +L + +HG H + ++ + + + A
Sbjct: 400 CPNDGTFIGLLTACKNSGLVKEGWELFH--LMPDHGIEPHHQHYSCVVDLLGRAGYLNQA 457
Query: 236 WNVFSSIARKD-ITSWGSMI 254
++ S+ K ++ WG+++
Sbjct: 458 YDFIMSMPIKPGVSVWGALL 477
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q++ ++ +GL F+M ++ + G + A + F + +PD++ W+++I GY Q
Sbjct: 20 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+ ++++ M+ S V PN T + VL AC + G Q++ +YG +
Sbjct: 80 IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHG-QTFKYGFGSNVFVQ 138
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ +V + A+ G++ A +++ D +V W S+++ +G+
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKL-HDRTVVSWTSIISGYVQNGD 181
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 297/586 (50%), Gaps = 54/586 (9%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDARMVFDEMPQ 143
L+ C S+ L +++H H + D + ++ + G + AR VFD +PQ
Sbjct: 13 LLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQ 69
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ W MI G S+ + +Y+ ML S + PD+FTF +++ + + G+ L
Sbjct: 70 PTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVL 129
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILD-AWNVFSSIARKDITSWGSMIDGFSKLD- 261
H +K S+L Q A I M++ R++D A VF ++ +W M+ G++++
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFS-LCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188
Query: 262 --FARTVFNEME----SPN-----------------------------------LASWNT 280
++ +F EME SPN L N
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENV 248
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I A+C +EA S+F M +R++I + S++ + + + I ++
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVI----SWTSIVTGFANIGQIDLARKYFDQIPERD 304
Query: 341 FYSNVPVCNAILQ-HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ S + + L+ ++ E LF M S KPD T ++ ACA + +LE+G +
Sbjct: 305 YVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKT 364
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
YI K + D FV N L+DMY KCG++G A+++F M D +W+++IVG A G GEE
Sbjct: 365 YIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEE 424
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL +F M + + P+ +T +GVL AC+H G+VE+G + M ++GI P C+V
Sbjct: 425 ALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMV 484
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DLL RAGR+ EA + I M + +VW SLL +C+ H NV + + AA+ IL+++P N A
Sbjct: 485 DLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGA 544
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLLCNIYA+ +WE + ++ M ERG++K PG S +E+ ++
Sbjct: 545 VYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVY 590
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 193/414 (46%), Gaps = 43/414 (10%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I+P T+ L+ + +LQ G+ + +H + + + ++M+ C ++ AR
Sbjct: 103 IKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLAR 162
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFD VV+W M++G ++ Q + L+++M + G+ P+ T ++ ACS L
Sbjct: 163 KVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLK 222
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+ ++ ++ +LI +N LI M+ + +A +VF ++ +D+ SW S++
Sbjct: 223 DLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVT 282
Query: 256 GFS---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
GF+ ++D AR F+++ + SW +I G + EA++LF EM + PD T
Sbjct: 283 GFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFT 342
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELFR--- 361
+ S+L AC +L G + +YI K ++ V NA++ +A ++F+
Sbjct: 343 MVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH 402
Query: 362 -------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+FS M+ + PD IT+ V+ AC +E G
Sbjct: 403 HKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQS 462
Query: 397 LHCYI-MKTGLALDVFVMNGLMDMYVKCGSLGSARE-LFNFMEDPDVVSWSSLI 448
+ M+ G+ +V ++D+ + G L A E + N P+ + W SL+
Sbjct: 463 FFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL 516
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 51/329 (15%)
Query: 35 VDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
+D + FD I + D S + N + EAL F +Q +N + T +++
Sbjct: 290 IDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQM-SNVKPDEFTMVSILT 348
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ L +L+LG V +I + + D + N +++MY KCG++ A+ VF EM ++ +
Sbjct: 349 ACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFT 408
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WTAMI G + NG A+ ++ M+++ + PD+ T+ ++ AC+ HA ++
Sbjct: 409 WTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACT-----------HAGMV 457
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFART 265
+ Q+ I+M + + ++T +G M+D +L+ A
Sbjct: 458 EK-------GQSFFISMTMQHG------------IKPNVTHYGCMVDLLGRAGRLEEAHE 498
Query: 266 VFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDR---ELIPDGLTVRSLLCACT 321
V M PN W +++ N +EM + EL P+ V LLC
Sbjct: 499 VIVNMPVKPNSIVWGSLLGACRVHKNVQ-----LAEMAAKQILELEPENGAVYVLLCNIY 553
Query: 322 SPLSLYQGM-QIHSYIIKKGFYSNVPVCN 349
+ ++ + Q+ ++++G P C+
Sbjct: 554 AACKRWENLRQVRKLMMERGI-KKTPGCS 581
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 319/641 (49%), Gaps = 76/641 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+++A V ++ R W+ + ++ + E+L F F T+ + T + L+
Sbjct: 402 VEEASRVFNNMQERDTISWN-SIITASAHNGRFEESLGHF-FWMRRTHPKTDYITISALL 459
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
AC S + L+ GR +H I S + + + N +L+MY + GS EDA +VF MP R+++
Sbjct: 460 PACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLI 519
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +M+A ++G+ + AI L V+ML++ + TF + + AC L + + +HA V
Sbjct: 520 SWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFV 576
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
I +LI N L+ MY KF +D A+ V
Sbjct: 577 IHFAVHHNLIIGNTLVTMYGKF----------------------------GLMDEAQKVC 608
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP-LSL 326
M ++ +WN +I G A + N + F+ M L+ + +T+ +LL C SP L
Sbjct: 609 KIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLL 668
Query: 327 YQGMQIHSYIIKKGFY-------------------------------SNVPVCNAILQHQ 355
GM IH++I+ GF N NAI
Sbjct: 669 KHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSAN 728
Query: 356 AG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
A E + + M D +F+ + + L+ G QLH +I+K G LD
Sbjct: 729 AHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDE 788
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS---WSSLIVGYAQFGCGEEALKLFRRM 467
+V+N MDMY KCG + ++F + P + S W+ LI A+ G +A + F M
Sbjct: 789 YVLNATMDMYGKCGEID---DVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEM 845
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
G++P+HVT V +L+ACSH GLV+EGL + M +E+G+ E C++DLL R+GR
Sbjct: 846 LDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGR 905
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ EAE FI++M + VW+SLLA+CK HGN+++G++AA+ + +++ ++ +A VL N+
Sbjct: 906 LAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNV 965
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
AS+ +W +V + M+ + ++K P SWI+++ K+ G
Sbjct: 966 CASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFG 1006
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 226/496 (45%), Gaps = 23/496 (4%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC 128
F++N++N P L S + +G+ +H + Q + N ++NMY K
Sbjct: 140 FIRNHSN----PQVSRFLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKF 195
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
GS++ A+ VFD+M RN SW MI+G + G + A++ + M ++G+ P + S++
Sbjct: 196 GSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMV 255
Query: 189 RACSGLCCVGLG-RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
AC C+ G RQ+H +V+K S++ +L+ Y + +A +F I +I
Sbjct: 256 TACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNI 315
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPN----LASWNTIIAGVASCSNANEAMSLFSEMGD 303
SW S++ ++ + V N + + NT+ + +C + + +GD
Sbjct: 316 VSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGD 375
Query: 304 RELIPDGLTVRSLLCACT--SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---- 357
+I GL S+ A + S Y ++ S + + N+I+ A
Sbjct: 376 --VIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRF 433
Query: 358 -ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E F M + K D+IT + ++ AC + L+ G LH I K+GL +V V N L
Sbjct: 434 EESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSL 493
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+ MY + GS A +F+ M D++SW+S++ + + G A+ L M + N+
Sbjct: 494 LSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNY 553
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
VT L+AC ++ E L++ + + + +V + + G + EA+
Sbjct: 554 VTFTTALSACYNL----EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCK 609
Query: 537 QMAFDDDIVVWKSLLA 552
M + D+V W +L+
Sbjct: 610 IMP-ERDVVTWNALIG 624
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 242/529 (45%), Gaps = 52/529 (9%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFD 139
+T A +I C +G ++ ++ S +V + N +++M+G S+E+A VF+
Sbjct: 351 NTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFN 410
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M +R+ +SW ++I + NG+ ++ + M ++ D T +++ AC +
Sbjct: 411 NMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKW 470
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI----- 254
GR LH + KS S++ N+L++MY + DA VF ++ +D+ SW SM+
Sbjct: 471 GRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVE 530
Query: 255 DGFSKLDFARTVFNEM-ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
DG K A + EM ++ ++ T +++C N E + + + L +
Sbjct: 531 DG--KYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL-EKLKIVHAFVIHFAVHHNLII 587
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-----LFRLFSLMLA 368
+ L L Q I+ + +V NA++ A + + F+LM
Sbjct: 588 GNTLVTMYGKFGLMDEAQKVCKIMPE---RDVVTWNALIGGHADDKDPNATIQAFNLMRR 644
Query: 369 SQTKPDHITFNDVMGACAAMAS-LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
++IT +++G C + L+ G +H +I+ G LD +V + L+ MY +CG L
Sbjct: 645 EGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLN 704
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++ +F+ + + + +W+++ A +G GEEALK RMR+ GV + + L
Sbjct: 705 TSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIG 764
Query: 488 HVGLVEEGLQLY---------------RIMQNEYG----------IIP---TRERRS--C 517
++ +++EG QL+ + YG I+P R +RS
Sbjct: 765 NLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNI 824
Query: 518 VVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVG 563
++ LAR G +A + ++M D V + SLL++C G VD G
Sbjct: 825 LISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEG 873
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT-QLHCYIMKTGLALDVFVMNGLMDM 419
+ F M + P ++ AC + G Q+H Y++K GL +VFV L+
Sbjct: 234 QFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHF 293
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y GS+ A +LF +E+P++VSW+SL+V YA G +E L ++R +R +G+ T+
Sbjct: 294 YGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTM 353
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
V+ C G G Q+ + + + ++ + V EA N M
Sbjct: 354 ATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQ 413
Query: 540 FDDDIVVWKSLLASCKTHGNVD 561
+ D + W S++ + +G +
Sbjct: 414 -ERDTISWNSIITASAHNGRFE 434
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G LH +K + + F N L++MY K GS+ A+ +F+ M D + SW+++I G+
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
+ G +A++ F M +GV P+ + ++TAC G + EG + + G++
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA-------------------- 552
+ ++ G V EA ++ + +IV W SL+
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLMVCYADNGHTKEVLNIYRHLRH 343
Query: 553 ---------------SCKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYASSGKWE 595
+C G+ +G + +++K +D ++ + L +++ + E
Sbjct: 344 NGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVE 403
Query: 596 EVARLMGSMKER 607
E +R+ +M+ER
Sbjct: 404 EASRVFNNMQER 415
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 180/528 (34%), Positives = 276/528 (52%), Gaps = 65/528 (12%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G + A F E+ + +++ W A+I G +Q +A I +Y+ M S + P+ FTF ++
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+AC G G+G+Q+H K GS++ QN+L++MY KF +I
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQI---------------- 136
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+AR VF+++ + SW +II+G + EA+++F EM + P
Sbjct: 137 ------------SYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG--------------------------FY 342
D + + S++ A T+ L QG IH + K G F+
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 244
Query: 343 S-----NVPVCNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ N+ + NA++ A E +LF M+ + D IT + A A + SLE
Sbjct: 245 NRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 304
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+ L YI K+ D FV GL+DMY KCGS+ AR +F+ + D DVV WS +I+GY
Sbjct: 305 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 364
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G G+EA+ L+ M+ +GV PN T +G+LTAC + GLV+EG +L+ +M ++GI P
Sbjct: 365 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHH 423
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ SCVVDLL RAG +++A DFI M + VW +LL++CK H V +G+ AAE +
Sbjct: 424 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFI 483
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+DP N+ V L N+YAS+ W VA + M ++G+ K G S IEI
Sbjct: 484 LDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEI 531
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 153/345 (44%), Gaps = 50/345 (14%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F +++A F E+ P++ WN II G + + + ++ +M ++ P+ T +
Sbjct: 32 FGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 91
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------------- 357
L AC G QIH K GF SNV V N+++ A
Sbjct: 92 LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 151
Query: 358 -----------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
E +F M KPD I VM A + L G +H
Sbjct: 152 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 211
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ K GL + ++ L MY K G + AR FN ME P+++ W+++I GYA G GEEA
Sbjct: 212 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 271
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR----- 515
+KLFR M + +R + +T+ + A + VG L+L R + G I E R
Sbjct: 272 IKLFREMITKNIRVDSITMRSAVLASAQVG----SLELARWLD---GYISKSEYRDDTFV 324
Query: 516 -SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++D+ A+ G ++ A +++A D D+V+W ++ HG+
Sbjct: 325 NTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGH 368
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 146/339 (43%), Gaps = 36/339 (10%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHI--LSSKCQPDAVL 117
+ + A + + ++P A +++A +++ L G+ +H + L + +PD V+
Sbjct: 166 DPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVI 225
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ MY K G +E AR F+ M + N++ W AMI+G + NG AI+L+ +M+ +
Sbjct: 226 S--LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNI 283
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
D T S + A + + + L R L ++ KSE+ LI MY K I A
Sbjct: 284 RVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARC 343
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF +A KD+ W MI G+ + EA+ L
Sbjct: 344 VFDRVADKDVVLWSVMIMGY----------------------------GLHGHGQEAICL 375
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--YSNVPVCNAILQHQ 355
++EM + P+ T LL AC + + +G ++ + G + C L +
Sbjct: 376 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGR 435
Query: 356 AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
AG L + + +++ KP + ++ AC + +G
Sbjct: 436 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLG 474
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 58 NLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
N Y E + N R+ T + A + + SL+L R + +I S+ + D +
Sbjct: 265 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 324
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ +++MY KCGS+ AR VFD + ++VV W+ MI G +G AI LY +M Q+G+
Sbjct: 325 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 384
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDA 235
P+ TF ++ AC V G +L + +HG H + ++ + + + A
Sbjct: 385 CPNDGTFIGLLTACKNSGLVKEGWELFH--LMPDHGIEPHHQHYSCVVDLLGRAGYLNQA 442
Query: 236 WNVFSSIARKD-ITSWGSMI 254
++ S+ K ++ WG+++
Sbjct: 443 YDFIMSMPIKPGVSVWGALL 462
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q++ ++ +GL F+M ++ + G + A + F + +PD++ W+++I GY Q
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+ ++++ M+ S V PN T + VL AC + G Q++ +YG +
Sbjct: 65 IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHG-QTFKYGFGSNVFVQ 123
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ +V + A+ G++ A +++ D +V W S+++ +G+
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKL-HDRTVVSWTSIISGYVQNGD 166
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 178/563 (31%), Positives = 295/563 (52%), Gaps = 69/563 (12%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L+ G ++HD I S ++ N +++MY +CG L++A VF +MP RNVVSWT+MIA
Sbjct: 265 LRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAA 324
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL---CCVGLGRQLHAHVIKSEH 212
+Q G + +++L+ M+ G+ P++ T+ S++ A + L + GR++H+ + S
Sbjct: 325 VAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGI 384
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
+ I QN+LI MY + + +A VF SI L+ ++TV
Sbjct: 385 DADPIVQNSLINMYARSGLLAEAREVFDSI-----------------LENSKTVV----- 422
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
S+ T+I+ A + +A+ +F EM R + P+ +T ++L AC + L G I
Sbjct: 423 ----SFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWI 478
Query: 333 HSYIIKKGFYSNVPVC-NAILQHQA--GEL------------------------------ 359
H +I+ G S+ P N+++ A G+L
Sbjct: 479 HERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGN 538
Query: 360 ----FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
L+ ML S PD T + ++ ACA + L MG ++H +++ L D N
Sbjct: 539 NRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNA 598
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L MY KCGSL A L+ DV +W+S++ ++Q G AL+L+ M S GVRPN
Sbjct: 599 LAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPN 658
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
VT + VL +CS GLV EG + + + ++YG P+ E C+VD+L RAG++ +AE+ +
Sbjct: 659 EVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELL 718
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK-- 593
+ M F D + W+SLL+SCK H + ++G RAAE +L++DP +++ V L IYA++G+
Sbjct: 719 DSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALSQIYAAAGRNS 778
Query: 594 -WEEVARLMGSMKERGVRKVPGQ 615
+E+ R + ++ V + G+
Sbjct: 779 DIDEIKRELALRRQIEVHRTTGE 801
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 146/571 (25%), Positives = 250/571 (43%), Gaps = 81/571 (14%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
++AL+ D L++ + ++ YA+L+ C + R+L GR+VH HI+S + +A+L
Sbjct: 33 DDALLRLDKLRHRSTSQL--LLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGEL 90
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+ MY +C + A +FD MP R W ++ + +ELY +M P
Sbjct: 91 VFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPS 150
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
F I AC + + GR +H + + + G + Q+AL+ MY + RI
Sbjct: 151 ACGFMWAIVACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRI-------- 201
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
D A F++ A WN I++ +A + A+ LF +
Sbjct: 202 --------------------DLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQ 241
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------- 353
M + + L AC + L G+QIH I + + V V NA++
Sbjct: 242 MEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGK 299
Query: 354 -HQAGELF----------------------------RLFSLMLASQTKPDHITFNDVMGA 384
+A +F +LF M+A P+ T+ V+ A
Sbjct: 300 LDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSA 359
Query: 385 CAAM---ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM--EDP 439
A + A L+ G ++H I +G+ D V N L++MY + G L ARE+F+ +
Sbjct: 360 IAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSK 419
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
VVS++++I YA G +AL++FR M + GV PN +T VL AC +G + G ++
Sbjct: 420 TVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIH 479
Query: 500 RIMQNEYGIIPTRE-RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
M E G+ + + +VD+ A+ G + A M D+V W +++A+ G
Sbjct: 480 ERMI-ESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMK-TKDLVAWTTIIAANVQSG 537
Query: 559 N----VDVGKRAAENILKIDPTNSAALVLLC 585
N +D+ R ++ + D + L++ C
Sbjct: 538 NNRAALDLYDRMLQSGIHPDIATLSTLLVAC 568
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 65 VAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
A D I P +T + L+ AC++L L +G K+H L SK + DA N +
Sbjct: 541 AALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALA 600
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
MY KCGSLE A ++ +V +WT+M+A SQ G + A+ELY +M G+ P++
Sbjct: 601 AMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEV 660
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFS 240
TF ++ +CS V GR+ H I S++GS +++ ++ + + ++ DA +
Sbjct: 661 TFIPVLISCSQAGLVAEGREFF-HSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLD 719
Query: 241 SIA-RKDITSWGSMI 254
S+ D +W S++
Sbjct: 720 SMPFYPDEIAWQSLL 734
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 194/608 (31%), Positives = 316/608 (51%), Gaps = 68/608 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+TYA ++ +C S LG+++H H + S + +L MY + S E+A VFD
Sbjct: 52 TTYASILDSCGSP---ILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDT 108
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP--DQFTFGSIIRACSGLCCVG 198
MP RN+ SWTA++ + G A L+ Q+L G+ D F F +++ C GLC V
Sbjct: 109 MPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVE 168
Query: 199 LGRQLHAHVIKSE-------------HGSHLISQNALIAMYTKFDRILDAWNVFSSI--- 242
LGRQ+H +K + S NA+IA Y + + A +F +
Sbjct: 169 LGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQE 228
Query: 243 -ARKDITSWGSMIDGF---SKLDFARTVFNEMES----PNLASWNTIIAG---VASCSNA 291
+KD SW SMI G+ S D A ++F ++ P+ + +++AG +AS
Sbjct: 229 GVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRG 288
Query: 292 NEAMSL-------------------FSEMGD---RELIPDGLTVRSLLCACTSPLSLY-- 327
EA SL +S+ D ++ DG++ R L + +S Y
Sbjct: 289 KEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDL-PTWNALISGYAR 347
Query: 328 -----QGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHIT 377
+ ++H + + GF NV N I+ Q +LF+ M + +PD T
Sbjct: 348 CNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYT 407
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
++ AC+ +A+++ G Q+H Y ++ G DV + L+DMY KCG + ++N +
Sbjct: 408 VGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMIS 467
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+P++VS ++++ YA G GEE + LFRRM +S VRP+HVT + VL++C H G +E G +
Sbjct: 468 NPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHE 527
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+M Y ++P+ + +C+VDLL+RAG+++EA + I + + D V W +LL C H
Sbjct: 528 CLALMV-AYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIH 586
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
VD+G+ AAE +++++P N V+L N+YAS+GKW + + MK+ G++K PG SW
Sbjct: 587 NEVDLGEIAAEKLIELEPNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSW 646
Query: 618 IEIQTKIH 625
IE + IH
Sbjct: 647 IEDRDGIH 654
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 209/455 (45%), Gaps = 72/455 (15%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHD------------ 104
Q LY V DF + ++ C L +++LGR++H
Sbjct: 139 QLLYEGVRVRLDFF-----------VFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSA 187
Query: 105 -HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV----VSWTAMIAGCSQN 159
+ S + A +N ++ Y + G+L A+ +FD M Q V +SW +MI+G
Sbjct: 188 FEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDG 247
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
+ A L+ +L+ G+ PD FT GS++ C+ + + G++ H+ I S+ I
Sbjct: 248 SLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVG 307
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA---RTVFNEME----S 272
AL+ MY+K I+ A F ++ +D+ +W ++I G+++ + A R + +M
Sbjct: 308 GALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFE 367
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
PN+ +WN IIAG + AM LF+EM L PD TV +L AC+ ++ +G Q+
Sbjct: 368 PNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQV 427
Query: 333 HSYIIKKGFYSNVPVCNAILQ-----------------------------------HQAG 357
H+Y I+ G S+V + A++ H G
Sbjct: 428 HAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHG 487
Query: 358 EL-FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E LF MLAS+ +PDH+TF V+ +C SLE+G + ++ + + +
Sbjct: 488 EEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCM 547
Query: 417 MDMYVKCGSLGSARELF-NFMEDPDVVSWSSLIVG 450
+D+ + G L A EL N + D V+W++L+ G
Sbjct: 548 VDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGG 582
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 205/726 (28%), Positives = 340/726 (46%), Gaps = 117/726 (16%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C + +C D + V D+ + W+ + SS + LY+E L F + + T
Sbjct: 478 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWN-AVISSYSRNELYDEVLETFIEMISTT 536
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+ TY +I AC+ + + +G VH ++ + D + N +++ YG G + DA
Sbjct: 537 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 596
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS----GLMPDQFTFGSIIRA 190
+FD MP+RN+VSW +MI S NG + L +M++ MPD T +++
Sbjct: 597 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 656
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ +GLG+ +H +K L+ NAL+ MY+K I +A +F K++ SW
Sbjct: 657 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 716
Query: 251 GSMIDGFSK----------------------------LDFARTVFNEMESPNLASW---- 278
+M+ GFS L+ F+E P+L
Sbjct: 717 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 776
Query: 279 ------------NTIIAGVASCSNANEAMSLF------------------SEMGDRELIP 308
N +A A C + + A +F ++ D L
Sbjct: 777 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSL 836
Query: 309 DG-------------LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH- 354
D TV SLL AC+ SL G ++H +II+ ++ V ++L
Sbjct: 837 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 896
Query: 355 -QAGELFRLFSLMLASQTK-----------------PDH-----------------ITFN 379
GEL + +L A + K PD I+
Sbjct: 897 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 956
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V GAC+ + SL +G + H Y +K L D F+ L+DMY K GS+ + ++FN +++
Sbjct: 957 PVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 1016
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
SW+++I+GY G +EA+KLF M+ +G P+ +T +GVLTAC+H GL+ EGL+
Sbjct: 1017 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 1076
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI-NQMAFDDDIVVWKSLLASCKTHG 558
M++ +G+ P + +CV+D+L RAG++ +A + +M+ + D+ +WKSLL+SC+ H
Sbjct: 1077 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 1136
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N+++G++ A + +++P VLL N+YA GKWE+V ++ M E +RK G SWI
Sbjct: 1137 NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 1196
Query: 619 EIQTKI 624
E+ K+
Sbjct: 1197 ELNRKV 1202
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 229/520 (44%), Gaps = 74/520 (14%)
Query: 86 LISACSSLRSLQLGRKVHDHIL-SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
L+ A + +++GRK+H + S++ + D VL I+ MY CGS +D+R VFD + +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQL 203
N+ W A+I+ S+N + +E +++M+ + L+PD FT+ +I+AC+G+ VG+G +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H V+K+ + NAL++ Y + DA +F + +++ SW SMI FS F+
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
F ++ G + E GD +PD T+ ++L C
Sbjct: 625 EESF-------------LLLG-----------EMMEENGDGAFMPDVATLVTVLPVCARE 660
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------- 352
+ G +H + +K + + NA++
Sbjct: 661 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 720
Query: 353 -----QHQAGELFRLFSLMLA--SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ F + MLA K D +T + + C + L +LHCY +K
Sbjct: 721 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 780
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ V N + Y KCGSL A+ +F+ + V SW++LI G+AQ +L
Sbjct: 781 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 840
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ SG+ P+ T+ +L+ACS + + G +++ II R V L +
Sbjct: 841 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF------IIRNWLERDLFVYLSVLS 894
Query: 526 GRVHEAEDFINQMAF----DDDIVVWKSLLASCKTHGNVD 561
+H E Q F D +V W +++ +G D
Sbjct: 895 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 934
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 307/568 (54%), Gaps = 53/568 (9%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P N +L Y K ++ A +FD MP+R+VVSW M++ SQ+G+ A+++ V
Sbjct: 201 EPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ D T+ S + AC+ L + G+QLHA VI++ +AL+ +Y K
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGC 320
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTV--FNEMESP-------NLASW--- 278
+A VF+S+ ++ +W +I GF + F +V FN+M + LA+
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 279 -----------------------------NTIIAGVASCSNANEAMSLFSEMGDRELI-- 307
N++I+ A C N A S+F M +++++
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSW 440
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLM 366
+T S + + GM + I + A +QH A E R++++M
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNVITWNA------MLGAYIQHGAEEDGLRMYNVM 494
Query: 367 LASQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
L+ + +PD +T+ + CA + + ++G Q+ +K GL LD V N ++ MY KCG
Sbjct: 495 LSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGR 554
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ AR++F+F+ D+VSW+++I GY+Q G G++A+++F + G +P++++ V VL+
Sbjct: 555 ILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 614
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
CSH GLV+EG + +M+ + I P E SC+VDLL RAG + EA+D I++M
Sbjct: 615 CSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAE 674
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
VW +LL++CK HGN ++ + AA+++ ++D +S + +L+ IYA +GK ++ A++ M+
Sbjct: 675 VWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMR 734
Query: 606 ERGVRKVPGQSWIEIQTKIHA-SGNDIS 632
++G++K PG SW+E+ K+H +D+S
Sbjct: 735 DKGIKKNPGYSWMEVNNKVHVFKADDVS 762
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 243/546 (44%), Gaps = 88/546 (16%)
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+L+ P+ + HN +LN Y K G L DA +F MP R+V SW +++G Q+ Q A+
Sbjct: 62 LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLAS 121
Query: 166 IELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
+E +V M +SG P+ FTF +++C L L QL V K AL+
Sbjct: 122 LESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVD 181
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTI 281
M+ + + A +F I I SM+ G+ K +D A +F+ M ++ SWN +
Sbjct: 182 MFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMM 241
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK--- 338
++ ++ EA+ + +M + + D T S L AC SL G Q+H+ +I+
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301
Query: 339 -----------------------KGFYSNVPVCNAI---------LQHQA-GELFRLFSL 365
KG ++++ N + LQH E LF+
Sbjct: 302 CIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQ 361
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
M A D ++ C + L +G QLH +K+G V V N L+ MY KC +
Sbjct: 362 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDN 421
Query: 426 LGSARELFNFMEDPDVVSWSSLIV-------------------------------GYAQF 454
L SA +F FM + D+VSW+S+I Y Q
Sbjct: 422 LQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQH 481
Query: 455 GCGEEALKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTR 512
G E+ L+++ M S VRP+ VT V + C+ +G + G Q+ R ++ G+I
Sbjct: 482 GAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK--VGLILDT 539
Query: 513 ERRSCVVDLLARAGRVHEAE---DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE- 568
+ V+ + ++ GR+ EA DF+N DIV W +++ HG +GK+A E
Sbjct: 540 SVANAVITMYSKCGRILEARKVFDFLNV----KDIVSWNAMITGYSQHG---MGKQAIEI 592
Query: 569 --NILK 572
+ILK
Sbjct: 593 FDDILK 598
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 109/266 (40%), Gaps = 38/266 (14%)
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR------- 430
F D + +C A +L LH ++ GLA VF+ N L+ Y+ CG+L AR
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66
Query: 431 -------------------------ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
ELF M DV SW++L+ GY Q +L+ F
Sbjct: 67 AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126
Query: 466 RMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M SG PN T + +C +G LQL ++Q ++G + + +VD+ R
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQ-KFGSQDDSDVAAALVDMFVR 185
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
G V A ++ L+ KT+G VD A E + + + ++
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYG-VD---HALELFDSMPERDVVSWNMM 241
Query: 585 CNIYASSGKWEEVARLMGSMKERGVR 610
+ + SG+ E ++ M+ +GVR
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVR 267
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 195/661 (29%), Positives = 321/661 (48%), Gaps = 85/661 (12%)
Query: 2 LIMCFFICHLPRWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYN 61
LI +F C P DA+ L L+ G VV W+ + + L+
Sbjct: 195 LIYMYFSCGRP------LDAWRLFKELEDKGNVV---------AWNV-MIGGFGENGLWE 238
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
+L + L N N ++ +++ +SAC + G +VH ++ + D + +
Sbjct: 239 NSLEVY-LLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSL 297
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
L MY KC +EDA VFD++ + W AMI+ NG+ +++Y QM + PD
Sbjct: 298 LTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDS 357
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T +++ +C + GR +HA ++K S++ Q+AL+ MY+K DA ++F++
Sbjct: 358 LTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNT 417
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN--EAMSLFS 299
I +D+ +WGSMI GF C N EA+ ++
Sbjct: 418 IKGRDVVAWGSMISGF------------------------------CQNRKYMEALEFYN 447
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------ 353
M PD + S++ ACT ++ G IH IK G +V V ++++
Sbjct: 448 SMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFN 507
Query: 354 --HQAGELF----------------------------RLFSLMLASQTKPDHITFNDVMG 383
+G +F LFS M PD ++ V+
Sbjct: 508 FPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLV 567
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+ +++A L G +H Y+++ + D+ + N L+DMY+KCG L A+ +F M ++V+
Sbjct: 568 SVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVT 627
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+ +I G G +A+ LF MRS G+ P+ +T + +LT+C+H G +EEGL+L+++M
Sbjct: 628 WNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMT 687
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
E+GI P E +VDLL RAGR+ +A F+ + + D +W SLL SC+ H NV++G
Sbjct: 688 VEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELG 747
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
K AA +L I+P+ + V L N+Y + + A L SMKE+G++K PG SWIE+
Sbjct: 748 KLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNS 807
Query: 624 I 624
I
Sbjct: 808 I 808
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 238/543 (43%), Gaps = 79/543 (14%)
Query: 53 SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC- 111
+L +Q Y +AL F N R TY L+ AC L +LQ G+ +H I++
Sbjct: 26 TLVQQGQYVDAL---QFYSRNPLNATR-FTYPSLLKACGFLSNLQYGKTIHSTIITKGFF 81
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-----RNVVSWTAMIAGCSQNGQENAAI 166
D + ++N Y KCGS +A VFD++P+ ++V W +++ G + G + I
Sbjct: 82 YSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGI 141
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ +M G+ PD ++ ++ A G +G +Q+H + ++ ++ LI MY
Sbjct: 142 AQFCRMQLFGVRPDAYSLCILLGASDG--HLGYAKQIHGYSVRKVFYGDPFLESGLIYMY 199
Query: 227 TKFDRILDAWNVFSSIARK-DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
R LDAW +F + K ++ +W MI GF + N +E LA
Sbjct: 200 FSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWE---NSLEVYLLAK-------- 248
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
NE + L S + S L AC + GMQ+H ++K GF ++
Sbjct: 249 ------NENVKLVSA-----------SFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDP 291
Query: 346 PVCNAILQ--------HQAGELF----------------------------RLFSLMLAS 369
VC ++L A +F +++ M
Sbjct: 292 YVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVL 351
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
Q PD +T +V+ +C + S + G +H ++K + +V + + L+ MY KCG+ A
Sbjct: 352 QIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDA 411
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+FN ++ DVV+W S+I G+ Q EAL+ + M G +P+ + V++AC+ +
Sbjct: 412 NSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGL 471
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
V G ++ + G+ S +VD+ ++ + + + M ++V W S
Sbjct: 472 KNVNLGCTIHGLAIKS-GLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPL-KNLVAWNS 529
Query: 550 LLA 552
+++
Sbjct: 530 IIS 532
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL-DVFVM 413
Q G+ + T+ ++ AC +++L+ G +H I+ G D ++
Sbjct: 29 QQGQYVDALQFYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYIT 88
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDP-----DVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
L++ Y KCGS G+A ++F+ + + DV W+S++ GY +FG +E + F RM+
Sbjct: 89 TSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQ 148
Query: 469 SSGVRPNHVTLVGVLTAC-SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
GVRP+ +L +L A H+G ++ + Y + + YG P E S ++ + GR
Sbjct: 149 LFGVRPDAYSLCILLGASDGHLGYAKQ-IHGYSVRKVFYG-DPFLE--SGLIYMYFSCGR 204
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+A ++ ++V W ++ +G
Sbjct: 205 PLDAWRLFKELEDKGNVVAWNVMIGGFGENG 235
>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 178/593 (30%), Positives = 297/593 (50%), Gaps = 67/593 (11%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
+F+++ ++ Y ++ C ++ + G +H H++++ D L+ ++ Y K
Sbjct: 141 EFVKDWNKQKLESKYYEGIL--CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVK 198
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI 187
G + AR VFD MP+R+VVSWTAM++G SQNG+ A L+ M G+ +QFT+GS
Sbjct: 199 VGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSA 258
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+RAC+ L C+ +G Q+ + K +L ++AL+ ++K ++ DA +F ++ +D+
Sbjct: 259 LRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDV 318
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
S WN +I G A A+++ +F M L+
Sbjct: 319 VS----------------------------WNAMIGGYAVQGFADDSFCMFRSMLRGGLV 350
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------- 357
PD T+ S+L A L QIH I + G+ S V ++ A
Sbjct: 351 PDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDL 410
Query: 358 -------ELFR--------------------LFSLMLASQTKPDHITFNDVMGACAAMAS 390
+LF LF M D + ++ CA +AS
Sbjct: 411 RKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLAS 470
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
+GTQ+H + +K + DV + N L+DMY K G + A+ F+ ME+ +V+SW+SLI G
Sbjct: 471 FALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISG 530
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
YA+ G G A+ L+++M S G +PN VT + +L ACSH GL EG + + M N+Y I P
Sbjct: 531 YAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKP 590
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
E SC+VDL AR G + EA + + ++ + +W ++L + +G + +GK AA N+
Sbjct: 591 RAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNL 650
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+ P NS V+L +IY+++G W++ ++ M+ER +K G S+ + K
Sbjct: 651 FNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 703
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 178/586 (30%), Positives = 294/586 (50%), Gaps = 70/586 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ ACS+L L+ R VH H + D + ++++Y KC S A VF M
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM 190
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+VV+W AM+AG + +G+ + I + ++Q P+ T +++ + + GR
Sbjct: 191 PARDVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGR 249
Query: 202 QLHAHVIKS----EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
+HA+ +++ +H ++ AL+ MY K ++
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLV------------------------ 285
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL-IPDGLTVRSL 316
+A VF M N +W+ ++ G C EA SLF +M + L +V S
Sbjct: 286 ----YASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASA 341
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------ 352
L AC + L G Q+H+ + K G ++++ N++L
Sbjct: 342 LRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDT 401
Query: 353 ------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+A E FR+F M A +PD T ++ AC+ +A+L+ G H
Sbjct: 402 VSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGS 461
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++ G+A + + N L+DMY KCG + +R++F+ M D+VSW+++I GY G G+EA
Sbjct: 462 VIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEA 521
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
LF M+ P+ VT + +++ACSH GLV EG + + +M ++YGI P E +VD
Sbjct: 522 TALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVD 581
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LLAR G + EA FI M D+ VW +LL +C+ H N+D+GK+ + I ++ P +
Sbjct: 582 LLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGN 641
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NI++++G+++E A + KE+G +K PG SWIEI +HA
Sbjct: 642 FVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHA 687
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 221/487 (45%), Gaps = 49/487 (10%)
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
CQ D HN ++ CG L AR +FD++P + + A+I S G A
Sbjct: 67 CQID---HNRMI-----CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRS 118
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+ P+ +TF +++ACS L + R +H H ++ + L AL+ +Y K
Sbjct: 119 LRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCA 178
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFS-KLDFARTV-----FNEMESPNLASWNTIIA- 283
A VF + +D+ +W +M+ G++ ++ T+ + +PN ++ ++
Sbjct: 179 SFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPL 238
Query: 284 ----GVASCSNANEAMSL----FSEMGDRELIPDGLTVRSLLCACTSPLS-LYQGMQIHS 334
G S A A S+ + D L+ L C S +++ M + +
Sbjct: 239 LAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRN 298
Query: 335 YIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ---TKPDHITFNDVMGACAAMASL 391
+ +C +L E F LF MLA P + + ACA ++ L
Sbjct: 299 EVTWSALVGGFVLCGRML-----EAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDL 351
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+G QLH + K+GL D+ N L+ MY K G + A LF+ M D VS+S+L+ GY
Sbjct: 352 CLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGY 411
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL-----QLYRIMQNEY 506
Q G +EA ++FR+M++ V+P+ T+V ++ ACSH+ ++ G + R + +E
Sbjct: 412 VQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASET 471
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
I + ++D+ A+ GR+ + + M DIV W +++A HG +GK A
Sbjct: 472 SIC------NALIDMYAKCGRIDLSRQIFDVMP-ARDIVSWNTMIAGYGIHG---LGKEA 521
Query: 567 AENILKI 573
L +
Sbjct: 522 TALFLDM 528
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 175/393 (44%), Gaps = 40/393 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFS-SLCKQNLYNEALVAF-DFLQNNTNFR 77
D + C L A V ++ R + W + LC + L EA F D L F
Sbjct: 276 DMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRML--EAFSLFKDMLAQGLCF- 332
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ P++ A + AC++L L LG+++H + S D N +L+MY K G ++ A +
Sbjct: 333 LSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTL 392
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD+M ++ VS++A+++G QNG+ + A ++ +M + PD T S+I ACS L +
Sbjct: 393 FDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAAL 452
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+ H VI S NALI MY K RI + +F + +DI SW +MI G+
Sbjct: 453 QHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGY 512
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
I G+ EA +LF +M + PD +T L+
Sbjct: 513 G-----------------------IHGL-----GKEATALFLDMKHQACEPDDVTFICLI 544
Query: 318 CACTSPLSLYQG-----MQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTK 372
AC+ + +G M H Y I + + + L + G L + + K
Sbjct: 545 SACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVD--LLARGGFLDEAYQFIQGMPLK 602
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
D + ++GAC ++++G Q+ I + G
Sbjct: 603 ADVRVWGALLGACRVHKNIDLGKQVSSMIQQLG 635
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 171/566 (30%), Positives = 310/566 (54%), Gaps = 49/566 (8%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P N +L Y K ++ A +FD MP+R+VVSW M++ SQ+G+ A+++ V
Sbjct: 201 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ D T+ S + AC+ L + G+QLHA VI++ +AL+ +Y K
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 320
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTV--FNEMESP-------NLASW--- 278
+A VF+S+ ++ +W +I GF + F +V FN+M + LA+
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 279 -----------------------------NTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
N++I+ A C N A ++F M +++++
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIV-- 438
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLA 368
+ S++ A + ++ + + + +K + + A +QH A E R++ +ML+
Sbjct: 439 --SWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 496
Query: 369 SQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ +PD +T+ + CA + + ++G Q+ +K GL +D V N ++ MY KCG +
Sbjct: 497 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 556
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
AR++F+F+ D+VSW+++I GY+Q G G++A+++F + G +P++++ V VL+ CS
Sbjct: 557 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 616
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLV+EG + +M+ + I P E SC+VDLL RAG + EA+D I+ M VW
Sbjct: 617 HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVW 676
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL++CK HGN ++ + AA+++ ++D +S + +L+ IYA +GK ++ A++ M+++
Sbjct: 677 GALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 736
Query: 608 GVRKVPGQSWIEIQTKIHA-SGNDIS 632
G++K PG SW+E+ K+H +D+S
Sbjct: 737 GIKKNPGYSWMEVDNKVHVFKADDVS 762
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 242/546 (44%), Gaps = 88/546 (16%)
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+L P+ + HN +LN Y K G L DA +F MP R+V SW +++G Q+ Q +
Sbjct: 62 LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVS 121
Query: 166 IELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
+E ++ M +SG P+ FT +++C L L QL A V K + AL+
Sbjct: 122 LETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVD 181
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTI 281
M+ + + A +F I + SM+ G+ K +D A +F+ M ++ SWN +
Sbjct: 182 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 241
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
++ ++ EA+ + +M + + D T S L AC SL G Q+H+ +I+
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 301
Query: 342 YSNVPVCNAILQHQAG------------------------------------ELFRLFSL 365
+ + V +A+++ A E LF+
Sbjct: 302 HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQ 361
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
M A D ++ C + L +G QLH +K+G V V N L+ MY KC +
Sbjct: 362 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDN 421
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQF------------------------------- 454
L SA +F FM + D+VSW+S+I Y+Q
Sbjct: 422 LQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQH 481
Query: 455 GCGEEALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTR 512
G E+ L++++ M S VRP+ VT V + C+ +G + G Q+ R ++ G+I
Sbjct: 482 GAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK--VGLIIDT 539
Query: 513 ERRSCVVDLLARAGRVHEAE---DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE- 568
+ V+ + ++ GR+ EA DF+N DIV W +++ HG +GK+A E
Sbjct: 540 SVANAVITMYSKCGRILEARKVFDFLNV----KDIVSWNAMITGYSQHG---MGKQAIEI 592
Query: 569 --NILK 572
+ILK
Sbjct: 593 FDDILK 598
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF-M 436
F D + +C A +L LH ++ GLA VF+ N L+ Y+ CG+L AR L +
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRM----------------------------- 467
P+V++ + ++ GYA+ G +A++LF RM
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126
Query: 468 ---RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RS PN TL + +C +G LQL ++Q ++ E + +VD+ R
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ-KFDSQDDSEVAAALVDMFVR 185
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLAS-CKTHGNVDVGKRAAENILKIDPTNSAALVL 583
G V A ++ + + S+LA KT+G VD A E + + + +
Sbjct: 186 CGAVDLASRLFVRIK-EPTMFCRNSMLAGYVKTYG-VD---HALELFDSMPERDVVSWNM 240
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVR 610
+ + + SG+ E ++ M+ +GVR
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVR 267
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/552 (30%), Positives = 294/552 (53%), Gaps = 63/552 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TYA ++SAC+++ Q G+ +H I+ + D ++ N +++MY KCG ++ ++ VF+ +
Sbjct: 127 TYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTL 186
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ NVV+WT++I+G + G + +++ QM + ++ D F +I+ C G + +G
Sbjct: 187 REHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGE 246
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH +K+ S + NA ++MY K F K
Sbjct: 247 QLHGFTVKTGMNSSVPVGNATLSMYAK-------------------------CGDFEKAS 281
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A F M + ++ SW T+I + N A F+ M +R +I +
Sbjct: 282 LA---FETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVI-----------SWN 327
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
+ L Y + F+ E +L+ LML + +PD ITF +
Sbjct: 328 AMLGAY---------CQNSFWE--------------EGLKLYILMLRQEVRPDWITFVTM 364
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+GAC+ +A ++GTQ+ +K GL DV V+N + +Y +CG + A+ LF+ +++ ++
Sbjct: 365 IGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNL 424
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SW+S++ GYAQ G G + +++F+ M +G +P+H+T + +L+ CSH GLV+E +
Sbjct: 425 ISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNS 484
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M ++GI T E C+VDL RAG + A D I+QM F + +W +LL++C+ H + +
Sbjct: 485 MTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTE 544
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+ + A +N+L+++ N + +LL N Y+S G+ E V+ + MKE+ V+K PG SWIE+
Sbjct: 545 MAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIEVC 604
Query: 622 TKIHA-SGNDIS 632
++H + ND S
Sbjct: 605 NRVHVFTANDTS 616
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 192/439 (43%), Gaps = 72/439 (16%)
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
ACS + + + QLH K G++ + QN++I MY K D I A VF I + + S
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 250 WGSMIDGFSKL-DFARTV--FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
W MI G+SKL + R + F +M + SWNTII+ + +++ F EM +
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------- 357
P+ +T S+L AC + G +H+ I++ + +V V N ++ A
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 358 ---------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
E++ +F M D+ ++G C +
Sbjct: 182 VFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETN 241
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC--------------------------- 423
+ +G QLH + +KTG+ V V N + MY KC
Sbjct: 242 ISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITS 301
Query: 424 ----GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
G++ AR+ FN M + +V+SW++++ Y Q EE LKL+ M VRP+ +T
Sbjct: 302 FSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITF 361
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
V ++ ACS + + + G Q+ + G+ + + L +R GR+ EA++ + +
Sbjct: 362 VTMIGACSELAISKLGTQILS-QAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQ 420
Query: 540 FDDDIVVWKSLLASCKTHG 558
+ +++ W S++ +G
Sbjct: 421 -EKNLISWNSIMGGYAQNG 438
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
+ + C+ + + E L + + +RP T+ +I ACS L +LG ++ +
Sbjct: 329 MLGAYCQNSFWEEGLKLYILMLRQ---EVRPDWITFVTMIGACSELAISKLGTQILSQAV 385
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
D + N + +Y +CG +E+A+ +FD + ++N++SW +++ G +QNG+ IE
Sbjct: 386 KVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIE 445
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACS 192
++ ML +G PD T+ +I+ CS
Sbjct: 446 IFQNMLMAGCKPDHITYIAILSGCS 470
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 78/315 (24%)
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
AC+++ + + QLH K G + + N ++DMY+KC ++ +A ++F +E P + S
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 444 WSSLIVGYAQFGCGEEALKLFRRM--RSS-----------------------------GV 472
W+ +I GY++ A+ FR+M R S G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY-----------------GIIPTRER 514
+PN +T VL+AC+++ + G L+ RI++ E G+I +R
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 515 R------------SCVVDLLARAGRVHEAEDFINQMAFD---DDIVVWKSLLASCKTHGN 559
+ ++ +A G E D QM D D + ++L C+ N
Sbjct: 182 VFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETN 241
Query: 560 VDVGKRAAENILKID-----PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ +G++ +K P +A L ++YA G +E+ + +M V
Sbjct: 242 ISIGEQLHGFTVKTGMNSSVPVGNATL----SMYAKCGDFEKASLAFETMAAHDVI---- 293
Query: 615 QSWIEIQTKIHASGN 629
SW + T SGN
Sbjct: 294 -SWTTMITSFSHSGN 307
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 279/533 (52%), Gaps = 53/533 (9%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
R++ D + + K D V +L+ Y + +E+A +F+ MP +NVVSW MI G +N
Sbjct: 26 RRLFDRVDAIK---DVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKN 82
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
+ + AIE++ +M H +++S
Sbjct: 83 REVDKAIEVFERM---------------------------------------HERNMVSW 103
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLA 276
NA+IA + R+ +A F + ++D+ SW +M+ G ++ +D AR VF+ M N+
Sbjct: 104 NAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVV 163
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
SWN ++ G A +EA LF M +R L + +++ L ++ + +
Sbjct: 164 SWNAMVTGYAKNMRLDEAFDLFERMPERNLS----SWNTMITGFIQNGELAWARKVFNEM 219
Query: 337 IKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQ-TKPDHITFNDVMGACAAMASLEMG 394
+K S + +Q E ++F M+ +P+ TF +V+GAC+ MA L G
Sbjct: 220 PEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEG 279
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN--FMEDPDVVSWSSLIVGYA 452
Q+H I K+ FV + L++MY KCG L AR++F+ + D+V W+ +I YA
Sbjct: 280 QQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYA 339
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
GCG EA++LF M+ G +PN V+ V +L+ACSH GLV+EGL + + + I
Sbjct: 340 HHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLRE 399
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ +C+VDL RAGR+ EA DFI Q+ +W LLA C HG++++G+ AA+ + K
Sbjct: 400 DHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEK 459
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
DP N+ +LL NIYAS KW E +R+ MKE+G++K PG SWIE+ ++H
Sbjct: 460 EDPENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVH 512
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 21/239 (8%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ + ++ AL F + + R T+ +++ ACS + L G++VH I S
Sbjct: 230 MITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKS 289
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDE--MPQRNVVSWTAMIAGCSQNGQENAAIE 167
Q + + +LNMY KCG L AR +FD+ + QR++V W MIA + +G AIE
Sbjct: 290 VYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIE 349
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACS--GLCCVG------LGRQLHAHVIKSEHGSHLISQ 219
L+ M G P+ ++ ++ ACS GL G LGR + + H
Sbjct: 350 LFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHA------ 403
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMIDG---FSKLDFARTVFNEMESPN 274
L+ + + R+ +A++ + K +S WG ++ G L+ + E+E +
Sbjct: 404 -CLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEKED 461
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M + DVV+W+++I GY + G +A +LF R+ + + VT +L+ + +EE
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAI---KDVVTWTAMLSGYVRLKRIEEA 57
Query: 496 LQLYRIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+L+ +M P + S ++D + V +A + +M + ++V W +++A+
Sbjct: 58 ERLFEVM-------PVKNVVSWNTMIDGYGKNREVDKAIEVFERM-HERNMVSWNAVIAA 109
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
G V+ +R + + K D + +V+ A SG+ +E ++ M ER V
Sbjct: 110 LVQCGRVEEARRRFDEMPKRDVISWTTMVMGL---ARSGRVDEARKVFDRMPERNV 162
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 294/582 (50%), Gaps = 34/582 (5%)
Query: 62 EALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
EA FD ++ I+PS T L+ S L +Q +H + D L N
Sbjct: 153 EAFSLFDEMRRQG---IQPSSVTMLSLLFGVSELAHVQC---LHGSAILYGFMSDINLSN 206
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+L+MYGKC ++E +R +FD M QR++VSW ++++ +Q G + L M G P
Sbjct: 207 SMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEP 266
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D TFGS++ + + LGR LH ++++ + +LI MY K I A+ +F
Sbjct: 267 DPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMF 326
Query: 240 SSIARKDITSWGSMIDGFSK---LDFARTVFNEM----ESPNLASWNTIIAGVASCSNAN 292
KD+ W +MI G + D A VF +M + A+ ++I A + N
Sbjct: 327 ERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYN 386
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK----------GFY 342
S+ M EL D T SL+ L Q + + K+ G+
Sbjct: 387 LGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYA 446
Query: 343 SNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
N VC A+ LF+ M + PD IT ++ CA+ L +G +H +++
Sbjct: 447 QNGYVCKALF---------LFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVI 497
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ GL + V L+DMY KCG L A+ FN M D+VSWS++IVGY G GE AL+
Sbjct: 498 RNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALR 557
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+ + SG++PNHV + VL++CSH GLVE+GL +Y M ++GI P E +CVVDLL
Sbjct: 558 FYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLL 617
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
+RAGRV EA + + D + V +L +C+ +GN ++G A +IL + P ++ V
Sbjct: 618 SRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFV 677
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
L + YAS KWEEV M+ G++K+PG S+I+I I
Sbjct: 678 QLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTI 719
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 241/500 (48%), Gaps = 15/500 (3%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+ ACSSL LG +H IL S DA + + ++N Y K G + AR VFD M
Sbjct: 71 TFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFM 130
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+RNVV WT++I S+ G+ A L+ +M + G+ P T S++ S L V +
Sbjct: 131 PERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---Q 187
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH I S + N++++MY K I + +F + ++D+ SW S++ ++++
Sbjct: 188 CLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIG 247
Query: 262 FA-------RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+ +T+ + P+ ++ ++++ AS L ++ D
Sbjct: 248 YICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVET 307
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQTKP 373
SL+ ++ ++ + K + + ++Q+ A + +F ML K
Sbjct: 308 SLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKS 367
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
T V+ ACA + S +GT +H Y+ + L +D+ N L+ M+ KCG L + +F
Sbjct: 368 STATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVF 427
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ M ++VSW+++I GYAQ G +AL LF MRS P+ +T+V +L C+ G +
Sbjct: 428 DKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLH 487
Query: 494 EGLQLYR-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G ++ +++N G+ P + +VD+ + G + A+ NQM D+V W +++
Sbjct: 488 LGKWIHSFVIRN--GLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMP-SHDLVSWSAIIV 544
Query: 553 SCKTHGNVDVGKRAAENILK 572
HG + R L+
Sbjct: 545 GYGYHGKGETALRFYSKFLE 564
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 192/449 (42%), Gaps = 69/449 (15%)
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
S+ A+I S G + Y ML++ + D +TF S+++ACS L LG LH +
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ S ++LI Y KF GF+ D AR VF
Sbjct: 96 LVSGLSLDAYIASSLINFYAKF--------------------------GFA--DVARKVF 127
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
+ M N+ W +II + EA SLF EM + + P +T+ SLL + L
Sbjct: 128 DFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVS---ELA 184
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------------H 354
+H I GF S++ + N++L
Sbjct: 185 HVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYA 244
Query: 355 QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q G E+ L M +PD TF V+ A+ L++G LH I++T LD
Sbjct: 245 QIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAH 304
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V L+ MY+K G++ A +F D DVV W+++I G Q G ++AL +FR+M G
Sbjct: 305 VETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFG 364
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
V+ + T+ V+TAC+ +G G ++ M + + S +V + A+ G + ++
Sbjct: 365 VKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNS-LVTMHAKCGHLDQS 423
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNV 560
++M ++V W +++ +G V
Sbjct: 424 SIVFDKMN-KRNLVSWNAMITGYAQNGYV 451
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 45/347 (12%)
Query: 272 SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-GM 330
S + S+N II +S + ++ ++ M + D T SLL AC+S L+L+ G+
Sbjct: 31 SATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSS-LNLFSLGL 89
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQAG--------------------------------- 357
+H I+ G + + ++++ A
Sbjct: 90 SLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTG 149
Query: 358 ---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN 414
E F LF M +P +T ++ + +A ++ LH + G D+ + N
Sbjct: 150 RVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQC---LHGSAILYGFMSDINLSN 206
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
++ MY KC ++ +R+LF++M+ D+VSW+SL+ YAQ G E L L + MR G P
Sbjct: 207 SMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEP 266
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+ T VL+ + G ++ G L+ +I++ + + E + ++ + + G + A
Sbjct: 267 DPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVE--TSLIVMYLKGGNIDIAFR 324
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
+ + D D+V+W ++++ +G+ D +LK +S A
Sbjct: 325 MFER-SLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTA 370
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 286/547 (52%), Gaps = 53/547 (9%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-----SLEDARMVFDE 140
L + C++ SL ++ H IL + D+ + ++ Y S E + VFD
Sbjct: 40 LNTQCTT--SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDF 97
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ + NV W MI C +N + AI LY +M+ + P+++T+ ++++ACS V G
Sbjct: 98 VRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEG 157
Query: 201 RQLHAHVIKSEHGS--HLISQNALIAMYTKFDRILDAWNVFSSIARK-DITSWGSMIDG- 256
Q+HAH++K G H++S + I MY F R+++A + + D W +MIDG
Sbjct: 158 VQVHAHLVKHGLGGDGHILS--SAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGY 215
Query: 257 --FSKLDFARTVFNEMESPNL-ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
F +++ AR +F M ++ ++WN +I+G + C A F EM +R+ I
Sbjct: 216 LRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS----- 270
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKP 373
+ M I YI + F E +F M + +P
Sbjct: 271 -------------WSAM-IDGYIQEGCFM---------------EALEIFHQMQKEKIRP 301
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
V+ ACA + +L+ G +H Y + + LD + L+DMY KCG + A E+F
Sbjct: 302 RKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVF 361
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
M + +V SW+++I G A G E+A+ LF +M + PN +T VGVL AC+H GLV+
Sbjct: 362 EKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQ 418
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+GL ++ M+ EYG+ P E C+VDLL RAG + EAE ++ + + VW +LL +
Sbjct: 419 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 478
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C+ HGNV++G+R + +L+++P NS LL NIYA +G+WEEV + MKERG++ P
Sbjct: 479 CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTP 538
Query: 614 GQSWIEI 620
G S I++
Sbjct: 539 GTSIIDL 545
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 195/484 (40%), Gaps = 122/484 (25%)
Query: 36 DSFLRRFDDIWDFDLF-----SSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
+S LR FD + ++F +C +N NE A RP+ TY ++
Sbjct: 89 ESSLRVFDFVRKPNVFLWNCMIKVCIEN--NEPFKAILLYYEMVVAHSRPNKYTYPAVLK 146
Query: 89 ACSSLRSLQLGRKVH-----------DHILSSKC---------------------QPDAV 116
ACS + G +VH HILSS + DAV
Sbjct: 147 ACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV 206
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMP--------------------------------QR 144
N +++ Y + G +E AR +F+ MP +R
Sbjct: 207 CWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKER 266
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+ +SW+AMI G Q G A+E++ QM + + P +F S++ AC+ L + GR +H
Sbjct: 267 DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIH 326
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ ++ + +L+ MY K RI AW VF ++ K+++SW
Sbjct: 327 TYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSW-------------- 372
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
N +I G+A A +A+ LFS+M ++ P+ +T +L AC
Sbjct: 373 --------------NAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGG 415
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ +G+ I + + K+ Y P C L +AG L ++ + T+P +
Sbjct: 416 LVQKGLTIFNSMRKE--YGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 473
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG-----LMDMYVKCGSLGSARELFN 434
++GAC ++E+G ++ + L++ N L ++Y K G E+
Sbjct: 474 ALLGACRKHGNVELGERV------GKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRK 527
Query: 435 FMED 438
M++
Sbjct: 528 LMKE 531
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 39/345 (11%)
Query: 19 WDA----FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
W+A F C +++ A E D R + W + ++ + EAL F +Q
Sbjct: 240 WNAMISGFSRCGMVEVAREFFDEMKERDEISWS-AMIDGYIQEGCFMEALEIFHQMQKE- 297
Query: 75 NFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
+IRP + ++SAC++L +L GR +H + + Q D VL +++MY KCG ++
Sbjct: 298 --KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRID 355
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
A VF++M + V SW AMI G + +G+ AI+L+ +M + P++ TF ++ AC+
Sbjct: 356 LAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACA 412
Query: 193 GLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS- 249
V G + + ++ E+G + ++ + + + +A V SSI + +
Sbjct: 413 HGGLVQKGLTIF-NSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAV 471
Query: 250 WGSMIDGFSKL------DFARTVFNEMESPNLASW---NTIIAGVASCSNANEAMSLFSE 300
WG+++ K + + E+E N + + I A E L E
Sbjct: 472 WGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKE 531
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
G + TS + L +G ++H +II G + V
Sbjct: 532 RGIK------------TTPGTSIIDLGRG-EVHKFIIGDGSHPQV 563
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 180/604 (29%), Positives = 308/604 (50%), Gaps = 73/604 (12%)
Query: 65 VAFDF---LQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
V F+F L +N R+ P ++A ++ L+ LQ ++H I++S + L N
Sbjct: 4 VNFNFYRHLSSNPTQRLCPLAQSHASILRKLKDLKPLQ---QIHAQIITSGLTHNTFLSN 60
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++N Y CG L DA+ +F P +NVVSWT +I+G ++N AI+++ +M P
Sbjct: 61 SLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKP 120
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+ T S++ A + L + + + +H ++ ++ + AL+ MY+KF + A +F
Sbjct: 121 NAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLF 180
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
S++ +++ SW +++ G+S F+ EA+ LF+
Sbjct: 181 ESMSERNVVSWNAIVSGYSDHGFSE----------------------------EAIDLFN 212
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------ 353
M + L+ D T+ SL+ A S L G IH +II+ G+ ++ + A++
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 354 -----HQA-GELF------------------------RLFSLMLASQT-KPDHITFNDVM 382
H+ E+F + F+ ML Q K D I ++
Sbjct: 273 CVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGIL 332
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
+C+ +L+ G ++H +KT A ++FV + ++DMY CG+L A+ F M + DVV
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W+++I G G G +A+ LF +M+ SG+ P+ T V VL ACSH G+V EGLQ++ M
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
IP + +CV+D+L RAG++ A FIN M F D V+ +LL +C+ HGN+ +
Sbjct: 453 VKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
G ++ I +++P ++ VLL N+YA +G WE V S++ + ++K PG S IEI
Sbjct: 513 GHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQ 572
Query: 623 KIHA 626
+I+
Sbjct: 573 EIYT 576
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 208/468 (44%), Gaps = 69/468 (14%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+A+ C LL A ++ + W L S L K + + EA+ F + NF+
Sbjct: 64 NAYVYCGLLADAKQIFHHTPCKNVVSWTI-LISGLAKNDCFVEAIDVFREMTMG-NFKPN 121
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T + ++ A ++L +++ + VH + + + + +++MY K G + AR +F+
Sbjct: 122 AVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFE 181
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M +RNVVSW A+++G S +G AI+L+ M + GL+ D +T S+I A + C+ +
Sbjct: 182 SMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQV 241
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G +H +I++ + + + AL+ +Y + + DA VFS + KD+ +W M+ GFS
Sbjct: 242 GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFS- 300
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLC 318
S + + A+ F++M G + L D + + +L
Sbjct: 301 ---------------------------SGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------------------- 357
+C+ +L QG ++H+ IK F +N+ V +A++ A
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393
Query: 358 ---------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+ LF M S PD TF V+ AC+ + G Q+ +++
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453
Query: 403 KTGLALDVFVMNG-LMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
KT + ++D+ + G L +A N M PD +S+L+
Sbjct: 454 KTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLL 501
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 275/545 (50%), Gaps = 68/545 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L AC+ + + G +H +L + + N ++NMYG CG L A+ VFDEM
Sbjct: 79 TYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEM 138
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R++VSW +++ G Q + + ++ M +G+ D T ++ AC+ L G+
Sbjct: 139 PERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVAD 198
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+ ++ ++ + N LI MY R+ + +
Sbjct: 199 AMVDYIEENNVEIDVYLGNTLIDMY----------------GRRGL------------VH 230
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR VF++M+ NL SWN +I G N A LF M R++I + T
Sbjct: 231 LARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVI-----------SWT 279
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---ELFRLFSLMLASQTKPDHITF 378
+ ++ Y QAG E RLF M+ S+ KPD IT
Sbjct: 280 NMITSYS--------------------------QAGQFTEALRLFKEMMESKVKPDEITV 313
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ ACA SL++G H YI K + D++V N L+DMY KCG + A E+F M
Sbjct: 314 ASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRK 373
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D VSW+S+I G A G + AL F RM V+P+H VG+L AC+H GLV++GL+
Sbjct: 374 KDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEY 433
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ M+ YG+ P + CVVDLL+R+G + A +FI +M D+V+W+ LL++ + HG
Sbjct: 434 FESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHG 493
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N+ + + A + +L++DP+NS VL N YA S +WE+ ++ M++ V+K G S I
Sbjct: 494 NIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCI 553
Query: 619 EIQTK 623
E++ +
Sbjct: 554 EMELQ 558
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 173/391 (44%), Gaps = 71/391 (18%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A +F ++ P L WN +I G + NEA+ +++ M + L+ + LT L AC
Sbjct: 30 AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------------------- 357
+ G IH+ ++K GF S++ V NA++
Sbjct: 90 VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSL 149
Query: 358 -----------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
E+ +F M + K D +T V+ AC ++ + + YI + +
Sbjct: 150 VCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNV 209
Query: 407 ALDVFVMNGLMDM-------------------------------YVKCGSLGSARELFNF 435
+DV++ N L+DM Y K G+L +ARELF+
Sbjct: 210 EIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDA 269
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M DV+SW+++I Y+Q G EAL+LF+ M S V+P+ +T+ VL+AC+H G ++ G
Sbjct: 270 MSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVG 329
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ +Q +Y + + ++D+ + G V +A + +M D V W S+++
Sbjct: 330 EAAHDYIQ-KYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMR-KKDSVSWTSIISGLA 387
Query: 556 THGNVDVGKRAAENILK--IDPTNSAALVLL 584
+G D +L+ + P++ A + +L
Sbjct: 388 VNGFADSALDYFSRMLREVVQPSHGAFVGIL 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 158/314 (50%), Gaps = 11/314 (3%)
Query: 301 MGDRELIPDGLTVRSLLCA-CTSPLSLYQGMQIHSYIIKKGF-YSNVPVCNAILQHQAGE 358
M + L D T+ +L+ + SP ++ + + I + + N+ + + Q E
Sbjct: 1 MVNPNLRTDPSTIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNE 60
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
R+++LM +++T+ + ACA + + G+ +H ++K G ++V N L++
Sbjct: 61 AIRMYNLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALIN 120
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY CG LG A+++F+ M + D+VSW+SL+ GY Q E L +F MR +GV+ + VT
Sbjct: 121 MYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVT 180
Query: 479 LVGVLTACSHVGL--VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+V V+ AC+ +G V + + Y I +N I + ++D+ R G VH A +
Sbjct: 181 MVKVVLACTSLGEWGVADAMVDY-IEENNVEI--DVYLGNTLIDMYGRRGLVHLARGVFD 237
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
QM + ++V W +++ GN+ + + + + D + ++ Y+ +G++ E
Sbjct: 238 QMQW-RNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMI---TSYSQAGQFTE 293
Query: 597 VARLMGSMKERGVR 610
RL M E V+
Sbjct: 294 ALRLFKEMMESKVK 307
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLIS 88
A E+ D+ +R D I ++ +S + + EAL F + + +++P T A ++S
Sbjct: 263 ARELFDAMSQR-DVISWTNMITSYSQAGQFTEALRLFKEMMES---KVKPDEITVASVLS 318
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC+ SL +G HD+I + D + N +++MY KCG +E A VF EM +++ VS
Sbjct: 319 ACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVS 378
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGL 199
WT++I+G + NG ++A++ + +ML+ + P F I+ AC +GL GL
Sbjct: 379 WTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGL 431
>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 288/565 (50%), Gaps = 75/565 (13%)
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
+VH + + DA + + ++ +Y +CGSL A VF M +VV +T++++ +NG
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
+ A+++ QM + GL P++ T S++ C G+G Q+H +++K + +
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAECP----RGIGEQIHGYMLKVMGSQSVYAST 272
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF--ARTVFNEMESPNLASW 278
ALI Y+++ DF A+TVF +ES N+ SW
Sbjct: 273 ALIDFYSRYG------------------------------DFGTAKTVFENLESKNVVSW 302
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+++ ++A+ +FSEM + P+ L AC S + G QIH IK
Sbjct: 303 CSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGS---VCLGRQIHCSAIK 359
Query: 339 KGFYSNVPVCNAIL---------------------------------QHQAGELFRLFSL 365
+ +++ V NA+L Q G + +L
Sbjct: 360 RDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVAL 419
Query: 366 MLASQTK---PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
+L ++ P+ F+ + +CA +A L G QLHC +K G V N L++MY K
Sbjct: 420 LLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSK 479
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG +GSAR F+ M+ DV+SW+SLI G AQ G AL+ F M SS RP+ T + V
Sbjct: 480 CGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSV 539
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L C+H GLV+EG +R M + YG+ PT +C++D+L R GR EA I M F+
Sbjct: 540 LVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEP 599
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D+++WK+LLASCK H N+D+GK AA+ ++++ +SA+ VL+ N+YA +W + R+
Sbjct: 600 DVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRR 659
Query: 603 SMKERGVRKVPGQSWIEIQTKIHAS 627
M E GV+K G SWIE++ ++ A+
Sbjct: 660 RMDEIGVKKDAGWSWIEVKNEVEAA 684
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 235/518 (45%), Gaps = 85/518 (16%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
PD VL L+ K G L DA +FD MP++NVV+WT I+GC++NG+ AA ++ M
Sbjct: 68 PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
L+SG+ P+ F + + AC+ +GLG Q+H+ +++ + + LI +Y++
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSR---- 183
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
L A VF ME+P++ + ++++ +
Sbjct: 184 ------------------------CGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELA 219
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK-------------- 338
A+ + +M + L P+ T+ S+L C + G QIH Y++K
Sbjct: 220 RAVDVLCQMTRQGLQPNEHTMTSMLAECPRGI----GEQIHGYMLKVMGSQSVYASTALI 275
Query: 339 ------------KGFYSNVPVCNA----------ILQHQAGELFRLFSLMLASQTKPDHI 376
K + N+ N I + + R+FS M++ +P+
Sbjct: 276 DFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEF 335
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
F+ + AC ++ +G Q+HC +K L D+ V N L+ MY + G + + +
Sbjct: 336 AFSIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKI 392
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
E+PD+VSW++ I Q G E+A+ L +M S G PN L++C+ + L+ +G
Sbjct: 393 ENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGR 452
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD----DDIVVWKSLLA 552
QL+ + + G + ++++ ++ GR+ A ++AFD D++ W SL+
Sbjct: 453 QLH-CLALKLGCDFKVCTGNALINMYSKCGRIGSA-----RLAFDVMDTHDVMSWNSLIH 506
Query: 553 SCKTHGNVDVGKRAAENILKID--PTNSAALVLL--CN 586
HG+ ++ + D P +S L +L CN
Sbjct: 507 GLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCN 544
>gi|57899090|dbj|BAD86909.1| putative PPR986-12 [Oryza sativa Japonica Group]
Length = 560
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 278/536 (51%), Gaps = 70/536 (13%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G++ AR +FDEMP+R+VV+WTAM++G + NG A++++ +M+ +G P+++T S++
Sbjct: 17 GAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVL 76
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
AC G C + LHA +A+ DR+ N I
Sbjct: 77 TACRGPCAPAMAMPLHA-----------------VAVRRGVDRMPYVVNAL-------ID 112
Query: 249 SWGSMIDGFSKLDFARTVFNEMESP-NLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
S+ S+ +G AR +F+ + S ASW ++IAG A + LF M +
Sbjct: 113 SYASLAEGVVD---ARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTM-----L 164
Query: 308 PDGLTVRSLLC-----ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-------- 354
DG+ + + C ACT + L G Q+H IKK N+ V N+++
Sbjct: 165 KDGVELSTFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARIL 224
Query: 355 QAGELFR------------------------LFSLMLASQTKPDHITFNDVMGACAAMAS 390
A LF L+L +P+ T + ACA +A+
Sbjct: 225 DARSLFDGTPERNLITWNTMIAGYSQCDPLMALQLLLEMNDEPNCFTLTSITSACADLAA 284
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L G Q+H +++ + D+ + N L+DMY KCGS+ +A+ +F+ M D SW+S+I G
Sbjct: 285 LRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAG 344
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y G G EA++LF M +GV P+HV + ++++CSH GLV+EG +R M NEY + P
Sbjct: 345 YGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQP 404
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+E VV+LLARAGR+ EA D I+ M F D VW +LL + K H NV++G+ AA I
Sbjct: 405 NKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAARKI 464
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+I+P + ++L +IYA+ KW E A S++ G RK G SWIE+ K+++
Sbjct: 465 TEINPDDVKNYIMLASIYAAGSKWGEYAFTRRSLRGIGSRKEAGISWIEVMDKMYS 520
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 37/319 (11%)
Query: 81 STYADLIS--ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
ST+A I+ AC+ + L LG+++H + + + N +++MY C + DAR +F
Sbjct: 171 STFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLF 230
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D P+RN+++W MIAG SQ A++L ++M P+ FT SI AC+ L +
Sbjct: 231 DGTPERNLITWNTMIAGYSQ-CDPLMALQLLLEMNDE---PNCFTLTSITSACADLAALR 286
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+Q+H V++ + L NAL+ MY+K I +A NVF + KD SW SMI G+
Sbjct: 287 CGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYG 346
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ NEA+ LFS M + PD + SL+
Sbjct: 347 MNGY----------------------------GNEAVQLFSSMIHAGVHPDHVVFLSLIS 378
Query: 319 ACTSPLSLYQGMQ-IHSYIIKKGFYSNVPVCNAI--LQHQAGELFRLFSLMLASQTKPDH 375
+C+ + +G S I + N V ++ L +AG L L+ PD
Sbjct: 379 SCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDE 438
Query: 376 ITFNDVMGACAAMASLEMG 394
+ ++GA ++EMG
Sbjct: 439 YVWGALLGASKMHNNVEMG 457
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 270/519 (52%), Gaps = 56/519 (10%)
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD----QFTFGSIIRACSGLCCVGLGRQL 203
SW I + G + AI L+++M S + +++C+ L LG L
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-LDF 262
HA ++S + + NAL+ +Y K S +DG + L+
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKL---------------PAPPSHSPEMDGSAVVLES 125
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
R VF+EM ++ SWNT++ G A EA+ L EM PD T+ S+L
Sbjct: 126 VRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAE 185
Query: 323 PLSLYQGMQIHSYIIKKGF--------------------------YSNVPVCNAILQHQ- 355
+ +GM++H + + GF + N+PV +AIL +
Sbjct: 186 GADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSM 245
Query: 356 -AG--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
AG E LF ML S KP +TF+ ++ AC +ASL +G QLH Y+++ G
Sbjct: 246 LAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGF 305
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+VF+ + L+DMY KCG++ AR +F+ ++ PD+VSW+++I+G+A G EAL LF R
Sbjct: 306 DGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDR 365
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M ++PNH+T + VLTACSH GLV++G + + M + YGI+P+ E + + D L R G
Sbjct: 366 MELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPG 425
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
++ EA +FI+ M VW +LL +CK H N + + A+ I ++P + + ++L N
Sbjct: 426 KLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSN 485
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
Y+SSG+W E A L SM+++G++K P SWIE++ K H
Sbjct: 486 TYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQH 524
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 117/215 (54%), Gaps = 7/215 (3%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
++ G ++H + D + + +++MY C + + VFD +P R+ + W +M+AG
Sbjct: 189 VRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAG 248
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
C+QNG + A+ L+ +ML SG+ P TF S+I AC L + LG+QLHA+VI+ +
Sbjct: 249 CAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGN 308
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR---TVFNEMES 272
+ ++LI MY K + A +F I DI SW +MI G + AR +F+ ME
Sbjct: 309 VFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMEL 368
Query: 273 PNLASWN-TIIAGVASCSNA---NEAMSLFSEMGD 303
NL + T +A + +CS+A ++ F+ M D
Sbjct: 369 GNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSD 403
>gi|125525521|gb|EAY73635.1| hypothetical protein OsI_01524 [Oryza sativa Indica Group]
Length = 560
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 278/536 (51%), Gaps = 70/536 (13%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G++ AR +FDEMP+R+VV+WTAM++G + NG A++++ +M+ +G P+++T S++
Sbjct: 17 GAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVL 76
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
AC G C + LHA +A+ DR+ N I
Sbjct: 77 TACRGPCAPAMAMPLHA-----------------VAVRRGVDRMPYVVNAL-------ID 112
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLA-SWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
S+ S+ +G AR +F+ + S A SW ++IAG A + LF M +
Sbjct: 113 SYASLAEGVVD---ARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTM-----L 164
Query: 308 PDGLTVRSLLC-----ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-------- 354
DG+ + + C ACT + L G Q+H IKK N+ V N+++
Sbjct: 165 KDGVELSTFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARIL 224
Query: 355 QAGELFR------------------------LFSLMLASQTKPDHITFNDVMGACAAMAS 390
A LF L+L +P+ T + ACA +A+
Sbjct: 225 DARSLFDGTPERNLITWNTMIAGYSQCDPLMALQLLLEMNDEPNCFTLTSITSACADLAA 284
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L G Q+H +++ + D+ + N L+DMY KCGS+ +A+ +F+ M D SW+S+I G
Sbjct: 285 LRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAG 344
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y G G EA++LF M +GV P+HV + ++++CSH GLV+EG +R M NEY + P
Sbjct: 345 YGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQP 404
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+E VV+LLARAGR+ EA D I+ M F D VW +LL + K H NV++G+ AA I
Sbjct: 405 NKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAARKI 464
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+I+P + ++L +IYA+ KW E A S++ G RK G SWIE+ K+++
Sbjct: 465 TEINPDDVKNYIMLASIYAAGSKWGEYAFTRRSLRGIGSRKEAGISWIEVMDKMYS 520
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 37/319 (11%)
Query: 81 STYADLIS--ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
ST+A I+ AC+ + L LG+++H + + + N +++MY C + DAR +F
Sbjct: 171 STFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLF 230
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D P+RN+++W MIAG SQ A++L ++M P+ FT SI AC+ L +
Sbjct: 231 DGTPERNLITWNTMIAGYSQ-CDPLMALQLLLEMNDE---PNCFTLTSITSACADLAALR 286
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+Q+H V++ + L NAL+ MY+K I +A NVF + KD SW SMI G+
Sbjct: 287 CGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYG 346
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+ NEA+ LFS M + PD + SL+
Sbjct: 347 MNGY----------------------------GNEAVQLFSSMIHAGVHPDHVVFLSLIS 378
Query: 319 ACTSPLSLYQGMQ-IHSYIIKKGFYSNVPVCNAI--LQHQAGELFRLFSLMLASQTKPDH 375
+C+ + +G S I + N V ++ L +AG L L+ PD
Sbjct: 379 SCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDE 438
Query: 376 ITFNDVMGACAAMASLEMG 394
+ ++GA ++EMG
Sbjct: 439 YVWGALLGASKMHNNVEMG 457
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 186/440 (42%), Gaps = 85/440 (19%)
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+++K T++ S + + AR +F+EM ++ +W +++G AS EA+ +F M
Sbjct: 1 MSQKHATTFISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRM 60
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---- 357
P+ T+ S+L AC P + M +H+ +++G V NA++ A
Sbjct: 61 VAAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEG 120
Query: 358 -----ELF-----------------------------RLFSLMLASQTKPDHITFNDVMG 383
LF RLF ML + + +
Sbjct: 121 VVDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALH 180
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
AC + L +G QLH +K L +++ V+N L+DMY C + AR LF+ + ++++
Sbjct: 181 ACTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLIT 240
Query: 444 WSSLIVGYAQFGCGE-EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RI 501
W+++I GY+Q C AL+L M PN TL + +AC+ + + G Q++ +
Sbjct: 241 WNTMIAGYSQ--CDPLMALQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAV 295
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD------------------- 542
++ Y + + +VD+ ++ G + A++ ++M D
Sbjct: 296 LRRSYS--DDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNE 353
Query: 543 ---------------DIVVWKSLLASCKTHGNVDVG---KRAAENILKIDPTNSAALVLL 584
D VV+ SL++SC G VD G R+ N + P N +
Sbjct: 354 AVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQP-NKEVYGSV 412
Query: 585 CNIYASSGKWEEVARLMGSM 604
N+ A +G+ E L+ +M
Sbjct: 413 VNLLARAGRLREALDLIDTM 432
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 303/627 (48%), Gaps = 76/627 (12%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD I D++ S+ ++EA+ F L + R T+ ++ AC +L
Sbjct: 174 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 233
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
GRK+H Q + + +++MY + G AR +FD+MP R++ SW AMI+G
Sbjct: 234 ---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
QNG A+++ +M G+ + T SI+ C L + +H +VIK
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
L NALI MY KF + DA R F +M ++
Sbjct: 351 LFVSNALINMYAKFGNLEDA----------------------------RKAFQQMFITDV 382
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWN+IIA + A F +M PD LT+ SL +H +
Sbjct: 383 VSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGF 442
Query: 336 IIKKGFY-SNVPVCNAILQ-----------HQ-------------------------AGE 358
I+++G+ +V + NA++ H+ A E
Sbjct: 443 IMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASE 502
Query: 359 LFRLFSLMLA-SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
++ +M + P+ T+ ++ A A + +L+ G ++H ++KT L LDVFV L+
Sbjct: 503 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLI 562
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
D+Y KCG L A LF + V+W+++I + G E+ LKLF M GV+P+HV
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 622
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T V +L+ACSH G VEEG +R+MQ EYGI P+ + C+VDLL RAG + A DFI
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKD 681
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M D +W +LL +C+ HGN+++GK A++ + ++D N VLL NIYA+ GKWE V
Sbjct: 682 MPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGV 741
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKI 624
++ +ERG++K PG S IE+ K+
Sbjct: 742 DKVRSLARERGLKKTPGWSTIEVNRKV 768
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 258/552 (46%), Gaps = 88/552 (15%)
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+++ K Q + ++N+Y G + +R FD++PQ++V +W +MI+ NG + A
Sbjct: 143 VVAGKVQ-SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEA 201
Query: 166 IELYVQ-MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
I + Q +L S + PD +TF +++AC L GR++H K ++ +LI
Sbjct: 202 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIH 258
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY++F F+ IAR ++F++M ++ SWN +I+G
Sbjct: 259 MYSRFG--------FTGIAR--------------------SLFDDMPFRDMGSWNAMISG 290
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+ NA +A+ + EM + + +TV S+L C + M IH Y+IK G +
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350
Query: 345 VPVCNAILQ--------HQAGELFR----------------------------LFSLMLA 368
+ V NA++ A + F+ F M
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLG 427
+ +PD +T + A + +H +IM+ G L DV + N ++DMY K G L
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTAC 486
SA ++F + DV+SW++LI GYAQ G EA+++++ M + PN T V +L A
Sbjct: 471 SAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530
Query: 487 SHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
+HVG +++G++++ R+++ + +C++D+ + GR+ +A Q+ + V
Sbjct: 531 AHVGALQQGMKIHGRVIKTNLHL--DVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSV 587
Query: 546 VWKSLLASCKTHGNVD-----VGKRAAENILKIDPTNSAALVLLCNI--YASSGKWEEVA 598
W ++++ HG+ + G+ E + K D +L+ C+ + GKW
Sbjct: 588 TWNAIISCHGIHGHAEKTLKLFGEMLDEGV-KPDHVTFVSLLSACSHSGFVEEGKW--CF 644
Query: 599 RLMGSMKERGVR 610
RL M+E G++
Sbjct: 645 RL---MQEYGIK 653
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LH ++ G +F+ L+++Y G + +R F+ + DV +W+S+I Y G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197
Query: 457 GEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EA+ F + + S +RP+ T VL AC G + +G +++ + G
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIH-CWAFKLGFQWNVFVA 253
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++ + +R G A + M F D+ W ++++ +GN
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPF-RDMGSWNAMISGLIQNGN 296
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/566 (30%), Positives = 310/566 (54%), Gaps = 49/566 (8%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+P N +L Y K ++ A +FD MP+R+VVSW M++ SQ+G+ A+++ V
Sbjct: 221 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 280
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ D T+ S + AC+ L + G+QLHA VI++ +AL+ +Y K
Sbjct: 281 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 340
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTV--FNEMESP-------NLASW--- 278
+A VF+S+ ++ +W +I GF + F +V FN+M + LA+
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 400
Query: 279 -----------------------------NTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
N++I+ A C N A ++F M +++++
Sbjct: 401 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIV-- 458
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLA 368
+ S++ A + ++ + + + +K + + A +QH A E R++ +ML+
Sbjct: 459 --SWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 516
Query: 369 SQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ +PD +T+ + CA + + ++G Q+ +K GL +D V N ++ MY KCG +
Sbjct: 517 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 576
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
AR++F+F+ D+VSW+++I GY+Q G G++A+++F + G +P++++ V VL+ CS
Sbjct: 577 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 636
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLV+EG + +M+ + I P E SC+VDLL RAG + EA+D I+ M VW
Sbjct: 637 HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVW 696
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL++CK HGN ++ + AA+++ ++D +S + +L+ IYA +GK ++ A++ M+++
Sbjct: 697 GALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 756
Query: 608 GVRKVPGQSWIEIQTKIHA-SGNDIS 632
G++K PG SW+E+ K+H +D+S
Sbjct: 757 GIKKNPGYSWMEVDNKVHVFKADDVS 782
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 242/546 (44%), Gaps = 88/546 (16%)
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+L P+ + HN +LN Y K G L DA +F MP R+V SW +++G Q+ Q +
Sbjct: 82 LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVS 141
Query: 166 IELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
+E ++ M +SG P+ FT +++C L L QL A V K + AL+
Sbjct: 142 LETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVD 201
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTI 281
M+ + + A +F I + SM+ G+ K +D A +F+ M ++ SWN +
Sbjct: 202 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 261
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
++ ++ EA+ + +M + + D T S L AC SL G Q+H+ +I+
Sbjct: 262 VSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLP 321
Query: 342 YSNVPVCNAILQHQAG------------------------------------ELFRLFSL 365
+ + V +A+++ A E LF+
Sbjct: 322 HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQ 381
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
M A D ++ C + L +G QLH +K+G V V N L+ MY KC +
Sbjct: 382 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDN 441
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQF------------------------------- 454
L SA +F FM + D+VSW+S+I Y+Q
Sbjct: 442 LQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQH 501
Query: 455 GCGEEALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTR 512
G E+ L++++ M S VRP+ VT V + C+ +G + G Q+ R ++ G+I
Sbjct: 502 GAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK--VGLIIDT 559
Query: 513 ERRSCVVDLLARAGRVHEAE---DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE- 568
+ V+ + ++ GR+ EA DF+N DIV W +++ HG +GK+A E
Sbjct: 560 SVANAVITMYSKCGRILEARKVFDFLNV----KDIVSWNAMITGYSQHG---MGKQAIEI 612
Query: 569 --NILK 572
+ILK
Sbjct: 613 FDDILK 618
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF-M 436
F D + +C A +L LH ++ GLA VF+ N L+ Y+ CG+L AR L +
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRM----------------------------- 467
P+V++ + ++ GYA+ G +A++LF RM
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146
Query: 468 ---RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RS PN TL + +C +G LQL ++Q ++ E + +VD+ R
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ-KFDSQDDSEVAAALVDMFVR 205
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLAS-CKTHGNVDVGKRAAENILKIDPTNSAALVL 583
G V A ++ + + S+LA KT+G VD A E + + + +
Sbjct: 206 CGAVDLASRLFVRIK-EPTMFCRNSMLAGYVKTYG-VD---HALELFDSMPERDVVSWNM 260
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVR 610
+ + + SG+ E ++ M+ +GVR
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVR 287
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/580 (30%), Positives = 294/580 (50%), Gaps = 99/580 (17%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF---- 138
Y+ LIS C + R L+LG+ +H H + + L N +++ Y KC S++ A VF
Sbjct: 17 YSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLP 76
Query: 139 ---------------------------DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
D+MP+ N+VS+ ++I+G +G ++ ++
Sbjct: 77 VKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKT 136
Query: 172 MLQ--SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
ML+ S ++ D+FT S++ +C+ L L RQ+H I S++I NALI Y K
Sbjct: 137 MLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKC 196
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ D + ++F+ M ++ SW +++A A S
Sbjct: 197 ----------------------------GEPDISFSIFSRMPERDVVSWTSMVAAYAQAS 228
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+A LFS+M ++ + + T+ ++ GF N
Sbjct: 229 RLEDAHWLFSQMQEKNTV-----------SWTALIA--------------GFAQN----- 258
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT---GL 406
+ E LF M P TF V+ ACA +A + G ++H +I+++
Sbjct: 259 ----GRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDY 314
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
++F++N L+DMY KCG + SA LF M + D+VSW+SLI G+AQ G GEE+L +F R
Sbjct: 315 FCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFER 374
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M + +RPNHVT +G+L+AC H GLV EGL++ M+ +YG+ P + + ++DLL R
Sbjct: 375 MIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNN 434
Query: 527 RVHEAEDFINQMAFDDDIV-VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
R+ EA I + D V +W +LL +C+ HGN+D+ +RAAE + +++P N+A V++
Sbjct: 435 RLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVY 494
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA++ +W+E ++ M ERG+RK SWIE++ H
Sbjct: 495 NIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRH 534
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 199/454 (43%), Gaps = 64/454 (14%)
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
S L P + S+I C + LG+ LH+H IK+ N LI Y+K D I
Sbjct: 8 SSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQS 67
Query: 235 AWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
A VF + K+ SW +I +S+ + A + ++M PNL S+N++I+G+
Sbjct: 68 AHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFR 127
Query: 292 NEAMSLFSEMGDR--ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
E++++F M + ++ D T+ SL+ +C S + Q+H I G SN+ + N
Sbjct: 128 KESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGN 187
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
A++ D G C + I D
Sbjct: 188 ALI---------------------------DAYGKCGE-------PDISFSIFSRMPERD 213
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V ++ Y + L A LF+ M++ + VSW++LI G+AQ G G+EAL LF +MR
Sbjct: 214 VVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMRE 273
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV----------- 518
G+ P+ T VL+AC+ + L+ G ++ +G I R +C+
Sbjct: 274 EGIPPSAFTFASVLSACADLALIARGKEI-------HGHII---RSTCIDYFCNIFILNA 323
Query: 519 -VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PT 576
+D+ + G++ A M + DIV W SL+ +G+ + E +++ D
Sbjct: 324 LIDMYCKCGQMRSATTLFKGM-HEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRP 382
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSM-KERGV 609
N + L + +G E R++ SM K+ GV
Sbjct: 383 NHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGV 416
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 176/388 (45%), Gaps = 71/388 (18%)
Query: 50 LFSSLCKQNLYNEALVAFD-FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
L S L E+L F L+ +N T L+ +C+SL + +L R+VH +
Sbjct: 117 LISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAII 176
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM---------------- 152
+ ++ N +++ YGKCG + + +F MP+R+VVSWT+M
Sbjct: 177 IGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWL 236
Query: 153 ---------------IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
IAG +QNG+ + A+ L+ QM + G+ P FTF S++ AC+ L +
Sbjct: 237 FSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALI 296
Query: 198 GLGRQLHAHVIKS---EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
G+++H H+I+S ++ ++ NALI MY K ++ A +F + KDI SW S+I
Sbjct: 297 ARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLI 356
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
GF A + E++++F M + ++ P+ +T
Sbjct: 357 TGF----------------------------AQNGHGEESLAVFERMIEADIRPNHVTFL 388
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN--AILQHQAGELFRLFSLMLASQTK 372
LL AC + +G++I + K Y P + AI+ G RL M +
Sbjct: 389 GLLSACCHTGLVSEGLRILDSMEKD--YGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRA 446
Query: 373 P---DHI-TFNDVMGACAAMASLEMGTQ 396
P DH+ + ++GAC ++++ +
Sbjct: 447 PKGSDHVGMWGALLGACRIHGNMDLARR 474
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 139/274 (50%), Gaps = 23/274 (8%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
L + + +EAL F+ ++ I PS T+A ++SAC+ L + G+++H HI+
Sbjct: 251 LIAGFAQNGRGDEALHLFEQMREEG---IPPSAFTFASVLSACADLALIARGKEIHGHII 307
Query: 108 SSKCQP---DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
S C + + N +++MY KCG + A +F M ++++VSW ++I G +QNG
Sbjct: 308 RSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEE 367
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGLGRQLHAHVIKSEHGSHLISQN-- 220
++ ++ +M+++ + P+ TF ++ AC +GL GL R L + ++ ++G S +
Sbjct: 368 SLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGL-RILDS--MEKDYGVCPRSDHYA 424
Query: 221 ALIAMYTKFDRILDAWNVFSSIAR--KDITSWGSMIDG---FSKLDFAR---TVFNEMES 272
+I + + +R+ +A + + + WG+++ +D AR V ++E
Sbjct: 425 IMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEP 484
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
N A + + A+ S +EA + M +R L
Sbjct: 485 GNAARYVMVYNIYAAASRWDEARQVRRLMMERGL 518
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 305/615 (49%), Gaps = 93/615 (15%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQ----LGRKVHD 104
D FS CK N + V FD + TY ++S C R ++ +G ++H
Sbjct: 145 DAFSFACKMN---SSGVVFDAV-----------TYTTVLSFC--WRHVEAYFLIGLQLHS 188
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN- 163
I+ + + N +++MY + G L +AR VF+EM R++VSW AMI+G SQ G
Sbjct: 189 CIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGL 248
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
AI +++QM + G+ D+ +F S + AC + L RQ+H IK+ H H+ N LI
Sbjct: 249 EAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLI 308
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
+ Y K I DA R VF M N+ SW T+I+
Sbjct: 309 STYFKCQVIEDA----------------------------RLVFQNMNERNVVSWTTMIS 340
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
+ EA+S F+EM + P+ +T L+ A T + QG +H + K GF S
Sbjct: 341 -----IDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSS 395
Query: 344 NVPVCNAILQHQAG------------------------------------ELFRLFSLML 367
VCN+I+ A E R F L
Sbjct: 396 KSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGL 455
Query: 368 ASQTKPDHITFNDVMGACAAM--ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
++KP+ +F ++ A A SL+ G + H I+K GL D V + L+DMY K GS
Sbjct: 456 I-ESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGS 514
Query: 426 LGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
+ ++++F +W+++I YA+ G E + F MR VRP+ +T + +LTA
Sbjct: 515 ICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTA 574
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C G+V+ G L+ M +Y I P+ E SC+VD+L RAGR+ EAE ++ + +
Sbjct: 575 CGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLS 634
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
V +SLL +C+ HGNVD+G+R A+ +++++PT S + VL+ N+YA GKWE VA++ M+
Sbjct: 635 VLQSLLGACRVHGNVDMGERVADALMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRKRMR 694
Query: 606 ERGVRKVPGQSWIEI 620
+GV+K G SW+++
Sbjct: 695 VKGVKKEVGFSWVDV 709
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 192/468 (41%), Gaps = 101/468 (21%)
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP--DQFTF 184
K G A + D+ P RN+ + ++ + L SG + D+FT
Sbjct: 28 KTGESSHAHNLLDKTPHRNL------------------SFQIIKEHLLSGFINNIDEFTV 69
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+ ++AC G LG Q+H I E + I N+L+ MY K + A +F ++
Sbjct: 70 ANALKACRGYPL--LGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTH 127
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
P++ SWNT+++G C + +A S +M
Sbjct: 128 ----------------------------PDIVSWNTVLSG---CQTSEDAFSFACKMNSS 156
Query: 305 ELIPDGLTVRSLLCACTSPLSLY--QGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
++ D +T ++L C + Y G+Q+HS I+K GF V V NA++
Sbjct: 157 GVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLV 216
Query: 354 ------------------------HQAG----ELFRLFSLMLASQTKPDHITFNDVMGAC 385
Q G E +F M + D I+F + AC
Sbjct: 217 EARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSAC 276
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
+LE+ Q+H +KT V V N L+ Y KC + AR +F M + +VVSW+
Sbjct: 277 GYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWT 336
Query: 446 SLI-VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
++I + A EA+ F MR GV PN VT VG++ A + LV +G ++
Sbjct: 337 TMISIDEA------EAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFC-T 389
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ G + ++ + A+ + ++ ++ + DI+ W +L++
Sbjct: 390 KTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKY-QDIIAWNALIS 436
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 9/187 (4%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D T + + AC L G+Q+H + + V N LM+MY K G A +F
Sbjct: 65 DEFTVANALKACRGYPLL--GSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIF 122
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC-SHV-GL 491
+ PD+VSW++++ G E+A +M SSGV + VT VL+ C HV
Sbjct: 123 ENLTHPDIVSWNTVLSGCQT---SEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAY 179
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
GLQL+ + ++G + ++ + +R G + EA +M D+V W +++
Sbjct: 180 FLIGLQLHSCIV-KFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMK-TRDLVSWNAMI 237
Query: 552 ASCKTHG 558
+ G
Sbjct: 238 SGYSQEG 244
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/627 (29%), Positives = 312/627 (49%), Gaps = 78/627 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC--SSLRSLQLGRKVHDHIL 107
+ S+ + EAL F + + T+ ++ +C + L SL+ R +H I+
Sbjct: 216 MISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIV 275
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVF----DEMPQRNVVSWTAMIAGCSQNGQEN 163
+ + +A + +++ YGK GSL+DA VF DE P ++V+ +AMI+ C QNG
Sbjct: 276 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQ 335
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
++ L+ M G P T S++ ACS +++ + + + A+
Sbjct: 336 ESLRLFFAMNLEGTKPSGVTLVSVLNACS--------------MLQVGSATAFVLEQAME 381
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
+ D +L + ++ AR + L AR F+ ++SP++ SWN + A
Sbjct: 382 VVSATRDNVLGT-TLLTTYARSN------------DLPRARATFDAIQSPDVVSWNAMAA 428
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS--PLSLYQ-GMQIHSYIIKKG 340
+ EA+ LF M + P T + L AC + P + G +I S + + G
Sbjct: 429 AYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAG 488
Query: 341 FYSNVPVCNAIL-------------------------------------QHQAG-ELFRL 362
+ V NA L H G E F L
Sbjct: 489 LEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFEL 548
Query: 363 FSLMLASQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F M A + KP+ +TF V+ A + S+ G ++H ++ G D + N L++MY
Sbjct: 549 FQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYA 608
Query: 422 KCGSLGSARELFN--FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
KCGSL A+ +F+ DV++W+SLI GYAQ+G E ALKLF M+ GVRPNHVT
Sbjct: 609 KCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTF 668
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+ LTAC+H G +E+G +L M ++GI+P + SC+VDLL R GR+ EAE + + +
Sbjct: 669 ISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS 728
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
D++ W +LL +CK ++ G+R AE I+++DP +++ ++L ++YA++G+W E A
Sbjct: 729 -QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAAT 787
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ +M ++G+R PG S +E+ ++H+
Sbjct: 788 IRKTMLDKGIRADPGCSAVEVNQELHS 814
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 246/549 (44%), Gaps = 104/549 (18%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH------ILNMYGKCGSLED 133
PSTY L+ AC LR+L+ G+++H HILS + LHNH ++ M+ KCG+L +
Sbjct: 43 PSTYGCLLQACGRLRALKQGQRLHAHILSRRID----LHNHSFLASDLIVMHAKCGNLAE 98
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A + D +V S TAMI ++G+ + A+EL+ +M + P+ +++ ACS
Sbjct: 99 AEALADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSC 153
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR---KDITSW 250
L + GR++H+ + + + + NALI+MY+K ++DA F + R +D+ +W
Sbjct: 154 LGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTW 213
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG-DRELIPD 309
+MI F + AR EA+ LF +M D P+
Sbjct: 214 NAMISAFLRNGSAR----------------------------EALQLFRDMDRDGAPPPN 245
Query: 310 GLTVRSLLCACTSP--LSLYQGMQIHSYIIKKGF-------------------------- 341
+T S+L +C LSL IH I+ G
Sbjct: 246 SVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEV 305
Query: 342 ---------YSNVPVCNAILQH--QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAA 387
+++ C+A++ Q G E RLF M TKP +T V+ AC+
Sbjct: 306 FLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSM 365
Query: 388 MASLEMGTQLHCYIMKTGLAL-----DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
L++G+ ++++ + + D + L+ Y + L AR F+ ++ PDVV
Sbjct: 366 ---LQVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVV 421
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI- 501
SW+++ Y Q EAL LF RM GVRP+ T + LTAC+ RI
Sbjct: 422 SWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQ 481
Query: 502 -MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA-FDDDIVVWKSLLASCKTHGN 559
+ E G+ + +++ A+ G + +A +++ D + W S+LA+ HG
Sbjct: 482 SLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHG- 540
Query: 560 VDVGKRAAE 568
+GK A E
Sbjct: 541 --LGKEAFE 547
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 191/477 (40%), Gaps = 92/477 (19%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNFRIRPST 82
LD A EV FLR+ D+ L + S C QN + + + F N + T
Sbjct: 299 LDDAWEV---FLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVT 355
Query: 83 YADLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+++ACS L+ V + + D VL +L Y + L AR FD +
Sbjct: 356 LVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAI 415
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL---CCVG 198
+VVSW AM A Q+ + A+ L+ +ML G+ P TF + + AC+
Sbjct: 416 QSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASA 475
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI--ARKDITSWGSMIDG 256
+G+++ + + ++ NA + MY K + DA VF I AR+D +W SM+
Sbjct: 476 IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAA 535
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRS 315
+ + EA LF M +L+ P+ +T +
Sbjct: 536 YGHHGLGK----------------------------EAFELFQAMEAEKLVKPNKVTFVA 567
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------- 353
+L A TS S+ QG +IH+ ++ GF S+ + NA+L
Sbjct: 568 VLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQ 627
Query: 354 ----------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
QA +LF M +P+H+TF + AC LE G +L
Sbjct: 628 EDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCEL 687
Query: 398 HCYIMKTGLALDVFVMNG------LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+G+ D ++ ++D+ +CG L A +L DV++W +L+
Sbjct: 688 -----LSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 739
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL--DVFVMNG 415
+L S ++A Q T+ ++ AC + +L+ G +LH +I+ + L F+ +
Sbjct: 26 DLTAAVSRIIADQGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASD 85
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+ M+ KCG+L A L + V S +++I + + G ++A++LF RM VRPN
Sbjct: 86 LIVMHAKCGNLAEAEALADRF--ASVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPN 140
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQN----EYGIIPTRERRSCVVDLLARAGRVHEA 531
L+ ++ ACS +G + G +++ + + E ++ + ++ + ++ G + +A
Sbjct: 141 CHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLG-----NALISMYSKCGSLIDA 195
Query: 532 EDFINQM--AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-----PTNSAALVLL 584
+ +++ A D+V W +++++ +G+ + A + +D P NS V +
Sbjct: 196 KQAFDRLPRASKRDVVTWNAMISAFLRNGS---AREALQLFRDMDRDGAPPPNSVTFVSV 252
Query: 585 CNIYASSG--KWEEVARLMGSMKERGVRK 611
+ +G E+V + G + G+ +
Sbjct: 253 LDSCVEAGLLSLEDVRAIHGRIVGAGIER 281
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 319/638 (50%), Gaps = 70/638 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L+ A +V + R W + S + EA V F L + + ++A
Sbjct: 200 CGSLELARKVFNEMRERNVVSWT-AMISGYVQHGDSKEAFVLFQKLIR-SGTQPNKVSFA 257
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ AC++ L+ G K+H +I + + + ++ N +++MY +CGSL +AR VFD +
Sbjct: 258 SILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSP 317
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N VSW AMIAG + E A L+ M Q G PD+FT+ S++ C+ + G++LH
Sbjct: 318 NRVSWNAMIAGYGEGFMEEA-FRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELH 376
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ ++++ + + ALI+MY K L+ AR
Sbjct: 377 SQIVRTAWEADVTVATALISMYAKC----------------------------GSLEEAR 408
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VFN+M N SWN IA + EA +F +M ++IPD +T +LL +CTSP
Sbjct: 409 KVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPE 468
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------------------------------- 352
+G IH I + G SN V NA++
Sbjct: 469 DFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIA 528
Query: 353 ---QHQA-GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
QH A G F LF + K D TF +V+ A A + L+ G ++H + K GL
Sbjct: 529 AYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEK 588
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ ++ L+ MY KCGSL A +F +++ DVV W++++ Y G++ALKLF++MR
Sbjct: 589 DIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMR 648
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
GV P+ T VL AC+ +G +E G + + ++ TR +C+V L RA +
Sbjct: 649 LEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRH-YACMVAALGRASLL 707
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNI 587
EAE+FI +++ + D ++W+SLL +C+ H NV + + A E++L + +S A+ L NI
Sbjct: 708 KEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCEQLMNI 767
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
YA++G+WE+V+ + +M+E G+ P IE+ ++ H
Sbjct: 768 YAAAGRWEDVSVIKATMREAGLL-APKSCTIEVNSEFH 804
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/524 (30%), Positives = 265/524 (50%), Gaps = 71/524 (13%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
+Q N NF YA + C +SL G+KVHDH+ S++ +PD L+N +++MY KCG
Sbjct: 47 VQANLNF------YARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCG 100
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
S+EDA VF M ++VVSW AMI+G + +G+ A++L+ QM + GL P+Q +F SI+
Sbjct: 101 SIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILS 160
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
AC + G Q+H+H+ K+ + S + ALI MY K + A VF+ + +++ S
Sbjct: 161 ACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVS 220
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
W +MI G+ + ++ EA LF ++ P+
Sbjct: 221 WTAMISGYVQH----------------------------GDSKEAFVLFQKLIRSGTQPN 252
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------- 356
++ S+L ACT+P L QG+++H+YI + G V V NA++ A
Sbjct: 253 KVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFD 312
Query: 357 ----------------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
E FRLF M +PD T+ ++ CA A L G
Sbjct: 313 NLRSPNRVSWNAMIAGYGEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRG 372
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+LH I++T DV V L+ MY KCGSL AR++FN M + + VSW++ I +
Sbjct: 373 KELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRH 432
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G +EA ++F++MR V P+HVT + +L +C+ E G ++ + +++G++
Sbjct: 433 GSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKI-DQWGMLSNNLV 491
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++ + R G++ +A + ++ D+ W +++A+ HG
Sbjct: 492 ANALISMYGRCGKLADAREVFYRIR-RRDLGSWNAMIAAYVQHG 534
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 288/575 (50%), Gaps = 63/575 (10%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ AC SL +L G ++H ++ D + +++MY +CG L A V+ + ++
Sbjct: 185 ILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKD 244
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V MI+ + G AI +++ +L SGL P+ +TF ++I AC+G V + R LH
Sbjct: 245 VRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHG 304
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
IK G + NA++++Y K + +A F + +
Sbjct: 305 MCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGER-------------------- 344
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
NL SW +++G N +A+ FS++ + + D +LL C+ +
Sbjct: 345 --------NLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKN 396
Query: 326 LYQGMQIHSYIIKKGFYSNVPVC-------------------------------NAILQH 354
L G+QIH +++K G+ +V V NAIL
Sbjct: 397 LGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSG 456
Query: 355 QAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
G + LFS + + KPD +TF ++ A A L G LH YI+KTG +
Sbjct: 457 YIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANP 516
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V N ++ MY KCGS+G A +LF M D +SW+++I YA G G +AL LF M+
Sbjct: 517 SVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKE 576
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
P+ +T++ VL ACS+ GL+EEG L+ M+++YGI P E +C+VDLL RAG + E
Sbjct: 577 EFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSE 636
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A FIN+ F ++W++L+ CK HG+++ G+ A++++L + P + + +L+ N+YA
Sbjct: 637 AMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAG 696
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
G E AR+ M + V K G SWIEI K+H
Sbjct: 697 GGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVH 731
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L +G +H ++ K G D F N L+++Y K LG A+ +F+ M + ++W++LI G
Sbjct: 94 LMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKG 153
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
+ Q E ++ R M G N T +L AC + + G Q++ + G
Sbjct: 154 HLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKR-GFDE 212
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
+ ++ + +R G + AE + +A+ D
Sbjct: 213 DVFVGTSLISMYSRCGDLGAAEKVYSNLAYKD 244
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/624 (30%), Positives = 307/624 (49%), Gaps = 102/624 (16%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
T F ++ ++ +C + + L G+ +H L S L NH + +Y KC L
Sbjct: 2 TQFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTT 61
Query: 134 ARM-------------------------------VFDEMPQRNVVSWTAMIAGCSQNGQE 162
A +FD++PQ ++VS+ +I + G
Sbjct: 62 AHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDT 121
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
+A+ L+ +M + GL+ D FTF +I AC VGL RQLH+ S S++ +N+L
Sbjct: 122 LSALSLFGEMREMGLVMDGFTFSGVITACCNH--VGLIRQLHSLAFSSGFDSYVSVKNSL 179
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM--ESPNLASWNT 280
+ Y+K +G L+ A VFN M E + SWN+
Sbjct: 180 LTYYSK--------------------------NGI--LEEAEMVFNGMGEEVRDEVSWNS 211
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I +A++L+ +M R D T+ S+L + L G+Q H+ IK G
Sbjct: 212 MIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTG 271
Query: 341 FYSNVPV----------CNA-------ILQHQAGELFRLFSLMLA--SQTK--------- 372
F N V C A + + G +++ M++ SQ K
Sbjct: 272 FNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALEC 331
Query: 373 ----------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYV 421
PD +F + AC+ ++S G Q H MK+ + + + V N L+ MY
Sbjct: 332 FRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYS 391
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG+L AR+LF M + V+ +S+I GYAQ G G E+L LF +M ++ + P +TLV
Sbjct: 392 KCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVS 451
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
+L+AC+H G VEEG + + +M++ +GI P E SC++DLL RAG++ EAE I+ M F
Sbjct: 452 ILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFS 511
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
W +LL +C+ +GN+++ ++AA L+++PTN+ ++L ++Y+++ KWEE AR+
Sbjct: 512 PGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIR 571
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
M++RG+RK PG SWIE+ ++H
Sbjct: 572 KLMRDRGIRKKPGCSWIELNKRVH 595
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 288/575 (50%), Gaps = 71/575 (12%)
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
R +G ++ L S + + +L++Y KCG + DAR VFD MP+RN VSW A+I
Sbjct: 107 RRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALI 166
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
AG +++G +A+EL+++M + GL+PD+ TF S++ A G C L QLH ++K
Sbjct: 167 AGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSA 225
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMIDGFSKLDFARTVFNEMES 272
L NA I Y++ + D+ +F I +D+ SW +M+ ++ N M+
Sbjct: 226 LGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTH--------NGMD- 276
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTS-PLSLYQGM 330
+EAM F M + PD + S++ +C+ +QG
Sbjct: 277 -------------------DEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGR 317
Query: 331 QIHSYIIKKGFYSNVPVCNAIL-------------------------------------- 352
IH +IK PVCNA++
Sbjct: 318 VIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYS 377
Query: 353 QHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
QH + + + F M + + D F+ + + + +A L++G Q+H ++ +G A + F
Sbjct: 378 QHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDF 437
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L+ MY K G + AR+ F + V W+++I GYAQ G E LF M
Sbjct: 438 VSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRK 497
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+H+T VG++T+CSH GLV+EG ++ M+ +YG+ E +C VDL RAG++ +A
Sbjct: 498 APLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKA 557
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
+ I+ M F+ D +VW +LL +C+ HGNV++ A ++ +P + VLL ++Y+
Sbjct: 558 KKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGL 617
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
G W + A + MK+RG+ KVPG S IE++ ++H+
Sbjct: 618 GMWSDRATVQRVMKKRGLSKVPGWSLIEVKNEVHS 652
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 234/536 (43%), Gaps = 80/536 (14%)
Query: 119 NHILNMYGKCG--SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
N +L Y + L AR VFDE+P+R+ VSW A++A + +G A L M G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQG 88
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
L + F GS +R+ + +G QL + +KS +++ + +AL+ +Y K R+ DA
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF + ++ SW ++I G++ ES ++AS A+
Sbjct: 149 QVFDGMPERNTVSWNALIAGYT------------ESGDMAS----------------ALE 180
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--H 354
LF EM L+PD T SLL A P S + Q+H I+K G + V NA +
Sbjct: 181 LFLEMEREGLVPDEATFASLLTAVEGP-SCFLMHQLHGKIVKYGSALGLTVLNAAITAYS 239
Query: 355 QAGEL---FRLFS---------------------------------LMLASQTKPDHITF 378
Q G L R+F +M S PD +F
Sbjct: 240 QCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSF 299
Query: 379 NDVMGACAAMASLE-MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS---LGSARELFN 434
++ +C+ + G +H ++K+ L V N L+ MY + + A + FN
Sbjct: 300 TSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFN 359
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ D VSW+S++ GY+Q G +ALK FR M S VR + L + S + +++
Sbjct: 360 SLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQL 419
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G Q++ ++ + G S ++ + +++G + +A + A V W +++
Sbjct: 420 GKQIHGLVIHS-GFASNDFVSSSLIFMYSKSGIIDDARKSFEE-ADKSSSVPWNAMIFGY 477
Query: 555 KTHG---NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
HG NVD+ E + + P + V L + +G +E + ++ +M+ +
Sbjct: 478 AQHGQAENVDI--LFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETK 531
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 35/326 (10%)
Query: 23 ELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPST 82
E CM+ D A + +S + + W+ + + + L +AL F + + N R
Sbjct: 347 ENCMMED-AYKCFNSLVLKDTVSWN-SMLTGYSQHGLSADALKFFRCMCSE-NVRTDEYA 403
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ + + S L LQLG+++H ++ S + + + ++ MY K G ++DAR F+E
Sbjct: 404 FSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEAD 463
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+ + V W AMI G +Q+GQ L+ +MLQ D TF +I +CS
Sbjct: 464 KSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCS---------- 513
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS-KLD 261
HA ++ + GS +++ M TK+ L R + + G + G + +LD
Sbjct: 514 -HAGLV--DEGSEILN-----TMETKYGVPL----------RMEHYACGVDLYGRAGQLD 555
Query: 262 FARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A+ + + M P+ W T++ N A + S + E P + LL +
Sbjct: 556 KAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAE--PRQHSTYVLLSSM 613
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVP 346
S L ++ ++KK S VP
Sbjct: 614 YSGLGMWSDRATVQRVMKKRGLSKVP 639
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/565 (30%), Positives = 315/565 (55%), Gaps = 47/565 (8%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
P + N +L Y K ++ A +F MP+R+VVSW +I+ S++G+ A+++ V
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVD 281
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ PD T+ S + AC+ L + G+QLH VI++ +A++ +Y K
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLD-FARTV--FNEMESPNLA----SWNTIIAG 284
+A VFSS+ ++ SW +I GF + F+ +V FN+M + +A + T+I+G
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401
Query: 285 VASCSN----------------------ANEAMSLFSEMG---DRELIPDGLTVRSLLCA 319
+ + +N +S++++ G + ELI + + R ++ +
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIV-S 460
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI---------LQHQAGE-LFRLFSLMLAS 369
T ++ Y Q+ + + F+ ++ N I +QH A E +++S ML
Sbjct: 461 WTGMITAYS--QVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTE 518
Query: 370 Q-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ PD +T+ + CA + + ++G Q+ + +K GL LD V+N ++ MY KCG +
Sbjct: 519 KDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISE 578
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
AR+ F+F+ D+VSW+++I GY+Q G G++A+++F + + G +P++++ V VL+ CSH
Sbjct: 579 ARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSH 638
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLVEEG + +M+ ++ I P E SC+VDLL RAG + EA++ I++M VW
Sbjct: 639 SGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWG 698
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL++CKTHGN D+ + AA+++ +D S +LL +YA +GK ++ A++ M+++G
Sbjct: 699 ALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKG 758
Query: 609 VRKVPGQSWIEIQTKIHA-SGNDIS 632
++K PG SW+E+ ++H D+S
Sbjct: 759 IKKSPGYSWMEVNNRVHVFKAEDVS 783
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 161/589 (27%), Positives = 258/589 (43%), Gaps = 106/589 (17%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV-HDHILSSKCQPDAVL 117
L N L + FLQN L+ A S +L R + D I +P+ +
Sbjct: 51 LINVGLASVVFLQNT------------LLHAYLSCGALSDARNLLRDEI----TEPNVIT 94
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG- 176
HN ++N Y K GSL DA +F MP R+V SW +++G Q+GQ A++++V M Q+G
Sbjct: 95 HNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGD 154
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+P+ FTFG ++++C L + QL + K + Q AL+ M + + A
Sbjct: 155 SLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFAS 214
Query: 237 NVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
FS I I SM+ G++K +D A +F M ++ SWN +I+ ++ E
Sbjct: 215 KQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVRE 274
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
A+ + +M + + PD T S L AC SL G Q+H +I+ + + V +A+++
Sbjct: 275 ALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVE 334
Query: 354 HQA------------------------------------GELFRLFSLMLASQTKPDHIT 377
A E LF+ M A D
Sbjct: 335 LYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFA 394
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
++ C + +G+QLH +K+G V V N L+ MY KCG+L +A +FNFM
Sbjct: 395 LATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMA 454
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ D+VSW+ +I Y+Q G +A + F M + V +T +L A G E+GL+
Sbjct: 455 ERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNV----ITWNAMLGAYIQHGAEEDGLK 510
Query: 498 LYRIMQNEYGIIP-----TRERRSC------------------------------VVDLL 522
+Y M E +IP R C V+ +
Sbjct: 511 MYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMY 570
Query: 523 ARAGRVHEAE---DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
++ GR+ EA DF+++ D+V W +++ HG +GK+A E
Sbjct: 571 SKCGRISEARKAFDFLSR----KDLVSWNAMITGYSQHG---MGKQAIE 612
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 176/412 (42%), Gaps = 55/412 (13%)
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF-SSIARKD 246
+R+C + R LH+ +I S + QN L+ Y + DA N+ I +
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 247 ITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-- 301
+ + M++G++KL A +F M + ++ASWNTI++G A+ +F M
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 302 -GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ-AGEL 359
GD +P+ T F + C A+ H+ A +L
Sbjct: 152 TGDS--LPNAFT----------------------------FGCVMKSCGALGWHEVALQL 181
Query: 360 FRLFSLMLASQTKPD-HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
L S SQ PD D++ C AM + ++ I + N ++
Sbjct: 182 LGLLS-KFDSQDDPDVQTALVDMLVRCGAM---DFASKQFSRIKNP----TIICRNSMLV 233
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
Y K + A E+F M + DVVSW+ +I ++ G EAL + M GVRP+ T
Sbjct: 234 GYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTT 293
Query: 479 LVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
LTAC+ + +E G QL+ ++++N I P S +V+L A+ G EA+ +
Sbjct: 294 YTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVA--SAMVELYAKCGCFKEAKRVFSS 351
Query: 538 MAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLLC 585
+ D + V W L+ +G +V++ + ++ +D A L+ C
Sbjct: 352 LR-DRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGC 402
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L C+ + + +LG ++ H + D + N ++ MY KCG + +AR FD +
Sbjct: 527 TYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFL 586
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++++VSW AMI G SQ+G AIE++ +L G PD ++ +++ CS V G+
Sbjct: 587 SRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGK 646
Query: 202 QLHAHVIKSEH--GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMI 254
+ ++K +H L + ++ + + +++A N+ + K WG+++
Sbjct: 647 -FYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALL 701
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 38/264 (14%)
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR--------- 430
D + +C A ++L LH ++ GLA VF+ N L+ Y+ CG+L AR
Sbjct: 30 DALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITE 89
Query: 431 -----------------------ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
ELF M DV SW++++ GY Q G AL +F M
Sbjct: 90 PNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSM 149
Query: 468 RSSGVR-PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
R +G PN T V+ +C +G E LQL ++ +++ + ++ +VD+L R G
Sbjct: 150 RQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLL-SKFDSQDDPDVQTALVDMLVRCG 208
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ A +++ I L+ K+HG VD A E + + + ++ +
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHG-VD---HALEIFKSMPERDVVSWNMVIS 264
Query: 587 IYASSGKWEEVARLMGSMKERGVR 610
+ SG+ E ++ M +GVR
Sbjct: 265 ALSKSGRVREALDMVVDMHGKGVR 288
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 247/461 (53%), Gaps = 69/461 (14%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-GSHLISQNALIAMYTKFD 230
M+ +G PD+ T S++ AC+GL GRQ+HAH++K + ++ NAL+ MY K
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
R W AR +F+ M S ++ S +I+AG A +N
Sbjct: 61 R---TWE-------------------------ARCIFDSMPSRSVVSETSILAGYAKSAN 92
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
+A +FS+M ++ +I NV +
Sbjct: 93 VEDAQVVFSQMVEKNVIA----------------------------------WNVLIAAY 118
Query: 351 ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD- 409
+ E RLF + P H T+ +V+ AC +A L++G Q H +++K G D
Sbjct: 119 AQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDF 178
Query: 410 -----VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
VFV N L+DMY+K GS+ ++F M D VSW+++IVGYAQ G ++AL LF
Sbjct: 179 GPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLF 238
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM S P+ VT++GVL+AC H GLV+EG + + M ++GI P+R+ +C+VDLL R
Sbjct: 239 ERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGR 298
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + EAE+ I M + D V+W SLL +C+ H NV++G+R A + ++DP NS VLL
Sbjct: 299 AGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLL 358
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+YA GKW +V R+ SMK+RGV K PG SWIEI +K++
Sbjct: 359 SNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMN 399
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 164/368 (44%), Gaps = 77/368 (20%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS-SKCQPDAVLHNHILNMYGKCGSLE 132
T F T + ++SAC+ L + + GR+VH H++ + + D VL+N +++MY KCG
Sbjct: 4 TGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTW 63
Query: 133 DARMVFDEMPQR-------------------------------NVVSWTAMIAGCSQNGQ 161
+AR +FD MP R NV++W +IA +QNG+
Sbjct: 64 EARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGE 123
Query: 162 ENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS----EHG--SH 215
E AI L+VQ+ + + P +T+G+++ AC + + LG+Q H HV+K + G S
Sbjct: 124 EEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESD 183
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ N+L+ MY K I D VF +A +D SW
Sbjct: 184 VFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSW------------------------- 218
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG------ 329
N +I G A A +A+ LF M PD +T+ +L AC + +G
Sbjct: 219 ---NAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHF 275
Query: 330 -MQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAM 388
+ H + Y+ C L +AG L L+ T+PD + + ++GAC
Sbjct: 276 MTEDHGITPSRDHYT----CMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH 331
Query: 389 ASLEMGTQ 396
++E+G +
Sbjct: 332 KNVELGER 339
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 255/455 (56%), Gaps = 62/455 (13%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M+ G+ P+QFT ++++AC+ + + G+Q H ++IK S ++ Q AL+ MY +
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ DA +VF ++M + +WN +I G A +
Sbjct: 61 LEDAGHVF----------------------------DKMSERSTRTWNAMITGHAQNRDM 92
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
+A+ LF EM +R+++ + T+ ++ Y + G+
Sbjct: 93 KKALKLFYEMSERDVV-----------SWTAVIAGYA---------QNGY---------- 122
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
E +F+ M + K D V+ ACA +A+LE+G Q H Y++++G ALD+
Sbjct: 123 ----GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIV 178
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V + L+DMY K GS+ A ++F+ M + VSW+S+I G AQ G G +A+ LF +M +G
Sbjct: 179 VGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG 238
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
++PN ++ VGVL+ACSH GLV EG + +M YGI+P +C++DLL RAG + EA
Sbjct: 239 IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEA 298
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
E+FIN M + D+ VW +LL +C+ HGN ++ KR AE++L ++ + VLL NIYA++
Sbjct: 299 ENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAA 358
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
G+W++ A++ MK+RGV K PG SWIE++T +HA
Sbjct: 359 GQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHA 393
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 215/454 (47%), Gaps = 89/454 (19%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P+ T + ++ AC+S+ SL+ G++ H++I+ + D V+ +++MY +CGSLEDA
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 136 MVFD-------------------------------EMPQRNVVSWTAMIAGCSQNGQENA 164
VFD EM +R+VVSWTA+IAG +QNG +
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
++ ++ QM ++G+ D+F GS++ AC+ L + LGRQ HA+V++S ++ +AL+
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVD 185
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY K + DA VF + ++ NE+ SWN+II G
Sbjct: 186 MYAKSGSMEDACQVFDKMPQR----------------------NEV------SWNSIITG 217
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
A N+A+ LF +M + P+ ++ +L AC+ + +G + + + Y
Sbjct: 218 CAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQN--YGI 275
Query: 345 VP-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL-- 397
VP C L +AG L + + +PD + ++GAC + E+ ++
Sbjct: 276 VPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAE 335
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV-----SWSSLIVGYA 452
H M+ +A ++V+ L ++Y G A ++ M+D V+ SW +
Sbjct: 336 HLLGMEVQIA-GIYVL--LSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMH 392
Query: 453 QFGCGEEA---LK--------LFRRMRSSGVRPN 475
F GE + LK L R+M+++G PN
Sbjct: 393 AFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPN 426
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 63/295 (21%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWD---------------FDLFSSLCKQNLYNEALVA 66
+ C L+ AG V D R W+ LF + ++++ + V
Sbjct: 55 YARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVI 114
Query: 67 FDFLQN--------------NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQ 112
+ QN T + ++SAC+ L +L+LGR+ H +++ S
Sbjct: 115 AGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFA 174
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
D V+ + +++MY K GS+EDA VFD+MPQRN VSW ++I GC+Q+G+ N A+ L+ QM
Sbjct: 175 LDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQM 234
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
LQ+G+ P++ +F ++ ACS V GR +L++QN I
Sbjct: 235 LQAGIKPNEISFVGVLSACSHTGLVNEGRGYF----------NLMTQNYGIV-------- 276
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEME-SPNLASWNTIIA 283
D++ + MID + LD A N M P+++ W ++
Sbjct: 277 ------------PDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLG 319
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 290/559 (51%), Gaps = 66/559 (11%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G +H + D + + ++N YG S+E+A VF+EM +R+VVSWT+MI+ C+Q
Sbjct: 140 GDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQ 199
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G + +++ +M G++P++ T S++ AC V GR ++ V K + +
Sbjct: 200 CGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDI 259
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
+NALI+MYTK + DA F ++ + ++K SW
Sbjct: 260 RNALISMYTKCGCLSDALEAFQAMPAR-----------YTK-----------------SW 291
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
NT+I G EA+ +F EM + PDG+T+ S+L AC L +GM +HSYI
Sbjct: 292 NTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKD 351
Query: 339 KGF-------------YSN-----------------------VPVCNAILQHQAGELFRL 362
G Y+ V VC + HQ F L
Sbjct: 352 NGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNL 411
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M ++ + ++ AC+ + +L+ G ++H YI + +A D+ + + L+DMY K
Sbjct: 412 FEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAK 471
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVG 481
CG + +A E+F M+ +SW+++I G A G G+EA++LF +M +P+ +TL
Sbjct: 472 CGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKA 531
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL AC+HVG+V+EGL+ + +M + G++P E C+VDLL RAG + EA FI +M +
Sbjct: 532 VLGACAHVGMVDEGLRYFYLMSS-LGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIE 590
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ V+W SLLA+C+ H +D+GK ++I+ + P + VL+ N++A +W++V +
Sbjct: 591 PNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVR 650
Query: 602 GSMKERGVRKVPGQSWIEI 620
G M RG+ K PG S +++
Sbjct: 651 GLMGSRGIEKTPGHSSVQV 669
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 230/524 (43%), Gaps = 78/524 (14%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED---ARMVFDEMPQ 143
+ AC+S L ++H ++ + D+ + ++ + + D AR VFD M Q
Sbjct: 24 LDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQ 80
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS---GLCCVGLG 200
N W MI G S A+ ++ +M + G+ PD +T +++ A + GL G
Sbjct: 81 PNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNG 140
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+HA V + S + + L+ Y F +
Sbjct: 141 DAIHALVRRIGFTSDVFVMSGLVNYY----------------------------GAFRSV 172
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ A VF EM ++ SW ++I+ A C + ++ + + SEM +IP+ +T+ SLL AC
Sbjct: 173 EEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSAC 232
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
++ +G +++ + K G ++V + NA++
Sbjct: 233 GQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWN 292
Query: 353 --------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
H+ E R+F ML PD IT V+ ACA + L G +H YI
Sbjct: 293 TLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDN 352
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G+ D + N L++MY KCG + +A +F M DVVSW+ ++ GY + A LF
Sbjct: 353 GICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLF 412
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M+ + V + + LV +L+ACS +G +++G +++ ++ E + S +VD+ A+
Sbjct: 413 EEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIE-EMNVAKDLCLESALVDMYAK 471
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
G + A + +M + W +++ ++G GK A E
Sbjct: 472 CGCIDTASEIFRKMQHKQTL-SWNAMIGGLASNG---YGKEAVE 511
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 173/389 (44%), Gaps = 37/389 (9%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFD--FLQNNTNFRIR 79
+ C L A E + R+ W+ L + + + EAL F+ L T I
Sbjct: 267 YTKCGCLSDALEAFQAMPARYTKSWN-TLIDGFVQNHEHKEALRIFEEMLLHGVTPDGI- 324
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T ++SAC+ L L+ G VH +I + D +L N ++NMY KCG + A VF
Sbjct: 325 --TLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQ 382
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M +++VVSWT M+ G + Q A L+ +M + ++ + S++ ACS L +
Sbjct: 383 TMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDK 442
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR++H+++ + L ++AL+ MY K I A +F + K SW
Sbjct: 443 GREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSW--------- 493
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD-RELIPDGLTVRSLLC 318
N +I G+AS EA+ LF +M + ++ PDG+T++++L
Sbjct: 494 -------------------NAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLG 534
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHI 376
AC + +G++ + G + C L +AG L F + +P+ +
Sbjct: 535 ACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPV 594
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ ++ AC +++G + +I+
Sbjct: 595 IWGSLLAACRVHHRMDLGKVIGQHIVNVA 623
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/635 (29%), Positives = 313/635 (49%), Gaps = 74/635 (11%)
Query: 34 VVDSFLRRFD------DIWDFDLFSSLCKQN-LYNEALVAFDFLQNNTNFRIRPSTYADL 86
++DS +R F+ D+ ++ S C QN ++ +AL F +Q + T +
Sbjct: 214 ILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAV-LSMNSYTTVGV 272
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ C+ L L LGR++H +L S + + + N +L MY KCG ++ A VF E+ +++
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDY 331
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW +M++ QNG AIE +ML+ G PD S+ A L + G+++HA+
Sbjct: 332 ISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAY 391
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
IK S N L+ MY K I +++ V
Sbjct: 392 AIKQRLDSDTQVGNTLMDMYMKCRYI----------------------------EYSAHV 423
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F+ M + SW TII A S EA+ +F E + D + + S+L AC+ ++
Sbjct: 424 FDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETI 483
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFR----------------------- 361
Q+H Y I+ G ++ V N I+ + GE++
Sbjct: 484 LLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCY 542
Query: 362 -----------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
LF+ M ++ +PD + ++GA ++SL G ++H ++++ ++
Sbjct: 543 ANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEE 602
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+++ L+DMY CGSL A ++FN ++ D+V W+++I G G++A+ LF+RM +
Sbjct: 603 AIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQT 662
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
GV P+HV+ + +L ACSH LV EG +M + Y + P +E +CVVDLL R+G+ E
Sbjct: 663 GVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEE 722
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A +FI M VVW SLL +C+ H N ++ AA +L+++P N VL+ N++A
Sbjct: 723 AYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAE 782
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
GKW + + ERG+RK P SWIEI +H
Sbjct: 783 MGKWNNAKEVRARISERGLRKDPACSWIEIGNNVH 817
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 165/663 (24%), Positives = 278/663 (41%), Gaps = 141/663 (21%)
Query: 51 FSSLCKQNLYNEALVAFDFLQNNTNFRIRPST-YADLISACSSLRSLQLGRKVHDHILSS 109
LCK+ +AL L + T R P Y ++ ++ +++ G +VH H +++
Sbjct: 31 LKQLCKEGNLRQAL---RLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVAT 87
Query: 110 KC--QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
D L +L MYGKCG + DAR++FD M R V SW A+I +G A+
Sbjct: 88 GSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALG 147
Query: 168 LYVQM---LQSGLMPDQFTFGSIIRACSGLCCVGLGR---QLHAHVIKSEHGSHLISQNA 221
+Y M SG+ PD T S+++A SG+ G GR ++H +K NA
Sbjct: 148 VYRAMRLSAASGVAPDGCTLASVLKA-SGV--EGDGRCGCEVHGLAVKHGLDRSTFVANA 204
Query: 222 LIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMIDG-------FSKLDFAR--------- 264
LIAMY K + A VF + +D+ SW SMI G LD R
Sbjct: 205 LIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSM 264
Query: 265 ---------TVFNEMESPNLA----------------SWNTIIAGVASCSNANEAMSLFS 299
V E+ NL N ++ C + A+ +F
Sbjct: 265 NSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFR 324
Query: 300 EMGDRELI-------------------------------PDGLTVRSLLCACTSPLSLYQ 328
E+ +++ I PD + SL A L
Sbjct: 325 EIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLN 384
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTK-PDHITFN-------- 379
G ++H+Y IK+ S+ V N ++ + +S + + + DHI++
Sbjct: 385 GKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQ 444
Query: 380 ---------------------------DVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
++ AC+ + ++ + QLHCY ++ GL LD+ V
Sbjct: 445 SSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVV 503
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N ++D+Y +CG + + ++F +E D+V+W+S+I YA G EAL LF M+S+ V
Sbjct: 504 KNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDV 563
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLY-----RIMQNEYGIIPTRERRSCVVDLLARAGR 527
+P+ V LV +L A + + +G +++ R E I+ S +VD+ + G
Sbjct: 564 QPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIV------SSLVDMYSGCGS 617
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVL 583
+ A N + D+V+W +++ + HG+ +D+ KR + + D + AL+
Sbjct: 618 LSGALKVFNAVKC-KDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLY 676
Query: 584 LCN 586
C+
Sbjct: 677 ACS 679
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 316/617 (51%), Gaps = 72/617 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST+ LI AC ++LG +VH IL + L+N+++ +Y KCG L++ +F++
Sbjct: 134 STFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEK 193
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M R+V+SW MI+ G A++L+ +ML SG++PD+ T S++ C+ L + +G
Sbjct: 194 MTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMG 253
Query: 201 RQLHAHVI----------------------KSEHGSHLISQ-----------NALIAMYT 227
++LH +++ K + L+S+ L++ Y
Sbjct: 254 KRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYV 313
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEME----SPNLASWNT 280
K ++I A +F + + + SW +M+ G+ + + + +F +M P+ + T
Sbjct: 314 KSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVT 373
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL------------------CACTS 322
+++ + + S+ + + ++ DG +LL C S
Sbjct: 374 VLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS 433
Query: 323 PLS---LYQGMQIHSYIIK-KGFYSNVP---------VCNAILQHQA-GELFRLFSLMLA 368
S + G + K + F++ +P + NA ++H E F +F M +
Sbjct: 434 AASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQS 493
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
S KPD T ++ +CA + +L G ++ YI K + +D + L+DMY KCG +
Sbjct: 494 SNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEM 553
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A E+F + + +V W++++ YA G EA+ L+ M GV+P+HVT + +L ACSH
Sbjct: 554 AYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSH 613
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLV+EG + + +++ Y IIPT C+VDLL R G + E FI +M + D+ +W
Sbjct: 614 GGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWS 673
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
SL+ +C++H NV++ ++A + +++IDPTN+ A VLL NIYA +G+W++V+++ + E G
Sbjct: 674 SLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETG 733
Query: 609 VRKVPGQSWIEIQTKIH 625
V K PG + IE +H
Sbjct: 734 VPKQPGFTMIEQNGVVH 750
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 228/534 (42%), Gaps = 70/534 (13%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+RP DL+ +CS++R +H H++++ D + + +L +L+ A +
Sbjct: 33 LRPHWIIDLLKSCSNIREFS---PIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQI 89
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
+ + W ++ + G +E Y M+ G++ D TF +I AC V
Sbjct: 90 LSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDV 149
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG ++H ++K G + N L+ +Y+K ++ + +F + +D+ SW +MI +
Sbjct: 150 KLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCY 209
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
++ G+ EA+ LF EM ++PD +T+ SL+
Sbjct: 210 -----------------------VLKGM-----YREALDLFDEMLVSGVLPDEITMVSLV 241
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
C L G ++H YI+ + + N ++
Sbjct: 242 STCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLV------------------------- 276
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCGSLGSARELFNFM 436
D+ C M + H + + + +DV + L+ YVK + AR+LF+ M
Sbjct: 277 --DMYSKCGKM------DEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKM 328
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ +VSW++++ GY Q G E+L+LF++MR V P+ V LV VL+AC H+ + G
Sbjct: 329 NERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGR 388
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
++ + YG++ + ++DL A+ G++ EA Q+ W S+L
Sbjct: 389 SVHAFIVT-YGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPC-KSAASWNSMLDGFCR 446
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
G VD +A + KI + + + N Y + E + M+ V+
Sbjct: 447 SGGVD---KARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVK 497
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 140/289 (48%), Gaps = 41/289 (14%)
Query: 35 VDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
VD F+ I + D+ S + K +L+NE+ F +Q+ +N + +T L+S
Sbjct: 450 VDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQS-SNVKPDKTTLISLLS 508
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
+C+ + +L G V+ +I ++ DA+L +++MYGKCG +E A +F ++ ++NV
Sbjct: 509 SCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFV 568
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WTAM+A + GQ AI+LY++M + G+ PD TF +++ ACS
Sbjct: 569 WTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACS---------------- 612
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
HG L+ + Y F+++ +N+ +I +G M+D ++
Sbjct: 613 ---HGG-LVDEG-----YKYFNKLRSFYNIIPTIHH-----YGCMVDLLGRVGHLEETVK 658
Query: 269 EME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+E P+++ W++++ S N A F ++ + + +G V
Sbjct: 659 FIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHV 707
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 285/561 (50%), Gaps = 71/561 (12%)
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
+VH + + DA + + ++ +Y +CGSL A VF M +VV +T++++ +NG
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
+ A+++ QM + GL P++ T S++ C G+G Q+H +++K + +
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYAST 272
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
ALI Y+++ A+TVF +ES N+ SW +
Sbjct: 273 ALIDFYSRY----------------------------GDFGTAKTVFENLESKNVVSWCS 304
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
++ ++A+ +FSEM + P+ L AC S + G QIH IK+
Sbjct: 305 MMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGS---VCLGRQIHCSAIKRD 361
Query: 341 FYSNVPVCNAIL---------------------------------QHQAGELFRLFSLML 367
+++ V NA+L Q G + +L+L
Sbjct: 362 LMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLL 421
Query: 368 ASQTK---PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
++ P+ F+ + +CA +A L G QLHC +K G V N L++MY KCG
Sbjct: 422 QMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCG 481
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+GSAR F+ M+ DV+SW+SLI G AQ G AL+ F M SS RP+ T + VL
Sbjct: 482 RIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLV 541
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
C+H GLV+EG +R M + YG+ PT +C++D+L R GR EA I M F+ D+
Sbjct: 542 GCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDV 601
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
++WK+LLASCK H N+D+GK AA+ ++++ +SA+ VL+ N+YA +W + R+ M
Sbjct: 602 LIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRM 661
Query: 605 KERGVRKVPGQSWIEIQTKIH 625
E GV+K G SWIE++ +++
Sbjct: 662 DEIGVKKDAGWSWIEVKNEVN 682
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 235/518 (45%), Gaps = 85/518 (16%)
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
PD VL L+ K G L DA +FD MP++NVV+WT I+GC++NG+ AA ++ M
Sbjct: 68 PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
L+SG+ P+ F + + AC+ +GLG Q+H+ +++ + + LI +Y++
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSR---- 183
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
L A VF ME+P++ + ++++ +
Sbjct: 184 ------------------------CGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELA 219
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK-------------- 338
A+ + +M + L P+ T+ S+L C + G QIH Y++K
Sbjct: 220 RAVDVLCQMTRQGLQPNEHTMTSMLAECPRGI----GEQIHGYMLKVMGSQSVYASTALI 275
Query: 339 ------------KGFYSNVPVCNA----------ILQHQAGELFRLFSLMLASQTKPDHI 376
K + N+ N I + + R+FS M++ +P+
Sbjct: 276 DFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEF 335
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
F+ + AC S+ +G Q+HC +K L D+ V N L+ MY + G + + +
Sbjct: 336 AFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKI 392
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
E+PD+VSW++ I Q G E+A+ L +M S G PN L++C+ + L+ +G
Sbjct: 393 ENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGR 452
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD----DDIVVWKSLLA 552
QL+ + + G + ++++ ++ GR+ A ++AFD D++ W SL+
Sbjct: 453 QLH-CLALKLGCDFKVCTGNALINMYSKCGRIGSA-----RLAFDVMDTHDVMSWNSLIH 506
Query: 553 SCKTHGNVDVGKRAAENILKID--PTNSAALVLL--CN 586
HG+ ++ + D P +S L +L CN
Sbjct: 507 GLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCN 544
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 294/573 (51%), Gaps = 16/573 (2%)
Query: 62 EALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
EA FD ++ I+PS T L+ S L +Q +H + D L N
Sbjct: 145 EAFSLFDEMRRQG---IQPSSVTVLSLLFGVSELAHVQC---LHGCAILYGFMSDINLSN 198
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+LN+YGKCG++E +R +FD M R++VSW ++I+ +Q G + L M G
Sbjct: 199 SMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEA 258
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
TFGS++ + + LGR LH ++++ + +LI +Y K +I A+ +F
Sbjct: 259 GPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMF 318
Query: 240 SSIARKDITSWGSMIDGFSK---LDFARTVFNEM----ESPNLASWNTIIAGVASCSNAN 292
+ KD+ W +MI G + D A VF +M P+ A+ ++I A + N
Sbjct: 319 ERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYN 378
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAI 351
S+ + +EL D T SL+ L Q + + ++ S N V
Sbjct: 379 LGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYA 438
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
E LF+ M + PD IT ++ CA+ L +G +H ++++ GL +
Sbjct: 439 QNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCIL 498
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V L+DMY KCG L +A+ FN M D+VSWS++IVGY G GE AL+ + + SG
Sbjct: 499 VDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESG 558
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
++PNHV + VL++CSH GLVE+GL +Y M ++GI P E +CVVDLL+RAGRV EA
Sbjct: 559 MKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEA 618
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
+ + D + V +L +C+ +GN ++G A +IL + P ++ V L + YAS
Sbjct: 619 YNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASI 678
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
KWEEV M+ G++K+PG S+I+I I
Sbjct: 679 NKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTI 711
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/528 (27%), Positives = 234/528 (44%), Gaps = 71/528 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+ ACS L LG +H IL S DA + + ++N Y K G + AR VFD M
Sbjct: 63 TFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYM 122
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+RNVV WT +I S+ G+ A L+ +M + G+ P T S++ S L V +
Sbjct: 123 PERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV---Q 179
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH I S + N+++ +Y K I + +F + +D+ SW S+I ++++
Sbjct: 180 CLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQI- 238
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N E + L M + T S+L
Sbjct: 239 ---------------------------GNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAA 271
Query: 322 SPLSLYQGMQIHSYIIKKGFY--SNVPVCNAILQHQAGEL---FRLFSL----------- 365
S L G +H I++ GFY ++V ++ + G++ FR+F
Sbjct: 272 SRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTA 331
Query: 366 --------------------MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
ML KP T V+ ACA + S +GT + YI++
Sbjct: 332 MISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQE 391
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L LDV N L+ MY KCG L + +F+ M D+VSW++++ GYAQ G EAL LF
Sbjct: 392 LPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFN 451
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLAR 524
MRS P+ +T+V +L C+ G + G ++ +++N G+ P + +VD+ +
Sbjct: 452 EMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRN--GLRPCILVDTSLVDMYCK 509
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
G + A+ NQM D+V W +++ HG + R L+
Sbjct: 510 CGDLDTAQRCFNQMP-SHDLVSWSAIIVGYGYHGKGEAALRFYSKFLE 556
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 198/486 (40%), Gaps = 100/486 (20%)
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
S A I S G + + Y ML++ + D +TF S+++ACS L LG LH +
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ S ++LI Y KF GF+ D AR VF
Sbjct: 88 LVSGLSLDAYIASSLINFYAKF--------------------------GFA--DVARKVF 119
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
+ M N+ W TII + EA SLF EM + + P +TV SLL + L
Sbjct: 120 DYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVS---ELA 176
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQ---------------------------------H 354
+H I GF S++ + N++L
Sbjct: 177 HVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYA 236
Query: 355 QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q G E+ L M + TF V+ A+ L++G LH I++ G LD
Sbjct: 237 QIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAH 296
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V L+ +Y+K G + A +F D DVV W+++I G Q G ++AL +FR+M G
Sbjct: 297 VETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFG 356
Query: 472 VRPNHVTLVGVLTACSHVG-----------LVEEGLQLYRIMQNE----YGIIPTRERRS 516
V+P+ T+ V+TAC+ +G ++ + L L QN Y ++ S
Sbjct: 357 VKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSS 416
Query: 517 CVVDLL---------------ARAGRVHEAEDFINQMAFDD---DIVVWKSLLASCKTHG 558
V D++ A+ G V EA N+M D+ D + SLL C + G
Sbjct: 417 IVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTG 476
Query: 559 NVDVGK 564
+ +GK
Sbjct: 477 QLHLGK 482
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 197/721 (27%), Positives = 334/721 (46%), Gaps = 124/721 (17%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C + +C D + D+ + W+ + SS + LY+E L F + + T
Sbjct: 123 CTRIITMYAMCGSPDDSRSAFDALRSKNLFQWN-AVISSYSRNELYHEVLEMFIKMISKT 181
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+ T+ +I AC+ + + +G VH ++ + D + N +++ YG G + DA
Sbjct: 182 HLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDA 241
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+FD MP+RN+VSW +MI S NG + A MPD T +++ C+
Sbjct: 242 LKLFDIMPERNLVSWNSMIRVFSDNGDDGA------------FMPDVATVVTVLPVCARE 289
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+G+G+ +H +K L+ NAL+ MY+K+ I+D+ +F K++ SW +M+
Sbjct: 290 REIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMV 349
Query: 255 DGFS-------KLDFARTV---------------------FNEMESPNLASW-------- 278
GFS D R + F+E P+L
Sbjct: 350 GGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQE 409
Query: 279 --------NTIIAGVASCSNANEAMSLFS------------------------------- 299
N +A A C + + A +F
Sbjct: 410 FVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHL 469
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAG 357
+M + L+PD TV SLL AC+ SL G ++H +II+ ++ V ++L G
Sbjct: 470 QMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 529
Query: 358 EL----------------------------------FRLFSLMLASQTKPDHITFNDVMG 383
EL LF M+ +P I+ V G
Sbjct: 530 ELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFG 589
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
AC+ + SL +G + H Y +K L + F+ ++DMY K G++ + ++FN +++ S
Sbjct: 590 ACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAAS 649
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+++I+GY G +EA+KLF M+ +G P+ +T +GVLTAC+H GL+ EGL+ M+
Sbjct: 650 WNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMK 709
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
+ +G+ P + +CV+D+L RAG++ A +M+ + D+ +W SLL+ C+ H N+++G
Sbjct: 710 SSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMG 769
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
++ A + ++P VLL N+YA GKW++V ++ MKE +RK G SWIE+ K
Sbjct: 770 EKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGK 829
Query: 624 I 624
+
Sbjct: 830 V 830
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 232/519 (44%), Gaps = 94/519 (18%)
Query: 86 LISACSSLRSLQLGRKVHDHILS--SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
L+ A + +++GRK+H H++S ++ + D VL I+ MY CGS +D+R FD +
Sbjct: 90 LLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRS 148
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+N+ W A+I+ S+N + +E++++M+ ++ L+PD FTF +I+AC+G+ VG+G
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H V+K+ L NAL++ Y + DA +F + +++ SW SMI
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI-------- 260
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-ELIPDGLTVRSLLCACT 321
+FS+ GD +PD TV ++L C
Sbjct: 261 ---------------------------------RVFSDNGDDGAFMPDVATVVTVLPVCA 287
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------- 356
+ G +H + +K + V NA++ +
Sbjct: 288 REREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNT 347
Query: 357 --------GEL---FRLFSLMLA--SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
G++ F L MLA K D +T + + C + L +LHCY +K
Sbjct: 348 MVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLK 407
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
D + N + Y KCGSL A+ +F+ + + SW++LI GYAQ +L
Sbjct: 408 QEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDA 467
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
+M++SG+ P++ T+ +L+ACS + + G +++ II R V L
Sbjct: 468 HLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGF------IIRNWLERDLFVYLSV 521
Query: 524 RAGRVHEAEDFINQMAF----DDDIVVWKSLLASCKTHG 558
+ +H E Q+ F D+ +V W +++ +G
Sbjct: 522 LSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNG 560
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 381 VMGACAAMASLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
++ A +EMG ++H + T L D + ++ MY CGS +R F+ +
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
++ W+++I Y++ E L++F +M S + + P++ T V+ AC+ + V GL +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++ + G++ + +V G V +A + M + ++V W S++ +G
Sbjct: 210 HGLVV-KTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP-ERNLVSWNSMIRVFSDNG 267
Query: 559 N 559
+
Sbjct: 268 D 268
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 268/496 (54%), Gaps = 40/496 (8%)
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
VQ+L P T+ ++I+ CS + G+++H H+ S ++ N ++ MY K
Sbjct: 76 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKC 135
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVA 286
++DA VF + +D+ SW M++G+++ L+ AR +F+EM + SW ++ G
Sbjct: 136 GSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYV 195
Query: 287 SCSNANEAMSLFSEMGD-RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
EA+ L+S M P+ TV S + A + + +G +IH +I++ G S+
Sbjct: 196 KKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDE 255
Query: 346 PVCNAILQHQAG------------------------------------ELFRLFSLMLAS 369
+ ++++ E F LFS ++ S
Sbjct: 256 VLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGS 315
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+P+ TF+ V+ ACA + + E+G Q+H Y+ + G F + L+DMY KCG++ SA
Sbjct: 316 CERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESA 375
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
R + + PD+VS +SLI GYAQ G +EALK F + SG +P+HVT V VL+AC+H
Sbjct: 376 RHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 435
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
GLVE+GL+ + + ++ + T + +C+VDLLAR+GR + + +++M +W S
Sbjct: 436 GLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWAS 495
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+L C T+GN+D+ + AA+ + KI+P N V + NIYA++GKWEE ++ M+E G+
Sbjct: 496 VLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGI 555
Query: 610 RKVPGQSWIEIQTKIH 625
K PG SW EI+ K H
Sbjct: 556 TKKPGSSWTEIKRKRH 571
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 227/499 (45%), Gaps = 77/499 (15%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
LL++A + D R W + + K++ EALV + +Q N + T +
Sbjct: 168 LLEEARNLFDEMPERDSYSWT-AMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSA 226
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
++A ++++ ++ G+++H HI+ + D VL + +++MYGKCG +++AR +FD++ ++V
Sbjct: 227 VAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDV 286
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSWT+MI ++ + L+ +++ S P+++TF ++ AC+ L LGRQ+H +
Sbjct: 287 VSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGY 346
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+ + + + ++LI MYTK I A +V +DG K
Sbjct: 347 MTRVGFDPYSFASSSLIDMYTKCGNIESARHV---------------VDGCPK------- 384
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
P+L S ++I G A +EA+ F + PD +T ++L ACT +
Sbjct: 385 ------PDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 438
Query: 327 YQGMQIHSYIIKK---GFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+G++ I +K S+ C L ++G +L S++ KP + V+G
Sbjct: 439 EKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLG 498
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
C+ ++++ + +A+ELF +E + V+
Sbjct: 499 GCSTYGNIDLAEE-------------------------------AAQELFK-IEPENPVT 526
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGV------------RPNHVTLVGVLTACSHVGL 491
+ ++ YA G EE K+ +RM+ G+ R HV + + + +
Sbjct: 527 YVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQI 586
Query: 492 VEEGLQLYRIMQNEYGIIP 510
+E +L + M+ E G +P
Sbjct: 587 IEFLGELRKKMKEE-GYVP 604
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 262/518 (50%), Gaps = 62/518 (11%)
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ ++ MIAG + A ++ +M+ L P+ FT S+++AC G+ C+ GR +
Sbjct: 56 KGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLV 115
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H IK + NAL+ MY T SM D A
Sbjct: 116 HGLAIKHGLDGFIYVDNALMDMYA--------------------TCCVSMDD-------A 148
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
VF + N SW T+IAG + + +F +M E+ + + + ACTS
Sbjct: 149 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 208
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------- 352
S G Q+H+ + K GF SN+PV N+IL
Sbjct: 209 GSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLI 268
Query: 353 ----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+ E +FS+M + P+ TF +M ACA +A L G Q+H I++ GL
Sbjct: 269 AGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDG 328
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++ + N L+DMY KCG++ + ++F M D+VSW+++++GY G GEEA++LF +M
Sbjct: 329 NLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMV 388
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
SG+RP+ V + +L+ACSH GLV+EGL+ +++M +Y I P +E CVVDLL RAG+V
Sbjct: 389 RSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKV 448
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA + I M F D VW L +CK H ++GK AA IL + P + V+L NIY
Sbjct: 449 EEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIY 508
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
A+ GKW E ARL MK G +K G+SW+E+ +++
Sbjct: 509 AADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYS 546
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 40/325 (12%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ P +++ + AC+S+ S G ++H + + + + N IL+MY +C +A
Sbjct: 192 ELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANR 251
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV-QMLQS-GLMPDQFTFGSIIRACSGL 194
F EM QR++++W +IAG ++ N LYV M++S G P+ FTF SI+ AC+ L
Sbjct: 252 YFYEMNQRDLITWNTLIAGYERS---NPTESLYVFSMMESEGFSPNCFTFTSIMAACATL 308
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+Q+H +I+ +L NALI MY+K I D+ VF ++R+D+ SW +M+
Sbjct: 309 AFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMM 368
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
G+ + EA+ LF +M + PD +
Sbjct: 369 IGYGTHGYGE----------------------------EAVELFDKMVRSGIRPDRVVFM 400
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLAS 369
++L AC+ + +G++ ++ G Y+ P C L +AG++ + L+ +
Sbjct: 401 AILSACSHAGLVDEGLRYFKLMV--GDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESM 458
Query: 370 QTKPDHITFNDVMGACAAMASLEMG 394
KPD + +GAC A +G
Sbjct: 459 PFKPDECVWGPFLGACKAHTFPNLG 483
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 169/406 (41%), Gaps = 68/406 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-SLEDARMVFDE 140
T + ++ AC ++ L GR VH + + N +++MY C S++DA MVF
Sbjct: 95 TISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRG 154
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ +N VSWT +IAG + + ++ QML + + F+F +RAC+ + G
Sbjct: 155 IHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFG 214
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
QLHA V K S+L N+++ MY + +A F + ++D+ +W ++I G+ +
Sbjct: 215 EQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYER- 273
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
SN E++ +FS M P+ T S++ AC
Sbjct: 274 ----------------------------SNPTESLYVFSMMESEGFSPNCFTFTSIMAAC 305
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------QHQ-------------- 355
+ L G QIH II++G N+ + NA++ HQ
Sbjct: 306 ATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWT 365
Query: 356 -----------AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMK 403
E LF M+ S +PD + F ++ AC+ ++ G + +
Sbjct: 366 AMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGD 425
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++ D + ++D+ + G + A EL M PD W +
Sbjct: 426 YNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFL 471
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 151/345 (43%), Gaps = 45/345 (13%)
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A T+ L +IAG SC+N A +F EM + EL P+ T+ S+L AC
Sbjct: 45 LATTLIKSYFGKGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACK 104
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-------------------HQAGEL--- 359
L G +H IK G + V NA++ H E+
Sbjct: 105 GMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWT 164
Query: 360 ---------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
R+F ML + + + +F+ + AC ++ S G QLH + K
Sbjct: 165 TLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKH 224
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G ++ VMN ++DMY +C A F M D+++W++LI GY + E+L +F
Sbjct: 225 GFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSN-PTESLYVF 283
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLA 523
M S G PN T ++ AC+ + + G Q++ RI++ G+ + ++D+ +
Sbjct: 284 SMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRR--GLDGNLALSNALIDMYS 341
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
+ G + ++ M+ D+V W +++ THG G+ A E
Sbjct: 342 KCGNIADSHQVFGGMS-RRDLVSWTAMMIGYGTHG---YGEEAVE 382
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
E+L F +++ F T+ +++AC++L L G+++H I+ + L N
Sbjct: 277 TESLYVFSMMESE-GFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNA 335
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++MY KCG++ D+ VF M +R++VSWTAM+ G +G A+EL+ +M++SG+ PD
Sbjct: 336 LIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPD 395
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA-----LIAMYTKFDRILDA 235
+ F +I+ ACS V G + ++ G + IS + ++ + + ++ +A
Sbjct: 396 RVVFMAILSACSHAGLVDEGLRYFKLMV----GDYNISPDQEIYGCVVDLLGRAGKVEEA 451
Query: 236 WNVFSSIARK-DITSWGSMI 254
+ + S+ K D WG +
Sbjct: 452 YELIESMPFKPDECVWGPFL 471
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 279/531 (52%), Gaps = 33/531 (6%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+ VH + + + L ++ Y G AR VFD +P+RNV+ + MI N
Sbjct: 52 KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
+ A+ ++ M+ G PD +T+ +++ACS + +G QLH V K +L
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVG 171
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
N LIA+Y K L AR V +EM+S ++ SWN
Sbjct: 172 NGLIALYGKC----------------------------GCLPEARCVLDEMQSKDVVSWN 203
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS---LYQGMQIHSYI 336
+++AG A ++A+ + EM PD T+ SLL A T+ S LY ++ +
Sbjct: 204 SMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVE-EMFMNL 262
Query: 337 IKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
KK S NV + + G+ L+ M + +PD IT V+ AC +++L +G
Sbjct: 263 EKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGR 322
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H Y+ + L ++ + N L+DMY +CG L A+ +F+ M+ DV SW+SLI Y G
Sbjct: 323 RIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTG 382
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G A+ LF M++SG P+ + V +L+ACSH GL+ EG ++ M ++Y I P E
Sbjct: 383 QGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHF 442
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VDLL R+GRV EA + I QM + VW +LL+SC+ + N+D+G AA+ +L++ P
Sbjct: 443 ACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAP 502
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
S VLL NIYA +G+W EV + MK R +RK+PG S +E+ ++H
Sbjct: 503 EESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHT 553
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 124/576 (21%), Positives = 235/576 (40%), Gaps = 114/576 (19%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S +LY++AL+ F + + F TY ++ ACS +L++G ++H +
Sbjct: 104 MIRSYMNNHLYDDALLVFRDMVSG-GFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKV 162
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N ++ +YGKCG L +AR V DEM ++VVSW +M+AG +QN Q + A+++
Sbjct: 163 GLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDIC 222
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M PD T S++ A + T
Sbjct: 223 REMDGVRQKPDACTMASLLPAVTN---------------------------------TSS 249
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ +L +F ++ +K + SW MI + K N M
Sbjct: 250 ENVLYVEEMFMNLEKKSLVSWNVMISVYMK--------NSM------------------- 282
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+++ L+ +MG E+ PD +T S+L AC +L G +IH Y+ +K N+ + N
Sbjct: 283 -PGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLEN 341
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ------LHCYIMK 403
+++ +++ + ++ D + F DV + +++ M Q L +
Sbjct: 342 SLI-----DMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQN 396
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-----PDVVSWSSLIVGYAQFGCGE 458
+G + D ++ G L + F M D P + ++ L+ + G +
Sbjct: 397 SGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVD 456
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL----QLYRIMQNEYGIIPTRER 514
EA + ++M ++PN +L++C ++ G+ +L ++ E G
Sbjct: 457 EAYNIIKQM---PMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYY----- 508
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+ ++ A+AGR E + +SL+ + R I ++
Sbjct: 509 -VLLSNIYAKAGRWTE-------------VTAIRSLMKRRRI--------RKMPGISNVE 546
Query: 575 PTNSAALVLLCNIYASSGK--WEEVARLMGSMKERG 608
N L + Y K +EE++ L+G MKE G
Sbjct: 547 LNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELG 582
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 268/499 (53%), Gaps = 46/499 (9%)
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
VQ+L P T+ ++I+ CS + G+++H H+ S ++ N L+ MY K
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVA 286
++DA VF + +D+ SW M++G+++ L+ AR +F+EM + SW ++ G
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 287 SCSNANEAMSLFSEMGDRELIPDG----LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
EA+ L+S M + +P+ TV + A + + +G +IH +I++ G
Sbjct: 194 KKDQPEEALVLYSLM---QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 343 SNVPVCNAILQHQAG------------------------------------ELFRLFSLM 366
S+ + ++++ E F LFS +
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+ S +P+ TF V+ ACA + + E+G Q+H Y+ + G F + L+DMY KCG++
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
SA+ + + PD+VSW+SLI G AQ G +EALK F + SG +P+HVT V VL+AC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
+H GLVE+GL+ + + ++ + T + +C+VDLLAR+GR + + I++M +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W S+L C T+GN+D+ + AA+ + KI+P N V + NIYA++GKWEE ++ M+E
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 607 RGVRKVPGQSWIEIQTKIH 625
GV K PG SW EI+ K H
Sbjct: 551 IGVTKRPGSSWTEIKRKRH 569
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 233/557 (41%), Gaps = 122/557 (21%)
Query: 29 DQAGEVVDSFLR--RFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
+ G VV+ R RF + D LC Q L EA+ + + STY +L
Sbjct: 42 EDGGVVVERLCRANRFGEAIDV-----LCGQKLLREAVQLLGRAK-----KPPASTYCNL 91
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL--------------- 131
I CS R+L+ G+KVH+HI +S P V+ N +L MY KCGSL
Sbjct: 92 IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151
Query: 132 ----------------EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ- 174
E+AR +FDEM +++ SWTAM+ G + Q A+ LY M +
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
P+ FT + A + + C+ G+++H H++++ S + ++L+ MY K I +
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
A N+F I KD+ SW SMID + K S E
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFK----------------------------SSRWREG 303
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--YS--------- 343
SLFSE+ P+ T +L AC + G Q+H Y+ + GF YS
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDM 363
Query: 344 -----NVPVCNAIL--------------------QHQAGELFRLFSLMLASQTKPDHITF 378
N+ ++ Q E + F L+L S TKPDH+TF
Sbjct: 364 YTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 379 NDVMGACAAMASLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+V+ AC +E G + I K L+ L+D+ + G + + + M
Sbjct: 424 VNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP 483
Query: 438 -DPDVVSWSSLIVGYAQFG----CGEEALKLFRRMRSSGVRP-NHVTLVGVLTACSHVGL 491
P W+S++ G + +G E A +LF+ + P N VT V + + G
Sbjct: 484 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAGK 537
Query: 492 VEEGLQLYRIMQNEYGI 508
EE ++ + MQ E G+
Sbjct: 538 WEEEGKMRKRMQ-EIGV 553
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 229/499 (45%), Gaps = 77/499 (15%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
LL++A ++ D + W + + K++ EALV + +Q N R T +
Sbjct: 166 LLEEARKLFDEMTEKDSYSWT-AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
++A ++++ ++ G+++H HI+ + D VL + +++MYGKCG +++AR +FD++ +++V
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSWT+MI ++ + L+ +++ S P+++TF ++ AC+ L LG+Q+H +
Sbjct: 285 VSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY 344
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+ + + + ++L+ MYTK I A +V +DG K D
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHV---------------VDGCPKPD----- 384
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
L SW ++I G A +EA+ F + PD +T ++L ACT +
Sbjct: 385 --------LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 327 YQGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+G++ I +K S+ C L ++G +L S++ KP + V+G
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
C+ ++++ + +A+ELF +E + V+
Sbjct: 497 GCSTYGNIDLAEE-------------------------------AAQELFK-IEPENPVT 524
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGV------------RPNHVTLVGVLTACSHVGL 491
+ ++ YA G EE K+ +RM+ GV R HV + + + +
Sbjct: 525 YVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQI 584
Query: 492 VEEGLQLYRIMQNEYGIIP 510
VE +L + M+ E G +P
Sbjct: 585 VEFLRELRKKMKEE-GYVP 602
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 10/292 (3%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D+A + D + + W + K + + E F L + R
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWT-SMIDRYFKSSRWREGFSLFSELVGSCE-RPN 318
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+A +++AC+ L + +LG++VH ++ P + + +++MY KCG++E A+ V D
Sbjct: 319 EYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD 378
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
P+ ++VSWT++I GC+QNGQ + A++ + +L+SG PD TF +++ AC+ V
Sbjct: 379 GCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438
Query: 200 GRQLHAHVIKSEHGSHLISQ-NALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMIDG- 256
G + + + SH L+ + + R +V S + K W S++ G
Sbjct: 439 GLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC 498
Query: 257 --FSKLDFARTVFNEM---ESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+ +D A E+ E N ++ T+ A+ E + M +
Sbjct: 499 STYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 22/257 (8%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
+L R +L KP T+ +++ C+ +LE G ++H +I +G + + N L+
Sbjct: 68 KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY KCGSL AR++F+ M + D+ SW+ ++ GYA+ G EEA KLF M +
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSY 183
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG-------RVHE 530
+ ++T EE L LY +MQ +P V + A R E
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQR----VPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
I + D D V+W SL+ G +D + + I++ D + +++ + Y
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI---DRYFK 296
Query: 591 SGKWEE----VARLMGS 603
S +W E + L+GS
Sbjct: 297 SSRWREGFSLFSELVGS 313
>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 292/600 (48%), Gaps = 93/600 (15%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKC--QPDAVLHNHILNMYGKCGSLEDARMVFDE 140
YA L AC+ R+L G +H H+LS + +L N ++NMY KCG++ AR VFD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RNVVSWTA+I G Q G E L+ ML S P++FT S++ +C G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCR----YEPG 176
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H +K + NA+I+MY G DG +
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMY------------------------GRCHDGAAAY 212
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ A TVF ++ NL +WN++IA C+ +A+ +F M + G +LL C
Sbjct: 213 E-AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRATLLNIC 268
Query: 321 TSPLSLYQG------------MQIHSYIIKKGFYSNVPVCNAILQ--------------- 353
+S LY+ +Q+HS +K G + V A+++
Sbjct: 269 SS---LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKL 325
Query: 354 ----------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ LF + + PD TF+ V+ ACA + +
Sbjct: 326 FMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+H ++K G D + N L+ Y KCGSL +F+ M+ DVVSW+S++ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+ G + L +F++M + P+ T + +L+ACSH G VEEGL+++R M + +P
Sbjct: 446 SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
+CV+D+L+RA R EAE+ I QM D D VVW +LL SC+ HGN +GK AA+ +
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 572 K-IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH--ASG 628
+ ++PTNS + + + NIY + G + E + M+ VRK P SW EI K+H ASG
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASG 622
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ ++ AC+ L + + +H ++ D VL+N +++ Y KCGSL+ VFD+M
Sbjct: 371 TFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDM 430
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG- 200
R+VVSW +M+ S +GQ ++ + ++ +M + PD TF +++ ACS V G
Sbjct: 431 DSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGL 487
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
R + K E L +I M ++ +R +A V + D W +++
Sbjct: 488 RIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 288/587 (49%), Gaps = 67/587 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L++ C+ L + + H I+ + + N +L+ Y K G L+ AR +F EM
Sbjct: 142 TYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEM 201
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ VS+ MI G + NG AIEL+V+M G P FTF ++I A GL G+
Sbjct: 202 CGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQ 261
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H V+K+ ++ NA + Y+K D + +
Sbjct: 262 QIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEV-------------------------- 295
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
R +FNEM + S+N II A E++ LF E+ ++L
Sbjct: 296 --RKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAA 353
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------- 360
S L L G Q+H+ ++ + V N+++ +A +F
Sbjct: 354 SSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTA 413
Query: 361 ---------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+LF M + D TF V+ A A +AS+ +G QLH ++++G
Sbjct: 414 MISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSG 473
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
++V+ L+DMY C S+ A + F M + +VV+W++L+ YAQ G G+ LK F
Sbjct: 474 F-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFE 532
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M SG +P+ V+ + +LTACSH LVEEGL+ + M Y + P RE + +VD L R+
Sbjct: 533 EMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRS 592
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA-LVLL 584
GR EAE + QM F+ D +VW S+L SC+ H N + ++AA + + AA V +
Sbjct: 593 GRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTM 652
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGND 630
NI+A +G+W+ V ++ +M++RGVRK+P SW+EI+ K+H S ND
Sbjct: 653 SNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSAND 699
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 213/481 (44%), Gaps = 79/481 (16%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
I++ Y K G+L AR +FD+ +R VV+WT MI S++ + A +L+ +M +SG PD
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIK-SEHGSHLISQNALIAMYTKFDRILDAWNVF 239
T+ +++ C+ L Q HA ++K H +H + N L+ Y K
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVC-NTLLDSYFK----------- 187
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
LD AR +F EM + S+N +I G A+ EA+ LF
Sbjct: 188 -----------------TGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFV 230
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----QHQ 355
EM + P T +++ A G QIH +++K F NV V NA L +H
Sbjct: 231 EMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHD 290
Query: 356 -AGELFRLFSLMLASQTKPDHITFNDVMGA------------------------------ 384
E+ +LF+ M + D +++N ++ A
Sbjct: 291 CVNEVRKLFNEM----PELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFP 346
Query: 385 -----CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
A+ L+MG QLH ++ + D V N L+DMY KCG A +F +
Sbjct: 347 TMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSR 406
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
V W+++I Q G E LKLF MR + V + T VL A +++ + G QL+
Sbjct: 407 STVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLH 466
Query: 500 R-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++++ + + + ++D+ A + +A +M+ + ++V W +LL++ +G
Sbjct: 467 SCVIRSGFMNVYS---GCALLDMYANCASIKDAIKTFEEMS-ERNVVTWNALLSAYAQNG 522
Query: 559 N 559
+
Sbjct: 523 D 523
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 9/243 (3%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
T F + + ++S +S LQ+GR++H ++ S PD + N +++MY KCG E+
Sbjct: 336 TTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEE 395
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A +F + R+ V WTAMI+ Q G ++L+ +M ++ + DQ TF +++A +
Sbjct: 396 ADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASAN 455
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L + LG+QLH+ VI+S ++ S AL+ MY I DA F ++ +++ +W ++
Sbjct: 456 LASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNAL 514
Query: 254 IDGFSKLDFARTVFNEMES-------PNLASWNTIIAGVASCSNANEAMSLFSEM-GDRE 305
+ +++ + E P+ S+ I+ + C E + F++M G
Sbjct: 515 LSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYN 574
Query: 306 LIP 308
L P
Sbjct: 575 LAP 577
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 187/456 (41%), Gaps = 70/456 (15%)
Query: 35 VDSFLRRFDDI--WD---FDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
+DS R F ++ WD F++ + N NE + N F+ T+A +ISA
Sbjct: 191 LDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
L G+++H ++ + + + N L+ Y K + + R +F+EMP+ + VS+
Sbjct: 251 SVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSY 310
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
+I + G+ +I+L+ ++ + F F +++ + + +GRQLHA V+
Sbjct: 311 NVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVV 370
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
S N+L+ MY K + +A +F ++ + W +MI
Sbjct: 371 SMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMIS-------------- 416
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
A V + N + LF EM + D T +L A + S+ G
Sbjct: 417 -------------ANVQRGLHEN-GLKLFYEMRRANVSADQATFACVLKASANLASILLG 462
Query: 330 MQIHSYIIKKGF---YS---------------------------NVPVCNAIL----QHQ 355
Q+HS +I+ GF YS NV NA+L Q+
Sbjct: 463 KQLHSCVIRSGFMNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNG 522
Query: 356 AGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVM 413
G+ + F M+ S +PD ++F ++ AC+ +E G + + LA
Sbjct: 523 DGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHY 582
Query: 414 NGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++D + G A +L M +PD + W+S++
Sbjct: 583 TAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVL 618
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 196/466 (42%), Gaps = 87/466 (18%)
Query: 203 LHAHVIKSEHG--SHLISQNALIA--MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
A+ +K+ HG S Q + A + T FD I +N KD++ G +
Sbjct: 9 FRANQLKTLHGASSRQTLQTCIDARIVKTGFDPITSRFNFMI----KDLSERGQLCQ--- 61
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
AR + ++M + N S + II+G N A +F + +R ++
Sbjct: 62 ----ARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVV----------- 106
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
++ G YS ++ G+ F+LF+ M S ++PD++T+
Sbjct: 107 ---------------AWTTMIGAYSK--------SNRFGDAFKLFAEMHRSGSQPDYVTY 143
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++ C + + Q H I+K G L+ V N L+D Y K G L SAR LF M
Sbjct: 144 ITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCG 203
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D VS++ +I GYA G EEA++LF M++ G +P+ T V++A + G Q+
Sbjct: 204 WDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQI 263
Query: 499 Y------RIMQNEY---GIIPTRERRSCV---------------------VDLLARAGRV 528
+ ++N + + + CV + A G+V
Sbjct: 264 HGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKV 323
Query: 529 HEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVGKR-AAENILKIDPTNSAALVLL 584
E+ D ++ FD + ++L+ + ++ +G++ A+ ++ + + L
Sbjct: 324 KESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSL 383
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI--EIQTKIHASG 628
++YA GK+EE R+ + R VP + I +Q +H +G
Sbjct: 384 VDMYAKCGKFEEADRIFLRLSSRST--VPWTAMISANVQRGLHENG 427
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/577 (29%), Positives = 312/577 (54%), Gaps = 20/577 (3%)
Query: 65 VAFDFLQNNTNFRIRPSTYA-DLISACSSLRSLQLGRKVHDHI-LSSKCQPDAVLH--NH 120
V F + +NF P L+ + ++L+ GR +H H+ +++ D+ ++ N
Sbjct: 3 VKFTPFLSRSNFLASPHQDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNS 62
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMP 179
++N+Y KC + AR +FD MP+RNVVSW+A++AG QNG EL+ +M+ + + P
Sbjct: 63 LINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFP 122
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+++ + I +C V G+Q H + +KS H +NALI +Y+K + A +
Sbjct: 123 NEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQIL 181
Query: 240 SSIARKDITSWGSMIDGF-------SKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
++ DI + +++G +D + + +E N A++ TI AS +
Sbjct: 182 YTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDIT 241
Query: 293 EAMSLFSEMGDRELIPD---GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+ ++M ++ D G ++ + C + LS G + + S +
Sbjct: 242 LGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLS---GRTFFDRLQSRNVVSWTSIIA 298
Query: 350 AILQHQA-GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
A Q++ E LFS M P+ T + + A +++L +G QLH K+GL
Sbjct: 299 AYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKG 358
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+V V N L+ MY K G + +A+ +F+ M ++++W+++I G++ G G+EAL +F+ M
Sbjct: 359 NVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMM 418
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
++G RPN+VT +GV+ AC+H+ LV+EG + + ++ I+P E +C+V LL+R+GR+
Sbjct: 419 ATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRL 478
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EAE+F+ + D+V W++LL +C H + D G++ AE +L+++P + +LL N++
Sbjct: 479 DEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMH 538
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A +W+ V + M+ER V+K PG SW+EI+ H
Sbjct: 539 ARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAH 575
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/627 (29%), Positives = 312/627 (49%), Gaps = 78/627 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC--SSLRSLQLGRKVHDHIL 107
+ S+ + EAL F + ++ T+ ++ +C + L SL+ R +H I+
Sbjct: 82 MISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIV 141
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVF----DEMPQRNVVSWTAMIAGCSQNGQEN 163
+ + +A + +++ YGK GSL+DA VF DE P ++V+ +AMI+ C QNG
Sbjct: 142 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQ 201
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
++ L+ M G P T S++ ACS L VG + + + A+
Sbjct: 202 ESLRLFYAMNLEGTKPSGVTLVSVLNACSMLP-VG-------------SATAFVLEQAME 247
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
+ D +L + ++ AR + L AR F+ ++SP++ SWN + A
Sbjct: 248 VVSATRDNVLGT-TLLTTYARSN------------DLSRARATFDAIQSPDVVSWNAMAA 294
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS--PLSLYQ-GMQIHSYIIKKG 340
EA+ LF M + P T + L AC + P + G +I S + + G
Sbjct: 295 AYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAG 354
Query: 341 FYSNVPVCNAIL-------------------------------------QHQAG-ELFRL 362
+ V NA L H G E F L
Sbjct: 355 LEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFEL 414
Query: 363 FSLMLASQ-TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F M A + KP+ +TF V+ A + S+ G ++H ++ G D + N L++MY
Sbjct: 415 FQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYA 474
Query: 422 KCGSLGSARELFN--FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
KCGSL A+ +F+ DV++W+SL+ GYAQ+G E ALKLF M+ GVRPNH+T
Sbjct: 475 KCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITF 534
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+ LTAC+H G +E+G +L M ++GI+P + SC+VDLL R GR+ EAE + + +
Sbjct: 535 ISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS 594
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
D++ W +LL +CK ++ G+R AE I+++DP +++ ++L ++YA++G+W E A
Sbjct: 595 -QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAAT 653
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ +M ++G+R PG S +E+ ++H+
Sbjct: 654 IRKTMLDKGIRADPGCSAVEVNQELHS 680
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 251/539 (46%), Gaps = 79/539 (14%)
Query: 76 FRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
+RP+ +A L++ACS L +L GR++H I + ++VL N +++MY KCGSL D
Sbjct: 1 MEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 60
Query: 134 ARMVFDEMP---QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIR 189
A+ FD +P +R+VV+W AMI+ +NG A++L+ M G P+ TF S++
Sbjct: 61 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLD 120
Query: 190 AC--SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+C +GL + R +H ++ + + AL+ Y K + DAW VF RK
Sbjct: 121 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF---LRKS- 176
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+E S +L + + +I+ E++ LF M
Sbjct: 177 --------------------DEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTK 216
Query: 308 PDGLTVRSLLCACT-------SPLSLYQGMQIHS-------------------------- 334
P G+T+ S+L AC+ + L Q M++ S
Sbjct: 217 PSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARA 276
Query: 335 ---YIIKKGFYSNVPVCNAILQ-HQAGELFRLFSLMLASQTKPDHITFNDVMGACAA--- 387
I S + A LQ H+ E LF ML +P TF + ACAA
Sbjct: 277 TFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPP 336
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP--DVVSWS 445
+ +G ++ + + GL D V N ++MY KCGSL AR +F + D ++W+
Sbjct: 337 QTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWN 396
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQ 503
S++ Y G G+EA +LF+ M + V+PN VT V VL A + + +G +++ R++
Sbjct: 397 SMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVS 456
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVD 561
N G ++ ++++ A+ G + +A+ ++ + + +D++ W SL+A +G +
Sbjct: 457 N--GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAE 513
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 190/477 (39%), Gaps = 92/477 (19%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNFRIRPST 82
LD A EV FLR+ D+ L + S C QN + + + + N + T
Sbjct: 165 LDDAWEV---FLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVT 221
Query: 83 YADLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+++ACS L V + + D VL +L Y + L AR FD +
Sbjct: 222 LVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAI 281
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL---CCVG 198
+VVSW AM A Q+ + A+ L+ +ML G+ P TF + + AC+
Sbjct: 282 QSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASA 341
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA--RKDITSWGSMIDG 256
+G+++ + + ++ NA + MY K + DA VF I+ R+D +W SM+
Sbjct: 342 IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRS 315
+ + EA LF M +L+ P+ +T +
Sbjct: 402 YGHHGLGK----------------------------EAFELFQAMEAEKLVKPNKVTFVA 433
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---------------------- 353
+L A TS S+ QG +IH+ ++ GF S+ + NA+L
Sbjct: 434 VLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQ 493
Query: 354 ----------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
QA +LF M +P+HITF + AC LE G +L
Sbjct: 494 EDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCEL 553
Query: 398 HCYIMKTGLALDVFVMNG------LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+G+ D ++ ++D+ +CG L A +L DV++W +L+
Sbjct: 554 -----LSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 605
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 185/444 (41%), Gaps = 89/444 (20%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P+ +++ ACS L + GR++H+ + + + + NALI+MY+K ++DA
Sbjct: 5 PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64
Query: 239 FSSIAR---KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + R +D+ +W +MI F + AR EA+
Sbjct: 65 FDRLPRASKRDVVTWNAMISAFLRNGSAR----------------------------EAL 96
Query: 296 SLFSEMG-DRELIPDGLTVRSLLCACTSP--LSLYQGMQIHSYIIKKGF----------- 341
LF +M D P+ +T S+L +C LSL IH I+ G
Sbjct: 97 QLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALV 156
Query: 342 ------------------------YSNVPVCNAILQH--QAG---ELFRLFSLMLASQTK 372
+++ C+A++ Q G E RLF M TK
Sbjct: 157 DSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTK 216
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL-----DVFVMNGLMDMYVKCGSLG 427
P +T V+ AC+ L +G+ ++++ + + D + L+ Y + L
Sbjct: 217 PSGVTLVSVLNACSM---LPVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLS 272
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
AR F+ ++ PDVVSW+++ Y Q EAL LF RM GVRP+ T + LTAC+
Sbjct: 273 RARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACA 332
Query: 488 HVGLVEEGLQLYRI--MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA-FDDDI 544
RI + E G+ + +++ A+ G + +A +++ D
Sbjct: 333 AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDC 392
Query: 545 VVWKSLLASCKTHGNVDVGKRAAE 568
+ W S+LA+ HG +GK A E
Sbjct: 393 ITWNSMLAAYGHHG---LGKEAFE 413
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 312/596 (52%), Gaps = 56/596 (9%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILNMYGK 127
L+ + I P T I+ S + + RK+ D S ++++ + N+ +
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ--FTFG 185
DAR +FDEMP RN++SW +++G +NG+ + A +++ LMP++ ++
Sbjct: 66 -----DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVF------DLMPERNVVSWT 114
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
++++ V + L + + +S ++ + + RI DA ++ I K
Sbjct: 115 ALVKGYVHNGKVDVAESLFWKMPEKNK----VSWTVMLIGFLQDGRIDDACKLYEMIPDK 170
Query: 246 DITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
D + SMI G K +D AR +F+EM ++ +W T++ G + ++A +F M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 303 ---------------------DRELIPDGLTVRSLLCACTSPLS-LYQGMQIHSYIIKKG 340
D E + + + V+ ++ AC + +S L Q +I ++
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI-ACNAMISGLGQKGEIAK--ARRV 287
Query: 341 FYSNVPVCNAILQ-----HQAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
F S +A Q H+ E LF LM +P T ++ CA++ASL
Sbjct: 288 FDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G Q+H +++ +DV+V + LM MY+KCG L ++ +F+ D++ W+S+I GY
Sbjct: 348 HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 452 AQFGCGEEALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
A G GEEALK+F M SG +PN VT V L+ACS+ G+VEEGL++Y M++ +G+ P
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+C+VD+L RAGR +EA + I+ M + D VW SLL +C+TH +DV + A+ +
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++I+P NS +LL N+YAS G+W +VA L MK R VRK PG SW E++ K+HA
Sbjct: 528 IEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHA 583
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 157/375 (41%), Gaps = 50/375 (13%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D+A E+ D R W + + + N ++A FD + T +
Sbjct: 188 VDEAREIFDEMSERSVITWT-TMVTGYGQNNRVDDARKIFDVMPEKTE-----------V 235
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
S S L ++ D + P + N +++ G+ G + AR VFD M +RN
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
SW +I +NG E A++L++ M + G+ P T SI+ C+ L + G+Q+HA
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+++ + + + L+ MY K ++ + +F KDI W
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW--------------- 400
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG-DRELIPDGLTVRSLLCACTSPL 324
N+II+G AS EA+ +F EM P+ +T + L AC+
Sbjct: 401 -------------NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ +G++I+ + + + P+ C + +AG ++ + +PD +
Sbjct: 448 MVEEGLKIYESM--ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505
Query: 380 DVMGACAAMASLEMG 394
++GAC + L++
Sbjct: 506 SLLGACRTHSQLDVA 520
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 257/490 (52%), Gaps = 38/490 (7%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A +F ++PQ + W I G SQ+ A+ LY QM Q + PD FTF +++AC+
Sbjct: 60 ALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTK 119
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L V G +H V++ GS+++ +N L+ + K + A ++F + D+ +W ++
Sbjct: 120 LFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSAL 179
Query: 254 IDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
I G+++ L AR +F+EM +L SWN +I A LF E ++++
Sbjct: 180 IAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVS-- 237
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
N + +L++ E LF M
Sbjct: 238 --------------------------------WNALIGGYVLRNLNREALELFDEMCGVG 265
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCGSLGSA 429
PD +T ++ ACA + LE G ++H I++ L + N L+DMY KCG++G A
Sbjct: 266 ECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKA 325
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+F + D DVVSW+S+I G A G EE+L LFR M+ + V P+ VT VGVL ACSH
Sbjct: 326 VRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSHA 385
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
G V+EG + + +M+N+Y I PT CVVD+L RAG + EA +FI M + + +VW+S
Sbjct: 386 GNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPNAIVWRS 445
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LL +CK HG+V++ KRA E +L++ S VLL N+YAS G+W+ + M + GV
Sbjct: 446 LLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYASQGEWDGAENVRKLMDDNGV 505
Query: 610 RKVPGQSWIE 619
K G S++E
Sbjct: 506 TKNRGSSFVE 515
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 160/305 (52%), Gaps = 10/305 (3%)
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ +A +F ++ P+ WNT I G + + A++L+++M R + PD T +L A
Sbjct: 57 IRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKA 116
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKPDHIT 377
CT + G +H +++ GF SNV V N +L A G+L ++ + + K D +
Sbjct: 117 CTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDL-KVATDIFDDSDKGDVVA 175
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
++ ++ A L + +L + K D+ N ++ +Y K G + SAR LF+
Sbjct: 176 WSALIAGYAQRGDLSVARKLFDEMPKR----DLVSWNVMITVYTKHGEMESARRLFDEAP 231
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D+VSW++LI GY EAL+LF M G P+ VT++ +L+AC+ +G +E G +
Sbjct: 232 MKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEK 291
Query: 498 LY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
++ +I++ G + T + +VD+ A+ G + +A + + D D+V W S+++
Sbjct: 292 VHAKIIEMNKGKLSTL-LGNALVDMYAKCGNIGKAVR-VFWLIRDKDVVSWNSVISGLAF 349
Query: 557 HGNVD 561
HG+ +
Sbjct: 350 HGHAE 354
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ LI+ + L + RK+ D + + D V N ++ +Y K G +E AR +FDE P
Sbjct: 176 WSALIAGYAQRGDLSVARKLFDEM----PKRDLVSWNVMITVYTKHGEMESARRLFDEAP 231
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+++VSW A+I G A+EL+ +M G PD+ T S++ AC+ L + G +
Sbjct: 232 MKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEK 291
Query: 203 LHAHVIKSEHGS-HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+HA +I+ G + NAL+ MY K I A VF I KD+ SW
Sbjct: 292 VHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSW----------- 340
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N++I+G+A +A E++ LF EM ++ PD +T +L AC+
Sbjct: 341 -----------------NSVISGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACS 383
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHI 376
++ +G + + + K Y P C + +AG L F+ + + + +P+ I
Sbjct: 384 HAGNVDEGNRY--FHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPNAI 441
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMK-TGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+ ++GAC +E+ + + +++ G +V+ L ++Y G A +
Sbjct: 442 VWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVL--LSNVYASQGEWDGAENVRKL 499
Query: 436 MEDPDVVS 443
M+D V
Sbjct: 500 MDDNGVTK 507
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 166/416 (39%), Gaps = 116/416 (27%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P T+ ++ AC+ L + G VH +L + V+ N +L + KCG L+ A
Sbjct: 103 VKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVAT 162
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+FD+ + +VV+W+A+IAG +Q G + A +L+ +M +
Sbjct: 163 DIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPK--------------------- 201
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
L+S N +I +YTK + A +F KDI SW ++I
Sbjct: 202 ------------------RDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIG 243
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+ + R EA+ LF EM PD +T+ S
Sbjct: 244 GYVLRNLNR----------------------------EALELFDEMCGVGECPDEVTMLS 275
Query: 316 LLCACTSPLSLYQGMQIHSYIIK--KGFYS------------------------------ 343
LL AC L G ++H+ II+ KG S
Sbjct: 276 LLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDK 335
Query: 344 -----NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
N + A E LF M ++ PD +TF V+ AC+ +++ G + +
Sbjct: 336 DVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNR-Y 394
Query: 399 CYIMKTGLALDVFVMN--GLMDMYVKCGSLGSARELFNFME----DPDVVSWSSLI 448
++MK ++ + + ++DM + G L +E FNF+ +P+ + W SL+
Sbjct: 395 FHLMKNKYKIEPTIRHCGCVVDMLGRAGLL---KEAFNFIASMKIEPNAIVWRSLL 447
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 273/551 (49%), Gaps = 69/551 (12%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+L++Y KCG L DAR VFD MP RN+VSW A+IAG + + + A+EL+++M + G +PD
Sbjct: 132 LLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPD 191
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
TF ++ +G L RQLH ++K L++ NA I Y++ D + D+
Sbjct: 192 GTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADS----- 246
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
R +F+ +ES +L SWN+++ A +EAM F
Sbjct: 247 -----------------------RKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVR 283
Query: 301 MGDRELI-PDGLTVRSLLCACTS-PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------ 352
M I PD + S + C+ QG IHS +IK G PVCNA++
Sbjct: 284 MMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRF 343
Query: 353 -------------------------------QHQ--AGELFRLFSLMLASQTKPDHITFN 379
H + + + F M A + D +
Sbjct: 344 ADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLS 403
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+ +C+ +A L +G Q+H ++++G A + FV + L+ MY KCG LG AR+ F +
Sbjct: 404 AALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKS 463
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
V W+S++ GYAQ G + LF M V +HVT V ++TA SH GLV+EG ++
Sbjct: 464 SSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEIL 523
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M+ Y I E +C VDL RAG++ +A++ I M F D +VW +LL +C+ HGN
Sbjct: 524 NTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGN 583
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+++ A ++ +P + VLL ++Y+ G W + A + M+ R + K+PG SWIE
Sbjct: 584 MELASDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIE 643
Query: 620 IQTKIHASGND 630
++ ++H+ D
Sbjct: 644 VKNEVHSFNAD 654
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 220/557 (39%), Gaps = 81/557 (14%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +L Y G L AR VFDE+P + SW +++A G A L M GL
Sbjct: 30 NQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLA 88
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
F GS +R+ + LG QL + ++ ++ +AL+ +Y K R+ DA V
Sbjct: 89 ASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRV 148
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + ++I SW N IIAG EAM LF
Sbjct: 149 FDGMPVRNIVSW----------------------------NAIIAGYTDSRKPAEAMELF 180
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-- 356
EM +PDG T LL P Q+H I+K G + NA + +
Sbjct: 181 LEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQC 240
Query: 357 ----------------------------------GELFRLF-SLMLASQTKPDHITFNDV 381
E R F +M S +PD +F
Sbjct: 241 DALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSA 300
Query: 382 MGACAAMA-SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS---LGSARELFNFME 437
+ C+ + G +H ++K GL V N ++ MY + + A F+ +
Sbjct: 301 ISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLV 360
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
D VSW+S++ GY+ G +ALK FR MR+ +R + L L +CS + ++ G Q
Sbjct: 361 FKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQ 420
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++ ++ + G S ++ + ++ G + +A + A V W S++ H
Sbjct: 421 VHSLVV-QSGFASNDFVSSSLIFMYSKCGVLGDARKSFEE-ADKSSSVPWNSMMFGYAQH 478
Query: 558 GNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
G +L ++ P + V L Y+ G +E + ++ +M+ R K+P
Sbjct: 479 GQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETR--YKIP--- 533
Query: 617 WIEIQTKIHASGNDISG 633
++ + +A G D+ G
Sbjct: 534 ---MRMEHYACGVDLYG 547
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 191/594 (32%), Positives = 283/594 (47%), Gaps = 75/594 (12%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-SLE- 132
+F ++ + C S++ L +++H I+ + PDA L + C SL
Sbjct: 17 DFNPHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTIST-RLSALCAQSLPI 72
Query: 133 DARMVFDEMPQ---RNVVSWTAMIAG-CSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
D R + Q N+ + A+I G + N + +Y QML G++PD +T ++
Sbjct: 73 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 132
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+AC+ V G ++H IK S + N L+ MY D I A VF + ++D
Sbjct: 133 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRD-- 190
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
L SW T+I G A E + LF EM L
Sbjct: 191 --------------------------LVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQA 224
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIK---------------------------KGF 341
DG+T+ +L +C L G ++H YII+ +
Sbjct: 225 DGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKV 284
Query: 342 YSNVPVCNAI----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ +PV N + + Q E +F M KPD +T V+ +CA + L
Sbjct: 285 FQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVL 344
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E+G +H Y+ + + D F+ N L+DMY KCGS+ A +F M DV S++++IVG
Sbjct: 345 ELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGL 404
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A G G +AL LF M G+ P+ VT VGVLTACSHVGLVEEG + + M Y + P
Sbjct: 405 AMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQ 464
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E C+VDLL RAG ++EAE+FI M + D V +LL +CK HG V++G+ + I
Sbjct: 465 LEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIE 524
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
KI+P A VL+ NIY+S+ +W + +L +MKER + K PG S IE+ IH
Sbjct: 525 KIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIH 578
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 289/559 (51%), Gaps = 77/559 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N L + + G LE AR VFDEMP+R+VVSW MI+G G + A + +M ++G+
Sbjct: 780 NIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIR 839
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG-SHLISQNALIAMYTKFDRILDAWN 237
P FT+ +++ S C G+Q+HA +I++ S+++ N+LI MY KF +
Sbjct: 840 PSGFTYSTLLSFVSSAC---RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVV----- 891
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
D+A VF ME ++ SWN++I N A+
Sbjct: 892 -----------------------DYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQ 928
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV---------- 347
F M PD TV +++ C++ L +G QI + I+ GF SN V
Sbjct: 929 FVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSK 988
Query: 348 ---------------------CNAILQ----HQAGE-LFRLFSLMLASQTKPDHITFNDV 381
CNA++ H GE +LF L L +P T + V
Sbjct: 989 CNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIV 1048
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ A + + ++ G+Q+H ++K+GL DV V + L++MY K G + SA + F + D+
Sbjct: 1049 LSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDL 1108
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SW+++I+G A G +AL++F+ + G P+ +TL GVL AC+ GLV+EGL ++
Sbjct: 1109 ISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSS 1168
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M+ EYG+IP E +C+VD+++R G++ EA D + M + ++W SLL +C+ +G++
Sbjct: 1169 MEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLR 1228
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+R AE +++++P +S ++L Y G+WE + R+ +MKE+GVRKV G SWI I+
Sbjct: 1229 FTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWIGIK 1288
Query: 622 TKI---------HASGNDI 631
+ H G DI
Sbjct: 1289 NHVFVFKENQLLHIGGKDI 1307
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 279/585 (47%), Gaps = 97/585 (16%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
EA+ F L N R T+ A ++ AC++L +L G+++H I+ + + D+VL
Sbjct: 152 KEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLG 211
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRN-------------------------------VV 147
+ ++N+YGKCG ++ A V + M + + VV
Sbjct: 212 SSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVV 271
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
W +MI+G N + A+EL+ M + G+ D TF S++ ACS L + G Q+HAHV
Sbjct: 272 LWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHV 331
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
K + +I +AL+ MY+K R DA +FS + D SMI +S
Sbjct: 332 YKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYS--------- 382
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
+C ++A +F M + LI
Sbjct: 383 -------------------NCGRIDDARQIFDTMPSKSLI-------------------- 403
Query: 328 QGMQIHSYIIKKGFYSNV-PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
+S I+ GF N P+ E LF M + D + V+ ACA
Sbjct: 404 ---SWNSMIV--GFSQNACPI----------EALDLFCEMNKLGLRMDKFSLAGVISACA 448
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+++SLE+G Q+ GL D + L+D Y KCG + R+LF+ M D V W+S
Sbjct: 449 SISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNS 508
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+++GYA G G EAL +F +MRS GV+P +T VGVL+AC H GLVEEG + + M+ +Y
Sbjct: 509 MLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDY 568
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
I P E SC+VDL ARAG + +A + I QM D +W S+L C HGN +GK+
Sbjct: 569 HINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKV 628
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
A+ I+ +DP NS A V L IYA+ W A++ M ++ + K
Sbjct: 629 AKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPK 673
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 152/712 (21%), Positives = 276/712 (38%), Gaps = 138/712 (19%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C L++ ++ D ++ + W+ + EAL FD +++ ++
Sbjct: 480 DFYCKCGLVEHGRKLFDRMMKSDEVPWN-SMLMGYATNGHGIEALNVFDQMRS---VGVQ 535
Query: 80 PS--TYADLISACSSLRSLQLGRK-VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P+ T+ ++SAC ++ GRK + L P ++ ++++Y + G LEDA
Sbjct: 536 PTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMN 595
Query: 137 VFDEMPQRNVVS-WTAMIAGCSQNGQ----------------ENAAIELYVQMLQSGLMP 179
+ ++MP + S W++++ GC +G EN+ YVQ+ SG+
Sbjct: 596 LIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGA--YVQL--SGIYA 651
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS-----------QNALIAMYTK 228
+G + + + + + E L S QN ++ + +
Sbjct: 652 TFEDWGRSAQVRKLMYDKKIPKDTSFDIAGEEGXEGLSSETKEVTKMKQRQNLVLRLVAE 711
Query: 229 FDRILDAWNVFSSIARKDITSWGSMID-GFSKLDF-----------------ARTVFNEM 270
R D + AR+ + + +I GF+ F + VF ++
Sbjct: 712 KKRECDERDQKFMAARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDI 771
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI----------------------- 307
NL SWN + A +F EM R+++
Sbjct: 772 IDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFS 831
Query: 308 --------PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-YSNVPVCNAILQHQAG- 357
P G T +LL +S +G QIH+ +I+ G SNV V N+++
Sbjct: 832 EMQKAGIRPSGFTYSTLLSFVSSAC---RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKF 888
Query: 358 --------------EL---------------------FRLFSLMLASQTKPDHITFNDVM 382
EL R F LM + PD T + V+
Sbjct: 889 GVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVI 948
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
C+ + LE G Q+ ++ G + V + +D++ KC L + +F + D V
Sbjct: 949 TVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSV 1008
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+++I YA G GE AL+LF +RP TL VL+A S + V++G Q++ ++
Sbjct: 1009 LCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLV 1068
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
G+ S +V++ A+ G + A ++ D++ W +++ +G V
Sbjct: 1069 VKS-GLESDVIVASSLVEMYAKFGLIDSAMKTFAKIG-ARDLISWNTMIMGLAYNGRVSK 1126
Query: 563 GKRAAENIL----KIDPTNSAALVLLCNIYASSGKWEEVARLMGSM-KERGV 609
+ +L D A ++L CN+ G +E + SM KE GV
Sbjct: 1127 ALEIFKELLIGGPPPDEITLAGVLLACNV---GGLVDEGLSIFSSMEKEYGV 1175
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 278/542 (51%), Gaps = 65/542 (11%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++ Y + G +E AR VFD+ PQ V +W AMI S+ G A+ LY +M G+ PD
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
T+ +++AC+ + G + + +G + A++ +Y K
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKC----------- 153
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
K+D A VF++M +L W T+I G+A A EA+ ++ +
Sbjct: 154 -----------------GKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQ 196
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-------------------- 340
M + + DG+ + L+ ACT+ G+ IH Y+I+K
Sbjct: 197 MHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGH 256
Query: 341 -----------FYSNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
Y NV +A++ AG +L M + KPD ++ V+ A
Sbjct: 257 LELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLA 316
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
C+ + L++G +H YI++ L D ++DMY KCGSL AR +F+ + D +SW
Sbjct: 317 CSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISW 375
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+++I Y G GEEAL LF +MR + V+P+H T +L+A SH GLVE+G + IM N
Sbjct: 376 NAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVN 435
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
EY I P+ + +C+VDLL+RAGRV EA++ I M + I +W +LL+ C HG +G+
Sbjct: 436 EYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGE 495
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
AA+ +L+++P + L+ N +A++ +W+EVA + MK+ G++KVPG S +E+ K+
Sbjct: 496 MAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKL 555
Query: 625 HA 626
HA
Sbjct: 556 HA 557
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 191/612 (31%), Positives = 307/612 (50%), Gaps = 74/612 (12%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGK 127
L N+ F P+ LI CS + L +++H +L + D + ++
Sbjct: 27 LNNDRYFANHPTL--SLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSP 81
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGS 186
SL+ A+ VFD++P N+ +W +I + + + ++ ++++ML QS PD+FTF
Sbjct: 82 FPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPF 141
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+I+A S L + G+ H VIK GS + N+LI Y K + + VF +I R+D
Sbjct: 142 LIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRD 201
Query: 247 ITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS---------------- 287
+ SW SMI F + + A +F EME+ N+ + GV S
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHS 261
Query: 288 -----------------------CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
C + +A LF +M +++++ + T+ L
Sbjct: 262 YIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIV-----------SWTTML 310
Query: 325 SLYQGMQIHSYIIKKGFYSNVP-----VCNAILQ--HQAG---ELFRLF-SLMLASQTKP 373
Y +I Y +G + +P NA++ Q G E LF L L+ KP
Sbjct: 311 VGYA--KIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKP 368
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D +T + ACA + ++++G +H YI K G+ L+ + L+DMY KCG L A +F
Sbjct: 369 DEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVF 428
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ +E DV WS++I G A G G++A+ LF +M+ V+PN VT +L ACSHVGLVE
Sbjct: 429 HSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVE 488
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
EG + M+ YG++P + +C+VD+L RAG + EA + I +M VW +LL +
Sbjct: 489 EGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGA 548
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C H NV + ++A +++++P N A VLL NIYA +GKW+ V+ L M++ G++K P
Sbjct: 549 CTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEP 608
Query: 614 GQSWIEIQTKIH 625
G S IE+ +H
Sbjct: 609 GCSSIEVDGIVH 620
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 205/727 (28%), Positives = 331/727 (45%), Gaps = 118/727 (16%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C + +C D + V D+ ++ W+ + SS + LY+ L F + +
Sbjct: 120 CTRVITMYSMCGSPDDSRSVFDALRKKNLFQWN-AVISSYSRNELYHNVLEMFVKMITES 178
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
T+ ++ AC+ + +Q+G VH ++ ++ D + N +++ YG GS+ DA
Sbjct: 179 GLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDA 238
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS----GLMPDQFTFGSIIRA 190
VF MP+RN+VSW +MI S NG L QM++ PD T +++
Sbjct: 239 LRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPV 298
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ +G+G+ +H +K ++ NAL+ MY+K I DA +F K++ SW
Sbjct: 299 CARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSW 358
Query: 251 GSMIDGFS-------KLDFARTV---------------------FNEMESPNLASW---- 278
+M+ GFS D R + F E PNL
Sbjct: 359 NTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYS 418
Query: 279 -------------NTIIAGVASCSNANEAMSLFS-------------------------- 299
N +A A C + + A +F
Sbjct: 419 LKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLS 478
Query: 300 -----EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK---------------- 338
+M L+PD TV SLL AC+ SL G ++H II+
Sbjct: 479 LDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSL 538
Query: 339 -------------------KGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITF 378
K S + N LQ+ E LF M+ +P I+
Sbjct: 539 YIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISM 598
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V GAC+ + SL +G + H Y +K L + F+ ++DMY K GS+ + ++FN +++
Sbjct: 599 MSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKE 658
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
V SW+++++GY G +EA+KLF M+ +G P+ +T +GVLTAC+H GLV EGL
Sbjct: 659 RSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTY 718
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF-INQMAFDDDIVVWKSLLASCKTH 557
M+ +G+ PT + +CV+D+L RAG++ EA +M+ + + +W LL+SC+ H
Sbjct: 719 LDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIH 778
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N+++G++ A + +P VLL N+YA SGKW+EV ++ MKE +RK G SW
Sbjct: 779 KNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSW 838
Query: 618 IEIQTKI 624
IE+ K+
Sbjct: 839 IELNGKV 845
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 235/489 (48%), Gaps = 47/489 (9%)
Query: 94 RSLQLGRKVHDHIL-SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM 152
+ +QLGRK+H + S++ D VL ++ MY CGS +D+R VFD + ++N+ W A+
Sbjct: 95 KDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAV 154
Query: 153 IAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
I+ S+N + +E++V+M+ +SGL+PD FTF +++AC+G+ V +G +H V+K+
Sbjct: 155 ISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTR 214
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF---- 267
+ NAL++ Y + DA VF + +++ SW SMI FS + F
Sbjct: 215 LVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLG 274
Query: 268 NEME-------SPNLASWNTIIAGVA-----SCSNANEAMSLFSEMGDRELIPDGLTVRS 315
ME +P++A+ T++ A +++ + ++ + L
Sbjct: 275 QMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMY 334
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSL---MLA-- 368
C C + + I K NV N ++ AG++ + F L MLA
Sbjct: 335 SKCGCINDAQV---------IFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGG 385
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL-DVFVMNGLMDMYVKCGSLG 427
+ D +T + + C + L +LHCY +K + V N + Y KCGSL
Sbjct: 386 GDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLS 445
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A +F + V SW++LI GY+Q +L + +M+SSG+ P+ T+ +L+ACS
Sbjct: 446 YAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACS 505
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTR-ERRSCV----VDLLARAGRVHEAEDFINQMAFDD 542
+ ++ G +++ + II R ER S V + L G + A + M D
Sbjct: 506 QIKSLKLGKEVHGL------IIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAME-DK 558
Query: 543 DIVVWKSLL 551
+V W +++
Sbjct: 559 TLVSWNTMV 567
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 246/458 (53%), Gaps = 38/458 (8%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M+Q+ + P FTF S+++ACS + +G G +H H+ K SH+ Q AL+ Y +
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASC 288
I++A VF ++ +D+ +W +MI ++ + AR +F+EM N ASWN +I G +
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
N A LFS+M +R++I + + AC S
Sbjct: 121 RNVESAELLFSQMPNRDIIS-----WTTMIACYSQ------------------------- 150
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
Q E +F+ M + PD +T ++ ACA + +L++G ++H Y M+ G L
Sbjct: 151 ----NKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDL 206
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
DV++ + L+DMY KCGSL + +F + ++ W+S+I G A G EEAL +F RM+
Sbjct: 207 DVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQ 266
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
++PN VT + VL AC+H GLVEEG + + M ++ I P E C+VDLL +AG +
Sbjct: 267 REKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLL 326
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
+A + + M + + V+W +LL CK H N+ + + A ++P NS LL N+Y
Sbjct: 327 EDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMY 386
Query: 589 ASSGKWEEVARLMGSMKERGVRKV-PGQSWIEIQTKIH 625
A +W EVA + +MKE GV K PG SWIE+ KIH
Sbjct: 387 AEVNRWSEVANIRATMKELGVEKTSPGSSWIEMDRKIH 424
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 45/286 (15%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++ Y + ++E A ++F +MP R+++SWT MIA SQN Q A+ ++ +M +G+
Sbjct: 111 NAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGID 170
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
PD+ T +II AC+ L + LG+++H + ++ + +ALI MY K + + V
Sbjct: 171 PDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVV 230
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F + +K++ W N+II G+A A EA+++F
Sbjct: 231 FFKLRKKNLFCW----------------------------NSIIEGLAVHGYAEEALAMF 262
Query: 299 SEMGDRELIPDGLTVRSLLCACTSP----------LSLYQGMQIHSYIIKKGFYSNVPVC 348
S M ++ P+G+T S+L ACT LS+ + I I G C
Sbjct: 263 SRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYG-------C 315
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
L +AG L L+ + + +P+ + + ++G C +L++
Sbjct: 316 MVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIA 361
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 60 YNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
+ EAL F+ +Q N I P T A +ISAC+ L +L LG+++H + + D +
Sbjct: 154 FREALAVFNEMQTNG---IDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYI 210
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ +++MY KCGSL+ + +VF ++ ++N+ W ++I G + +G A+ ++ +M + +
Sbjct: 211 GSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKI 270
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQ 202
P+ TF S++ AC+ V GR+
Sbjct: 271 KPNGVTFISVLGACTHAGLVEEGRK 295
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 282/558 (50%), Gaps = 67/558 (12%)
Query: 107 LSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
L S C + V + +LNMY K G++ DA+ VFD M RN VSW AM++G + A
Sbjct: 149 LPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEA 208
Query: 166 IELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
EL+ MLQ L ++F +++ A S + +G QLH V+K + +N+L+
Sbjct: 209 FELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVT 268
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY K + +D A VF + N +W+ +I G
Sbjct: 269 MYAKAE----------------------------CMDAAMRVFGSSKERNSITWSAMITG 300
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
A AN A +F +M P T +L AC+ +L G Q H ++K GF +
Sbjct: 301 YAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQ 360
Query: 345 VPVCNAILQHQAG-------------------------------------ELFRLFSLML 367
V V +A++ A E L+S M
Sbjct: 361 VYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMD 420
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
P ++T V+ ACA +A+L++G QLH I+K +L V L MY KCG+L
Sbjct: 421 KQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLE 480
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
+ +F M D DV+SW+S+I ++Q G G +AL +F M+ G P+H+T + +L+ACS
Sbjct: 481 DSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACS 540
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H+GLV+ G +R M +Y +IPT + +C+VD+L+RAG++ EA+DFI+ + D +W
Sbjct: 541 HMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLW 600
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+ +L +C++ + DVG A E ++++ +S+A +LL NIYA+ KW +V R+ M+ R
Sbjct: 601 RIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLR 660
Query: 608 GVRKVPGQSWIEIQTKIH 625
GV K G SW+E+ ++H
Sbjct: 661 GVSKDLGCSWVELYNRVH 678
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 173/374 (46%), Gaps = 28/374 (7%)
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL--DAWNVFSSI--ARKDITSWGSMID 255
G LH +KS SH N+LI Y R L A+ VF+ I A +D+ SW S+++
Sbjct: 33 GEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLN 92
Query: 256 GFSK------LDFARTVFNEMES--PNLASWNTIIAGVASCSNANE-------AMSLFSE 300
S+ L R++ + E+ P+ S+ A +A+ A L S
Sbjct: 93 PLSRHHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSS 152
Query: 301 MGDRELIPDG--LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE 358
G + L + L A + ++ GM + + S + E
Sbjct: 153 CGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKC-----SEE 207
Query: 359 LFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
F LF LML + + V+ A + L MGTQLH ++K GL V V N L+
Sbjct: 208 AFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLV 267
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY K + +A +F ++ + ++WS++I GYAQ G A ++F +M SSG P
Sbjct: 268 TMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEF 327
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VGVL ACS +G + G Q + +M + G +S +VD+ A+ G + +A+D +Q
Sbjct: 328 TFVGVLNACSDMGALVVGKQTHCLMV-KLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQ 386
Query: 538 MAFDDDIVVWKSLL 551
+ DD+V+W +++
Sbjct: 387 LYDVDDVVLWTAMI 400
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 163/346 (47%), Gaps = 41/346 (11%)
Query: 69 FLQ-NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
FLQ +++ F T+ +++ACS + +L +G++ H ++ + + + +++MY K
Sbjct: 314 FLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAK 373
Query: 128 CGSLEDARMVFDEMPQ-RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
CG + DA+ F ++ +VV WTAMI G QNG+ A+ LY +M + G++P T S
Sbjct: 374 CGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTS 433
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++RAC+ L + LG+QLHA ++K AL MY+K + D+ VF + +D
Sbjct: 434 VLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRD 493
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
+ SW S+I FS+ ++A+ +F EM
Sbjct: 494 VISWNSIISVFSQH----------------------------GRGSDALDMFEEMKLEGT 525
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFR 361
PD +T +LL AC+ + +G + K Y+ +P C + +AG+L
Sbjct: 526 APDHITFINLLSACSHMGLVDRGWFYFRAMTKD--YNLIPTLDHYACMVDILSRAGQLKE 583
Query: 362 LFSLMLASQTKPDHIT--FNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ DH T + V+GAC ++ ++G +M+ G
Sbjct: 584 AKDFI--DSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELG 627
>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 290/544 (53%), Gaps = 67/544 (12%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++MY +CG DA VFDE+ + +VVSWT I G + +G E A+EL+ +L GL
Sbjct: 13 NAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERI-GTASDGHE--AVELFRIVLSLGLD 69
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
+++T +++ G+ + G+Q+ A K+ + + NAL++MY K +I DA V
Sbjct: 70 VNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRV 129
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F ++ +D SW N++I+ + N+A+ +F
Sbjct: 130 FYNMIIRDSVSW----------------------------NSLISACSENGFVNQALEVF 161
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV----------C 348
+M + L P T+ S+L A ++ + Q +QIHS ++K GF +V + C
Sbjct: 162 YQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRC 221
Query: 349 NAI--------------LQH---------QAG---ELFRLFSLMLASQTKPDHITFNDVM 382
N++ L H +AG + L+ + + K D TF+ ++
Sbjct: 222 NSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIIL 281
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
AC+A+ +++G +H ++KTG D FV + ++D+Y KCGS+G A + F +
Sbjct: 282 KACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLA 341
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+W+++++GYA GC +E LF +M G+ P+ +T +GVL++C H GLV+E M
Sbjct: 342 AWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVLSSCCHGGLVKEARHYLDSM 401
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+GIIP E +C++DLL R G + +A+ I+ M D+ +W+ LL++C HG+V++
Sbjct: 402 FELHGIIPHLEHYACMIDLLGRVGLLEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVEL 461
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
G+ AA +L+I P N +A +LL N+YAS G W V RL MKE+ +RK PG SWI++
Sbjct: 462 GRVAARKLLEIHPENESAYILLSNLYASVGMWNAVGRLRKEMKEKNLRKEPGSSWIQVGR 521
Query: 623 KIHA 626
K H
Sbjct: 522 KSHT 525
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ ++ + Y +AL + + + + ++ T++ ++ ACS++ +QLGR VH +L +
Sbjct: 245 MITTFVRAGYYTDALALYQTIWS-LHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKT 303
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
D+ + + ++++Y KCGS+ A F ++ +W AM+ G + +G +L+
Sbjct: 304 GFDQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLF 363
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+M Q G+ PD+ T+ ++ +C C GL ++
Sbjct: 364 NKMSQFGIEPDEITYLGVLSSC---CHGGLVKE 393
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 124/277 (44%), Gaps = 34/277 (12%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVH 103
W+ L S+ + N+AL F ++ ++P+ T A ++ A S+ + + ++H
Sbjct: 141 WN-SLISACSENGFVNQALEVFYQMRE---LSLQPTIHTLASILEAVSNSNNTKQVIQIH 196
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
++ D + + ++ YG+C S+++++ VF E+ + N+V MI + G
Sbjct: 197 SLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYT 256
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A+ LY + D TF I++ACS + + LGR +H+ V+K+ ++++I
Sbjct: 257 DALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVI 316
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
+Y K I A F S + + +W +M+ G++ + VF+
Sbjct: 317 DIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFD--------------- 361
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
LF++M + PD +T +L +C
Sbjct: 362 -------------LFNKMSQFGIEPDEITYLGVLSSC 385
>gi|110741296|dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
Length = 727
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 292/600 (48%), Gaps = 93/600 (15%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKC--QPDAVLHNHILNMYGKCGSLEDARMVFDE 140
YA L AC+ R+L G +H H+LS + +L N ++NMY KCG++ AR VFD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RNVVSWTA+I G Q G E L+ ML S P++FT S++ +C G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCR----YEPG 176
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H +K + NA+I+MY G DG +
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMY------------------------GRCHDGAAAY 212
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ A TVF ++ NL +WN++IA C+ +A+ +F M + G +LL C
Sbjct: 213 E-AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRATLLNIC 268
Query: 321 TSPLSLYQG------------MQIHSYIIKKGFYSNVPVCNAILQ--------------- 353
+S LY+ +Q+HS +K G + V A+++
Sbjct: 269 SS---LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKL 325
Query: 354 ----------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ LF + + PD TF+ V+ ACA + +
Sbjct: 326 FMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+H ++K G D + N L+ Y KCGSL +F+ M+ DVVSW+S++ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+ G + L +F++M + P+ T + +L+ACSH G VEEGL+++R M + +P
Sbjct: 446 SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
+CV+D+L+RA R EAE+ I QM D D VVW +LL SC+ HGN +GK AA+ +
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 572 K-IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH--ASG 628
+ ++PTNS + + + NIY + G + E + M+ VRK P SW EI K+H ASG
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASG 622
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ ++ AC+ L + + +H ++ D VL+N +++ Y KCGSL+ VFD+M
Sbjct: 371 TFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDM 430
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG- 200
R+VVSW +M+ S +GQ ++ + ++ +M + PD TF +++ ACS V G
Sbjct: 431 DSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGL 487
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMI 254
R + K E L +I M ++ +R +A V + D W +++
Sbjct: 488 RIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 295/549 (53%), Gaps = 43/549 (7%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +LI + +L G+ +H ++ S + +++ Y + L R +FD +
Sbjct: 31 TFDELIKTYTRDHALNQGKHLHARLIVSGLASSNNFASKLISFYTETRQLSIVRKLFDRI 90
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+ N T +I S++G ++++ +M L P++F S++RAC + + G+
Sbjct: 91 PKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHVFDLQTGK 150
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH+ +++ S ++ ALI MY++ + A VF + KD+ + +M+ G+++
Sbjct: 151 ILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMVLGYAQNG 210
Query: 262 FARTVFNEME-------SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
FA+ F +E PNL +WNT+I+G F++ GD+ ++ +
Sbjct: 211 FAKEGFLLVEQMQMLDIKPNLVTWNTLISG-------------FAQAGDKVMVQE----- 252
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL-FRLFSLMLASQTKP 373
L+ M +H + + S V + +Q+ E F F ML P
Sbjct: 253 -----------LFGLMSMHGF--EPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYP 299
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+ T + ++ ACA++A++ G +LH Y G+ D++V + ++DMY KCG + AR LF
Sbjct: 300 NSATISSLLPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLF 359
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLV 492
+ M + V+W+S+I GYA G +EA++LF +M ++ + +H++ VLTACSH LV
Sbjct: 360 SKMPERHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLV 419
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E G L+ +M +Y I+P E +C++DLL RAG++ EA D I M + D+ VW +LL
Sbjct: 420 ELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALLG 479
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARL-MGSMKERGVRK 611
+C+ HG +D+ + AA ++ +++P N+ +LL N+YA +G WE VA+L MG K + +RK
Sbjct: 480 ACRQHGEIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLKMG--KRKRLRK 537
Query: 612 VPGQSWIEI 620
SWI++
Sbjct: 538 FSAYSWIQL 546
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 176/400 (44%), Gaps = 65/400 (16%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHIL 107
L + + Y + L F +QN R+RP+ + ++ AC + LQ G+ +H IL
Sbjct: 101 LIGAYSRHGFYQDVLDVFSEMQNE---RLRPNKFVIPSVLRACGHVFDLQTGKILHSVIL 157
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ D V++ +++MY +C +E AR VFD M ++++V+ AM+ G +QNG
Sbjct: 158 RHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMVLGYAQNGFAKEGFL 217
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVG---LGRQLHAHVIKSEHG--SHLISQNAL 222
L QM + P+ T+ ++I SG G + ++L + S HG +IS ++
Sbjct: 218 LVEQMQMLDIKPNLVTWNTLI---SGFAQAGDKVMVQELFG--LMSMHGFEPDVISWTSV 272
Query: 223 IAMYTKFDRILDAWNVFSSI---------------------------------------A 243
I+ + + A+ F +
Sbjct: 273 ISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGRELHGYAFAIGV 332
Query: 244 RKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+DI +++D +SK + AR +F++M + +WN++I G A+ +EA+ LF++
Sbjct: 333 EEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMIFGYANHGYCDEAIELFNQ 392
Query: 301 MGDRELIP-DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQH 354
M E D L+ ++L AC+ + G + +++ Y VP C L
Sbjct: 393 MEKTEAKKIDHLSFTAVLTACSHGRLVELGQSL--FLLMHEKYKIVPRLEHYACMIDLLG 450
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+AG+L + ++ +PD + ++GAC +++
Sbjct: 451 RAGKLSEAYDMIKTMPVEPDLFVWGALLGACRQHGEIDLA 490
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 272/535 (50%), Gaps = 62/535 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L AC+ + + GRK+H H L + + N +++MY CG L A+ +FD M R+
Sbjct: 122 LFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRD 181
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+VSW +I G SQ + + L+ M + + D T II ACS L +
Sbjct: 182 LVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVK 241
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++ ++ + N LI MY R+ + + A+
Sbjct: 242 YIKENNLEIDVYLGNTLIDMY----------------GRRSLA------------ELAQG 273
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
VF+ M N+ SWN ++ G A N A LF M R++I + TS ++
Sbjct: 274 VFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVI-----------SWTSMIT 322
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
Y Q + +LF M+A++ KPD +T V+ AC
Sbjct: 323 GYSQAS-----------------------QFSDAVKLFQEMMAAKVKPDKVTVASVLSAC 359
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A + L++G +H YI + G+ D++V N L+DMY KCG + A E+F+ M+D D VSW+
Sbjct: 360 AHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWT 419
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
S+I G A G AL LF +M GV+P H T VG+L AC+H GLV +GL+ + M++
Sbjct: 420 SVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESV 479
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
+G++P + CVVDLL+R+G + +A +FI +M D+VVW+ LL++CK HGNV + +
Sbjct: 480 HGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEI 539
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
A + +L++DP +S VLL N YA +W++ ++ M++ V+K G S IE+
Sbjct: 540 ATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEV 594
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 184/463 (39%), Gaps = 83/463 (17%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ +C L A ++ D L R W+ L + N Y E L FD + N +
Sbjct: 161 YAMCGQLGFAQKMFDGMLDRDLVSWN-TLICGYSQYNKYKEVLRLFDAM-TAANIKADAV 218
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T +I ACS L + + +I + + D L N +++MYG+ E A+ VFD M
Sbjct: 219 TMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRM 278
Query: 142 PQRN-------------------------------VVSWTAMIAGCSQNGQENAAIELYV 170
+RN V+SWT+MI G SQ Q + A++L+
Sbjct: 279 RERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQ 338
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M+ + + PD+ T S++ AC+ L + +G +H ++ + + + N+LI MY K
Sbjct: 339 EMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCG 398
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ A VF + KD SW S+I G + F
Sbjct: 399 MVEKALEVFHRMKDKDSVSWTSVISGLAVNGF---------------------------- 430
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP------LSLYQGMQ-IHSYIIKKGFYS 343
AN A+ LFS+M + P T +L AC L ++ M+ +H + Y
Sbjct: 431 ANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYG 490
Query: 344 NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
C L ++G + + + + PD + + ++ AC L L K
Sbjct: 491 ----CVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSAC----KLHGNVVLAEIATK 542
Query: 404 TGLALDV-----FVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
L LD +V+ L + Y A ++ MED DV
Sbjct: 543 RLLELDPCDSGNYVL--LSNTYAGVDRWDDAMKMRELMEDSDV 583
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMY-VKCGSLGSARELFNFMEDPDVVSWSSLI 448
S + +LH ++++T L D F+M+ ++ Y + +L A +FN +E P +V W+ +I
Sbjct: 29 STDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMI 88
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
G +Q EA+ ++ RM G+ N++TL+ + AC+ V + G +++ + + G
Sbjct: 89 RGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIH-VHALKLGF 147
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR--- 565
+ ++ + A G++ A+ + M D D+V W +L+ + R
Sbjct: 148 ESYLFVSNALIHMYAMCGQLGFAQKMFDGM-LDRDLVSWNTLICGYSQYNKYKEVLRLFD 206
Query: 566 --AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
A NI K D ++L C + G WE ++ +KE
Sbjct: 207 AMTAANI-KADAVTMVKIILAC---SHLGDWEFADSMVKYIKE 245
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 297/579 (51%), Gaps = 67/579 (11%)
Query: 86 LISACSSLRSLQLGRKVHDH-ILSSKCQPDAVLH-NHILNMYGKCGSLEDARMVFDEMPQ 143
L+ + ++L+ G+ +H H I++++ D ++ N ++N+Y KC + AR++FD M +
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLGRQ 202
RNVVSW A++AG NG + L+ M+ M P+++ F +II +CS V G Q
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
H + +KS H +NALI MY++ R D+
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSR---------------RSDVKG------------- 182
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A +V+ E+ ++ S+N II G+ +EA+ + M D ++ D +T + C+
Sbjct: 183 AMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSH 242
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------------- 353
L G+Q+H + + G + V +AI+
Sbjct: 243 LKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAI 302
Query: 354 ----HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
Q G E F M P+ TF ++ +CA +++L G LH I K+G
Sbjct: 303 LAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGF 362
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+ V N L++MY K GS+ +A ++F M D ++WS++I G + G G EAL +F+
Sbjct: 363 EDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQE 422
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M ++ P++VT VGVL+AC+H+G V+EG + + GI P E +C+V LL +AG
Sbjct: 423 MLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAG 482
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
R+ EAE+F+ D+V W++LL++C H N +GK+ AE +L++DP + +LL N
Sbjct: 483 RLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSN 542
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+YA + +W+ V ++ M+ER V+K PG SWIEI+ IH
Sbjct: 543 MYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIH 581
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 174/363 (47%), Gaps = 32/363 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY CS L+ L+LG +VH + + + D+ + + I++MYGKCG++ +AR VF+ +
Sbjct: 232 TYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRL 291
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+NVVSWTA++A SQNG A+ + +M GL+P+++TF ++ +C+G+ +G G+
Sbjct: 292 QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGK 351
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH + KS H+I NALI MY+K I A VF + +D +W +MI G S
Sbjct: 352 LLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHG 411
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
R EA+ +F EM + P +T +L AC
Sbjct: 412 LGR----------------------------EALVVFQEMLAAKECPHYVTFVGVLSACA 443
Query: 322 SPLSLYQGMQIHSYIIKK-GFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
S+ +G + ++K+ G V C L +AG L + M ++ K D + +
Sbjct: 444 HLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAW 503
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
++ AC + +G ++ +++ DV L +MY K ++ M +
Sbjct: 504 RTLLSACHVHQNYGLGKKVAELVLQMDPG-DVGTYILLSNMYAKAKRWDGVVKIRKLMRE 562
Query: 439 PDV 441
+V
Sbjct: 563 RNV 565
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 192/441 (43%), Gaps = 77/441 (17%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP+ Y A +IS+CS + G + H + L S + N ++ MY + ++ A
Sbjct: 125 MRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAM 184
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
V+ E+P +V S+ +I G +NG + A+E+ +M+ ++ D T+ + CS L
Sbjct: 185 SVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLK 244
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ LG Q+H + ++ +A+I MY K IL+A VF+ + K++ SW +++
Sbjct: 245 DLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILA 304
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+S+ C EA++ F EM L+P+ T
Sbjct: 305 AYSQ--------------------------NGC--FEEALNFFPEMEVDGLLPNEYTFAV 336
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------- 352
LL +C +L G +H+ I K GF ++ V NA++
Sbjct: 337 LLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRD 396
Query: 353 ------------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
H G E +F MLA++ P ++TF V+ ACA + S++ G
Sbjct: 397 SITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLN 456
Query: 400 YIMK-TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP----DVVSWSSLIVG---Y 451
+MK TG+ V ++ + K G L A NFM+ DVV+W +L+ +
Sbjct: 457 QLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAE---NFMKSTPVKWDVVAWRTLLSACHVH 513
Query: 452 AQFGCGEEALKLFRRMRSSGV 472
+G G++ +L +M V
Sbjct: 514 QNYGLGKKVAELVLQMDPGDV 534
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 290/559 (51%), Gaps = 66/559 (11%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G +H + D + + ++N YG S+++A VF+EM +R+VVSWT+MI+ C+Q
Sbjct: 140 GDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQ 199
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G + +++ +M G++P++ T S++ AC V GR ++ V K + +
Sbjct: 200 CGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDI 259
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
+NALI+MYTK + DA F ++ + ++K SW
Sbjct: 260 RNALISMYTKCGCLSDALEAFQAMPAR-----------YTK-----------------SW 291
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
NT+I G EA+ +F EM + PDG+T+ S+L AC L +GM +HSYI
Sbjct: 292 NTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKD 351
Query: 339 KGF-------------YSN-----------------------VPVCNAILQHQAGELFRL 362
G Y+ V VC + HQ F L
Sbjct: 352 NGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNL 411
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M ++ + ++ AC+ + +L+ G ++H YI + +A D+ + + L+DMY K
Sbjct: 412 FEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAK 471
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVG 481
CG + +A E+F M+ +SW+++I G A G G+EA++LF +M +P+ +TL
Sbjct: 472 CGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKA 531
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL AC+HVG+V+EGL+ + +M + G++P E C+VDLL RAG + EA FI +M +
Sbjct: 532 VLGACAHVGMVDEGLRYFYLMSS-LGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIE 590
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ V+W SLLA+C+ H +D+GK ++I+ + P + VL+ N++A +W++V +
Sbjct: 591 PNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVR 650
Query: 602 GSMKERGVRKVPGQSWIEI 620
G M RG+ K PG S +++
Sbjct: 651 GLMGSRGIEKTPGHSSVQV 669
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 230/524 (43%), Gaps = 78/524 (14%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED---ARMVFDEMPQ 143
+ AC+S L ++H ++ + D+ + ++ + + D AR VFD M Q
Sbjct: 24 LDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQ 80
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS---GLCCVGLG 200
N W MI G S A+ ++ +M + G+ PD +T +++ A + GL G
Sbjct: 81 PNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNG 140
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+HA V + S + + L+ Y F + +A VF + +D+
Sbjct: 141 DAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVV------------ 188
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
SW ++I+ A C + ++ + + SEM +IP+ +T+ SLL AC
Sbjct: 189 ----------------SWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSAC 232
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
++ +G +++ + K G ++V + NA++
Sbjct: 233 GQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWN 292
Query: 353 --------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
H+ E R+F ML PD IT V+ ACA + L G +H YI
Sbjct: 293 TLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDN 352
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G+ D + N L++MY KCG + +A +F M DVVSW+ ++ GY + A LF
Sbjct: 353 GICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLF 412
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M+ + V + + LV +L+ACS +G +++G +++ ++ E + S +VD+ A+
Sbjct: 413 EEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIE-EMNVAKDLCLESALVDMYAK 471
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
G + A + +M + W +++ ++G GK A E
Sbjct: 472 CGCIDTASEIFRKMQHKQTL-SWNAMIGGLASNG---YGKEAVE 511
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 173/389 (44%), Gaps = 37/389 (9%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFD--FLQNNTNFRIR 79
+ C L A E + R+ W+ L + + + EAL F+ L T I
Sbjct: 267 YTKCGCLSDALEAFQAMPARYTKSWN-TLIDGFVQNHEHKEALRIFEEMLLHGVTPDGI- 324
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T ++SAC+ L L+ G VH +I + D +L N ++NMY KCG + A VF
Sbjct: 325 --TLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQ 382
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M +++VVSWT M+ G + Q A L+ +M + ++ + S++ ACS L +
Sbjct: 383 TMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDK 442
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR++H+++ + L ++AL+ MY K I A +F + K SW
Sbjct: 443 GREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSW--------- 493
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD-RELIPDGLTVRSLLC 318
N +I G+AS EA+ LF +M + ++ PDG+T++++L
Sbjct: 494 -------------------NAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLG 534
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHI 376
AC + +G++ + G + C L +AG L F + +P+ +
Sbjct: 535 ACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPV 594
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ ++ AC +++G + +I+
Sbjct: 595 IWGSLLAACRVHHRMDLGKVIGQHIVNVA 623
>gi|297796913|ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312176|gb|EFH42600.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 292/545 (53%), Gaps = 37/545 (6%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+Y +LI A S R L G +H H+++S + +++ Y +CG + DAR VFDEM
Sbjct: 18 SYVELIEANSRDRLLCGGIVLHAHLVTSGIARLTRIAAKLVSFYVECGKVLDARKVFDEM 77
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R++ W MI C++ G +++++ +M + GL D F S+++A L G+
Sbjct: 78 PKRDISGWVVMIGACARYGYYQESLDIFREMNKEGLKLDVFIVPSLLKASRNLLDREFGK 137
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---S 258
+H V+K S ++LI MY+KF +++A VF + +D+ + +MI G+ S
Sbjct: 138 MIHCLVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFDDLGEQDLVVFNAMISGYANNS 197
Query: 259 KLDFARTVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+ D A + +M+ P++ +WN +I+G FS MG+ E + + +
Sbjct: 198 QADEALNLVKDMKLLGIKPDIITWNALISG-------------FSHMGNEEKVSE---IL 241
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
L+C L Y + I G N Q + F F ML P+
Sbjct: 242 ELMC-----LDGYMPDVVSWTSIISGLVHNF---------QNEKAFDAFKQMLTHGLYPN 287
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
T ++ AC +A+++ G ++H Y + TGL FV + L+DMY KCG + A LF
Sbjct: 288 SATITTLLPACTTLANMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR 347
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
V+++S+I YA G ++A++LF +M ++G + +H+T +LTACSH GL +
Sbjct: 348 KTPKKTTVTFNSMIFCYANHGLSDKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDL 407
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G L+ +MQ +Y I P E +C+VDLL RAG++ EA + + M + D+ VW +LL +C
Sbjct: 408 GQNLFHLMQTKYRIEPRLEHYACMVDLLGRAGKLVEAYEMMKTMRMEPDLFVWGALLGAC 467
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ HGN+++ + AA+ + +++P NS +LL ++YA G WE V R+ +K++ R+ G
Sbjct: 468 RNHGNMELARIAAKRLAELEPENSGNGLLLTSLYADVGSWENVIRMKKMIKKKRFRRFLG 527
Query: 615 QSWIE 619
SW+E
Sbjct: 528 SSWVE 532
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 106/202 (52%), Gaps = 6/202 (2%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
N NE AFD + + P +T L+ AC++L +++ G+++H + + + +
Sbjct: 265 HNFQNEK--AFDAFKQMLTHGLYPNSATITTLLPACTTLANMKHGKEIHGYSVVTGLEDH 322
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ + +L+MYGKCG + +A ++F + P++ V++ +MI + +G + A+EL+ QM
Sbjct: 323 GFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLSDKAVELFDQMEA 382
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQL-HAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+G D TF +I+ ACS LG+ L H K L ++ + + +++
Sbjct: 383 TGEKLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKYRIEPRLEHYACMVDLLGRAGKLV 442
Query: 234 DAWNVFSSI-ARKDITSWGSMI 254
+A+ + ++ D+ WG+++
Sbjct: 443 EAYEMMKTMRMEPDLFVWGALL 464
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 307/613 (50%), Gaps = 62/613 (10%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
N F R + + +S+ S R +H H N++L +Y K +L+
Sbjct: 25 NFPFHSRSRQPCSFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLD 84
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
A +FDE+ +N +WT +I+G ++ G L+ +M G P+Q+T S+++ C
Sbjct: 85 HAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCC 144
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
S + G+ +HA ++++ G ++ +N+++ +Y K A + F + KD+ SW
Sbjct: 145 SRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWN 204
Query: 252 SMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDREL 306
MI + + ++ + +F + ++ SWNTII G+ C A+ M E
Sbjct: 205 IMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEF 264
Query: 307 IPDGLTVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYS---------------------- 343
P ++ +L S LSL + G Q+H ++ G S
Sbjct: 265 SPVTFSIALIL---VSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKAS 321
Query: 344 ----NVP--------------------------VCNAILQHQAGELFRLFSLMLASQTKP 373
+VP V + + + + F M+
Sbjct: 322 TILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVV 381
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D T ++ ACA LE G Q+H YI K GL +D +V + L+DMY K GSL A +F
Sbjct: 382 DIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIF 441
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+++P+VV W+S+I G A G G+EA+ LF M + G+ PN VT VGVL ACSHVGL+E
Sbjct: 442 EQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIE 501
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
EG + +R+M++ Y I P E + +V+L RAG + EA++FI + + VW+S L+S
Sbjct: 502 EGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSS 561
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C+ H N ++GK +E +L+ P++ A +LL N+ +S+ +W+E A + M +RGV+K P
Sbjct: 562 CRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQP 621
Query: 614 GQSWIEIQTKIHA 626
GQSW++++ +IH+
Sbjct: 622 GQSWVQLKDQIHS 634
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 279/554 (50%), Gaps = 75/554 (13%)
Query: 78 IRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P T A ++ AC SL L+ G+ VH H++ S + D V ++NMY KCG++ +AR
Sbjct: 414 VMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLV-GISLVNMYAKCGTVGEAR 472
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFD + R+ + W +MI Q + A+ L+ +M G+ PD+ TF +++ AC
Sbjct: 473 KVFDRINNRSRILWNSMITA-YQEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAA 531
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ GR +H ++ S + + AL MY K + +A VF S+ +D+ S
Sbjct: 532 DLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVS------ 585
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
WN +IA + A+SL M + PD T S
Sbjct: 586 ----------------------WNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTS 623
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------- 352
LL AC+ P L G QIHS+I + +++ + ++
Sbjct: 624 LLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNS 683
Query: 353 -QH---------------QAGEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
QH Q GE L+ M + Q + D +TF V+ ACA ++ L
Sbjct: 684 RQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQ 743
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G +H +M+ GLA DV V N ++ MY KCGS A +F + D+ W++LI YA+
Sbjct: 744 GQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYAR 803
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G GE+AL +FRR+R G+ +++T V +L+ACSHVGL+EEG + + M E GI P E
Sbjct: 804 HGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMA-ELGIEPNME 862
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
SC+VDLLARAG +H AE+F+++M + +V +LLA+C+ HG+V+ +R AE + +
Sbjct: 863 HHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEKLEAL 922
Query: 574 DPTNSAALVLLCNI 587
DP + A V L NI
Sbjct: 923 DPESEAPYVTLSNI 936
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/576 (27%), Positives = 263/576 (45%), Gaps = 84/576 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++S C + L+ GR++H ++ S + V+ N +L MY +C S ED+R +FD M
Sbjct: 318 TFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRM 377
Query: 142 PQRNVVSWTAMIAGCSQNGQE-NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
R+ VSW+ +I CS+ A+ LY ML G+MP ++ AC L + G
Sbjct: 378 SVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGG 437
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+ +HAHVI+S L+ +L+ MY K + +A VF I + W SMI + +
Sbjct: 438 KLVHAHVIESGLEGDLVGI-SLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEK 496
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
D +EA+ LF EM + PD +T ++L AC
Sbjct: 497 D-----------------------------PHEALHLFREMQPEGVSPDRITFMTVLNAC 527
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQT---- 371
+ L G IH+ I+ GF ++V V A+ A GE +F M+
Sbjct: 528 VNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWN 587
Query: 372 ---------------------------KPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+PD TF ++ AC+ L G Q+H +I ++
Sbjct: 588 NMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAES 647
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFM------EDPDVVSWSSLIVGYAQFGCGE 458
L D+ ++ GL+ MY CGSL +ARE+F+ + D+ W+S+I Y Q G
Sbjct: 648 RLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYR 707
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSC 517
+AL+L+ +M S V + VT + VL AC+H+ + +G ++ R+M+ G+ +
Sbjct: 708 KALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRR--GLATDVAVANS 765
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD----VGKRAAENILKI 573
+V + + G EA + + DI +W +L+AS HG+ + + +R ++ +++
Sbjct: 766 IVFMYGKCGSFDEA-SIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIEL 824
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
A++ C + G EE SM E G+
Sbjct: 825 SNLTFVAMLSAC---SHVGLIEEGCEFFASMAELGI 857
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 250/516 (48%), Gaps = 80/516 (15%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM-VFDE 140
T+ ++S C + L+ GR++H ++ S + V+ N +L MY +C S ED+RM F
Sbjct: 113 TFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFAR 172
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M +R+VVSWT MI SQ+G+ + +I+L+ +ML G P+ TF SI+ C + G
Sbjct: 173 MKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQG 232
Query: 201 RQLHAHVIKSEHGSHLI--SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
RQ+HA V++S SHL N I MY K + A F+ + R+D+ SW MI +S
Sbjct: 233 RQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYS 292
Query: 259 ---KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
K + +F EM ++ G A P+ +T S
Sbjct: 293 QDGKFSLSLQLFREM----------LLEGTA---------------------PNSVTFVS 321
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------- 352
+L C +P L QG QIH+ +++ S+V V N++L
Sbjct: 322 ILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRD 381
Query: 353 --------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+ L+ ML P + + V+ AC ++A L+ G +H
Sbjct: 382 SVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVH 441
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
+++++GL D+ ++ L++MY KCG++G AR++F+ + + + W+S+I Y Q
Sbjct: 442 AHVIESGLEGDLVGIS-LVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAY-QEKDPH 499
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSC 517
EAL LFR M+ GV P+ +T + VL AC + +E G ++ RI+ + G +
Sbjct: 500 EALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDS--GFAADVRVATA 557
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ ++ A+ G + EA + M F D+V W +++A+
Sbjct: 558 LFNMYAKCGSLGEARGVFDSMVF-RDVVSWNNMIAA 592
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 191/430 (44%), Gaps = 85/430 (19%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + G+ PD+ +++ AC+ L + G+ + + ++ + +N I MY K
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ A F+ + R+D+ SW MI +S K + +F EM ++ G A
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREM----------LLEGTA-- 108
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
P+ +T S+L C +P L QG QIH+ +++ S+V V
Sbjct: 109 -------------------PNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVA 149
Query: 349 NAIL----------------------------------QHQAGEL---FRLFSLMLASQT 371
N++L Q G+ +LF ML T
Sbjct: 150 NSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGT 209
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA--LDVFVMNGLMDMYVKCGSLGSA 429
P+ +TF ++ C A + LE G Q+H ++++ L LD+ V+N ++MYVKCG L A
Sbjct: 210 APNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGA 269
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+ F M+ DVVSW+ +I Y+Q G +L+LFR M G PN VT V +L+ C
Sbjct: 270 VQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAP 329
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVV--DLLARAGRVHEAED---FINQMAFDDDI 544
L+E+G Q++ + ++ + VV LL R ED ++M+ D
Sbjct: 330 SLLEQGRQIHAL------VVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDS- 382
Query: 545 VVWKSLLASC 554
V W +++ +C
Sbjct: 383 VSWSTIIMAC 392
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 15/310 (4%)
Query: 13 RWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQN 72
R ++ + C L +A V DS + F D+ ++ + Q E ++ +
Sbjct: 553 RVATALFNMYAKCGSLGEARGVFDSMV--FRDVVSWNNMIAAYVQGRDGEGAISLCWAMQ 610
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
R +T+ L++ACS L GR++H I S+ + D V+ ++ MY CGSL
Sbjct: 611 LEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLN 670
Query: 133 DARMVFDEM------PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
+AR +FD + R++ WT+MI Q+G+ A+ELY QM + D+ TF S
Sbjct: 671 NAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFIS 730
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++ AC+ L + G+ +HA V++ + + N+++ MY K +A VF KD
Sbjct: 731 VLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKD 790
Query: 247 ITSWGSMIDGFSKL---DFARTVFNEMESPNLASWN-TIIAGVASCSNA---NEAMSLFS 299
I+ W ++I +++ + A +F + + N T +A +++CS+ E F+
Sbjct: 791 ISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFA 850
Query: 300 EMGDRELIPD 309
M + + P+
Sbjct: 851 SMAELGIEPN 860
>gi|147767158|emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 199/648 (30%), Positives = 321/648 (49%), Gaps = 103/648 (15%)
Query: 69 FLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYG 126
F+Q +++ ++P T + ++AC++LR G ++H + + + + + N +L+ Y
Sbjct: 46 FVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYA 105
Query: 127 KCGSLEDARMVFDEMPQRNVVSWT-------------------------------AMIAG 155
K L + VF+E+ +V SWT A+I G
Sbjct: 106 KSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITG 165
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
C++N A+ L+ +M Q G+ D++TF S++ CS L + GR++H VIK+
Sbjct: 166 CAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVR 224
Query: 216 LISQNALIAMYTKFDRILDAWNVFS---SIARKDITSWGSMIDGFSKL---DFARTVFNE 269
NAL+ MY ++ DA+ VF S DIT + MI G + + + A +F E
Sbjct: 225 ASVINALLTMYFNSGKVADAYEVFEEAESTVHDDIT-FNVMIGGLASVGRDEEALIMFKE 283
Query: 270 MESPNLASWN-TIIAGVASCSNA----------------------NEAMSLFSEMGDREL 306
M+ L T ++ ++SCS+A N AM+++S G+
Sbjct: 284 MQEACLRPTELTFVSVMSSCSSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHA 343
Query: 307 I---------------------------PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+ PD T+ SLL A + L + + Q + + K
Sbjct: 344 VHMVFDRLGNFYRLAILAFLQMQRAGIEPDEFTIGSLL-ASSESLEIVKMFQ--ALVSKN 400
Query: 340 GFYSNVPVCNAILQ--------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
G S + V NA++ QA + F +L S KP+ T + V+ CA++++L
Sbjct: 401 GLNSKIEVSNALVSAFSKHGQIEQAYQGLEQFYELLMSTLKPNAYTLSIVLSICASISAL 460
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G Q+H YI+++G+ + N L+ MY KCG L + +FN M D+VSW+++I Y
Sbjct: 461 RHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAY 520
Query: 452 AQFGCGEEALKLFRRMR-SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
AQ G G+EA+ F+ M+ S GV+P+ T VL+ACSH GLV++G +++ M N+YG P
Sbjct: 521 AQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEP 580
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+ SC+VDLL RAG + EAE IN +W +L ++C HGN+ +G+ A +
Sbjct: 581 GADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFL 640
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
L+I+ + A VLL NIYA++G+WEE A M++ V K PG SWI
Sbjct: 641 LEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWI 688
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 212/510 (41%), Gaps = 104/510 (20%)
Query: 152 MIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
++A +++ +A+++L+VQ+ S L PD FT S + AC+ L G QLHA+ I++
Sbjct: 29 LLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQT 88
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVF 267
++ N L++ Y K ++ VF+ I D+ SW +++ +KL +A +F
Sbjct: 89 GLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLF 148
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
N+ WN II G A + A++LF EM + D T S+L C+ L L
Sbjct: 149 NQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSLEL-LD 207
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------------------ 361
G ++H+ +IK GF V NA+L A E+F
Sbjct: 208 FGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGG 267
Query: 362 ------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
+F M + +P +TF VM +C +S + Q+H +K G
Sbjct: 268 LASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSC---SSARVSHQVHAQAIKMGFEAC 324
Query: 410 VFVMNGLMDMYVKCGSLGSARELFN------------FME------DPDVVSWSSLIV-- 449
V N M MY CG+L + +F+ F++ +PD + SL+
Sbjct: 325 TPVSNAAMTMYSSCGNLHAVHMVFDRLGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASS 384
Query: 450 ------------------------------GYAQFGCGEEA---LKLFRRMRSSGVRPNH 476
+++ G E+A L+ F + S ++PN
Sbjct: 385 ESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQGLEQFYELLMSTLKPNA 444
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
TL VL+ C+ + + G Q++ + G+ + ++ + A+ G + + N
Sbjct: 445 YTLSIVLSICASISALRHGKQIHGYILRS-GVFSVTSLGNALITMYAKCGDLDWSLRIFN 503
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
M DIV W +++++ HG GK A
Sbjct: 504 VMN-GRDIVSWNAMISAYAQHGK---GKEA 529
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 288/563 (51%), Gaps = 74/563 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y +L+ C L + G+K+H+H++ + + + NH++ MY KCGSLEDA+ VFD M
Sbjct: 72 AYGNLLRDCGELAA---GKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGM 128
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL-- 199
+R+ +SW+ MIAG ++G AI+LY M + PD FTF +++ ACS L L
Sbjct: 129 RRRDSISWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEV 185
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+++HAH+ + + +AL+ M+ K + ++ VF KD+
Sbjct: 186 GKEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDV------------ 233
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE--LIPDGLTVRSLL 317
+F WN++I + + EA+ LF MG + P+ +T ++L
Sbjct: 234 ------LF----------WNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVL 277
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR-------- 361
AC++ L QG ++H ++ GF + N+++ +A E+F
Sbjct: 278 AACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVV 337
Query: 362 --------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
L+ M + +P+ ITF V+ AC+++ +LE G +H +
Sbjct: 338 SWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQM 397
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
G D+ V N L+ +Y KCGS+ SAR++F+ M+ +VVSW+++I YA EEA+
Sbjct: 398 KAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAI 457
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+L++ M GV+ + VLTACS GL+E + + + G E C+ +
Sbjct: 458 QLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHYFGCLTRDCGAPAKLEDYVCMATV 517
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAGR+ EAE+ + M F+ + V W LLA+CK H +V+ G R AE + +++P N A
Sbjct: 518 LGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVLFRLEPLNEAPY 577
Query: 582 VLLCNIYASSGKWEEVARLMGSM 604
VLL NIY ++G+ EE AR+ M
Sbjct: 578 VLLSNIYVAAGRQEEAARVRRKM 600
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 195/425 (45%), Gaps = 42/425 (9%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDI--WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
F C L ++ EV D R+ D+ W+ + + + EA+ F + +++ +
Sbjct: 212 FAKCGSLKESREVFDDC--RWKDVLFWN-SMIVAYSQSGHPREAIELFKSM-GSSSPPVE 267
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P+ TY +++ACS++ L+ G++VH ++ + Q DA N ++NMY KCGS+ +AR V
Sbjct: 268 PNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREV 327
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD M QR VVSWT +I+ + G A++LY +M G+ P+ TF S++ ACS L +
Sbjct: 328 FDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGAL 387
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+ +HA + + + L NAL+++Y K + A VF + +++ SW +MI +
Sbjct: 388 EEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISAY 447
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
A ++ EA+ L+ M + ++L
Sbjct: 448 ----------------------------AHHRHSEEAIQLYKAMDLEGVQASSFIYGTVL 479
Query: 318 CACTSPLSLYQGMQIHSYIIKK-GFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPD 374
AC+ L + + G + + VC A + +AG L L+ + +
Sbjct: 480 TACSQAGLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAE 539
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMK-TGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+ + ++ AC A +E G ++ + + L +V+ L ++YV G A +
Sbjct: 540 FVAWMGLLAACKAHNDVERGARVAEVLFRLEPLNEAPYVL--LSNIYVAAGRQEEAARVR 597
Query: 434 NFMED 438
M D
Sbjct: 598 RKMGD 602
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 319/607 (52%), Gaps = 21/607 (3%)
Query: 40 RRFDDIWDFDLFSSLCKQNLYNEALV---AFDFLQNNTNFRIRP--STYADLISACSSLR 94
R FD + + D S ++Y+ V F L + + ++P +T L+S C+S
Sbjct: 201 RLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSD 260
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+ LG +H +SS L N ++NMY G L++A +F M +R+V+SW MI+
Sbjct: 261 LVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMIS 320
Query: 155 GCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
Q+ A+E Q+LQ+ P+ TF S + ACS + GR +HA +++
Sbjct: 321 SYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQ 380
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FARTVFNEM 270
+ L+ N+L+ MY+K + + D VF S+ D+ S + G++ L+ A VF+ M
Sbjct: 381 NVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWM 440
Query: 271 ESPNL-ASWNTIIAGVASCSNANE----AMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+ ++ T+I +C + + M L + + L+ D SL+ +
Sbjct: 441 RGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGD 500
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGA 384
L I S I K S + A ++H GE +LF + K D + + +
Sbjct: 501 LESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSS 560
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP---DV 441
A +ASLE G QLH +K GL D V+N MDMY KCG + + + DP
Sbjct: 561 SANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDC---MLKTLPDPAHRPT 617
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
W++LI GYA++G +EA F+ M S G +P++VT V +L+ACSH GL+++G+ Y
Sbjct: 618 QCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNS 677
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M +G+ P + C+VDLL R G+ EAE FI++M + ++W+SLL+S +TH N+D
Sbjct: 678 MAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLD 737
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+G++AA+N+L++DP + +A VLL N+YA++ +W +V +L MK + K P SW++++
Sbjct: 738 IGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLK 797
Query: 622 TKIHASG 628
++ G
Sbjct: 798 NEVSTFG 804
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 232/517 (44%), Gaps = 73/517 (14%)
Query: 84 ADLISACSSLRSLQ----LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
A L++AC R Q G +H + + + +L++YG G + +A+ +F
Sbjct: 45 ASLVTACEH-RGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFW 103
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EMPQRNVVSWTA++ S NG A+ Y +M + G+M + +++ C L
Sbjct: 104 EMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVA 163
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+ AHV+ S +H+ N+LI M+ R+ DA +F + +D SW +MI +S
Sbjct: 164 GLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSH 223
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ F + S+M E+ PD T+ SL+
Sbjct: 224 EEVYSKCF----------------------------IVLSDMRHGEVKPDVTTLCSLVSV 255
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---------- 361
C S + G IHS + G + +VP+ NA++ +A LFR
Sbjct: 256 CASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISW 315
Query: 362 -------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
L L+ + P+ +TF+ +GAC++ +L G +H I+
Sbjct: 316 NTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMIL 375
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ L + + N L+ MY KC S+ +F M DVVS + L GYA A++
Sbjct: 376 QRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMR 435
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVG-LVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+F MR +G++PN++T++ + C +G L G+ L+ + + G++ + ++ +
Sbjct: 436 VFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV-TQTGLLSDEYITNSLITM 494
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A G + + +++ + ++ W +++A+ HG
Sbjct: 495 YATCGDLESSTGIFSRIN-NKSVISWNAIIAANVRHG 530
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 51/322 (15%)
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ---- 331
+SW T ++G A C + A +L M +R++ G + SL+ AC ++G Q
Sbjct: 7 SSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACE-----HRGWQEGAA 61
Query: 332 ----IHSYIIKKGFYSNVPVCNAILQHQAGELF-----RLF------------------- 363
IH+ + G NV + A+L RLF
Sbjct: 62 CGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALS 121
Query: 364 -------SLMLASQTKPDHITFN-----DVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
+L+ + + + + N V+ C A+ G Q+ +++ +GL V
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS 181
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+ M+ + A LF+ ME+ D +SW+++I Y+ + + MR
Sbjct: 182 VANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGE 241
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
V+P+ TL +++ C+ LV G ++ + + G+ + + +V++ + AG++ EA
Sbjct: 242 VKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSS-GLHCSVPLINALVNMYSTAGKLDEA 300
Query: 532 EDFINQMAFDDDIVVWKSLLAS 553
E M+ D++ W ++++S
Sbjct: 301 ESLFRNMS-RRDVISWNTMISS 321
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 283/563 (50%), Gaps = 50/563 (8%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-SLE- 132
+F ++ + C S++ L +++H I+ + PDA L + C SL
Sbjct: 32 DFNPHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTIST-RLSALCAQSLPI 87
Query: 133 DARMVFDEMPQ---RNVVSWTAMIAG-CSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
D R + Q N+ + A+I G + N + +Y QML G++PD +T ++
Sbjct: 88 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVL 147
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+AC+ V G ++H IK S + N L+ MY D I A VF + ++D+
Sbjct: 148 KACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLV 207
Query: 249 SWGSMIDGFSKLDFAR------TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
SW +MI G+ K+ FAR + N + ++ N ++ C +AN A +F EM
Sbjct: 208 SWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMP 267
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL 362
+ ++ S S+ G+ +KG Q E +
Sbjct: 268 VKNVV--------------SWNSMISGLA------QKG--------------QFKESLYM 293
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M KPD +T V+ +CA + LE+G +H Y+ + + D F+ N L+DMY K
Sbjct: 294 FRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAK 353
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ A +F M DV S++++IVG A G G +AL LF M G+ P+ VT VGV
Sbjct: 354 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGV 413
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
LTACSHVGLVEEG + + M Y + P E C+VDLL RAG ++EAE+FI M +
Sbjct: 414 LTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEP 473
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D V +LL +CK HG V++G+ + I KI+P A VL+ NIY+S+ +W + +L
Sbjct: 474 DAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRK 533
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
+MKER + K PG S IE+ IH
Sbjct: 534 TMKERNLEKTPGCSSIELDGVIH 556
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVH 103
W+ + S L ++ + E+L F +Q ++P T ++++C++L L+LG+ VH
Sbjct: 274 WN-SMISGLAQKGQFKESLYMFRKMQR---LGVKPDDVTLVAVLNSCANLGVLELGKWVH 329
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
++ ++ + D + N +++MY KCGS++ A VF M +++V S+TAMI G + +GQ
Sbjct: 330 AYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGG 389
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
A++L+ +M + G+ PD+ TF ++ ACS + V GR+
Sbjct: 390 KALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRK 428
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 310/638 (48%), Gaps = 67/638 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D A + D R D ++ ++ QN + E L + + +T + L+
Sbjct: 194 VDYANYIFDQMSER--DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 251
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S + + GR +H ++ + N +L MY G +A +VF +MP ++++
Sbjct: 252 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 311
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +++A +G+ A+ L M+ SG + TF S + AC GR LH V
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ S + I NAL++MY K + ++ V + R+D+ +
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA------------------ 413
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
WN +I G A + ++A++ F M + + +TV S+L AC P L
Sbjct: 414 ----------WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463
Query: 328 Q-GMQIHSYIIKKGFYSNVPVCNAIL---------------------------------- 352
+ G +H+YI+ GF S+ V N+++
Sbjct: 464 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 523
Query: 353 -QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
H GE + +L S M + D +F++ + A A +A LE G QLH +K G D
Sbjct: 524 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 583
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
F+ N DMY KCG +G ++ + + SW+ LI + G EE F M
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 643
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G++P HVT V +LTACSH GLV++GL Y ++ ++G+ P E CV+DLL R+GR+ E
Sbjct: 644 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 703
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
AE FI++M + +VW+SLLASCK HGN+D G++AAEN+ K++P + + VL N++A+
Sbjct: 704 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 763
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
+G+WE+V + M + ++K SW++++ K+ + G
Sbjct: 764 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFG 801
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 262/564 (46%), Gaps = 80/564 (14%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSL-QLGRKVHDHI 106
+ S + + LY E + +F + + I+PS++ A L++AC S+ + G +VH +
Sbjct: 12 MMSGIVRVGLYLEGM---EFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
S D + IL++YG G + +R VF+EMP RNVVSWT+++ G S G+ I
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
++Y M G+ ++ + +I +C L LGRQ+ V+KS S L +N+LI+M
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
GSM +D+A +F++M + SWN+I A A
Sbjct: 189 ------------------------GSM----GNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+ E+ +FS M + TV +LL G IH ++K GF S V
Sbjct: 221 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 280
Query: 347 VCNAILQHQAG------------------------------------ELFRLFSLMLASQ 370
VCN +L+ AG + L M++S
Sbjct: 281 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 340
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+++TF + AC E G LH ++ +GL + + N L+ MY K G + +R
Sbjct: 341 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 400
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
+ M DVV+W++LI GYA+ ++AL F+ MR GV N++T+V VL+AC G
Sbjct: 401 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 460
Query: 491 -LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
L+E G L+ + + G ++ ++ + A+ G + ++D N + + +I+ W +
Sbjct: 461 DLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNA 518
Query: 550 LLASCKTHGNVDVGKRAAENILKI 573
+LA+ HG+ E +LK+
Sbjct: 519 MLAANAHHGH-------GEEVLKL 535
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 47/330 (14%)
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY-Q 328
M N SWNT+++G+ E M F +M D + P + SL+ AC S++ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 329 GMQIHSYIIKKGFYSNVPVCNAIL------------------------------------ 352
G+Q+H ++ K G S+V V AIL
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+ + E+ ++ M + + + V+ +C + +G Q+ ++K+GL + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ M G++ A +F+ M + D +SW+S+ YAQ G EE+ ++F MR
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR----AGRV 528
N T+ +L+ HV + G ++ ++ + + CV + L R AGR
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLV-----VKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
EA QM D++ W SL+AS G
Sbjct: 296 VEANLVFKQMP-TKDLISWNSLMASFVNDG 324
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 283/551 (51%), Gaps = 49/551 (8%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMP 179
+L + + DAR VFDE P R WT I+GC++ G+ + + +ML G P
Sbjct: 51 VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL--ISQNALIAMYTKFDRILDAWN 237
+ F +++R C+G+ V G+++H ++++ G HL + NA++ MY K + A
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRN--GVHLDVVLCNAVLDMYAKCGQFERARR 168
Query: 238 VFSSIARKDITSW----GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
VF ++A +D SW G+ I L + +F+E + SWNTII+G+ +A +
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILG-SMQLFDESPLRDTTSWNTIISGLMRSGHAAD 227
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV------ 347
A+S M ++ + T + L G Q+H ++ + V
Sbjct: 228 ALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMD 287
Query: 348 --CNAILQHQAGELFR-------------------------------LFSLMLASQTKPD 374
C L A +F LF ML D
Sbjct: 288 MYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAAD 347
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
T V ACA + +E G Q+H + K LD + + ++DMY KCG+L AR +F+
Sbjct: 348 RFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFD 407
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
++ W+S++ YA G G A++LF RM + + PN +TLVGVL+ACSHVGLV E
Sbjct: 408 RACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSE 467
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G ++ MQ EYGI+P+ E +C+VDL R+G + +A++FI + + + +VWK+LL++C
Sbjct: 468 GELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSAC 527
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H + + K A+E +++++ ++ + V+L NIYA++ KW + L SM+ER VRK PG
Sbjct: 528 RLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPG 587
Query: 615 QSWIEIQTKIH 625
+SWI ++ +H
Sbjct: 588 RSWIHLKNTVH 598
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 195/488 (39%), Gaps = 103/488 (21%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
V D R +W + S ++ Y + + AF + A ++ C+ +
Sbjct: 67 VFDERPTRTAPVWTLTI-SGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGM 125
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++ G++VH +L + D VL N +L+MY KCG E AR VF M +R+ VSW I
Sbjct: 126 GDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAI 185
Query: 154 AGCSQNGQENAAIELY-------------------------------VQMLQSGLMPDQF 182
C Q+G +++L+ +M Q+G++ + +
Sbjct: 186 GACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHY 245
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T+ + L LGRQLH V+ + +++L+ MY K + A +VF
Sbjct: 246 TYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFD-- 303
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
W + ++FA W+T++AG EA+ LF M
Sbjct: 304 ------HWSPLT---RDMNFA--------------WSTMVAGYVQNGREEEALDLFRRML 340
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------- 352
+ D T+ S+ AC + + QG Q+H + K + + P+ +AI+
Sbjct: 341 REGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLE 400
Query: 353 -------------------------QHQAGEL-FRLFSLMLASQTKPDHITFNDVMGACA 386
H G + LF M A + P+ IT V+ AC+
Sbjct: 401 DARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACS 460
Query: 387 AMASLEMGTQLHCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV--- 441
+ + G +L+ M+ G+ + N ++D+Y + G L A+ NF+E+ ++
Sbjct: 461 HVGLVSEG-ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAK---NFIEENNINHE 516
Query: 442 -VSWSSLI 448
+ W +L+
Sbjct: 517 AIVWKTLL 524
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 272/512 (53%), Gaps = 18/512 (3%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +++ Y K +E+AR VF+ MP+RNVVSWTAM+ G Q G A L+ +M + +
Sbjct: 83 NGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEV 142
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
FG +I + R+L+ + G +++ +I + R+ +A +
Sbjct: 143 SWTVMFGGLIDGGR----IDDARKLYDMM----PGKDVVASTNMIGGLCREGRVDEAREI 194
Query: 239 FSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + +++ +W +MI G+ ++D AR +F M SW +++ G +A
Sbjct: 195 FDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAE 254
Query: 296 SLFSEMGDRELIPDGLTVRSL--LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
F M + +I + +L + ++ M+ +G L
Sbjct: 255 EFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFEL- 313
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
E LF+ M +P + ++ CA +ASL+ G Q+H ++++ DV+V
Sbjct: 314 ----EALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVA 369
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ LM MYVKCG L A+ +F+ D++ W+S+I GYA G GEEALK+F M SG
Sbjct: 370 SVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTM 429
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
PN VTL+ +LTACS+ G +EEGL+++ M++++ + PT E SC VD+L RAG+V +A +
Sbjct: 430 PNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAME 489
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
IN M D VW +LL +CKTH +D+ + AA+ + +I+P N+ +LL +I AS K
Sbjct: 490 LINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSK 549
Query: 594 WEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
W +VA + +M+ + V K PG SWIE+ K+H
Sbjct: 550 WGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVH 581
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 24/273 (8%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFR 77
+ + L + GE+V + R FD + D D + + ++ EAL F +Q
Sbjct: 271 MIVALGEVGEIVKA-RRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQG--- 326
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RPS + ++S C++L SLQ GR+VH H++ + D + + ++ MY KCG L A+
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAK 386
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS--G 193
+VFD P ++++ W ++I+G + +G A++++ +M SG MP++ T +I+ ACS G
Sbjct: 387 LVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGG 446
Query: 194 LCCVGLG--RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
GL + + + H ++ K D+ ++ N S + D T WG
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELIN--SMTIKPDATVWG 504
Query: 252 SMIDG---FSKLDFARTVFN---EMESPNLASW 278
+++ S+LD A E+E N +
Sbjct: 505 ALLGACKTHSRLDLAEVAAKKLFEIEPENAGPY 537
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 164/391 (41%), Gaps = 84/391 (21%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
RK++D + D V +++ + G +++AR +FDEM +RNV++WT MI G Q
Sbjct: 160 ARKLYDMMPGK----DVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQ 215
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
N + + A +L+ +MP+ K+E +S
Sbjct: 216 NKRVDVARKLF------EVMPE----------------------------KTE-----VS 236
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FARTVFNEMESPNL 275
+++ YT RI DA F + K + + +MI ++ AR VF++ME +
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDN 296
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
A+W +I EA+ LF++M + + P ++ S+L C + SL G Q+H++
Sbjct: 297 ATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 336 IIKKGFYSNVPVCNAIL-----------------------------------QHQAG-EL 359
+++ F +V V + ++ H G E
Sbjct: 357 LVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEA 416
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL-HCYIMKTGLALDVFVMNGLMD 418
++F M S T P+ +T ++ AC+ LE G ++ K + V + +D
Sbjct: 417 LKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 419 MYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
M + G + A EL N M PD W +L+
Sbjct: 477 MLGRAGKVDKAMELINSMTIKPDATVWGALL 507
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 19/191 (9%)
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
+ G + AR+ F+ + + SW+S++ GY G EA ++F M N V+ G
Sbjct: 29 RIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPER----NIVSWNG 84
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS--CVVDLLARAGRVHEAEDFINQMA 539
+++ ++EE ++ IM P R S +V + G V EAE +M
Sbjct: 85 LVSGYIKNRMIEEARNVFEIM-------PERNVVSWTAMVKGYVQEGMVVEAELLFWRMP 137
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV-LLCNIYASSGKWEEVA 598
++ V W + G +D ++ + + D S ++ LC G+ +E
Sbjct: 138 ERNE-VSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCR----EGRVDEAR 192
Query: 599 RLMGSMKERGV 609
+ M+ER V
Sbjct: 193 EIFDEMRERNV 203
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 310/638 (48%), Gaps = 67/638 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D A + D R D ++ ++ QN + E L + + +T + L+
Sbjct: 211 VDYANYIFDQMSER--DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S + + GR +H ++ + N +L MY G +A +VF +MP ++++
Sbjct: 269 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 328
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +++A +G+ A+ L M+ SG + TF S + AC GR LH V
Sbjct: 329 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ S + I NAL++MY K + ++ V + R+D+ +
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA------------------ 430
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
WN +I G A + ++A++ F M + + +TV S+L AC P L
Sbjct: 431 ----------WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480
Query: 328 Q-GMQIHSYIIKKGFYSNVPVCNAIL---------------------------------- 352
+ G +H+YI+ GF S+ V N+++
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 540
Query: 353 -QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
H GE + +L S M + D +F++ + A A +A LE G QLH +K G D
Sbjct: 541 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 600
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
F+ N DMY KCG +G ++ + + SW+ LI + G EE F M
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 660
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G++P HVT V +LTACSH GLV++GL Y ++ ++G+ P E CV+DLL R+GR+ E
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 720
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
AE FI++M + +VW+SLLASCK HGN+D G++AAEN+ K++P + + VL N++A+
Sbjct: 721 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 780
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
+G+WE+V + M + ++K SW++++ K+ + G
Sbjct: 781 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFG 818
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 262/564 (46%), Gaps = 80/564 (14%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSL-QLGRKVHDHI 106
+ S + + LY E + +F + + I+PS++ A L++AC S+ + G +VH +
Sbjct: 29 MMSGIVRVGLYLEGM---EFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
S D + IL++YG G + +R VF+EMP RNVVSWT+++ G S G+ I
Sbjct: 86 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 145
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
++Y M G+ ++ + +I +C L LGRQ+ V+KS S L +N+LI+M
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 205
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
GSM +D+A +F++M + SWN+I A A
Sbjct: 206 ------------------------GSM----GNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+ E+ +FS M + TV +LL G IH ++K GF S V
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 347 VCNAILQHQAG------------------------------------ELFRLFSLMLASQ 370
VCN +L+ AG + L M++S
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+++TF + AC E G LH ++ +GL + + N L+ MY K G + +R
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
+ M DVV+W++LI GYA+ ++AL F+ MR GV N++T+V VL+AC G
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477
Query: 491 -LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
L+E G L+ + + G ++ ++ + A+ G + ++D N + + +I+ W +
Sbjct: 478 DLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNA 535
Query: 550 LLASCKTHGNVDVGKRAAENILKI 573
+LA+ HG+ E +LK+
Sbjct: 536 MLAANAHHGH-------GEEVLKL 552
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 285/530 (53%), Gaps = 54/530 (10%)
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+ SW + +++ AI Y++M SG PD F F ++++A SGL + G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 202 QLHAHVIKSEHGSHLIS-QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+HA +K +GS ++ N L+ MY K I D F++ A +M ++
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD--KTFTNNALM------AMYAKLGRV 164
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
D ++ +F ++ SWNT+I+ + +EA++ F M + DG+T+ S+L AC
Sbjct: 165 DDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPAC 224
Query: 321 TSPLSLYQGMQIHSYI------IKKGFYSNVPV---CNA--------ILQHQAGELFRLF 363
+ L G +IH+Y+ I+ F + V CN + H G L+
Sbjct: 225 SHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELW 284
Query: 364 SLMLASQTK---------------------PDHITFNDVMGACA-AMASLEMGTQLHCYI 401
+ M++ + P+ T VM AC ++A++ G ++H Y
Sbjct: 285 NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYA 344
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ LA D+ V + L+DMY KCG L +R +FN M + +V++W+ LI+ G GEEAL
Sbjct: 345 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 404
Query: 462 KLFRRM-----RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
+LF+ M R +PN VT + V ACSH GL+ EGL L+ M++++G+ PT + +
Sbjct: 405 ELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYA 464
Query: 517 CVVDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
CVVDLL RAG++ EA + +N M + D + W SLL +C+ H NV++G+ AA+N+L ++P
Sbjct: 465 CVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEP 524
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ VLL NIY+S+G W + + +M++ GV+K PG SWIE + ++H
Sbjct: 525 NVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVH 574
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 142/298 (47%), Gaps = 18/298 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ V D L R ++W+ + S + L +AL+ F +
Sbjct: 258 DMYCNCRQVESGRRVFDHILGRRIELWN-AMISGYARNGLDEKALILFIEMIKVAGLLPN 316
Query: 80 PSTYADLISAC-SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+T A ++ AC SL ++ G+++H + + + D + + +++MY KCG L +R VF
Sbjct: 317 TTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 376
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-----LMPDQFTFGSIIRACSG 193
+EMP +NV++W +I C +G+ A+EL+ M+ P++ TF ++ ACS
Sbjct: 377 NEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 436
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFSSIARK--DITS 249
+ G L + +K +HG S + ++ + + ++ +A+ + +++ + + +
Sbjct: 437 SGLISEGLNLF-YRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGA 495
Query: 250 WGSMIDG---FSKLDFARTVFNEM--ESPNLASWNTIIAGVASCSNA-NEAMSLFSEM 301
W S++ ++ + PN+AS +++ + S + N+AM + M
Sbjct: 496 WSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNM 553
>gi|297738569|emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 288/564 (51%), Gaps = 47/564 (8%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH-ILN 123
V FDF TN+ R Y L++ CSSL L ++H ++++ C + +L I+
Sbjct: 19 VLFDF---RTNYHSRSFNY--LLNCCSSLPDLS---RIHALVVTNGCGQNLLLSTKLIIT 70
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
+++ AR +FD+MP+R+V W +I G + G A+ LY M +GL PD +T
Sbjct: 71 ACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYT 130
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F ++R+C+ L + G+++H +++K S + Q++L+AMY++ L
Sbjct: 131 FPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGM-------- 182
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
VF EM N+ SW +IAG E + +F EM
Sbjct: 183 --------------------ELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVG 222
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELFR 361
P+ +T+ S+L AC L G IH Y IK G +V + NA+ L + G +
Sbjct: 223 SGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVET 282
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
SL + +++N ++ A + +L + + D M ++ Y+
Sbjct: 283 ARSL-FDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISAYL 341
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
ARE+F + VVSW+S+I A G GE+ALKLF RM+ GV+PN T
Sbjct: 342 -------AREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAA 394
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
V TAC H GLVEEG + + M +Y I+P E +C+VDLL RAG + EA +FI++M +
Sbjct: 395 VFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVE 454
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D+ VW +LL SC+ H N+++ + AE + +DP VL+ NIYA +G+WE+ ARL
Sbjct: 455 PDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLR 514
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
M+ER ++K+PG S +E+ + H
Sbjct: 515 KLMEERELKKIPGHSLVEVNRRFH 538
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 187/409 (45%), Gaps = 44/409 (10%)
Query: 24 LCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS-- 81
L +D A ++ D +R +W+ L EAL + + F P
Sbjct: 74 LAPTMDYARKMFDQMPKRDVFLWN-TLIRGYADAGPCEEALALYSNMHGAGLF---PDNY 129
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ +C+ L +L+ G++VH +I+ D + + ++ MY + G +VF EM
Sbjct: 130 TFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEM 189
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
RN+VSWTA+IAG QN + ++ +M+ SG P+ T S++ AC+GL + LG+
Sbjct: 190 VVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGK 249
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---- 257
+H + IK + NALIA+Y K + A ++F + +++ SW +MI +
Sbjct: 250 LIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNN 309
Query: 258 --------------SKLDF-------------ARTVFNEMESPNLASWNTIIAGVASCSN 290
K+DF AR VF + ++ SW ++I AS +
Sbjct: 310 AGANAVKLFRRMQAEKVDFDYITMVSVISAYLAREVFERLPCRSVVSWTSMIGACASHGH 369
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP---- 346
+A+ LFS M D + P+ T ++ AC + +G + +++ YS +P
Sbjct: 370 GEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRD--YSIMPGVEH 427
Query: 347 -VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
C L +AG L + + +PD + ++G+C ++LE+
Sbjct: 428 CACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELA 476
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 197/646 (30%), Positives = 310/646 (47%), Gaps = 98/646 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS---LQLGRKVHDHI 106
L S+LC + AL A + + T ++ ACS L +LGR+ H
Sbjct: 139 LISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFA 198
Query: 107 LSSKCQPDA---VLHNHILNMYGKCGSLEDARMVFDEMPQR------NVVSWTAMIAGCS 157
L + N +L+MY + G ++DA+ +F +VV+W MI+
Sbjct: 199 LKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLV 258
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK-SEHGSHL 216
Q G+ A+E+ M+ G+ PD TF S + ACS L + LGR++HA V+K ++ ++
Sbjct: 259 QGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANS 318
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN-- 274
+AL+ MY G K+ AR VF+ + P+
Sbjct: 319 FVASALVDMYA----------------------------GNEKVASARRVFDMVPEPSRQ 350
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
L WN +I G A EA+ LFS M + P T+ +L AC +H
Sbjct: 351 LGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMH 410
Query: 334 SYIIKKGFYSNVPVCNA------------------------------------ILQHQAG 357
Y++K+G N V NA ++Q A
Sbjct: 411 GYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAA 470
Query: 358 ELFRLFSLML----------------ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
E F+L + M A + P++IT ++ CAA+A+ G ++H Y
Sbjct: 471 EAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYA 530
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ L D+ V + L+DMY KCG L ++R +F+ + +V++W+ LI+ Y G G+EA+
Sbjct: 531 VRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAV 590
Query: 462 KLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
LF M + G PN VT + L ACSH GLV+ GL+L+ M+ ++G+ PT + +CVVD
Sbjct: 591 ALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVD 650
Query: 521 LLARAGRVHEAEDFINQM-AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+L RAGR+ EA I M + + W SLL +C+ H NV++G+ AAE + +++P ++
Sbjct: 651 VLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEAS 710
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VLLCNIY+++G W++ + M+ +GV K PG SWIE+ IH
Sbjct: 711 HYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIH 756
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 159/381 (41%), Gaps = 96/381 (25%)
Query: 270 MESPNLASWNTIIAGVASCSNANE-----------------------AMSLFSEMGD--- 303
+ P+ A N ++ A C + + A+ LF +
Sbjct: 95 LHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALD 154
Query: 304 --RELIPDG------LTVRSLLCACT---SPLSLYQGMQIHSYIIKKGFY----SNVPVC 348
R+++ +G T+ S+L AC+ G + H++ +K+GF P
Sbjct: 155 ALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPF- 213
Query: 349 NAILQ--------HQAGELFR------------------LFSL----------------M 366
NA+L A LFR + SL M
Sbjct: 214 NALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDM 273
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGS 425
++ +PD +TF + AC+ + L +G ++H ++K LA + FV + L+DMY
Sbjct: 274 VSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEK 333
Query: 426 LGSARELFNFMEDP--DVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGV 482
+ SAR +F+ + +P + W+++I GYAQ G EEAL+LF RM + +G P+ T+ GV
Sbjct: 334 VASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGV 393
Query: 483 LTACSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
L AC+ EG M + G+ R ++ ++D+ AR G + A I M
Sbjct: 394 LPACAR----SEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARR-IFAMI 448
Query: 540 FDDDIVVWKSLLASCKTHGNV 560
D+V W +L+ C G+
Sbjct: 449 DPRDVVSWNTLITGCVVQGHA 469
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 17/197 (8%)
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL--ALDVFVMNGLMDMYVKCG--SLG 427
+ DH + + AA+ LH ++ L V N L+ Y +CG
Sbjct: 60 QLDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAA 119
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP-NHVTLVGVLTAC 486
A E D VS++SLI F E AL R M + G + TLV VL AC
Sbjct: 120 LALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLAC 179
Query: 487 SHVGLVEEGLQLYRIMQN---EYGIIPTRERR---SCVVDLLARAGRVHEAEDFINQMAF 540
SH+ ++G +L R + G + R + ++ + AR G V +A+ A
Sbjct: 180 SHLP-GDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAA 238
Query: 541 -----DDDIVVWKSLLA 552
D+V W ++++
Sbjct: 239 AFSPGGGDVVTWNTMIS 255
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 288/558 (51%), Gaps = 40/558 (7%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYG-KCGSL 131
T F+ + S Y L SA S +S + +K+H ++ + D + + Y ++
Sbjct: 18 TTKFKSKNSNYKTL-SALQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNI 76
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ A VF + + SWT MI G + A+E Y M Q G+ ++FTF +++A
Sbjct: 77 DYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAY 136
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
GR +H ++K + ++NALI MY K I DA +F + ++ +W
Sbjct: 137 GLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWN 196
Query: 252 SMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+MI G + AR +F EM N+ SWN ++ G + + + A SLF M +R+++
Sbjct: 197 TMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVS 256
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLA 368
G S +S Y ++ G +A E LF M+
Sbjct: 257 WG-----------SMISAY---------VQNG--------------RAAEALELFKEMML 282
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ D I ++ ACA + +L+MG +H Y+ ++ L DVF+ L+DMY KCG + +
Sbjct: 283 AGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDT 342
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A +FN M ++ SW++++ G A G G AL+LF++M S+GV PN +T V VL+ACSH
Sbjct: 343 AFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSH 402
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
+G VEEG + + M E+ I P E C+VD+L R G ++EA++ I M + ++V+W
Sbjct: 403 IGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWG 462
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL +CK HG +VG+ I K+ + VLL NI+A+ +W EV + MK+ G
Sbjct: 463 ALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMG 522
Query: 609 V-RKVPGQSWIEIQTKIH 625
V +K+PG S IE+ + +H
Sbjct: 523 VEKKIPGYSSIELDSVVH 540
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 165/415 (39%), Gaps = 109/415 (26%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
E + F L + T+ ++ A S Q GR VH ++ D N +
Sbjct: 108 EKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNAL 167
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG----- 176
++MY KCGS+ DA ++FDEMP NVV+W MI GC G A L+ +M +
Sbjct: 168 IHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWN 227
Query: 177 --------------------LMP--DQFTFGS---------------------------- 186
LMP D ++GS
Sbjct: 228 AVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSA 287
Query: 187 -------IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
I+ AC+ + + +GR +HA++ +S+ + + AL+ MY K I A+ VF
Sbjct: 288 DSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVF 347
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+++ RK++ SW N +++G+A + A+ LF
Sbjct: 348 NTMPRKNLCSW----------------------------NAMLSGLAIHGHGFAALELFK 379
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----------VC 348
+M + P+ +T ++L AC+ S+ +G + + + K+ ++ P +C
Sbjct: 380 QMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKE--FNITPKVEHYGCMVDILC 437
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
L ++A E+ R L +P+ + + ++ AC +G + YI K
Sbjct: 438 RQGLINEAKEMIRTMPL------EPNVVIWGALLNACKVHGYTNVGEDVVGYIQK 486
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 295/579 (50%), Gaps = 61/579 (10%)
Query: 82 TYADLISACS-SLRSLQLG--RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
++ L++A S SL S L R++ D + Q DAV N +L Y + G + +A +F
Sbjct: 94 SWNTLLAAYSRSLNSEHLAAARRLFDEM----PQRDAVTWNTLLGAYVRRGLMVEAEKLF 149
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
DEMPQRNV SW M+ G GQ N A++++ M + D + G+++ SG G
Sbjct: 150 DEMPQRNVASWNTMVTGFFSAGQVNKALDMFDAMP----VKDSASLGTLV---SGFIKNG 202
Query: 199 LGRQLHAHVIK----SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR---------- 244
+ + K ++ + + N LIA Y + R+ DA +F I R
Sbjct: 203 RLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNM 262
Query: 245 ----KDITSWGSMIDGFSKLD---FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+++ SW SM+ + + AR +FNEM +L SWNT+IAG S+ EA L
Sbjct: 263 RVFARNVVSWNSMMTCYIRTGDVCSAREIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKL 322
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----- 352
F EM D +++ L +R +G H+ +GF+ +P I
Sbjct: 323 FWEMPDPDIVSWNLIIRGFT---------QKGDVEHA----RGFFDRMPERGTISWNTMI 369
Query: 353 ------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
H G + LF+ ML + PD TF+ V+ ACA++ L +G QLH I K+ L
Sbjct: 370 SGYEQNGHYDGAI-ELFTKMLEAGGTPDRHTFSSVLAACASLPMLRLGAQLHQLIEKSFL 428
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D N LM MY + G+L A +F M D+VSW++LI GY GC EAL+LF
Sbjct: 429 P-DTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGYEHHGCATEALQLFED 487
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
MRS+ V P H+T + +L+AC + GLV EG ++ M +EY I E + +V+L+ R G
Sbjct: 488 MRSARVMPTHITFISLLSACGNAGLVSEGWMVFDTMIHEYSIAARIEHYAALVNLIGRHG 547
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
++ +A + IN M D VW + L +C N + AA+ + KIDP +SA VL+ N
Sbjct: 548 QLDDALEVINSMPIAPDRSVWGAFLGACTAKKNELLAHMAAKALSKIDPESSAPYVLIHN 607
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++A G+W + + M+++G+ K PG SWI++ K+H
Sbjct: 608 LHAHEGRWGSASVVREEMEQQGIHKHPGYSWIDLHDKVH 646
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 204/443 (46%), Gaps = 41/443 (9%)
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC- 196
FD +P R+VV+W + +A ++ AA + M + D ++ +++ A S
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASM----PVRDAVSWNTLLAAYSRSLNS 108
Query: 197 --VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ R+L + + + ++ N L+ Y + +++A +F + ++++ SW +M+
Sbjct: 109 EHLAAARRLFDEMPQRD----AVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMV 164
Query: 255 DGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
GF +++ A +F+ M + AS T+++G +EA L ++ + + +
Sbjct: 165 TGFFSAGQVNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAV 224
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKG-----------FYSNVPVCNAILQ--HQAGE 358
+ L A + + +I +G F NV N+++ + G+
Sbjct: 225 DAYNTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGD 284
Query: 359 L---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
+ +F+ M D +++N ++ ++ +E +L + D+ N
Sbjct: 285 VCSAREIFNEM----PDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDP----DIVSWNL 336
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
++ + + G + AR F+ M + +SW+++I GY Q G + A++LF +M +G P+
Sbjct: 337 IIRGFTQKGDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPD 396
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
T VL AC+ + ++ G QL+++++ + +P + ++ + +R G + +AE
Sbjct: 397 RHTFSSVLAACASLPMLRLGAQLHQLIEKSF--LPDTATSNALMTMYSRGGALTDAEAIF 454
Query: 536 NQMAFDDDIVVWKSLLASCKTHG 558
QM D+V W +L+ + HG
Sbjct: 455 KQMP-QKDLVSWNALIGGYEHHG 476
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 171/417 (41%), Gaps = 42/417 (10%)
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK------LDFARTVFNE 269
+++ N+ +A + + A F+S+ +D SW +++ +S+ L AR +F+E
Sbjct: 61 VVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLAAARRLFDE 120
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA--CTSPLSLY 327
M + +WNT++ EA LF EM R + V A L ++
Sbjct: 121 MPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNKALDMF 180
Query: 328 QGMQIHSY----IIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
M + + GF N + H+A EL L + + +N ++
Sbjct: 181 DAMPVKDSASLGTLVSGFIKNGRL------HEAEEL--LTKRLRVTDMDEAVDAYNTLIA 232
Query: 384 ACAAMASLEMGTQLH------CYIMKTG----LALDVFVMNGLMDMYVKCGSLGSARELF 433
A + + +L Y KT A +V N +M Y++ G + SARE+F
Sbjct: 233 AYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIF 292
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
N M D D+VSW+++I GY + EEA KLF M P+ V+ ++ + G VE
Sbjct: 293 NEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPD----PDIVSWNLIIRGFTQKGDVE 348
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSL 550
+ M E G I + ++ + G A + +M D + S+
Sbjct: 349 HARGFFDRMP-ERGTISW----NTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSV 403
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
LA+C + + +G + + I K ++A L +Y+ G + + M ++
Sbjct: 404 LAACASLPMLRLGAQLHQLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQK 460
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 295/578 (51%), Gaps = 73/578 (12%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-- 143
L++ RSL+ ++H I+ + L N+++N+Y KCG L A ++F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ +V+WT++I S A+ L+ QM SG P+QFTF SI+ A + V G+QL
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H+ + K +++ AL+ MY K + + A
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKC----------------------------ADMHSA 299
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE-MGDRELIPDGLTVRSLLCACTS 322
VF++M NL SWN++I G + + A+ +F + + ++ +IP+ ++V S+L AC +
Sbjct: 300 VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 359
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------------- 361
L G Q+H ++K G V N+++ + +LF+
Sbjct: 360 MGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 419
Query: 362 ---------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
F +M PD +F+ V+ + A++A+L GT +H I+K G
Sbjct: 420 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGY 479
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
++ ++ L+ MY KCGSL A ++F +ED +V+SW+++I Y GC + ++LF
Sbjct: 480 VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEH 539
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M S G+ P+HVT V VL+ACSH G VEEGL + M+ + + P E +C+VDLL RAG
Sbjct: 540 MLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAG 599
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EA+ FI M VW +LL +C+ +GN+ +G+ AAE + +++P N VLL N
Sbjct: 600 WLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLAN 659
Query: 587 IYASSGKWE---EVARLMGSMKERGVRKVPGQSWIEIQ 621
+ SG+ E EV RLMG GVRK PG SWI+++
Sbjct: 660 MCTRSGRLEEANEVRRLMGV---NGVRKEPGCSWIDVK 694
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
N ++ SL+ TQ+H I+ F+ N L+++Y KCG L A LF+
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204
Query: 438 D--PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+V+W+SLI + F +AL LF +MR SG PN T +L+A + +V G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
QL+ ++ ++G + +VD+ A+ +H A +QM + ++V W S++
Sbjct: 265 QQLHSLIH-KHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMI 318
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 285/548 (52%), Gaps = 67/548 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY ++ A LR ++ G KV I+ + D ++N +++MY + ++E+A+ +FDEM
Sbjct: 199 TYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEM 258
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLG 200
R+ VSW MI+G + + AI + +M Q G PD+ T S + AC+ L + LG
Sbjct: 259 TTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELG 318
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
++H +V + E G NAL+ MY K L
Sbjct: 319 DEIHNYV-RKELGFTTRIDNALLDMYAKC----------------------------GCL 349
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ AR +F+EM N+ W ++I+G +C + EA LF + R+++
Sbjct: 350 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV------------- 396
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
L+ M I+ Y+ H + LF M + KPD T
Sbjct: 397 -----LWTAM-INGYV---------------QFHHFDDAVALFREMQIQKIKPDKFTVVT 435
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ CA + +LE G +H Y+ + + +DV V L++MY KCG + + E+F +ED D
Sbjct: 436 LLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKD 495
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
SW+S+I G A G EAL+LF M G +P+ +T +GVL+ACSH GLVEEG + +
Sbjct: 496 TASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFN 555
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD-DIVV--WKSLLASCKTH 557
M+ + I P E CV+DLL RAG + EAE+ I ++ ++ +IVV + +LL++C+ H
Sbjct: 556 SMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIH 615
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
NVD+G+R A+ + I+ +S+ LL NIYAS +WE+ ++ MKE GV+K+PG S
Sbjct: 616 NNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSL 675
Query: 618 IEIQTKIH 625
IE+ +H
Sbjct: 676 IEVDGIVH 683
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 61/325 (18%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
++ A ++ D R W+ + S + + +A+ F +Q N + +T +
Sbjct: 248 VENAKKLFDEMTTRDSVSWNV-MISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTL 306
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM------ 141
SAC++L++L+LG ++H+++ + + N +L+MY KCG L AR +FDEM
Sbjct: 307 SACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVI 365
Query: 142 -------------------------PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
P R+VV WTAMI G Q + A+ L+ +M
Sbjct: 366 CWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQK 425
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+ PD+FT +++ C+ L + G+ +H ++ ++ ++ ALI MY+K + +
Sbjct: 426 IKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 485
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+F + KD SW S II G+A +EA+
Sbjct: 486 EIFYELEDKDTASWTS----------------------------IICGLAMNGKTSEALR 517
Query: 297 LFSEMGDRELIPDGLTVRSLLCACT 321
LFSEM PD +T +L AC+
Sbjct: 518 LFSEMERVGAKPDDITFIGVLSACS 542
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 60 YNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
+++A+ F +Q +I+P T L++ C+ L +L+ G+ +H ++ ++ D V+
Sbjct: 411 FDDAVALFREMQIQ---KIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVV 467
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
++ MY KCG ++ + +F E+ ++ SWT++I G + NG+ + A+ L+ +M + G
Sbjct: 468 GTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGA 527
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQL 203
PD TF ++ ACS V GR+
Sbjct: 528 KPDDITFIGVLSACSHGGLVEEGRRF 553
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 283/543 (52%), Gaps = 70/543 (12%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY K E AR+V P RNVVSWT++I+G +QNG + A+ + +M + G++P+ FT
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F +A + L G+Q+HA +K RILD VF +
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKC-------------------GRILD---VFVGCS 98
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
D+ + D AR +F+E+ NL +WN I+ + EA+ F E
Sbjct: 99 AFDMYCKTRLRDD------ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 152
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQA 356
+ P+ +T + L AC+ L L GMQ+H +++ GF ++V VCN ++ Q ++
Sbjct: 153 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 212
Query: 357 GELFRLFSLM--------------------------LASQTKPDHITFND-----VMGAC 385
E+ +F+ M L +++ D + +D V+ AC
Sbjct: 213 SEI--IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 270
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A MA LE+G +H + +K + +FV + L+DMY KCG + + + F+ M + ++V+ +
Sbjct: 271 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 330
Query: 446 SLIVGYAQFGCGEEALKLFRRM--RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
SLI GYA G + AL LF M R G PN++T V +L+ACS G VE G++++ M+
Sbjct: 331 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 390
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
+ YGI P E SC+VD+L RAG V A +FI +M I VW +L +C+ HG +G
Sbjct: 391 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 450
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
AAEN+ K+DP +S VLL N +A++G+W E + +K G++K G SWI ++ +
Sbjct: 451 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQ 510
Query: 624 IHA 626
+HA
Sbjct: 511 VHA 513
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 143/297 (48%), Gaps = 15/297 (5%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYN--EALVAFDFLQNN 73
C +D + L D A ++ D R + W+ + +S+ EA + F + +
Sbjct: 97 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 156
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
N T+ ++ACS L LG ++H +L S D + N +++ YGKC +
Sbjct: 157 PN----SITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 212
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
+ ++F EM +N VSW +++A QN ++ A LY++ + + F S++ AC+G
Sbjct: 213 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 272
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+ + LGR +HAH +K+ + +AL+ MY K I D+ F + K++ + S+
Sbjct: 273 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 332
Query: 254 IDGFS---KLDFARTVFNEM------ESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
I G++ ++D A +F EM +PN ++ ++++ + M +F M
Sbjct: 333 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 389
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 319/607 (52%), Gaps = 21/607 (3%)
Query: 40 RRFDDIWDFDLFSSLCKQNLYNEALV---AFDFLQNNTNFRIRP--STYADLISACSSLR 94
R FD + + D S ++Y+ V F L + + ++P +T L+S C+S
Sbjct: 201 RLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSD 260
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+ LG +H +SS L N ++NMY G L++A +F M +R+V+SW MI+
Sbjct: 261 LVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMIS 320
Query: 155 GCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
Q+ A+E Q+LQ+ P+ TF S + ACS + GR +HA +++
Sbjct: 321 SYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQ 380
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FARTVFNEM 270
+ L+ N+L+ MY+K + + D VF S+ D+ S + G++ L+ A VF+ M
Sbjct: 381 NVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWM 440
Query: 271 ESPNL-ASWNTIIAGVASCSNANE----AMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+ ++ T+I +C + + M L + + L+ D SL+ +
Sbjct: 441 RGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGD 500
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGA 384
L I S I K S + A ++H GE +LF + K D + + +
Sbjct: 501 LESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSS 560
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP---DV 441
A +ASLE G QLH +K GL D V+N MDMY KCG + + + DP
Sbjct: 561 SANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDC---MLKTLPDPAHRPT 617
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
W++LI GYA++G +EA F+ M S G +P++VT V +L+ACSH GL+++G+ Y
Sbjct: 618 QCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNS 677
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M +G+ P + C+VDLL R G+ EAE FI++M + ++W+SLL+S +TH N+D
Sbjct: 678 MAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLD 737
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+G++AA+N+L++DP + +A VLL N+YA++ +W +V +L MK + K P SW++++
Sbjct: 738 IGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLK 797
Query: 622 TKIHASG 628
++ G
Sbjct: 798 NEVSTFG 804
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 232/517 (44%), Gaps = 73/517 (14%)
Query: 84 ADLISACSSLRSLQ----LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
A L++AC R Q G +H + + + +L++YG G + +A+ +F
Sbjct: 45 ASLVTACEH-RGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFW 103
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EMPQRNVVSWTA++ S NG A+ Y +M + G+M + +++ C L
Sbjct: 104 EMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVA 163
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G Q+ AHV+ S +H+ N+LI M+ R+ DA +F + +D SW +MI +S
Sbjct: 164 GLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSH 223
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ F + S+M E+ PD T+ SL+
Sbjct: 224 EEVYSKCF----------------------------IVLSDMRHGEVKPDVTTLCSLVSV 255
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR---------- 361
C S + G IHS + G + +VP+ NA++ +A LFR
Sbjct: 256 CASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISW 315
Query: 362 -------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
L L+ + P+ +TF+ +GAC++ +L G +H I+
Sbjct: 316 NTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMIL 375
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ L + + N L+ MY KC S+ +F M DVVS + L GYA A++
Sbjct: 376 QRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMR 435
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVG-LVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+F MR +G++PN++T++ + C +G L G+ L+ + + G++ + ++ +
Sbjct: 436 VFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV-TQTGLLSDEYITNSLITM 494
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A G + + +++ + ++ W +++A+ HG
Sbjct: 495 YATCGDLESSTGIFSRIN-NKSVISWNAIIAANVRHG 530
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 51/322 (15%)
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ---- 331
+SW T ++G A C + A +L M +R++ G + SL+ AC ++G Q
Sbjct: 7 SSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACE-----HRGWQEGAA 61
Query: 332 ----IHSYIIKKGFYSNVPVCNAILQHQAGELF-----RLF------------------- 363
IH+ + G NV + A+L RLF
Sbjct: 62 CGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALS 121
Query: 364 -------SLMLASQTKPDHITFN-----DVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
+L+ + + + + N V+ C A+ G Q+ +++ +GL V
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS 181
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+ M+ + A LF+ ME+ D +SW+++I Y+ + + MR
Sbjct: 182 VANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGE 241
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
V+P+ TL +++ C+ LV G ++ + + G+ + + +V++ + AG++ EA
Sbjct: 242 VKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSS-GLHCSVPLINALVNMYSTAGKLDEA 300
Query: 532 EDFINQMAFDDDIVVWKSLLAS 553
E M+ D++ W ++++S
Sbjct: 301 ESLFRNMS-RRDVISWNTMISS 321
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 178/588 (30%), Positives = 297/588 (50%), Gaps = 65/588 (11%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
+ +T + L+S + + GR +H ++ + N +L MY G E+A +V
Sbjct: 360 VNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLV 419
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F +MP ++++SW +++A +G+ A+ + M+++G + TF S + AC
Sbjct: 420 FKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFF 479
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
GR LH V+ S + I NAL++MY K I G
Sbjct: 480 DKGRILHGLVVVSGLFDNQIIGNALVSMYGK-------------------------IGGM 514
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
S +R V +M ++ +WN +I G A + ++A++ F + + + +TV S+L
Sbjct: 515 ST---SRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVL 571
Query: 318 CACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVCNAIL------------------------ 352
AC P L + G +H+YI+ GF S+ V N+++
Sbjct: 572 SACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSI 631
Query: 353 -----------QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
H GE + +L S M + D +F++ + A A +A LE G QLH
Sbjct: 632 ITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 691
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K G LD F+ N DMY KCG +G ++ + + SW+ LI + G EE
Sbjct: 692 AVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 751
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
+ F M G++P HVT V +LTACSH GLV++GL Y ++ ++G+ P E CV+D
Sbjct: 752 CETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVID 811
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R+GR+ EAE FI++M + +VW+SLLASCK H ++D G++AAEN+ K++P + +
Sbjct: 812 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSV 871
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
VL N++A++G+WE+V + M + ++K SW++++ K+ + G
Sbjct: 872 FVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFG 919
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 262/564 (46%), Gaps = 80/564 (14%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSL-QLGRKVHDHI 106
+ S + + LY E + +F Q + I+PS++ A L++AC S+ + G +VH +
Sbjct: 130 MMSGIVRVGLYLEGM---EFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 186
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
S D + IL++YG G + +R VF+EMP RNVVSWT+++ G S G+ I
Sbjct: 187 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 246
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
++Y M G+ ++ + +I +C L LGRQ+ VIKS S L +N+LI+M+
Sbjct: 247 DIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMF 306
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
+ A +F+ I+ +D S WN+I+A A
Sbjct: 307 GNMGNVDYANYIFNQISERDTIS----------------------------WNSIVAAYA 338
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+ E+ +F+ M + TV +LL G IH ++K GF S V
Sbjct: 339 QNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVC 398
Query: 347 VCNAILQHQAG-----------------ELFRLFSL-------------------MLASQ 370
VCN +L+ AG +L SL M+ +
Sbjct: 399 VCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTG 458
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+++TF + AC + + G LH ++ +GL + + N L+ MY K G + ++R
Sbjct: 459 KSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSR 518
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
+ M DVV+W++LI GYA+ ++AL F+ +R GV N++T+V VL+AC G
Sbjct: 519 RVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPG 578
Query: 491 -LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
L+E G L+ + + G ++ ++ + A+ G + ++D N + + I+ W +
Sbjct: 579 DLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRSIITWNA 636
Query: 550 LLASCKTHGNVDVGKRAAENILKI 573
+LA+ HG+ E +LK+
Sbjct: 637 ILAANAHHGH-------GEEVLKL 653
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 176/420 (41%), Gaps = 82/420 (19%)
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
DQ F I R +G R LHA +K ++ N LI MYTKF R+ A +F
Sbjct: 64 DQTGFSQITRETTG-------RALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLF 116
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ V NE+ SWNT+++G+ E M F
Sbjct: 117 DKMP----------------------VRNEV------SWNTMMSGIVRVGLYLEGMEFFQ 148
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLY-QGMQIHSYIIKKGFYSNVPVCNAIL------ 352
+M D + P + SL+ AC S++ +G+Q+H ++ K G S+V V AIL
Sbjct: 149 KMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVY 208
Query: 353 ------------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVM 382
+ + E+ ++ M + + + + V+
Sbjct: 209 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVI 268
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
+C + +G Q+ ++K+GL + V N L+ M+ G++ A +FN + + D +
Sbjct: 269 SSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTI 328
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
SW+S++ YAQ G EE+ ++F MR N T+ +L+ V + G ++ ++
Sbjct: 329 SWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLV 388
Query: 503 QNEYGIIPTRERRSCVVDLLAR----AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + CV + L R AGR EA+ QM D++ W SL+AS G
Sbjct: 389 -----VKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP-TKDLISWNSLMASFVNDG 442
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 301/607 (49%), Gaps = 81/607 (13%)
Query: 65 VAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL 122
+A + Q +RP+ T ++ C+++R Q +H + S + V+ +
Sbjct: 211 IALELFQRMQLEGVRPARITLVIALTVCATIRQAQ---AIHFIVRESGLEQTLVVSTALA 267
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
+ Y + G L A+ VFD +R+VVSW AM+ +Q+G + A L+ +ML G+ P +
Sbjct: 268 SAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKV 327
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T ++ A +G + GR +H ++ ++ NAL+ MYT+ +A ++F I
Sbjct: 328 T---LVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI 384
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
N SWNT+IAG + A+ LF M
Sbjct: 385 -----------------------------PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQ 415
Query: 303 DRELIPDGLTVRSLLCACTS----PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------ 352
+ P T +LL A S ++ +G ++HS I+ G+ S + A++
Sbjct: 416 LEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASC 475
Query: 353 --------------------------------QHQAGE-LFRLFSLMLASQTKPDHITFN 379
QH G+ F M P+ IT
Sbjct: 476 GAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCV 535
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-D 438
V+ ACA A+L G +H ++ +G+ ++FV L MY +CGSL SARE+F + +
Sbjct: 536 AVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
DVV ++++I Y+Q G EALKLF RM+ G RP+ + V VL+ACSH GL +EG ++
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+R M+ YGI P+ + +C VD+L RAG + +AE+ I M ++VWK+LL +C+ +
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+VD G+ A + ++DP + +A V+L NI A +GKW+E A + M+ RG+RK G+SWI
Sbjct: 716 DVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWI 775
Query: 619 EIQTKIH 625
EI++++H
Sbjct: 776 EIKSRVH 782
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 260/548 (47%), Gaps = 34/548 (6%)
Query: 55 CKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
C Q L A L ++++ RP+ L+ A R L GR++H I+S + +
Sbjct: 4 CCQGLGAAAPAPAADLPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE 63
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
L NH+L +Y KC SL D VF + R+ SWT +I +++GQ AI ++ +M Q
Sbjct: 64 --LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQ 121
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
G+ D TF ++++AC+ L + GR +HA +++S + N L+ +Y +
Sbjct: 122 EGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVAS 181
Query: 235 AWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWN-TIIAGVASCSN 290
A +F + R D+ SW + I ++ L A +F M+ + T++ + C+
Sbjct: 182 AMLLFEKMER-DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCAT 240
Query: 291 ANEAMS---LFSEMGDRELIPDGLTVRSLLCACTSPLS-LYQGMQIHSYIIKKGFYSNVP 346
+A + + E G + L V + L + + L LYQ ++ ++ S
Sbjct: 241 IRQAQAIHFIVRESG----LEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNA 296
Query: 347 VCNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ A QH E LF+ ML P +T + C +SL G +H ++ G
Sbjct: 297 MLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC---SSLRFGRMIHGCALEKG 353
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLF 464
L D+ + N L+DMY +CGS AR LF + P + VSW+++I G +Q G + A++LF
Sbjct: 354 LDRDIVLGNALLDMYTRCGSPEEARHLFKRI--PCNAVSWNTMIAGSSQKGQMKRAVELF 411
Query: 465 RRMRSSGVRPNHVTLVGVLTACS----HVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVV 519
+RM+ G+ P T + +L A + + EG +L+ RI+ Y P + VV
Sbjct: 412 QRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVV 469
Query: 520 DLLARAGRVHEAEDFINQMAFDD--DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+ A G + EA + A +D D+V W ++++S HG+ GKRA ++D
Sbjct: 470 KMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH---GKRALGFFRRMDLHG 526
Query: 578 SAALVLLC 585
A + C
Sbjct: 527 VAPNQITC 534
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 310/638 (48%), Gaps = 67/638 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D A + D R D ++ ++ QN + E L + + +T + L+
Sbjct: 301 VDYANYIFDQMSER--DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 358
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S + + GR +H ++ + N +L MY G +A +VF +MP ++++
Sbjct: 359 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 418
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW +++A +G+ A+ L M+ SG + TF S + AC GR LH V
Sbjct: 419 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 478
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ S + I NAL++MY K + ++ V + R+D+ +
Sbjct: 479 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA------------------ 520
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
WN +I G A + ++A++ F M + + +TV S+L AC P L
Sbjct: 521 ----------WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 570
Query: 328 Q-GMQIHSYIIKKGFYSNVPVCNAIL---------------------------------- 352
+ G +H+YI+ GF S+ V N+++
Sbjct: 571 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 630
Query: 353 -QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
H GE + +L S M + D +F++ + A A +A LE G QLH +K G D
Sbjct: 631 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 690
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
F+ N DMY KCG +G ++ + + SW+ LI + G EE F M
Sbjct: 691 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 750
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G++P HVT V +LTACSH GLV++GL Y ++ ++G+ P E CV+DLL R+GR+ E
Sbjct: 751 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 810
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
AE FI++M + +VW+SLLASCK HGN+D G++AAEN+ K++P + + VL N++A+
Sbjct: 811 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 870
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
+G+WE+V + M + ++K SW++++ K+ + G
Sbjct: 871 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFG 908
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/562 (25%), Positives = 243/562 (43%), Gaps = 97/562 (17%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
GR VH + + + N ++NMY K G ++ AR +FD MP RN VSW M++G +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGLGRQLHAHVIKSEHGSHL 216
G +E + +M G+ P F S++ AC SG G Q+H V KS S +
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG-SMFREGVQVHGFVAKSGLLSDV 209
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS------------------ 258
A++ +Y + + + VF + +++ SW S++ G+S
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLG 269
Query: 259 ------------------------------KLDFARTVFNEMESPNLASWNTIIAGVASC 288
+D+A +F++M + SWN+I A A
Sbjct: 270 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 329
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
+ E+ +FS M + TV +LL G IH ++K GF S V VC
Sbjct: 330 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 389
Query: 349 NAILQHQAG------------------------------------ELFRLFSLMLASQTK 372
N +L+ AG + L M++S
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 449
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+++TF + AC E G LH ++ +GL + + N L+ MY K G + +R +
Sbjct: 450 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 509
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG-L 491
M DVV+W++LI GYA+ ++AL F+ MR GV N++T+V VL+AC G L
Sbjct: 510 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 569
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+E G L+ + + G ++ ++ + A+ G + ++D N + + +I+ W ++L
Sbjct: 570 LERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAML 627
Query: 552 ASCKTHGNVDVGKRAAENILKI 573
A+ HG+ E +LK+
Sbjct: 628 AANAHHGH-------GEEVLKL 642
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 218/498 (43%), Gaps = 67/498 (13%)
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCS 157
LGR++ ++ S + + N +++M G G+++ A +FD+M +R+ +SW ++ A +
Sbjct: 268 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 327
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLI 217
QNG + ++ M + + T +++ + GR +H V+K S +
Sbjct: 328 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 387
Query: 218 SQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLAS 277
N L+ MY R ++A VF + KD L S
Sbjct: 388 VCNTLLRMYAGAGRSVEANLVFKQMPTKD----------------------------LIS 419
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII 337
WN+++A + + +A+ L M + +T S L AC +P +G +H ++
Sbjct: 420 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 479
Query: 338 KKGFYSNVPVCNAILQ--HQAGELFRLFSLML-----------------ASQTKPD---- 374
G + N + NA++ + GE+ ++L A PD
Sbjct: 480 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 539
Query: 375 -------------HITFNDVMGACAAMAS-LEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
+IT V+ AC LE G LH YI+ G D V N L+ MY
Sbjct: 540 AFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 599
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCG L S+++LFN +++ ++++W++++ A G GEE LKL +MRS GV + +
Sbjct: 600 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 659
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
L+A + + ++EEG QL+ + + G + D+ ++ G + E + +
Sbjct: 660 EGLSAAAKLAVLEEGQQLHGLAV-KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SV 717
Query: 541 DDDIVVWKSLLASCKTHG 558
+ + W L+++ HG
Sbjct: 718 NRSLPSWNILISALGRHG 735
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 31/241 (12%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASL-EMGTQLHCYIMKTGLALDVFVMNGL 416
E F M KP ++ AC S+ G Q+H ++ K+GL DV+V +
Sbjct: 156 EGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAI 215
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+ +Y G + +R++F M D +VVSW+SL+VGY+ G EE + +++ S G +
Sbjct: 216 LHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD-ESLGRQ--- 271
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
++G +V+ GL+ ++N ++ +L G V A +
Sbjct: 272 --IIG--------QVVKSGLESKLAVENS------------LISMLGSMGNVDYANYIFD 309
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI-DPTNSAALVLLCNI--YASSGK 593
QM+ + D + W S+ A+ +G+++ R + + D NS + L ++ + K
Sbjct: 310 QMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 368
Query: 594 W 594
W
Sbjct: 369 W 369
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 285/548 (52%), Gaps = 67/548 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY ++ A LR ++ G KV I+ + D ++N +++MY + ++E+A+ +FDEM
Sbjct: 245 TYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEM 304
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLG 200
R+ VSW MI+G + + AI + +M Q G PD+ T S + AC+ L + LG
Sbjct: 305 TTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELG 364
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
++H +V + E G NAL+ MY K L
Sbjct: 365 DEIHNYV-RKELGFTTRIDNALLDMYAKC----------------------------GCL 395
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ AR +F+EM N+ W ++I+G +C + EA LF + R+++
Sbjct: 396 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV------------- 442
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
L+ M I+ Y+ H + LF M + KPD T
Sbjct: 443 -----LWTAM-INGYV---------------QFHHFDDAVALFREMQIQRVKPDKFTVVT 481
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ CA + +LE G +H Y+ + + +DV V L++MY KCG + + E+F +ED D
Sbjct: 482 LLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKD 541
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
SW+S+I G A G EAL+LF M G +P+ +T +GVL+ACSH GLVEEG + +
Sbjct: 542 TASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFN 601
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD-DIVV--WKSLLASCKTH 557
M+ + I P E CV+DLL RAG + EAE+ I ++ ++ +IVV + +LL++C+ H
Sbjct: 602 SMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIH 661
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
NVD+G+R A+ + I+ +S+ LL NIYAS +WE+ ++ MKE GV+K+PG S
Sbjct: 662 NNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSL 721
Query: 618 IEIQTKIH 625
IE+ +H
Sbjct: 722 IEVDGIVH 729
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 61/325 (18%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
++ A ++ D R W+ + S + + +A+ F +Q N + +T +
Sbjct: 294 VENAKKLFDEMTTRDSVSWNV-MISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTL 352
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM------ 141
SAC++L++L+LG ++H+++ + + N +L+MY KCG L AR +FDEM
Sbjct: 353 SACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVI 411
Query: 142 -------------------------PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
P R+VV WTAMI G Q + A+ L+ +M
Sbjct: 412 CWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQR 471
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+ PD+FT +++ C+ L + G+ +H ++ ++ ++ ALI MY+K + +
Sbjct: 472 VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 531
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+F + KD SW S II G+A +EA+
Sbjct: 532 EIFYELEDKDTASWTS----------------------------IICGLAMNGKTSEALR 563
Query: 297 LFSEMGDRELIPDGLTVRSLLCACT 321
LFSEM PD +T +L AC+
Sbjct: 564 LFSEMERVGAKPDDITFIGVLSACS 588
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 60 YNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
+++A+ F +Q R++P T L++ C+ L +L+ G+ +H ++ ++ D V+
Sbjct: 457 FDDAVALFREMQIQ---RVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVV 513
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
++ MY KCG ++ + +F E+ ++ SWT++I G + NG+ + A+ L+ +M + G
Sbjct: 514 GTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGA 573
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQL 203
PD TF ++ ACS V GR+
Sbjct: 574 KPDDITFIGVLSACSHGGLVEEGRRF 599
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/604 (28%), Positives = 299/604 (49%), Gaps = 67/604 (11%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
Y E L F +++ N + + + AC+S ++G ++ + + + + +
Sbjct: 111 YRETLELFGLMRSR-NLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGS 169
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+++ K G + +A+ VFD MP ++VV W ++I G Q G + A +L+ +M SG+ P
Sbjct: 170 SMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKP 229
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
T S+I+AC G+ + LG+ +H +V+ G+ ++ + + MY+K
Sbjct: 230 SPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMG--------- 280
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
DI S AR VF +M + NL SWN +I+G E+ LF
Sbjct: 281 ------DIES-------------ARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFH 321
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------- 352
+ D T+ SLL C+ SL G +H I+ F SN+ + AI+
Sbjct: 322 RLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCG 380
Query: 353 -----------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
A + RLF+ M + +TF ++
Sbjct: 381 SLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVH 440
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVV 442
+CA + SL+ G +H ++ + G A D+ M L+DMY KCG + A +F+ DVV
Sbjct: 441 SCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVV 500
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W+S+I GY G G +A+ ++ +M G++PN T + +L+ACSH LVE+G+ L+ M
Sbjct: 501 LWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSM 560
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ ++ I P + +C+VDLL+RAGR EA+ I +M F V ++LL+ C+TH N+++
Sbjct: 561 ERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINL 620
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
G + ++ +L +D N ++L NIYA + +W++V + G M+ RG++K PG S +E
Sbjct: 621 GIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGN 680
Query: 623 KIHA 626
+H
Sbjct: 681 WVHT 684
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 235/531 (44%), Gaps = 78/531 (14%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+ H I+++ D + ++ Y SLE AR VFD+ Q + AM+ G Q+
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G+ +EL+ M L D + ++AC+ +G ++ + ++ +
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
+++I+ KF +I +A VF + KD+ W S+I G+ +
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQ-------------------- 208
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
A C + A LF EM + P +T+ SL+ AC +L G +H Y++
Sbjct: 209 ------AGCFDV--AFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGL 260
Query: 340 G---------------------------FYS---------NVPVCNAILQHQAGELFRLF 363
G FY N + + GE F LF
Sbjct: 261 GLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLF 320
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
++ S D T ++ C+ ASL G LH +++ ++ + ++D+Y KC
Sbjct: 321 HRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKC 379
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
GSL A +FN M+D +V++W++++VG AQ G E+AL+LF +M+ G+ N VT V ++
Sbjct: 380 GSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLV 439
Query: 484 TACSHVGLVEEGL----QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+C+H+G ++ G L+R+ G + +VD+ A+ G+++ AE + +
Sbjct: 440 HSCAHLGSLKRGRSIHGHLFRL-----GFAFDIVNMTALVDMYAKCGKINLAERIFSHGS 494
Query: 540 FDDDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCN 586
D+V+W S++ HG+ V + + E LK + T +L+ C+
Sbjct: 495 ISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACS 545
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 6/256 (2%)
Query: 339 KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
KG N +C + + E LF LM + + D + + ACA+ EMG ++
Sbjct: 94 KGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEII 153
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
++ G+ + FV + ++ VK G +G A+ +F+ M + DVV W+S+I GY Q GC +
Sbjct: 154 SSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFD 213
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
A +LF M SG++P+ +T+ ++ AC +G ++ G ++ + G+ +
Sbjct: 214 VAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLG-LGLGNDILVLTSF 272
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV----DVGKRAAENILKID 574
VD+ ++ G + A +M ++V W ++++ C +G V D+ R + D
Sbjct: 273 VDMYSKMGDIESARWVFYKMP-TRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFD 331
Query: 575 PTNSAALVLLCNIYAS 590
T +L+ C+ AS
Sbjct: 332 LTTIVSLLQGCSQTAS 347
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 278/577 (48%), Gaps = 71/577 (12%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
YN+ + + L+ I P A +++ ACS L++L+ GR VH I S +P ++
Sbjct: 311 YNQRGYSMEALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMV 370
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+++MY KCG L +AR FD R+V+SWT++I S A+E++ M G+
Sbjct: 371 QTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGV 430
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
P+ TF ++I ACS L + GR LH+ V+ + H S NAL++MY+KF R+
Sbjct: 431 EPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRV----- 485
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
DFAR VF+ + SW ++ + +++EA+ +
Sbjct: 486 -----------------------DFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEM 522
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---- 353
+S + P + L +CT+ + + IH I FY ++ + N ++
Sbjct: 523 YSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAK 582
Query: 354 -----------------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
Q G L A +P+ I F V+ +
Sbjct: 583 CGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDVQPNFIAFVPVISS 642
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA + +L G ++H + GL + ++ L++MY KCG LG ARE F+ PD +W
Sbjct: 643 CADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAW 702
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+S+ YAQFG G + L+L+R M GV+PN +TL+ VL ACSH+G++EE + M
Sbjct: 703 NSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVA 762
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFI--------NQMAFDDDIVVWKSLLASCKT 556
++GI PT E SC+ DLL R+GR+ EAE + ++ A + W S L +CKT
Sbjct: 763 DHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKT 822
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
H + AAE + ++DP +SA VLL Y+ K
Sbjct: 823 HNDWGRAAGAAEKLYELDPEDSAPYVLLSQTYSPQAK 859
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 253/554 (45%), Gaps = 83/554 (14%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S+ ++ + EAL ++ + + T+A ++SAC+ L+ ++ G+KVH I S
Sbjct: 1 MISAYAQKGYHREALELYEEM-DERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRES 59
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D VL N +LN+Y KCG LE++R +F+ M +R V +W MI Q+ A+E +
Sbjct: 60 VARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF 119
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNALIAMYT 227
+M P TF S++ AC + G+ +H + S + + I QN+L+ MY
Sbjct: 120 RRM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYG 176
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
K + DA VF I RK+ SW +MI +++ + R
Sbjct: 177 KCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYER----------------------- 213
Query: 288 CSNANEAMSLFSE-MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI---------- 336
A+ +F + M + + PD +T +L AC++ L GM+IH+ I
Sbjct: 214 -----RAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEY 268
Query: 337 ---IKKGFYSNVPVCNAIL-----------------------QHQAGELFRLFSLMLASQ 370
++ G S C +++ +Q G L
Sbjct: 269 DDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD 328
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+PD I ++V+ AC+ + +LE G +H I + V L+DMYVKCG L AR
Sbjct: 329 IEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEAR 388
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
F+ + DV+SW+SLI Y+ G EAL++F M GV PN +T V+ ACS +
Sbjct: 389 RTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLS 448
Query: 491 LVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV---- 545
+ G L+ R++ G I + +V + ++ GRV DF +M FD V
Sbjct: 449 SLLPGRALHSRVVAT--GHISDEFVGNALVSMYSKFGRV----DFA-RMVFDSIPVKRYP 501
Query: 546 VWKSLLASCKTHGN 559
W+ +L + +G+
Sbjct: 502 SWRVMLVALTQNGH 515
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 264/546 (48%), Gaps = 20/546 (3%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L+ A V R+ W + ++ + A+ F + + P TYA
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWT-AMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYA 236
Query: 85 DLISACSSLRSLQLGRKVH---DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+++ACS+L L+ G ++H I + + D VL + IL+++ +CGSL R +FD M
Sbjct: 237 GVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM 296
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R VV+WT MIA +Q G A+ELY M + PD ++++ACS L + GR
Sbjct: 297 PHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGR 353
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H+ + + L+ Q L+ MY K + +A F +D+ SW S+I +S +
Sbjct: 354 AVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHEN 413
Query: 262 FAR---TVFNEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
F R VF+ ME PN ++ T+I + S+ +L S + I D
Sbjct: 414 FGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGN 473
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQTKP 373
+L+ + + + I K + S + A+ Q+ + E ++S + +P
Sbjct: 474 ALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRP 533
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
F+ + +C A+ + +H I + D+ + N LM++Y KCG L AR +F
Sbjct: 534 GSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVF 593
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ M + + VSW+++I GYAQ G EAL+L++ M V+PN + V V+++C+ +G +
Sbjct: 594 DQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISSCADLGALV 650
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
EG +++ + ++ G+ + +V++ A+ G++ A +F + + D W S+ +
Sbjct: 651 EGQRVHARL-SDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDS-TYCPDAGAWNSMATA 708
Query: 554 CKTHGN 559
G+
Sbjct: 709 YAQFGH 714
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E L+ M P+ TF V+ ACA + +E G ++H I ++ +D + N L+
Sbjct: 13 EALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALL 72
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
++Y KCG L +R +F ME V +W+++I Y Q +EAL+ FRRM + P+ +
Sbjct: 73 NLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRMDAP---PSSI 129
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE-RRSCVVDLLARAGRVHEAEDFIN 536
T VL AC +E G ++R + I E ++ +V + + G + +AE +
Sbjct: 130 TFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFH 189
Query: 537 QMAFDDDIVVWKSLLASCKTHG----NVDV-GKRAAENILKIDPTNSAALVLLCN 586
+ + W +++ + +G ++V G +E ++ DP A ++ C+
Sbjct: 190 GIR-RKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACS 243
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 40/216 (18%)
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I YAQ G EAL+L+ M GV PN T VL+AC+ + +E G +++R ++
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 507 GIIPTRERRSCVVDLLARAG------RVHEA------------------EDFINQ----- 537
+ T ++ +++L A+ G R+ EA DF +
Sbjct: 61 ARVDTV-LQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF 119
Query: 538 --MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL---LCNIYASSG 592
M + + S+L +C + +++ GK I P A +L L +Y G
Sbjct: 120 RRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCG 179
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
E+ R+ G+R+ SW + T +G
Sbjct: 180 SLEDAERVF-----HGIRRKNAFSWTAMITAYAQNG 210
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 296/550 (53%), Gaps = 16/550 (2%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RI + L+ +C + L ++ I++ + + + + + + + AR
Sbjct: 9 RIVEEKFITLLRSCKNYERLH---QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARK 65
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+FD++PQ N +W AM G QNG + L+ ++ + MP+ FTF II++C L
Sbjct: 66 LFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEG 125
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V G ++H K S+ +LI MY+K + DA+ VF + +++ W ++I+G
Sbjct: 126 VREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIING 185
Query: 257 F---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ + R +F+ ++ W+ +I+G N A LF +M +R D ++
Sbjct: 186 YILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNR----DTMSW 241
Query: 314 RSLL--CACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLAS- 369
++L A + +++ ++ + ++ +S N + + E F ML
Sbjct: 242 NAMLNGYAVNGEVEMFE--KVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEG 299
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
P+ T V+ AC+ + +L+MG +H Y G ++FV N L+DMY KCG + +A
Sbjct: 300 HVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENA 359
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+FN ++ D++SW+++I G A G +AL +F RM+S G P+ VT VG+L+AC+H+
Sbjct: 360 VVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHM 419
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
GLV++G ++ M + Y I+P E C+VDLL RAG + +A +FI +M + D V+W +
Sbjct: 420 GLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAA 479
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LL +C+ + NV++ + A + +++++P N A V++ NIY G+ E+VARL +M++ G
Sbjct: 480 LLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGF 539
Query: 610 RKVPGQSWIE 619
RK+PG S IE
Sbjct: 540 RKLPGCSVIE 549
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 283/578 (48%), Gaps = 60/578 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S+L K EA+ ++ ++ + AC+SLR + ++VH+ +
Sbjct: 48 LISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRF 107
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIEL 168
D +L N +++MYGKC E AR+VF+ MP R+V+SWT+M A C N G A+
Sbjct: 108 GFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSM-ASCYVNCGLLREALGA 166
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ +M +G P+ T SI+ AC+ L + GR++H V+++ G ++ +AL+ MY
Sbjct: 167 FRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYAS 226
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
I A + VF+ M + SWN +I
Sbjct: 227 CLSIRQA----------------------------QLVFDSMSRRDTVSWNVLITAYFLN 258
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
+ +S+F M +S G+ S+ N +
Sbjct: 259 KECEKGLSVFGRM----------------------MSEGVGLNYASW--------NAVIG 288
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+ + + + S M S KP+ IT V+ AC + SL G Q+H YI +
Sbjct: 289 GCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQ 348
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D+ L+ MY KCG L +R +F+ M D VSW+++I+ + G GEEAL LFR M
Sbjct: 349 DLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMV 408
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
SGVRPN VT GVL+ CSH LV+EGL ++ M ++ + P + SC+VD+L+RAGR+
Sbjct: 409 DSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRL 468
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA +FI +M + W +LL C+ + NV++G+ AA + +I+ N VLL NI
Sbjct: 469 EEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNIL 528
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
S+ W E + M++RGV K PG SWI+++ ++H
Sbjct: 529 VSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHT 566
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 285/533 (53%), Gaps = 43/533 (8%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
RK+ D + Q D N +L++Y K G +ED R++FD MP R+ VS+ +I+G +
Sbjct: 77 ARKLFDEM----TQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAG 132
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
NG+ A+ ++++M + GL P ++T S++ AC+ L + G+Q+H +I G ++
Sbjct: 133 NGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFV 192
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
NAL +Y + I D AR +F+ M N+ +W
Sbjct: 193 CNALTDLYARCGEI----------------------------DQARRLFDRMVIRNVVTW 224
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N +I+G + + LF EM L PD +T S+L A + + ++ I +
Sbjct: 225 NLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIRE 284
Query: 339 KGFYSNVPVCNAIL------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
K VC I+ + + LFS ML +PD T + V+ +CA +ASL
Sbjct: 285 KD-----EVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLY 339
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G +H G+ D+ V + L+DMY KCG A +F+ M+ +VVSW+S+I GYA
Sbjct: 340 HGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYA 399
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G EAL L+ M ++P+ VT VGVL+AC H GLVEEG + + M +++G+ PT
Sbjct: 400 LNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTP 459
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ +C+V+L R+G + +A D I+ M+ + + ++W ++L+ C G++ G+ AA +++
Sbjct: 460 DHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIE 519
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++P N+ ++L N+YA+ G+W++VA + MK + V+K SWIEI ++H
Sbjct: 520 LNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVH 572
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 211/504 (41%), Gaps = 76/504 (15%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P+ T+ +++AC+ L L+ G+++H I+ + + N + ++Y +CG ++ AR
Sbjct: 151 LKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQAR 210
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI-------- 187
+FD M RNVV+W MI+G +N Q I+L+ +M S L PDQ T S+
Sbjct: 211 RLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAG 270
Query: 188 -----------IRACSGLC-------CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
IR +C C G++ A ++ SE ++ +NA YT
Sbjct: 271 YIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSE----MLLENARPDGYT-I 325
Query: 230 DRILDAWNVFSSI--------------ARKDITSWGSMIDGFSKLDFAR---TVFNEMES 272
++ + +S+ D+ +++D + K R T+F+ M++
Sbjct: 326 SSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQT 385
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
N+ SWN++I G A EA+SL+ M + L PD +T +L AC + +G +
Sbjct: 386 RNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEY 445
Query: 333 HSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+ + P C L ++G + + L+ + +P+ + + V+ C
Sbjct: 446 FCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505
Query: 390 SLEMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV-----VS 443
++ G C I ++M L +MY G + + M+ V S
Sbjct: 506 DIKHGEMAARCLIELNPFNAVPYIM--LSNMYAARGRWKDVASIRSLMKSKHVKKFSAYS 563
Query: 444 WSSLIVGYAQFGCGEEAL-----------KLFRRMRSSGVRPNHVTLV---GVLTACSHV 489
W + +F + +L R+++ +G PN ++ G +
Sbjct: 564 WIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESI 623
Query: 490 GLVEEGLQL-YRIMQNEYGIIPTR 512
E L L Y +++ +G+ P R
Sbjct: 624 NYHSEKLALAYGLIKKPHGVTPIR 647
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNE-ALVAFD--FLQNNTNFRIRPSTY- 83
+D+A +V + + W + C QN E AL+ F L+N RP Y
Sbjct: 272 IDEARKVFGEIREKDEVCWTIMIVG--CAQNGKEEDALLLFSEMLLEN-----ARPDGYT 324
Query: 84 -ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ ++S+C+ L SL G+ VH D ++ + +++MY KCG DA +F M
Sbjct: 325 ISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQ 384
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
RNVVSW +MI G + NGQ+ A+ LY ML+ L PD TF ++ AC V G++
Sbjct: 385 TRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKE 444
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 271/516 (52%), Gaps = 49/516 (9%)
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF--TFGSIIRACSGLCCVGLGRQLHAH 206
W I + G A+ L+++M S + + +++C+ L LG LHA
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 207 VIKSEHGSHLISQNALIAMYTKFD-RILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
I+S + + NAL+ +Y K LD+ + +A D+ + + R
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDS----TGVAIVDVPGSSTAFES------VRK 125
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
VF+EM ++ SWNT++ G A +EA+ +M PD T+ ++L
Sbjct: 126 VFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECAD 185
Query: 326 LYQGMQIHSYIIKKGF--------------------------YSNVPVCNAILQHQ--AG 357
+ +G+++H + + GF + N+PV + IL + AG
Sbjct: 186 VKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAG 245
Query: 358 --------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
E +F ML + +P +TF+ ++ C +ASL G QLH Y++ G +
Sbjct: 246 CAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDN 305
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
VF+ + L+DMY KCG + A +F+ M PDVVSW+++I+GYA G EAL LF RM
Sbjct: 306 VFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMEL 365
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
+PNH+T + VLTACSH GLV++G + ++ M N YGI+PT E + + D L RAG +
Sbjct: 366 GNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELD 425
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
EA +FI++M VW +LL +C+ H N + + A+ I++++P + + V+L N+Y+
Sbjct: 426 EAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYS 485
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+SG+W E A L SM+++G++K P SWIE+++K+H
Sbjct: 486 ASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLH 521
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 186/416 (44%), Gaps = 64/416 (15%)
Query: 9 CHLPRWCCEYWDAFELCML-LDQAGEVVDSFLRRFDDIWDFDLFS------SLCKQNLYN 61
C +P C Y D+ + ++ + + +S + FD++ + D+ S ++ ++
Sbjct: 96 CKVP---CSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHH 152
Query: 62 EALVAFDFLQNNTNFRIRP-----STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
EAL F++ RP ST + + C+ ++ G +VH + D
Sbjct: 153 EAL---GFVRKMCREGFRPDSFTLSTVLPIFAECADVKR---GLEVHGFAFRNGFDSDVF 206
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
+ + +++MY C + + VFD +P R+ + W +++AGC+QNG A+ ++ +MLQ+G
Sbjct: 207 VGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAG 266
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+ P TF S+I C L + G+QLHA+VI ++ ++LI MY K I A
Sbjct: 267 VRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAH 326
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+F ++ D+ SW +MI G++ + P A EA+
Sbjct: 327 CIFDKMSSPDVVSWTAMIMGYA-----------LHGP-----------------AREALV 358
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-- 354
LF M P+ +T ++L AC+ + +G + + Y VP L+H
Sbjct: 359 LFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSM--SNHYGIVPT----LEHFA 412
Query: 355 -------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+AGEL ++ + Q KP ++ ++ AC + + ++ IM+
Sbjct: 413 ALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 468
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 285/581 (49%), Gaps = 68/581 (11%)
Query: 85 DLISACSSLRSLQLGRKVHDHIL---SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+L+ C++ L+ G +H H++ S D N ++N+Y KCG AR VFD M
Sbjct: 36 ELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLM 95
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLG 200
P+RNVVSW AM+ G +G + ++L+ M+ S P++F + ++CS + G
Sbjct: 96 PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEG 155
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q H +KS SH +N L+ MY S+ G +
Sbjct: 156 KQFHGCFLKSGLMSHEFVRNTLVYMY-------------------------SLCSGNGE- 189
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A V +++ +L+ +++ ++G C E + M +L+ D +T S L C
Sbjct: 190 --AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLC 247
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----------------------- 357
++ L QIHS +++ GF S V AI+
Sbjct: 248 SNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNT 307
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E LFS M + P+ TF + + A ++ L+ G LH ++K+
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKS 367
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G V V N L++MY K GS+ AR+ F+ M D+V+W+++I G++ G G E L+ F
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAF 427
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM +G PN +T +GVL ACSHVG VE+GL + + ++ + P + +C+V LL++
Sbjct: 428 DRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSK 487
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG +AEDF+ + D+V W++LL +C N +GK+ AE + P +S VLL
Sbjct: 488 AGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLL 547
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NI+A S +WE VA + M +RGV+K PG SWI I+ + H
Sbjct: 548 SNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTH 588
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 143/324 (44%), Gaps = 35/324 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY + CS+LR L L R++H ++ + I+NMYGKCG + A+ VFD
Sbjct: 239 TYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNT 298
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+N+V T ++ Q+ A+ L+ +M + P+++TF + + + L + G
Sbjct: 299 HAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGD 358
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH V+KS + +H++ NAL+ MY K I DA FS + +DI +W +MI GFS
Sbjct: 359 LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHG 418
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
R E + F M IP+ +T +L AC+
Sbjct: 419 LGR----------------------------EGLEAFDRMMIAGEIPNRITFIGVLQACS 450
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKPDHI 376
+ QG+ + ++KK ++ P C L +AG M + + D +
Sbjct: 451 HVGFVEQGLYYFNQLMKK--FNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508
Query: 377 TFNDVMGACAAMASLEMGTQLHCY 400
+ ++ AC + +G ++ Y
Sbjct: 509 AWRALLNACYVRRNFRLGKKVAEY 532
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 292/604 (48%), Gaps = 68/604 (11%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
E+L+ F ++ F T+ + AC+ L + VH H++ S D +
Sbjct: 35 ESLLLFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++M+ KC S++ A VF+ MP+R+ +W AM++G Q+G + A L+ +M + + PD
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T ++I++ S + L +HA I+ + N I+ Y K + A VF +
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 242 IARKD--ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
I R D + SW SM +S VF E A +A L+
Sbjct: 214 IDRGDRTVVSWNSMFKAYS-------VFGE---------------------AFDAFGLYC 245
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------- 352
M E PD T +L +C +P +L QG IHS+ I G ++ N +
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 353 -----------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+ E LF M+ S KPD +T ++
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
C SLE G + G D V + N L+DMY KCGS+ AR++F+ + VV
Sbjct: 366 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+W+++I GYA G EALKLF +M +PNH+T + VL AC+H G +E+G + + IM
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ Y I P + SC+VDLL R G++ EA + I M+ D +W +LL +CK H NV +
Sbjct: 486 KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKI 545
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
++AAE++ ++P +A V + NIYA++G W+ AR+ MK+R ++K PG+S I++
Sbjct: 546 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNG 605
Query: 623 KIHA 626
K H+
Sbjct: 606 KNHS 609
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 196/458 (42%), Gaps = 79/458 (17%)
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V +W I ++ L+ +M + G P+ FTF + +AC+ L VG +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
AH+IKS S + A + M+ K + + D+A
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSV----------------------------DYAA 107
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF M + +WN +++G + ++A SLF EM E+ PD +TV +L+ + +
Sbjct: 108 KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK 167
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------------------ 354
SL +H+ I+ G V V N +
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 355 --------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+A + F L+ LML + KPD TF ++ +C +L G +H + + G
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 287
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D+ +N + MY K SAR LF+ M VSW+ +I GYA+ G +EAL LF
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEG------LQLYRIMQNEYGIIPTRERRSCVVD 520
M SG +P+ VTL+ +++ C G +E G +Y ++ I + ++D
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC------NALID 401
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++ G +HEA D + + +V W +++A +G
Sbjct: 402 MYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNG 438
>gi|242062998|ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
gi|241932619|gb|EES05764.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
Length = 662
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 290/580 (50%), Gaps = 65/580 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ AC+ LR + GR VH L++ D + N +++MY +C + A VF +
Sbjct: 110 TFTFAAKACADLRRRRHGRAVHGRALTAGFGGDGYVQNALVSMYMRCRDVVSAEAVFGAL 169
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R VSW +I GC ++G+ A+E++ M+ G+ D+ T S++ AC+ + +GR
Sbjct: 170 RSRTTVSWNTVITGCVKDGRAERALEVFETMVGRGVCIDRATVVSVLPACAQARDLHMGR 229
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMIDGFSKL 260
+H + G++ +NALI MY K + DA VF + KD+ SW +MI +
Sbjct: 230 AVHRLAVVRGLGNYAAVKNALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMIGAY--- 286
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCA 319
V N+ +A++A +L SEM E P+ +T+ LL A
Sbjct: 287 -----VLND--------------------HASKAFALGSEMLVTSEAQPNAVTMVHLLSA 321
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
CTS LS H+ I+ G S+ V A++
Sbjct: 322 CTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYAKCGYMGMIDMVVEKGSRRTETWN 381
Query: 353 --------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ Q + LF MLA +PD T V+ A A A L +HC ++
Sbjct: 382 AAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIPAYAESADLVQAKNIHCCLLIR 441
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + GL+++Y K G LG A ELF + + DVV+W+++I GY G + A+ L+
Sbjct: 442 GCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAILLY 501
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM GV PN VT+ ++ +CSH G+V+EGL+L+ M+ +G++P E C+VD+L R
Sbjct: 502 SRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRLFNDMRGVHGLMPNAEHYLCLVDMLGR 561
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AGR+ EA I M F+ VW +LL +C H NV+ G+ AA+++ +++P N VLL
Sbjct: 562 AGRIEEAYRLIQDMPFEPSTSVWSALLGACVLHENVEFGEVAAKHLFELEPDNVGNYVLL 621
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
+YA++ +W +V L M+ RG+ K PG S ++ ++++
Sbjct: 622 GKVYAAADRWSDVQDLWRVMEGRGLHKDPGSSVVDAKSEV 661
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 216/529 (40%), Gaps = 77/529 (14%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWT-AMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+L Y CG DA + +MPQ VS + ++ + G A+ LY QM
Sbjct: 51 LLGSYCACGRPFDAHNLLVQMPQPPPVSVSNTLLRSYTGLGFNRQALALYSQMRAF---- 106
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D TF +AC+ L GR +H + + G QNAL++MY + ++ A VF
Sbjct: 107 DHLTFTFAAKACADLRRRRHGRAVHGRALTAGFGGDGYVQNALVSMYMRCRDVVSAEAVF 166
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
++ S SWNT+I G A A+ +F
Sbjct: 167 GAL----------------------------RSRTTVSWNTVITGCVKDGRAERALEVFE 198
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA--------- 350
M R + D TV S+L AC L+ G +H + +G + V NA
Sbjct: 199 TMVGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYAAVKNALIDMYGKCR 258
Query: 351 ----------------------------ILQHQAGELFRLFSLML-ASQTKPDHITFNDV 381
+L A + F L S ML S+ +P+ +T +
Sbjct: 259 SLEDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLVTSEAQPNAVTMVHL 318
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ AC ++ S + H ++ GL D V L+D Y KCG +G ++
Sbjct: 319 LSACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYAKCGYMGMI-DMVVEKGSRRT 377
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+W++ I GY G++AL LF++M + VRP+ T+ V+ A + + + ++
Sbjct: 378 ETWNAAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIPAYAESADLVQAKNIHCC 437
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ G + + + + ++++ A+AG + A + Q + D+V W +++A HG+
Sbjct: 438 LLIR-GCLGSTDIATGLINVYAKAGDLGVAWELF-QCLPEKDVVAWTTVIAGYGMHGHAQ 495
Query: 562 VGKRAAENILKIDPT-NSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
++++ T N+ + L + +G +E RL M RGV
Sbjct: 496 TAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRLFNDM--RGV 542
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 124/293 (42%), Gaps = 7/293 (2%)
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMIDGFSKL 260
QLHA ++KS H H S + L+ Y R DA N+ + + ++ +++ ++ L
Sbjct: 31 QLHALLLKSGHLLHCDSIHLLLGSYCACGRPFDAHNLLVQMPQPPPVSVSNTLLRSYTGL 90
Query: 261 DFAR---TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
F R ++++M + + ++ A ++ DG +L+
Sbjct: 91 GFNRQALALYSQMRAFDHLTFTFAAKACADLRRRRHGRAVHGRALTAGFGGDGYVQNALV 150
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHI 376
+ + + + S N + + +A +F M+ D
Sbjct: 151 SMYMRCRDVVSAEAVFGALRSRTTVSWNTVITGCVKDGRAERALEVFETMVGRGVCIDRA 210
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T V+ ACA L MG +H + GL V N L+DMY KC SL A+ +F+
Sbjct: 211 TVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYAAVKNALIDMYGKCRSLEDAKRVFDED 270
Query: 437 E-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNHVTLVGVLTACS 487
D DVVSW+++I Y +A L M +S +PN VT+V +L+AC+
Sbjct: 271 SYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLVTSEAQPNAVTMVHLLSACT 323
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 25/305 (8%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C + VV+ RR + W+ + S + +AL F + + +R
Sbjct: 355 DCYAKCGYMGMIDMVVEKGSRR-TETWNAAI-SGYTHREQGKKALALFKQMLAES---VR 409
Query: 80 P--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P +T A +I A + L + +H +L C + ++N+Y K G L A +
Sbjct: 410 PDSATMASVIPAYAESADLVQAKNIHCCLLIRGCLGSTDIATGLINVYAKAGDLGVAWEL 469
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F +P+++VV+WT +IAG +G AI LY +M++ G+ P+ T S++ +CS V
Sbjct: 470 FQCLPEKDVVAWTTVIAGYGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMV 529
Query: 198 GLGRQLHAHVIKSEHGSHLISQNA-----LIAMYTKFDRILDAWNVFSSIARKDITS-WG 251
G +L G H + NA L+ M + RI +A+ + + + TS W
Sbjct: 530 DEGLRL----FNDMRGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRLIQDMPFEPSTSVWS 585
Query: 252 SMIDG---FSKLDF----ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+++ ++F A+ +F E+E N+ ++ + A+ ++ L+ M R
Sbjct: 586 ALLGACVLHENVEFGEVAAKHLF-ELEPDNVGNYVLLGKVYAAADRWSDVQDLWRVMEGR 644
Query: 305 ELIPD 309
L D
Sbjct: 645 GLHKD 649
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS-SLIVGYAQF 454
QLH ++K+G L ++ L+ Y CG A L M P VS S +L+ Y
Sbjct: 31 QLHALLLKSGHLLHCDSIHLLLGSYCACGRPFDAHNLLVQMPQPPPVSVSNTLLRSYTGL 90
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRE 513
G +AL L+ +MR+ +H+T AC+ + G ++ R + +G
Sbjct: 91 GFNRQALALYSQMRAF----DHLTFTFAAKACADLRRRRHGRAVHGRALTAGFG--GDGY 144
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
++ +V + R V AE + V W +++ C G +
Sbjct: 145 VQNALVSMYMRCRDVVSAEAVFGALR-SRTTVSWNTVITGCVKDGRAE 191
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/664 (27%), Positives = 318/664 (47%), Gaps = 88/664 (13%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEA----LVAFDFLQ 71
C + + C L++A +V +W+ + +L + L + F FL+
Sbjct: 172 CALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLK 231
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
T +T ++ AC + +L +++H ++ D L N +++MY K G L
Sbjct: 232 AET------ATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKL 285
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG------ 185
E AR VFD M RN SW +MI+ + G N A L+ ++ S + PD T+
Sbjct: 286 ELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGH 345
Query: 186 -----------------------------SIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
S+++A S L + +G++ H +V+++ +
Sbjct: 346 FLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDV 405
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMES- 272
+LI MY K + A VF ++ ++I +W S++ G+S + A + N+ME
Sbjct: 406 YVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE 465
Query: 273 ---PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
P+L +WN +I+G A EA+++ + L P+ ++ +L+ +
Sbjct: 466 GIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSS-------- 517
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQAG---ELFRLFSLMLASQTKPDHITFNDVMGACA 386
QAG + + F+ M P+ + ++ ACA
Sbjct: 518 -------------------------QAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACA 552
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+++ L+ G ++HC ++ G DVFV L+DMY K SL +A ++F +++ + SW+
Sbjct: 553 SLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNC 612
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I+G+A FG G+EA+ +F M+ GV P+ +T +L+AC + GL+ EG + + M +Y
Sbjct: 613 MIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDY 672
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
I+P E C+VDLL RAG + EA D I+ M D +W +LL SC+ H N+ + A
Sbjct: 673 RIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETA 732
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
A+N+ K++P NSA +L+ N+Y+ +WE++ L M GVR SWI+I ++H
Sbjct: 733 AKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHV 792
Query: 627 SGND 630
+D
Sbjct: 793 FSSD 796
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 215/465 (46%), Gaps = 52/465 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y+ + C+ + + LG ++H ++ D L ++N YG+C LE A VF EM
Sbjct: 135 VYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM 194
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P + W I Q+ + +EL+ +M S L + T +++AC + + +
Sbjct: 195 PNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAK 254
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +V + S + N LI+MY+K ++ A VF S+ ++ +SW SMI ++ L
Sbjct: 255 QIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALG 314
Query: 262 F---ARTVFNEMES----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
F A ++F E+ES P++ +WN +++G E +++ M P+ ++
Sbjct: 315 FLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMT 374
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
S+L A + L G + H Y+++ GF +V V +++
Sbjct: 375 SVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM-------------------- 414
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
++ + + A A +++ ++F N L+ Y G A L N
Sbjct: 415 YVKNHSLTSAQAVFDNMK--------------NRNIFAWNSLVSGYSFKGMFEDALRLLN 460
Query: 435 FME----DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
ME PD+V+W+ +I GYA +GCG+EAL + + +S G+ PN V+ +++ S G
Sbjct: 461 QMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAG 520
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCV------VDLLARAGRVH 529
+ L+ + MQ E G++P +C+ + LL + +H
Sbjct: 521 NNRDSLKFFAQMQQE-GVMPNSASITCLLRACASLSLLQKGKEIH 564
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 195/441 (44%), Gaps = 49/441 (11%)
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
S+ + + S ++ M+ + ++ WN + A+ I+S+ GF A VF
Sbjct: 37 SDDSNVITSLTSVKMMHAQMIKLPQKWNP-DAAAKNLISSY----LGFGDFWSAAMVFYV 91
Query: 270 MESPNLASWNTIIAGVASCSNA-NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
N WN+ + S + + + + +F E+ + ++ D L CT + ++
Sbjct: 92 GLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWL 151
Query: 329 GMQIHSYIIKKGF--------------------------YSNVPVCNAILQHQAGEL--- 359
GM+IH +IK+GF + +P A+L ++A L
Sbjct: 152 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 211
Query: 360 -------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
LF M S K + T V+ AC M +L Q+H Y+ + GL DV +
Sbjct: 212 SEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSL 271
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+ MY K G L AR +F+ ME+ + SW+S+I YA G +A LF + SS +
Sbjct: 272 CNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDM 331
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH--- 529
+P+ VT +L+ G EE L + + MQ E G P + V+ ++ G ++
Sbjct: 332 KPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGK 390
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
E ++ + FD D+ V SL+ + ++ + +N + N A L + Y+
Sbjct: 391 ETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDN---MKNRNIFAWNSLVSGYS 447
Query: 590 SSGKWEEVARLMGSMKERGVR 610
G +E+ RL+ M++ G++
Sbjct: 448 FKGMFEDALRLLNQMEKEGIK 468
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 279/520 (53%), Gaps = 31/520 (5%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN--AAIELYVQMLQSG 176
N ++ + G + AR VFD MP R+VVSW A++ + G+ + AA L+ + + S
Sbjct: 19 NQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPS- 77
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
D ++ SII C + A K ++ + NA++A + R DA
Sbjct: 78 --RDVVSWNSIIAGCLAHGDLDAASAYFAGAPKR----NVATWNAMLAGLLRLGRADDAD 131
Query: 237 NVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+F + ++++ S+ +M+DG ++ + AR VF+ M NL SW +I+G E
Sbjct: 132 RLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVE 191
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY--QG-----MQIHSYIIKKGFYS-NV 345
A LF M ++ ++ ACT+ ++ Y QG ++ I K S N
Sbjct: 192 ATKLFEAMPEKNVV-----------ACTAMITSYCKQGDVESARRLFDGIRAKDVISWNT 240
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ + E RL ++M KPDH T V+ AC+A+A L G H +K
Sbjct: 241 MIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAM 300
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L + N LM MY KCG++G + +F + D+VSW+++I YAQ G ++ + LF
Sbjct: 301 LESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFH 360
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M +G+ P+ +T + VL+AC HVG V+ L+L+ +M ++Y I P E +C+VD+L+RA
Sbjct: 361 EMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRA 420
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ +A +I M + + VW SLL +C+ HGNV +G+ AA+ +++ D +S V+L
Sbjct: 421 GQLEKASSYIKDMPLEAEKNVWGSLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILS 480
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA++G W +V ++ G MKERGV+K PG SW EI ++H
Sbjct: 481 NIYAAAGMWGQVNQVRGQMKERGVKKQPGYSWTEIANEVH 520
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 35 VDSFLRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
V+S R FD I D+ S + N + E + + + +T +++A
Sbjct: 220 VESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTA 279
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
CS+L L+ G+ H + + + N ++ MY KCG++ ++ +VF + +++VSW
Sbjct: 280 CSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSW 339
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+IA +Q+G+ I L+ +M +GL+PD TF S++ AC
Sbjct: 340 NTIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSAC 381
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 301/565 (53%), Gaps = 42/565 (7%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSL----QLGRKVHDH 105
L L +Q EA+ F ++ + + +Y L+SAC+ L + GR+VH +
Sbjct: 223 LMVGLVRQKCGEEAVEVFKETRHLVDINV--DSYVILLSACAEFALLDEGRRKGREVHGY 280
Query: 106 ILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ + V + N ++NMY KCG ++ AR VF M ++ VSW +MI G QN
Sbjct: 281 AIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFED 340
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
A++ Y M ++GLMP FT S + +C+ L C+ LG+Q H IK + N L+A
Sbjct: 341 AVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLA 400
Query: 225 MYTKFDRILDAWNVFSSIARKDITSW----GSMIDGFSKLDFARTVFNEME----SPNLA 276
+Y + + + VFS + +D SW G++ D + + A VF EM SPN
Sbjct: 401 LYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRV 460
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
++ ++A V+S S + + + + + + D +LL + +I S +
Sbjct: 461 TFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM 520
Query: 337 IKK-----------GFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
++ G+ N +C A+ L LM+ + D TF V+ AC
Sbjct: 521 SERRDEVSWNSMISGYIHNDLLCKAM---------DLVWLMMQRGQRLDCFTFATVLSAC 571
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A +A+LE G ++H ++ L DV + + L+DMY KCG + A FN M ++ SW+
Sbjct: 572 ATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWN 631
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
S+I GYA+ G G+ AL+LF RM+ SG P+H+T VGVL+ACSH+GLV+EG + ++ M
Sbjct: 632 SMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEV 691
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL-ASCKTHG-NVDVG 563
YG++P E SC+VDLL RAG + + ++FIN+M +I++W+++L A C+ +G ++G
Sbjct: 692 YGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTVLGACCRGNGRKTELG 751
Query: 564 KRAAENILKIDPTNSAALVLLCNIY 588
+RAAE + +DP N+ + NIY
Sbjct: 752 RRAAEMLFNMDPQNA-----VMNIY 771
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 222/472 (47%), Gaps = 89/472 (18%)
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVG 198
MP RN V+W +I+G +QNG + A + +M+ G +P++F FGS IRAC S LC +
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LG Q+H ++KS + + N LI+MY K+
Sbjct: 61 LGMQIHGLILKSPYANDASLCNVLISMYGKY---------------------------LG 93
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS--EMGDR--ELIPDGLTVR 314
+D+AR+VF+E+E N WN+I++ + +A LFS +M D L P+ T
Sbjct: 94 YIDYARSVFDEIEIRNSIYWNSIVSVYSQRGDAASCFELFSSMQMADSGLSLKPNEYTFG 153
Query: 315 SLLCACTSPLSLYQGM----QIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
SL+ A S S+ G+ QI + I K G +N+ V +A+ AG RL S A +
Sbjct: 154 SLITAACS--SVDSGLSLLGQILARIKKSGLLANLYVGSAL----AGGFSRLGSFDYARK 207
Query: 371 -----TKPDHITFNDVM----------------------------------GACAAMASL 391
T + ++ N +M ACA A L
Sbjct: 208 IFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKETRHLVDINVDSYVILLSACAEFALL 267
Query: 392 E----MGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+ G ++H Y ++TGL V V NGL++MY KCG + AR +F M D D VSW+S
Sbjct: 268 DEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNS 327
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I G Q C E+A+K + MR +G+ P++ TL+ L++C+ +G + G Q + +
Sbjct: 328 MITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHG-EGIKL 386
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
G+ + ++ L A G + E + + M + D V W +++ + G
Sbjct: 387 GLDMDVSVSNTLLALYAETGHLAECQKVFSWM-LERDQVSWNTVIGALADSG 437
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 244/529 (46%), Gaps = 95/529 (17%)
Query: 82 TYADLISAC--SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK-CGSLEDARMVF 138
+ I AC S L LQLG ++H IL S DA L N +++MYGK G ++ AR VF
Sbjct: 43 AFGSAIRACQESMLCGLQLGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVF 102
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELY--VQMLQSG--LMPDQFTFGSIIRAC--- 191
DE+ RN + W ++++ SQ G + EL+ +QM SG L P+++TFGS+I A
Sbjct: 103 DEIEIRNSIYWNSIVSVYSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSS 162
Query: 192 --SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
SGL +G Q+ A + KS ++L +AL
Sbjct: 163 VDSGLSLLG---QILARIKKSGLLANLYVGSALAG------------------------- 194
Query: 250 WGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
GFS+L D+AR +F +M + N S N ++ G+ EA+ +F E R L
Sbjct: 195 ------GFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKET--RHL 246
Query: 307 IPDGLTVRSLLCACTSPLSLY-----QGMQIHSYIIKKGFY-SNVPVCNAILQHQA--GE 358
+ + +L + + +L +G ++H Y I+ G + V V N ++ A G+
Sbjct: 247 VDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGD 306
Query: 359 L---FRLFSLMLAS-------------QTK------------------PDHITFNDVMGA 384
+ +F LM+ Q K P + T + +
Sbjct: 307 IDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSS 366
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA++ + +G Q H +K GL +DV V N L+ +Y + G L +++F++M + D VSW
Sbjct: 367 CASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSW 426
Query: 445 SSLIVGYAQFGCG-EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
+++I A G EA+++F M +G PN VT + +L S + + Q++ ++
Sbjct: 427 NTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALIL 486
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+Y + + ++ ++G + E+ ++M+ D V W S+++
Sbjct: 487 -KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 534
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/558 (25%), Positives = 255/558 (45%), Gaps = 51/558 (9%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISA-C 90
+V + +R D F+LFSS+ ++ ++P+ T+ LI+A C
Sbjct: 116 IVSVYSQRGDAASCFELFSSM---------------QMADSGLSLKPNEYTFGSLITAAC 160
Query: 91 SSLRS-LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
SS+ S L L ++ I S + + + + + + GS + AR +F++M RN VS
Sbjct: 161 SSVDSGLSLLGQILARIKKSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSM 220
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVG----LGRQLH 204
++ G + A+E++ + + D + ++ AC+ + GR++H
Sbjct: 221 NGLMVGLVRQKCGEEAVEVFKETRHLVDINVDSYVI--LLSACAEFALLDEGRRKGREVH 278
Query: 205 AHVIKSE-HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---L 260
+ I++ + + + N LI MY K I A +VF + KD SW SMI G +
Sbjct: 279 GYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCF 338
Query: 261 DFARTVFNEMESPNLASWN-TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV-----R 314
+ A +N M L N T+I+ ++SC A+ L + E I GL +
Sbjct: 339 EDAVKSYNSMRKTGLMPSNFTLISALSSC--ASLGCILLGQQTHGEGIKLGLDMDVSVSN 396
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTK 372
+LL L + ++ S+++++ S V A+ A E +F M+ +
Sbjct: 397 TLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWS 456
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P+ +TF +++ +++++ ++ Q+H I+K + D + N L+ Y K G + + E+
Sbjct: 457 PNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEI 516
Query: 433 FNFM-EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
F+ M E D VSW+S+I GY +A+ L M G R + T VL+AC+ V
Sbjct: 517 FSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVAT 576
Query: 492 VEEGLQLY----RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+E G++++ R +I S +VD+ ++ GR+ A F N M ++ W
Sbjct: 577 LERGMEVHACAIRACLESDVVIG-----SALVDMYSKCGRIDYASRFFNLMPM-RNLYSW 630
Query: 548 KSLLASCKTHGNVDVGKR 565
S+++ HG D R
Sbjct: 631 NSMISGYARHGYGDNALR 648
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/573 (30%), Positives = 277/573 (48%), Gaps = 71/573 (12%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVL 117
YN+ + + L+ I P A +++ ACS L++L+ GR VH I S +P ++
Sbjct: 377 YNQRGYSMEALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMV 436
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+++MY KCG L +AR FD R+V+SWT++I S A+E++ M G+
Sbjct: 437 QTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGV 496
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
P+ TF ++I ACS L + GR LH+ V+ + H S NAL++MY+KF R+
Sbjct: 497 EPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRV----- 551
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
DFAR VF+ + SW ++ + +++EA+ +
Sbjct: 552 -----------------------DFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEM 588
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ---- 353
+S + P + L +CT+ + + IH I FY ++ + N ++
Sbjct: 589 YSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAK 648
Query: 354 -----------------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
Q G L A +P+ I F V+ +
Sbjct: 649 CGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDVQPNFIAFVPVISS 708
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA + +L G ++H + GL + ++ L++MY KCG LG ARE F+ PD +W
Sbjct: 709 CADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAW 768
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
+S+ YAQFG G + L+L+R M GV+PN +TL+ VL ACSH+G++EE + M
Sbjct: 769 NSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVA 828
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFI--------NQMAFDDDIVVWKSLLASCKT 556
++GI PT E SC+ DLL R+GR+ EAE + ++ A + W S L +CKT
Sbjct: 829 DHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKT 888
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
H + AAE + ++DP +SA VLL Y+
Sbjct: 889 HNDWGRAAGAAEKLYELDPEDSAPYVLLSQTYS 921
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 251/530 (47%), Gaps = 87/530 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A ++SAC+ L+ ++ G+KVH I S + D VL N +LN+Y KCG LE++R +F+ M
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+R V +W MI Q+ A+E + +M P TF S++ AC + G+
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGK 117
Query: 202 QLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
+H + S + + I QN+L+ MY K + DA VF I RK+ SW +MI +++
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE-MGDRELIPDGLTVRSLLC 318
+ R A+ +F + M + + PD +T +L
Sbjct: 178 NGYER----------------------------RAIEVFGDMMSEGRVEPDPITYAGVLT 209
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYS------------------------------NVPVC 348
AC++ L GM+IH+ I KG S +V +
Sbjct: 210 ACSTLGDLETGMRIHALIRSKGVESAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIW 269
Query: 349 NA-----ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
A + Q+G LF M A + +++TF+ ++ AC+ + E G + I
Sbjct: 270 TAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYT 329
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
GL D + +G++ ++ +CGSL RE+F+ M VV+W+++I Y Q G EAL+L
Sbjct: 330 LGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALEL 389
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLL 522
+ M + P+ + L VL ACS + +E+G ++ RI ++ P+ ++ +VD+
Sbjct: 390 YHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFE--PSLMVQTLLVDMY 444
Query: 523 ARAGRVHEAEDFINQMAFDD----DIVVWKSLLASCKTHGNVDVGKRAAE 568
+ G + EA + FD D++ W SL+ + + + + G+ A E
Sbjct: 445 VKCGDLAEA-----RRTFDGFKARDVISWTSLITA---YSHENFGREALE 486
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 242/514 (47%), Gaps = 72/514 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ +++ACS+L + G+ + D I + + D VL + IL+++ +CGSL R +FD M
Sbjct: 303 TFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM 362
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R VV+WT MIA +Q G A+ELY M + PD ++++ACS L + GR
Sbjct: 363 PHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGR 419
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H+ + + L+ Q L+ MY K + +A F +D+ SW S+I +S +
Sbjct: 420 AVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHEN 479
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F R EA+ +F M + P+ +T +++ AC+
Sbjct: 480 FGR----------------------------EALEVFHSMELEGVEPNSITFCTVIDACS 511
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------------- 352
SL G +HS ++ G S+ V NA++
Sbjct: 512 RLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRV 571
Query: 353 -------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ E ++S + +P F+ + +C A+ + +H I +
Sbjct: 572 MLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSD 631
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
D+ + N LM++Y KCG L AR +F+ M + + VSW+++I GYAQ G EAL+L++
Sbjct: 632 FYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYK 691
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M V+PN + V V+++C+ +G + EG +++ + ++ G+ + +V++ A+
Sbjct: 692 AM---DVQPNFIAFVPVISSCADLGALVEGQRVHARL-SDAGLQNNEVIVTALVNMYAKC 747
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
G++ A +F + + D W S+ + G+
Sbjct: 748 GKLGLAREFFDS-TYCPDAGAWNSMATAYAQFGH 780
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/606 (24%), Positives = 266/606 (43%), Gaps = 40/606 (6%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L+ A V R+ W + ++ + A+ F + + P TYA
Sbjct: 147 CGSLEDAERVFHGIRRKNAFSWT-AMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYA 205
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++ACS+L L+ G ++H ++ SK A++ ++++YGK G EDA VF+ + R
Sbjct: 206 GVLTACSTLGDLETGMRIH-ALIRSKGVESAMVSTGLIDLYGKWGFFEDALQVFESVRDR 264
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+VV WTA IA C +GQ A+EL+ +M GL + TF I+ ACS L G+ +
Sbjct: 265 DVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIE 324
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF-- 262
+ + Q+ +++++ + ++ +F + + + +W +MI +++ +
Sbjct: 325 DRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSM 384
Query: 263 -ARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A +++ M+ P+ + + ++ + N + ++ S + R+ P L V++LL
Sbjct: 385 EALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEP-SLMVQTLLVDM 443
Query: 321 TSPLS-LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-ELFRLFSLMLASQTKPDHITF 378
L + + + S + A G E +F M +P+ ITF
Sbjct: 444 YVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITF 503
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
V+ AC+ ++SL G LH ++ TG D FV N L+ MY K G + AR +F+ +
Sbjct: 504 CTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPV 563
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV--------- 489
SW ++V Q G EAL+++ R+ G RP L +C+ +
Sbjct: 564 KRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAI 623
Query: 490 -GLVEEG-----LQLYRIMQNEYGIIPTRERRSCVVDLL---------------ARAGRV 528
G+++ L L ++ N Y E V D + A+ GR
Sbjct: 624 HGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRP 683
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL-LCNI 587
EA + M + + + +++SC G + G+R + N+ +V L N+
Sbjct: 684 AEALELYKAMDVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNM 743
Query: 588 YASSGK 593
YA GK
Sbjct: 744 YAKCGK 749
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/627 (31%), Positives = 302/627 (48%), Gaps = 76/627 (12%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD I D++ S+ ++EA+ F L + R T+ ++ AC +L
Sbjct: 174 FDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 233
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
GR++H Q + + +++MY + G AR +FD+MP R++ SW AMI+G
Sbjct: 234 ---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
QNG A+++ +M G+ + T SI+ C L + +H +VIK
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
L NALI MY KF + DA R F +M ++
Sbjct: 351 LFVSNALINMYAKFGNLEDA----------------------------RKAFQQMFITDV 382
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWN+IIA + A F +M PD LT+ SL +H +
Sbjct: 383 VSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGF 442
Query: 336 IIKKGFY-SNVPVCNAILQ-----------HQ-------------------------AGE 358
I+++G+ +V + NA++ H+ A E
Sbjct: 443 IMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASE 502
Query: 359 LFRLFSLMLA-SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
++ +M + P+ T+ ++ A A + +L+ G ++H ++KT L LDVFV L+
Sbjct: 503 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLI 562
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
D+Y KCG L A LF + V+W+++I + G E+ LKLF M GV+P+HV
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 622
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T V +L+ACSH G VEEG +R+MQ EYGI P+ + C+VDLL RAG + A FI
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKD 681
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M D +W +LL +C+ HGN+++GK A++ + ++D N VLL NIYA+ GKWE V
Sbjct: 682 MPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGV 741
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKI 624
++ +ERG++K PG S IE+ K+
Sbjct: 742 DKVRSLARERGLKKTPGWSTIEVNRKV 768
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 258/552 (46%), Gaps = 88/552 (15%)
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+++ K Q + ++N+Y G + +R FD++PQ++V +W +MI+ NG + A
Sbjct: 143 VVAGKVQ-SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEA 201
Query: 166 IELYVQ-MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
I + Q +L S + PD +TF +++AC L GR++H K ++ +LI
Sbjct: 202 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIH 258
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY++F F+ IAR ++F++M ++ SWN +I+G
Sbjct: 259 MYSRFG--------FTGIAR--------------------SLFDDMPFRDMGSWNAMISG 290
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+ NA +A+ + EM + + +TV S+L C + M IH Y+IK G +
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350
Query: 345 VPVCNAILQ--------HQAGELFR----------------------------LFSLMLA 368
+ V NA++ A + F+ F M
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLG 427
+ +PD +T + A + +H +IM+ G L DV + N ++DMY K G L
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTAC 486
SA ++F + DV+SW++LI GYAQ G EA+++++ M + PN T V +L A
Sbjct: 471 SAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530
Query: 487 SHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
+HVG +++G++++ R+++ + +C++D+ + GR+ +A Q+ + V
Sbjct: 531 AHVGALQQGMRIHGRVIKTNLHL--DVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSV 587
Query: 546 VWKSLLASCKTHGNVD-----VGKRAAENILKIDPTNSAALVLLCNI--YASSGKWEEVA 598
W ++++ HG+ + G+ E + K D +L+ C+ + GKW
Sbjct: 588 TWNAIISCHGIHGHAEKTLKLFGEMLDEGV-KPDHVTFVSLLSACSHSGFVEEGKW--CF 644
Query: 599 RLMGSMKERGVR 610
RL M+E G++
Sbjct: 645 RL---MQEYGIK 653
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LH ++ G +F+ L+++Y G + +R F+ + DV +W+S+I Y G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197
Query: 457 GEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EA+ F + + S +RP+ T VL AC G + +G +++ + G
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIH-CWAFKLGFQWNVFVA 253
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++ + +R G A + M F D+ W ++++ +GN
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPF-RDMGSWNAMISGLIQNGN 296
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 308/619 (49%), Gaps = 71/619 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L S + L +++ F ++ R +T LIS C+S + G VH L +
Sbjct: 217 LVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRT 276
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ N ++NMY G L DA +F M +R+++SW MI+ QNG A++
Sbjct: 277 GLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTL 336
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
Q+L + PD+ TF S + ACS + GR +HA ++ +L+ N+LI MY K
Sbjct: 337 GQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKC 396
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ I DA +F + D+ S N +I A
Sbjct: 397 NSIEDAERIFQLMPNHDVVSC----------------------------NILIGSYAVLE 428
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVC 348
+ +AM +F M E+ + +T+ ++L + TS L G+ +H+Y I GF S+ V
Sbjct: 429 DGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVS 488
Query: 349 NAIL-----------------------------------QHQAGE-LFRLFSLMLASQTK 372
N+++ QH GE +LF M
Sbjct: 489 NSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNG 548
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
DHI + M + A++ASLE G QLH +K GL D V+N MDMY KCG + E+
Sbjct: 549 LDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMD---EM 605
Query: 433 FNFMEDPDVVS---WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+ DP + W++LI GYA++G +EA + F+ M S G P++VT V +L+ACSH
Sbjct: 606 LKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHA 665
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
GLV++G+ Y M + +G+ P + C+VD+L R GR EAE FI M + ++W+S
Sbjct: 666 GLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRS 725
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LL+S +TH N+D+G++AA+ +L++DP + +A VLL N+YA+S +W +V R+ MK +
Sbjct: 726 LLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINL 785
Query: 610 RKVPGQSWIEIQTKIHASG 628
K+P SW++ + ++ G
Sbjct: 786 NKIPACSWLKQKKEVSTFG 804
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 145/598 (24%), Positives = 260/598 (43%), Gaps = 103/598 (17%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ +A ++S C SL G +V H++ S Q + N +++M G G + DA +F
Sbjct: 146 NAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYR 205
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGL 199
M +R+ VSW A+++ S G + + ++ M + GL+ D T S+I C+ V
Sbjct: 206 MEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSY 265
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G +H+ +++ S++ NAL+ MY+ ++ DA +F +++R+D+ S
Sbjct: 266 GSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLIS---------- 315
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
WNT+I+ N +A+ ++ PD +T S L A
Sbjct: 316 ------------------WNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGA 357
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL--------- 362
C+SP +L G +H+ ++ + N+ V N+++ A +F+L
Sbjct: 358 CSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSC 417
Query: 363 -------------------FSLMLASQTKPDHITFNDVMGACAAMASLE-MGTQLHCYIM 402
F M + K ++IT +++G+ + L G LH Y +
Sbjct: 418 NILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTI 477
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
G D +V N L+ MY KCG L S+ +F + + VVSW+++I Q G GEE+LK
Sbjct: 478 HAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLK 537
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI-----MQNEYGII-------- 509
LF MR G +H+ L +++ + + +EEG+QL+ + + N+ ++
Sbjct: 538 LFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYG 597
Query: 510 --------------PTRERRSC---VVDLLARAGRVHEAEDFINQM---AFDDDIVVWKS 549
P + C ++ AR G EAE+ M D V + +
Sbjct: 598 KCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVT 657
Query: 550 LLASCKTHGNVDVG---KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
LL++C G VD G + ++ + P V + +I G++ E + + M
Sbjct: 658 LLSACSHAGLVDKGIDYYNSMSSVFGVSP-GIKHCVCIVDILGRLGRFAEAEKFIEDM 714
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 232/515 (45%), Gaps = 69/515 (13%)
Query: 84 ADLISACSSLRSLQL-GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
A L++AC + G +H + + + +L++YG + DA+ +F EMP
Sbjct: 47 ASLVTACERWEEGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMP 106
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RNVVSWTA++ S NG A+ Y +M + + + F +++ C L G Q
Sbjct: 107 ERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQ 166
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+ +HVI S + N+LI+M R+ DA +F + +D SW +++ +S
Sbjct: 167 VFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSH--- 223
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP-DGLTVRSLLCACT 321
G+ S ++ +FS+M L+ D T+ SL+ C
Sbjct: 224 --------------------EGLCS-----KSFRVFSDMRRGGLLRHDATTLCSLISVCA 258
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL-------------------- 359
S + G +HS ++ G +S +PV NA++ AG+L
Sbjct: 259 SSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNT 318
Query: 360 --------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ +L + PD +TF+ +GAC++ +L G +H ++
Sbjct: 319 MISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLS 378
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L ++ V N L+ MY KC S+ A +F M + DVVS + LI YA G +A+++F
Sbjct: 379 LHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFF 438
Query: 466 RMRSSGVRPNHVTLVGVLTA-CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
MR V+ N++T+V +L + S L GL L+ + G + + ++ + A+
Sbjct: 439 WMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHA-GFLSDDYVSNSLITMYAK 497
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
G + E+ + + Q + +V W +++A+ HG+
Sbjct: 498 CGDL-ESSNNVFQRIINRSVVSWNAMIAANVQHGH 531
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 163/402 (40%), Gaps = 74/402 (18%)
Query: 141 MP--QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC----SGL 194
MP R SW I+GC + G+++ A + M + G+ F S++ AC G
Sbjct: 1 MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
C G +HA K+ ++ AL+ +Y +LDA +F W
Sbjct: 61 AC---GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLF----------W---- 103
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
EM N+ SW ++ ++S + EA+ + M + +
Sbjct: 104 --------------EMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFA 149
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGEL------- 359
+++ C S G+Q+ S++I G V V N+++ H A +L
Sbjct: 150 TVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEER 209
Query: 360 ---------------------FRLFSLM-LASQTKPDHITFNDVMGACAAMASLEMGTQL 397
FR+FS M + D T ++ CA+ + G+ +
Sbjct: 210 DTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGV 269
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H ++TGL + V+N L++MY G L A LF M D++SW+++I Y Q G
Sbjct: 270 HSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNN 329
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+ALK ++ + P+ +T L ACS G + +G ++
Sbjct: 330 MDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVH 371
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 143/324 (44%), Gaps = 44/324 (13%)
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS-PLSLYQGMQIHS 334
+SW T I+G C + A S+ M +R + G + SL+ AC G IH+
Sbjct: 9 SSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHA 68
Query: 335 YIIKKGFYSNVPVCNAIL-----QHQAGELFRLF------------SLMLA--------- 368
K G NV + A+L Q + RLF +LM+A
Sbjct: 69 LTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEE 128
Query: 369 -----SQTKPDHI-----TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
+ + + I F V+ C ++ G Q+ +++ +GL V V N L+
Sbjct: 129 ALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLIS 188
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG-VRPNHV 477
M G + A +LF ME+ D VSW++L+ Y+ G ++ ++F MR G +R +
Sbjct: 189 MLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDAT 248
Query: 478 TLVGVLTACSHVGLVEEGLQLYR--IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
TL +++ C+ V G ++ + + IP + +V++ + AG++ +AE
Sbjct: 249 TLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPV---VNALVNMYSSAGKLADAEFLF 305
Query: 536 NQMAFDDDIVVWKSLLASCKTHGN 559
M+ D++ W ++++S +GN
Sbjct: 306 WNMS-RRDLISWNTMISSYVQNGN 328
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 192/654 (29%), Positives = 308/654 (47%), Gaps = 110/654 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ CS + G +VH + D + N +L +YG CG L DAR +FDEM
Sbjct: 161 TFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEM 220
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLG 200
P+R+VVSW +I S NG A Y M L+S + P+ + S++ + L +
Sbjct: 221 PERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMT 280
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS-- 258
R++H + +K S + + NAL+ Y K + W VF+ K+ SW S+I+G +
Sbjct: 281 RRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACK 340
Query: 259 -----KLDFARTVFNEMESPNLASW----------------------------------- 278
L+ R + + PN +
Sbjct: 341 GRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIA 400
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELI------------------------------- 307
N++I A ++ EA ++F + R ++
Sbjct: 401 NSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC 460
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGEL 359
P+ +T ++L AC L G +IH+ ++ G S++ V N+++ H A +
Sbjct: 461 PNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNV 520
Query: 360 F---------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
F LFS M KPD ++F V+ ACA +A+L+
Sbjct: 521 FNTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALK 580
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G ++H ++ L +FV N L+D Y KCG + A LFN + DV SW+++I+GY
Sbjct: 581 QGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 640
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G E A+ +F MR V+ + V+ + VL+ACSH GLVE G Q + M + + PT
Sbjct: 641 MIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQR-LEPTE 699
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+C+VDLL RAG V EA I Q+ D +W +LL +C+ +GNV++G+RAAE++ +
Sbjct: 700 MHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFE 759
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ P + +LL NIYA +G+W+E ++ MK RG +K PG SW++I ++HA
Sbjct: 760 LKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHA 813
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 216/503 (42%), Gaps = 74/503 (14%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAV--LHNHILNMYGKCGSLEDARMVFDE 140
+ +L++ CS ++SL ++VH + + P +V + ILN Y K +F++
Sbjct: 57 HINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILN-YAKFQHPGSFCSLFNQ 115
Query: 141 MPQ--RNVVSWTAMIAGCS--QNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
Q R W +I S NG + E Y +M++ G+ D TF +++ CS
Sbjct: 116 TFQNCRTAFLWNTLIRAHSIAWNGTFDG-FETYNRMVRRGVQLDDHTFPFVLKLCSDSFD 174
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G ++H V K + + N L+ +Y + DA +F + +D+ S
Sbjct: 175 ICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVS------- 227
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRS 315
WNTII ++ + EA + + M R +I P+ ++V S
Sbjct: 228 ---------------------WNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVIS 266
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----------------------- 352
LL + +IH Y +K G S V CNA++
Sbjct: 267 LLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKN 326
Query: 353 -------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ + + F +M+ + +P+ +T + ++ + + G ++H
Sbjct: 327 EVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHG 386
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ M+ G D+F+ N L+DMY K G A +F+ ++ ++VSW+++I YA E
Sbjct: 387 FSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLE 446
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
A++ +M+ +G PN VT VL AC+ +G + G +++ M G+ + ++
Sbjct: 447 AIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHA-MGVRIGLTSDLFVSNSLI 505
Query: 520 DLLARAGRVHEAEDFINQMAFDD 542
D+ A+ G +H A + N D+
Sbjct: 506 DMYAKCGCLHSARNVFNTSRKDE 528
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
F ++ M+ + D TF V+ C+ + G ++H + K G DV+V N L+ +
Sbjct: 144 FETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLML 203
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK-LFRRMRSSGVRPNHVT 478
Y CG L AR LF+ M + DVVSW+++I + G EA F + S ++PN V+
Sbjct: 204 YGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVS 263
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
++ +L + + EE + + G+ + +VD + G V N+
Sbjct: 264 VISLLPISAALE-DEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET 322
Query: 539 AFDDDIVVWKSLLASCKTHG 558
+ + V W S++ G
Sbjct: 323 V-EKNEVSWNSIINGLACKG 341
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 282/563 (50%), Gaps = 72/563 (12%)
Query: 105 HILSSKCQPDAVLHNHI----LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
H L+ K P AV + ++ LNMY K G + DAR VFD MPQRN SW+ M+AG +
Sbjct: 34 HALACKI-PSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEK 92
Query: 161 QENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
A +L+ ML+ +F +++ A S + +G Q+H ++K + +
Sbjct: 93 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 152
Query: 220 NALIAMYTKFDRILDAWNVF-SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N+L+ MY K + A++VF SS R IT W
Sbjct: 153 NSLVTMYAKAGCMGAAFHVFESSRERNSIT-----------------------------W 183
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+ +I G A A+ A+S+FS+M P T +L A + +L G Q H ++K
Sbjct: 184 SAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVK 243
Query: 339 KGFYSNVPV----------CNAILQHQAG--------------------------ELFRL 362
GF + V C I + G E L
Sbjct: 244 LGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTL 303
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
++ M P T + ACA +A+LE G QLH I+K GL L V + L MY K
Sbjct: 304 YARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSK 363
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG+L +F + D DV++W+S+I G++Q GCG AL LF M+ G P+++T + +
Sbjct: 364 CGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINI 423
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L ACSH+GLV+ G + + +M +YG+ P + +C+VD+L+RAG + EA+DFI + D
Sbjct: 424 LCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDH 483
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+W+ +L +C++ + DVG A E ++++ +S+A +LL NIYAS KW +V R+
Sbjct: 484 GTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRH 543
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
M+ RGV K PG SW+E+ +++H
Sbjct: 544 LMRLRGVNKDPGCSWVELNSRVH 566
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 192/654 (29%), Positives = 308/654 (47%), Gaps = 110/654 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ CS + G +VH + D + N +L +YG CG L DAR +FDEM
Sbjct: 12 TFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEM 71
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLG 200
P+R+VVSW +I S NG A Y M L+S + P+ + S++ + L +
Sbjct: 72 PERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMT 131
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS-- 258
R++H + +K S + + NAL+ Y K + W VF+ K+ SW S+I+G +
Sbjct: 132 RRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACK 191
Query: 259 -----KLDFARTVFNEMESPNLASW----------------------------------- 278
L+ R + + PN +
Sbjct: 192 GRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIA 251
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELI------------------------------- 307
N++I A ++ EA ++F + R ++
Sbjct: 252 NSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC 311
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGEL 359
P+ +T ++L AC L G +IH+ ++ G S++ V N+++ H A +
Sbjct: 312 PNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNV 371
Query: 360 F---------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
F LFS M KPD ++F V+ ACA +A+L+
Sbjct: 372 FNTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALK 431
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G ++H ++ L +FV N L+D Y KCG + A LFN + DV SW+++I+GY
Sbjct: 432 QGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 491
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G E A+ +F MR V+ + V+ + VL+ACSH GLVE G Q + M + + PT
Sbjct: 492 MIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQR-LEPTE 550
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+C+VDLL RAG V EA I Q+ D +W +LL +C+ +GNV++G+RAAE++ +
Sbjct: 551 MHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFE 610
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ P + +LL NIYA +G+W+E ++ MK RG +K PG SW++I ++HA
Sbjct: 611 LKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHA 664
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 174/408 (42%), Gaps = 66/408 (16%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M++ G+ D TF +++ CS + G ++H V K + + N L+ +Y
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ DA +F + +D+ S WNTII ++ +
Sbjct: 61 LNDARRLFDEMPERDVVS----------------------------WNTIIGLLSVNGDY 92
Query: 292 NEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
EA + + M R +I P+ ++V SLL + +IH Y +K G S V CNA
Sbjct: 93 TEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNA 152
Query: 351 IL------------------------------------QHQAGELFRLFSLMLASQTKPD 374
++ + + + F +M+ + +P+
Sbjct: 153 LVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPN 212
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+T + ++ + + G ++H + M+ G D+F+ N L+DMY K G A +F+
Sbjct: 213 SVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFH 272
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
++ ++VSW+++I YA EA++ +M+ +G PN VT VL AC+ +G +
Sbjct: 273 NLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGP 332
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
G +++ M G+ + ++D+ A+ G +H A + N D+
Sbjct: 333 GKEIHA-MGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDE 379
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/555 (32%), Positives = 275/555 (49%), Gaps = 72/555 (12%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
QP V +N IL+ Y K G + +A +FD +R+ SW +++GC +N + + +++
Sbjct: 78 QPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMK 137
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M S + PD FT+ II C +G G+Q+HA ++K L+ MY +
Sbjct: 138 MRCSSVRPDNFTYAIIIPCCD----LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGE 193
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
I DA R VF+ M S L +WN +I+ +
Sbjct: 194 IGDA----------------------------RKVFDGMPSRGLVTWNAMISCYSKYGRG 225
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
++++ LF ++ + D T +L + +++ MQ+HS II++GF S+ NA+
Sbjct: 226 DKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNAL 285
Query: 352 LQ--------HQAGELFR----------------------------LFSLMLASQTKPDH 375
+ A LF LF M +P+
Sbjct: 286 VNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNS 345
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGL-ALDVFVMNGLMDMYVKCGSLGSARELFN 434
TF ++GACA + + G H ++K GL DV V + ++DMY KCG +G A F
Sbjct: 346 FTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQ 405
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM---RSSGVRPNHVTLVGVLTACSHVGL 491
M + D+ SW+ +I GYAQ G G +ALKL+ M SG+ PN VT VGVL ACSH GL
Sbjct: 406 EMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGL 465
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
++EG ++ M +++ I PT E +C+VDLL RAG + EAE I + D V+W +LL
Sbjct: 466 LKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALL 525
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRK 611
+CK HG+V + +R AE++ +P NS+ VLL N Y G+W E + M+ RGV K
Sbjct: 526 GACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEK 585
Query: 612 VPGQSWIEIQTKIHA 626
G SW+EI T +H+
Sbjct: 586 TAGCSWVEIGTCMHS 600
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 165/365 (45%), Gaps = 40/365 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TYA +++ ++ + +VH I+ D +N ++N+Y KCG + A +F+E+
Sbjct: 246 TYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEI 305
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P ++VVSWT +I G Q+G A+ L+ QM + P+ FTFG ++ AC+ GR
Sbjct: 306 PDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGR 365
Query: 202 QLHAHVIK-SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
H V+K G+ ++ +A++ MY+K + DA F + +DI S
Sbjct: 366 HFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIAS----------- 414
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM---GDRELIPDGLTVRSLL 317
WN II G A +A+ L++EM G + P+ +T +L
Sbjct: 415 -----------------WNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVL 457
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPD 374
CAC+ L +G ++ K C L +AG L +L+LA KPD
Sbjct: 458 CACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPD 517
Query: 375 HITFNDVMGACAAMASLEMG--TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
++ + ++GAC ++M T H Y + + + + L + Y G G A E+
Sbjct: 518 NVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVL---LANSYTDIGEWGEAVEI 574
Query: 433 FNFME 437
ME
Sbjct: 575 REVME 579
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LH ++K GL V+ N L+ Y+ +L A +L +FM P VVS+++++ GY +FG
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGL 96
Query: 457 GEEALKL-------------------------------FRRMRSSGVRPNHVTLVGVLTA 485
EA+KL F +MR S VRP++ T ++
Sbjct: 97 VSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTY-AIIIP 155
Query: 486 CSHVGLVEE-GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
C +G ++ + ++ + I T R + A G + +A + M +
Sbjct: 156 CCDLGFGQQVHADIVKVCSDLDAFIGTNLLR-----MYAEVGEIGDARKVFDGMP-SRGL 209
Query: 545 VVWKSLLASCKTHGNVD 561
V W ++++ +G D
Sbjct: 210 VTWNAMISCYSKYGRGD 226
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 320/644 (49%), Gaps = 75/644 (11%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQN-LYNEALVAFDFLQNNTNFRIRP 80
+ C LLD A V + ++R D+ ++ S C QN ++ EAL F +Q++ F +
Sbjct: 208 YAKCGLLDSALRVFE-WMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSD-GFSMNS 265
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH-NHILNMYGKCGSLEDARMVFD 139
T ++ C+ L L GR++H +L KC + + N +L MY +CG ++ A VF
Sbjct: 266 YTTVGVLQVCAELAQLNHGRELHAALL--KCGTEFNIQCNALLVMYARCGWVDSALRVFR 323
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E+ ++ +SW +M++ QN AI+ + +M+Q+G PD S++ A L +
Sbjct: 324 EIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLIN 383
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR++HA+ +K S L N L+ MY K +
Sbjct: 384 GREVHAYAVKQRLDSDLQIANTLMDMYIKCYSV--------------------------- 416
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ + VF+ M + SW TIIA A S +EA+ F + D + + S+L A
Sbjct: 417 -ECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEA 475
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNV-------------PVCNAI--------------- 351
C+ S+ Q+HSY I+ G + VC A+
Sbjct: 476 CSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWT 535
Query: 352 ----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
L H+A LF ML + +PD + ++GA A ++SL G ++H ++
Sbjct: 536 SMVNCFAENGLLHEA---VALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFL 592
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ ++ V++ L+DMY CGS+ A ++F+ + DVV W+++I G G++A+
Sbjct: 593 IRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAI 652
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+F+RM +GV P+HV+ + +L ACSH LV+EG +M ++Y + P +E +CVVDL
Sbjct: 653 YIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDL 712
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L R+G+ EA FI M + VVW +LL +C+ H N ++ A + +L+++P N
Sbjct: 713 LGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNY 772
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ N++A GKW V + M E+G+RK P SWIEI +H
Sbjct: 773 VLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVH 816
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/545 (27%), Positives = 228/545 (41%), Gaps = 82/545 (15%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPST--YADLISACSSLRSLQLGRKVHDHILSSKC 111
LCK EAL + R P T Y ++ + R++ GR++H H +++
Sbjct: 29 LCKDGDLREALR--QLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGA 86
Query: 112 QPD---AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
D L +L MYGKCG L DA +FD MP R V SW A+I C +G A+ +
Sbjct: 87 LGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146
Query: 169 YVQMLQS----GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
Y M S G PD T S+++AC G ++H +KS + NAL+
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVG 206
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY K + A VF W M DG ++ASWN+ I+G
Sbjct: 207 MYAKCGLLDSALRVF---------EW--MRDG----------------RDVASWNSAISG 239
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
EA+ LF M + T +L C L G ++H+ ++K G N
Sbjct: 240 CVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN 299
Query: 345 VPVCNAILQHQA------------------------------------GELFRLFSLMLA 368
+ CNA+L A E F M+
Sbjct: 300 IQ-CNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQ 358
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ PDH ++ A + L G ++H Y +K L D+ + N LMDMY+KC S+
Sbjct: 359 NGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVEC 418
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
+ +F+ M D VSW+++I YAQ EA+ FR + G++ + + + +L ACS
Sbjct: 419 SARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSG 478
Query: 489 VGLVE--EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
+ + + + Y I +I ++ ++D+ G V A + I +M DIV
Sbjct: 479 LKSISLLKQVHSYAIRNGLLDLI----LKNRIIDIYGECGEVCYALN-IFEMLDKKDIVT 533
Query: 547 WKSLL 551
W S++
Sbjct: 534 WTSMV 538
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 297/582 (51%), Gaps = 50/582 (8%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T L+ CSS++ L+L VH I+ V +L++ + G L A ++FD++
Sbjct: 41 TLHHLLDQCSSMKRLKL---VHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQI 97
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
PQ N + +I G S + ++ L+ QM+ +G MP+QFTF +++AC+
Sbjct: 98 PQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAV 157
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+HA IK G H QNA++ Y IL A VF I+ + I SW SMI G+SK+
Sbjct: 158 IVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMG 217
Query: 262 F---ARTVFNEMESPNLAS---------------------------------------WN 279
F A +F EM + + N
Sbjct: 218 FCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTN 277
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+I A C + A +F +M D++++ + S++ A + + +QI +++ K
Sbjct: 278 ALIDMYAKCGHLQFAKHVFDQMLDKDVV----SWTSMVNAYANQGLVENAVQIFNHMPVK 333
Query: 340 GFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
S N +C + + Q E LF M S PD T ++ C+ L +G Q H
Sbjct: 334 NVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAH 393
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
CYI + + V + N L+DMY KCG+L +A ++F M + +VVSW+ +I A G GE
Sbjct: 394 CYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGE 453
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA+++F+ M++SG+ P+ +T G+L+ACSH GLV+ G + IM + + I P E +C+
Sbjct: 454 EAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACM 513
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VDLL R G + EA I +M D+VVW +LL +C+ +GN+++ K+ + +L++ NS
Sbjct: 514 VDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNS 573
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
VLL N+Y+ S +W+++ ++ M + G++K S+IEI
Sbjct: 574 GLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEI 615
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 5/195 (2%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T ++S CS+ L LG++ H +I + L N +++MY KCG+L+ A +F
Sbjct: 371 ATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFG 430
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP++NVVSW +I + +G AIE++ M SGL PD+ TF ++ ACS V +G
Sbjct: 431 MPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMG 490
Query: 201 RQLHAHVIKSEHGSHLISQNA-LIAMYTKFDRILDAWNVFSSIARK-DITSWGSMIDG-- 256
R +I + S + A ++ + + + +A + + K D+ WG+++
Sbjct: 491 RYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACR 550
Query: 257 -FSKLDFARTVFNEM 270
+ L+ A+ + ++
Sbjct: 551 IYGNLEIAKQIMKQL 565
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 174/605 (28%), Positives = 288/605 (47%), Gaps = 60/605 (9%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+E C+ + +A V D R W+ L S + L F + N + P
Sbjct: 287 YESCLCVREAQAVFDLMPHRNVITWN-SLASCYVNCGFPQKGLNVFREMGLN-GVKPDPM 344
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+ ++ ACS L+ L+ G+ +H + D + ++N+Y C + +A+ VFD M
Sbjct: 345 AMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLM 404
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P RNVV+W ++ + G + ++ +M+ +G+ PD T SI+ ACS L + G+
Sbjct: 405 PHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGK 464
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H ++ + NAL+++Y K + +A VF I +++
Sbjct: 465 VIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREV-------------- 510
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
ASWN I+ + + + +FS+M E+ D +T ++ C
Sbjct: 511 --------------ASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCV 556
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
+ + M+I + GF KPD T +
Sbjct: 557 KNSRIEEAMEIFRKMQTMGF------------------------------KPDETTIYSI 586
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ AC+ L MG ++HCY+ + D+ N L+DMY KCG L +R +F+ M DV
Sbjct: 587 LRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDV 646
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
SW+++I G G+EAL LF +M S V+P+ T VL+ACSH LVEEG+Q++
Sbjct: 647 FSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNS 706
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M ++ + P E +CVVD+ +RAG + EA FI +M + + WK+ LA C+ + NV+
Sbjct: 707 MSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVE 766
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+ K +A+ + +IDP SA V L NI ++ W E +++ MKERG+ K PG SW +
Sbjct: 767 LAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVG 826
Query: 622 TKIHA 626
++H
Sbjct: 827 NRVHT 831
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/659 (22%), Positives = 275/659 (41%), Gaps = 110/659 (16%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
A+ C ++ A V D + R W+ L + + L F + N + P
Sbjct: 84 AYGKCKCVEGARRVFDDLVARDVVTWN-SLSACYVNCGFPQQGLNVFRKMGLN-KVKANP 141
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
T + ++ CS L+ L+ G+++H ++ D + + +N Y KC + +A+ VFD
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP R+VV+W ++ + G + ++ +M+ G+ PD T I+ ACS L + G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+ +H +K ++ NAL+ +Y + +A VF + +++ +
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVIT----------- 310
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
WN++ + +C + +++F EMG + PD + + S+L AC
Sbjct: 311 -----------------WNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPAC 353
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL---------- 362
+ L G IH + +K G +V VC A++ +A +F L
Sbjct: 354 SQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWN 413
Query: 363 ------------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
F M+ + KPD +T ++ AC+ + L+ G +H + ++
Sbjct: 414 SLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRH 473
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G+ DVFV N L+ +Y KC + A+ +F+ + +V SW+ ++ Y E+ L +F
Sbjct: 474 GMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMF 533
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE----------- 513
+M V+ + +T V+ C +EE ++++R MQ G P
Sbjct: 534 SQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQT-MGFKPDETTIYSILRACSL 592
Query: 514 ------------------------RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
R + +VD+ A+ G + + + + M D+ W +
Sbjct: 593 SECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPI-KDVFSWNT 651
Query: 550 LLASCKTHGNVDVGKRA----AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
++ + HGN GK A + +L + +SA + + + S EE ++ SM
Sbjct: 652 MIFANGMHGN---GKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSM 707
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 233/528 (44%), Gaps = 76/528 (14%)
Query: 78 IRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I+P + + AC++ R ++ HD D + N ++ YGKC +E AR
Sbjct: 36 IKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGAR 95
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFD++ R+VV+W ++ A G + ++ +M + + + T SI+ CS L
Sbjct: 96 RVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQ 155
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+++H V++ + +A + Y K + +A VF + +D+
Sbjct: 156 DLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVV------- 208
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+WN++ + +C + +++F EM + PD +TV
Sbjct: 209 ---------------------TWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSC 247
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL----- 362
+L AC+ L G IH + +K G NV V NA++ +A +F L
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN 307
Query: 363 -----------------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
F M + KPD + + ++ AC+ + L+ G +H
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHG 367
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+ +K G+ DVFV L+++Y C + A+ +F+ M +VV+W+SL Y G ++
Sbjct: 368 FAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQK 427
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
L +FR M +GV+P+ VT++ +L ACS + ++ G ++ +G++ + ++
Sbjct: 428 GLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAV-RHGMVEDVFVCNALL 486
Query: 520 DLLARAGRVHEAEDFINQMAFD----DDIVVWKSLLASCKTHGNVDVG 563
L A+ V EA Q+ FD ++ W +L + T+ + G
Sbjct: 487 SLYAKCVCVREA-----QVVFDLIPHREVASWNGILTAYFTNKEYEKG 529
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 192/432 (44%), Gaps = 67/432 (15%)
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
+G N AI++Y G+ PD+ F ++ +AC+ +Q H + S +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
NA I Y K + A VF + +D+ +W
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVV----------------------------TW 109
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N++ A +C + +++F +MG ++ + LTV S+L C+ L G +IH ++++
Sbjct: 110 NSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVR 169
Query: 339 KGFYSNVPVCNAILQ--------HQAGELFRL---------------------------- 362
G +V V +A + +A +F L
Sbjct: 170 HGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNV 229
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M+ KPD +T + ++ AC+ + L+ G +H + +K G+ +VFV N L+++Y
Sbjct: 230 FREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYES 289
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
C + A+ +F+ M +V++W+SL Y G ++ L +FR M +GV+P+ + + +
Sbjct: 290 CLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSI 349
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L ACS + ++ G ++ ++G++ + +V+L A V EA+ + M
Sbjct: 350 LPACSQLKDLKSGKTIHGFAV-KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP-HR 407
Query: 543 DIVVWKSLLASC 554
++V W S L+SC
Sbjct: 408 NVVTWNS-LSSC 418
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E ++++ A KPD F V ACAA Q H + G+ DV + N +
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
Y KC + AR +F+ + DVV+W+SL Y G ++ L +FR+M + V+ N +
Sbjct: 83 HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T+ +L CS + ++ G +++ + +G++ S V+ A+ V EA+ +
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVV-RHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 538 MAFDDDIVVWKSLLASCKTH-----GNVDVGKRAAENILKIDPTNSAALVLLCN 586
M D+V W S L+SC + ++V + + +K DP + ++ C+
Sbjct: 202 MP-HRDVVTWNS-LSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/647 (30%), Positives = 322/647 (49%), Gaps = 72/647 (11%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
F C +++A + + R W+ + S+ + L+ E+ F +++ + I +
Sbjct: 205 FGGCGDINEACSIFNEMNERDTISWN-SIISANAQNTLHEESFRYFHWMRL-VHEEINYT 262
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + L+S C S+ L+ G+ VH + + + L N +L++Y G +DA ++F M
Sbjct: 263 TLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRM 322
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+++SW +M+A Q+G+ A++++ +ML + TF S + AC G+
Sbjct: 323 PERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGK 382
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH V+ LI N LI Y K ++ +A
Sbjct: 383 ILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEA-------------------------- 416
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG---LTVRSLLC 318
+ VF M + +WN +I G A+ + NEA++ F M RE G +T+ ++L
Sbjct: 417 --KKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLM--REGSTSGVDYITIVNILG 472
Query: 319 ACTSPLSLYQ-GMQIHSYIIKKGF-------------------------------YSNVP 346
+C + L + G+ IH++ + GF +
Sbjct: 473 SCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSS 532
Query: 347 VCNAILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
V NAI+ A E +L M ++ + D F+ + A +A LE G QLH
Sbjct: 533 VWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGST 592
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K G LD F++N MDMY KCG L A + D +SW++LI A+ G +A
Sbjct: 593 IKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAK 652
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+ F M GV+PNHV+ V +L+ACSH GLV+EGL Y M + YGI P E C++DL
Sbjct: 653 ETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDL 712
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L R+GR+ EAE FI +M + +VW+SLLASC+ + N+D+G++AA+++L++DP++ +A
Sbjct: 713 LGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAY 772
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
VL N++A+ G+WE+V + G M ++K P SW++ + I G
Sbjct: 773 VLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFG 819
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 155/674 (22%), Positives = 277/674 (41%), Gaps = 124/674 (18%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--AD 85
++ A V D R + W+ + S + Y EA++ F ++ I+PS + A
Sbjct: 8 INYAQLVFDRMSERNEASWN-HMMSGYVRVGSYVEAVL---FFRDICGIGIKPSGFMIAS 63
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQ--PDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
L++AC+ S+ H + KC D + ++ Y G + +A+ +F+EMP
Sbjct: 64 LVTACNK-SSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPD 122
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
RNVVSWT+++ S NG + I Y +M G+ ++ +I +C L + LG QL
Sbjct: 123 RNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQL 182
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI--------- 254
H +K + + + N+LI M+ I +A ++F+ + +D SW S+I
Sbjct: 183 LGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLH 242
Query: 255 -DGFSKLDFARTVFNEMESPNLA------------SW--------------------NTI 281
+ F + R V E+ L+ W NT+
Sbjct: 243 EESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTL 302
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIP----------DG--------------------- 310
++ + + +A +F M +R+LI DG
Sbjct: 303 LSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINY 362
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFSL 365
+T S L AC P G +H +++ G + + N ++ H+ E ++F
Sbjct: 363 VTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQR 422
Query: 366 ML--------------------------------ASQTKPDHITFNDVMGACAAMASL-E 392
M S + D+IT +++G+C L +
Sbjct: 423 MPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIK 482
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
G +H + + TG LD V + L+ MY KCG L S+ +F+ + W+++I A
Sbjct: 483 YGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANA 542
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
++G GEEALKL RMRS+G+ + L+ + + ++EEG QL+ + G
Sbjct: 543 RYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHG-STIKLGFELDH 601
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ +D+ + G + +A + Q D + W +L++ HG K ++LK
Sbjct: 602 FIINAAMDMYGKCGELDDALRILPQPT-DRSRLSWNTLISISARHGQFHKAKETFHDMLK 660
Query: 573 --IDPTNSAALVLL 584
+ P + + + LL
Sbjct: 661 LGVKPNHVSFVCLL 674
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/549 (21%), Positives = 224/549 (40%), Gaps = 118/549 (21%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY K G + A++VFD M +RN SW M++G + G A+ + + G+ P F
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 184 FGSIIRACSGLCCVGL-GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
S++ AC+ + G Q H IK + + + Y + + +A +F+ +
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEME------------------------------- 271
+++ SW S++ +S + V N +
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 272 -----------SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP------------ 308
+++ N++I C + NEA S+F+EM +R+ I
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240
Query: 309 -------------------DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
+ T+ LL C S L G +H +K G SN+ +CN
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300
Query: 350 AIL-------QHQAGEL-----------------------------FRLFSLMLASQTKP 373
+L + + EL ++F+ ML + +
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+++TF + AC G LH +++ GL ++ + N L+ Y KC + A+++F
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVF 420
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR---SSGVRPNHVTLVGVLTAC-SHV 489
M D V+W++LI G+A EA+ F+ MR +SGV +++T+V +L +C +H
Sbjct: 421 QRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTHE 478
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
L++ G+ ++ G + +S ++ + A+ G +H + +Q+ F VW +
Sbjct: 479 DLIKYGIPIHA-HTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTS-SVWNA 536
Query: 550 LLASCKTHG 558
++A+ +G
Sbjct: 537 IIAANARYG 545
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 276/562 (49%), Gaps = 98/562 (17%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MYGKCGS+E+AR VFD + R+ VSWT+MI+ + NG + A++LY QM G+ PD T
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F S + AC+ L G+ +HA ++ S S + +ALI MY +
Sbjct: 61 FTSALLACTKL---ADGKAIHARIVSSNMESDFVG-SALINMYARCG------------- 103
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
D++S AR F ++++ ++ W +++ + EA+ L+ M
Sbjct: 104 --DVSS-------------ARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYGRMDH 148
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-------------------- 343
+ DG+T + L AC S +L +G IH + + GF S
Sbjct: 149 EGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGELDAA 208
Query: 344 ---------NVPVCNAIL-----------------------------------QHQAG-E 358
NV V NA++ QH G E
Sbjct: 209 RAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGRE 268
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLM 417
L+ M + PD +T + ACA SL++G ++H ++K + V L+
Sbjct: 269 ALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALV 328
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
+MY +CG L +AR +F M DV+SW+++ YAQ G ++ L L+ M G+RPN +
Sbjct: 329 NMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEI 388
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T +L CSH GL+ G++ + MQ+E+ ++P RE C+VDLL R+GR+ +AE +
Sbjct: 389 TFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVES 448
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M + D V W ++L SCKTH + D KRAA + ++DP N++ LL +I+ ++G +E
Sbjct: 449 MPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEA 508
Query: 598 ARLMGSMKERGVRKVPGQSWIE 619
+ SMKE G++K PGQS IE
Sbjct: 509 LEVQLSMKEMGLKKPPGQSLIE 530
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 171/371 (46%), Gaps = 66/371 (17%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHI--- 106
L ++ + Y EAL + + ++ TY + AC+SL +L+ G+ +H +
Sbjct: 126 LMTAYVQTGHYREALDLYGRM-DHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSEC 184
Query: 107 -------------LSSKC-------------QPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ +KC + + N ++ MY KCGSLE A+ F+
Sbjct: 185 GFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEA 244
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
++++VSW AMI +Q+G A++LY M G++PD+ T S + AC+ + LG
Sbjct: 245 SGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLG 304
Query: 201 RQLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
R++H+ V+K++ S L+ Q AL+ MY + R+ A ++F + ++D+ SW +M +
Sbjct: 305 REIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVY-- 362
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A +A++ + L+ EM + P+ +T S+L
Sbjct: 363 --------------------------AQQGHADQVLDLYLEMVLHGIRPNEITFTSILVG 396
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPD 374
C+ L +G + ++ + + VP+ C L ++G L +L+ + +PD
Sbjct: 397 CSHAGLLARG--VECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPD 454
Query: 375 HITFNDVMGAC 385
+ + V+G+C
Sbjct: 455 SVAWLTVLGSC 465
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 136/270 (50%), Gaps = 39/270 (14%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHIL 122
A D Q T+ + P T A +SAC+ SLQLGR++H +L ++ Q ++ ++
Sbjct: 269 ALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALV 328
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
NMYG+CG LE AR +F++M QR+V+SWTAM + +Q G + ++LY++M+ G+ P++
Sbjct: 329 NMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEI 388
Query: 183 TFGSIIRACS--GLCCVGLGRQLHAHVIKSEHGSHLISQNAL--IAMYTKFDRILDAWNV 238
TF SI+ CS GL G+ L ++SEH I ++ L + + + R+ DA +
Sbjct: 389 TFTSILVGCSHAGLLARGVECFLE---MQSEHEVVPIREHFLCMVDLLGRSGRLRDAEAL 445
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
S+ + P+ +W T++ + S+A+ A
Sbjct: 446 VESMPYQ---------------------------PDSVAWLTVLGSCKTHSDADTAKRAA 478
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ +EL P+ ++ SLL + + L Q
Sbjct: 479 RRV--KELDPENTSLYSLLSSIFTAAGLPQ 506
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 292/580 (50%), Gaps = 62/580 (10%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-SLE 132
T +P YA L+ C+ S G + H H + S D + N +L +Y K G +L
Sbjct: 54 TRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLF 113
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+AR VFD + ++++SWT+MI G + + ++EL+++ML G+ P+ FT ++I+ACS
Sbjct: 114 EARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACS 173
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
GL + LG+ H V+ + + ALI MY +
Sbjct: 174 GLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRN----------------------- 210
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGL 311
S +D A VF E+ P+ W +II+ ++A+ F M + L PDG
Sbjct: 211 -----SAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGF 265
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGELFRLF 363
T ++L AC + L QG ++H+ +I G NV V +++ L +Q+ +F
Sbjct: 266 TFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRM 325
Query: 364 SLM-LASQT-----------------------KPDHITFNDVMGACAAMASLEMGTQLHC 399
S+ L S T K D +F V+ ACA +A++ G ++HC
Sbjct: 326 SVKNLVSWTALLGGYCQNGDFESVIRIFREGKKVDTYSFGTVLRACAGLAAVRQGKEVHC 385
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+K DV + L+D+Y KCG + A +F M ++++W+S+I G+AQ G G E
Sbjct: 386 QYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGE 445
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
+LF M G+RP++++ VGVL ACSH GLV++G + + M Y I P E +C++
Sbjct: 446 VFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMI 505
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DLL RAG + EAE+ I D+ +W LL +C + +R A+ +++ P +
Sbjct: 506 DLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHL 565
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+ V L N+Y + G+W++ ++ M +RGV K+PG SWIE
Sbjct: 566 SYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWIE 605
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/604 (29%), Positives = 295/604 (48%), Gaps = 68/604 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHIL-SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+I C +L+SL + +H +L S + N +L +Y + G+ + A VFDE+ Q
Sbjct: 8 IIHNCKTLKSL---KSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N WT++I G +N Q + A L++QM + + FT S+++A + L G+ ++
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLD 261
V+K LI QN+++ ++ + ++ A F + KDI SW MI G+ ++D
Sbjct: 125 GFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVD 184
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL--CA 319
AR F+ M N+ SW ++I G + EA LF M ++L + V +
Sbjct: 185 IARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGD 244
Query: 320 CTSPLSLYQGMQIH---SYII-------------KKGFYSNVPVCNAI------------ 351
C + ++ M IH S+ I K F+ +P N I
Sbjct: 245 CVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKN 304
Query: 352 -----------------------------LQHQAGELFRLFSLMLASQTKPDHITFNDVM 382
Q + LF KPD ++
Sbjct: 305 GDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGII 364
Query: 383 GACAAMASLEMGTQL-HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
AC+ + ++ + H Y+ + L+ D+ V L+DMY KCGS+ A ++F D+
Sbjct: 365 SACSQLGIIDAAESIIHNYVGPSLLS-DLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDL 423
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+ +S++I A G G +A+ LF +M+ + ++P+ VT +GVLTAC+H GLV+EG + ++
Sbjct: 424 LCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQ 483
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M E+GI P+ + +CVVDLL R G + EA + I M VVW +LLA+C+ H NV
Sbjct: 484 MTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQ 543
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+ + AA + KI+P NS +LL NIYA++G+W VA++ ++E VRK G SWIE+
Sbjct: 544 LAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELS 603
Query: 622 TKIH 625
+H
Sbjct: 604 HVVH 607
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 282/563 (50%), Gaps = 72/563 (12%)
Query: 105 HILSSKCQPDAVLHNHI----LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
H L+ K P AV + ++ LNMY K G + DAR VFD MPQRN SW+ M+AG +
Sbjct: 140 HALACKI-PSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEK 198
Query: 161 QENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
A +L+ ML+ +F +++ A S + +G Q+H ++K + +
Sbjct: 199 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 258
Query: 220 NALIAMYTKFDRILDAWNVF-SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N+L+ MY K + A++VF SS R IT W
Sbjct: 259 NSLVTMYAKAGCMGAAFHVFESSRERNSIT-----------------------------W 289
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+ +I G A A+ A+S+FS+M P T +L A + +L G Q H ++K
Sbjct: 290 SAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVK 349
Query: 339 KGFYSNVPV----------CNAILQHQAG--------------------------ELFRL 362
GF + V C I + G E L
Sbjct: 350 LGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTL 409
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
++ M P T + ACA +A+LE G QLH I+K GL L V + L MY K
Sbjct: 410 YARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSK 469
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG+L +F + D DV++W+S+I G++Q GCG AL LF M+ G P+++T + +
Sbjct: 470 CGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINI 529
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L ACSH+GLV+ G + + +M +YG+ P + +C+VD+L+RAG + EA+DFI + D
Sbjct: 530 LCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDH 589
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+W+ +L +C++ + DVG A E ++++ +S+A +LL NIYAS KW +V R+
Sbjct: 590 GTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRH 649
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
M+ RGV K PG SW+E+ +++H
Sbjct: 650 LMRLRGVNKDPGCSWVELNSRVH 672
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 186/382 (48%), Gaps = 24/382 (6%)
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL--DAWNVFSSI--ARKDITSWG 251
C G LHA +KS SH N+LI Y+ R L A+ VF I A +D+TSW
Sbjct: 27 CPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWN 86
Query: 252 SMID---GFSKLDFARTVFNEMESPN--LASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
S+++ G LD A + F M S + L S ++ A + + A A + +
Sbjct: 87 SLLNPLSGHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACK 145
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHS--------YIIKKGFYSNVPVCNAILQHQAGE 358
IP + S + CTS L++Y + I S + F + V + + E
Sbjct: 146 IPSAV---SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEE 202
Query: 359 LFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
F LF LML ++ V+ A + L MG Q+H I+K GL V V N L+
Sbjct: 203 AFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLV 262
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY K G +G+A +F + + ++WS++I GYAQ G + A+ +F +M ++G P
Sbjct: 263 TMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEF 322
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VGVL A S +G + G Q + +M + G +S +VD+ A+ G + +A++ +Q
Sbjct: 323 TFVGVLNASSDLGALAVGKQAHGLMV-KLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQ 381
Query: 538 MAFDDDIVVWKSLLASCKTHGN 559
+ ++ DIV+W ++++ +G
Sbjct: 382 L-YEVDIVLWTAMVSGHVQNGE 402
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 290/530 (54%), Gaps = 30/530 (5%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
Q + V N +++ Y K G + DAR VFD MP+RNVVSWT+M+ G Q G A +L+ +
Sbjct: 80 QRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWE 139
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + ++ G +++ + ++L + + + ++ +I Y + R
Sbjct: 140 MPRRNVVSWTVMIGGLLKESR----IDDAKKLFDMIPEKD----VVVVTNMIGGYCQVGR 191
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASC 288
+ +A +F + +++ +W +M+ G++K +D AR +F M N SW ++ G
Sbjct: 192 LDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQS 251
Query: 289 SNANEAMSLFSEMGDRELIP--DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
EA LF M + ++ + + L +++GM+ +
Sbjct: 252 GRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMK----------ERDEG 301
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFN-----DVMGACAAMASLEMGTQLHCYI 401
NA+++ + L +L L ++ + + + N V+ CA++ASL+ G Q+H +
Sbjct: 302 TWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARL 361
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+++ D++V + L+ MYVKCG L A+ +FN DVV W+S+I GY+Q G GEEAL
Sbjct: 362 VRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEAL 421
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+F M SSGV+P+ VT +GVL+ACS+ G V+EG +++ M+ Y + P E +C+VDL
Sbjct: 422 NVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDL 481
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAGRV EA + + +M + D +VW +LL +C+ H +D+ + A E + K++P N+
Sbjct: 482 LGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPY 541
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGND 630
VLL ++YA+ G+W +V L + R V K PG SWIE++ K+H +G D
Sbjct: 542 VLLSHMYATKGRWRDVEVLRKKINRR-VIKFPGCSWIEVEKKVHMFTGGD 590
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 2/178 (1%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C E F L + +A + + R + W+ + ++ L EAL F +Q
Sbjct: 272 CNEMILQFGLAGEMHRARMMFEGMKERDEGTWN-AMIKVFERKGLDLEALGLFARMQREG 330
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
PS + ++S C+SL SL GR+VH ++ S+ D + + ++ MY KCG L A
Sbjct: 331 VALNFPSMIS-VLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRA 389
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+ +F+ ++VV W +MI G SQ+G A+ ++ M SG+ PD+ TF ++ ACS
Sbjct: 390 KGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACS 447
>gi|242037439|ref|XP_002466114.1| hypothetical protein SORBIDRAFT_01g001585 [Sorghum bicolor]
gi|241919968|gb|EER93112.1| hypothetical protein SORBIDRAFT_01g001585 [Sorghum bicolor]
Length = 627
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 309/602 (51%), Gaps = 56/602 (9%)
Query: 64 LVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
+VA Q P+++A ++A +++ +++LG H+ VL L+
Sbjct: 1 MVALHAKQPTLRLLPAPTSHARPLAAAAAVANVRLGAPPPPHV---------VLDCKRLD 51
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
K G L DA +FD MP++NVV+WT I+ C++NG A ++ ML+SG+ + F
Sbjct: 52 GLMKSGRLGDALDLFDRMPRKNVVAWTTAISECTRNGWLEATAAMFADMLESGVAANDFA 111
Query: 184 FGSIIRACSGLCCVGL--GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
+ + AC+ L Q+H+ +++ + + LI +Y++ + A V S
Sbjct: 112 CNAALAACAAASAHALSLDEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVMGS 171
Query: 242 IARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
+ + + ++ID +S+ D A TVF ++S N+ SW +++ +A+ +F
Sbjct: 172 ---QSVYASTALIDFYSRHGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVF 228
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------ 352
SEM + P+ L AC + G QIH +IK +++ V NA+L
Sbjct: 229 SEMISEAVEPNEFAFSIALGACGF---VCLGRQIHCSVIKCNLMTDIRVSNALLSMYGRS 285
Query: 353 ---------------------------QHQAGELFRLFSLMLASQTK---PDHITFNDVM 382
Q G + +L+L ++ P+ F+ +
Sbjct: 286 GFVSEIDAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGL 345
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
+CA +A L+ G QLHC +K G V N L++MY KCG +GSAR F+ M DV+
Sbjct: 346 SSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVM 405
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
SW+SLI G AQ G L+ F M SSG +P+ T + VL C+H GLV+EG +R+M
Sbjct: 406 SWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLM 465
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ YG+ PT +C++D+L R GR EA I M F+ D+++WK+LLASCK H N+D+
Sbjct: 466 TDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIENMPFEPDVLIWKTLLASCKLHKNLDI 525
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
GK A + ++++ +SA+ VL+ N+YA +W++ R+ M E GV+K G SWIE++
Sbjct: 526 GKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKN 585
Query: 623 KI 624
++
Sbjct: 586 EV 587
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
QN ++E VA ++ F ++ +S+C+ L L GR++H L C
Sbjct: 315 QNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVC 374
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
N ++NMY KCG + AR+ FD M +V+SW ++I G +Q+G N +E + +M SG
Sbjct: 375 TGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSG 434
Query: 177 LMPDQFTFGSIIRACS 192
PD TF +++ C+
Sbjct: 435 WQPDDSTFIAVLVGCN 450
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 187/616 (30%), Positives = 308/616 (50%), Gaps = 66/616 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ ++ + L E+L F ++ + I +T + +++ C S+ +L+ GR +H +L
Sbjct: 203 MIAAYIRNGLCKESLRCFSWMFR-VHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKF 261
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ N ++ MY G EDA +VF M +++++SW +M+A +Q+G A++L
Sbjct: 262 GWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLL 321
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M + TF S + ACS G+ LHA VI ++I NAL+ +Y K
Sbjct: 322 ATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKS 381
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+++A VF ++ ++D + WN +I G A
Sbjct: 382 GLMIEAKKVFQTMPKRDGVT----------------------------WNALIGGHADSE 413
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ-GMQIHSYIIKKGFYSNVPVC 348
+EA+ F M + + + +T+ ++L AC +P L + GM IH++II GF S+ V
Sbjct: 414 EPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQ 473
Query: 349 NAILQHQAG------------------------------------ELFRLFSLMLASQTK 372
N+++ A E + M +
Sbjct: 474 NSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVN 533
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
D +F++ + A A +A LE G QLH +K G + FV + MDMY KCG + +
Sbjct: 534 VDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRI 593
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
+ +SW+ L +++ G E+A + F M + GV+P+HVT V +L+ACSH G+V
Sbjct: 594 IPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMV 653
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
EEGL Y M E+GI C++DLL R+GR EAE FI +M VW+SLLA
Sbjct: 654 EEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLA 713
Query: 553 SCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV 612
+CKTHGN+++G++A EN+LK+DP++ +A VL NI A++GKWE+V ++ M ++K
Sbjct: 714 ACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKK 773
Query: 613 PGQSWIEIQTKIHASG 628
P SW++++ K+ G
Sbjct: 774 PACSWVKLKNKLSLFG 789
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 218/488 (44%), Gaps = 71/488 (14%)
Query: 52 SSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQL-GRKVHDHILS 108
S + Y E++ F+ +++ F ++PS A L++AC + + G +VH I+
Sbjct: 2 SGFVRAGSYRESMRFFNEMRD---FGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVK 58
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
D + ++++YG G DA VF EM +NVVSWTA++ G+ + + +
Sbjct: 59 VGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNI 118
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
Y +M G+ + T S+I C L LG Q+ HVIK +++ N+LI+M+
Sbjct: 119 YRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGY 178
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
F + +A VFS + D SW SMI + + +
Sbjct: 179 FGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCK------------------------ 214
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
E++ FS M + T+ ++L C S +L G IHS ++K G+ SNV
Sbjct: 215 ----ESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCAS 270
Query: 349 NAILQ--HQAG----------------------------------ELFRLFSLMLASQTK 372
N ++ AG + +L + M +
Sbjct: 271 NTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRG 330
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
+++TF + AC+ G LH ++ GL +V V N L+ +Y K G + A+++
Sbjct: 331 ANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKV 390
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC-SHVGL 491
F M D V+W++LI G+A +EALK F+ MR GV N++T+ VL AC + L
Sbjct: 391 FQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDL 450
Query: 492 VEEGLQLY 499
+E G+ ++
Sbjct: 451 LEHGMPIH 458
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 149/596 (25%), Positives = 256/596 (42%), Gaps = 100/596 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T + +IS C SL + LG +V H++ + + + N +++M+G GS+E+A VF
Sbjct: 132 NTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSG 191
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M + + +SW +MIA +NG ++ + M + + T +++ C + + G
Sbjct: 192 MDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWG 251
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R +H+ V+K S++ + N LI MY+ R DA VF + KD+ SW SM
Sbjct: 252 RGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSM------- 304
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+A A N +A+ L + M + +T S L AC
Sbjct: 305 ---------------------MACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAAC 343
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
+ P +G +H+ +I G + NV V NA++
Sbjct: 344 SDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWN 403
Query: 353 --------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS-LEMGTQLHCYIMK 403
+ E + F LM ++IT ++V+GAC A LE G +H +I+
Sbjct: 404 ALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIIL 463
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
TG D +V N L+ MY KCG L S+ +F+ + + +W++++ A G EEALK
Sbjct: 464 TGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKF 523
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI---------------MQNEYG- 507
MR +GV + + L A + + ++EEG QL+ + + YG
Sbjct: 524 LLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGK 583
Query: 508 ---------IIPTRERRS-----CVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSL 550
IIP RS + +R G +A++ ++M D V + SL
Sbjct: 584 CGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSL 643
Query: 551 LASCKTHGNVDVGKRAAENILKI--DPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
L++C G V+ G ++++K P V + ++ SG++ E + M
Sbjct: 644 LSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEM 699
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 147/315 (46%), Gaps = 39/315 (12%)
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT-SPLSLYQGMQIHSYIIKKG 340
++G + E+M F+EM D + P G+ V SL+ AC S L +G+Q+H +I+K G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 341 FYSNVPVCNAILQ-----HQAGELFRLFSLMLASQT--------------KPDHI----- 376
S+V V +++ A + ++F M+ +P +
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120
Query: 377 ------------TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
T + V+ C ++ + +G Q+ +++K GL +V V N L+ M+ G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
S+ A +F+ M++ D +SW+S+I Y + G +E+L+ F M N TL +L
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
C V ++ G ++ ++ ++G + ++ + + AGR +AE + Q + D+
Sbjct: 241 GCGSVDNLKWGRGIHSLVL-KFGWNSNVCASNTLITMYSDAGRCEDAE-LVFQGMVEKDM 298
Query: 545 VVWKSLLASCKTHGN 559
+ W S++A GN
Sbjct: 299 ISWNSMMACYAQDGN 313
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 309/589 (52%), Gaps = 51/589 (8%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHIL 107
L S CK E L F + ++ +PS Y ++ ACS+L L G+ +H + +
Sbjct: 105 LVSGYCKNGCEVEGLRQFSQMWSDGQ---KPSQYTLGSVLRACSTLSLLHTGKMIHCYAI 161
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR-NVVSWTAMIAGCSQNGQENAAI 166
+ + + + +++MY KC L +A +F +P R N V WTAM+ G +QNG+ AI
Sbjct: 162 KIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAI 221
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ + +M G+ + FTF SI+ AC+ + GRQ+H +I S G ++ Q+AL+ MY
Sbjct: 222 QCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMY 281
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
K D+ S AR + + ME ++ WN++I G
Sbjct: 282 AKCG---------------DLAS-------------ARMILDTMEIDDVVCWNSMIVGCV 313
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+ EA+ LF +M +R++ D T S+L + S +L G +HS IK GF +
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKT 373
Query: 347 VCNAILQHQAGE-----LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
V NA++ A + +F+ +L D I++ ++ E QL C +
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKIL----DKDVISWTSLVTGYVHNGFHEKALQLFCDM 429
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPD---VVSWSSLIVGYAQFGCG 457
+ LD FV+ + + + R++ NF++ + + +SLI YA+ GC
Sbjct: 430 RTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL 489
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E+A+++F M + V ++ ++ + GLVE G + M+ YGI P + +C
Sbjct: 490 EDAIRVFDSMETRNV----ISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYAC 545
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++DLL RAG+++EAE +N+M + D +WKSLL++C+ HGN+++G+RA +N++K++P+N
Sbjct: 546 MIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSN 605
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
S VLL N+++ +G+WE+ A + +MK G+ K PG SWIE+++++H
Sbjct: 606 SLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHT 654
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 171/336 (50%), Gaps = 15/336 (4%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLY-NEALVAFDFLQNNTNFRI 78
D + C L A ++D+ DD+ ++ C + Y EALV F + N + RI
Sbjct: 279 DMYAKCGDLASARMILDTM--EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNR-DIRI 335
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
TY ++ + +S ++L++G VH + + + N +++MY K G+L A VF
Sbjct: 336 DDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVF 395
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+++ ++V+SWT+++ G NG A++L+ M + + DQF + AC+ L +
Sbjct: 396 NKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIE 455
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GRQ+HA+ IKS GS L ++N+LI MY K + DA VF S+ +++ SW ++I G++
Sbjct: 456 FGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYA 515
Query: 259 K---LDFARTVFNEME-----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+ ++ ++ F ME P + +I + NEA L + M ++ PD
Sbjct: 516 QNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRM---DVEPDA 572
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+SLL AC +L G + +IK +++P
Sbjct: 573 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLP 608
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 192/626 (30%), Positives = 307/626 (49%), Gaps = 90/626 (14%)
Query: 48 FDLFSSLCKQNL--YNEALVAFDFLQNNTNFRIRPS---------TYADLISACSSLRSL 96
F +F +L ++ +N L F+ +N +F +R + TY +S C
Sbjct: 128 FSVFQNLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEF 187
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
G ++H L + D + N ++ MY + L DAR VFDEMP R+ VSW+AMI G
Sbjct: 188 LFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGY 247
Query: 157 SQNGQEN-AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+Q G AI ++VQM++ G+ D + C + LG+Q+H +K+ H +H
Sbjct: 248 AQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETH 307
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
N LI+ Y+K + I DA + VF + N+
Sbjct: 308 TSVGNVLISTYSKCEIIEDA----------------------------KAVFELINDRNV 339
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SW T+I+ A+SLF++M + P+ +T LL A T + QG+ +H
Sbjct: 340 ISWTTMISLYEEG-----AVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGL 394
Query: 336 IIKKGFYSNVPVCNAILQ---------------------------------------HQA 356
IK F S + V N+++ +A
Sbjct: 395 CIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEA 454
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMA--SLEMGTQLHCYIMKTGLALDVFVMN 414
E F L+++M + KP+ TF V+ A +A SL+ G + H +++K GL +D +
Sbjct: 455 LEAF-LYAIM---EYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISG 510
Query: 415 GLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRP 474
L+DMY K GS+ ++ +FN +W++LI GYAQ G E +KLF M ++P
Sbjct: 511 ALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKP 570
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
+ V + VLTACS +V+ G Q + +M ++ I P E SC+VD+L RAGR+ EAE+
Sbjct: 571 DAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEI 630
Query: 535 INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKW 594
+ ++ + +SLL +C+THGNV++ +R A +++K +P S VL+ N+YA G W
Sbjct: 631 LARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGPYVLMSNLYAQKGDW 690
Query: 595 EEVARLMGSMKERGVRKVPGQSWIEI 620
E+VA++ M+ERGV K G SW+++
Sbjct: 691 EKVAKVRKEMRERGVMKEIGFSWVDV 716
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 133/555 (23%), Positives = 227/555 (40%), Gaps = 118/555 (21%)
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL--MPDQFTFGSI 187
S + +FD+ P N S+ ++ ++ + + GL D+FT
Sbjct: 22 SFQHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLA 81
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
++AC G LGRQ+H VI S SH+ N+L+ MY K ++ A++VF ++ DI
Sbjct: 82 LKACCGFP--KLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDI 139
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
SW +++ GF K + A+S M +
Sbjct: 140 VSWNTILSGFEK-------------------------------SENALSFALRMNLNGVK 168
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------QH------- 354
D +T + L C G Q+H+ +K GF +V V NA++ +H
Sbjct: 169 FDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKV 228
Query: 355 --------------------QAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
Q G + +F M+ K D++ + C +
Sbjct: 229 FDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERN 288
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
LE+G Q+HC +KTG V N L+ Y KC + A+ +F + D +V+SW+++I
Sbjct: 289 LELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISL 348
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL------------ 498
Y E A+ LF +MR GV PN VT +G+L A + +VE+GL +
Sbjct: 349 YE-----EGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSE 403
Query: 499 -------------YRIMQNEYGI---IPTRERRS--CVVDLLARAGRVHEA-EDFINQ-M 538
+ MQ+ + +P RE S ++ A+ EA E F+ M
Sbjct: 404 LTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIM 463
Query: 539 AFDDDIVVWKSLLASCKTHGNVDV--GKRAAENILK----IDPTNSAALVLLCNIYASSG 592
+ + + S+L + ++ + G+R +++K +DP S AL+ ++YA G
Sbjct: 464 EYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALL---DMYAKRG 520
Query: 593 KWEEVARLMGSMKER 607
+E R+ ++
Sbjct: 521 SIQESQRVFNETSKQ 535
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI--PDGLTVR 314
F +F++ PN AS+N ++ A +++ F L D T+
Sbjct: 20 FRSFQHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLV 79
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--QAGELFRLFSL------- 365
L AC L G QIH ++I GF S++ V N+++ ++G+L R FS+
Sbjct: 80 LALKACCGFPKL--GRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDP 137
Query: 366 ------------------------MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
M + K D +T+ + C G QLH
Sbjct: 138 DIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLA 197
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG-CGEEA 460
+K G DVFV N L+ MY + L AR++F+ M D VSWS++I GYAQ G G +A
Sbjct: 198 LKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQA 257
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+ +F +M GV+ ++V + G L+ C H +E G Q++
Sbjct: 258 ILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIH 296
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 271/490 (55%), Gaps = 39/490 (7%)
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
S + D F ++++C L + G+Q+H+ +I S N L+ Y+K +
Sbjct: 56 SEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKS 115
Query: 235 AWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ +FS++ R+++ S+ +I+G+ L+ A+ +F+EM N+A+WN +IAG+
Sbjct: 116 SLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFN 175
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF---------- 341
+A+SLF EM +PD T+ S+L C SL G ++H+ ++K GF
Sbjct: 176 KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSL 235
Query: 342 ----------------YSNVPVCNAIL-------QHQAG---ELFRLFSLMLASQTKPDH 375
++P+ + + Q G E+ +++M + +PD
Sbjct: 236 AHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDK 295
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
ITF V+ AC+ +A+L G Q+H ++K G + + V++ L+ MY + G L + + F
Sbjct: 296 ITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVD 355
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
E+ DVV WSS+I Y G GEEAL+LF +M + N VT + +L ACSH GL E+G
Sbjct: 356 RENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKG 415
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ + +M +Y + P E +CVVDLL RAGR+ EAE I M D ++WK+LLA+CK
Sbjct: 416 TEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACK 475
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
H ++ +R +E I+K+DP ++A+ VLL NI+AS+ W V+++ +M++R VRK PG
Sbjct: 476 LHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGI 535
Query: 616 SWIEIQTKIH 625
SW+E++ +H
Sbjct: 536 SWLELKNLVH 545
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 192/443 (43%), Gaps = 43/443 (9%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L+ A ++ D R W+ + + L + +AL F + F T ++
Sbjct: 144 LESAQKLFDEMSERNIATWN-AMIAGLTQFEFNKQALSLFKEMYG-LGFLPDEFTLGSVL 201
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
C+ LRSL G++VH +L + +V+ + + +MY K GSL D + MP R VV
Sbjct: 202 RGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVV 261
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W +IAG +QNG + Y M +G PD+ TF S++ ACS L +G G+Q+HA V
Sbjct: 262 AWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEV 321
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
IK+ S L ++LI+MY++ + D+ F D+ W SM
Sbjct: 322 IKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSM-------------- 367
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
IA EA+ LF +M D ++ + +T SLL AC+
Sbjct: 368 --------------IAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKE 413
Query: 328 QGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVM 382
+G + ++KK Y P C L +AG L ++ + +PD I + ++
Sbjct: 414 KGTEYFDLMVKK--YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL 471
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV- 441
AC EM ++ I+K LD L +++ + + ++ M D V
Sbjct: 472 AACKLHKEAEMAERISEEIIKLD-PLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVR 530
Query: 442 ----VSWSSLIVGYAQFGCGEEA 460
+SW L QF G+++
Sbjct: 531 KEPGISWLELKNLVHQFSMGDKS 553
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 286/538 (53%), Gaps = 12/538 (2%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L G+ +H ++++ D VLHN++++ Y KCG + AR VFD MP RN VS +++G
Sbjct: 27 LSKGKALHARLITA-AHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+ +G+ +++L ++++ G+ +++ + + A + + +GRQ H + +K+
Sbjct: 86 YASSGRHKESLQL-LRVVDFGM--NEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQ 142
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF-------SKLDFARTVFN 268
NA++ MY + + DA VF S++ D ++ SMI+G+ L R +
Sbjct: 143 RYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTG 202
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
E E + S+ ++ AS ++ + ++ + L + +L+ ++
Sbjct: 203 EAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHD 262
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAA 387
+ + +K S V A Q++ E +LF M +P+ T+ + +CA
Sbjct: 263 ANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAG 322
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+A+L G L +MKTG + V N LM+MY K GS+ A +F M DVVSW+ +
Sbjct: 323 LAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLI 382
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I GYA G E ++ F M S+ V P++VT VGVL+AC+ +GLV+E M E G
Sbjct: 383 ITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVG 442
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
I P +E +C+V LL R GR+ EAE FI D+V W+SLL SC+ + N +G R A
Sbjct: 443 ITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVA 502
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
E IL+++P++ VLL N+YA + +W+ V ++ M+ER VRK PG SWI + + +H
Sbjct: 503 EQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVH 560
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 123/212 (58%), Gaps = 4/212 (1%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+Y ++ C+S++ LG +VH L + + + + + +++MYGKC + DA F+ +
Sbjct: 211 SYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVL 270
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P++NVVSWTA++ +QN A++L++ M G+ P++FT+ + +C+GL + G
Sbjct: 271 PEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGN 330
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
L A V+K+ H HL+ NAL+ MY+K I DA VF S+ +D+ SW +I G++
Sbjct: 331 ALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHG 390
Query: 262 FAR---TVFNEMESPN-LASWNTIIAGVASCS 289
AR F+ M S + S+ T + +++C+
Sbjct: 391 LAREGMEAFHSMLSAAVIPSYVTFVGVLSACA 422
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
+ ++ + LY +AL F ++ ++P+ TYA +++C+ L +L+ G + ++
Sbjct: 281 VMTAYTQNELYEDALQLFLDMEMEG---VQPNEFTYAVALNSCAGLAALRTGNALGACVM 337
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ ++ N ++NMY K GS+EDA VF MP R+VVSW +I G + +G +E
Sbjct: 338 KTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGME 397
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
+ ML + ++P TF ++ AC+ L V
Sbjct: 398 AFHSMLSAAVIPSYVTFVGVLSACAQLGLV 427
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 298/583 (51%), Gaps = 93/583 (15%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+I ACSSL S L R VH H L + + N ++ MYGK G +EDAR +FD M R+
Sbjct: 138 VIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRS 197
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS------------------- 186
+VSW M++G + N A ++ +M GL P+ T+ S
Sbjct: 198 IVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFK 257
Query: 187 ----------------IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
++ C+ + V G+++H +V+K + +L +NALI Y K
Sbjct: 258 VMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQ 317
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ DA VF E+++ NL SWN +I+ A
Sbjct: 318 HMGDA----------------------------HKVFLEIKNKNLVSWNALISSYAESGL 349
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS--LYQGMQIHSYIIKKGFYSNVPVC 348
+EA + F M ++ D VR + + ++ +S Y+G +G
Sbjct: 350 CDEAYAAFLHM-EKSDSDDHSLVRPNVISWSAVISGFAYKG---------RG-------- 391
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
++ ELFR L ++ + +T + V+ CA +A+L +G +LH Y ++ ++
Sbjct: 392 -----EKSLELFRQMQL---AKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSD 443
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++ V NGL++MY+KCG +F+ +E D++SW+SLI GY G GE AL+ F M
Sbjct: 444 NILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMI 503
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
+ ++P+++T V +L+ACSH GLV G L+ M E+ I P E +C+VDLL RAG +
Sbjct: 504 RARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLL 563
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA D + M + + VW +LL SC+ + ++D+ + A IL + + + +LL NIY
Sbjct: 564 KEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIY 623
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH--ASGN 629
A++G+W++ AR+ S + +G++K+PGQSWIE++ K++ ++GN
Sbjct: 624 AANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGN 666
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 235/521 (45%), Gaps = 76/521 (14%)
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR---NVVSWTA 151
+LQ R++H ++ + L ++ +Y + L AR VFD +P +++ W +
Sbjct: 43 TLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNS 102
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
+I +G A+ELYV+M + G +PD FT +IRACS L L R +H H ++
Sbjct: 103 IIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMG 162
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS----KLDFARTVF 267
+HL N L+ MY K R+ DA +F + + I SW +M+ G++ L +R VF
Sbjct: 163 FRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASR-VF 221
Query: 268 NEME----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
ME PN +W ++++ A C +E + LF M R + + +L C
Sbjct: 222 KRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADM 281
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+ G +IH Y++K G+ + V NA++ T H D
Sbjct: 282 AEVDWGKEIHGYVVKGGYEDYLFVKNALI-----------------GTYGKHQHMGD--- 321
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED----- 438
A LE+ + ++ N L+ Y + G A F ME
Sbjct: 322 --AHKVFLEIKNK------------NLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDD 367
Query: 439 -----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
P+V+SWS++I G+A G GE++L+LFR+M+ + V N VT+ VL+ C+ + +
Sbjct: 368 HSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALN 427
Query: 494 EGLQLY----RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD----DIV 545
G +L+ R M ++ ++ + ++++ + G E + FD+ D++
Sbjct: 428 LGRELHGYAIRNMMSDNILVG-----NGLINMYMKCGDFKEG-----HLVFDNIEGRDLI 477
Query: 546 VWKSLLASCKTHGNVDVGKRAAENIL--KIDPTNSAALVLL 584
W SL+ HG + R ++ ++ P N + +L
Sbjct: 478 SWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAIL 518
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L SS + LY+E L F ++ I A ++S C+ + + G+++H +++
Sbjct: 239 LLSSHARCGLYDETLELFKVMRTR-GIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKG 297
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW-------------------- 149
+ + N ++ YGK + DA VF E+ +N+VSW
Sbjct: 298 GYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAF 357
Query: 150 ---------------------TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
+A+I+G + G+ ++EL+ QM + +M + T S++
Sbjct: 358 LHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVL 417
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
C+ L + LGR+LH + I++ +++ N LI MY K + VF +I +D+
Sbjct: 418 SVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLI 477
Query: 249 SWGSMIDGFSKLDF---ARTVFNEMESPNLASWN-TIIAGVASCSNAN---EAMSLFSEM 301
SW S+I G+ A FNEM + N T +A +++CS+A +LF +M
Sbjct: 478 SWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQM 537
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 119/227 (52%), Gaps = 7/227 (3%)
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD T V+ AC+++ S + +HC+ ++ G + V+N L+ MY K G + AR+L
Sbjct: 130 PDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQL 189
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ M +VSW++++ GYA A ++F+RM G++PN VT +L++ + GL
Sbjct: 190 FDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLY 249
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV---HEAEDFINQMAFDDDIVVWKS 549
+E L+L+++M+ GI E + V+ + A V E ++ + ++D + V +
Sbjct: 250 DETLELFKVMRTR-GIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNA 308
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
L+ + H ++ A + L+I N + L + YA SG +E
Sbjct: 309 LIGTYGKHQHMG---DAHKVFLEIKNKNLVSWNALISSYAESGLCDE 352
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 186/648 (28%), Positives = 328/648 (50%), Gaps = 65/648 (10%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTN------FRIRPS----TYADLISACSSLRSLQL 98
+LF + ++NL + + +L N F I P ++ +I+ + ++
Sbjct: 27 NLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRRDLFSWTLMITCYTRNGEVEK 86
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
R++ D L + N +++ Y K G + +A+ +FDEMP +N++SW +M+AG +Q
Sbjct: 87 ARELFDS-LPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQ 145
Query: 159 NGQENAAIELYVQM---------------LQSGLMPDQFTFGSIIRACSGLCCVGL--GR 201
N + +E + +M +Q G + + F + + + V + G
Sbjct: 146 NRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGF 205
Query: 202 QLHAHVIKSEH------GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ ++++S +++S NA+I+ Y + I +A +F + +D SW +MI+
Sbjct: 206 ARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMIN 265
Query: 256 GF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI----- 307
G+ KLD AR + NEM N+ + +I+G C+ +EA F E+G +++
Sbjct: 266 GYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAM 325
Query: 308 ----------------------PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-N 344
D +T +++ + + ++I + ++ S N
Sbjct: 326 IAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWN 385
Query: 345 VPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ +L Q + + F+LM KPD ++F + +CA +A+L++G QLH ++K
Sbjct: 386 SLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKG 445
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + V N L+ MY KCG + A +FN + DV+SW+SLI GYA G G+EALKLF
Sbjct: 446 GYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLF 505
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M S G+ P+ VT +G+L+AC+H G+V+ GL+L++ M Y I P E +C+VDLL R
Sbjct: 506 EEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGR 565
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
GR+ EA + + M VW +LL +C+ HGN+++G+ AA + + +P ++ VLL
Sbjct: 566 VGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLL 625
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGNDIS 632
NI+A + +W EV + M K PG SW+E++ ++H +D S
Sbjct: 626 SNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSDDS 673
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 224/497 (45%), Gaps = 51/497 (10%)
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
+ + V +N ++++Y K G + AR +FD+MP+RN+VSW M++G NG+ + A +L+V
Sbjct: 2 AEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFV 61
Query: 171 QMLQSGLMPDQFTF------GSIIRA--------CS---GLCC--------VGLGRQLHA 205
M + L G + +A CS G+ C V GR A
Sbjct: 62 IMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEA 121
Query: 206 HVIKSEHG-SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLD 261
+ E +LIS N+++A YT+ ++ F+ + +D+ SW M+DGF LD
Sbjct: 122 KRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLD 181
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL--CA 319
A F E + PN+ SW T+++G A N E+ LF +M R ++ + + + C
Sbjct: 182 SAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCE 241
Query: 320 CTSPLSLYQGM----------QIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLAS 369
L++ M I+ Y+ + N + G + S +
Sbjct: 242 IDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQC 301
Query: 370 QTKPDHITFNDVMGACAAMA--SLEMGTQLHCYI------MKTGLALDVFVMNGLMDMYV 421
+ F D +G + ++ G H I K + D+ N ++ Y
Sbjct: 302 NKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYA 361
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
+ G + A ++F M + D+VSW+SLI G+ G +ALK F M G +P+ ++
Sbjct: 362 QVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFAC 421
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
L++C+ + ++ G QL++++ + G + + ++ + A+ GR+ EA N +
Sbjct: 422 GLSSCATIAALQVGNQLHQVVV-KGGYLNYLVVNNALITMYAKCGRILEAGLVFNGIC-H 479
Query: 542 DDIVVWKSLLASCKTHG 558
D++ W SL+ +G
Sbjct: 480 ADVISWNSLIGGYAING 496
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 283/545 (51%), Gaps = 67/545 (12%)
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
L+N ++NMY +CGS DA +FDEM + +VVSWT I G + + E A EL+ +L
Sbjct: 256 LNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERI-GAAYDAIE--AFELFRLVLSGN 312
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+ +++ +++ A + GRQ+ K+ + NALI MY K
Sbjct: 313 MEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGK-------- 364
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
G M+ AR +F+EM + SWN++IAG A +A+
Sbjct: 365 -------------CGEMVA-------ARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALK 404
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--------------- 341
+FS+M D L P+ T+ S+L + Q MQIHSYI+K GF
Sbjct: 405 VFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYG 464
Query: 342 -----------YSNVPVCN--------AILQHQA--GELFRLFSLMLASQTKPDHITFND 380
YS++ N A L H + +LF + D IT +
Sbjct: 465 KCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSI 524
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V+ AC A+ LE G +H +K+G++ D FV + ++D+Y KCG++ A + F + +
Sbjct: 525 VLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNN 584
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+V+W+++++GYAQ GC E +LF +M G++P+ +T +GVL +C H GLV E
Sbjct: 585 LVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLS 644
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
M +G++P E +C++DL R G + +A+ I+QM D +W+ LL+ C HGNV
Sbjct: 645 SMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNV 704
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
D+G+ AA+ ++++ P N +A VLL N+YAS+G+W V +L MK++ + K PG SWI++
Sbjct: 705 DLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQV 764
Query: 621 QTKIH 625
+ +H
Sbjct: 765 RGSVH 769
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 211/475 (44%), Gaps = 49/475 (10%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
Y + A +SL L + + L S DA L + I+N + G AR + P
Sbjct: 23 YPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTP 82
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL-------- 194
+ VSW ++I+G ++ Q +L+ + +SGL PD+F+ S+++ C L
Sbjct: 83 YPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHG 142
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
C+ +G L+ V+ + L+ Y K + A F D W +M+
Sbjct: 143 VCLKMGL-LNGFVV-----------SGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMV 190
Query: 255 DGF---SKLDFARTVFNEMESPNLA---SWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
GF + + R VF EM L + ++ + + + S+ E +F
Sbjct: 191 CGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVF---------- 240
Query: 309 DGLTVR-SLLCACT-----SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAG 357
GL+V+ LLC C+ + +++Y S IK P + + + A
Sbjct: 241 -GLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAI 299
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E F LF L+L+ + + +V+ A L+ G Q+ K G L V N L+
Sbjct: 300 EAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALI 359
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY KCG + +AR +F+ M D VSW+SLI GYA+ G ++ALK+F +MR ++PN
Sbjct: 360 FMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKY 419
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
TL +L ++ E+ +Q++ + + G I SC++ + + E++
Sbjct: 420 TLASILEVAANSNFPEQAMQIHSYIV-KLGFIVDDSMLSCLITAYGKCNMICESK 473
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + ++ AC +L L+ GR +H L S D + + ++++Y KCG++++A F +
Sbjct: 521 TLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNV 580
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ N+V+W AM+ G +Q+G + EL+ +ML+ G+ PD+ T+ ++ +C C GL
Sbjct: 581 SKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSC---CHAGLVN 637
Query: 202 QLHAHV 207
+ H ++
Sbjct: 638 EAHTYL 643
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 124/265 (46%), Gaps = 13/265 (4%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVH 103
W+ L + + L +AL F +++ + ++P+ Y A ++ ++ + ++H
Sbjct: 386 WN-SLIAGYAENGLMKQALKVFSQMRD---YLLQPNKYTLASILEVAANSNFPEQAMQIH 441
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
+I+ D + + ++ YGKC + +++ V+ ++ Q NV+ AM A G
Sbjct: 442 SYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHA 501
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A++L+ + D T +++AC L + GR +H+ +KS ++A+I
Sbjct: 502 DALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVI 561
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV---FNEMESPNLASWNT 280
+Y K + +A F ++++ ++ +W +M+ G+++ V FN+M +
Sbjct: 562 DVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEI 621
Query: 281 IIAGVA-SCSNA---NEAMSLFSEM 301
GV SC +A NEA + S M
Sbjct: 622 TYLGVLNSCCHAGLVNEAHTYLSSM 646
>gi|297745358|emb|CBI40438.3| unnamed protein product [Vitis vinifera]
Length = 1079
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 284/550 (51%), Gaps = 35/550 (6%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S++A ISA L L G+++H H++ L N +L++Y KC D +FDE
Sbjct: 76 SSHALKISA--KLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDE 133
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIEL----YVQMLQSGLMPDQFTFGSIIRACSGLCC 196
MP +NVVSW +I G + + A + L + QM+ + P+ T ++RA L
Sbjct: 134 MPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELND 193
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
VG+ RQLH ++KS S+ +AL+ Y KF +
Sbjct: 194 VGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLV------------------------ 229
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
D A++ F+E+ S +L WN +++ A +A +F M + D T S+
Sbjct: 230 ----DEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSM 285
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHI 376
+ +C S G Q+H II+ F +V V +A L E RL M+ T PD +
Sbjct: 286 INSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASA-LHGDGKEAMRLLQEMIRVYTYPDEL 344
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
++ +C +++ Q+H Y+++ G + + N L+ Y KCGS+GSA + F+ +
Sbjct: 345 ALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSV 404
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+PD++SW+SL+ YA G +E +++F +M S VRP+ V +GVL+AC+H G V EGL
Sbjct: 405 AEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGL 464
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ +M N Y I+P E +C++DLL RAG + EA + + M + + L +CK
Sbjct: 465 HYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKV 524
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
H NV + + A+E + ++P A L+ N+YAS G W +VAR+ M+ER KVPG S
Sbjct: 525 HRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCS 584
Query: 617 WIEIQTKIHA 626
W+EI ++H
Sbjct: 585 WMEIAGEVHT 594
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 312/582 (53%), Gaps = 48/582 (8%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQ- 112
L Q EAL D L R+ + DL+ C+ + + G+ VH H+ + +
Sbjct: 37 LSSQGRLPEALSYLDRLAQR-GVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKR 95
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
P ++ NH++ MY +CG +AR VFD+M RN+ SW M+AG ++ G N A +L+ +M
Sbjct: 96 PTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRM 155
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
++ D ++ +I+ A + C L+ + + G + S ++ + K +
Sbjct: 156 MEK----DVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKEL 211
Query: 233 LDAWNVFSSIARKDITS----WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGV 285
A V + S S++D ++K + ART+F+EM ++ +W TI++G
Sbjct: 212 QLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGY 271
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A + N A LF +M ++ +P+S S +I G+ N
Sbjct: 272 AKWGDMNSASELFHQMPEK-----------------NPVSW-------SALIS-GYARNS 306
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
L H+A F+ M+ P+ TF+ + ACA++A+L+ G Q+H Y+++T
Sbjct: 307 ------LGHEA---LDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTY 357
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLF 464
+ V++ L+DMY KCG L ++ +F+ M + DVV W+++I AQ G GE+A+++F
Sbjct: 358 FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMF 417
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M SG++P+ +T + +L+ACSH GLV+EGL+ ++ M ++G+ P +E SC++DLL R
Sbjct: 418 NDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGR 477
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG E + + M+ D VW +LL C+ H N+++G++ AE ++++ P +SAA V L
Sbjct: 478 AGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSL 537
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++YA GKWE V ++ M E+ +RK G SWI++ K H+
Sbjct: 538 ASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHS 579
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 314/602 (52%), Gaps = 81/602 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ + AC + + +LG +H ++ + + + N +++MYGKC ++ AR VFDE+
Sbjct: 128 TFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDEL 187
Query: 142 PQRNV---VSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACS----G 193
R + V+W ++++ S N A+ L+ +M + G++PD +I+ C G
Sbjct: 188 CYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLG 247
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
LC GRQ+H ++S + NAL+ MY K ++ DA VF + KD+ +W +M
Sbjct: 248 LC----GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAM 303
Query: 254 IDGFS---KLDFARTVFNEMESPNLAS----WNTIIAGVASCSNANEAMSLFSEMGDREL 306
+ G+S + + A ++F +M + S W+++I+G A EAM +F +M
Sbjct: 304 VTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRC 363
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK---KGFYSN----VPVCNAIL------- 352
P+ +T+ SLL AC S +L G + H Y +K KG +++ + V NA++
Sbjct: 364 RPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCK 423
Query: 353 ------------------------------QH-QAGELFRLFSLMLASQT--KPDHITFN 379
QH A +LFS M P+ T +
Sbjct: 424 SLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTIS 483
Query: 380 DVMGACAAMASLEMGTQLHCYIMK-TGLALDV-FVMNGLMDMYVKCGSLGSARELFNFME 437
V+ ACA +A+L+ G Q+H Y+++ + + DV FV N L+DMY K G + +A+ +F+ M
Sbjct: 484 CVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS 543
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ VSW+SL+ GY G E+A ++F MR + + +T + VL ACSH G+
Sbjct: 544 KRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM------ 597
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
++G+ P E +C+VDLL RAGR+ EA IN M + VVW +LL++C+ H
Sbjct: 598 -------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIH 650
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
N ++ + AA+ +L++ N LL NIYA++ +W++VAR+ MK G++K+PG SW
Sbjct: 651 SNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSW 710
Query: 618 IE 619
++
Sbjct: 711 VK 712
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 141/591 (23%), Positives = 241/591 (40%), Gaps = 141/591 (23%)
Query: 90 CSSLRSLQLGRK---VHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE--MPQR 144
C +L +L + ++ H+L+S +++ +I S+ +A ++ ++ P
Sbjct: 34 CKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYI-----SSNSITNAILLLEKNVTPSH 88
Query: 145 NVVSW-TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ V W +I N A+ L+ +M PD +TF + +AC + LG +
Sbjct: 89 SSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASI 148
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H VI+ S++ NA+I+MY K ++ A VF + + I
Sbjct: 149 HGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGIC--------------- 193
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG-DRELIPDGLTVRSLLCACTS 322
+ +WN+I++ + C N A+SLF EM ++PD + V ++L C
Sbjct: 194 ----------DSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGY 243
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR------------- 361
G Q+H + ++ G +V V NA++ A ++F
Sbjct: 244 LGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAM 303
Query: 362 ---------------LFSLMLASQTKPDHITFNDVMG-------ACAAM----------- 388
LF M + + D +T++ V+ C AM
Sbjct: 304 VTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRC 363
Query: 389 -----------------ASLEMGTQLHCYIMKTGL-------ALDVFVMNGLMDMYVKCG 424
+L G + HCY +K L D+ V+N L+DMY KC
Sbjct: 364 RPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCK 423
Query: 425 SLGSARELFNFM--EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS--SGVRPNHVTLV 480
SL AR +F+ + +D DVV+W+ +I GYAQ G AL+LF M + + PN T+
Sbjct: 424 SLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTIS 483
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER--------RSCVVDLLARAGRVHEAE 532
VL AC+ + ++ G Q+ + + R R +C++D+ +++G V A+
Sbjct: 484 CVLMACARLAALKFGKQI-------HAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQ 536
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
+ M+ + V W SLL HG R+ + D ALVL
Sbjct: 537 VVFDSMS-KRNAVSWTSLLTGYGMHG------RSEDAFRVFDEMRKEALVL 580
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 268/507 (52%), Gaps = 68/507 (13%)
Query: 158 QNGQENAAIELY-VQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-GS 214
+ Q + LY + ++Q G L+PD + +++ C+ L V GR +HAH++ S +
Sbjct: 62 RKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDN 121
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
HL+ QN ++ MY K LD AR +F+EM + +
Sbjct: 122 HLVLQNIIVNMYAKC----------------------------GCLDDARRMFDEMPTKD 153
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
+ +W +IAG + + +A+ LF +M P+ T+ SLL A S L G Q+H+
Sbjct: 154 MVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHA 213
Query: 335 YIIKKGFYSNVPVCNAILQHQA---------------------------------GELFR 361
+ +K G+ S+V V +A++ A GE
Sbjct: 214 FCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEH 273
Query: 362 LFSLMLASQTK---PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
L+ Q K P H T++ V+ ACA++ +LE G +H +++K+GL L F+ N L+D
Sbjct: 274 ALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLD 333
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY K GS+ A+ +F+ + PDVVSW++++ G AQ G G+E L F +M G+ PN ++
Sbjct: 334 MYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEIS 393
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ VLTACSH GL++EGL + +M+ +Y + P VDLL R G + AE FI +M
Sbjct: 394 FLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM 452
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
+ VW +LL +C+ H N+++G AAE ++DP +S +LL NIYAS+G+W +VA
Sbjct: 453 PIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVA 512
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ MKE GV+K P SW+EI+ +H
Sbjct: 513 KVRKMMKESGVKKQPACSWVEIENAVH 539
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 312/582 (53%), Gaps = 48/582 (8%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQ- 112
L Q EAL D L R+ + DL+ C+ + + G+ VH H+ + +
Sbjct: 37 LSSQGRLPEALSYLDRLAQR-GIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKR 95
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM 172
P ++ NH++ MY +CG +AR VFD+M RN+ SW M+AG ++ G N A +L+ +M
Sbjct: 96 PTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRM 155
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
++ D ++ +I+ A + C L+ + + G + S ++ + K +
Sbjct: 156 MEK----DVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKEL 211
Query: 233 LDAWNVFSSIARKDITS----WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGV 285
A V + S S++D +SK + ART+F+EM ++ +W TI++G
Sbjct: 212 QLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGY 271
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A + N A LF +M ++ +P+S S +I G+ N
Sbjct: 272 AKWGDMNSASELFHQMPEK-----------------NPVSW-------SALIS-GYARNS 306
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
L H+A F+ M+ P+ TF+ + ACA++A+L+ G Q+H Y+++T
Sbjct: 307 ------LGHEA---LDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTY 357
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLF 464
+ V++ L+DMY KCG L ++ +F+ M + DVV W+++I AQ G GE+A+++F
Sbjct: 358 FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMF 417
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M SG++P+ +T + +L+ACSH GLV+EGL+ ++ M ++G+ P +E +C++DLL R
Sbjct: 418 NDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGR 477
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG E + + M+ D VW +LL C+ H N+++G++ AE ++++ P +SAA V L
Sbjct: 478 AGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSL 537
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++YA GKWE V ++ M E+ +RK G SWI++ K H+
Sbjct: 538 ASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHS 579
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 270/503 (53%), Gaps = 39/503 (7%)
Query: 129 GSLEDARMVFDE-MPQRNVVSWTAMIAGCSQNGQENAAIELYVQ--MLQSGLMPDQFTFG 185
G+L + ++F+ + N+ ++ A++ SQ+ + I + +L + PD++TF
Sbjct: 72 GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
S+++AC+GL V G+++H V K S+L +N+L+ +Y K A +F + +
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191
Query: 246 DITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
D+ SW ++I G+ +D AR VF+ M NL SW+T+I+G A N EA LF M
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMP 251
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL 362
R ++ + G+ N +AI ELFR
Sbjct: 252 MRNVVSWNAMI-------------------------AGYAQNEKYADAI------ELFR- 279
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
+ P+ +T V+ ACA + +L++G +H +I + + + +F+ N L DMY K
Sbjct: 280 -QMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAK 338
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG + A+ +F+ M + DV+SWS +I+G A +G EA F M G+ PN ++ +G+
Sbjct: 339 CGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGL 398
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
LTAC+H GLV++GL+ + +M YGI P E CVVDLL+RAGR+ +AE IN M
Sbjct: 399 LTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQP 458
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+++VW +LL C+ + + + G+R IL++D +S +LV L N+YAS G+ ++ A
Sbjct: 459 NVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRL 518
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
M++ K PG SWIEI ++
Sbjct: 519 RMRDNKSMKTPGCSWIEINNSVY 541
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 36/283 (12%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMP 179
+++ Y + G+LE+AR +F+ MP RNVVSW AMIAG +QN + AIEL+ QM + GL P
Sbjct: 230 MISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAP 289
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+ T S++ AC+ L + LG+ +H + +++ L NAL MY K +L+A VF
Sbjct: 290 NDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVF 349
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
+ +D+ SW + II G+A ANEA + F+
Sbjct: 350 HEMHERDVISW----------------------------SIIIMGLAMYGYANEAFNFFA 381
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQH 354
EM + L P+ ++ LL ACT + +G++ + + Y P C L
Sbjct: 382 EMIEDGLEPNDISFMGLLTACTHAGLVDKGLEY--FDMMPQVYGITPKIEHYGCVVDLLS 439
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
+AG L + SL+ + +P+ I + ++G C E G ++
Sbjct: 440 RAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERV 482
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 60 YNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
Y +A+ F +Q+ T ++SAC+ L +L LG+ +H I +K + L N
Sbjct: 271 YADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGN 330
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+ +MY KCG + +A+ VF EM +R+V+SW+ +I G + G N A + +M++ GL P
Sbjct: 331 ALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEP 390
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+ +F ++ AC+ V G + FD + + +
Sbjct: 391 NDISFMGLLTACTHAGLVDKGLEY-------------------------FDMMPQVYGIT 425
Query: 240 SSIARKDITSWGSMIDGFS---KLDFARTVFNEME-SPNLASWNTIIAG 284
I +G ++D S +LD A ++ N M PN+ W ++ G
Sbjct: 426 PKIEH-----YGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 469
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 170/571 (29%), Positives = 284/571 (49%), Gaps = 68/571 (11%)
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+++SACS L ++ LG+ H + + + N +L Y CG L + +F +MP R
Sbjct: 463 NILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR 522
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N +SW +I+GC NG A+ L +M Q + D T SII C + G LH
Sbjct: 523 NAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLH 582
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ IK+ + NALI+MY I + +
Sbjct: 583 GYAIKTGFACDVSLVNALISMYFNCGDI----------------------------NAGK 614
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+F M ++ SWN +I G NE M+ F +M P+ +T+ +LL +C +
Sbjct: 615 FLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRT-- 672
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVC-------------------------------NAILQ 353
L QG IH++ ++ G P+ NAI+
Sbjct: 673 -LLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMS 731
Query: 354 -----HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
A E F +L ++ +PD+ITF ++ AC ++SL + + Y+++ G
Sbjct: 732 VYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDK 791
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ + N L+D++ +CG++ A+++F + D VSWS++I GY G E AL L +MR
Sbjct: 792 HIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMR 851
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
SG++P+ +T VL+ACSH G +++G ++ M E G+ E +C+VDLL R G++
Sbjct: 852 LSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQL 910
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
+EA DF+ ++ + + +SLL +C HGNV +G++ + + ++DP NS + V+L NIY
Sbjct: 911 NEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIY 970
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
A++G+W + R+ M+ER +RK+PG S +E
Sbjct: 971 AAAGRWMDANRVRSDMEERQLRKIPGFSLVE 1001
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 246/524 (46%), Gaps = 71/524 (13%)
Query: 67 FDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
F+ L+ ++P ST+A +I C+ ++ L +G+ +H ++ S D L +++M
Sbjct: 241 FEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISM 300
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y G+L AR +FD ++NVV W +MI+ +QN + + A +++ QML++ + P+ TF
Sbjct: 301 YAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTF 360
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
SII C G+ LHAHV+K S L AL++MY K + A +F + R
Sbjct: 361 VSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPR 420
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+++ SW SMI G+ W +M F +M
Sbjct: 421 RNLLSWNSMISGYGHNGL---------------WEA-------------SMDAFCDMQFE 452
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL--- 359
PD +++ ++L AC+ ++ G H++ +K F SN+ + NA+L + G+L
Sbjct: 453 GFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSS 512
Query: 360 FRLFS-------------------------------LMLASQTKPDHITFNDVMGACAAM 388
F+LF M + + D +T ++ C
Sbjct: 513 FKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVA 572
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+L G LH Y +KTG A DV ++N L+ MY CG + + + LF M +VSW++LI
Sbjct: 573 ENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALI 632
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
GY E + F +M G +PN+VTL+ +L +C + L + + + + G+
Sbjct: 633 TGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTL-LQGKSIHAFAV---RTGV 688
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
I + ++ + AR ++ + F+ +M +DI +W ++++
Sbjct: 689 IVETPIITSLISMYARFENIN-SFIFLFEMGGKEDIALWNAIMS 731
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/559 (21%), Positives = 245/559 (43%), Gaps = 79/559 (14%)
Query: 71 QNNTNFRIRPSTYADLISACSSLRSLQ-LGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
N++N ++ +++ L C ++ +L+ LG + I+ + + V+ I++ + G
Sbjct: 50 HNSSNPKV--TSFLRLFDLCRNIENLKPLGSVL---IVRDLMRDEYVVAEFIISCF-HLG 103
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
+ E A F+ + + +V MI +G + +Y++ G D FTF +I+
Sbjct: 104 APELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIK 163
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
AC+ L V + +H V+++ +L+ Q AL+ Y K R++ A
Sbjct: 164 ACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKA-------------- 209
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
R V +++ P+L +WN +I+G + E + ++ + L P+
Sbjct: 210 --------------RLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPN 255
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-------------------------- 343
T S++ CT L G IH +++K GF S
Sbjct: 256 VSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFD 315
Query: 344 -----NVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
NV + N+++ ++ E F++F ML + +P+ +TF ++ C A+
Sbjct: 316 SAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWY 375
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G LH ++MK L + V L+ MY K G L SA +F M +++SW+S+I GY
Sbjct: 376 GKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGH 435
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI-MQNEYGIIPTR 512
G E ++ F M+ G P+ +++V +L+ACS + + G + + E+
Sbjct: 436 NGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFD--SNL 493
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGKRAAE 568
+ ++ + G++ + +M + I W +L++ C +G+ V + + +
Sbjct: 494 NISNALLAFYSDCGKLSSSFKLFQKMPLRNAI-SWNTLISGCVHNGDTKKAVALLHKMQQ 552
Query: 569 NILKIDPTNSAALVLLCNI 587
+++D +++ +C +
Sbjct: 553 EKMELDLVTLISIIPICRV 571
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 145/321 (45%), Gaps = 30/321 (9%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
+ Y L++ S R+L G+ +H + + + + +++MY + ++ +F
Sbjct: 656 QKPNYVTLLNLLPSCRTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLF 715
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+ + ++ W A+++ Q ++ + ++L + + PD TF S+I AC L +
Sbjct: 716 EMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLN 775
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
L + A+VI+ H++ NALI ++ + I A +F ++ KD SW +MI+G+
Sbjct: 776 LSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGY- 834
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
G+ S A A++L S+M + PDG+T S+L
Sbjct: 835 -------------------------GLHGDSEA--ALALLSQMRLSGMKPDGITYASVLS 867
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHI 376
AC+ + QG I + ++++G + C L + G+L + + KP
Sbjct: 868 ACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVS 927
Query: 377 TFNDVMGACAAMASLEMGTQL 397
++GAC ++++G ++
Sbjct: 928 LLESLLGACIIHGNVKLGEKI 948
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 77 RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
R+ P T+ LISAC L SL L V +++ V+ N +++++ +CG++ A
Sbjct: 753 RVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIA 812
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+ +F+ + ++ VSW+ MI G +G AA+ L QM SG+ PD T+ S++ ACS
Sbjct: 813 KKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACS 870
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 301/621 (48%), Gaps = 98/621 (15%)
Query: 38 FLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQ 97
+L ++ +D DLF+ L + ++ P ++S C+ S
Sbjct: 44 YLYQYYQTFDSDLFAHLLRNGSFSN-----------------PYFINKVVSFCAKFASYD 86
Query: 98 LGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCS 157
LG ++H I+ + + + +++MY KC ++ A VF+EMP+RN V+W ++I G
Sbjct: 87 LGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPERNDVTWNSLIFG-- 144
Query: 158 QNGQENAAIELYVQMLQSGLMP--DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
Y+ ++ + M F+ + + CS L G Q+H +K ++
Sbjct: 145 -----------YLNVMPTCAMRGVTSFSVSTCLVVCSQLEVRNFGAQVHGLSLKLGFDNN 193
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ ALI MY+K D + D+W VF + K N+
Sbjct: 194 VFVGTALIDMYSKCDGVDDSWRVFDYMVDK----------------------------NV 225
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
+W ++ A +EAM L EM + + +T SLL + + P + Q+H
Sbjct: 226 VTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCS 285
Query: 336 IIKKGFYSNVPVC--------------------------------NAILQHQAG-----E 358
II+ G N+ + NA++ + +
Sbjct: 286 IIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGED 345
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
+ F M + K D TF ++GA A ++E G ++H I+KTG A V+V NGL+
Sbjct: 346 ALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVS 405
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY +CG++ ++ +F MED DVVSW++L+ G A G G EA++LF +MR + ++PN T
Sbjct: 406 MYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTT 465
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR-ERRSCVVDLLARAGRVHEAEDFINQ 537
+ VL+ACSHVG V++GL+ + M+++ + P R E + VVD+ RAG + EAE IN
Sbjct: 466 FLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINC 525
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M D V+K+LL++C HGN ++ R+A +L++ P + A +LL N+ A+ G W++
Sbjct: 526 MPMDPGPSVYKALLSACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLATEGYWDDA 585
Query: 598 ARLMGSMKERGVRKVPGQSWI 618
A + M +RGVRK PG SWI
Sbjct: 586 ADVRKLMCDRGVRKNPGYSWI 606
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 282/563 (50%), Gaps = 72/563 (12%)
Query: 105 HILSSKCQPDAVLHNHI----LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
H L+ K P AV + ++ LNMY K G + DAR +FD MPQRN SW+ M+AG +
Sbjct: 140 HALACKI-PSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEK 198
Query: 161 QENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
A +L+ ML+ +F +++ A S + +G Q+H ++K + +
Sbjct: 199 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 258
Query: 220 NALIAMYTKFDRILDAWNVF-SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N+L+ MY K + A++VF SS R IT W
Sbjct: 259 NSLVTMYAKAGCMGAAFHVFESSRERNSIT-----------------------------W 289
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+ +I G A A+ A+S+FS+M P T +L A + +L G Q H ++K
Sbjct: 290 SAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVK 349
Query: 339 KGFYSNVPV----------CNAILQHQAG--------------------------ELFRL 362
GF + V C I + G E L
Sbjct: 350 LGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTL 409
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
++ M P T + ACA +A+LE G QLH I+K GL L V + L MY K
Sbjct: 410 YARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSK 469
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG+L +F + D DV++W+S+I G++Q GCG AL LF M+ G P+++T + +
Sbjct: 470 CGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINI 529
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L ACSH+GLV+ G + + +M +YG+ P + +C+VD+L+RAG + EA+DFI + D
Sbjct: 530 LCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDH 589
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
+W+ +L +C++ + DVG A E ++++ +S+A +LL NIYAS KW +V R+
Sbjct: 590 GTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERVRH 649
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
M+ RGV K PG SW+E+ +++H
Sbjct: 650 LMRLRGVNKDPGCSWVELNSRVH 672
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 186/382 (48%), Gaps = 24/382 (6%)
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL--DAWNVFSSI--ARKDITSWG 251
C G LHA +KS SH N+LI Y+ R L A+ VF I A +D+ SW
Sbjct: 27 CPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWN 86
Query: 252 SMIDGFSK---LDFARTVFNEMESPN--LASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
S+++ S+ LD A + F M S + L S ++ A + + A A + +
Sbjct: 87 SLLNPLSRHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACK 145
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHS--------YIIKKGFYSNVPVCNAILQHQAGE 358
IP + S + CTS L++Y + I S + F + V + + E
Sbjct: 146 IPSAV---SNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEE 202
Query: 359 LFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
F LF LML ++ V+ A + L MG Q+H I+K GL V V N L+
Sbjct: 203 AFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLV 262
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY K G +G+A +F + + ++WS++I GYAQ G + A+ +F +M ++G P
Sbjct: 263 TMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEF 322
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VGVL A S +G + G Q + +M + G +S +VD+ A+ G + +A++ +Q
Sbjct: 323 TFVGVLNASSDLGALAVGKQAHGLMV-KLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQ 381
Query: 538 MAFDDDIVVWKSLLASCKTHGN 559
+ ++ DIV+W ++++ +G
Sbjct: 382 L-YEVDIVLWTAMVSGHVQNGE 402
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 185/622 (29%), Positives = 298/622 (47%), Gaps = 114/622 (18%)
Query: 119 NHILNMYGKC--GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
N+IL Y KC G L A +FDEMP ++ V+W MI G ++G AA E M + G
Sbjct: 38 NNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRG 97
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD-- 234
D +TFGSI++ + C LG+Q+H+ ++K + + + +AL+ MY K +R+ D
Sbjct: 98 FQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAY 157
Query: 235 ------------AWNV----FSSIARKDITSWG--------------------SMIDG-- 256
+WN F + +D W +++DG
Sbjct: 158 DVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDK 217
Query: 257 FSKLDF---------------------------------ARTVFN-EMESPNLASWNTII 282
F KL A+ VF+ + + +L +WN+++
Sbjct: 218 FYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSML 277
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
+A +LF EM PD T ++ AC + G H+ +IK+G
Sbjct: 278 VAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLE 337
Query: 343 SNVPVCNAILQ-----------------------------------HQAG---ELFRLFS 364
+V +CNA++ Q G + +LF
Sbjct: 338 ESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFG 397
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
M +S + D ++ V+ +C+ +A L++G Q+H +KTG + FV + L+ MY KCG
Sbjct: 398 HMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCG 457
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
+ A + F ++W+S++ YAQ G G+ AL LF MR V+ +HVT V VLT
Sbjct: 458 IIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLT 517
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
ACSHVGLVE+G + + M+++YGI P E +C VDL RAG + EA+ I+ M F +
Sbjct: 518 ACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNA 577
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
+V K+LL +C+ GN+++ + A +L+++P V+L N+Y +W++ A + M
Sbjct: 578 MVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLM 637
Query: 605 KERGVRKVPGQSWIEIQTKIHA 626
+ER V+KVPG SWIE++ ++HA
Sbjct: 638 RERKVKKVPGWSWIEVKNEVHA 659
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKC--GSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
HC K+G+ ++V N ++ Y KC G L A +LF+ M D V+W+++I GY + G
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
A + + M+ G + + T +L +H + G Q++ ++ + G +
Sbjct: 82 NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIV-KIGYEQSVYAG 140
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
S ++D+ A+ RV +A D M + V W +L+ G V VG R
Sbjct: 141 SALLDMYAKCERVEDAYDVFQGMPV-RNFVSWNALI-----DGFVQVGDR 184
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 270/496 (54%), Gaps = 41/496 (8%)
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
VQ+L P + ++++ C + G+Q+HAH IK+ L N L+ MY K
Sbjct: 108 VQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRLLDMYAKC 166
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVA 286
++DA VF + +D+ SW MI G+ K + AR +F++M + + SW II+G
Sbjct: 167 GSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCV 226
Query: 287 SCSNANEAMSLFSEMGDRELIP-DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
+ EA+ L+ M + + T+ S L A + SL+ G +IH +I++ G S+
Sbjct: 227 QHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDE 286
Query: 346 PV----------CNAILQHQ--------------------------AGELFRLFSLMLAS 369
V C +I + + E F LF ++ S
Sbjct: 287 VVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNS 346
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
P+ TF V+ ACA +A+ ++G Q+H Y+++ G + L+ MY KCG + +A
Sbjct: 347 NIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENA 406
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+ +F + PD+ SW+SL+VGYAQ G ++AL F + SG +P+ + +GVL+AC+H
Sbjct: 407 KSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHA 466
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
GLV++GL+ + ++ ++G+ T + +C++DLLARAG+ EAE IN+M D +W +
Sbjct: 467 GLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAA 526
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LL C+ HGN+++ KRAA+++ +I+P N A V L NIYAS+G E A + +M RG+
Sbjct: 527 LLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGI 586
Query: 610 RKVPGQSWIEIQTKIH 625
K PG SWIEI+ ++H
Sbjct: 587 VKKPGMSWIEIRREVH 602
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 32/372 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
++A + D R + W + S + N EAL + +Q + + T + +
Sbjct: 200 FEKARNLFDKMPNRDNFSWT-AIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSAL 258
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
+A +++ SL +G+K+H HI+ D V+ +L+MYGKCGS+E+AR +FD+M +R+VV
Sbjct: 259 AASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVV 318
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SWT MI +NG+ L+ ++ S +MP+ FTF ++ AC+ L LG+Q+HA++
Sbjct: 319 SWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYM 378
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
++ S + +AL+ MY+K I +A +VF + + D+ SW S++ G+
Sbjct: 379 VRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGY---------- 428
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
A ++A+ F + PDG+ +L AC +
Sbjct: 429 ------------------AQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVD 470
Query: 328 QGMQ-IHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G++ HS K G + C L +AG+ S++ KPD + ++G
Sbjct: 471 KGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGG 530
Query: 385 CAAMASLEMGTQ 396
C +LE+ +
Sbjct: 531 CRIHGNLELAKR 542
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 194/478 (40%), Gaps = 113/478 (23%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRI---------RP--STYADLISACSSLRSLQLGRKV 102
LC L+ EA+ D L + R +P S Y L+ C R+L+ G++V
Sbjct: 85 LCDSKLFKEAI---DILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQV 141
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE---------------------- 140
H HI +S + N +L+MY KCGSL DA VFDE
Sbjct: 142 HAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNF 200
Query: 141 ---------MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIRA 190
MP R+ SWTA+I+GC Q+ + A+ELY M + ++ T S + A
Sbjct: 201 EKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAA 260
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
+ + + +G+++H H+++ S + +L+ MY K I +A +F + +D+ SW
Sbjct: 261 SAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSW 320
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+MI + K E +LF + + ++P+
Sbjct: 321 TTMIHTYLK----------------------------NGRREEGFALFRHLMNSNIMPND 352
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------ 352
T +L AC + G QIH+Y+++ GF S +A++
Sbjct: 353 FTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEI 412
Query: 353 -----------------QH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
QH Q + F L+L S TKPD I F V+ ACA ++ G
Sbjct: 413 LPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKG 472
Query: 395 TQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG 450
+ H K GL + ++D+ + G A + N M PD W++L+ G
Sbjct: 473 LEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGG 530
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 287/548 (52%), Gaps = 17/548 (3%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
IS S +++ L +KV I++ Q + + +++ + + AR +FD P
Sbjct: 70 FISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPK 129
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V W A+ G N + L+ +M + P+ FTF ++++C+ + G ++H
Sbjct: 130 VELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHC 189
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDF 262
VIK + LI +Y+ I A+ +F + ++I +W SMI G+ +++
Sbjct: 190 EVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVAL 249
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR +F+ ++ WN +++G + A LF M R D ++ ++L +
Sbjct: 250 ARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR----DTMSWNTMLNGYAN 305
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLASQ-TKPDHI 376
+ Q+ + ++ +S N ++ A E+ R F ML P+
Sbjct: 306 NGDVEACEQLFEEMPERNVFS----WNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDA 361
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T V+ ACA + +L++G +H Y G ++V N L+DMY KCG + +A E+F M
Sbjct: 362 TLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM 421
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ D+++W+S+I G A GCG +AL LF +M+ +G +P+ +T +GVL +C+H+GLVEEG
Sbjct: 422 DLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGT 481
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ M NEY I P E C+VDL RAG + A +F+ +M + D V+W +LL +C+
Sbjct: 482 SYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRI 541
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
+ N+D+ + A + ++ ++P N A VLL NIY G+W++VARL M++ G +K+PG S
Sbjct: 542 YKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCS 601
Query: 617 WIEIQTKI 624
IE+ +
Sbjct: 602 LIEVNDSV 609
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 183/435 (42%), Gaps = 88/435 (20%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
Y E + F +++ +RP+ T+ ++ +C+ + + G ++H ++ + +
Sbjct: 145 FYREVVFLFGKMKS---MDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQF 201
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
+ ++++Y ++ A +F M +RN+V+WT+MI+G Y+
Sbjct: 202 VATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISG-------------YI------ 242
Query: 177 LMPDQFTFGSIIRACSGLCC-VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
LC V L R+L + + ++ N +++ Y + + A
Sbjct: 243 -----------------LCNRVALARRLFDLAPERD----VVLWNIMVSGYIEIGDMKAA 281
Query: 236 WNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+F ++ +D SW +M++G++ ++ +F EM N+ SWN +I G A
Sbjct: 282 RKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFF 341
Query: 293 EAMSLFSEMG-DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
E + F M D ++P+ T+ ++L AC +L G +H Y GF ++ V NA+
Sbjct: 342 EVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNAL 401
Query: 352 LQ--------HQAGELFR----------------------------LFSLMLASQTKPDH 375
+ A E+F LF M + KPD
Sbjct: 402 IDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDG 461
Query: 376 ITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
ITF V+ +C + +E GT + + + +A + ++D++ + G L A E
Sbjct: 462 ITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVK 521
Query: 435 FME-DPDVVSWSSLI 448
M + D V W++L+
Sbjct: 522 RMPMEADAVIWAALL 536
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 268/507 (52%), Gaps = 68/507 (13%)
Query: 158 QNGQENAAIELY-VQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-GS 214
+ Q + LY + ++Q G L+PD + +++ C+ L V GR +HAH++ S +
Sbjct: 62 RKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDN 121
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
HL+ QN ++ MY K LD AR +F+EM + +
Sbjct: 122 HLVLQNIIVNMYAKC----------------------------GCLDDARRMFDEMPTKD 153
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
+ +W +IAG + + +A+ LF +M L P+ T+ SLL A S L G Q+H+
Sbjct: 154 MVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHA 213
Query: 335 YIIKKGFYSNVPVCNAILQHQA---------------------------------GELFR 361
+ +K G+ S+V V +A++ A GE
Sbjct: 214 FCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEH 273
Query: 362 LFSLMLASQTK---PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
L+ Q K P H T++ V ACA++ +LE G +H +++K+GL L F+ N L+D
Sbjct: 274 ALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLD 333
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY K GS+ A+ +F+ + PDVVSW++++ G AQ G G+E L F +M G+ PN ++
Sbjct: 334 MYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEIS 393
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ VLTACSH GL++EGL + +M+ +Y + P VDLL R G + AE FI +M
Sbjct: 394 FLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM 452
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
+ VW +LL +C+ H N+++G AAE ++DP +S +LL NIYAS+G+W +VA
Sbjct: 453 PIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVA 512
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ MKE GV+K P SW+EI+ +H
Sbjct: 513 KVRKMMKESGVKKQPACSWVEIENAVH 539
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 287/548 (52%), Gaps = 17/548 (3%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
IS S +++ L +KV I++ Q + + +++ + + AR +FD P
Sbjct: 28 FISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPK 87
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V W A+ G N + L+ +M + P+ FTF ++++C+ + G ++H
Sbjct: 88 VELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHC 147
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDF 262
VIK + LI +Y+ I A+ +F + ++I +W SMI G+ +++
Sbjct: 148 EVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVAL 207
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR +F+ ++ WN +++G + A LF M R D ++ ++L +
Sbjct: 208 ARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR----DTMSWNTMLNGYAN 263
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLASQ-TKPDHI 376
+ Q+ + ++ +S N ++ A E+ R F ML P+
Sbjct: 264 NGDVEACEQLFEEMPERNVFS----WNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDA 319
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T V+ ACA + +L++G +H Y G ++V N L+DMY KCG + +A E+F M
Sbjct: 320 TLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM 379
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ D+++W+S+I G A GCG +AL LF +M+ +G +P+ +T +GVL +C+H+GLVEEG
Sbjct: 380 DLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGT 439
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ M NEY I P E C+VDL RAG + A +F+ +M + D V+W +LL +C+
Sbjct: 440 SYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRI 499
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
+ N+D+ + A + ++ ++P N A VLL NIY G+W++VARL M++ G +K+PG S
Sbjct: 500 YKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCS 559
Query: 617 WIEIQTKI 624
IE+ +
Sbjct: 560 LIEVNDSV 567
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 183/435 (42%), Gaps = 88/435 (20%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
Y E + F +++ +RP+ T+ ++ +C+ + + G ++H ++ + +
Sbjct: 103 FYREVVFLFGKMKS---MDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQF 159
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
+ ++++Y ++ A +F M +RN+V+WT+MI+G Y+
Sbjct: 160 VATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISG-------------YI------ 200
Query: 177 LMPDQFTFGSIIRACSGLCC-VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
LC V L R+L + + ++ N +++ Y + + A
Sbjct: 201 -----------------LCNRVALARRLFDLAPERD----VVLWNIMVSGYIEIGDMKAA 239
Query: 236 WNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
+F ++ +D SW +M++G++ ++ +F EM N+ SWN +I G A
Sbjct: 240 RKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFF 299
Query: 293 EAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
E + F M D ++P+ T+ ++L AC +L G +H Y GF ++ V NA+
Sbjct: 300 EVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNAL 359
Query: 352 --------LQHQAGELFR----------------------------LFSLMLASQTKPDH 375
L A E+F LF M + KPD
Sbjct: 360 IDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDG 419
Query: 376 ITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
ITF V+ +C + +E GT + + + +A + ++D++ + G L A E
Sbjct: 420 ITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVK 479
Query: 435 FME-DPDVVSWSSLI 448
M + D V W++L+
Sbjct: 480 RMPMEADAVIWAALL 494
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 356 AGELFRLFSLMLASQTKPDHIT---FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+G++ +L L+ ++Q P + F ++ +C +A L+ ++ I+ G + +V
Sbjct: 5 SGKIAKL--LLYSAQKHPRWVLEEHFISLLRSCKTVALLQ---KVQAQIITHGFQYNGYV 59
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
++ +V + AR LF+ DP V W+++ GY E + LF +M+S V
Sbjct: 60 APNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDV 119
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLY-------------------------RIMQNEYG 507
RPN T VL +C+ +G EG +++ R + + Y
Sbjct: 120 RPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYK 179
Query: 508 IIPTRERRSCVVDLLARAG-----RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ R+ V +G RV A + +A + D+V+W +++ G +++
Sbjct: 180 LFVGMLERNIVAWTSMISGYILCNRVALARRLFD-LAPERDVVLWNIMVS-----GYIEI 233
Query: 563 GK-RAAENILKIDP-TNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
G +AA + P ++ + + N YA++G E +L M ER V
Sbjct: 234 GDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNV 282
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 186/626 (29%), Positives = 301/626 (48%), Gaps = 95/626 (15%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
+F+ + + YA+ + C G+ +H IL D N +LNMY K
Sbjct: 26 EFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVK 85
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI 187
L DA +FDEMP+RN +S+ +I G +++ + AIEL+V++ + G + F F +I
Sbjct: 86 SDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTI 145
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
++ C LG +HA + K H S+ ALI Y+ R+
Sbjct: 146 LKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRV--------------- 190
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
D AR VF+ + ++ SW ++ A EA+ LFS+M
Sbjct: 191 -------------DVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237
Query: 308 PDGLTVRSLLCACTS-------------------PLSLYQGMQIHSYIIKKG-------F 341
P+ T S+ AC L LY G+ + K G
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRA 297
Query: 342 YSNVPVCNAI----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ +P + I Q+ E +F M + P+ TF V+ ACA M L
Sbjct: 298 FEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGL 357
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+G Q+HC+++K GL DVFV N LMD+Y KCG + ++ ELF + V+W+++IVG+
Sbjct: 358 NLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGH 417
Query: 452 AQFGCGEEALKLFRRM-------------------------------RSSGVRPNHVTLV 480
Q G GE+AL+LF M S V+P+ +T V
Sbjct: 418 VQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFV 477
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
GVL+AC++ GL+++G + M ++GI P E +C+V LL R G + +A I+++ F
Sbjct: 478 GVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPF 537
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARL 600
++VW++LL +C H ++++G+ +A+ +L+++P + A VLL N+YA++ +W+ VA +
Sbjct: 538 QPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASV 597
Query: 601 MGSMKERGVRKVPGQSWIEIQTKIHA 626
+MK +GV+K PG SWIE Q +H+
Sbjct: 598 RKNMKRKGVKKEPGLSWIESQGTVHS 623
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 200/432 (46%), Gaps = 68/432 (15%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ +C +D A EV D L + W + + + + + EAL F ++ F+
Sbjct: 182 DAYSVCGRVDVAREVFDGILYKDMVSWT-GMVTCFAENDCFKEALKLFSQMRM-VGFKPN 239
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+A + AC L + +G+ VH L S+ + D + +L++Y K G ++DAR F+
Sbjct: 240 NFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFE 299
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E+P+++V+ W+ MIA +Q+ Q A+E++ QM Q+ ++P+QFTF S+++AC+ + + L
Sbjct: 300 EIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNL 359
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS-SIARKDITSWGSMIDGFS 258
G Q+H HVIK S + NAL+ +Y K R+ ++ +F+ S R D+T
Sbjct: 360 GNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT---------- 409
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
WNT+I G + +A+ LF M + + +T S L
Sbjct: 410 -------------------WNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 450
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
AC S +L G+QIHS + KPD +TF
Sbjct: 451 ACASLAALEPGLQIHSLTV----------------------------------KPDKLTF 476
Query: 379 NDVMGACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
V+ ACA L+ G I G+ + ++ + + G L A +L + +
Sbjct: 477 VGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIP 536
Query: 438 -DPDVVSWSSLI 448
P V+ W +L+
Sbjct: 537 FQPSVMVWRALL 548
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 170/582 (29%), Positives = 290/582 (49%), Gaps = 74/582 (12%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF-DEMPQRN 145
+ A + ++L G+++H ++L + + ++NMY KC + A +F D + N
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V ++ A+I+G NG E Y +M G++PD+FTF I+AC + + +++H
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHG 160
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+ K + +AL+ Y KF ++ A+
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKF----------------------------GLMEHAQV 192
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
F E+ ++ WN ++ G A + F M D ++P TV +L
Sbjct: 193 AFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGD 252
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF----------------- 360
L G IH + +K G+ S V V N+++ A E+F
Sbjct: 253 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSV 312
Query: 361 -----------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
RL ML + +PD +T V+ AC+ +A+L G ++H Y++ +GL D
Sbjct: 313 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 372
Query: 410 ------VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
V + N ++DMY KCGS+ A +F M + DV SW+ +I+GY G G EAL++
Sbjct: 373 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEM 432
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM ++P+ VT VGVL+ACSH G V +G M+++Y + PT E +CV+D+L
Sbjct: 433 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLG 492
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG++ EA + M + + VVW++LLA+C+ H + + + AA+ + +++P + + VL
Sbjct: 493 RAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVL 552
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ N+Y + G++EEV + +M+++ VRK PG SWIE++ +H
Sbjct: 553 MSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVH 594
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 43/316 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++S + + L GR +H + + N +++MYGKC +EDA +F+ M
Sbjct: 239 TVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMM 298
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++++ SW ++++ Q G + + L +ML +G+ PD T +++ ACS L + GR
Sbjct: 299 REKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGR 358
Query: 202 QLHAHVIKSEHGS------HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
++H ++I S G ++ +NA+I MY K + DA VF ++ KD+ SW MI
Sbjct: 359 EIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM 418
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+ + NEA+ +FS M + +L PD +T
Sbjct: 419 GYGMHGY----------------------------GNEALEMFSRMCEVQLKPDEVTFVG 450
Query: 316 LLCACTSPLSLYQGMQIHSYIIK-KGFYSNVP-----VCNAILQHQAGELFRLFSLMLAS 369
+L AC+ + QG +++++ K Y P C + +AG+L + L L
Sbjct: 451 VLSACSHAGFVSQG---RNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTM 507
Query: 370 QTKPDHITFNDVMGAC 385
+ + + + ++ AC
Sbjct: 508 PIEANPVVWRALLAAC 523
>gi|359481504|ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 291/567 (51%), Gaps = 83/567 (14%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHIL---SSKCQPDAVLHNHI 121
+ + L + F+ + T+A AC+ L+ Q ++H + ++ +PD I
Sbjct: 4 IVYKTLHSLAKFKPQRETHA---LACNQLKESQ---RIHGRAIKLGTTILEPD------I 51
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
+ Y +L DA +FDE+P +VVS TA I ++ AI + +ML + P+Q
Sbjct: 52 VCSYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQ 111
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
F+FG++I + + L + GRQLHA IK S++ +A++ Y K I +A F
Sbjct: 112 FSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFED 171
Query: 242 IARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
++ S+ ++I G+ + D A +F +M N+ SWN +I+G +
Sbjct: 172 THEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISG-------------Y 218
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE 358
S+MG E E
Sbjct: 219 SQMGYNE----------------------------------------------------E 226
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
LF +ML T P+ TF + A A +A+L MG H +K DVF+ N L+
Sbjct: 227 AVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVS 286
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
Y KCGS+ + +FN + ++VSW++LI GYA G G EA+ F +M+ +G+RPN VT
Sbjct: 287 FYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVT 346
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
L+G+L AC+H GLV++G + + E + T E +C+VDLL+R+GR EAE F++++
Sbjct: 347 LLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEAEKFLHEL 406
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
F I WK+LL C+ H N+++G+ AA IL +DP + ++ V+L N ++++G+W+ V+
Sbjct: 407 PFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVS 466
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ M+E+ ++ VPG SWIEI++K+H
Sbjct: 467 MIRKEMREKRMKGVPGSSWIEIRSKVH 493
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 41 RFDDIWDFDLFSSLCKQNL--------------YNEALVAFDFLQNNTNFRIRPSTYADL 86
RFDD LF + ++N+ YNE V + T+
Sbjct: 192 RFDDA--LALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTFPCA 249
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
ISA +++ +L +GR H + + D + N +++ Y KCGS+E++ +VF+ +P++N+
Sbjct: 250 ISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNI 309
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVG 198
VSW A+I G + +G+ AI + +M +GL P+ T ++ AC SGL G
Sbjct: 310 VSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHSGLVDKG 363
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/582 (29%), Positives = 290/582 (49%), Gaps = 74/582 (12%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF-DEMPQRN 145
+ A + ++L G+++H ++L + + ++NMY KC + A +F D + N
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V ++ A+I+G NG E Y +M G++PD+FTF I+AC + + +++H
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHG 160
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+ K + +AL+ Y KF ++ A+
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKF----------------------------GLMEHAQV 192
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
F E+ ++ WN ++ G A + F M D ++P TV +L
Sbjct: 193 AFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGD 252
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF----------------- 360
L G IH + +K G+ S V V N+++ A E+F
Sbjct: 253 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSV 312
Query: 361 -----------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
RL ML + +PD +T V+ AC+ +A+L G ++H Y++ +GL D
Sbjct: 313 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 372
Query: 410 ------VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
V + N ++DMY KCGS+ A +F M + DV SW+ +I+GY G G EAL++
Sbjct: 373 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEM 432
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM ++P+ VT VGVL+ACSH G V +G M+++Y + PT E +CV+D+L
Sbjct: 433 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLG 492
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
RAG++ EA + M + + VVW++LLA+C+ H + + + AA+ + +++P + + VL
Sbjct: 493 RAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVL 552
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ N+Y + G++EEV + +M+++ VRK PG SWIE++ +H
Sbjct: 553 MSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVH 594
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 43/316 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++S + + L GR +H + + N +++MYGKC +EDA +F+ M
Sbjct: 239 TVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMM 298
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++++ SW ++++ Q G + + L +ML +G+ PD T +++ ACS L + GR
Sbjct: 299 REKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGR 358
Query: 202 QLHAHVIKSEHGS------HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
++H ++I S G ++ +NA+I MY K + DA VF ++ KD+ SW MI
Sbjct: 359 EIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM 418
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+ + NEA+ +FS M + +L PD +T
Sbjct: 419 GYGMHGY----------------------------GNEALEMFSRMCEVQLKPDEVTFVG 450
Query: 316 LLCACTSPLSLYQGMQIHSYIIK-KGFYSNVP-----VCNAILQHQAGELFRLFSLMLAS 369
+L AC+ + QG +++++ K Y P C + +AG+L + L L
Sbjct: 451 VLSACSHAGFVSQG---RNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTM 507
Query: 370 QTKPDHITFNDVMGAC 385
+ + + + ++ AC
Sbjct: 508 PIEANPVVWRALLAAC 523
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 272/510 (53%), Gaps = 34/510 (6%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++ +Y CG AR +FDE+ +NVV + MI N A+ +Y M G +PD
Sbjct: 60 LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+T+ +++A S + +G Q+H V+K +L N LIAMY K + +A V
Sbjct: 120 MYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD 179
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
I +D+ SW SM+ + A N+A+ L E
Sbjct: 180 EIPCRDVVSWNSMVSVY----------------------------AQNGRFNDALELCRE 211
Query: 301 MGDRELIPDGLTVRSLLCACTSPLS---LYQGMQIHSYIIKKGFYS-NVPVCNAILQHQA 356
M L P+ T+ SLL A T+ S LY ++ + KK S NV + +
Sbjct: 212 MEALNLKPNDCTMASLLPAVTNTTSDNVLYVK-EMFLKLTKKSVISWNVMIAMYVNNSMP 270
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E L+S M A+ +PD ++ V+ A +++L +G ++H + + L ++ + N L
Sbjct: 271 KEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENAL 330
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+DMY KCG L AR +FN M+ DVVSW+S+I Y + G G +A+ +F MR+SG+ P+
Sbjct: 331 IDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDS 390
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+ V VL ACSH GL+++G + +M E GI P E +CVVDLL RAG++ EA FI
Sbjct: 391 IAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAYGFIR 449
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
QM + D VW LL++C+ + N+++G AA+ +L ++P +S VLL NIYA +G+W +
Sbjct: 450 QMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWAD 509
Query: 597 VARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VA + M+ +G++K+PG S +E+ +H
Sbjct: 510 VAAIRSIMERKGIKKLPGISNVELNDGVHT 539
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 185/405 (45%), Gaps = 57/405 (14%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD+I D + + S +LY +AL+ + + F TY ++ A S S
Sbjct: 77 FDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQ-GFVPDMYTYPCVLKASSRSDS 135
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L +G ++H +L + + N ++ MYGKC SL++A+ V DE+P R+VVSW +M++
Sbjct: 136 LWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSV 195
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC--VGLGRQLHAHVIKSEHG 213
+QNG+ N A+EL +M L P+ T S++ A + V +++ + K
Sbjct: 196 YAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKS-- 253
Query: 214 SHLISQNALIAMYTK-------------------------FDRILDAWNVFSSIA----- 243
+IS N +IAMY +L A+ S+++
Sbjct: 254 --VISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRV 311
Query: 244 -----RKDITS----WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
RK + ++ID ++K L AR VFN+M+ ++ SW +II+ C
Sbjct: 312 HKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQG 371
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP--VCN 349
+A+++F+EM + L PD + S+L AC+ L G + + + G + C
Sbjct: 372 RDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACV 431
Query: 350 AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
L +AG++ + + +PD + ++ AC +++ +G
Sbjct: 432 VDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIG 476
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSY---IIKKGFYSNVPVCNAILQHQAGELFRLFSLM 366
G+ + + AC P G+ H + K + NV + + + H + ++ M
Sbjct: 57 GIKLMRVYAACGEP-----GLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTM 111
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
PD T+ V+ A + SL +G Q+H ++K GL L+++V NGL+ MY KC SL
Sbjct: 112 YTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSL 171
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A+++ + + DVVSW+S++ YAQ G +AL+L R M + ++PN T+ +L A
Sbjct: 172 KEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAV 231
Query: 487 SHV 489
++
Sbjct: 232 TNT 234
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 306/628 (48%), Gaps = 81/628 (12%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD I + D++ S + +E + F ++ T+ ++ AC R+
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RT 165
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+ G K+H L D + ++++Y + ++ +AR++FDEMP R++ SW AMI+G
Sbjct: 166 VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 225
Query: 156 CSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
Q+G A+ L +GL D T S++ AC+ G +H++ IK S
Sbjct: 226 YCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
L N LI +Y +F R+ D + VF+ M +
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDC----------------------------QKVFDRMYVRD 312
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
L SWN+II A+SLF EM + PD LT+ SL + + +
Sbjct: 313 LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 335 YIIKKG-FYSNVPVCNAIL------------------------------------QHQAG 357
+ ++KG F ++ + NA++ A
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 358 ELFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E ++++M + + T+ V+ AC+ +L G +LH ++K GL LDVFV+ L
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
DMY KCG L A LF + + V W++LI + G GE+A+ LF+ M GV+P+H
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+T V +L+ACSH GLV+EG + +MQ +YGI P+ + C+VD+ RAG++ A FI
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
M+ D +W +LL++C+ HGNVD+GK A+E++ +++P + VLL N+YAS+GKWE
Sbjct: 613 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 672
Query: 597 VARLMGSMKERGVRKVPGQSWIEIQTKI 624
V + +G+RK PG S +E+ K+
Sbjct: 673 VDEIRSIAHGKGLRKTPGWSSMEVDNKV 700
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 78/505 (15%)
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+LQ + +H ++ SK + + ++N+Y G++ AR FD + R+V +W MI+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 155 GCSQNGQENAAIELY-VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G + G + I + + ML SGL PD TF S+++AC V G ++H +K
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ +LI +Y+++ + +A +F + +D+ SW +MI G+ +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ-------------- 228
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
NA EA++L + G R + D +TV SLL ACT +G+ IH
Sbjct: 229 --------------SGNAKEALTLSN--GLRAM--DSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 334 SYIIKKGFYSNVPVCNAI------------------------------------LQHQAG 357
SY IK G S + V N + L Q
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL-DVFVMNGL 416
LF M S+ +PD +T + + + + + + ++ G L D+ + N +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG-VRPN 475
+ MY K G + SAR +FN++ + DV+SW+++I GYAQ G EA++++ M G + N
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 476 HVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
T V VL ACS G + +G++L+ R+++N G+ + + D+ + GR+ +A
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 535 INQMAFDDDIVVWKSLLASCKTHGN 559
Q+ + V W +L+A HG+
Sbjct: 509 FYQIPRVNS-VPWNTLIACHGFHGH 532
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
L+D A V + +L D I + S + +EA+ ++ ++ T+ +
Sbjct: 399 LVDSARAVFN-WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ ACS +L+ G K+H +L + D + + +MYGKCG LEDA +F ++P+ N
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
V W +IA +G A+ L+ +ML G+ PD TF +++ ACS V G Q
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-QWCFE 576
Query: 207 VIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
++++++G L ++ MY + ++ A S++ + D + WG+++
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+L+ LH ++ + +V + L+++Y G++ AR F+ +++ DV +W+ +I
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 449 VGYAQFGCGEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
GY + G E ++ F M SSG+ P++ T VL AC V +G +++ + ++G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIH-CLALKFG 180
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
+ + ++ L +R V A ++M D+ W ++++ GN +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPV-RDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 568 ENILKIDPTNSAALVLLCN 586
+ +D +L+ C
Sbjct: 240 NGLRAMDSVTVVSLLSACT 258
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 281/550 (51%), Gaps = 71/550 (12%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N ++ Y G L +AR +F E P R+ ++W+++I+G + G + A+EL+ +M G
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P+QFT+GS++R CS + G+Q+HAH IK++ S+ L+ MY K IL+A +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
F K N W ++ G + + ++A+ F
Sbjct: 196 FELAPDKR---------------------------NHVLWTAMVTGYSQNGDGHKAIECF 228
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQA 356
+M + + T S+L AC S + G Q+H I++ GF +NV V +A+ + +
Sbjct: 229 RDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKC 288
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF----- 411
G+L ML + D +++N ++ C E L + + +D F
Sbjct: 289 GDLSNA-RRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL 347
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+DMY K G A ++F M D DV+SW+SL+ G G EEAL+LF MR G
Sbjct: 348 VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 407
Query: 472 VRPNHVTLVGVLTAC--------SHVGLVEE----------------------------G 495
+ P+ + + VL+A + G +E+ G
Sbjct: 408 IHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRG 467
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
++ M+ YGI P E +C++DLL R+G++ EA++ +NQMA D VWK+LLA+C+
Sbjct: 468 RDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACR 527
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
HGNV++G+RAA N+ +++P N+ VLL N+Y+++GKWEE A+ MK RGV K PG
Sbjct: 528 VHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGC 587
Query: 616 SWIEIQTKIH 625
SWIE+ +K+H
Sbjct: 588 SWIEMSSKVH 597
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 211/481 (43%), Gaps = 39/481 (8%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
L S C+ EAL F +Q RP+ T+ ++ CS L+ G+++H H +
Sbjct: 109 LISGYCRYGCDVEALELFWEMQYEGE---RPNQFTWGSVLRVCSMYVLLEKGKQIHAHAI 165
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP-QRNVVSWTAMIAGCSQNGQENAAI 166
++ +A + +++MY KC + +A +F+ P +RN V WTAM+ G SQNG + AI
Sbjct: 166 KTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAI 225
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
E + M G+ +QFTF SI+ AC + G G Q+H +++S G+++ +AL+ MY
Sbjct: 226 ECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMY 285
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDG-------------FSKLDFARTVFNEMESP 273
+K + +A + ++ D SW SMI G F + +E P
Sbjct: 286 SKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYP 345
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+L + N ++ A + A +F +M D+++I + SL+ C S + +++
Sbjct: 346 SLVN-NALVDMYAKRGYFDYAFDVFEKMTDKDVI----SWTSLVTGCVHNGSYEEALRLF 400
Query: 334 SYIIKKGFYSNVPVCNAILQHQAGELFRLFS---LMLASQTKPDHITFNDVMGACAAMAS 390
+ G + + V A+L L +++ + + D + DV+ A +
Sbjct: 401 CEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVG 460
Query: 391 LEMGTQLHCYIMKT----GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWS 445
+ Y G+ ++D+ + G L A+EL N M PD W
Sbjct: 461 YAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 520
Query: 446 SLIVG---YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+L+ + GE A + P +V L + +A G EE + R+M
Sbjct: 521 ALLAACRVHGNVELGERAANNLFELEPKNAVP-YVLLSNLYSA---AGKWEEAAKTRRLM 576
Query: 503 Q 503
+
Sbjct: 577 K 577
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 45/220 (20%)
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD---- 440
C + E+ + ++ G N ++ KCG + AR+LF+ M D D
Sbjct: 16 CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75
Query: 441 ---------------------------VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
++WSSLI GY ++GC EAL+LF M+ G R
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
PN T VL CS L+E+G Q++ + + + T +VD+ A+ +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTG-----LVDMYAKCKCIL 190
Query: 530 EAEDFINQMAFDD-DIVVWKSLLASCKTHGNVDVGKRAAE 568
EAE ++ ++A D + V+W +++ +G+ G +A E
Sbjct: 191 EAE-YLFELAPDKRNHVLWTAMVTGYSQNGD---GHKAIE 226
>gi|15238469|ref|NP_200768.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170472|sp|Q9FGR2.1|PP436_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g59600
gi|10177776|dbj|BAB11040.1| unnamed protein product [Arabidopsis thaliana]
gi|71143062|gb|AAZ23922.1| At5g59600 [Arabidopsis thaliana]
gi|332009827|gb|AED97210.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 298/552 (53%), Gaps = 34/552 (6%)
Query: 74 TNFRIRP-STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE 132
++FR+ +Y +LI A R GR +H H+++S + ++ Y +CG +
Sbjct: 9 SSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVL 68
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
DAR VFDEMP+R++ MI C++NG +++ + +M + GL D F S+++A
Sbjct: 69 DARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASR 128
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L G+ +H V+K + S ++LI MY+KF + +A
Sbjct: 129 NLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNA----------------- 171
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
R VF+++ +L +N +I+G A+ S A+EA++L +M + PD +T
Sbjct: 172 -----------RKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVIT 220
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLML 367
+L+ + + + +I + G+ +V +I+ Q + F F ML
Sbjct: 221 WNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML 280
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
P+ T ++ AC +A ++ G ++H Y + TGL FV + L+DMY KCG +
Sbjct: 281 THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFIS 340
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A LF V+++S+I YA G ++A++LF +M ++G + +H+T +LTACS
Sbjct: 341 EAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACS 400
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GL + G L+ +MQN+Y I+P E +C+VDLL RAG++ EA + I M + D+ VW
Sbjct: 401 HAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVW 460
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LLA+C+ HGN+++ + AA+++ +++P NS +LL ++YA++G WE V R+ +K++
Sbjct: 461 GALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKK 520
Query: 608 GVRKVPGQSWIE 619
R+ G SW+E
Sbjct: 521 RFRRFLGSSWVE 532
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 108/208 (51%), Gaps = 18/208 (8%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
N NE AFD + + P +T L+ AC++L ++ G+++H + + + +
Sbjct: 265 HNFQNEK--AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDH 322
Query: 115 AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
+ + +L+MYGKCG + +A ++F + P++ V++ +MI + +G + A+EL+ QM
Sbjct: 323 GFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEA 382
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQL-------HAHVIKSEHGSHLISQNALIAMYT 227
+G D TF +I+ ACS LG+ L + V + EH + ++ +
Sbjct: 383 TGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA------CMVDLLG 436
Query: 228 KFDRILDAWNVFSSI-ARKDITSWGSMI 254
+ ++++A+ + ++ D+ WG+++
Sbjct: 437 RAGKLVEAYEMIKAMRMEPDLFVWGALL 464
>gi|297741541|emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 286/557 (51%), Gaps = 77/557 (13%)
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
++ F+ + T+A AC+ L+ Q ++H + +L I+ Y +L
Sbjct: 292 SDAKFKPQRETHA---LACNQLKESQ---RIHGRAIKLGT---TILEPDIVCSYSASKAL 342
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
DA +FDE+P +VVS TA I ++ AI + +ML + P+QF+FG++I +
Sbjct: 343 WDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSS 402
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
+ L + GRQLHA IK S++ +A++ Y K I +A F ++ S+
Sbjct: 403 TALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYT 462
Query: 252 SMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
++I G+ + D A +F +M N+ SWN +I+G +S+MG E
Sbjct: 463 TLIRGYLKKERFDDALALFRKMPERNVVSWNAMISG-------------YSQMGYNE--- 506
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLA 368
E LF +ML
Sbjct: 507 -------------------------------------------------EAVNLFVVMLR 517
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
T P+ TF + A A +A+L MG H +K DVF+ N L+ Y KCGS+
Sbjct: 518 EGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEE 577
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
+ +FN + ++VSW++LI GYA G G EA+ F +M+ +G+RPN VTL+G+L AC+H
Sbjct: 578 SLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNH 637
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
GLV++G + + E + T E +C+VDLL+R+GR EAE F++++ F I WK
Sbjct: 638 SGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEAEKFLHELPFVPGIGFWK 697
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
+LL C+ H N+++G+ AA IL +DP + ++ V+L N ++++G+W+ V+ + M+E+
Sbjct: 698 ALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVSMIRKEMREKR 757
Query: 609 VRKVPGQSWIEIQTKIH 625
++ VPG SWIEI++K+H
Sbjct: 758 MKGVPGSSWIEIRSKVH 774
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 40 RRFDDIWDFDLFSSLCKQNL--------------YNEALVAFDFLQNNTNFRIRPSTYAD 85
RFDD LF + ++N+ YNE V + T+
Sbjct: 472 ERFDDA--LALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTFPC 529
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
ISA +++ +L +GR H + + D + N +++ Y KCGS+E++ +VF+ +P++N
Sbjct: 530 AISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKN 589
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVG 198
+VSW A+I G + +G+ AI + +M +GL P+ T ++ AC SGL G
Sbjct: 590 IVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHSGLVDKG 644
>gi|147836510|emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/585 (31%), Positives = 300/585 (51%), Gaps = 80/585 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++S+C++ R L+LG +H +IL S + + N +++MY KCG +EDA +FD M
Sbjct: 44 TAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHM 103
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P + VVSWT+M++G Q G + I ++ +ML++ L P+++T I++AC+ + L +
Sbjct: 104 PDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQKRDLKLVQ 162
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---S 258
+H H+IK+ QN+LI YTK ++ A + + +D+ SW S+I G
Sbjct: 163 LIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNG 222
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++ A F EM+ ++ N + L +E T+ +LL
Sbjct: 223 MVEKALLFFFEMQEDGVS------------PNTGDGQYLSTE-----------TIATLLQ 259
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------QHQAGELFRLFS------ 364
C+ L G QIH Y IK GF+ V N+++ A +LFR S
Sbjct: 260 GCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVS 319
Query: 365 -----------------LMLASQTK---------PDHITFNDVMGACAAMASLEMGTQLH 398
LML S+ PD +T + AC+++ASL++G +H
Sbjct: 320 WNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIH 379
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
YI + GL D+FV N L+DMY KCG L A ++ M D+ SW+SLI Y G G
Sbjct: 380 GYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGI 439
Query: 459 EALKLFRRMRSSGV-RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
AL +F++++++G RPN +T +L+AC+H GLV EG ++++ M+ EY + P E +C
Sbjct: 440 SALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFAC 499
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+ E FI +M F+ VW +LL C GN+D+ +R A+ + ++P +
Sbjct: 500 M-----------RPEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLXILEPKS 548
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKE-RGVRKVPGQSWIEIQ 621
A V L N+YAS KWE+ A++ M+ ++K G S +E++
Sbjct: 549 RAWRVALSNVYASVNKWEDAAKVRAEMRRSEELQKEGGWSSVEVR 593
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 25/203 (12%)
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
T D +T V+ +CAA L +G+ +H I+K+GL +VFV N LMDMY KCG + A
Sbjct: 37 HTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDA 96
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS-- 487
+LF+ M D VVSW+S++ G+ Q G +E + +F RM + ++PN TL +L AC+
Sbjct: 97 AKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQK 155
Query: 488 ---------HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
H +++ G + +QN ++D ++G + AE + ++
Sbjct: 156 RDLKLVQLIHCHIIKTGFVMDAFLQNS------------LIDGYTKSGTLVAAEKLMKRL 203
Query: 539 AFDDDIVVWKSLLASCKTHGNVD 561
D+V W S+++ C +G V+
Sbjct: 204 -ICRDVVSWTSVISGCVLNGMVE 225
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 186/430 (43%), Gaps = 79/430 (18%)
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
+ D T ++ +C+ + LG +H +++KS +++ N+L+ MY K RI DA
Sbjct: 39 LSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAK 98
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+F + K + SW SM+ G + R F+E+ +S+
Sbjct: 99 LFDHMPDKTVVSWTSMMSGHCQ----RGAFDEV------------------------ISI 130
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQ 355
F M + L P+ T+ +L AC L IH +IIK GF + + N+++ +
Sbjct: 131 FWRMLE-TLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTK 189
Query: 356 AGELF-------RLF----------------------SLMLASQTKPDHITFN------- 379
+G L RL +L+ + + D ++ N
Sbjct: 190 SGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTGDGQYL 249
Query: 380 ------DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
++ C+ L++G Q+H Y +K G V N L+ MY + +A +LF
Sbjct: 250 STETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLF 309
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG----VRPNHVTLVGVLTACSHV 489
M D+VSW+++I + +AL L + S+G + P+ VT++ + ACS +
Sbjct: 310 RKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSL 369
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
++ G Q+ G+I ++ +VD+ + GR+H AE +M D+ W S
Sbjct: 370 ASLQLG-QVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPV-RDLGSWNS 427
Query: 550 LLASCKTHGN 559
L+A+ +GN
Sbjct: 428 LIAAYGINGN 437
>gi|242077664|ref|XP_002448768.1| hypothetical protein SORBIDRAFT_06g032835 [Sorghum bicolor]
gi|241939951|gb|EES13096.1| hypothetical protein SORBIDRAFT_06g032835 [Sorghum bicolor]
Length = 598
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 274/540 (50%), Gaps = 67/540 (12%)
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
LHNH+L Y KC V DEMP RN VSW+A IAG +Q G+ A+ L+++M +G
Sbjct: 79 LHNHLLIAYFKCRLHRRGLRVLDEMPHRNAVSWSAAIAGLAQGGRPRDALALFIRMRLAG 138
Query: 177 LMPDQFTFGSIIRACS-GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
P++F S + A S G RQL+A ++ S + NA +A + ++ DA
Sbjct: 139 CPPNEFALASALNASSFAPAGTGCARQLYALSVRLGFDSSVFLTNAFLAAMARHGQLEDA 198
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+F+ + +DI S WNT++AG A + +
Sbjct: 199 VRLFNGSSVRDIVS----------------------------WNTLLAGFARHWSV-QGW 229
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
L+ M + DG + ++L + SL G+Q+H+ ++K GF +V V N++++
Sbjct: 230 ILWRRMVREAVRADGFSFSTVLSGLAASTSLASGLQVHAQLVKSGFGDDVYVGNSLVEMY 289
Query: 354 ----------------------------------HQAGELFRLFSLMLASQTKPDHITFN 379
+ + + S M+ P+ TF
Sbjct: 290 MKSKCLADGTMAFAEIRCKDVVSWTGMAAGCLHCGEPSKAIGILSQMMLDGVMPNSYTFA 349
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
ACA++ L+ G ++H Y++K G D+ V N L+DMY KCGS+ A ++F M+
Sbjct: 350 TSANACASLTDLDEGRKVHGYVIKLGDDSDIGVNNALIDMYAKCGSVACAHKVFQSMQQR 409
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
V+SW+++I+G+A G +EA+++F M GV PN VT++ +L ACS G V+EG +
Sbjct: 410 PVISWTAMIMGFAHNGRAQEAVEVFDDMLLKGVAPNRVTMICILYACSQGGFVDEGWIYF 469
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M++++GI P + +C+VDLL +AG + EAE+ I++M F ++VW++LL +C HGN
Sbjct: 470 NAMEDKFGIQPGEDHYACMVDLLGKAGHIEEAEELISRMPFPPGVLVWQALLGACHRHGN 529
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
VG+RAAE+ L ++ + + +LLCN A W+ R G M + K+PG SW +
Sbjct: 530 EAVGRRAAEHALALENDDPSTYMLLCNTLAGQHDWDGARRARGLMGAE-ILKLPGSSWFQ 588
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 123/236 (52%), Gaps = 7/236 (2%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+++ ++S ++ SL G +VH ++ S D + N ++ MY K L D M F E+
Sbjct: 246 SFSTVLSGLAASTSLASGLQVHAQLVKSGFGDDVYVGNSLVEMYMKSKCLADGTMAFAEI 305
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
++VVSWT M AGC G+ + AI + QM+ G+MP+ +TF + AC+ L + GR
Sbjct: 306 RCKDVVSWTGMAAGCLHCGEPSKAIGILSQMMLDGVMPNSYTFATSANACASLTDLDEGR 365
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS--- 258
++H +VIK S + NALI MY K + A VF S+ ++ + SW +MI GF+
Sbjct: 366 KVHGYVIKLGDDSDIGVNNALIDMYAKCGSVACAHKVFQSMQQRPVISWTAMIMGFAHNG 425
Query: 259 KLDFARTVFNEM----ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+ A VF++M +PN + I+ + +E F+ M D+ I G
Sbjct: 426 RAQEAVEVFDDMLLKGVAPNRVTMICILYACSQGGFVDEGWIYFNAMEDKFGIQPG 481
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/593 (29%), Positives = 292/593 (49%), Gaps = 69/593 (11%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSL 93
FD+I D L S+ + L NEA+ + L+ I+P S + + AC +
Sbjct: 89 FDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG---IKPHNSVFLTVAKACGAS 145
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++VHD + DA L N +++ YGKC +E AR VFD++ ++VVSWT+M
Sbjct: 146 GDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMS 205
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+ G + ++ +M +G+ P+ T SI+ ACS L + GR +H ++
Sbjct: 206 SCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMI 265
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
++ +AL+++Y + + A R VF+ M
Sbjct: 266 ENVFVCSALVSLYARCLSVKQA----------------------------RLVFDLMPHR 297
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ SWN ++ + ++ ++LFS+M + + D T +++ C + +++
Sbjct: 298 DVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEML 357
Query: 334 SYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+ GF KP+ IT + + AC+ + SL M
Sbjct: 358 RKMQNLGF------------------------------KPNQITISSFLPACSILESLRM 387
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++HCY+ + L D+ M L+ MY KCG L +R +F+ + DVV+W+++I+ A
Sbjct: 388 GKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAM 447
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G G E L LF M SG++PN VT GVL+ CSH LVEEGLQ++ M ++ + P
Sbjct: 448 HGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDAN 507
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+C+VD+ +RAGR+HEA +FI +M + W +LL +C+ + NV++ K +A + +I
Sbjct: 508 HYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEI 567
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+P N V L NI ++ W E + MKERG+ K PG SW+++ ++H
Sbjct: 568 EPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHT 620
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+ + G A++LF+ + PD + S+LI + G EA++L+ +R+ G++P+
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 476 HVTLVGVLTACSHVG 490
+ + V AC G
Sbjct: 132 NSVFLTVAKACGASG 146
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/551 (31%), Positives = 286/551 (51%), Gaps = 24/551 (4%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ C++L + +++H IL S D + +++ + C + A F+++ NV
Sbjct: 27 LHKCTNLNQV---KQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNV 83
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+ MI S N Q + A + M + G D FTF +++ C+G + + +HA
Sbjct: 84 HLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQ 143
Query: 207 VIKSEHGSHLISQNALIAMYTKFDR--ILDAWNVFSSI-ARKDITSWGSMIDGFSK---L 260
+ K S + N+LI Y+K I A +F S+ AR+D+ SW SMI G +K
Sbjct: 144 IEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLY 203
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ AR VF+EM + SWNT++ G ++A LF EM +R ++ V A
Sbjct: 204 EEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAG 263
Query: 321 TSPLS--LYQGMQIHSY----IIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
++ L+ M + + II GF + A E LF M + K D
Sbjct: 264 DMEMARMLFDKMPVKNLVSWTIIVSGFAE---------KGLAREAISLFDQMEKACLKLD 314
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
+ T ++ ACA L +G ++H I + N L+DMY KCG L A ++FN
Sbjct: 315 NGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFN 374
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+++ DVVSW++++ G A G G +AL+LF+RM+ G PN VT++GVL AC+H GL+++
Sbjct: 375 DIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDD 434
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G++ + M+ +Y ++P E C+VDLL R GR+ EA I M + ++W +LL +C
Sbjct: 435 GIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGAC 494
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H V++ + +++++++PT+S +L NIYA++G W VA M+ G +K G
Sbjct: 495 RMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSG 554
Query: 615 QSWIEIQTKIH 625
S IE+ ++H
Sbjct: 555 ASSIEVNNEVH 565
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S ++ L EA+ FD ++ ++ T +++AC+ L LG K+H I ++
Sbjct: 286 IVSGFAEKGLAREAISLFDQMEKAC-LKLDNGTVMSILAACAESGLLGLGEKIHASIKNN 344
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + N +++MY KCG L A VF+++ ++VVSW AM+ G + +G A+EL+
Sbjct: 345 NFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELF 404
Query: 170 VQMLQSGLMPDQFTFGSIIRACS 192
+M + G P++ T ++ AC+
Sbjct: 405 KRMKEEGFSPNKVTMIGVLCACT 427
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/588 (32%), Positives = 299/588 (50%), Gaps = 71/588 (12%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSK-------CQPDAV-LHNHILNMYGKCGSLEDARMV 137
L++ C R+L LG +H I+ Q +A+ + N +L+MY KCG +A V
Sbjct: 40 LLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNV 99
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FD MP R+ VSW MI+G +NG + + + + QM +S + +F ++ SG C
Sbjct: 100 FDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSG--CD 157
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
GL + V + HG + F+R + N ITS+ + F
Sbjct: 158 GLRLGISTSVTQMIHG---------LVFVGGFEREITVGNAL-------ITSYFK-CECF 200
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR---ELIPDGLTVR 314
S+ R VF+EM N+ +W +I+G+A +++ LF++M R + P+ LT
Sbjct: 201 SQ---GRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQM--RCCGSVSPNVLTYL 255
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------------- 353
S L AC+ L G +IH + K G S++ + +A++
Sbjct: 256 SSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEEL 315
Query: 354 ------------HQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
Q G E ++F+ M+A + D + V+G L +G Q+H
Sbjct: 316 DGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIH 375
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
I+K + FV NGL++MY KCG L + +F M + VSW+S+I +A+ G G
Sbjct: 376 SLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGF 435
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+AL+ + MR GV P VT + +L ACSH GLVE+G++L M N++GI P E +CV
Sbjct: 436 KALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACV 495
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VD+L RAG ++EA+ FI + ++VW++LL +C HG+ ++GK AA+ + P +
Sbjct: 496 VDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASP 555
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
A VL+ NIY+S G W+E A + MKE GV K G SWIEI+ K+++
Sbjct: 556 APYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGISWIEIEKKVNS 603
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 292/587 (49%), Gaps = 93/587 (15%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ P + ++ S+ +LG +H I + +A + +++ Y CG ++ AR
Sbjct: 136 ELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVARE 195
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD + +++VSWT M+ ++N A++L+ QM G P+ FTF S+ +AC GL
Sbjct: 196 VFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEA 255
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+G+ +H +KS + L AL+ +YTK I
Sbjct: 256 FDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDI------------------------ 291
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
D AR F E+ ++ W+ +IA A + EA+ +F +M ++P+ T S+
Sbjct: 292 ----DDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASV 347
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-------------------- 356
L AC + L G QIH ++IK G +S+V V NA++ A
Sbjct: 348 LQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRND 407
Query: 357 ----------------GE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
GE RLF ML + + +T++ + ACA++A+LE G Q+H
Sbjct: 408 VTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHS 467
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+KT D+ V N L+DMY KCGS+ AR +F+ M D VSW+++I GY+ G
Sbjct: 468 LTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG---- 523
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AC++ GL+++G + M ++GI P E +C+V
Sbjct: 524 ------------------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMV 559
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
LL R G + +A I+++ F ++VW++LL +C H ++++G+ +A+++L+++P + A
Sbjct: 560 WLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKA 619
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL N+YA++ +W+ VA + +MK +GV+K PG SWIE Q +H+
Sbjct: 620 THVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHS 666
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 240/517 (46%), Gaps = 45/517 (8%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
+F+ + + YA+ + C G+ +H IL D N +LNMY K
Sbjct: 26 EFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVK 85
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI 187
L DA +FDEMP+RN +S+ +I G +++ + AIEL+V++ + G + F F +I
Sbjct: 86 SDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTI 145
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
++ + C LG +HA + K H S+ ALI Y+ R+ A VF I KD+
Sbjct: 146 LKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDM 205
Query: 248 TSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
SW M+ F++ D A +F++M N A V EA +
Sbjct: 206 VSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDV------- 258
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-------FYSNVPVCNAI------ 351
G +V L LY G+ + K G + +P + I
Sbjct: 259 -----GKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMI 313
Query: 352 ----LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
Q+ E +F M + P+ TF V+ ACA M L +G Q+HC+++K GL
Sbjct: 314 ARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLH 373
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDP---DVVSWSSLIVGYAQFGCGEEALKLF 464
DVFV N LMD+Y KCG + ++ L F E P DV W+++IVG+ Q G GE+AL+LF
Sbjct: 374 SDVFVSNALMDVYAKCGRMENSMXL--FAESPHRNDVTPWNTVIVGHVQLGDGEKALRLF 431
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVDL 521
M V+ VT L AC+ + +E GLQ++ + + I+ T + ++D+
Sbjct: 432 LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVT----NALIDM 487
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A+ G + +A + M D+ V W ++++ HG
Sbjct: 488 YAKCGSIKDARLVFDLMNKQDE-VSWNAMISGYSMHG 523
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 215/444 (48%), Gaps = 49/444 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ +C +D A EV D L + W + + + + + EAL F ++ F+
Sbjct: 182 DAYSVCGRVDVAREVFDGILYKDMVSWT-GMVTCFAENDCFKEALKLFSQMRM-VGFKPN 239
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+A + AC L + +G+ VH L S+ + D + +L++Y K G ++DAR F+
Sbjct: 240 NFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFE 299
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E+P+++V+ W+ MIA +Q+ Q A+E++ QM Q+ ++P+QFTF S+++AC+ + + L
Sbjct: 300 EIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNL 359
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS-SIARKDITSWGSMIDGFS 258
G Q+H HVIK S + NAL+ +Y K R+ ++ +F+ S R D+T
Sbjct: 360 GNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVT---------- 409
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
WNT+I G + +A+ LF M + + +T S L
Sbjct: 410 ------------------PWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 451
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKP 373
AC S +L G+QIHS +K F ++ V NA++ A + +F LM K
Sbjct: 452 ACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLM----NKQ 507
Query: 374 DHITFNDVMG-------ACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGS 425
D +++N ++ ACA L+ G I G+ + ++ + + G
Sbjct: 508 DEVSWNAMISGYSMHGLACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGH 567
Query: 426 LGSARELFNFME-DPDVVSWSSLI 448
L A +L + + P V+ W +L+
Sbjct: 568 LDKAVKLIDEIPFQPSVMVWRALL 591
>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
Length = 709
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 318/613 (51%), Gaps = 35/613 (5%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFL------QNN 73
A+ C LL +A ++D RR D L S+ C+ +AL AF D L +
Sbjct: 71 AYLQCGLLSRALRLLDEMPRR-DAATYAPLISAHCRLGAPLDALRAFLDMLAWGCSDEEG 129
Query: 74 TNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
+ +RP+ T A ++ AC R +L R VH ++++ D + ++NMY K G +
Sbjct: 130 VDDVVRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDV 189
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
AR + +P R+VVSWTA+++GC N A+ +++ ML+ G++P+ T S+I+AC
Sbjct: 190 ASARRLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNNVTMLSVIQAC 249
Query: 192 SGLCCVGLGRQLHAHVI--KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
+ + L +HA V+ + EH + ++ N+LI MY K + +A +F K S
Sbjct: 250 ALMGASELFGPVHALVVLLELEHDASVV--NSLIMMYAKNGFVEEAIRLFKGFYLK-TGS 306
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV-ASCSNANEAMSLFSEMGDRELIP 308
S D + + + T+ +++ +TI G S S N M +++ E I
Sbjct: 307 VCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARF---EQID 363
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLA 368
L V ++GM++ + S + + + ++A ++F +
Sbjct: 364 AALLV-------------FEGMEVKDIVSWNTIISCLAKTDRV--NEAMDIFSVLHAAAG 408
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
PD +T ++ AC+ L G LH Y+MK+G DV + N L+ MY K G +
Sbjct: 409 GGLAPDFVTVLSMLQACSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDF 468
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV-RPNHVTLVGVLTACS 487
A +F M+ D+VSW+S+I Y G G AL++F +++ +G PN +T V V++ACS
Sbjct: 469 AEMIFERMDIKDLVSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACS 528
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GLV EG + + M ++GI P+ + +CVVDLL R+GR EAE FI M D +W
Sbjct: 529 HSGLVSEGHKCFESMGRDHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVRPDSTIW 588
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
LLA+C+ HGNVD+ ++AA+ + ++P + V L N YAS G+W + A++ M+
Sbjct: 589 GPLLAACQLHGNVDLAEKAAKELSALEPESDIWRVSLSNTYASVGRWRDAAKIRSEMRRV 648
Query: 608 GVRKVPGQSWIEI 620
G+RK G S++++
Sbjct: 649 GLRKETGWSFVDV 661
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 304/589 (51%), Gaps = 22/589 (3%)
Query: 55 CKQN-LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
C QN Y E L+ F + + + TY ++ C +L +++ G + IL S
Sbjct: 235 CSQNGQYEEGLLVFRKM-DLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCS 293
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+L ++++YG+CG L+ A+ + + M QR+VV+W AM+ C+QNG AI L +M
Sbjct: 294 STLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMD 353
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS-QNALIAMYTKFDRI 232
G ++ T+ S++ AC+ L + GR++HA V+ ++ N++I MY K +
Sbjct: 354 MEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQT 413
Query: 233 LDAWNVFSSIARKDITSWGSMID---GFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
A +VF ++ RKD SW ++I+ G SK A +F+ ME L S + +
Sbjct: 414 EAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473
Query: 290 NANEAMSLFSEMGDRELIPD--------GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
E + L ++ R G +V ++ C S L + + +KG
Sbjct: 474 GGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGS---LLDAKKAFDSLEEKGL 530
Query: 342 YSNVPVCNAILQHQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+ + A Q + G F+ F M A KP +TF + ACAAMA+LE G +H
Sbjct: 531 VAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMH 590
Query: 399 CYIMKTGLALDVFVM-NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
+G V+ N +++MY KCGS A+ +F+ M + ++SW+SLIV YA G
Sbjct: 591 RRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHA 650
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
EAL + M G P+ T V +L SH GL+E G++ +R ++G+ P+ + C
Sbjct: 651 LEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKC 710
Query: 518 VVDLLARAGRVHEAEDFI-NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
+VDLLAR G + AE+ I A D + W +LLA+CK++G+ G R AE + +++P
Sbjct: 711 LVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQ 770
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+S + V+L N+YAS G+W + +R+ M+ V+K PG SWIE+ +H
Sbjct: 771 HSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVH 819
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/560 (25%), Positives = 274/560 (48%), Gaps = 29/560 (5%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P+ T+ ++ C+ LR L LGRK+H I++ +PD +L N +++MYG CGS +D +
Sbjct: 155 VKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMK 214
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VF M Q +V+ WT MIAGCSQNGQ + ++ +M G+ ++ T+ S++ C L
Sbjct: 215 SVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLD 274
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI- 254
V G + A +++S S + +LI++Y + + A + + ++D+ +W +M+
Sbjct: 275 AVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVT 334
Query: 255 ------DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
D + + R + E N ++ +++ +C+N EA+S E+ R L+
Sbjct: 335 ACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVL---EACANL-EALSQGREIHARVLLC 390
Query: 309 DGLTVRSLLCACTSPLSLY-------QGMQIHSYIIKKGFYSNVPVCNA-ILQHQAGELF 360
GL R + S +++Y M + + +K S V NA + + +
Sbjct: 391 -GLLQREVAVG-NSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDAL 448
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDM 419
LF M + + T ++ AC + L++ Q+H G + V N +++M
Sbjct: 449 ELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNM 508
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF--GCGEEALKLFRRMRSSGVRPNHV 477
Y +CGSL A++ F+ +E+ +V+WS ++ YAQ G G A K F+ M + G++P V
Sbjct: 509 YARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEV 568
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T V L AC+ + +E G ++R + + + ++++ + G +A+ +Q
Sbjct: 569 TFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQ 628
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL--KIDPTNSAALVLLCNIYASSGKWE 595
M + ++ W SL+ + +G+ + + +L DP + ++ +L + +
Sbjct: 629 MP-EKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLER 687
Query: 596 EVARLMGSMKERGVRKVPGQ 615
V S+++ G+ GQ
Sbjct: 688 GVEHFRSSIQDHGLEPSSGQ 707
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 158/543 (29%), Positives = 262/543 (48%), Gaps = 35/543 (6%)
Query: 35 VDSFLRRFDDIWDFDLFS------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
V L FD I ++FS + + Y EAL F +Q RP +I+
Sbjct: 8 VTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGT---RPDKVVFVIA 64
Query: 89 --ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
AC++ L GR++H ++ S + ++ N ++NMYGKC + A VFD M R+V
Sbjct: 65 LDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDV 124
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSWTAM+A +QNG + A+E +M G+ P+Q TF +I+ C+ L + LGR++H
Sbjct: 125 VSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHR 184
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFA 263
+I I NAL+ MY D +VFS + + + W +MI G S + +
Sbjct: 185 IINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEG 244
Query: 264 RTVFNEMESPNL-ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
VF +M+ + A+ T ++ V C N + EM D ++ +LL TS
Sbjct: 245 LLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKE--GEMIDARILESPFCSSTLL--ATS 300
Query: 323 PLSLYQGMQI---HSYIIKKGFYSNVPVCNAILQ--HQAG---ELFRLFSLMLASQTKPD 374
+SLY I +++ + +V NA++ Q G E L M +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTG-LALDVFVMNGLMDMYVKCGSLGSARELF 433
+T+ V+ ACA + +L G ++H ++ G L +V V N ++ MY KCG +A +F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420
Query: 434 NFMEDPDVVSWSSLI---VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
M D VSW+++I VG ++F ++AL+LF M G+R N TL+ +L AC +
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKF---QDALELFHGMELEGLRSNEFTLLSLLEACGGLE 477
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
++ Q++ + + VV++ AR G + +A+ + + + +V W +
Sbjct: 478 DLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLE-EKGLVAWSII 536
Query: 551 LAS 553
LA+
Sbjct: 537 LAA 539
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 222/469 (47%), Gaps = 38/469 (8%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MYGKC + DA MVFD + +NV SWT M+A SQNG A+EL+ +M G PD+
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F + AC+ + GRQ+H+ V+ S S++I N+L+ MY K + A VF +
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 244 RKDITSWGSMIDGFSK-------LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+D+ SW +M+ +++ L+ + E PN ++ TI+ A +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 297 LFSEMGDRELIPDGLTVRSLL-----CACTSPL-SLYQGMQIHSYIIKKGFYSNVPVCNA 350
+ + + L PDG+ +L+ C + S++ M S ++ + + + C+
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLL---WTTMIAGCSQ 237
Query: 351 ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
Q++ G L +F M K + +T+ ++ C + +++ G + I+++
Sbjct: 238 NGQYEEGLL--VFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSST 295
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+ L+ +Y +CG L A+ L M DVV+W++++ AQ G EA+ L RRM
Sbjct: 296 LLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDME 355
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYR------IMQNEYGIIPTRERRSCVVDLLAR 524
G N VT + VL AC+++ + +G +++ ++Q E + + V+ + +
Sbjct: 356 GFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAV------GNSVITMYGK 409
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
G+ A M DD V W +++ N VG ++ L++
Sbjct: 410 CGQTEAAMSVFEAMPRKDD-VSWNAVI-------NASVGNSKFQDALEL 450
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 296/598 (49%), Gaps = 73/598 (12%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
E + +D L + FR ++ + AC+ L+ L G+K+H ++ + VL +
Sbjct: 125 EVVKLYDLLMKH-GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-L 182
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
L+MY KCG ++ A VF+++ RNVV WT+MIAG +N + L+ +M ++ ++ ++
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVF 239
+T+G++I AC+ L + G+ H ++KS E S L++ +L+ MY K I +A
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT--SLLDMYVKCGDISNA---- 296
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
R VFNE +L W +I G + NEA+SLF
Sbjct: 297 ------------------------RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-- 357
+M E+ P+ +T+ S+L C +L G +H IK G + + V NA++ A
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCY 391
Query: 358 ----------------------------------ELFRLFSLMLASQTKPDHITFNDVMG 383
E LF M + P+ +T +
Sbjct: 392 QNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFS 451
Query: 384 ACAAMASLEMGTQLHCYIMKTGL--ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
ACA++ SL +G+ LH Y +K G + V V L+D Y KCG SAR +F+ +E+ +
Sbjct: 452 ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
++WS++I GY + G +L+LF M +PN T +L+AC H G+V EG + +
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M +Y P+ + +C+VD+LARAG + +A D I +M D+ + + L C H D
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFD 631
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+G+ + +L + P +++ VL+ N+YAS G+W + + MK+RG+ K+ G S +E
Sbjct: 632 LGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 230/525 (43%), Gaps = 73/525 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+S C+++ SL R+ H + + D + ++++YG G +DAR+VFD++P+ +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
W M+ N + ++LY +++ G D F ++AC+ L + G+++H
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++K +++ L+ MY K I A VF+ I +++ W SMI G+ K D
Sbjct: 167 QLVKVPSFDNVV-LTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE- 224
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
E + LF+ M + ++ + T +L+ ACT +
Sbjct: 225 ---------------------------EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSA 257
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QH-------------- 354
L+QG H ++K G + + ++L +H
Sbjct: 258 LHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 317
Query: 355 -----QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
E LF M + KP+ +T V+ C + +LE+G +H +K G+ D
Sbjct: 318 YTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WD 376
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V N L+ MY KC A+ +F + D+V+W+S+I G++Q G EAL LF RM S
Sbjct: 377 TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS 436
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR--SCVVDLLARAGR 527
V PN VT+ + +AC+ +G + G L+ + G + + + ++D A+ G
Sbjct: 437 ESVTPNGVTVASLFSACASLGSLAVGSSLHA-YSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
A + + + + + W +++ G+ E +LK
Sbjct: 496 PQSARLIFDTIE-EKNTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 271/517 (52%), Gaps = 48/517 (9%)
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI---IRACSGLCCVGLGRQLH 204
SW I + GQ AI L++QM ++ + P S+ +++C+GL L LH
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
A I+S + + NAL+ + K + + S + + R
Sbjct: 73 ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLES--------AAYESMR 124
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF+EM + SWNT+I G A EA+S+ EM +PD T+ ++L
Sbjct: 125 KVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECA 184
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV--------------------------CNAILQHQ--A 356
+ +GM +H Y IK GF ++V V C+A+L + A
Sbjct: 185 DIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLA 244
Query: 357 G--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
G E +F ML + +P +TF+ ++ A ++ L +G QLH Y+++
Sbjct: 245 GYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFND 304
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++F+ + L+DMY KCG++ AR +FN ++ PD+VSW+++I+GYA G EA LF RM
Sbjct: 305 NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERME 364
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
V+PNH+T + VLTACSH GLV+ G + + M N+YG +P+ E + + D L RAG +
Sbjct: 365 LGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDL 424
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA +FI++M VW +LL +C+ H N + + A+ I +++P + + V+L N+Y
Sbjct: 425 DEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMY 484
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++SG+W E A+L SM+ +G++K P SWIE++ K+H
Sbjct: 485 SASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLH 521
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 146/308 (47%), Gaps = 34/308 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST + + C+ ++ G VH + + + D + + +++MY C ++ + VFD
Sbjct: 174 STVLPIFAECADIKR---GMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ V W +M+AG +QNG A+ ++ +MLQ+G+ P TF S+I A L + LG
Sbjct: 231 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+QLHA++I++ ++ ++LI MY K + A VF+ I DI SW +MI G++
Sbjct: 291 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYA-- 348
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ P EA LF M + P+ +T ++L AC
Sbjct: 349 ---------LHGPT-----------------TEAFVLFERMELGNVKPNHITFLAVLTAC 382
Query: 321 TSPLSLYQGMQ-IHSYIIKKGFYSNVPVCNAILQH--QAGELFRLFSLMLASQTKPDHIT 377
+ + G + +S + GF ++ C A+ +AG+L ++ + + KP
Sbjct: 383 SHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSV 442
Query: 378 FNDVMGAC 385
++ ++ AC
Sbjct: 443 WSTLLRAC 450
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 146/293 (49%), Gaps = 16/293 (5%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D + +V DSF +W+ + + + EAL F + R
Sbjct: 213 DMYANCTQMDYSMKVFDSFSDCDAVLWN-SMLAGYAQNGSVEEALGIFRRMLQ-AGVRPV 270
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P T++ LI A +L L+LG+++H +++ ++ + + + +++MY KCG+++ AR VF+
Sbjct: 271 PVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFN 330
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ ++VSWTAMI G + +G A L+ +M + P+ TF +++ ACS V
Sbjct: 331 GIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDN 390
Query: 200 GRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMI-- 254
G + + + + +++G L AL + + +A+N S + K +S W +++
Sbjct: 391 GWK-YFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA 449
Query: 255 -----DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA-NEAMSLFSEM 301
+ + A+ +F E+E ++ S + I++ + S S NEA L M
Sbjct: 450 CRVHKNTVLAEEVAKKIF-ELEPKSMGS-HVILSNMYSASGRWNEAAQLRKSM 500
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 281/533 (52%), Gaps = 36/533 (6%)
Query: 100 RKVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
+K+H I + + L ++ Y CG R +FDE+P++NVV + MI
Sbjct: 55 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
N + A+ ++ M G+ PD +T+ +++A SG + +G Q+HA V++ ++
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 174
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N LI+MY K +++A V + +D+ S W
Sbjct: 175 GNGLISMYGKCGCLVEACRVLDQMPCRDVVS----------------------------W 206
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA----CTSPLSLYQGMQIHS 334
N+++AG A ++A+ + EM L PD T+ SLL A C +S + M +
Sbjct: 207 NSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMK- 265
Query: 335 YIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+ K S NV + + E +F M PD I+ V+ AC +++L +
Sbjct: 266 -LANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLL 324
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++H Y+++ L ++ + N L+DMY KCG L ARE+F+ M+ DVVSW+S+I Y
Sbjct: 325 GRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGM 384
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G G +A+ LF RM+ G+ P+ + V VL+ACSH GL++EG +++M E I+P E
Sbjct: 385 NGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIE 444
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
C+VDLL RAG+V EA FI QM + + VW +LL++C+ + N+ +G AA+ + ++
Sbjct: 445 HFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQL 504
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
P S VLL NIYA +G+WE+V + MK +G++K+PG S E+ ++H
Sbjct: 505 CPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHT 557
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 183/396 (46%), Gaps = 60/396 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
+ S +LY++AL+ F +N I P TY ++ A S L +G ++H ++
Sbjct: 108 MIRSYVNNHLYSDALLVF---KNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVV 164
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ + N +++MYGKCG L +A V D+MP R+VVSW +++AGC++NGQ + A+E
Sbjct: 165 RVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALE 224
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCC--VGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ +M GL PD T S++ A + C V +++ + L+S N +IA+
Sbjct: 225 VCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS----LVSWNVMIAV 280
Query: 226 YTKFDRILDAWNVF-----------------------------------SSIARKDITS- 249
Y +A ++F + RK +
Sbjct: 281 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 340
Query: 250 ---WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
++ID ++K L++AR VF++M+ ++ SW ++I+ +A+SLFS M D
Sbjct: 341 LLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQD 400
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGE 358
L PD + S+L AC+ L +G + ++ VP VC L +AG+
Sbjct: 401 LGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEEC--KIVPRIEHFVCMVDLLGRAGQ 458
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ + + +P+ + ++ AC +++ +G
Sbjct: 459 VDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIG 494
>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 277/563 (49%), Gaps = 63/563 (11%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G+ +H +++ + + +L I+ MY KC +EDA V + P+ +V WT++I+G Q
Sbjct: 238 GKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQ 297
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
N Q A+ V M SG++P+ FT+ S++ A S + + LG Q H+ VI +
Sbjct: 298 NSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYV 357
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
NAL+ MY K + +G F + PN+ SW
Sbjct: 358 GNALVDMYMKCSH--------------------TTTNGVK-------AFRGIALPNVISW 390
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
++IAG A E++ LF+EM + P+ T+ ++L AC+ S+ Q ++H YIIK
Sbjct: 391 TSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIK 450
Query: 339 KGFYSNVPVCNAILQHQAGE------------------------------------LFRL 362
++ V NA++ AG R+
Sbjct: 451 TQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRV 510
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
+ M + K D + + A A + +E G QLHCY K+G V N L+ Y K
Sbjct: 511 ITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSK 570
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ A +F + +PD VSW+ LI G A G +AL F MR +GV+P+ VT + +
Sbjct: 571 CGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSL 630
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
+ ACS L+ +GL + M+ Y I P + C+VDLL R GR+ EA I M F
Sbjct: 631 IFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKP 690
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D V++K+LL +C HGNV +G+ A L++DP + A +LL ++Y ++G + +
Sbjct: 691 DSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRK 750
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
M+ERG+R+ P Q W+E+++KI+
Sbjct: 751 LMRERGLRRSPRQCWMEVKSKIY 773
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 259/545 (47%), Gaps = 77/545 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++S C+S ++L+ G VH I+ Q D L N++L +Y KC + AR +FDEM
Sbjct: 19 TCLQVLSLCNS-QTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEM 77
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+VVSWT +++ ++N A++L+ ML SG P++FT S +R+CS L G
Sbjct: 78 PHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGA 137
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++HA V+K + + L+ +YTK D ++ + + + D+
Sbjct: 138 KIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVV------------- 184
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
SW T+I+ + S +EA+ L+ +M + + P+ T LL
Sbjct: 185 ---------------SWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLL-GMP 228
Query: 322 SPLSLYQGMQ--IHSYIIKKGFYSNVPVCNAIL--------------------------- 352
S L L +G +HS +I G N+ + AI+
Sbjct: 229 SFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLW 288
Query: 353 ---------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q E M S P++ T+ ++ A +++ SLE+G Q H ++
Sbjct: 289 TSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIM 348
Query: 404 TGLALDVFVMNGLMDMYVKCG-SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
GL D++V N L+DMY+KC + + + F + P+V+SW+SLI G+A+ G EE+++
Sbjct: 349 VGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQ 408
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDL 521
LF M+++GV+PN TL +L ACS + + + +L+ I++ + I + +VD
Sbjct: 409 LFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDI--DMAVGNALVDA 466
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI----LKIDPTN 577
A G EA I M DI+ + +L A G+ ++ R ++ +K+D +
Sbjct: 467 YAGGGMADEAWSVIGMMN-HRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFS 525
Query: 578 SAALV 582
A+ +
Sbjct: 526 LASFI 530
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 149/611 (24%), Positives = 269/611 (44%), Gaps = 82/611 (13%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFL----QNNTNFR 77
+ C + QA + D R W L S+ + + EAL FD + Q F
Sbjct: 61 YAKCFGVGQARHLFDEMPHRDVVSWT-TLLSAHTRNKHHFEALQLFDMMLGSGQCPNEF- 118
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
T + + +CS+L + G K+H ++ + + VL ++++Y KC + +
Sbjct: 119 ----TLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKL 174
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL-CC 196
+ +VVSWT MI+ + + + A++LYV+M+++G+ P++FTF ++ S L
Sbjct: 175 LAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLG 234
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G G+ LH+ +I +L+ + A+I MY K R+ DA V + D+ W S+I G
Sbjct: 235 KGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISG 294
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F S EA++ +M ++P+ T SL
Sbjct: 295 F----------------------------VQNSQVREAVNALVDMELSGILPNNFTYASL 326
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ--------------------- 355
L A +S LSL G Q HS +I G ++ V NA++
Sbjct: 327 LNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPN 386
Query: 356 --------AG--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
AG E +LF+ M A+ +P+ T + ++GAC+ M S+ +LH
Sbjct: 387 VISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHG 446
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
YI+KT + +D+ V N L+D Y G A + M D++++++L Q G E
Sbjct: 447 YIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEM 506
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL++ M + V+ + +L ++A + +G++E G QL+ + G + +V
Sbjct: 507 ALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLH-CYSFKSGFERCNSVSNSLV 565
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI----LKIDP 575
++ G + +A + + D V W L++ ++G + A +++ +K D
Sbjct: 566 HSYSKCGSMRDAYRVFKDIT-EPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDS 624
Query: 576 TNSAALVLLCN 586
+L+ C+
Sbjct: 625 VTFLSLIFACS 635
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 151/326 (46%), Gaps = 35/326 (10%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P+++ + ++ ACS ++S+ +K+H +I+ ++ D + N +++ Y G ++A
Sbjct: 418 VQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAW 477
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
V M R+++++T + A +Q G A+ + M + D+F+ S I A +GL
Sbjct: 478 SVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLG 537
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ G+QLH + KS N+L+ Y+K + DA+ VF I D S
Sbjct: 538 IMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVS------ 591
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
WN +I+G+AS ++A+S F +M + PD +T S
Sbjct: 592 ----------------------WNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLS 629
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP----VCNAILQHQAGELFRLFSLMLASQT 371
L+ AC+ L QG+ + Y ++K ++ VC L + G L ++
Sbjct: 630 LIFACSQGSLLNQGLD-YFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPF 688
Query: 372 KPDHITFNDVMGACAAMASLEMGTQL 397
KPD + + ++ AC ++ +G +
Sbjct: 689 KPDSVIYKTLLNACNLHGNVPLGEDM 714
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ + D+A V+ R D I L + L +Q + AL + N+ ++
Sbjct: 465 DAYAGGGMADEAWSVIGMMNHR-DIITYTTLAARLNQQGDHEMALRVITHMCND-EVKMD 522
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+ A ISA + L ++ G+++H + S + + N +++ Y KCGS+ DA VF
Sbjct: 523 EFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFK 582
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
++ + + VSW +I+G + NG + A+ + M +G+ PD TF S+I ACS
Sbjct: 583 DITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACS 635
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 325/641 (50%), Gaps = 68/641 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTY 83
C LD+A E+ D + W+ L + + EA AF L++ +T
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWN-SLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATM 316
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
L+ CS ++ +G +H + + ++ N +++MY KCG L +A ++F ++
Sbjct: 317 VTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN 376
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMP-DQFTFGSIIRACSGLCCVGLGR 201
++VVSW +MI S+ G +L +M ++ LM ++ T +++ AC + R
Sbjct: 377 KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLR 436
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH + ++ + NA IA Y K GS++
Sbjct: 437 ALHGYSLRHSFQYKELINNAFIAAYAK---------------------CGSLV------- 468
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
FA VF M + +++SWN +I G A + +A+ + EM ++PD ++ SLL AC
Sbjct: 469 FAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACG 528
Query: 322 SPLSLYQGMQIHSYIIKKG---------------FYSNVP---------------VC-NA 350
L G +IH ++++ G F+ + P VC NA
Sbjct: 529 RLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNA 588
Query: 351 ILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L + E LF ML+ +PD I ++GAC+ +++L +G ++HC+ +K
Sbjct: 589 MLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNS 648
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L D FV LMDMY K G LG ++ +FN + +V SW+ +I G+ G G +A++LF
Sbjct: 649 LMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFE 708
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M+ S +P+ T +GVL AC H GLV EGL MQ Y + P E +CV+D+L RA
Sbjct: 709 DMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRA 768
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
GR++EA +FIN+M + D +W SLL+S T+ ++++G++ AE +L ++ + + +LL
Sbjct: 769 GRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLS 828
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N+YA++GKW+ V + MK+ ++K G SWIE++ K+++
Sbjct: 829 NLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYS 869
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 150/562 (26%), Positives = 265/562 (47%), Gaps = 57/562 (10%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD + + +LF S + LY+EA+ F L + T F+ T+ LI AC+
Sbjct: 166 FDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCD 225
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+ LG+ VH + D + N ++ +YGKCG L++A +FD+MP++N++SW ++I G
Sbjct: 226 IHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG 285
Query: 156 CSQNGQENAAIELYVQMLQS--GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
S+NG A + +L+S GL+PD T +++ CSG V +G +H +K
Sbjct: 286 FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLV 345
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES- 272
L+ NALI MY+K + +A +F I K + SW SMI +S+ F F+ +
Sbjct: 346 HELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM 405
Query: 273 ---PNLASWN--TIIAGVASCSNANEAMSLFSEMG--------DRELIPDGLTVRSLLC- 318
L N TI+ + +C +E +SL + G +ELI + C
Sbjct: 406 WMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCG 465
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--QHQAGELFRLFSL---MLASQTKP 373
+ ++ GM S V NA++ Q G+ + M P
Sbjct: 466 SLVFAEHVFFGMNTKS----------VSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILP 515
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D + ++ AC + L+ G ++H ++++ GL ++ FV L+ +Y C R F
Sbjct: 516 DDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYF 575
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
M D + V W++++ GY+Q EAL LFR+M S G+ P+ + + +L ACS + +
Sbjct: 576 ERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALG 635
Query: 494 EGLQLY------RIMQNEYGIIPTRERRSC-VVDLLARAGRVHEAEDFINQMAFDDDIVV 546
G +++ +M++ + +C ++D+ A++G + ++ N++ ++
Sbjct: 636 LGKEVHCFALKNSLMEDNF--------VACSLMDMYAKSGFLGHSQRIFNRLN-GKEVAS 686
Query: 547 WKSLLASCKTHGNVDVGKRAAE 568
W ++ HG G +A E
Sbjct: 687 WNVMITGFGVHGQ---GNKAVE 705
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 228/497 (45%), Gaps = 81/497 (16%)
Query: 52 SSLCKQNLYNEALVAFDFLQ----NNTNFRI--RPSTYADLISACSSLRSLQLGRKVHDH 105
S LC+ N AL DFLQ NN + + R L+ C +++++GRK+ +
Sbjct: 76 SKLCEAGDLNGAL---DFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEM 132
Query: 106 I-LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ +SS+ D VL+ ++ MY CG ++R+VFD + +N+ W A+++G +N +
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192
Query: 165 AIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
AI +++++ + PD FTF +I+AC+G C + LG+ +H +K L NA+I
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMI 252
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
A+Y K GF LD A +F++M NL SWN++I
Sbjct: 253 ALYGKC--------------------------GF--LDEAVELFDKMPEQNLISWNSLIR 284
Query: 284 GVASCSNANEAMSLFS---EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
G + EA F E GD LIPD T+ +LL C+ ++ GM IH +K G
Sbjct: 285 GFSENGFWLEAYRAFRSLLESGDG-LIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLG 343
Query: 341 FYSNVPVCNAILQ---------------------------------HQAGELFRLFSL-- 365
+ VCNA++ + G +F F L
Sbjct: 344 LVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLR 403
Query: 366 ---MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
M + + +T +++ AC + L LH Y ++ + N + Y K
Sbjct: 404 KMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAK 463
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGSL A +F M V SW+++I G+AQ G +AL + M G+ P+ ++V +
Sbjct: 464 CGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSL 523
Query: 483 LTACSHVGLVEEGLQLY 499
L AC +GL++ G +++
Sbjct: 524 LLACGRLGLLQYGKEIH 540
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 325/641 (50%), Gaps = 68/641 (10%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTY 83
C LD+A E+ D + W+ L + + EA AF L++ +T
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWN-SLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATM 316
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
L+ CS ++ +G +H + + ++ N +++MY KCG L +A ++F ++
Sbjct: 317 VTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN 376
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMP-DQFTFGSIIRACSGLCCVGLGR 201
++VVSW +MI S+ G +L +M ++ LM ++ T +++ AC + R
Sbjct: 377 KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLR 436
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
LH + ++ + NA IA Y K GS++
Sbjct: 437 ALHGYSLRHSFQYKELINNAFIAAYAK---------------------CGSLV------- 468
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
FA VF M + +++SWN +I G A + +A+ + EM ++PD ++ SLL AC
Sbjct: 469 FAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACG 528
Query: 322 SPLSLYQGMQIHSYIIKKG---------------FYSNVP---------------VC-NA 350
L G +IH ++++ G F+ + P VC NA
Sbjct: 529 RLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNA 588
Query: 351 ILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+L + E LF ML+ +PD I ++GAC+ +++L +G ++HC+ +K
Sbjct: 589 MLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNS 648
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L D FV LMDMY K G LG ++ +FN + +V SW+ +I G+ G G +A++LF
Sbjct: 649 LMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFE 708
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M+ S +P+ T +GVL AC H GLV EGL MQ Y + P E +CV+D+L RA
Sbjct: 709 DMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRA 768
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
GR++EA +FIN+M + D +W SLL+S T+ ++++G++ AE +L ++ + + +LL
Sbjct: 769 GRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLS 828
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N+YA++GKW+ V + MK+ ++K G SWIE++ K+++
Sbjct: 829 NLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYS 869
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 150/562 (26%), Positives = 265/562 (47%), Gaps = 57/562 (10%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD + + +LF S + LY+EA+ F L + T F+ T+ LI AC+
Sbjct: 166 FDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCD 225
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+ LG+ VH + D + N ++ +YGKCG L++A +FD+MP++N++SW ++I G
Sbjct: 226 IHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG 285
Query: 156 CSQNGQENAAIELYVQMLQS--GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
S+NG A + +L+S GL+PD T +++ CSG V +G +H +K
Sbjct: 286 FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLV 345
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES- 272
L+ NALI MY+K + +A +F I K + SW SMI +S+ F F+ +
Sbjct: 346 HELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM 405
Query: 273 ---PNLASWN--TIIAGVASCSNANEAMSLFSEMG--------DRELIPDGLTVRSLLC- 318
L N TI+ + +C +E +SL + G +ELI + C
Sbjct: 406 WMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCG 465
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--QHQAGELFRLFSL---MLASQTKP 373
+ ++ GM S V NA++ Q G+ + M P
Sbjct: 466 SLVFAEHVFFGMNTKS----------VSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILP 515
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D + ++ AC + L+ G ++H ++++ GL ++ FV L+ +Y C R F
Sbjct: 516 DDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYF 575
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
M D + V W++++ GY+Q EAL LFR+M S G+ P+ + + +L ACS + +
Sbjct: 576 ETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALG 635
Query: 494 EGLQLY------RIMQNEYGIIPTRERRSC-VVDLLARAGRVHEAEDFINQMAFDDDIVV 546
G +++ +M++ + +C ++D+ A++G + ++ N++ ++
Sbjct: 636 LGKEVHCFALKNSLMEDNF--------VACSLMDMYAKSGFLGHSQRIFNRLN-GKEVAS 686
Query: 547 WKSLLASCKTHGNVDVGKRAAE 568
W ++ HG G +A E
Sbjct: 687 WNVMITGFGVHGQ---GNKAVE 705
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 228/497 (45%), Gaps = 81/497 (16%)
Query: 52 SSLCKQNLYNEALVAFDFLQ----NNTNFRI--RPSTYADLISACSSLRSLQLGRKVHDH 105
S LC+ N AL DFLQ NN + + R L+ C +++++GRK+ +
Sbjct: 76 SKLCEAGDLNGAL---DFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEM 132
Query: 106 I-LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ +SS+ D VL+ ++ MY CG ++R+VFD + +N+ W A+++G +N +
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192
Query: 165 AIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
AI +++++ + PD FTF +I+AC+G C + LG+ +H +K L NA+I
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMI 252
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
A+Y K GF LD A +F++M NL SWN++I
Sbjct: 253 ALYGKC--------------------------GF--LDEAVELFDKMPEQNLISWNSLIR 284
Query: 284 GVASCSNANEAMSLFS---EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
G + EA F E GD LIPD T+ +LL C+ ++ GM IH +K G
Sbjct: 285 GFSENGFWLEAYRAFRSLLESGDG-LIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLG 343
Query: 341 FYSNVPVCNAILQ---------------------------------HQAGELFRLFSL-- 365
+ VCNA++ + G +F F L
Sbjct: 344 LVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLR 403
Query: 366 ---MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
M + + +T +++ AC + L LH Y ++ + N + Y K
Sbjct: 404 KMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAK 463
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGSL A +F M V SW+++I G+AQ G +AL + M G+ P+ ++V +
Sbjct: 464 CGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSL 523
Query: 483 LTACSHVGLVEEGLQLY 499
L AC +GL++ G +++
Sbjct: 524 LLACGRLGLLQYGKEIH 540
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 273/530 (51%), Gaps = 77/530 (14%)
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+ NV SW ++IA +++G A+ + M + L P++ TF I++CS L + GRQ
Sbjct: 114 KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 173
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
H + L +AL+ MY+K + DA
Sbjct: 174 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDA--------------------------- 206
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--------GDRELIPDGLTVR 314
RT+F+E+ N+ SW ++I G +A+ A+ LF E GD E+ D + +
Sbjct: 207 -RTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMV 265
Query: 315 SLLCACT--SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL----------- 359
S+L AC+ S S+ +G +H ++IK+GF ++ V N ++ A GEL
Sbjct: 266 SVLSACSRVSEKSITEG--VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMA 323
Query: 360 -----------------------FRLFSLMLA-SQTKPDHITFNDVMGACAAMASLEMGT 395
+F M+ + + +T + V+ ACA S +G
Sbjct: 324 ERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGK 383
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
+H ++K GL +VFV ++DMY KCG + AR+ F+ M + +V SWS+++ GY G
Sbjct: 384 CIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHG 443
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+EAL++F M +GV+PN++T V VL ACSH GL+EEG ++ M +E+ + P E
Sbjct: 444 HAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY 503
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C+VDLL RAG + EA D I M D VVW +LL +C+ H NVD+G+ +A + ++DP
Sbjct: 504 GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDP 563
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N VLL NIYA +G+WE+V R+ MK G+ K PG S ++I+ ++H
Sbjct: 564 KNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVH 613
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 188/438 (42%), Gaps = 84/438 (19%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
EAL AF ++ + + ST+ I +CS+L L GR+ H L +PD + + +
Sbjct: 135 EALRAFSSMRK-LSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSAL 193
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML--QSG--- 176
++MY KCG L DAR +FDE+ RN+VSWT+MI G QN + A+ L+ + L +SG
Sbjct: 194 VDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEG 253
Query: 177 ---LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ D S++ ACS + + +H +IK L +N L+ Y K +
Sbjct: 254 DGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELG 313
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+ VF +A +D+ SWN+IIA A + E
Sbjct: 314 VSRRVFDGMAERDVI----------------------------SWNSIIAVYAQNGMSTE 345
Query: 294 AMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI- 351
+M +F M D E+ + +T+ ++L AC S G IH +IK G SNV V +I
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSII 405
Query: 352 -----------------------------------LQHQAGELFRLFSLMLASQTKPDHI 376
+ A E +F M + KP++I
Sbjct: 406 DMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 465
Query: 377 TFNDVMGACAAMASLEMG-----TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
TF V+ AC+ LE G H + ++ G V ++D+ + G L A +
Sbjct: 466 TFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPG----VEHYGCMVDLLGRAGYLKEAFD 521
Query: 432 LFNFME-DPDVVSWSSLI 448
L M+ PD V W +L+
Sbjct: 522 LIKGMKLRPDFVVWGALL 539
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 48/341 (14%)
Query: 265 TVFNE-MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
T+FN+ ++ N+ SWN++IA +A ++ EA+ FS M L P+ T + +C++
Sbjct: 106 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL---------------------- 359
L L+ G Q H + GF ++ V +A++ + GEL
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225
Query: 360 ------------FRLFSLMLASQTKP--------DHITFNDVMGACAAMASLEMGTQLHC 399
LF L ++ D I V+ AC+ ++ + +H
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
+++K G D+ V N LMD Y KCG LG +R +F+ M + DV+SW+S+I YAQ G E
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345
Query: 460 ALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
++++F RM G + N VTL VL AC+H G G ++ + + G+ + +
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVI-KMGLESNVFVGTSI 404
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+D+ + G+V A ++M + ++ W +++A HG+
Sbjct: 405 IDMYCKCGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMHGH 444
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 200/471 (42%), Gaps = 83/471 (17%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
L+ E LV + + + P ++SACS + + VH ++ + D +
Sbjct: 240 LFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVE 299
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-L 177
N +++ Y KCG L +R VFD M +R+V+SW ++IA +QNG ++E++ +M++ G +
Sbjct: 300 NTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 359
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
+ T +++ AC+ LG+ +H VIK S++ ++I MY K ++ A
Sbjct: 360 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARK 419
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
F + K++ SW +M +AG +A EA+ +
Sbjct: 420 AFDRMREKNVKSWSAM----------------------------VAGYGMHGHAKEALEV 451
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ-----IHSYIIKKGFYSNVPVCNAIL 352
F EM + P+ +T S+L AC+ L +G H + ++ G C L
Sbjct: 452 FYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY--GCMVDL 509
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+AG L F L+ + +PD + + ++GAC ++++G
Sbjct: 510 LGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEI---------------- 553
Query: 413 MNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG-YAQFGCGEEALKLFRRMRSSG 471
SAR+LF DP + L+ YA G E+ ++ M++SG
Sbjct: 554 ---------------SARKLFEL--DPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSG 596
Query: 472 -VRPN-----------HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
V+P HV LVG H + E +L +Q E G +P
Sbjct: 597 LVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQ-EVGYVP 646
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 37/270 (13%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQN-LYNEALVAFDFLQNNTNFRI 78
DA+ C L + V D R D+ ++ ++ QN + E++ F + +
Sbjct: 304 DAYAKCGELGVSRRVFDGMAER--DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 361
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
T + ++ AC+ S +LG+ +HD ++ + + + I++MY KCG +E AR F
Sbjct: 362 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAF 421
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
D M ++NV SW+AM+AG +G A+E++ +M +G+ P+ TF S++ ACS
Sbjct: 422 DRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS------ 475
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
HA ++ E G H AM +FD + +G M+D
Sbjct: 476 -----HAGLL--EEGWHWFK-----AMSHEFD------------VEPGVEHYGCMVDLLG 511
Query: 259 KLDFARTVFNEMES----PNLASWNTIIAG 284
+ + + F+ ++ P+ W ++
Sbjct: 512 RAGYLKEAFDLIKGMKLRPDFVVWGALLGA 541
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 154/357 (43%), Gaps = 49/357 (13%)
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQA 356
FS R I G +R + +L+ Y+ K +S N + +
Sbjct: 79 FSGFSKRRSICAGAVLRRRYSNNPNLTTLFN-----KYVDKTNVFSWNSVIAELARSGDS 133
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E R FS M KP+ TF + +C+A+ L G Q H + G D+FV + L
Sbjct: 134 VEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSAL 193
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR--MRSSG--- 471
+DMY KCG L AR LF+ + ++VSW+S+I GY Q AL LF+ + SG
Sbjct: 194 VDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEG 253
Query: 472 ---VRPNHVTLVGVLTACSHVG--LVEEGLQ---LYRIMQNEYGIIPTR----------- 512
V + + +V VL+ACS V + EG+ + R + + G+ T
Sbjct: 254 DGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELG 313
Query: 513 -ERR-------------SCVVDLLARAGRVHEAEDFINQMAFDDDI----VVWKSLLASC 554
RR + ++ + A+ G E+ + ++M D +I V ++L +C
Sbjct: 314 VSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 373
Query: 555 KTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
G+ +GK + ++K+ +N + ++Y GK E + M+E+ V+
Sbjct: 374 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 430
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 299/542 (55%), Gaps = 20/542 (3%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L LG+ VH ++ + + D V +N+++ +Y KCG L AR VFD MP RN VS +++G
Sbjct: 32 LSLGKAVHARVVRA-ARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+ +G+ A+ L +++ GL +++ S + A + + +GRQ H + IK+ H
Sbjct: 91 YASSGRHRDALAL-LRVADFGL--NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEH 147
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMES 272
+A++ MY + + +A VF +++ ++ ++ SMI+GF ++D + ++ M
Sbjct: 148 PYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVR 207
Query: 273 PNLASWNTI--IAGVASCSNANEAM---SLFSEMGDREL---IPDGLTVRSLLCACTSPL 324
N+ W+ + +A + C++ E + + ++ R L + G + + C P
Sbjct: 208 -NVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP- 265
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE-LFRLFSLMLASQTKPDHITFNDVMG 383
++ ++ + +K S + A Q++ E +LF M +P+ T+ +
Sbjct: 266 --HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALN 323
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+CA +A+L+ G L MKTG + V N LM+MY K GS+ AR +F M DVVS
Sbjct: 324 SCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVS 383
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+S+I+GYA G EA++ F M + P++VT +GVL+AC+ +GLV+EG IM
Sbjct: 384 WNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMM 443
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
E G+ P +E +C+V LL R GR+ EAE FI D+V W+SLL+SC+ + N +G
Sbjct: 444 KEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLG 503
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
R AE I ++ P + VLL N+YA + +W+ V ++ M+E GVRK PG SWI++ ++
Sbjct: 504 HRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSE 563
Query: 624 IH 625
+H
Sbjct: 564 VH 565
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 54/322 (16%)
Query: 12 PRWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAF-DFL 70
P C + C +D+A +V FD++ F++F+ +N + F D
Sbjct: 148 PYVCSAVLHMYCQCAHMDEAVKV-------FDNVSSFNVFA-------FNSMINGFLDRG 193
Query: 71 QNNTNFRIRPS-----------TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
Q + + I S +Y ++ C+S + + LG +VH L + + + + +
Sbjct: 194 QMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGS 253
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+++MYGKC +A VF+ +P++N+VSWTA++ +QN A++L++ M G+ P
Sbjct: 254 ALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRP 313
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
++FT+ + +C+GL + G L A +K+ H L NAL+ MY+K + DA VF
Sbjct: 314 NEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVF 373
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
S+ +D+ SW N+II G A A EAM F
Sbjct: 374 LSMPCRDVVSW----------------------------NSIIIGYAHHGRAREAMEAFH 405
Query: 300 EMGDRELIPDGLTVRSLLCACT 321
+M E +P +T +L AC
Sbjct: 406 DMLFAEEVPSYVTFIGVLSACA 427
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 184/443 (41%), Gaps = 75/443 (16%)
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
+F + + ++A + +RS +GR+ H + + + + + +L+MY +C +++
Sbjct: 107 ADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDE 166
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A VFD + NV ++ +MI G GQ + + + M+++ D ++ +++ C+
Sbjct: 167 AVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCAS 226
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
V LG Q+H +K ++ +AL+ MY K D +A VF + K+I SW ++
Sbjct: 227 TKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAI 286
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ +++ NE+ +A+ LF +M + P+ T
Sbjct: 287 MTAYTQ--------NEL--------------------FEDALQLFLDMEMEGVRPNEFTY 318
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------- 352
L +C +L G + + +K G + +PVCNA++
Sbjct: 319 AVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPC 378
Query: 353 ---------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG-TQ 396
+A E F ML ++ P ++TF V+ ACA + ++ G
Sbjct: 379 RDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYY 438
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED----PDVVSWSSLIVG-- 450
L+ + + G+ ++ + + G L A F+E DVV+W SL+
Sbjct: 439 LNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAER---FIESNCIGTDVVAWRSLLSSCQ 495
Query: 451 -YAQFGCGEEALKLFRRMRSSGV 472
Y +G G + +++ V
Sbjct: 496 VYRNYGLGHRVAEQIFQLKPKDV 518
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 309/589 (52%), Gaps = 51/589 (8%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHIL 107
L S CK E L F + ++ +PS Y ++ ACS+L L G+ +H + +
Sbjct: 105 LVSGYCKNGCEVEGLRQFSQMWSDGQ---KPSQYTLGSVLRACSTLSLLHTGKMIHCYAI 161
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR-NVVSWTAMIAGCSQNGQENAAI 166
+ + + + +++MY KC L +A +F +P R N V WTAM+ G +QNG+ AI
Sbjct: 162 KIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAI 221
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ + +M G+ + FTF SI+ AC+ + GRQ+H +I S G ++ Q+AL+ MY
Sbjct: 222 QCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMY 281
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
K D+ S AR + + ME ++ WN++I G
Sbjct: 282 AKCG---------------DLAS-------------ARMILDTMEIDDVVCWNSMIVGCV 313
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+ EA+ LF +M +R++ D T S+L + S +L G +HS IK GF +
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKT 373
Query: 347 VCNAILQHQAGE-----LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
V NA++ A + +F+ +L D I++ ++ E QL C +
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKIL----DKDVISWTSLVTGYVHNGFHEKALQLFCDM 429
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPD---VVSWSSLIVGYAQFGCG 457
+ LD FV+ + + + R++ NF++ + + +SLI YA+ GC
Sbjct: 430 RTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL 489
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E+A+++ M + V ++ ++ + GLVE G + M+ YGI P +R +C
Sbjct: 490 EDAIRVXDSMETRNV----ISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYAC 545
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++DLL RAG+++EAE +N+M + D +WKSLL++C+ HGN+++G+RA +N++K++P+N
Sbjct: 546 MIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSN 605
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
S VLL N+++ +G+WE+ A + +MK G+ + PG SWIE+++++H
Sbjct: 606 SLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHT 654
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 170/336 (50%), Gaps = 15/336 (4%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLY-NEALVAFDFLQNNTNFRI 78
D + C L A ++D+ DD+ ++ C + Y EALV F + N + RI
Sbjct: 279 DMYAKCGDLASARMILDTM--EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNR-DIRI 335
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
TY ++ + +S ++L++G VH + + + N +++MY K G+L A VF
Sbjct: 336 DDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVF 395
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+++ ++V+SWT+++ G NG A++L+ M + + DQF + AC+ L +
Sbjct: 396 NKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIE 455
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GRQ+HA+ IKS GS L ++N+LI MY K + DA V S+ +++ SW ++I G++
Sbjct: 456 FGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYA 515
Query: 259 K---LDFARTVFNEME-----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+ ++ ++ F ME P + +I + NEA L + M ++ PD
Sbjct: 516 QNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRM---DVEPDA 572
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
+SLL AC +L G + +IK +++P
Sbjct: 573 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLP 608
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 279/520 (53%), Gaps = 31/520 (5%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN--AAIELYVQMLQSG 176
N ++ + G + AR VFD M R+VVSW A++ + G+ + AA L+ + + S
Sbjct: 19 NQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPS- 77
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
D ++ SII C + A + ++ + NA++A + R++DA
Sbjct: 78 --RDVVSWNSIIAGCLAHGDLDAASAYFAGAPER----NVATWNAMLAGLVRLGRVVDAQ 131
Query: 237 NVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+F + +++ S+ +M+D ++ ++ AR VF+ M NL SW +I+G E
Sbjct: 132 RLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMFVE 191
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY--QG-----MQIHSYIIKKGFYS-NV 345
A LF M ++ ++ ACT+ ++ + QG ++ I K S N
Sbjct: 192 ARELFEAMPEKNVV-----------ACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNA 240
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ + E RL +LM KPDH T V+ AC+A+A L G H +K
Sbjct: 241 MIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAM 300
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L + N LM MY KCG++G + +F + D+VSW+++I YAQ G ++ + LF
Sbjct: 301 LESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFH 360
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M +G+ P+ +T + VL+AC HVG+V+ L+L+ +M ++Y I P E +C+VD+L+RA
Sbjct: 361 EMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRA 420
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G++ +A +I M + VW SLL +C+ HGNV +G+ AA+ +++ D +S V+L
Sbjct: 421 GQLEKASSYIKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGPYVILS 480
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA++G W +V ++ G MKERGV+K PG SW EI ++H
Sbjct: 481 NIYAAAGMWGQVNQIRGQMKERGVKKQPGYSWTEIGNEVH 520
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 169/356 (47%), Gaps = 31/356 (8%)
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID-----GFSKLDFARTVFNE- 269
L+ N I+ + + A VF ++ +D+ SW +++ G L AR +F+E
Sbjct: 15 LLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARRLFDEA 74
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
M S ++ SWN+IIAG + + + A + F+ +R + T ++L +
Sbjct: 75 MPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVA----TWNAMLAGLVRLGRVVDA 130
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDH--ITFNDVMGACAA 387
++ + ++ S + + + + GE+ R + + PD +++ ++ C
Sbjct: 131 QRLFDEMPERNVVSYTTMVDWLARR--GEVERAREVF---DSMPDRNLVSWAAMISGCVE 185
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
+L + + +V ++ + K G + SAR LF+ + DV+SW+++
Sbjct: 186 NGMFVEARELFEAMPEK----NVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAM 241
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN--- 504
I GY G GEEA++L M GV+P+H TL+ VLTACS + L+ +G + I
Sbjct: 242 IAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAML 301
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAE-DFINQMAFDDDIVVWKSLLASCKTHGN 559
E GI + + ++ + ++ G V E+E FIN DIV W +++A+ HG
Sbjct: 302 ESGISFS----NALMTMYSKCGNVGESELVFINLRT--KDIVSWNTIIAAYAQHGK 351
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 35 VDSFLRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
VDS R FD I D+ S + N + E + L + +T +++A
Sbjct: 220 VDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTA 279
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
CS+L L+ G+ H + + + N ++ MY KCG++ ++ +VF + +++VSW
Sbjct: 280 CSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSW 339
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+IA +Q+G+ I L+ +M +GL+PD TF S++ AC
Sbjct: 340 NTIIAAYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSAC 381
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/629 (30%), Positives = 306/629 (48%), Gaps = 82/629 (13%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD I + D++ S + +E + F ++ + T+ ++ AC R+
Sbjct: 109 FDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RN 165
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+ G K+H L D + ++++Y + G++ +AR++FDEMP R++ SW AMI+G
Sbjct: 166 VTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISG 225
Query: 156 CSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
Q+G A+ L GL D T S++ AC+ G +H++ IK S
Sbjct: 226 YCQSGNAKEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
L N LI +Y +F GS+ D + VF+ M +
Sbjct: 281 ELFVSNKLIDLYAEF---------------------GSLKD-------CQKVFDRMYVRD 312
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
L SWN+II A+ LF EM + PD LT+ SL + + +
Sbjct: 313 LISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQG 372
Query: 335 YIIKKG-FYSNVPVCNAIL------------------------------------QHQAG 357
+ ++KG F ++ + NA++ A
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFAS 432
Query: 358 ELFRLFSLML--ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG 415
E ++++M + + T+ V+ AC+ +L G +LH ++K GL LDVFV
Sbjct: 433 EAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTS 492
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L DMY KCG L A LF + + V W++LI + G GE+A+ LF+ M GV+P+
Sbjct: 493 LADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 552
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
H+T V +L+ACSH GLV+EG + +MQ +YGI P+ + C+VDL RAG++ A +FI
Sbjct: 553 HITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFI 612
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWE 595
M D +W +LL++C+ HGNVD+GK A+E++ +++P + VLL N+YAS+GKWE
Sbjct: 613 KSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWE 672
Query: 596 EVARLMGSMKERGVRKVPGQSWIEIQTKI 624
V + +G+RK PG S +E+ K+
Sbjct: 673 GVDEIRSITSGKGLRKTPGWSSMEVDNKV 701
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 232/506 (45%), Gaps = 79/506 (15%)
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+LQ + +H ++ S + + ++N+Y G++ AR FD + R+V +W MI+
Sbjct: 66 NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125
Query: 155 GCSQNGQENAAIELY-VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G + G + I + + ML SGL PD TF S+++AC V G ++H +K
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFM 182
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ +LI +Y ++ +++A +F + +D+ SW +MI G+ +
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQ-------------- 228
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
NA EA++L G R + D +TV SLL ACT +G+ IH
Sbjct: 229 --------------SGNAKEALTLSD--GLRAM--DSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 334 SYIIKKGFYSNVPVCNAI------------------------------------LQHQAG 357
SY IK G S + V N + L Q
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL-DVFVMNGL 416
LF M S+ +PD +T + + + + + + ++ G L D+ + N +
Sbjct: 331 RAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG--VRP 474
+ MY K G + SAR +FN++ + DV+SW+++I GYAQ G EA++++ M G +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISA 450
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
N T V VL ACS G + +G++L+ R+++N G+ + + D+ + GR+ +A
Sbjct: 451 NQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVGTSLADMYGKCGRLDDALS 508
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGN 559
Q+ + V W +L+A HG+
Sbjct: 509 LFYQIPRVNS-VPWNTLIACHGFHGH 533
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 17/257 (6%)
Query: 341 FYSNVPVCNA-----ILQHQAGELFRLFS-----LMLASQTKPDHITFNDVMGACAAMAS 390
+ VP C +LQ G + R FS L + + +DV +
Sbjct: 8 LFRQVPTCKGGRFTRVLQ-SVGAVVREFSASANALQDCWKNGNESKEIDDVHTLFRYCTN 66
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L+ LH ++ + +V + L+++Y G++ AR F+ + + DV +W+ +I G
Sbjct: 67 LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126
Query: 451 YAQFGCGEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
Y + G E ++ F M SSG++P++ T VL AC + V +G +++ + ++G +
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIH-CLALKFGFM 182
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
+ ++ L R G V A ++M D+ W ++++ GN ++
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMP-TRDMGSWNAMISGYCQSGNAKEALTLSDG 241
Query: 570 ILKIDPTNSAALVLLCN 586
+ +D +L+ C
Sbjct: 242 LRAMDSVTVVSLLSACT 258
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 281/536 (52%), Gaps = 63/536 (11%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
I ++S +K+H I+ + + ++++ K G ++ A +F+++ N
Sbjct: 13 FIPFLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPN 72
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIRACSGLCCVGLGRQLH 204
V + ++I + N I +Y Q+L+ + PD+FTF + ++C+ L LG+Q+H
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
H+ K H++++NALI MY KFD ++DA
Sbjct: 133 GHLYKFGPRFHVVTENALIDMYMKFDDLVDA----------------------------H 164
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF+EM ++ SWN++++G A +A LF M D+ ++ + T+ +
Sbjct: 165 KVFDEMSERDVISWNSLLSGYARLGQMKKAKGLFHLMIDKTIV-----------SWTAMI 213
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
S Y G I Y+ +A + FR L + +PD I+ V+ +
Sbjct: 214 SGYTG--IGCYV------------------EAMDFFREMQL---AGIEPDEISLISVLPS 250
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA + SLE+G +H Y + GL V N L++MY KCG L A +LF + DV+SW
Sbjct: 251 CAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISW 310
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
S++I GYA G A + F M+ + V+PN +T +G+L+ACSHVGL ++GL+ + +M+
Sbjct: 311 STMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQ 370
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+Y I P E C++D+LARAG++ A + M D +W SLL+SC+T GN+DV
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVAL 430
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
A +++++++P + VLL NIYA GKWE+V+RL +++ ++K PG S IE+
Sbjct: 431 VAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEV 486
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 179/434 (41%), Gaps = 88/434 (20%)
Query: 19 WDAFELCML---LDQAGEVVDSFLRRFDDIWDFD----LFSSLCKQN--LYNEALVAF-- 67
W C++ L Q+ +V + D + D D LF+ + N LYN + A+
Sbjct: 26 WKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYTH 85
Query: 68 ------------DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
L+ F R T+ + +C+SL S LG++VH H+ +
Sbjct: 86 NSLYCDVIRIYKQLLRKTIEFPDR-FTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFHV 144
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNV----------------------------- 146
V N +++MY K L DA VFDEM +R+V
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQMKKAKGLFHLMIDK 204
Query: 147 --VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
VSWTAMI+G + G A++ + +M +G+ PD+ + S++ +C+ L + LG+ +H
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGKWIH 264
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
+ + NALI MY+K + A +F KD+ SW +MI G+
Sbjct: 265 MYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGY------- 317
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
A NA+ A F EM ++ P+G+T LL AC+
Sbjct: 318 ---------------------AYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV----CNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
QG++ ++++ + + C + +AG+L R + KPD +
Sbjct: 357 LWQQGLKYFD-MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGS 415
Query: 381 VMGACAAMASLEMG 394
++ +C +L++
Sbjct: 416 LLSSCRTKGNLDVA 429
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/582 (29%), Positives = 292/582 (50%), Gaps = 70/582 (12%)
Query: 85 DLISACSSLRSLQLGRKVHDHIL----SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+L+ C++ L++G +H H++ SS+ + DA N ++N+Y KC AR +FD
Sbjct: 36 ELLKVCANSSYLRIGESIHAHLIVTNQSSRAE-DAYQINSLINLYVKCRETVRARKLFDL 94
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGL 199
MP+RNVVSW AM+ G +G + ++L+ M SG P++F + ++CS +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+Q H +K SH +N L+ MY S+ G +
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMY-------------------------SLCSGNGE 189
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A V +++ +L+ +++ ++G C E + + + + + + + LT S L
Sbjct: 190 ---AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRL 246
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------------------- 357
++ L +Q+HS +++ GF + V C A++
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 358 --------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E LFS M + P+ TF ++ + A ++ L+ G LH ++K
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G V V N L++MY K GS+ AR+ F+ M D+V+W+++I G + G G EAL+
Sbjct: 367 SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEA 426
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM +G PN +T +GVL ACSH+G VE+GL + + ++ + P + +C+V LL+
Sbjct: 427 FDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLS 486
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVL 583
+AG +AEDF+ + D+V W++LL +C N +GK+ AE ++ P +S VL
Sbjct: 487 KAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVL 546
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L NI+A S +WE VA++ M RGV+K PG SWI I+ + H
Sbjct: 547 LSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTH 588
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 148/341 (43%), Gaps = 42/341 (12%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
DF+ NN TY + S+LR L L +VH ++ + ++NMYGK
Sbjct: 232 DFVWNNL-------TYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGK 284
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI 187
CG + A+ VFD+ +N+ T ++ Q+ A+ L+ +M + P+++TF +
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAIL 344
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+ + + L + G LH V+KS + +H++ NAL+ MY K I DA FS + +DI
Sbjct: 345 LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI 404
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+W +MI G S R EA+ F M I
Sbjct: 405 VTWNTMISGCSHHGLGR----------------------------EALEAFDRMIFTGEI 436
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRL 362
P+ +T +L AC+ + QG+ + ++KK + P C L +AG
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKK--FDVQPDIQHYTCIVGLLSKAGMFKDA 494
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
M + + D + + ++ AC + +G ++ Y ++
Sbjct: 495 EDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIE 535
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 13/227 (5%)
Query: 40 RRFDDIWDFDLFSSLCKQNLY------NEALVAFDFLQNNTNFRIRPS--TYADLISACS 91
R FDD ++F + + Y EAL F + + P+ T+A L+++ +
Sbjct: 293 RVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK---EVPPNEYTFAILLNSIA 349
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
L L+ G +H +L S + ++ N ++NMY K GS+EDAR F M R++V+W
Sbjct: 350 ELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNT 409
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS- 210
MI+GCS +G A+E + +M+ +G +P++ TF +++ACS + V G ++K
Sbjct: 410 MISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKF 469
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK-DITSWGSMIDG 256
+ + ++ + +K DA + + + D+ +W ++++
Sbjct: 470 DVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 254/492 (51%), Gaps = 70/492 (14%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M ++ L D T+ +I+ C V R +H HV + + N LI MY KF
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKF-- 64
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
LD AR +F+EM N+ SW T+I+ ++ +
Sbjct: 65 --------------------------GLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLN 98
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
++A+ M + P+ T S+L AC L+L Q+H I+K G S+V V +A+
Sbjct: 99 HKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSAL 155
Query: 352 L--------QHQA----------------------------GELFRLFSLMLASQTKPDH 375
+ QH A E L+ M + D
Sbjct: 156 IDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQ 215
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN- 434
T V+ AC +A LE+G Q+H +++K D+ + N L+DMY KCGSL A LF
Sbjct: 216 STLTSVLRACTGLALLELGRQVHVHVLKYDQ--DLILNNALLDMYCKCGSLEDANLLFTR 273
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
M + DV+SWS++I G AQ G +ALKLF M+S G +PN++T++GVL ACSH GLV +
Sbjct: 274 MMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVND 333
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G ++ M+ +GI P RE C++DLL RAG++ EA I++M + D V W+ LL +C
Sbjct: 334 GWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGAC 393
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H NVD+ AA+ ILK+DP ++ +LL NIYA+S KWE+VA + M+ RGV+K PG
Sbjct: 394 RVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPG 453
Query: 615 QSWIEIQTKIHA 626
SWIE+ ++HA
Sbjct: 454 CSWIEVSKQVHA 465
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 192/407 (47%), Gaps = 74/407 (18%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY++LI C ++Q R VH+H+ S+ +P L N ++NMY K G L++AR +FDEM
Sbjct: 18 TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEM 77
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P RNVVSWT MI+ S + + A++ + ML+ G+ P+ +T+ S++RAC GL + R
Sbjct: 78 PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---R 134
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLH ++K S + ++ALI Y+K DA NVF+ + D+ W
Sbjct: 135 QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW----------- 183
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N+II G A S+ +E + L+ M + + D T+ S+L ACT
Sbjct: 184 -----------------NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACT 226
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------- 360
L G Q+H +++K + ++ + NA+L A LF
Sbjct: 227 GLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWS 284
Query: 361 ----------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+LF M + KP++IT V+ AC+ A L + MK
Sbjct: 285 TMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSH-AGLVNDGWYYFQSMKE 343
Query: 405 GLALDVFVMNG--LMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLI 448
+D + ++D+ + G L A +L + M +PD V+W L+
Sbjct: 344 HFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILL 390
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 185/393 (47%), Gaps = 55/393 (13%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYA 84
LLD+A + D R W + S+ NL ++AL DFL +RP+ TY+
Sbjct: 66 LLDEARNLFDEMPDRNVVSWT-TMISAYSNSNLNHKAL---DFLILMLREGVRPNMYTYS 121
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
++ AC L +L R++H IL + D + + +++ Y K G DA VF+EM
Sbjct: 122 SVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITG 178
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
++V W ++I G +QN + + LY +M ++ + DQ T S++RAC+GL + LGRQ+H
Sbjct: 179 DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH 238
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS-IARKDITSWGSMIDGFSKLDFA 263
HV+K + LI NAL+ MY K + DA +F+ + KD+ SW +M
Sbjct: 239 VHVLKYDQD--LILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTM---------- 286
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
IAG+A + +A+ LF M + P+ +T+ +L AC+
Sbjct: 287 ------------------IAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHA 328
Query: 324 ------LSLYQGMQIHSYIIK-KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHI 376
+Q M+ H I + Y C L +AG+L L+ +PD +
Sbjct: 329 GLVNDGWYYFQSMKEHFGIDPGREHYG----CIIDLLGRAGKLDEAVKLIHEMNHEPDAV 384
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
T+ ++GAC ++++ Y K L LD
Sbjct: 385 TWRILLGACRVHKNVDLAI----YAAKEILKLD 413
>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 199/662 (30%), Positives = 321/662 (48%), Gaps = 108/662 (16%)
Query: 25 CMLLD---QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
C LD +AG V D+ DLF + ++N+ A L N
Sbjct: 33 CKRLDGLMKAGRVADAL----------DLFDRMPRKNVVAWT-SAVSGLTRNGRPEAAGE 81
Query: 82 TYADLISACSSLRSL-----------------QLGRKVHDHILSSKCQPDAVLHNHILNM 124
+AD++ + +L + G +VH + + DA + + ++ +
Sbjct: 82 MFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVEL 141
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y +CGS A V M +VV++T++++ ++G+ A E QM+ G+MP++ T
Sbjct: 142 YARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTV 201
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
SI+ AC C + LG Q+H ++IK+ S +V++S
Sbjct: 202 TSILAAC---CPLVLGVQIHGYMIKAMGFSQ---------------------SVYTS--- 234
Query: 245 KDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+++D +S+ D A+TVF+ ++ N+ +W T++ +A+ LF EM
Sbjct: 235 ------STLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEM 288
Query: 302 GDRELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------- 353
++ P+ L AC S + G Q+HS IK G S++ V NA+L
Sbjct: 289 ISEGVVSPNEFAFSIALGACES---IALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGL 345
Query: 354 -HQAGELFR----------------------------LFSLMLASQTKPDHITFNDVMGA 384
Q +FR L S M + P+ F+ V+ +
Sbjct: 346 VQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSS 405
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA +A L+ G Q HC +K G + N L++MY KCG + AR F+ M+ DV SW
Sbjct: 406 CADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSW 465
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQ 503
+SLI G+AQ G + LK F M S+G PN TL+GVL AC+H GLV+EG+ +R M
Sbjct: 466 NSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMA 525
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
YG T +C+VD+L R+GR +A I +M F+ ++VWK+LLASC+ HGN++ G
Sbjct: 526 GLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETG 585
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+ AAE ++++ +SA+ VL+ I+A G+W + + M E GVRK G+SW+E++ +
Sbjct: 586 RLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNE 645
Query: 624 IH 625
+H
Sbjct: 646 VH 647
>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 199/662 (30%), Positives = 321/662 (48%), Gaps = 108/662 (16%)
Query: 25 CMLLD---QAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
C LD +AG V D+ DLF + ++N+ A L N
Sbjct: 33 CKRLDGLMKAGRVADAL----------DLFDRMPRKNVVAWT-SAVSGLTRNGRPEAAGE 81
Query: 82 TYADLISACSSLRSL-----------------QLGRKVHDHILSSKCQPDAVLHNHILNM 124
+AD++ + +L + G +VH + + DA + + ++ +
Sbjct: 82 MFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVEL 141
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y +CGS A V M +VV++T++++ ++G+ A E QM+ G+MP++ T
Sbjct: 142 YARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTV 201
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
SI+ AC C + LG Q+H ++IK+ S +V++S
Sbjct: 202 TSILAAC---CPLVLGVQIHGYMIKAMGFSQ---------------------SVYTS--- 234
Query: 245 KDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+++D +S+ D A+TVF+ ++ N+ +W T++ +A+ LF EM
Sbjct: 235 ------STLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEM 288
Query: 302 GDRELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------- 353
++ P+ L AC S + G Q+HS IK G S++ V NA+L
Sbjct: 289 ISEGVVSPNEFAFSIALGACES---IALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGL 345
Query: 354 -HQAGELFR----------------------------LFSLMLASQTKPDHITFNDVMGA 384
Q +FR L S M + P+ F+ V+ +
Sbjct: 346 VQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSS 405
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
CA +A L+ G Q HC +K G + N L++MY KCG + AR F+ M+ DV SW
Sbjct: 406 CADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSW 465
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQ 503
+SLI G+AQ G + LK F M S+G PN TL+GVL AC+H GLV+EG+ +R M
Sbjct: 466 NSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMA 525
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
YG T +C+VD+L R+GR +A I +M F+ ++VWK+LLASC+ HGN++ G
Sbjct: 526 GLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETG 585
Query: 564 KRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+ AAE ++++ +SA+ VL+ I+A G+W + + M E GVRK G+SW+E++ +
Sbjct: 586 RLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNE 645
Query: 624 IH 625
+H
Sbjct: 646 VH 647
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 293/576 (50%), Gaps = 63/576 (10%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ L+ S LR + L K+H +IL S VL +++ Y KCG L DAR VFDE+P
Sbjct: 138 FSILLKTASQLRDIVLTTKLHCNILKSNAADSFVL-TSLVDAYSKCGKLRDARKVFDEIP 196
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R+VVSWT+MI QN + L+ +M + L + FT GS++ AC+ L C+ G+
Sbjct: 197 DRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKW 256
Query: 203 LHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+H +VIK+ E S+L + +L+ MY K I DA +VF + +++ G D
Sbjct: 257 VHGYVIKNGIEINSYLAT--SLLNMYVKCGDIGDARSVFDEFS---VSTCGGGDD----- 306
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
L W +I G A+ LF++ ++P+ +T+ SLL AC
Sbjct: 307 --------------LVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSAC 352
Query: 321 TSPLSLYQGMQIHSYIIKKGF------------YSN---VPVCNAILQH----------- 354
++ G +H ++K G Y+ +P + +
Sbjct: 353 AQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNS 412
Query: 355 ------QAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
Q+G E LF+ M PD +T V+ ACA++ + ++G LH + +K G
Sbjct: 413 VISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYG 472
Query: 406 L-ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L + ++V L++ Y KCG SAR +F+ M + + V+W+++I G G G +L LF
Sbjct: 473 LVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALF 532
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
R M + PN V +L ACSH G+VEEGL ++ M E +P+ + +C+VDLLAR
Sbjct: 533 RDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLAR 592
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + EA DFI++M + V+ + L C H N D G+ A +L++ P + VL+
Sbjct: 593 AGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLI 652
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
N+YAS G+W V + +K+RG+ KVPG S +E+
Sbjct: 653 SNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEM 688
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 223/504 (44%), Gaps = 80/504 (15%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+ +H ++ S PD L +++Y G L AR +F +P S+ +I N
Sbjct: 57 KTLHASLIISGHPPDTTL----ISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLN 112
Query: 160 GQENAAIELY-VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
+ + Y + G D F +++ S L + L +LH +++KS +
Sbjct: 113 DVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAADSFV- 171
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
+L+ Y+K ++ DA VF I + + SW SMI + V NE
Sbjct: 172 LTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAY--------VQNE--------- 214
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
C A E + LF+ M + L + TV SL+ ACT L+QG +H Y+IK
Sbjct: 215 ---------C--AEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIK 263
Query: 339 KGFYSNVPVCNAILQH--------QAGELFRLFSL--------------MLASQTK---- 372
G N + ++L A +F FS+ M+ T+
Sbjct: 264 NGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYP 323
Query: 373 ----------------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
P+ +T ++ ACA + ++ MG LH ++K GL D + N L
Sbjct: 324 QAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSL 382
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
+DMY KCG + A +F D DVVSW+S+I GYAQ G EAL LF RMR P+
Sbjct: 383 VDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDA 442
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR-ERRSCVVDLLARAGRVHEAEDFI 535
VT+VGVL+AC+ VG + GL L+ +YG++ + + +++ A+ G A
Sbjct: 443 VTVVGVLSACASVGAHQIGLSLHGFAL-KYGLVSSSIYVGTALLNFYAKCGDATSARMVF 501
Query: 536 NQMAFDDDIVVWKSLLASCKTHGN 559
+ M + + V W +++ C G+
Sbjct: 502 DGMG-EKNAVTWAAMIGGCGMQGD 524
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 282/533 (52%), Gaps = 36/533 (6%)
Query: 100 RKVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
+K+H I + + L ++ Y CG R +FDE+P++NVV + MI
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
N + A+ ++ M G+ PD +T+ +++A SG + +G Q+HA V++ ++
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 1163
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N LI+MY K +++A V +ZM ++ SW
Sbjct: 1164 GNGLISMYGKCGCLVEACRVL----------------------------DZMPCRDVVSW 1195
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA----CTSPLSLYQGMQIHS 334
N+++AG A ++A+ + EM L PD T+ SLL A C +S + M +
Sbjct: 1196 NSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMK- 1254
Query: 335 YIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+ K S NV + + E +F M PD I+ V+ AC +++L +
Sbjct: 1255 -LANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLL 1313
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++H Y+++ L ++ + N L+DMY KCG L ARE+F+ M+ DVVSW+S+I Y
Sbjct: 1314 GRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGM 1373
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G G +A+ LF RM+ G+ P+ + V VL+ACSH GL++EG +++M E I+P E
Sbjct: 1374 NGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIE 1433
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
C+VDLL RAG+V EA FI QM + + VW +LL++C+ + N+ +G AA+ + ++
Sbjct: 1434 HFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQL 1493
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
P S VLL NIYA +G+WE+V + MK +G++K+PG S E+ ++H
Sbjct: 1494 CPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHT 1546
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 183/396 (46%), Gaps = 60/396 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
+ S +LY++AL+ F +N I P TY ++ A S L +G ++H ++
Sbjct: 1097 MIRSYVNNHLYSDALLVF---KNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVV 1153
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ + N +++MYGKCG L +A V DZMP R+VVSW +++AGC++NGQ + A+E
Sbjct: 1154 RVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALE 1213
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCC--VGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ +M GL PD T S++ A + C V +++ + L+S N +IA+
Sbjct: 1214 VCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS----LVSWNVMIAV 1269
Query: 226 YTKFDRILDAWNVF-----------------------------------SSIARKDITS- 249
Y +A ++F + RK +
Sbjct: 1270 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 1329
Query: 250 ---WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
++ID ++K L++AR VF++M+ ++ SW ++I+ +A+SLFS M D
Sbjct: 1330 LLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQD 1389
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGE 358
L PD + S+L AC+ L +G + ++ VP VC L +AG+
Sbjct: 1390 LGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE--CKIVPRIEHFVCMVDLLGRAGQ 1447
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ + + +P+ + ++ AC +++ +G
Sbjct: 1448 VDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIG 1483
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 279/543 (51%), Gaps = 52/543 (9%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS--GLMPDQFTFGSII 188
L +A VFD P R++ +WT++I+GC++ G+ + + +ML P+ F ++
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
R C+GL V GR++H +++S ++ NA++ MY K A F ++A+KD T
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193
Query: 249 SWGSMI-----DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-- 301
SW +I DG L A +F+E +++SWNTI++G+ + EA+ +M
Sbjct: 194 SWNIVIRACLQDG--DLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVR 251
Query: 302 --------------------GDRELIPD----------------GLTVRSLLCAC---TS 322
R+L G ++ + C C S
Sbjct: 252 AGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMES 311
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVM 382
LS++ + + + F + V + + E F ML V
Sbjct: 312 ALSIFD--RWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVA 369
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
ACA +E G Q+H ++ K G D + + ++DMY K GSL A +F + +V
Sbjct: 370 SACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVA 429
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W++++ YA G G AL++F RM++ + PN +TLV VL+ACSH GLV +G + +M
Sbjct: 430 LWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLM 489
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
Q EYGI+P E +C+VDL RAG + +A++FI + + VVWK+LL++C+ H +++
Sbjct: 490 QEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEY 549
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
+ A+E +++++ ++ + VL+ N+YA++ KW + +L SMKER VRK PGQSWI ++
Sbjct: 550 AQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKN 609
Query: 623 KIH 625
+H
Sbjct: 610 VVH 612
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 148/319 (46%), Gaps = 38/319 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
TY+ + + L S LGR++H ++ + + DA + +++MY KCG +E A +FD
Sbjct: 260 TYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRW 319
Query: 140 -EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+ + +W+ M+AG QNG+E A+E + +ML+ G+ QF S+ AC+ V
Sbjct: 320 SDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVE 379
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
GRQ+H V K H +A++ MY+K + DA +F S
Sbjct: 380 QGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRS----------------- 422
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++ N+A W T++ AS A+ +FS M +++P+ +T+ ++L
Sbjct: 423 -----------AQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLS 471
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKP 373
AC+ + G H + + + Y VP C L +AG L + + + ++
Sbjct: 472 ACSHSGLVSDG--YHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISH 529
Query: 374 DHITFNDVMGACAAMASLE 392
+ + + ++ AC +E
Sbjct: 530 EAVVWKTLLSACRLHKHIE 548
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 173/438 (39%), Gaps = 102/438 (23%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A ++ C+ L ++ GR++H IL S PD VL N +L+MY KCG AR F M Q
Sbjct: 130 AGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQ 189
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELY-------------------------------VQM 172
++ SW +I C Q+G A +L+ QM
Sbjct: 190 KDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQM 249
Query: 173 LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
+++G+ +T+ + L LGRQLH V+ + +L+ MY K +
Sbjct: 250 VRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEM 309
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
A ++F W DF E A W+T++AG
Sbjct: 310 ESALSIFD--------RWS---------DFT-------EDRQFA-WSTMVAGYVQNGREE 344
Query: 293 EAMSLFSEMGDRELIPDG-LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
EA+ F M RE +P G + S+ AC + + QG Q+H ++ K G + P+ +AI
Sbjct: 345 EALEFFRRM-LREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAI 403
Query: 352 LQ--------HQAGELFR----------------------------LFSLMLASQTKPDH 375
+ A +FR +FS M A + P+
Sbjct: 404 VDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNE 463
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSARELFN 434
IT V+ AC+ + G + + G+ + N ++D+Y + G L A+ N
Sbjct: 464 ITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAK---N 520
Query: 435 FMEDPDV----VSWSSLI 448
F+E+ + V W +L+
Sbjct: 521 FIEENKISHEAVVWKTLL 538
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 20 DAFELCMLLD---QAGEVVDSFLRRFDDIWDFD-----LFSSLCKQNLYN-EALVAFDFL 70
DAF C L+D + GE+ +S L FD DF +S++ + N A +F
Sbjct: 292 DAFVGCSLMDMYCKCGEM-ESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFF 350
Query: 71 QNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC 128
+ + + + SAC++ ++ GR+VH + + DA L + I++MY K
Sbjct: 351 RRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKS 410
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
GSLEDA +F +NV WT M+ + +GQ A+E++ +M +MP++ T +++
Sbjct: 411 GSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVL 470
Query: 189 RACS 192
ACS
Sbjct: 471 SACS 474
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 308/640 (48%), Gaps = 72/640 (11%)
Query: 47 DFDLFSSLCKQNLYN-EALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVH 103
D L++S+ K + N AFDF P+ T +++ C+ L L+ G+ +H
Sbjct: 94 DTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIH 153
Query: 104 DHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
+ S ++ + + + MY KCG +EDA ++FDE+ R+VVSWTA++ G N
Sbjct: 154 GLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDS 213
Query: 163 NAAIELYVQMLQ---SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
+E +M + G + T +AC L + GR LH +K+ G + Q
Sbjct: 214 EKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQ 273
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN---EME----S 272
++L++MY+K + +A N F + KD+ SW S+I ++ F N +M+
Sbjct: 274 SSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVY 333
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC-----ACTSPL-SL 326
P+ + I+ G + E + + R + D +LL +P L
Sbjct: 334 PDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKL 393
Query: 327 YQGMQ--------------IHSYIIKKGFYSNVPVCNAILQ------------------- 353
+ G+ +H YIIK +V + N+++
Sbjct: 394 FDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQ 453
Query: 354 -----------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
H A E LF M++ + P+ T V+ AC + SLE G
Sbjct: 454 RDVVTWNTLISSYTHSGHYA-EAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKM 512
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H YI + G L+V + L+DMY KCG L +RELFN M++ DV+SW+ +I GY G
Sbjct: 513 VHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGD 572
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
A+++F++M S V+PN +T + +L+AC+H G V+EG QL+ MQ Y I P + +
Sbjct: 573 ANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQ-YYSIKPNLKHFA 631
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+ DLL R+G + EAED + M D VW +LL++CK H +++G R A+ ++ DP
Sbjct: 632 CMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPE 691
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
N ++L N+Y S GKW+E R MKERG+ K G S
Sbjct: 692 NDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRAGWS 731
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/600 (22%), Positives = 254/600 (42%), Gaps = 101/600 (16%)
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++LQ K H I+++ + + + ++++Y + VFD Q++ W ++I
Sbjct: 43 QTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSII 102
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
NG A + Y+QM P+QFT I+ C+ L + G+ +H V KS
Sbjct: 103 KSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSG-- 160
Query: 214 SHLISQN-----ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA----- 263
L ++N + + MY K + DA +F I +D+ SW +++ G+ D +
Sbjct: 161 --LFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLE 218
Query: 264 -----RTVFNEMESPN----------LASWNTIIAG------------------------ 284
R + + E N + +IAG
Sbjct: 219 CLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLS 278
Query: 285 -VASCSNANEAMSLFSEMGDRELI-------------------------------PDGLT 312
+ C N EA + F ++ D+++ PDG+
Sbjct: 279 MYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIV 338
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTK 372
V +L + + + +G H I+++ + + V NA+L ++ F +
Sbjct: 339 VSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLS-----MYCKFGTL-----N 388
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P F+ V + + +HCYI+K + DV + N L+DMY K G+L A ++
Sbjct: 389 PAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKM 448
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F + DVV+W++LI Y G EA+ LF M S + PN TLV VL+AC H+ +
Sbjct: 449 FCRTQ-RDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSL 507
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
E+G +++ ++ E G + +VD+ A+ G++ ++ + N M + D++ W +++
Sbjct: 508 EKGKMVHQYIK-EGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMK-EKDVISWNVMIS 565
Query: 553 SCKTHGNVDVGKRAAENILK--IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
HG+ + + + + + P N+ + L + +G +E +L M+ ++
Sbjct: 566 GYGLHGDANSAMEVFQQMEQSNVKP-NAITFLSLLSACTHAGYVDEGKQLFDRMQYYSIK 624
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 278/544 (51%), Gaps = 43/544 (7%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+I CS+ + L+ + I +S+ Q + L N + L+ A +M + N
Sbjct: 786 IIKQCSTPKLLE--SALAAMIKTSQTQ-NCYLMNQFITACSSFNRLDLAVSFMTQMQKPN 842
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V + A+I G ++E YV+ML+ + P +T+ S+++A + G G L A
Sbjct: 843 VFVYNALIKGFVTCSHPIRSLEFYVRMLRDSVSPSSYTYSSLVQASA--FASGFGESLQA 900
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDF 262
H+ K G H+ Q LI Y+ RI +A VF + +D +W +M+ + + +D
Sbjct: 901 HIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDS 960
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A ++ N+M N A+WN +I G N A SLF++M +++I
Sbjct: 961 ANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIIS-------------- 1006
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVM 382
I+ Y K + + V F M+ PD +T + V+
Sbjct: 1007 -----WTTMINGYSRNKRYREAIAV---------------FYKMMEEGIIPDEVTMSTVI 1046
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
ACA + LE+G ++H Y ++ G LDV++ + L+DMY KCGSL A +F + ++
Sbjct: 1047 SACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1106
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
W+S+I G A G +EALK+F +M V+PN VT V V TAC+H GLVEEG ++YR M
Sbjct: 1107 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSM 1166
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
++Y I+ E C+V L ++AG ++EA + I M F+ + V+W +LL C+ H N+++
Sbjct: 1167 IDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLEI 1226
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKV-PGQSWIEIQ 621
+ A ++ ++P NS LL ++YA +W +VA + G M+E G+ K+ PG S I I
Sbjct: 1227 AEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 1286
Query: 622 TKIH 625
+ H
Sbjct: 1287 KRDH 1290
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 167/413 (40%), Gaps = 109/413 (26%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ PS TY+ L+ A S + G + HI + ++ Y G + +AR
Sbjct: 874 VSPSSYTYSSLVQA--SAFASGFGESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREAR 931
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFDEMP+R+ V+WT M++ Q ++A L QM +
Sbjct: 932 KVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPE--------------------- 970
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
K+E + N LI YT+ + A ++F+ + KDI SW +MI+
Sbjct: 971 -------------KNE-----ATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMIN 1012
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+S+ R EA+++F +M + +IPD +T+ +
Sbjct: 1013 GYSRNKRYR----------------------------EAIAVFYKMMEEGIIPDEVTMST 1044
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGF--------------------------YSNVP--- 346
++ AC L G ++H Y ++ GF + N+P
Sbjct: 1045 VISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKN 1104
Query: 347 -VC-NAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH- 398
C N+I++ A E ++F+ M KP+ +TF V AC +E G +++
Sbjct: 1105 LFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYR 1164
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG 450
I + +V ++ ++ K G + A EL ME +P+ V W +L+ G
Sbjct: 1165 SMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDG 1217
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 107/194 (55%), Gaps = 5/194 (2%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + +ISAC+ L L++G++VH + + + D + + +++MY KCGSLE A +VF +
Sbjct: 1041 TMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 1100
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P++N+ W ++I G + +G A++++ +M + P+ TF S+ AC+ V GR
Sbjct: 1101 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGR 1160
Query: 202 QLHAHVIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG--- 256
+++ +I S++ ++ +++K I +A + S+ + WG+++DG
Sbjct: 1161 RIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRI 1220
Query: 257 FSKLDFARTVFNEM 270
L+ A FN++
Sbjct: 1221 HKNLEIAEIAFNKL 1234
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 183/624 (29%), Positives = 303/624 (48%), Gaps = 79/624 (12%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD I + D + C N E + +D L + F ++ + AC+ ++
Sbjct: 111 FDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKH-GFGYDDIVFSKALKACTEVQD 169
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L G+K+H I+ + VL +L+MY KCG ++ + VF+++ RNVV WT+MIAG
Sbjct: 170 LDNGKKIHCQIVKVPSFDNVVL-TGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAG 228
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS--EHG 213
+N + L+ +M ++ ++ +++T+G+++ AC+ L + G+ H +IKS E
Sbjct: 229 YVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELS 288
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
S L++ +L+ MY K I +A R VFNE
Sbjct: 289 SCLVT--SLLDMYVKCGDISNA----------------------------RRVFNEHSHV 318
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
+L W +I G + NEA+SLF +M + P+ +T+ S+L C +L G IH
Sbjct: 319 DLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIH 378
Query: 334 SYIIKKGFYSNVPVCNAILQHQAG------------------------------------ 357
IK G + + V NA++ A
Sbjct: 379 GLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIH 437
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL--ALDVFVMNG 415
E LF M P+ +T + ACA++ SL +G+ LH Y +K G + V V
Sbjct: 438 EALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTA 497
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+D Y KCG SAR +F+ +E+ + ++WS++I GY + G + +L+LF M +PN
Sbjct: 498 LLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPN 557
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
T VL+ACSH G+V EG + + M +Y P+ + +C+VD+LARAG + +A D I
Sbjct: 558 ESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 617
Query: 536 NQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWE 595
+M D+ + + L C H D+G+ + +L + P +++ VL+ N+YAS G+W
Sbjct: 618 EKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWS 677
Query: 596 EVARLMGSMKERGVRKVPGQSWIE 619
+ + MK+RG+ K+ G S +E
Sbjct: 678 QAKEVRNLMKQRGLSKIAGHSIME 701
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 228/525 (43%), Gaps = 73/525 (13%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
L+S C+++ SL R+ H + + D + ++++YG G +DAR+VFD++P+ +
Sbjct: 62 LLSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
W ++ N + I+ Y +++ G D F ++AC+ + + G+++H
Sbjct: 119 FYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC 178
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++K +++ L+ MY K I ++ VF I +++ W SMI G+ K D
Sbjct: 179 QIVKVPSFDNVV-LTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYE- 236
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
E + LF+ M + ++ + T +L+ ACT +
Sbjct: 237 ---------------------------EGLVLFNRMRENSVLGNEYTYGTLVMACTKLRA 269
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QH-------------- 354
L+QG H +IK G + + ++L +H
Sbjct: 270 LHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 329
Query: 355 -----QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
E LF M KP+ +T V+ C + +LE+G +H +K G+ D
Sbjct: 330 YTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WD 388
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
V N L+ MY KC A+ +F + D+V+W+S+I G++Q G EAL LF RM +
Sbjct: 389 TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNT 448
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR--SCVVDLLARAGR 527
V PN VT+ + +AC+ +G + G L+ + G + + + ++D A+ G
Sbjct: 449 ESVMPNGVTVASLFSACASLGSLAIGSSLHA-YSVKLGFLASSSVHVGTALLDFYAKCGD 507
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
A + + + + + W +++ G+ E +LK
Sbjct: 508 AESARLIFDTIE-EKNTITWSAMIGGYGKQGDTKGSLELFEEMLK 551
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 181/606 (29%), Positives = 290/606 (47%), Gaps = 124/606 (20%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC------------- 128
TY LI ACS RS ++VH+H+L D + N ++N + C
Sbjct: 80 TYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNES 139
Query: 129 ------------------GSLEDARMVFDEMPQRNV------------------------ 146
G++E+A+ ++ +MP+R++
Sbjct: 140 SVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFD 199
Query: 147 -------VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
V+W+A+IA QN AI +V M + G+M D+ S + AC+ L V +
Sbjct: 200 EMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNM 259
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +H+ +K S++ QNALI MY+K I+
Sbjct: 260 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIM-------------------------- 293
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
AR +F+E +L SWN++I+G C+ + A ++F M +++++ +
Sbjct: 294 --VARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVV-----------S 340
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+S +S Y + E LF M S KPD T
Sbjct: 341 WSSMISGYAQNDLFD-----------------------ETLALFQEMQMSGFKPDETTLV 377
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V+ ACA +A+LE G +H YI + GL ++V + L+DMY+KCG + +A E+F M +
Sbjct: 378 SVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK 437
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+ +W++LI+G A G E +L +F M+ V PN +T +GVL AC H+GLV+EG +
Sbjct: 438 GISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHF 497
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M +++ I P + C+VDLL RAG++ EAE+ +N+M D+ W +LL +CK HG+
Sbjct: 498 YSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGD 557
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
++G+R ++++ P + VLL NIYAS GKW++V + G M + V K+PG S IE
Sbjct: 558 SEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIE 617
Query: 620 IQTKIH 625
IH
Sbjct: 618 ANGVIH 623
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 209/442 (47%), Gaps = 24/442 (5%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
++ R +F+ + N W MI Q + A LY ML + L D +T+ +I+A
Sbjct: 28 IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
CS +Q+H HV+K S + +N LI ++ + DA VF+ + D SW
Sbjct: 88 CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147
Query: 251 GSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
S++ G+ ++ A+ ++++M ++ + N++I EA LF EM +++++
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMV 207
Query: 308 PDGLTVRSLLCACTSPLSLYQ-------GM-QIHSYIIKKGFYSNVPVCNAILQHQAGEL 359
S L AC +Y+ GM +I + + S + C +L G+L
Sbjct: 208 -----TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKL 262
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
SL + ++ ++ ++ A M S + + LD+ N ++
Sbjct: 263 IHSLSLKIGTE------SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISG 316
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y+KC + +A+ +F+ M + DVVSWSS+I GYAQ +E L LF+ M+ SG +P+ TL
Sbjct: 317 YLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTL 376
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
V V++AC+ + +E+G ++ ++ G+ + ++D+ + G V A + M
Sbjct: 377 VSVISACARLAALEQGKWVHAYIKRN-GLTINVILGTTLIDMYMKCGCVETALEVFYGM- 434
Query: 540 FDDDIVVWKSLLASCKTHGNVD 561
+ I W +L+ +G V+
Sbjct: 435 IEKGISTWNALILGLAMNGLVE 456
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 173/359 (48%), Gaps = 18/359 (5%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F +D+ R +FN +E+ N WN +I ++ + A +L+ M L D T L
Sbjct: 25 FIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLL 84
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFRLFSLMLASQT 371
+ AC+ S ++ Q+H++++K GF S+V V N ++ + R+F+ +
Sbjct: 85 IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFN----ESS 140
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
D +++N ++ + ++E ++ + + + N ++ ++ G + A +
Sbjct: 141 VLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERS----IIASNSMIVLFGMRGLVVEACK 196
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
LF+ M + D+V+WS+LI + Q EEA++ F M GV + V V L+AC+++ +
Sbjct: 197 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 256
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
V G +L + + G ++ ++ + ++ G + A ++ A+ D++ W S++
Sbjct: 257 VNMG-KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE-AYLLDLISWNSMI 314
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
+ VD K +++ + D + ++++ + YA + ++E L M+ G +
Sbjct: 315 SGYLKCNLVDNAKAIFDSMPEKDVVSWSSMI---SGYAQNDLFDETLALFQEMQMSGFK 370
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 163/378 (43%), Gaps = 55/378 (14%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L+D A + DS + W + S + +L++E L F +Q + F+ +T
Sbjct: 320 CNLVDNAKAIFDSMPEKDVVSWS-SMISGYAQNDLFDETLALFQEMQM-SGFKPDETTLV 377
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ISAC+ L +L+ G+ VH +I + + +L +++MY KCG +E A VF M ++
Sbjct: 378 SVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK 437
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+ +W A+I G + NG ++++++ M + + P++ TF ++ AC + V G Q H
Sbjct: 438 GISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG-QHH 496
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLD 261
+ + +H + ++ +G M+D KL
Sbjct: 497 FYSMIHDHK-----------------------------IQPNVKHYGCMVDLLGRAGKLQ 527
Query: 262 FARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDR------ELIPDGLTVR 314
A + N M +P++A+W ++ +C + SEMG R EL PD
Sbjct: 528 EAEELLNRMPMTPDVATWGALL---GACKKHGD-----SEMGRRVGRKLIELQPDHDGFH 579
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
LL + + + ++ K +P C+ I +A + F + +T PD
Sbjct: 580 VLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMI---EANGVIHEF--LAGDKTHPD 634
Query: 375 HITFNDVMGACAAMASLE 392
D++ A LE
Sbjct: 635 MDAIEDMLVEMAMKLKLE 652
>gi|357129835|ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Brachypodium distachyon]
Length = 614
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 296/594 (49%), Gaps = 86/594 (14%)
Query: 86 LISACSSLRSLQLGRKVH-------DHILSSKCQPDA----VLHNHILNMYGKCGSLEDA 134
L+S C +LG +H H L +P V N +++MY +CG +A
Sbjct: 15 LLSRCGRAADHRLGAALHVTIVKNPSHFLLCPLRPSLRHVLVAWNALVSMYARCGRHAEA 74
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP------DQFTFGSII 188
VFDEM R+ VSW ++I +G E+A + + +ML+S P D TF +++
Sbjct: 75 ARVFDEMRIRDSVSWNSLIG---SSGAEDA-LSQFRRMLRSSSSPGGGVSCDHATFTTVL 130
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
AC+ + +H V+ + + NAL+ Y + +
Sbjct: 131 SACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECE------------------ 172
Query: 249 SWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
S GS A F+ M N+ +W +I+G+A +++ LF +M R +
Sbjct: 173 SPGS----------AERAFHGMAERNVITWTAMISGMAREELYKDSIVLFQQM-RRTVDA 221
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------- 353
+ T S L AC L+L +G QIH ++K G +++ V + ++
Sbjct: 222 NSATYSSSLLACAGSLALKEGQQIHGLVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVF 281
Query: 354 ---HQAGEL------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
Q E+ F LF+ M D + V+GA A A
Sbjct: 282 RLCRQPDEISLTVILVGFAQNGLEEKAFELFAEMAGEGILIDTNMVSAVLGAFGASAPFA 341
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G Q+H ++K +++V NGL++MY KCG L + ++FN + +SW+S+I +A
Sbjct: 342 LGKQIHALVIKKCFGRNIYVCNGLINMYSKCGELEESIQVFNETPSKNSISWNSIIAAFA 401
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
+ G G E KLF M++ G P VT + +L CSHVG ++GL++ M +EYGI+P
Sbjct: 402 RHGQGSEVFKLFESMKADGANPTDVTFLSLLHGCSHVGSAKKGLEILNSMSSEYGILPRV 461
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E +CVVD+L RAG + +A FI F D ++W++L+ +C GN ++GK AAE +L
Sbjct: 462 EHYACVVDMLGRAGLLEDARSFIEDGPFKDSALLWQALMGACSFRGNSEIGKYAAEKLLH 521
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+DP + AA VLL NIY+S G+W++ AR+M SM+E G+RK G+SWIE++ ++H+
Sbjct: 522 LDPDSPAAYVLLSNIYSSEGRWDDRARVMKSMREMGLRKDTGKSWIELEKEVHS 575
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 159/348 (45%), Gaps = 33/348 (9%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S + ++ LY +++V F ++ + +TY+ + AC+ +L+ G+++H ++ +
Sbjct: 195 MISGMAREELYKDSIVLFQQMRRTVD--ANSATYSSSLLACAGSLALKEGQQIHGLVVKA 252
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + + ++++Y KCG +ED VF Q + +S T ++ G +QNG E A EL+
Sbjct: 253 GLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDEISLTVILVGFAQNGLEEKAFELF 312
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+M G++ D +++ A LG+Q+HA VIK G ++ N LI MY+K
Sbjct: 313 AEMAGEGILIDTNMVSAVLGAFGASAPFALGKQIHALVIKKCFGRNIYVCNGLINMYSKC 372
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+ ++ VF+ K+ SW N+IIA A
Sbjct: 373 GELEESIQVFNETPSKNSISW----------------------------NSIIAAFARHG 404
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI-HSYIIKKGFYSNVP-- 346
+E LF M P +T SLL C+ S +G++I +S + G V
Sbjct: 405 QGSEVFKLFESMKADGANPTDVTFLSLLHGCSHVGSAKKGLEILNSMSSEYGILPRVEHY 464
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
C + +AG L S + K + + +MGAC+ + E+G
Sbjct: 465 ACVVDMLGRAGLLEDARSFIEDGPFKDSALLWQALMGACSFRGNSEIG 512
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 193/641 (30%), Positives = 307/641 (47%), Gaps = 68/641 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYN-EALVAFDFLQNNTNFRIRP 80
+ C LLD A V + + D+ ++ S C QN EAL F +Q+ F +
Sbjct: 209 YAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQS-AGFPMNS 267
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH-NHILNMYGKCGSLEDARMVFD 139
T ++ C+ L L LGR++H +L KC + + N +L MY K G ++ A VF
Sbjct: 268 YTSVAVLQVCAELGLLSLGRELHAALL--KCGSELNIQCNALLVMYAKYGRVDSALRVFG 325
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
++ +++ +SW +M++ QN AI+ + +MLQ G PD S+ A L +
Sbjct: 326 QIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNN 385
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR+ HA+ IK + L N L+ MY K I + VF S+ +D SW
Sbjct: 386 GREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISW--------- 436
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
TI+A A S +EA+ + E+ ++ D + + S+L
Sbjct: 437 -------------------TTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILET 477
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-LQHQAGE------LFR----------- 361
C S+ Q+H Y I+ G + I + + GE LF+
Sbjct: 478 CCGLKSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWT 537
Query: 362 -----------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
LF+ M + +PD + ++ A A ++SL G Q+H ++++
Sbjct: 538 SMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRR 597
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
++ V++ L+DMY CGS+ A +F + DVV W+++I G G++A+ LF
Sbjct: 598 NFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLF 657
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+RM +G+ P+HV+ + +L ACSH LVEEG IM ++Y + P +E +CVVD+L R
Sbjct: 658 KRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGR 717
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
+G+ EA +FI M D VW +LL +C+ H N + AA +L+++P N +L+
Sbjct: 718 SGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILV 777
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N++A GKW M ERG+RK P SWIEI IH
Sbjct: 778 SNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIH 818
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 217/508 (42%), Gaps = 78/508 (15%)
Query: 99 GRKVHDHILSSKC---QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
GR+VH H +++ D L ++ MYG+CG ++DAR +F+ MP R V SW A++
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 156 CSQNGQENAAIELYVQMLQS---GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+G A+ +Y M S G PD T S+++AC G ++H +K
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
+ NALI MY K + A VF + + ++
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWL--------------------------QQDA 229
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI 332
++ASWN++++G EA++LF M + T ++L C L G ++
Sbjct: 230 RDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGREL 289
Query: 333 HSYIIKKGFYSNVPVCNAILQHQA------------------------------------ 356
H+ ++K G N+ CNA+L A
Sbjct: 290 HAALLKCGSELNIQ-CNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFY 348
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E F ML +PDH + A ++ L G + H Y +K L D+ V N L
Sbjct: 349 AEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTL 408
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
MDMY+KCGS+ + ++F M D +SW++++ +AQ EAL++ ++ G+ +
Sbjct: 409 MDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDS 468
Query: 477 VTLVGVLTAC---SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+ + +L C + L+++ + Y I +I E R ++D+ G + +
Sbjct: 469 MMIGSILETCCGLKSISLLKQ-VHCYAIRNGLLDLI--LENR--LIDIYGECGEFDHSLN 523
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVD 561
++ DIV W S++ C +G ++
Sbjct: 524 LFQRVE-KKDIVSWTSMINCCTNNGRLN 550
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 183/593 (30%), Positives = 295/593 (49%), Gaps = 24/593 (4%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHD-HILS 108
L ++L + ++ A L R+ T++ L+ AC++L SL GR VH I S
Sbjct: 67 LANALLRAHIRARQWRAAILLGPRLRVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRS 126
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
DA + I+ MY +CG + A + + + ++V T+++ G QNG A+E
Sbjct: 127 CTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEF 186
Query: 169 YVQ-MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYT 227
+ + ++ G+M T S + A + L V G+ HA+V+++ G L N +++ Y
Sbjct: 187 FARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYV 246
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMI-------DGFSKLDFARTVFNEMESPNLASWNT 280
K + +F + +D+ +W MI D L R + PN + +
Sbjct: 247 KIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVS 306
Query: 281 IIAGVASCSNANE-------AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ A +A E A+S+ E+ + L + C+C + M +
Sbjct: 307 VLQACALVVDAEEGKRVHRVAVSIGCEL--EVGVATALVDMYMKCSCHE-----EAMCLF 359
Query: 334 SYIIKKGFYSNVPVCNAILQHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
+ KK + V + Q++ GE +F ML PD IT V+ AC+
Sbjct: 360 HRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTR 419
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+ LH Y+++ G + FV L+D+Y KCG + SA +F + D+V W S+I GY
Sbjct: 420 LAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYG 479
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G G+EA+ L++RM +S ++PN VT V VL+ACSH GLV+EG+Q++ M +G++P
Sbjct: 480 AHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNA 539
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
E +S +VDLL RAG + EA FI M W +LLA+C+ H N + K AA+++LK
Sbjct: 540 EHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAACREHNNTKMSKVAAKSLLK 599
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+DP + LL NIYA KWE V ++ R +RKVPG S +E+ +H
Sbjct: 600 LDPDHVGYYNLLTNIYAYDEKWESVKDTRDMVRGRDLRKVPGYSSVEVGNLVH 652
>gi|147859488|emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 284/563 (50%), Gaps = 77/563 (13%)
Query: 66 AFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMY 125
A+ L + F+ + T A AC+ L+ Q + ++ +PD I+ Y
Sbjct: 262 AYKTLHSLAKFKPQRETQA---LACNQLKESQRAHGRAVKLGTTILEPD------IVCSY 312
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
L DA +FDE+P +VVS TA I ++ AI + +ML + P+QF+FG
Sbjct: 313 SASKELWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFG 372
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
++I + + L + GRQLHA IK S++ +A++ Y K I +A F
Sbjct: 373 TVIPSATALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEP 432
Query: 246 DITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
++ S+ ++I G+ + D A +F M N+ SWN +I+G +S+MG
Sbjct: 433 NVVSYTTLIRGYLKKERFDDALALFRXMPERNVVSWNAMISG-------------YSQMG 479
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL 362
E E L
Sbjct: 480 YNE----------------------------------------------------EAVNL 487
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F +ML P+ TF + A A +A+L MG H +K DVF+ N L+ Y K
Sbjct: 488 FVVMLREGXLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAK 547
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ + +FN + ++VSW++LI GYA G G EA+ F +M+ +G+RPN VTL+G+
Sbjct: 548 CGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGL 607
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L AC+H GLV++G + + E + T E +C+VDLL+R+GR EAE F++++ F
Sbjct: 608 LLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEAEKFLHELPFVP 667
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
I WK+LL C+ H N+++G+ AA IL +DP + ++ V+L N ++++G+W+ V+ +
Sbjct: 668 GIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVSMIRK 727
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
M+E+ ++ VPG SWIEI++K+H
Sbjct: 728 EMREKRMKGVPGSSWIEIRSKVH 750
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 40 RRFDDIWDFDLFSSLCKQNL--------------YNEALVAFDFLQNNTNFRIRPSTYAD 85
RFDD LF + ++N+ YNE V + T+
Sbjct: 448 ERFDDA--LALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXLPNERTFPC 505
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
ISA +++ +L +GR H + + D + N +++ Y KCGS+E++ +VF+ +P++N
Sbjct: 506 AISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKN 565
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVG 198
+VSW A+I G + +G+ AI + +M +GL P+ T ++ AC SGL G
Sbjct: 566 IVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHSGLVDKG 620
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 270/543 (49%), Gaps = 68/543 (12%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQF 182
MY KCG L+ A VF M RNVVSWTA++ G ++G + L +M S P+++
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T + ++AC + G +H +++ + H + ++L+ +Y+K RI DA VF
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVF--- 117
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
D GS I A+WN +++G A + +A+ +F EM
Sbjct: 118 ---DGAGLGSGI---------------------ATWNAMVSGYAHAGHGRDALLVFREMR 153
Query: 303 DRE--LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS----------------- 343
E PD T SLL AC+ + +G Q+H+ + GF +
Sbjct: 154 RHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKC 213
Query: 344 -NVPVCNAILQH--------------------QAGELFRLFSLMLASQTKPDHITFNDVM 382
+PV + + Q E LF S +PD + V+
Sbjct: 214 RRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVV 273
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
G A A +E G Q+HCY +K DV N ++DMY+KCG A +F M P+VV
Sbjct: 274 GVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVV 333
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
SW++++ G + G G EA+ LF MR+ GV P+ VT + +L+ACSH GLV+E + + +
Sbjct: 334 SWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCI 393
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ + + P E +C+VDLL RAG + EA D I M + + VW++LL++C+ H +V V
Sbjct: 394 RRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAV 453
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
G+ A + +L +D N V L N+ A +G+W E ++ +M+ RG++K G SW+E+
Sbjct: 454 GREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGK 513
Query: 623 KIH 625
++H
Sbjct: 514 EVH 516
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 33/320 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSS--KCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+A L+ ACS L + + G +VH + +S +A+L +++MY KC L A VF+
Sbjct: 165 TFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFE 224
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ ++NV+ WTA++ G +Q GQ A+EL+ + +SG PD S++ + V
Sbjct: 225 RLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQ 284
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GRQ+H + IK G+ + + N+++ MY K +A +F + ++ SW +M++G K
Sbjct: 285 GRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGK 344
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
R EA++LF EM + PD +T +LL A
Sbjct: 345 HGLGR----------------------------EAVALFEEMRAGGVEPDEVTYLALLSA 376
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHI 376
C+ + + + S I + C L +AGEL L+ +P
Sbjct: 377 CSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVG 436
Query: 377 TFNDVMGACAAMASLEMGTQ 396
+ ++ AC + +G +
Sbjct: 437 VWQTLLSACRVHKDVAVGRE 456
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 176/450 (39%), Gaps = 77/450 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + + AC + G +H + + Q V+ + ++ +Y K G + DAR VFD
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 142 P-QRNVVSWTAMIAGCSQNGQENAAIELYVQML--QSGLMPDQFTFGSIIRACSGLCCVG 198
+ +W AM++G + G A+ ++ +M + PD+FTF S+++ACSGL
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 199 LGRQLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G Q+HA + S S+ I AL+ MY K R+ A VF + RK
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERK----------- 229
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
N+ W ++ G A EA+ LF PD + S+
Sbjct: 230 -----------------NVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSV 272
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGELFR------- 361
+ + QG Q+H Y IK ++V N+I L +A +FR
Sbjct: 273 VGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNV 332
Query: 362 ---------------------LFSLMLASQTKPDHITFNDVMGACAAMASL-EMGTQLHC 399
LF M A +PD +T+ ++ AC+ + E C
Sbjct: 333 VSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSC 392
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVG---YAQFG 455
+ ++D+ + G L AR+L M +P V W +L+ +
Sbjct: 393 IRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVA 452
Query: 456 CGEEALKLFRRMRSSGVRP-NHVTLVGVLT 484
G EA + M G P N+VTL VL
Sbjct: 453 VGREAGDVLLAM--DGDNPVNYVTLSNVLA 480
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 290/545 (53%), Gaps = 36/545 (6%)
Query: 99 GRKVHD--HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
GR V + H+ + D V N +++ Y + G +++A +FD M +RNVVSW AM+ G
Sbjct: 144 GRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGF 203
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS-----E 211
QNG AIE +++M + D + +++ +GL G + ++ S +
Sbjct: 204 LQNGDVERAIEFFMRMPER----DSASLSALV---AGLIQNGELDEAKRILLTSRRQDDD 256
Query: 212 HGSHLISQNALIAMYTKFDRILDAWNVFSSIA------------RKDITSWGSMIDGFSK 259
G + + N L+A Y + R+ A +F I +++ SW SMI + K
Sbjct: 257 KGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVK 316
Query: 260 ---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+ AR +F++M+ + SWNT+I+G S+ EA LF EM + PD LT S+
Sbjct: 317 ARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPN----PDTLTWNSM 372
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDH 375
+ +L + + I +K S N + L+ ML KPD
Sbjct: 373 ISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDR 432
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
T + V+ C+ A+L +G Q+H I KT + D+ + N L+ MY +CG++ AR +F+
Sbjct: 433 HTLSSVLSVCSGFAALHLGMQIHQQITKTVIP-DIPINNSLITMYSRCGAIVEARTIFDE 491
Query: 436 ME-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
++ +V+SW+++I GYA G +AL+LF M+ VRP ++T + VL AC+H G V+E
Sbjct: 492 VKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKE 551
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G ++ M E+GI P E + +VD++ R G++ EA D IN M F+ D VW +LL +C
Sbjct: 552 GRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGAC 611
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H NV++ + AAE ++K++P +SA VLL N+YA G+W+ + M+ +RK PG
Sbjct: 612 RVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPG 671
Query: 615 QSWIE 619
SW++
Sbjct: 672 YSWVD 676
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 205/447 (45%), Gaps = 28/447 (6%)
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
+ G + +AR +FD MPQRN+V+W +MI G + + A +L+ + MPD+
Sbjct: 79 RNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDE------MPDRDVVSW 132
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+ + C G + H+ +S N +I+ YT+ R+ +A +F S+ ++
Sbjct: 133 NLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERN 192
Query: 247 ITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS-LFSEMG 302
+ SW +M+ GF ++ A F M + AS + ++AG+ +EA L +
Sbjct: 193 VVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRR 252
Query: 303 DRELIPDGLTVRSLLCA-------CTSPLSLYQGMQIHSYIIKKG--FYSNVPVCNAILQ 353
+ D + ++L A L+ + + K G F NV N+++
Sbjct: 253 QDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIM 312
Query: 354 --HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
+A ++F ++ + D I++N ++ M+ +E L + D
Sbjct: 313 CYVKARDIFSA-RVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNP----DTL 367
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
N ++ + + G+L AR LF + ++VSW+S+I GY G + A +L+R+M G
Sbjct: 368 TWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQG 427
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+P+ TL VL+ CS + G+Q+++ Q +IP + ++ + +R G + EA
Sbjct: 428 EKPDRHTLSSVLSVCSGFAALHLGMQIHQ--QITKTVIPDIPINNSLITMYSRCGAIVEA 485
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHG 558
+++ +++ W +++ HG
Sbjct: 486 RTIFDEVKLQKEVISWNAMIGGYAFHG 512
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 55/331 (16%)
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMES 272
L + N I+ + RI +A +F ++ +++I +W SMI G+ + + AR +F+EM
Sbjct: 67 LYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPD 126
Query: 273 PNLASWNTIIAGVASCSN--ANEAMSLFSEMGDRELIPDGLTVRSLLCACT------SPL 324
++ SWN +I+G SC E LF EM +R D ++ +++ T L
Sbjct: 127 RDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPER----DCVSWNTMISGYTRSGRMDEAL 182
Query: 325 SLYQGMQIHSYI----IKKGFYSNVPVCNAILQH-------------------QAGELFR 361
L+ MQ + + + GF N V AI Q GEL
Sbjct: 183 QLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDE 242
Query: 362 LFSLMLASQTKPDHI-----TFNDVMGACAAMASLEMGTQLHCYI------MKTG--LAL 408
++L S+ + D +N ++ ++ QL I K G
Sbjct: 243 AKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFER 302
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+V N ++ YVK + SAR LF+ M++ D +SW+++I GY + EEA LF+ M
Sbjct: 303 NVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMP 362
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+ P+ +T +++ + G +E L+
Sbjct: 363 N----PDTLTWNSMISGFAQKGNLELARALF 389
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 114/228 (50%), Gaps = 30/228 (13%)
Query: 50 LFSSLCKQNL--YNEALVAFDFLQNNTNFR-------------IRPS--TYADLISACSS 92
LF+++ ++NL +N + + +NN +++ +P T + ++S CS
Sbjct: 388 LFATIPQKNLVSWNSMIAGY---ENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSG 444
Query: 93 LRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP-QRNVVSWTA 151
+L LG ++H I + PD ++N ++ MY +CG++ +AR +FDE+ Q+ V+SW A
Sbjct: 445 FAALHLGMQIHQQI-TKTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNA 503
Query: 152 MIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE 211
MI G + +G A+EL+ M + + P TF S++ AC+ V GR +H + E
Sbjct: 504 MIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGR-MHFKSMACE 562
Query: 212 HG-----SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
G H S ++ + + + +D N S D WG+++
Sbjct: 563 FGIEPRIEHFASLVDIVGRHGQLEEAMDLIN--SMPFEPDKAVWGALL 608
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 388 MASLEMGTQLHCYIM-----KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
+ +L LHC++ K ++LD++ N + ++ G + AR LF+ M ++V
Sbjct: 40 LKNLSPPPHLHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIV 99
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+W+S+I GY + +A KLF M V ++ + G ++ VEEG L+ M
Sbjct: 100 TWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCQGR--WVEEGRHLFDEM 157
Query: 503 QNEYGIIPTRE--RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
P R+ + ++ R+GR+ EA + M + ++V W +++ +G+V
Sbjct: 158 -------PERDCVSWNTMISGYTRSGRMDEALQLFDSMQ-ERNVVSWNAMVTGFLQNGDV 209
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
+ RA E +++ +SA+L L +G+ +E R++
Sbjct: 210 E---RAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRIL 247
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 278/516 (53%), Gaps = 55/516 (10%)
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFT 183
Y + G +E+ +F MP+RN+VSWTAMI G + NG A+ L+++M + + P+ T
Sbjct: 175 YCRAGEVEEGYHLFRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIET 234
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVI-----KSEHGSHLISQNALIAMYTKFDRILDAWNV 238
F S+ AC+GL LG+QLHA +I ++ L LI MY+ + A +
Sbjct: 235 FISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRL--SKGLICMYSSIGFMDYAHYI 292
Query: 239 FSSIARKDIT-SWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
F+ + + S MI+G+ + LD A+ +F+ M + +W ++I G N +EA
Sbjct: 293 FNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEA 352
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH 354
SLF M +++ + A T+ +S H
Sbjct: 353 CSLFLYMPEKDAV-----------AWTTMIS---------------------------GH 374
Query: 355 QAGELFR----LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
ELF LFS ML +P T+ + GA A+ASL+ G QLH + KT D+
Sbjct: 375 VRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDL 434
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+ N L+ MY KCG + +A +F+ M D++SW+S+I+G++ G EAL++F M S
Sbjct: 435 ILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGLANEALEVFEAMVDS 494
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G PN VT +GVL+ACSH GL+ +G +++ M + + + P E C+V+LL RAG++ E
Sbjct: 495 GTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYICMVNLLGRAGKLKE 554
Query: 531 AEDFINQMAFDDDIVVWKSLLASCK-THGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
AE+ I + + + +W +LL C + N D+ KRAA IL++DP N+ A VLLCNIYA
Sbjct: 555 AEELILGLPLERNHAIWGALLGVCSFSEKNADIAKRAATRILELDPLNAPAHVLLCNIYA 614
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+SG+ E +L M +GV+KVPG SWI + ++H
Sbjct: 615 ASGQHIEEHKLRKEMGLKGVKKVPGCSWIVLNGRVH 650
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 210/467 (44%), Gaps = 45/467 (9%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+ +AV +N +L+ +CG L +A +F+EMP+RNVVSWT+M+ G + G+ A L+ +
Sbjct: 38 ERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVVSWTSMLCGLADAGKICEAKSLFEE 97
Query: 172 MLQSGLMPDQ--FTFGSIIRACSGLCCVGLGR----QLHAHVIKSEHGSHLISQNALIAM 225
MPD+ ++ ++I VGL R + V + S N +IA
Sbjct: 98 ------MPDRNVVSWNAMI--------VGLIRNGDLEAARMVFDESPVKNAASWNGMIAG 143
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTII 282
Y + R+ +A +F + +++ +W SM+ G+ +++ +F M N+ SW +I
Sbjct: 144 YAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWTAMI 203
Query: 283 AGVASCSNANEAMSLFSEMG-DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
G +A+ LF EM ++ P+ T SL AC G Q+H+ +I +G
Sbjct: 204 GGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITEGL 263
Query: 342 YSNVPVCNAILQHQAGELFRLFSLMLASQTKPD--HITFND-----VMGACAAMASLEMG 394
++ G L + M +S D H FN V+ +C M + +
Sbjct: 264 DND---------DYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIR 314
Query: 395 TQL---HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
L + T D ++D Y+ G++ A LF +M + D V+W+++I G+
Sbjct: 315 IGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPEKDAVAWTTMISGH 374
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+ EA LF M + GVRP T + A V +++G QL+ ++
Sbjct: 375 VRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDL 434
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
S ++ + A+ G + A +QM D++ W S++ HG
Sbjct: 435 ILENS-LISMYAKCGEIRNAYRIFSQM-ISHDLISWNSMIMGFSHHG 479
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 35/278 (12%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D + +++ Y G++ +A +F MP+++ V+WT MI+G +N A L+ +ML
Sbjct: 332 DKITWTSMIDGYLVIGNVSEACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEML 391
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
G+ P T+ + A + + GRQLHA + K+ + LI +N+LI+MY K I
Sbjct: 392 TQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIR 451
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+A+ +FS + D+ SW SMI GFS ANE
Sbjct: 452 NAYRIFSQMISHDLISWNSMIMGFSHHGL----------------------------ANE 483
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS-----YIIKKGFYSNVPVC 348
A+ +F M D P+ +T +L AC+ + QG +I + + ++ G + +
Sbjct: 484 ALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYICMV 543
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACA 386
N L +AG+L L+L + +H + ++G C+
Sbjct: 544 N--LLGRAGKLKEAEELILGLPLERNHAIWGALLGVCS 579
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVHDHIL 107
+ S + L+ EA F + +RP STYA L A ++ SL GR++H +
Sbjct: 370 MISGHVRNELFAEATYLFSEMLTQG---VRPLSSTYAILFGAAGAVASLDQGRQLHAMLT 426
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ D +L N +++MY KCG + +A +F +M +++SW +MI G S +G N A+E
Sbjct: 427 KTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGLANEALE 486
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++ M+ SG P+ TF ++ ACS + G ++
Sbjct: 487 VFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEI 522
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 53/272 (19%)
Query: 247 ITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
I W S++ +S+ +D AR +F+ M N S+N +++G+ C +EAM LF EM +
Sbjct: 10 IVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPE 69
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLF 363
R ++ + S+LC G +C +A LF
Sbjct: 70 RNVV----SWTSMLC---------------------GLADAGKIC------EAKSLF--- 95
Query: 364 SLMLASQTKPDH--ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
+ PD +++N ++ LE + + NG++ Y
Sbjct: 96 ------EEMPDRNVVSWNAMIVGLIRNGDLEAARM----VFDESPVKNAASWNGMIAGYA 145
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
+ G + AR LF+ MED +V++W+S++ GY + G EE LFR M + N V+
Sbjct: 146 ENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMP----KRNIVSWTA 201
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
++ + G E+ L L+ M+ I P E
Sbjct: 202 MIGGFTWNGFYEDALLLFLEMKRGADITPNIE 233
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+V W+SL+ Y++ G +EA LF M N V+ +L+ G + E ++L+
Sbjct: 10 IVYWTSLLSKYSRSGFVDEARALFDIMPER----NAVSYNALLSGLLQCGRLSEAMKLFE 65
Query: 501 IMQNEYGIIPTRERRSCVVDL--LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
M P R S L LA AG++ EA+ +M D ++V W +++ +G
Sbjct: 66 EM-------PERNVVSWTSMLCGLADAGKICEAKSLFEEMP-DRNVVSWNAMIVGLIRNG 117
Query: 559 NVDVGKRAAENILKIDPT-NSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+++ AA + P N+A+ + YA +G+ EE L M++R V
Sbjct: 118 DLE----AARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNV 165
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 281/519 (54%), Gaps = 51/519 (9%)
Query: 158 QNGQENAAIELYVQMLQSGLMPDQFT------------FGSIIRACSGLCCVGLGRQLHA 205
QNG+ + E + + G + + F F ++++AC L V LG+QLH+
Sbjct: 34 QNGRFSDGNEQFATLCSKGHIREAFESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHS 93
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID---GFSKLDF 262
+ S S N L+ +Y+KF + A +F + R++I S MI G L+
Sbjct: 94 LIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLES 153
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A+ +F+EM N+A+WN ++ G+ EA+ LFS M + +PD ++ S+L C
Sbjct: 154 AKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAH 213
Query: 323 PLSLYQGMQIHSYIIKKGFYSNV--------------------------PVC-----NAI 351
+L G Q+H+Y++K GF N+ P C N +
Sbjct: 214 LGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTL 273
Query: 352 LQHQAGE-----LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ +A + + + +M + +PD ITF V+ +C+ +A L G Q+H +K G
Sbjct: 274 MSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGA 333
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+ +V V++ L+ MY +CG L + + F ++ DVV WSS+I Y G GEEA+KLF
Sbjct: 334 SSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNE 393
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M + N +T + +L ACSH GL ++GL L+ +M +YG+ + +C+VDLL R+G
Sbjct: 394 MEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSG 453
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EAE I M D ++WK+LL++CK H N ++ +R A+ +L+IDP +SA+ VLL N
Sbjct: 454 CLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLAN 513
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
IY+S+ +W+ V+ + +MK++ V+K PG SW+E++ ++H
Sbjct: 514 IYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVH 552
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 194/440 (44%), Gaps = 39/440 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L+ A + D R W+ + + L K + EAL+ F + N +F + ++
Sbjct: 151 LESAKNLFDEMPDRNVATWN-AMVTGLTKFEMNEEALLLFSRM-NELSFMPDEYSLGSVL 208
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
C+ L +L G++VH +++ + + V+ + +MY K GS+ D V + MP ++V
Sbjct: 209 RGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLV 268
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W +++G +Q G ++ Y M +G PD+ TF S+I +CS L + G+Q+HA
Sbjct: 269 AWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEA 328
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+K+ S + ++L++MY++ + D+ F +D+ W SMI
Sbjct: 329 VKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMI------------- 375
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
A EA+ LF+EM L + +T SLL AC+
Sbjct: 376 ---------------AAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKD 420
Query: 328 QGMQIHSYIIKK-GFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G+ + ++KK G + + C L ++G L +++ + K D I + ++ A
Sbjct: 421 KGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSA 480
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV--- 441
C + E+ ++ +++ D L ++Y + E+ M+D V
Sbjct: 481 CKIHKNAEIARRVADEVLRID-PQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKE 539
Query: 442 --VSWSSLIVGYAQFGCGEE 459
+SW + QF G+E
Sbjct: 540 PGISWVEVKNQVHQFHMGDE 559
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 297/587 (50%), Gaps = 72/587 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY +I + + + SL+ G+K+H ++ + D + N ++++Y K G DA VF+EM
Sbjct: 128 TYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEM 187
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R++VSW +MI+G ++ L+ +ML+ G PD+F+ S + ACS + +G+
Sbjct: 188 PERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGK 247
Query: 202 QLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
+LH H ++S E G ++ +++ MY+K+ + A +F I ++
Sbjct: 248 ELHCHAVRSRIETGDVMV-MTSILDMYSKYGEVSYAERIFKCIIQR-------------- 292
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLC 318
N+ +WN +I A S +A F +M ++ L PD +T+ +LL
Sbjct: 293 --------------NIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLP 338
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQAGEL------------ 359
AC ++ +G IH Y +++GF ++ + A++ Q ++ E+
Sbjct: 339 AC----AILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLIS 394
Query: 360 -----------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
LF + S PD T ++ A A SL G Q+H YI+
Sbjct: 395 WNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIV 454
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K+ + ++N L+ MY CG L AR+ FN + DVVSW+S+I+ YA G G ++
Sbjct: 455 KSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVC 514
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M +S V PN T +L ACS G+V+EG + + M+ EYGI P E ++DL+
Sbjct: 515 LFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLI 574
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G A+ FI +M F +W SLL + + H ++ V + AAE I K++ N+ V
Sbjct: 575 GRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYV 634
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGN 629
LL N+YA + +WE+V R+ M+ +G+ + +S +E ++K H N
Sbjct: 635 LLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTN 681
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/540 (27%), Positives = 246/540 (45%), Gaps = 90/540 (16%)
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
L + G +EDA +FDEM + + W MI G + G A++LY +M+ SG+ D
Sbjct: 67 LRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADS 126
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
FT+ +I++ +G+ + G+++HA VIK S + N+LI++Y K DA VF
Sbjct: 127 FTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEE 186
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+ +DI SW SMI G+ L+ + ++ LF EM
Sbjct: 187 MPERDIVSWNSMISGYLALE----------------------------DGFRSLMLFKEM 218
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQ--HQAGE 358
PD + S L AC+ S G ++H + ++ + +V V +IL + GE
Sbjct: 219 LKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGE 278
Query: 359 LF---RLFSLMLASQT--------------------------------KPDHITFNDVMG 383
+ R+F ++ +PD IT +++
Sbjct: 279 VSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLP 338
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
ACA + G +H Y M+ G + + L+DMY + G L SA +F+ + + +++S
Sbjct: 339 ACAILE----GRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLIS 394
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIM 502
W+S+I Y Q G AL+LF+++ S + P+ T+ +L A + + EG Q++ I+
Sbjct: 395 WNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIV 454
Query: 503 QNEYG---IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH-- 557
++ YG II + +V + A G + +A N + D+V W S++ + H
Sbjct: 455 KSRYGSNTIIL-----NSLVHMYAMCGDLEDARKCFNHVLL-KDVVSWNSIIMAYAVHGF 508
Query: 558 GNVDVGKRAAENILKIDPTNS--AALVLLCNIYASSGKWEEVARLMGSMK-ERGVRKVPG 614
G + V + K+DP S A+L+ C+I SG +E SMK E G+ PG
Sbjct: 509 GRISVCLFSEMIASKVDPNKSTFASLLAACSI---SGMVDEGWEYFESMKREYGID--PG 563
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 187/641 (29%), Positives = 315/641 (49%), Gaps = 79/641 (12%)
Query: 34 VVDSFLRRFDDIWDFDL------FSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--D 85
VV+ ++ F+ + + DL S K Y +L+ F + F I P+ A
Sbjct: 159 VVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMV--WEFGIYPNRVACVS 216
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM---- 141
I +CSSL+SL GR++H ++ S + L + ++ MY KCGS+++A +F+ +
Sbjct: 217 SILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKD 276
Query: 142 -PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+RN V W MI+G NG + A+ L+++M+ G+ PD T S+ CS + G
Sbjct: 277 SVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFG 336
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H + K +++ + AL+ MY K G M G
Sbjct: 337 KQIHGLIFKFGLKNNIRVETALLDMYLK---------------------CGDMGTGLK-- 373
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+F ++ NL W+ +I+ A +A+ LF E + + D + ++L AC
Sbjct: 374 -----IFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRAC 428
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------------------- 353
+S +GMQIH K GF S+V V +A++
Sbjct: 429 SSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWN 488
Query: 354 ---------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
A E + F M + +P+ +T ++ CA ++ + + ++H Y+++
Sbjct: 489 ALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQ 548
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
GL V V N L+ Y KCG + S+ F M + + VSW+S+I+G +E + LF
Sbjct: 549 GLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLF 608
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M +SG++P+HVT +L+ACSH G V+EG + ++ M ++ + P E+ +C+VDLL R
Sbjct: 609 DKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGR 668
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG +++A D I M D +W SLL SCK HG+ + + A +I K+ P++ VLL
Sbjct: 669 AGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLL 728
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+Y + GK E +++ +K+ G++K PG SWIE+ H
Sbjct: 729 ANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFH 769
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 164/578 (28%), Positives = 263/578 (45%), Gaps = 85/578 (14%)
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
FR P LI A L + GR++H H+L D + N +L MY KCG +EDA
Sbjct: 109 FRYFPC----LIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAV 164
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGL 194
+F++MP+ ++VSW MI+G ++ ++ + M+ + G+ P++ S I +CS L
Sbjct: 165 QMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSL 224
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ GR++H V+KS ++LI MY K I +A N+F+SI KD ++I
Sbjct: 225 QSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVI 284
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
WN +I+G S ++A+ LF +M + PD T+
Sbjct: 285 -----------------------WNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMV 321
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------------- 353
SL C+ L + G QIH I K G +N+ V A+L
Sbjct: 322 SLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNH 381
Query: 354 ------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+A ELF F + D V+ AC+++ G
Sbjct: 382 NLIMWSAVISNCAQSGCPTKALELFYEFKM---EDGLADSGILVAVLRACSSLTLKPEGM 438
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+H K G DVFV + L+D+Y KC +G ++++F + D+VSW++LI GYAQ
Sbjct: 439 QIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDE 498
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE--EGLQLYRIMQNEYGIIPTRE 513
C +EALK FR M+ +RPN VT+ +L+ C+H+ ++ + + Y I Q G+ T
Sbjct: 499 CADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQ---GLGSTVL 555
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD-----VGKRAAE 568
+ ++ A+ G ++ + +M +D V W S++ H D K A
Sbjct: 556 VSNSLIATYAKCGDINSSLYTFEKMPERND-VSWNSIILGMGMHSRTDEMIVLFDKMVAS 614
Query: 569 NILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
I K D A++ C + +G+ +E + SM E
Sbjct: 615 GI-KPDHVTFTAILSAC---SHAGRVDEGCKYFKSMVE 648
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 203/420 (48%), Gaps = 35/420 (8%)
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFT-FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+++G + AI +Y++ML G+ ++F F +I+A GLC V GRQ+H HV+K
Sbjct: 84 TEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDD 143
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-LDFARTV--FNEME- 271
+ N+L+ MY K + DA +F + D+ SW +MI GF K +D+ R++ F M
Sbjct: 144 VSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVW 203
Query: 272 ----SPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL----IPDGLTVRSLLCACTSP 323
PN + ++ + SCS SL S RE+ + GL V L +
Sbjct: 204 EFGIYPNRVA---CVSSILSCS------SLQSLTHGREIHGVVVKSGLDVEEYLVSSLIE 254
Query: 324 L-----SLYQGMQIHSYIIKK------GFYSNVPVCNAILQHQAGELFRLFSLMLASQTK 372
+ S+ I + I+ K NV + + + LF M+ K
Sbjct: 255 MYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIK 314
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
PD+ T + C+ + G Q+H I K GL ++ V L+DMY+KCG +G+ ++
Sbjct: 315 PDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKI 374
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F ++ +++ WS++I AQ GC +AL+LF + + LV VL ACS + L
Sbjct: 375 FRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLK 434
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
EG+Q++ + + G + S +VDL A+ + ++ +++ D+V W +L++
Sbjct: 435 PEGMQIHG-LATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLS-QKDLVSWNALIS 492
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 181/606 (29%), Positives = 290/606 (47%), Gaps = 124/606 (20%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC------------- 128
TY LI ACS RS ++VH+H+L D + N ++N + C
Sbjct: 215 TYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNES 274
Query: 129 ------------------GSLEDARMVFDEMPQRNV------------------------ 146
G++E+A+ ++ +MP+R++
Sbjct: 275 SVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFD 334
Query: 147 -------VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
V+W+A+IA QN AI +V M + G+M D+ S + AC+ L V +
Sbjct: 335 EMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNM 394
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +H+ +K S++ QNALI MY+K I+
Sbjct: 395 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIM-------------------------- 428
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
AR +F+E +L SWN++I+G C+ + A ++F M +++++ +
Sbjct: 429 --VARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVV-----------S 475
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+S +S Y + E LF M S KPD T
Sbjct: 476 WSSMISGYAQNDLFD-----------------------ETLALFQEMQMSGFKPDETTLV 512
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V+ ACA +A+LE G +H YI + GL ++V + L+DMY+KCG + +A E+F M +
Sbjct: 513 SVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK 572
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
+ +W++LI+G A G E +L +F M+ V PN +T +GVL AC H+GLV+EG +
Sbjct: 573 GISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHF 632
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M +++ I P + C+VDLL RAG++ EAE+ +N+M D+ W +LL +CK HG+
Sbjct: 633 YSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGD 692
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
++G+R ++++ P + VLL NIYAS GKW++V + G M + V K+PG S IE
Sbjct: 693 SEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIE 752
Query: 620 IQTKIH 625
IH
Sbjct: 753 ANGVIH 758
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 211/451 (46%), Gaps = 32/451 (7%)
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCS-----QNGQENAAIELYVQMLQSGLMPDQ 181
K S+ ++ PQ N +W M A S Q + A LY ML + L D
Sbjct: 157 KSRSVNKGFLLLMRYPQAN--TWK-MPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADN 213
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
+T+ +I+ACS +Q+H HV+K S + +N LI ++ + DA VF+
Sbjct: 214 YTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNE 273
Query: 242 IARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLF 298
+ D SW S++ G+ ++ A+ ++++M ++ + N++I EA LF
Sbjct: 274 SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLF 333
Query: 299 SEMGDRELIPDGLTVRSLLCACTSPLSLYQ-------GM-QIHSYIIKKGFYSNVPVCNA 350
EM +++++ S L AC +Y+ GM +I + + S + C
Sbjct: 334 DEMLEKDMV-----TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388
Query: 351 ILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
+L G+L SL + ++ ++ ++ A M S + + LD+
Sbjct: 389 LLVVNMGKLIHSLSLKIGTE------SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDL 442
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
N ++ Y+KC + +A+ +F+ M + DVVSWSS+I GYAQ +E L LF+ M+ S
Sbjct: 443 ISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMS 502
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
G +P+ TLV V++AC+ + +E+G ++ ++ G+ + ++D+ + G V
Sbjct: 503 GFKPDETTLVSVISACARLAALEQGKWVHAYIKRN-GLTINVILGTTLIDMYMKCGCVET 561
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
A + M + I W +L+ +G V+
Sbjct: 562 ALEVFYGM-IEKGISTWNALILGLAMNGLVE 591
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 163/378 (43%), Gaps = 55/378 (14%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L+D A + DS + W + S + +L++E L F +Q + F+ +T
Sbjct: 455 CNLVDNAKAIFDSMPEKDVVSWS-SMISGYAQNDLFDETLALFQEMQM-SGFKPDETTLV 512
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ISAC+ L +L+ G+ VH +I + + +L +++MY KCG +E A VF M ++
Sbjct: 513 SVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK 572
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+ +W A+I G + NG ++++++ M + + P++ TF ++ AC + V G Q H
Sbjct: 573 GISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG-QHH 631
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLD 261
+ + +H + ++ +G M+D KL
Sbjct: 632 FYSMIHDHK-----------------------------IQPNVKHYGCMVDLLGRAGKLQ 662
Query: 262 FARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFSEMGDR------ELIPDGLTVR 314
A + N M +P++A+W ++ +C + SEMG R EL PD
Sbjct: 663 EAEELLNRMPMTPDVATWGALL---GACKKHGD-----SEMGRRVGRKLIELQPDHDGFH 714
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPD 374
LL + + + ++ K +P C+ I +A + F + +T PD
Sbjct: 715 VLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMI---EANGVIHEF--LAGDKTHPD 769
Query: 375 HITFNDVMGACAAMASLE 392
D++ A LE
Sbjct: 770 MDAIEDMLVEMAMKLKLE 787
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 154/322 (47%), Gaps = 18/322 (5%)
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
A +L+ M L D T L+ AC+ S ++ Q+H++++K GF S+V V N ++
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 354 -----HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+ R+F+ + D +++N ++ + ++E ++ + +
Sbjct: 257 CFSVCSNMTDACRVFN----ESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERS--- 309
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ N ++ ++ G + A +LF+ M + D+V+WS+LI + Q EEA++ F M
Sbjct: 310 -IIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMH 368
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
GV + V V L+AC+++ +V G +L + + G ++ ++ + ++ G +
Sbjct: 369 KIGVMVDEVVAVSALSACANLLVVNMG-KLIHSLSLKIGTESYINLQNALIYMYSKCGDI 427
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
A ++ A+ D++ W S+++ VD K +++ + D + ++++ + Y
Sbjct: 428 MVARKLFDE-AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMI---SGY 483
Query: 589 ASSGKWEEVARLMGSMKERGVR 610
A + ++E L M+ G +
Sbjct: 484 AQNDLFDETLALFQEMQMSGFK 505
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 300/573 (52%), Gaps = 54/573 (9%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL--EDARMVFDE-MPQRNVVSWTAM 152
L+LG ++H LS +L +L++Y SL A + D +P + + +
Sbjct: 89 LRLGVQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAADSTLP----LPYNVL 144
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
I+ C ++G A+ Y +M ++G++PD FT+ S++RAC+ + LGR +H H +
Sbjct: 145 ISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGM 204
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS-------KLDFART 265
+L QNAL++MY K + A VF + ++D+ SW SMI ++ ++ R
Sbjct: 205 DGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRR 264
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLCACTSP 323
+ +E N +WNTI G + A+ L EM G E+ D +T+ L AC+
Sbjct: 265 MRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEV--DYVTLVIGLNACSRV 322
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQ--------AGELFRL------------- 362
L G +IH ++ V NA++ A LFR+
Sbjct: 323 GWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTML 382
Query: 363 ---------------FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
F M+ KP+++T + CA +A+L+ G +LH +I+K G
Sbjct: 383 SSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFK 442
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+ N L+DMY K G L A+ +F+ M+D D++S++S+I GY G G AL+LF +M
Sbjct: 443 GYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQM 502
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
SG++P+H+ +V VL+ACSH GLV EG +L+ M YGI P E SC++DL ARAG
Sbjct: 503 IDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGL 562
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ +AE+ ++ F +W +L+ +C GN+++G+RAA +L++ N+ VL+ N+
Sbjct: 563 LEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAGHYVLIANM 622
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
YA++G W+E+A + M++ GV K PG +W ++
Sbjct: 623 YAAAGCWDELATVRKLMRDLGVTKAPGLAWTDL 655
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 219/492 (44%), Gaps = 63/492 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
L SS + L +AL A+ + N + P TY ++ AC+ R L LGR VH H
Sbjct: 144 LISSCLRHGLPLQALAAYQEMGKNG---VLPDVFTYPSVLRACAEARELVLGRAVHMHAA 200
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ + N +++MY KCG L AR VFD M QR+VVSW +MI+ + GQ A+E
Sbjct: 201 GAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAME 260
Query: 168 LYVQMLQSGLMPDQFTFGSI----IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
L+ +M G + T+ +I I+ VGL R++ + ++ + +I NA
Sbjct: 261 LFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACS 320
Query: 224 AM-YTKFDRILDAWNV------FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+ + + + + V S++ IT + D ++ AR +F +E P +
Sbjct: 321 RVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKD----MECARMLFRMLECPGVV 376
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
+WNT+++ A A EA S+F EM R + P+ +TV + L C +L G ++H +I
Sbjct: 377 TWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHI 436
Query: 337 IKKGF--------------------------YSNVPVCNAI----------LQHQAGELF 360
+K GF + + C+ I +Q +
Sbjct: 437 VKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVAL 496
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL-HCYIMKTGLALDVFVMNGLMDM 419
RLF M+ S KPDHI V+ AC+ + G +L + ++ G+ + + ++D+
Sbjct: 497 RLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDL 556
Query: 420 YVKCGSLGSARELFNFMEDPDVVS-WSSLIVGYAQFG---CGEEALKLFRRMRSSGVRPN 475
Y + G L A E+ + P + W++L+ G GE A + MR+
Sbjct: 557 YARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENA--G 614
Query: 476 HVTLVGVLTACS 487
H L+ + A +
Sbjct: 615 HYVLIANMYAAA 626
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 273/540 (50%), Gaps = 65/540 (12%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP-DQF 182
MY K G L DA +FDEMP R+ VSW MI+G ++G + + QM G DQ
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T +I+ AC + + +H + + + NALI Y K
Sbjct: 61 TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKC------------- 107
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
GFS VF+EM N+ +W II+G+ +++ LF EM
Sbjct: 108 -------------GFS--SSGMQVFDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMT 152
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------- 353
+ + P+ LT S L AC+ +L +G QIH + K G S+ V +A++
Sbjct: 153 NGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMG 212
Query: 354 ------HQAGEL---------------------FRLFSLMLASQTKPDHITFNDVMGACA 386
AG+L + F ML + T+ D + V+G
Sbjct: 213 DTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFG 272
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
A SL +G Q+H ++K + FV NGL++MY KCG L + ++F+ M + VSW+S
Sbjct: 273 ADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNS 332
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY 506
+I +A+ G G AL+L++ MR GV P VT + +L ACSHVGLVE+G++ + M +
Sbjct: 333 MIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVH 392
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
+ P E +CVVD+L RAG ++EA+ FI + D++VW++LL +C HG+ ++GK A
Sbjct: 393 KLTPRMEHYACVVDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYA 452
Query: 567 AENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
AE+++ P + +LL NIY+S G+W+E A+ + MKE V K G SWIEI+ +H+
Sbjct: 453 AEHLILSAPEKPSPYILLANIYSSKGRWKERAKTIKRMKEMCVAKETGISWIEIENNLHS 512
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 172/371 (46%), Gaps = 45/371 (12%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISAC 90
+V D L R W + S L + LY ++L F TN + P+ TY + AC
Sbjct: 115 QVFDEMLERNVITWT-AIISGLVQSELYRDSLRLF---VEMTNGLVEPNSLTYLSSLMAC 170
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
S L++L+ G ++H + Q D + + +++MY KCGS+ D +F+ Q + VS T
Sbjct: 171 SGLQALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMT 230
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
++AG +QNG E A++ +V+ML++G D +++ +GLG+Q+H+ VIK
Sbjct: 231 IILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKR 290
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
GS+ N LI MY+K + D+ VFS + + SW SMI F++
Sbjct: 291 SFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFAR----------- 339
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+ + A+ L+ EM + + P +T SLL AC+ + +GM
Sbjct: 340 -----------------HGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGM 382
Query: 331 -------QIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
++H + Y+ C + +AG L + + KPD + + ++G
Sbjct: 383 EFLKSMTEVHKLTPRMEHYA----CVVDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLG 438
Query: 384 ACAAMASLEMG 394
AC EMG
Sbjct: 439 ACGIHGDPEMG 449
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 190/462 (41%), Gaps = 71/462 (15%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
+L A ++ D R W+ + S K ++ F +Q+ +R+ +T +
Sbjct: 7 VLTDAAKLFDEMPMRDTVSWNI-MISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTI 65
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+SAC + + VH + + Q + + N ++ Y KCG VFDEM +RNV
Sbjct: 66 LSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNV 125
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
++WTA+I+G Q+ ++ L+V+M + P+ T+ S + ACSGL + G Q+H
Sbjct: 126 ITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQIHGR 185
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
V K S ++AL+ MY+K + D +F S + D
Sbjct: 186 VWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKV------------------ 227
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
S I+AG A EAM F +M + D V ++L + SL
Sbjct: 228 ----------SMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSL 277
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQ--HQAGEL------------------------- 359
G QIHS +IK+ F SN V N ++ + G+L
Sbjct: 278 GLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAF 337
Query: 360 ---------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL---HCYIMKTGLA 407
+L+ M +P +TF ++ AC+ + +E G + + K
Sbjct: 338 ARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPR 397
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++ + ++DM + G L A+ + PDV+ W +L+
Sbjct: 398 MEHYAC--VVDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALL 437
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/584 (29%), Positives = 295/584 (50%), Gaps = 69/584 (11%)
Query: 84 ADLISACSSLRSLQLGRKVHDHIL---SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+L+ ++ +SL+ G+ +H ++ + D N ++N+Y KCG + AR +FD
Sbjct: 27 VNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDR 86
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGL 199
M QRNVVSW+A++ G G+ + L+ ++ P+++ F ++ C+ V
Sbjct: 87 MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+Q H +++KS H +NALI MY++ + A + ++ D+ S+
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSY--------- 197
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
N+I++ + EA + M D +I D +T S+L
Sbjct: 198 -------------------NSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGL 238
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNV---------------------------------- 345
C L G+QIH+ ++K G +V
Sbjct: 239 CAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAW 298
Query: 346 -PVCNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
V A LQ+ E LF+ M T+P+ TF ++ ACA++ +L G LH I+
Sbjct: 299 TAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVM 358
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + V N L++MY K G++ S+ +F+ M + DV++W+++I GY+ G G++AL +
Sbjct: 359 SGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLV 418
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F+ M S+G PN+VT +GVL+AC H+ LV+EG + + ++ + P E +C+V LL
Sbjct: 419 FQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLG 478
Query: 524 RAGRVHEAEDFINQMA-FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + EAE+F+ D+V W++LL +C H N ++GK+ E ++++DP +
Sbjct: 479 RAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYT 538
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
LL N++A + KW+ V ++ MKER ++K PG SW++I+ H
Sbjct: 539 LLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHV 582
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 152/298 (51%), Gaps = 11/298 (3%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
+ C +D A +++D+ DD++ ++ + S+L + EA + +
Sbjct: 173 YSRCFHVDSAMQILDTV--PGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVI-WDS 229
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
TY ++ C+ +R LQLG ++H +L + D + + +++ YGKCG + +AR FD
Sbjct: 230 VTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDG 289
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ RNVV+WTA++ QNG + L+ +M P++FTF ++ AC+ L + G
Sbjct: 290 LRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYG 349
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
LH ++ S +HLI NALI MY+K I ++NVFS++ +D+ +W +MI G+S
Sbjct: 350 DLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHH 409
Query: 261 DFART---VFNEM----ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
+ VF +M E PN ++ +++ + E F ++ + + GL
Sbjct: 410 GLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGL 467
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 281/549 (51%), Gaps = 64/549 (11%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+A + + +++ Y CG++ AR VFD + ++ V+WTAM++ S+N A+ + +M
Sbjct: 184 NAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMR 243
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+G P+ F S+++A L LG+ +H +K+ + AL+ MY K I
Sbjct: 244 MAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIE 303
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
DA VF I D+ W +I +A++ NE +
Sbjct: 304 DARTVFEIIPHDDVILWSFLIS-----RYAQSYQNE-----------------------Q 335
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
A +F M ++P+ ++ +L AC + L G QIH+ +IK G+ S + V NA++
Sbjct: 336 AFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMD 395
Query: 354 HQAG--------ELFR----------------------------LFSLMLASQTKPDHIT 377
A E+FR +F M A+ +T
Sbjct: 396 VYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVT 455
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
F+ V+ ACA AS++ Q+H I K+ D V N L+D Y KCG + A ++F +
Sbjct: 456 FSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESII 515
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DVVSW+++I GYA G +AL+LF RM S +PN VT V +L+ C GLV +GL
Sbjct: 516 QCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLS 575
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
L+ M ++ I P+ + +C+V LL RAGR+++A FI + +VW++LL+SC H
Sbjct: 576 LFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVH 635
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
NV +GK +AE +L+I+P + VLL N+YA++G ++VA L SM+ GV+K G SW
Sbjct: 636 KNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSW 695
Query: 618 IEIQTKIHA 626
+EI+ ++HA
Sbjct: 696 VEIKGEVHA 704
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 247/542 (45%), Gaps = 33/542 (6%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSK--CQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
A L+ C + + GR VH ++ Q D N +LN+Y K G L AR +FD M
Sbjct: 51 ARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGM 110
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+RN+VS+ ++ G + G A L+ ++ + G + F +I++ + GL
Sbjct: 111 PERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTC 170
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+HA K H + ++LI Y+ + A VF I KD +W +M+ +S+ D
Sbjct: 171 CIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSEND 230
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC- 320
N +A + S A A+ L S + + + G V++L C
Sbjct: 231 IPEDALNTFSKMRMAGAKPNPFVLTSVLKA--AVCLSSAVLGKGI--HGCAVKTL---CD 283
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-----------------QAGELFRLF 363
T P + G + K G+ + I+ H Q + F +F
Sbjct: 284 TEP---HVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMF 340
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
M+ S P+ + + V+ ACA +A L++G Q+H ++K G ++FV N LMD+Y KC
Sbjct: 341 LRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKC 400
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
++ ++ E+F + D + VSW+++IVGY Q G E+AL +F+ MR++ V VT VL
Sbjct: 401 RNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVL 460
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
AC++ ++ +Q++ +++ T S ++D A+ G + +A + D
Sbjct: 461 RACANTASIKHTVQIHSLIEKSTFNNDTIVCNS-LIDTYAKCGCIRDALKVFESI-IQCD 518
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGKWEEVARLMG 602
+V W ++++ HG + K D N V L ++ S+G + L
Sbjct: 519 VVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFN 578
Query: 603 SM 604
SM
Sbjct: 579 SM 580
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 190/414 (45%), Gaps = 66/414 (15%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
DA+ LC + A V D + + W + S + ++ +AL F ++ +
Sbjct: 193 DAYSLCGAVSHARCVFDGIIWKDAVTWT-AMVSCYSENDIPEDALNTFSKMRM-AGAKPN 250
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P ++ A L S LG+ +H + + C + + +L+MY KCG +EDAR VF+
Sbjct: 251 PFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFE 310
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+P +V+ W+ +I+ +Q+ Q A E++++M++S ++P++F+ +++AC+ + + L
Sbjct: 311 IIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDL 370
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+Q+H VIK + S L NAL+ +Y K + ++ +F S+ + SW ++I G+ +
Sbjct: 371 GQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQ 430
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
FA +A+S+F EM ++ +T S+L A
Sbjct: 431 SGFAE----------------------------DALSVFQEMRAAHVLSTQVTFSSVLRA 462
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI---------------------------- 351
C + S+ +QIHS I K F ++ VCN++
Sbjct: 463 CANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSW 522
Query: 352 --------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
L +A + LF+ M S TKP+ +TF ++ C + + G L
Sbjct: 523 NAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSL 576
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 344 NVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
NVP+ NA LQ EL L + K D ++ C A G +H
Sbjct: 17 NVPLRRNLAANAALQWLDDELASL------ALPKLDSYACARLLQRCIARGDARAGRAVH 70
Query: 399 CYIMKTG--LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+++ G LD F N L+++Y K G L +AR LF+ M + ++VS+ +L+ GYA G
Sbjct: 71 ARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGG 130
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVL 483
EEA LFRR++ G NH L +L
Sbjct: 131 FEEAAGLFRRLQREGHEVNHFVLTTIL 157
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/594 (31%), Positives = 300/594 (50%), Gaps = 73/594 (12%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP T+ ++ AC SL G+KVH + + D + ++++Y + G L+ A
Sbjct: 120 LRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAH 176
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VF +MP ++V SW AMI+G QNG A+ + +M G+ D T SI+ C+
Sbjct: 177 KVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSD 236
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
V G +H HV+K S + NALI MY+KF R+ DA
Sbjct: 237 DVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA-------------------- 276
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+ VF++ME +L SWN+IIA ++ + A+ F M + PD LTV S
Sbjct: 277 --------QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFY-SNVPVCNAILQHQA------------------ 356
L + I ++I++ + +V + NA++ A
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK 388
Query: 357 ------------------GELFRLFSLMLASQ-TKPDHITFNDVMGACAAMASLEMGTQL 397
E +++M + T P+ T+ ++ A + + +L+ G ++
Sbjct: 389 DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKI 448
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H ++K L LDVFV L+D+Y KCG L A LF + V W+++I G G
Sbjct: 449 HAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRG 508
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
EEAL+LF+ M + V+ +H+T V +L+ACSH GLV+EG + + IMQ EYGI P+ + C
Sbjct: 509 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+VDLL RAG + +A + + M D +W +LL++CK +GN ++G A++ +L++D N
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 628
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK--IHASGN 629
VLL NIYA++ KWE V ++ ++RG+RK PG S + + +K + +GN
Sbjct: 629 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGN 682
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 134/577 (23%), Positives = 254/577 (44%), Gaps = 89/577 (15%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
AD + +S ++ +K+H +L + VL ++N+Y G + +R FD + +
Sbjct: 23 ADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK 82
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQ----SGLMPDQFTFGSIIRACSGLCCVGL 199
+N+ SW ++I+ + G+ + A+ Q+ L PD +TF I++AC L
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD--- 139
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+++H V K + +L+ +Y+++ + A VF + KD+ SW +MI GF
Sbjct: 140 GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGF-- 197
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANE--AMSLFSEMGDRELIPDGLTVRSLL 317
C N N A+ + + M + D +TV S+L
Sbjct: 198 ----------------------------CQNGNAAGALGVLNRMKGEGVKMDTITVASIL 229
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QHQAGEL- 359
C + G+ IH +++K G S+V V NA++ Q + +L
Sbjct: 230 PVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLV 289
Query: 360 ------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
R F M +PD +T + + ++ + + ++
Sbjct: 290 SWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFV 349
Query: 402 MKTG-LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++ L DV + N L++MY K G + A +F+ + D +SW++L+ GY Q G EA
Sbjct: 350 IRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEA 409
Query: 461 LKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV 518
+ + M PN T V ++ A SHVG +++G++++ ++++N + +C+
Sbjct: 410 IDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL--DVFVATCL 467
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL----KID 574
+DL + GR+ +A ++ D V W +++AS HG + + +++L K D
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIPRDTS-VPWNAIIASLGIHGRGEEALQLFKDMLAERVKAD 526
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSM-KERGVR 610
+L+ C + SG +E + M KE G++
Sbjct: 527 HITFVSLLSAC---SHSGLVDEGQKCFDIMQKEYGIK 560
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A V D R+ W+ L + + L +EA+ A++ ++ + T+ +I A
Sbjct: 378 AHTVFDQLPRKDTISWN-TLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
S + +LQ G K+H ++ + D + ++++YGKCG LEDA +F E+P+ V W
Sbjct: 437 SHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWN 496
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
A+IA +G+ A++L+ ML + D TF S++ ACS V G++ +++
Sbjct: 497 AIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCF-DIMQK 555
Query: 211 EHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
E+G L ++ + + + A+ + ++ + D + WG+++
Sbjct: 556 EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALL 602
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 278/536 (51%), Gaps = 18/536 (3%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
++VH I+ D + +++ + C + A VF+++ NV + +I QN
Sbjct: 40 KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQN 99
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
Q A + M ++GL D FT+ +++AC+G + + +H HV K L
Sbjct: 100 SQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVP 159
Query: 220 NALIAMYTK--FDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPN 274
N+LI Y+K + A +F + KD+ SW SMI G K L AR +F+EM +
Sbjct: 160 NSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERD 219
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
SWNTI+ G ++A +LF +M +R ++ T+ S C M++
Sbjct: 220 AVSWNTILDGYVKAGEMSQAFNLFEKMPERNVV-SWSTMVSGYCKTGD-------MEMAR 271
Query: 335 YIIKKGFYSNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+ K + N+ I+ + A E L++ M A+ KPD T ++ ACA
Sbjct: 272 MLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESG 331
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
L +G ++H I K + V V N L+DMY KCG + A +FN M D+VSW+ ++
Sbjct: 332 LLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQ 391
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
G A G GE+A++LF +M+ G +P+ VTL+ +L AC+H G V++GL + M+ ++GI+
Sbjct: 392 GLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIV 451
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
P E C++DLL R GR+ EA + M + + V+W +LL +C+ H V + ++ +
Sbjct: 452 PHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDR 511
Query: 570 ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ ++ ++ +L NI+A++G W VA + MK GV+K G S IE+ ++H
Sbjct: 512 LITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVH 567
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 222/509 (43%), Gaps = 73/509 (14%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFD--LFSSLCKQNLYN----EALVAFDFLQNNT 74
AF LC ++ A V F+ I D + L+++L + ++ N +A F +Q N
Sbjct: 64 AFSLCHQMNLAVNV-------FNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNG 116
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL--E 132
F TY L+ AC+ L + +H H+ D + N +++ Y KCG L
Sbjct: 117 LFADN-FTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVN 175
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
A +F EM ++++VSW +MI G + G A +L+ +M +
Sbjct: 176 YAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERD---------------- 219
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+S N ++ Y K + A+N+F + +++ SW +
Sbjct: 220 -----------------------AVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWST 256
Query: 253 MIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
M+ G+ K ++ AR +F++M NL +W II+G A A EA +L+++M L PD
Sbjct: 257 MVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPD 316
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLML 367
T+ S+L AC L G ++H+ I K +V V NA++ A G + + S+
Sbjct: 317 DGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSI-F 375
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ D +++N ++ A E QL + + G D + ++ G +
Sbjct: 376 NEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVD 435
Query: 428 SARELFNFMED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV---TL 479
FN ME P + + +I + G EEA FR ++S + PN V TL
Sbjct: 436 QGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEA---FRLVQSMPMEPNDVIWGTL 492
Query: 480 VGVLTACSHVGLVEEGL-QLYRIMQNEYG 507
+G + V L E+ L +L + Q++ G
Sbjct: 493 LGACRVHNAVPLAEKVLDRLITLEQSDPG 521
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/594 (31%), Positives = 300/594 (50%), Gaps = 73/594 (12%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP T+ ++ AC SL G+KVH + + D + ++++Y + G L+ A
Sbjct: 120 LRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAH 176
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VF +MP ++V SW AMI+G QNG A+ + +M G+ D T SI+ C+
Sbjct: 177 KVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSD 236
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
V G +H HV+K S + NALI MY+KF R+ DA
Sbjct: 237 DVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA-------------------- 276
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+ VF++ME +L SWN+IIA ++ + A+ F M + PD LTV S
Sbjct: 277 --------QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFY-SNVPVCNAILQHQA------------------ 356
L + I ++I++ + +V + NA++ A
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK 388
Query: 357 ------------------GELFRLFSLMLASQ-TKPDHITFNDVMGACAAMASLEMGTQL 397
E +++M + T P+ T+ ++ A + + +L+ G ++
Sbjct: 389 DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKI 448
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H ++K L LDVFV L+D+Y KCG L A LF + V W+++I G G
Sbjct: 449 HAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRG 508
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
EEAL+LF+ M + V+ +H+T V +L+ACSH GLV+EG + + IMQ EYGI P+ + C
Sbjct: 509 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
+VDLL RAG + +A + + M D +W +LL++CK +GN ++G A++ +L++D N
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 628
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK--IHASGN 629
VLL NIYA++ KWE V ++ ++RG+RK PG S + + +K + +GN
Sbjct: 629 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGN 682
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 134/577 (23%), Positives = 254/577 (44%), Gaps = 89/577 (15%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
AD + +S ++ +K+H +L + VL ++N+Y G + +R FD + +
Sbjct: 23 ADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK 82
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQ----SGLMPDQFTFGSIIRACSGLCCVGL 199
+N+ SW ++I+ + G+ + A+ Q+ L PD +TF I++AC L
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD--- 139
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+++H V K + +L+ +Y+++ + A VF + KD+ SW +MI GF
Sbjct: 140 GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGF-- 197
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANE--AMSLFSEMGDRELIPDGLTVRSLL 317
C N N A+ + + M + D +TV S+L
Sbjct: 198 ----------------------------CQNGNAAGALGVLNRMKGEGVKMDTITVASIL 229
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QHQAGEL- 359
C + G+ IH +++K G S+V V NA++ Q + +L
Sbjct: 230 PVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLV 289
Query: 360 ------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
R F M +PD +T + + ++ + + ++
Sbjct: 290 SWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFV 349
Query: 402 MKTG-LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
++ L DV + N L++MY K G + A +F+ + D +SW++L+ GY Q G EA
Sbjct: 350 IRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEA 409
Query: 461 LKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCV 518
+ + M PN T V ++ A SHVG +++G++++ ++++N + +C+
Sbjct: 410 IDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL--DVFVATCL 467
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL----KID 574
+DL + GR+ +A ++ D V W +++AS HG + + +++L K D
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIPRDTS-VPWNAIIASLGIHGRGEEALQLFKDMLAERVKAD 526
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSM-KERGVR 610
+L+ C + SG +E + M KE G++
Sbjct: 527 HITFVSLLSAC---SHSGLVDEGQKCFDIMQKEYGIK 560
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A V D R+ W+ L + + L +EA+ A++ ++ + T+ +I A
Sbjct: 378 AHTVFDQLPRKDTISWN-TLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
S + +LQ G K+H ++ + D + ++++YGKCG LEDA +F E+P+ V W
Sbjct: 437 SHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWN 496
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
A+IA +G+ A++L+ ML + D TF S++ ACS V G++ +++
Sbjct: 497 AIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCF-DIMQK 555
Query: 211 EHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
E+G L ++ + + + A+ + ++ + D + WG+++
Sbjct: 556 EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALL 602
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 271/517 (52%), Gaps = 48/517 (9%)
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI---IRACSGLCCVGLGRQLH 204
SW I + GQ AI L++QM ++ + P S+ +++C+GL L LH
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 389
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
A I+S + + NAL+ + K + + S + + R
Sbjct: 390 ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLES--------AAYESMR 441
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF+EM + SWNT+I G A EA+S+ EM +PD T+ ++L
Sbjct: 442 KVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECA 501
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV--------------------------CNAILQHQ--A 356
+ +GM +H Y IK GF ++V V C+A+L + A
Sbjct: 502 DIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLA 561
Query: 357 G--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
G E +F ML + +P +TF+ ++ A ++ L +G QLH Y+++
Sbjct: 562 GYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFND 621
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++F+ + L+DMY KCG++ AR +FN ++ PD+VSW+++I+GYA G EA LF RM
Sbjct: 622 NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERME 681
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
V+PNH+T + VLTACSH GLV+ G + + M N+YG +P+ E + + D L RAG +
Sbjct: 682 LGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDL 741
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA +FI++M VW +LL +C+ H N + + A+ I +++P + + V+L N+Y
Sbjct: 742 DEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMY 801
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++SG+W E A+L SM+ +G++K P SWIE++ K+H
Sbjct: 802 SASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLH 838
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 163/362 (45%), Gaps = 41/362 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST + + C+ ++ G VH + + + D + + +++MY C ++ + VFD
Sbjct: 491 STVLPIFAECADIKR---GMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 547
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ V W +M+AG +QNG A+ ++ +MLQ+G+ P TF S+I A L + LG
Sbjct: 548 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 607
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+QLHA++I++ ++ ++LI MY K + A VF+ I DI SW +MI G++
Sbjct: 608 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYA-- 665
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ P EA LF M + P+ +T ++L AC
Sbjct: 666 ---------LHGPT-----------------TEAFVLFERMELGNVKPNHITFLAVLTAC 699
Query: 321 TSPLSLYQGMQ-IHSYIIKKGFYSNVPVCNAILQH--QAGELFRLFSLMLASQTKPDHIT 377
+ + G + +S + GF ++ C A+ +AG+L ++ + + KP
Sbjct: 700 SHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSV 759
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG---LMDMYVKCGSLGSARELFN 434
++ ++ AC + T L + K L+ M L +MY G A +L
Sbjct: 760 WSTLLRAC----RVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRK 815
Query: 435 FM 436
M
Sbjct: 816 SM 817
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 173/444 (38%), Gaps = 95/444 (21%)
Query: 69 FLQNNTNFRIRPSTYADLISA---CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM- 124
FLQ + R S A L +A C+ L L +H + S D N +LN+
Sbjct: 352 FLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLC 411
Query: 125 ---------YGKCG----------SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+G G + E R VFDEM +R+ VSW +I GC+++ + A
Sbjct: 412 IKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEA 471
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+ + +M + G MPD FT +++ + + G +H + IK+ + + ++LI M
Sbjct: 472 LSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDM 531
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
Y ++ + VF S + D W N+++AG
Sbjct: 532 YANCTQMDYSMKVFDSFSDCDAVLW----------------------------NSMLAGY 563
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A + EA+ +F M + P +T SL+ A + L G Q+H+Y+I+ F N+
Sbjct: 564 AQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNI 623
Query: 346 PVCNAI------------------------------------LQHQAGELFRLFSLMLAS 369
+ +++ L E F LF M
Sbjct: 624 FISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELG 683
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQ-LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
KP+HITF V+ AC+ ++ G + + + G + L D + G L
Sbjct: 684 NVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLD- 742
Query: 429 ARELFNFMED----PDVVSWSSLI 448
E +NF+ + P WS+L+
Sbjct: 743 --EAYNFISEMKIKPTSSVWSTLL 764
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 146/293 (49%), Gaps = 16/293 (5%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D + +V DSF +W+ + + + EAL F + R
Sbjct: 530 DMYANCTQMDYSMKVFDSFSDCDAVLWN-SMLAGYAQNGSVEEALGIFRRMLQ-AGVRPV 587
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P T++ LI A +L L+LG+++H +++ ++ + + + +++MY KCG+++ AR VF+
Sbjct: 588 PVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFN 647
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ ++VSWTAMI G + +G A L+ +M + P+ TF +++ ACS V
Sbjct: 648 GIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDN 707
Query: 200 GRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMI-- 254
G + + + + +++G L AL + + +A+N S + K +S W +++
Sbjct: 708 GWK-YFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA 766
Query: 255 -----DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA-NEAMSLFSEM 301
+ + A+ +F E+E ++ S + I++ + S S NEA L M
Sbjct: 767 CRVHKNTVLAEEVAKKIF-ELEPKSMGS-HVILSNMYSASGRWNEAAQLRKSM 817
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/496 (31%), Positives = 270/496 (54%), Gaps = 38/496 (7%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A + + + N + ++I + + A+ ++ +ML + PD+++F +++AC+
Sbjct: 63 AHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAA 122
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
C GRQ+H +KS+ + + +N LI +Y + A V + +D SW S+
Sbjct: 123 FCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSL 182
Query: 254 IDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+ + ++ AR +F+EME N+ SWN +I+G A+ EA +F M + D
Sbjct: 183 LSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMP----VKDV 238
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLA-S 369
++ +++ A Y++V N +L+ +F++ML S
Sbjct: 239 VSWNAMVTA----------------------YAHVGCYNEVLE--------VFNMMLDDS 268
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+PD T +V+ ACA++ SL G +H YI K G+ ++ FV L+DMY KCG + A
Sbjct: 269 AERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKA 328
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
E+F DV +W+S+I G + G G++AL++F M G +PN +T +GVL+AC+HV
Sbjct: 329 LEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 388
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
GL+++ +L+ +M + YGI PT E C+VDLL R G+ EAE+ +N++ D+ ++ +S
Sbjct: 389 GLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLES 448
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LL +CK G ++ +R A +L+ +P S+ V + N+YAS G+W+E + G M+ V
Sbjct: 449 LLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKMRAERV 508
Query: 610 RKVPGQSWIEIQTKIH 625
+K PG S IE+ +H
Sbjct: 509 KKNPGCSMIEVDGVVH 524
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 154/311 (49%), Gaps = 11/311 (3%)
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+ +A ++ N +ESPN + N++I A+ S A+++F EM + PD + +L A
Sbjct: 60 VSYAHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKA 119
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-HQAGELFRLFSLMLASQTKPDHITF 378
C + +G QIH +K ++V V N ++ + F + +L D +++
Sbjct: 120 CAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSW 179
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
N ++ A +E L + + + F+++G Y G + ARE+F+ M
Sbjct: 180 NSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISG----YAAAGLVKEAREVFDSMPV 235
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
DVVSW++++ YA GC E L++F M S RP+ TLV VL+AC+ +G + +G +
Sbjct: 236 KDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQG-E 294
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ +++GI + +VD+ ++ G++ +A + + D+ W S++ H
Sbjct: 295 WVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTS-KRDVSTWNSIITGLSVH 353
Query: 558 GNVDVGKRAAE 568
G +GK A E
Sbjct: 354 G---LGKDALE 361
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 181/465 (38%), Gaps = 90/465 (19%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
++ ++ AC++ + GR++H + S D + N ++N+YG+ G E AR V D M
Sbjct: 112 SFTFVLKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRM 171
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R+ VSW ++++ G A L+ +M + + F SG GL +
Sbjct: 172 PVRDAVSWNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMI-------SGYAAAGLVK 224
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTK---FDRILDAWNVF--SSIARKD---------- 246
+ V S ++S NA++ Y ++ +L+ +N+ S R D
Sbjct: 225 EAR-EVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSA 283
Query: 247 ----------------ITSWGSMIDGF------------SKLDFARTVFNEMESPNLASW 278
I G I+GF K+D A VF + ++++W
Sbjct: 284 CASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTW 343
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N+II G++ +A+ +FSEM P+G+T +L AC L Q ++ + +
Sbjct: 344 NSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKL--FEMM 401
Query: 339 KGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
Y P C L + G+ L+ I ++GAC LE
Sbjct: 402 NSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQ 461
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
++ ++++ N E V S+L YA
Sbjct: 462 AERIANRLLES-----------------------------NPRESSGYVQMSNL---YAS 489
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
G +EA+++ +MR+ V+ N + + H L EGL++
Sbjct: 490 HGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVVHEFLAGEGLRI 534
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
L+ +A EV DS + W+ + ++ YNE L F+ + +++ R T ++
Sbjct: 222 LVKEAREVFDSMPVKDVVSWN-AMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNV 280
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+SAC+SL SL G VH +I + + + +++MY KCG ++ A VF + +R+V
Sbjct: 281 LSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDV 340
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+W ++I G S +G A+E++ +M+ G P+ TF ++ AC+ + + R+L
Sbjct: 341 STWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKL 397
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYV---KCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
Q H +++KTGL D F + L+ + ++ A + N +E P+ + +S+I YA
Sbjct: 27 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIESPNGFTHNSVIRAYA 86
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
E AL +FR M V P+ + VL AC+ EEG Q++ + ++
Sbjct: 87 NSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMKS-DLVTDV 145
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ ++++ R+G A +++M D V W SLL++ G V+ + + +
Sbjct: 146 FVENTLINVYGRSGYFEIARKVLDRMPV-RDAVSWNSLLSAYLDKGLVEEARALFD---E 201
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
++ N + + + YA++G +E + SM + V
Sbjct: 202 MEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDV 238
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 283/549 (51%), Gaps = 64/549 (11%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+A + + +++ Y CG + DAR VFD + ++ V+WTAM++ S+N ++++ +M
Sbjct: 565 NAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMR 624
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ + F S++RA L V LG+ +HA +K+ + + AL+ MY K I
Sbjct: 625 VAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIE 684
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
DA F + D+ W MI + A C+ +
Sbjct: 685 DARLAFEMVTNDDVILWSLMISRY----------------------------AQCNQNEQ 716
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
A LF M + P+ ++ S+L AC + L G QIH++ IK G S + V NA++
Sbjct: 717 AFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALID 776
Query: 354 HQAG--------ELFR----------------------------LFSLMLASQTKPDHIT 377
A E+F +F M A+ +T
Sbjct: 777 LYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVT 836
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
++ V+ ACA+ AS+ Q+HC I K+ D V N L+D Y KCG + ARE+F ++
Sbjct: 837 YSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLK 896
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
+ D+VSW+++I GYA G A +LF M + ++ N +T V +L+ C GLV +GL
Sbjct: 897 ECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLS 956
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
L+ M+ ++GI P+ E +C+V LL RAGR+++A +FI + +VW++LL+SC H
Sbjct: 957 LFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVH 1016
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
NV++G+ +AE +L+I+P + VLL N+Y+++G ++VA SM+ GVRK PG SW
Sbjct: 1017 KNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSW 1076
Query: 618 IEIQTKIHA 626
+EI+ ++HA
Sbjct: 1077 VEIKGEVHA 1085
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/567 (26%), Positives = 254/567 (44%), Gaps = 79/567 (13%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSK--CQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
YA L+ C + + GR VH H++ S + D N +LNMY K G A VFD
Sbjct: 431 YARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDG 490
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P+RN+VS+ ++ G + G+ A L+ ++ G +QF ++++ + +GL
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+HA K H + +ALI Y+ + DA VF I KD +W +M+ +S+
Sbjct: 551 WGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSEN 610
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLC 318
D C + +FS+M +L P LT
Sbjct: 611 D--------------------------C--PENTLQIFSKMRVAVSKLNPFALTSVLRAA 642
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------------------------- 353
C S + L +G IH+ +K + + V A+L
Sbjct: 643 VCLSSVVLGKG--IHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVIL 700
Query: 354 -----------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+Q + F LF M+ S P+ + + V+ ACA M L++G Q+H + +
Sbjct: 701 WSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAI 760
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K G ++FV N L+D+Y KC + S+ E+F+ + D + VSW+++IVGY++ G GE AL
Sbjct: 761 KIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALS 820
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+FR MR++ V VT VL AC+ + Q++ +++ T S ++D
Sbjct: 821 VFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNS-LIDSY 879
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR----AAENILKIDPTNS 578
A+ G + +A + + + D+V W ++++ HG + + ++N +K N
Sbjct: 880 AKCGCIRDAREIFETLK-ECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIK---AND 935
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMK 605
V L ++ S+G + L SM+
Sbjct: 936 ITFVALLSVCGSTGLVSQGLSLFDSMR 962
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTG-LA-LDVFVMNGLMDMYVKCGSLGSARE 431
D + ++ C A G +H +++++G LA LD+F N L++MY K G GSA
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
+F+ + + ++VS+ +L+ G+A G EEA LF+R+R G N L VL
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVL 538
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/596 (30%), Positives = 302/596 (50%), Gaps = 10/596 (1%)
Query: 44 DIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D++ F+ L L ++ + L+ TN R TYA ISA S L ++G +
Sbjct: 76 DLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLL 135
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H H + + + + I+++Y K E AR VFD MP+R+ V W MI+G S+N
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYF 195
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
+I ++V ML GL D T +++ A + L LG + K S + L
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWN 279
I++Y+K + +F I + D+ S+ +MI G++ + + A T+F E+ + +
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+ + G+ + L + + L + S+ A T+ +Q + +
Sbjct: 316 STLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE 375
Query: 340 GFYSNVPVCNAILQ--HQAGELFRLFSLM--LASQTKPDHITFNDVMGACAAMASLEMGT 395
++ NA++ Q G R SL + Q P+ +T ++ ACA + +L +G
Sbjct: 376 SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGK 435
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
+H I L +V+V L+DMY KCGS+ AR+LF+ M D +VV+W+++I GY G
Sbjct: 436 WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHG 495
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G+EALKLF M SG+ P VT + +L ACSH GLV EG +++ M N YG P E
Sbjct: 496 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHY 555
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VD+L RAG++ A +FI +M + VW +LL +C H N ++ A++ + ++DP
Sbjct: 556 ACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDP 615
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI--QTKIHASGN 629
N VLL NIY++ + + A + +K+R + K PG + IEI Q + SG+
Sbjct: 616 ENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGD 671
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 205/447 (45%), Gaps = 15/447 (3%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSI 187
G++ R +F+++ + ++ + +I G S NG ++I LY + ++ L PD FT+
Sbjct: 60 GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFA 119
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
I A S L +G LHAH I S+L +A++ +Y KF R A VF + +D
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179
Query: 248 TSWGSMIDGFSKLDF---ARTVFNEMESPNLA----SWNTIIAGVASCSNANEAMSLFSE 300
W +MI GFS+ + + VF +M L+ + T++ VA M +
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGEL 359
+ L D + L+ + +G + I + S N + H+
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
LF +LAS + + T ++ L++ + +K G+ L V L +
Sbjct: 300 VTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTV 359
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y + + AR+LF+ + + SW+++I GY Q G + A+ LF+ M + PN VT+
Sbjct: 360 YCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTV 418
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+L+AC+ +G + G ++ ++++E + + +VD+ A+ G + EA + M
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSER-LESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRA 566
D ++V W +++ HG+ GK A
Sbjct: 478 -DKNVVTWNAMITGYGLHGH---GKEA 500
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+ ++ G+ D+ + L + G++ R+LFN + PD+ ++ LI G++ G
Sbjct: 32 QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91
Query: 456 CGEEALKLFRRMR-SSGVRPNHVTLVGVLTACSHVGLVEEG--LQLYRIMQNEYGIIPTR 512
+ ++ L+ +R + +RP++ T ++A S + G L + I+ G+
Sbjct: 92 LPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD---GVASNL 148
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S +VDL + R A + M + D V+W ++++
Sbjct: 149 FVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMIS 187
>gi|413938143|gb|AFW72694.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 663
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/580 (31%), Positives = 288/580 (49%), Gaps = 65/580 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ AC+ LR + GR VH L++ DA + N I++MY +C + A VF +
Sbjct: 111 TFTFAAKACAGLRLRRHGRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVAL 170
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R VSW +I GC ++G+ A+E++ M+ G+ D+ + S++ AC+ + GR
Sbjct: 171 PSRTTVSWNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGR 230
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMIDGFSKL 260
+H + G ++ +NALI MY K + DA VF + KD+ SW MI +
Sbjct: 231 AVHRLAVVRGLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAY--- 287
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCA 319
V N+ +A++A +L SEM E P+ +T+ LL A
Sbjct: 288 -----VLND--------------------HASKAFALGSEMLVSSEAQPNAVTMAHLLSA 322
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
C S LS H+ I+ G S++ V A++
Sbjct: 323 CASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVIDMVVEKGSRRTETWN 382
Query: 353 --------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ Q + LF MLA +PD T V+ A A A L +HC ++
Sbjct: 383 AAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVR 442
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + + GL+D+Y K G LG A ELF + + DVV+W+++I GY G + A+ L+
Sbjct: 443 GCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLY 502
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM GV PN VT+ +L +CSH G+V+EGL+L+ M +G++P E C+VD+L R
Sbjct: 503 SRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGLMPNAEHYLCLVDMLGR 562
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AGR+ EA I M F+ + VW SLL +C H NV+ G+ AA+++ +++P N VLL
Sbjct: 563 AGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLFELEPDNVGNYVLL 622
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
+YA++ +W +V L M+ + K PG ++ ++++
Sbjct: 623 GKVYAAAERWSDVQHLRRVMEGMDLHKDPGYCVVDAKSEV 662
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 220/524 (41%), Gaps = 75/524 (14%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWT-AMIAGCSQNGQENAAIELYVQMLQSGLMP 179
+L Y CG DA+ + +MPQ VS + ++ S G A+ LY QM
Sbjct: 52 LLYSYCACGCPFDAQNLLAQMPQPASVSVSNTLLRSYSGLGFHRQALALYSQMRHF---- 107
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
D TF +AC+GL GR +H + + GS QNA+++MY + + A VF
Sbjct: 108 DHLTFTFAAKACAGLRLRRHGRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVF 167
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
++ + S WNT+I G A A+ +F
Sbjct: 168 VALPSRTTVS----------------------------WNTVITGCVKDGRAERALEVFE 199
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA--------- 350
M DR + D +V S+L AC L+ G +H + +G V V NA
Sbjct: 200 TMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAVKNALIDMYGKCG 259
Query: 351 ----------------------------ILQHQAGELFRLFSLML-ASQTKPDHITFNDV 381
+L A + F L S ML +S+ +P+ +T +
Sbjct: 260 SLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQPNAVTMAHL 319
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ ACA++ S + H ++ GL D+ V L+D Y KCG +G ++
Sbjct: 320 LSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVI-DMVVEKGSRRT 378
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+W++ I GY Q G++AL LF+RM + VRP+ T+ V+ A + + + ++
Sbjct: 379 ETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQANNIHCC 438
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ G + + + + ++DL A+AG + A + Q + D+V W +++A HG+
Sbjct: 439 LLVR-GCLVSTDIATGLIDLYAKAGDLGVAWELF-QCLPEKDVVAWTTVIAGYGMHGHAQ 496
Query: 562 VGKRAAENILKIDP-TNSAALVLLCNIYASSGKWEEVARLMGSM 604
++++ N+ + L + + +G +E RL M
Sbjct: 497 TAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDM 540
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 113/243 (46%), Gaps = 17/243 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C + VV+ RR + W+ + S +++ +AL F + + +R
Sbjct: 356 DCYAKCGYMGVIDMVVEKGSRR-TETWNAAI-SGYTQRDQGKKALALFKRMLAES---VR 410
Query: 80 P--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P +T A +I A + L +H +L C + ++++Y K G L A +
Sbjct: 411 PDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWEL 470
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F +P+++VV+WT +IAG +G A+ LY +M++ G+MP+ T S++ +CS V
Sbjct: 471 FQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMV 530
Query: 198 GLGRQLHAHVIKSEHGSHLISQNA-----LIAMYTKFDRILDAWNVFSSIA-RKDITSWG 251
G +L HG H + NA L+ M + RI +A+ + ++ W
Sbjct: 531 DEGLRL----FNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWS 586
Query: 252 SMI 254
S++
Sbjct: 587 SLL 589
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 268/509 (52%), Gaps = 66/509 (12%)
Query: 121 ILNMYGKCGSLED---ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ M C +ED A +F+++ NV + ++I + N I +Y Q+L+
Sbjct: 45 VTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSF 104
Query: 178 -MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+PD+FTF + ++C+ L LG+Q+H H+ K H++++NALI MY KFD ++DA
Sbjct: 105 ELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDA- 163
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
VF+EM ++ SWN++++G A +A
Sbjct: 164 ---------------------------HKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
LF M D+ ++ + T+ +S Y G I Y+ +A
Sbjct: 197 LFHLMLDKTIV-----------SWTAMISGYTG--IGCYV------------------EA 225
Query: 357 GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
+ FR L + +PD I+ V+ +CA + SLE+G +H Y + G V N L
Sbjct: 226 MDFFREMQL---AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNAL 282
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
++MY KCG + A +LF ME DV+SWS++I GYA G A++ F M+ + V+PN
Sbjct: 283 IEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNG 342
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+T +G+L+ACSHVG+ +EGL+ + +M+ +Y I P E C++D+LARAG++ A +
Sbjct: 343 ITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
M D +W SLL+SC+T GN+DV A +++++++P + VLL NIYA GKWE+
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWED 462
Query: 597 VARLMGSMKERGVRKVPGQSWIEIQTKIH 625
V+RL ++ ++K PG S IE+ +
Sbjct: 463 VSRLRKMIRNENMKKTPGGSLIEVNNIVQ 491
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 64/348 (18%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ + +C+SL S LG++VH H+ + V N +++MY K L DA VFDEM
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 142 PQRNV-------------------------------VSWTAMIAGCSQNGQENAAIELYV 170
+R+V VSWTAMI+G + G A++ +
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M +G+ PD+ + S++ +C+ L + LG+ +H + + NALI MY+K
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
I A +F + KD+ SW +MI G+ A N
Sbjct: 291 VISQAIQLFGQMEGKDVISWSTMISGY----------------------------AYHGN 322
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV--- 347
A+ A+ F+EM ++ P+G+T LL AC+ +G++ ++++ + +
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD-MMRQDYQIEPKIEHY 381
Query: 348 -CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
C + +AG+L R + KPD + ++ +C +L++
Sbjct: 382 GCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
+++ I+ GL+ F++ ++D K + A LFN + +P+V ++S+I Y
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 456 CGEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
+ ++++++ +R S P+ T + +C+ +G G Q++ + ++G
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL-CKFGPRFHVVT 146
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK 564
+ ++D+ + + +A ++M ++ D++ W SLL+ G + K
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEM-YERDVISWNSLLSGYARLGQMKKAK 195
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/596 (30%), Positives = 302/596 (50%), Gaps = 10/596 (1%)
Query: 44 DIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D++ F+ L L ++ + L+ TN R TYA ISA S L ++G +
Sbjct: 76 DLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLL 135
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H H + + + + I+++Y K E AR VFD MP+R+ V W MI+G S+N
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYF 195
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
+I ++V ML GL D T +++ A + L LG + K S + L
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWN 279
I++Y+K + +F I + D+ S+ +MI G++ + + A T+F E+ + +
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+ + G+ + L + + L + S+ A T+ +Q + +
Sbjct: 316 STLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE 375
Query: 340 GFYSNVPVCNAILQ--HQAGELFRLFSLM--LASQTKPDHITFNDVMGACAAMASLEMGT 395
++ NA++ Q G R SL + Q P+ +T ++ ACA + +L +G
Sbjct: 376 SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGK 435
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
+H I L +V+V L+DMY KCGS+ AR+LF+ M D +VV+W+++I GY G
Sbjct: 436 WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHG 495
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G+EALKLF M SG+ P VT + +L ACSH GLV EG +++ M N YG P E
Sbjct: 496 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHY 555
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VD+L RAG++ A +FI +M + VW +LL +C H N ++ A++ + ++DP
Sbjct: 556 ACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDP 615
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI--QTKIHASGN 629
N VLL NIY++ + + A + +K+R + K PG + IEI Q + SG+
Sbjct: 616 ENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGD 671
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 205/447 (45%), Gaps = 15/447 (3%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-SGLMPDQFTFGSI 187
G++ R +F+++ + ++ + +I G S NG ++I LY + + + L PD FT+
Sbjct: 60 GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFA 119
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
I A S L +G LHAH I S+L +A++ +Y KF R A VF + +D
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179
Query: 248 TSWGSMIDGFSKLDF---ARTVFNEMESPNLA----SWNTIIAGVASCSNANEAMSLFSE 300
W +MI GFS+ + + VF +M L+ + T++ VA M +
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS-NVPVCNAILQHQAGEL 359
+ L D + L+ + +G + I + S N + H+
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
LF +LAS + + T ++ L++ + +K G+ L V L +
Sbjct: 300 VTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTV 359
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y + + AR+LF+ + + SW+++I GY Q G + A+ LF+ M + PN VT+
Sbjct: 360 YCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTV 418
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+L+AC+ +G + G ++ ++++E + + +VD+ A+ G + EA + M
Sbjct: 419 TSILSACAQLGALSIGKWVHGLIKSER-LESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRA 566
D ++V W +++ HG+ GK A
Sbjct: 478 -DKNVVTWNAMITGYGLHGH---GKEA 500
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
Q+ ++ G+ D+ + L + G++ R+LFN + PD+ ++ LI G++ G
Sbjct: 32 QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91
Query: 456 CGEEALKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEG--LQLYRIMQNEYGIIPTR 512
+ ++ L+ +R + +RP++ T ++A S + G L + I+ G+
Sbjct: 92 LPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD---GVASNL 148
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S +VDL + R A + M + D V+W ++++
Sbjct: 149 FVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMIS 187
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/600 (29%), Positives = 301/600 (50%), Gaps = 76/600 (12%)
Query: 59 LYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP-DAVL 117
LY+ L +FD Y L+ C+ +++ H+ + QP D+ +
Sbjct: 14 LYSHGLASFD-------------DYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFI 60
Query: 118 HNHILNMYGKCGSLEDAR-------------------------------MVFDEMPQRNV 146
HN +L++Y K G L DA+ +VFD+MP R+
Sbjct: 61 HNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDS 120
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VS+ +IA + NG A+++ V+M + G P Q++ + ++ACS L + G+Q+H
Sbjct: 121 VSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGR 180
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
++ ++ G + +NA+ MY K I D AR +
Sbjct: 181 IVVADLGENTFVRNAMTDMYAKCGDI----------------------------DKARLL 212
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F+ M N+ SWN +I+G N NE + LF+EM L PD +TV ++L A +
Sbjct: 213 FDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRV 272
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+ + KK + Q+ + + + LF ML KPD T + ++ +C
Sbjct: 273 DDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSC 332
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A +ASL G +H ++ G+ + V + L+DMY KCG AR +F M +V++W+
Sbjct: 333 AKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWN 392
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
++I+GYAQ G EAL L+ RM+ +P+++T VGVL+AC + +V+EG Q Y +E
Sbjct: 393 AMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEG-QKYFDSISE 451
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
+GI PT + +C++ LL R+G V +A D I M + + +W +LL+ C G++ +
Sbjct: 452 HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAEL 510
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
AA ++ ++DP N+ ++L N+YA+ G+W++VA + MKE+ +K SW+E+ K+H
Sbjct: 511 AASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVH 570
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 309/647 (47%), Gaps = 101/647 (15%)
Query: 51 FSSLCKQNLYN---------------EALVAFDFLQNNTNFRIRPS--TYADLISACSSL 93
F +L ++NLY+ E L A + ++ + +RP T+ + +C
Sbjct: 15 FDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDG---VRPDAVTFITALGSCGDP 71
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-RNVVSWTAM 152
SL+ G ++H ++ S+ + D + N +LNMY KCGSL A+ VF +M + RNV+SW+ M
Sbjct: 72 ESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIM 131
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ +G A+ + ML G+ + +I+ ACS V GR +H+ + S
Sbjct: 132 AGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGF 191
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
S L+ NA++ MY + + +A R VF+ M+
Sbjct: 192 ESELLVANAVMTMYGRCGAVEEA----------------------------RKVFDAMDE 223
Query: 273 P--NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
++ SWN +++ +A+ L+ M +L PD +T SLL AC+S + G
Sbjct: 224 ALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGR 280
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQA---------------------------------- 356
+H I+ NV V NA++ A
Sbjct: 281 VLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRR 340
Query: 357 --GELFRLFSLML-------ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
E LF ML + + KPD + F ++ ACA +++LE G + GL+
Sbjct: 341 LVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLS 400
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D V ++++Y KCG + AR +F+ + PDV W+++I YAQFG EALKLF R
Sbjct: 401 SDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWR 460
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEY-GIIPTRERRSCVVDLLARA 525
M GVRP+ + V +L ACSH GL ++G + M EY + T + CV DLL R
Sbjct: 461 MEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRG 520
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
GR+ EAE+F+ ++ D V W SLLA+C+ H ++ K A +L+++P + V L
Sbjct: 521 GRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALS 580
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH--ASGND 630
NIYA KW VA++ M E+GV+K G S IEI +H A+G+D
Sbjct: 581 NIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDD 627
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 210/471 (44%), Gaps = 70/471 (14%)
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY C S DA+ FD + QRN+ SWT ++A + +GQ + +M Q G+ PD T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
F + + +C + G ++H V+ S NAL+ MY K + A VF+ +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
R + N+ SW+ + A N EA+ F M
Sbjct: 121 R---------------------------TRNVISWSIMAGAHALHGNVWEALRHFRFMLL 153
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQ 355
+ + ++L AC+SP + G IHS I GF S + V NA++ +
Sbjct: 154 LGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEE 213
Query: 356 AGELFRL----------FSLMLAS-----------------QTKPDHITFNDVMGACAAM 388
A ++F +++ML++ Q +PD +T+ ++ AC++
Sbjct: 214 ARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSA 273
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+ +G LH I+ L +V V N L+ MY KCGS AR +F+ ME ++SW+++I
Sbjct: 274 EDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTII 333
Query: 449 VGYAQFGCGEEALKLFRRM-------RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
Y + EA LF++M S V+P+ + V +L AC+ V +E+G ++
Sbjct: 334 SAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSE 392
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
G+ + + VV+L + G + EA + + D+ +W +++A
Sbjct: 393 QAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIA 443
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 159/371 (42%), Gaps = 78/371 (21%)
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY D DA F ++ ++++ SW ++ F+ I+G
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFA-----------------------ISG 37
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+ E + M + PD +T + L +C P SL G++IH ++ +
Sbjct: 38 -----QSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEID 92
Query: 345 VPVCNAILQH----------------------------QAG---------ELFRLFSLML 367
V NA+L AG E R F ML
Sbjct: 93 PKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFML 152
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
K ++ AC++ A ++ G +H I +G ++ V N +M MY +CG++
Sbjct: 153 LLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVE 212
Query: 428 SARELFNFMEDP--DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTA 485
AR++F+ M++ DVVSW+ ++ Y G++A++L++RM+ +RP+ VT V +L+A
Sbjct: 213 EARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSA 269
Query: 486 CSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
CS V G L++ + N E +I + +V + A+ G EA ++M
Sbjct: 270 CSSAEDVGLGRVLHKQIVNDELEKNVIVG----NALVSMYAKCGSHTEARAVFDKME-QR 324
Query: 543 DIVVWKSLLAS 553
I+ W +++++
Sbjct: 325 SIISWTTIISA 335
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY C S G A+ F+ +E ++ SW+ L+ +A G +E L+ RMR GVRP+ VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 479 LVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
+ L +C + +G+++++ ++ + I P + + ++++ + G + A+ +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDP--KVSNALLNMYKKCGSLSHAKRVFAK 118
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN--ILKIDPTNSAALVLL 584
M +++ W + + HGNV R +L I T SA + +L
Sbjct: 119 MERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTIL 167
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 308/591 (52%), Gaps = 53/591 (8%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQN------NTNFRIRPSTYAD--LISACSSLRSLQLG 99
F+LFSS+ ++N + A + F+ R +P + LI+ S + ++
Sbjct: 137 FELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDA 196
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
++ D + + D V + +++ + G + +AR +FD+MP RNVV+WT MI G +
Sbjct: 197 VRIFDGM----AEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKM 252
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
L++ M + G+ + T ++ AC G G Q+H V+
Sbjct: 253 NFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLA 312
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLA 276
N++I MY++ I A F + +KDI +W S+I G+ + L+ A +F M ++
Sbjct: 313 NSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVV 372
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
SW T+I G AS +E + LF M +++ I + L+ I Y
Sbjct: 373 SWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLV-------------SIEEYE 419
Query: 337 IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
I F F ML S KP+ T + V+ A A+MA L G Q
Sbjct: 420 IA---------------------FHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQ 458
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H + K + D+ + N L+ MY KCG++ A ++F +++ P+VV+++++I G AQ G
Sbjct: 459 IHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGL 518
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G+EAL++F +M+ + PNH+T +GVL+AC HVGLVEEG + + +M++ Y I P + +
Sbjct: 519 GKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYA 578
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL RAG EA ++ M FD VW ++L + TH +DV + AA+N+ +++P
Sbjct: 579 CMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPN 638
Query: 577 NSAALVLLCNIYASSG--KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ V+L N+++ SG + E+ RLM K RG++K PG SWI ++ ++H
Sbjct: 639 SATPYVILSNLHSISGDERKHELIRLMK--KSRGLKKSPGCSWIILKDEVH 687
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/583 (24%), Positives = 255/583 (43%), Gaps = 77/583 (13%)
Query: 97 QLGR----KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM 152
+LGR K + I + + V +L Y + + AR VF+++P NV S+ AM
Sbjct: 64 KLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAM 123
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
I + + A EL+ M Q + ++ ++I + +LH
Sbjct: 124 ITAYHRRNMVDEAFELFSSMPQR----NSVSYATMITGFVHAGMFDMAEKLH------RE 173
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNE 269
++S N LI Y+K R+ DA +F +A KD+ SW SMI G K+ AR +F++
Sbjct: 174 KPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDK 233
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
M N+ +W +I G + + LF M + + T+ LL AC S +G
Sbjct: 234 MPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEG 293
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ-----TKPDHITFNDVMGA 384
+QIH ++ GF + + N+I+ + R +S+ A++ K D +T+N ++
Sbjct: 294 IQIHGLVLSLGFDVDAYLANSIITMYS----RCYSIDAAAKQFDLMVKKDIVTWNSLITG 349
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
+LE ++ + DV L+ + G + LF M + D ++W
Sbjct: 350 YVQSGNLEKAV----FLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAW 405
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI--- 501
+++I G E A F +M S ++PN TL VL+A + + ++ +GLQ++ I
Sbjct: 406 TAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTK 465
Query: 502 --MQNEYGI-------------------------IPTRERRSCVVDLLARAGRVHEAEDF 534
M+N+ I +P + ++ LA+ G EA +
Sbjct: 466 MSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEI 525
Query: 535 INQMAFD---DDIVVWKSLLASCKTHGNVDVGKRAAENI-----LKIDPTNSAALV-LLC 585
+M D + + + +L++C G V+ G+R + + ++ +P + A +V LLC
Sbjct: 526 FTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLC 585
Query: 586 NIYASSGKWEEVARLMGSM---KERGV-RKVPGQSWIEIQTKI 624
+G ++E L+ SM +GV V G SW ++ +
Sbjct: 586 R----AGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDV 624
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 167/388 (43%), Gaps = 57/388 (14%)
Query: 227 TKFDR---ILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNT 280
TK R I +A ++F+ + K+ SW +++ + S+++ AR VFN++ PN+AS+N
Sbjct: 63 TKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNA 122
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I + +EA LFS M R + + + A G
Sbjct: 123 MITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHA--------------------G 162
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ A +L R KP ++ N ++ + + +E ++
Sbjct: 163 MFD-----------MAEKLHR---------EKPVIVSSNVLINGYSKVGRVEDAVRIF-- 200
Query: 401 IMKTGLA-LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
G+A DV + ++ + G + AR+LF+ M D +VV+W+ +I GY + ++
Sbjct: 201 ---DGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKD 257
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
LF MR GV N TL +L AC EG+Q++ ++ + G + ++
Sbjct: 258 GFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLS-LGFDVDAYLANSII 316
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+ +R + A + M DIV W SL+ GN++ EN+ + D +
Sbjct: 317 TMYSRCYSIDAAAKQFDLMV-KKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWT 375
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKER 607
L+ C +AS G+ +E L M E+
Sbjct: 376 TLI--CG-FASEGRIDEFIGLFQMMPEK 400
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 280/526 (53%), Gaps = 40/526 (7%)
Query: 106 ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAA 165
+++ K Q + ++N+Y G + +R FD++PQ++V +W +MI+ NG + A
Sbjct: 43 VVAGKVQ-SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEA 101
Query: 166 IELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
I + Q+L S + PD +TF +++AC L GR++H K ++ +LI
Sbjct: 102 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIH 158
Query: 225 MYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG 284
MY++F GF+ + AR++F++M ++ SWN +I+G
Sbjct: 159 MYSRF--------------------------GFTGI--ARSLFDDMPFRDMGSWNAMISG 190
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS----LYQGMQIHSYIIKKG 340
+ NA +A+ + EM + + +TV S+L + L ++ I K
Sbjct: 191 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKD 250
Query: 341 FYS-NVPVCNAILQHQAGELFRLFSLMLA-SQTKPDHITFNDVMGACAAMASLEMGTQLH 398
S N + A E ++ +M + P+ T+ ++ A A + +L+ G ++H
Sbjct: 251 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIH 310
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
++KT L LDVFV L+D+Y KCG L A LF + V+W+++I + G E
Sbjct: 311 GRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE 370
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+ LKLF M GV+P+HVT V +L+ACSH G VEEG +R+MQ EYGI P+ + C+
Sbjct: 371 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCM 429
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
VDLL RAG + A DFI M D +W +LL +C+ HGN+++GK A++ + ++D N
Sbjct: 430 VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 489
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
VLL NIYA+ GKWE V ++ +ERG++K PG S IE+ K+
Sbjct: 490 GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV 535
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 176/427 (41%), Gaps = 58/427 (13%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD I D++ S+ ++EA+ F L + R T+ ++ AC +L
Sbjct: 74 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 133
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
GRK+H Q + + +++MY + G AR +FD+MP R++ SW AMI+G
Sbjct: 134 ---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 190
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
QNG A+++ +M G+ + T SI+
Sbjct: 191 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL--------------------------- 223
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR---TVFNEMES 272
+ MY K + A VF I KD+ SW ++I G+++ A V+ ME
Sbjct: 224 ----PVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 279
Query: 273 -----PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
PN +W +I+ A + M + + L D L+ L
Sbjct: 280 CKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLV 339
Query: 328 QGMQIHSYIIKKG--FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
M + + ++ ++ + C+ I H A + +LF ML KPDH+TF ++ AC
Sbjct: 340 DAMSLFYQVPQESSVTWNAIISCHGIHGH-AEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 398
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED----PDV 441
+ +E G + + G+ + ++D+ + G L A ++F++D PD
Sbjct: 399 SHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMA---YDFIKDMPLQPDA 455
Query: 442 VSWSSLI 448
W +L+
Sbjct: 456 SIWGALL 462
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 19/300 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + LLD A +V + + W+ L + + L +EA+ + ++
Sbjct: 228 DMYAKLGLLDSAHKVFEIIPVKDVISWN-TLITGYAQNGLASEAIEVYKMMEECKEIIPN 286
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ ++ A + + +LQ G K+H ++ + D + ++++YGKCG L DA +F
Sbjct: 287 QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFY 346
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
++PQ + V+W A+I+ +G ++L+ +ML G+ PD TF S++ ACS V
Sbjct: 347 QVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE 406
Query: 200 G----RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM- 253
G R + + IK L ++ + + + A++ + + D + WG++
Sbjct: 407 GKWCFRLMQEYGIKPS----LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 462
Query: 254 ----IDGFSKL-DFARTVFNEMESPNLASW---NTIIAGVASCSNANEAMSLFSEMGDRE 305
I G +L FA E++S N+ + + I A V ++ SL E G ++
Sbjct: 463 GACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKK 522
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
LH ++ G +F+ L+++Y G + +R F+ + DV +W+S+I Y G
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97
Query: 457 GEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EA+ F + + S +RP+ T VL AC G + +G +++ + G
Sbjct: 98 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIH-CWAFKLGFQWNVFVA 153
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ ++ + +R G A + M F D+ W ++++ +GN
Sbjct: 154 ASLIHMYSRFGFTGIARSLFDDMPF-RDMGSWNAMISGLIQNGN 196
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/587 (29%), Positives = 297/587 (50%), Gaps = 72/587 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY +I + + + SL+ G+K+H ++ D + N ++++Y K G DA VF+EM
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R++VSW +MI+G G +++ L+ +ML+ G PD+F+ S + ACS + +G+
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 202 QLHAHVIKS--EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
++H H ++S E G ++ +++ MY+K+ +
Sbjct: 252 EIHCHAVRSRIETGDVMV-MTSILDMYSKY----------------------------GE 282
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLC 318
+ +A +FN M N+ +WN +I A +A F +M ++ L PD +T +LL
Sbjct: 283 VSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP 342
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQAGEL------------ 359
A ++ +G IH Y +++GF ++ + A++ Q ++ E+
Sbjct: 343 AS----AILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVIS 398
Query: 360 -----------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
LF + S PD T ++ A A SL G ++H YI+
Sbjct: 399 WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIV 458
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
K+ + ++N L+ MY CG L AR+ FN + DVVSW+S+I+ YA G G ++
Sbjct: 459 KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVW 518
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M +S V PN T +L ACS G+V+EG + + M+ EYGI P E C++DL+
Sbjct: 519 LFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLI 578
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G A+ F+ +M F +W SLL + + H ++ + + AAE I K++ N+ V
Sbjct: 579 GRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYV 638
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGN 629
LL N+YA +G+WE+V R+ M+ +G+ + +S +E + K H N
Sbjct: 639 LLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTN 685
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 285/584 (48%), Gaps = 105/584 (17%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLE---------- 132
++ LIS C S +SL+ G+ +H ++ + + L N ++++Y KCG E
Sbjct: 81 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 140
Query: 133 ---------------------DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
A +FDEMPQRN+VS+ ++I+G +++ A++ + +
Sbjct: 141 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 200
Query: 172 MLQS--GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M GLM D+FT S++ CS L V RQ+H ++LI NALI Y K
Sbjct: 201 MQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKC 260
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
++ +F S+ KD S W +++ S
Sbjct: 261 GEPNSSFCLFRSMVEKDAVS----------------------------WTSMVVTYTRAS 292
Query: 290 NANEAMSLFSEMGDRELIPDGLTVR--SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
++A +F+EM P TV +L+ Y+ +++ +IK+G
Sbjct: 293 RIDDACKVFNEM------PVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVL----- 341
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK---T 404
P TF V+ ACA+ A + G Q+HC I++ +
Sbjct: 342 -------------------------PRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSS 376
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQFGCGEEALKL 463
+V+V N LMDMY KCG + SA LF M DVVSW++LI G+AQ G GE++L +
Sbjct: 377 DNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAV 436
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM S + PNHVT +GVL+AC+H GLV GL+L M+ YG+ P + ++DLL
Sbjct: 437 FDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLG 496
Query: 524 RAGRVHEAEDFINQMA--FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
R R+ EA I ++ + I +W ++L C+ HGN+++ ++AAE + ++P N+
Sbjct: 497 RKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRY 556
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
V+L NIYA+SG+W + R+ MKERG++K P S IE++ H
Sbjct: 557 VMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRH 600
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 190/434 (43%), Gaps = 80/434 (18%)
Query: 11 LPRWCCEYWDA----FELCMLLDQAGEVVDSFLRRFDDIWDFD-LFSSLCKQNLYNEALV 65
LP W+ + + +QA ++ D +R ++ ++ L S L + + EA+
Sbjct: 139 LPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQR--NLVSYNSLISGLTRHEFHKEAVK 196
Query: 66 AFDFLQNNTN-FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
F +QN + T L+S CS L +++ R+VH + + +L+N +++
Sbjct: 197 FFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDA 256
Query: 125 YGKCGS-------------------------------LEDARMVFDEMPQRNVVSWTAMI 153
YGKCG ++DA VF+EMP + VSW A+I
Sbjct: 257 YGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALI 316
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+G +NG+ A+E++ QM++ G++P TF S++ AC+ +G G+Q+H +I+
Sbjct: 317 SGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSS 376
Query: 214 SHLISQ---NALIAMYTKFDRILDAWNVFS-SIARKDITSWGSMIDGFSKLDFARTVFNE 269
+L + NAL+ MY K + A N+F I KD+ SW
Sbjct: 377 DNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSW------------------- 417
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
NT+I G A +++++F M + + P+ +T +L AC + G
Sbjct: 418 ---------NTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAG 468
Query: 330 MQIHSYIIKKGFYSNVPVCN--AILQHQAGELFRLFSLMLASQTKPDHIT-----FNDVM 382
+++ + ++ Y P N A+L G RL M + P+ I+ + V+
Sbjct: 469 LELLDSMERR--YGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVL 526
Query: 383 GACAAMASLEMGTQ 396
G C +LE+ +
Sbjct: 527 GGCRVHGNLELARK 540
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 19/242 (7%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP---DAVLHNHILNMYGKCGSLEDAR 135
R T+ ++ AC+S + G++VH I+ + + + N +++MY KCG ++ A
Sbjct: 343 RAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAE 402
Query: 136 MVFDEMPQ-RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+F+ M ++VVSW +I G +QNG+ ++ ++ +M++S + P+ TF ++ AC+
Sbjct: 403 NLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHA 462
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNA--LIAMYTKFDRILDAWNVFSSIARK---DITS 249
V G +L ++ +G S + LI + + +R+ +A + + + I
Sbjct: 463 GLVNAGLEL-LDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAM 521
Query: 250 WGSMIDG---FSKLDFARTVFN---EMESPNLASW---NTIIAGVASCSNANEAMSLFSE 300
WG+++ G L+ AR +E N + + I A S+ N ++ E
Sbjct: 522 WGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNIYAASGRWSDTNRIRNVMKE 581
Query: 301 MG 302
G
Sbjct: 582 RG 583
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 294/578 (50%), Gaps = 42/578 (7%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++S R L RKV D + ++V +L Y +CG + +AR +F+ +
Sbjct: 67 TWNCMVSGLIRNRMLAEARKVFDAMPVR----NSVSWAALLTGYARCGRVAEARELFNRI 122
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQM----------LQSGLMPDQFT------FG 185
P RNVVSW AM++G ++NG A EL+ M + SG + + F
Sbjct: 123 PDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVREARELFD 182
Query: 186 SIIRACSGLC------CVGLGRQLHAHVIKSE-HGSHLISQNALIAMYTKFDRILDAWNV 238
S+ + +C V LG A V+ + + +S N +I Y + + A +
Sbjct: 183 SMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRL 242
Query: 239 FSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + KD+ S +++ G+ +D A VF +M + +WNT++ G ++A+
Sbjct: 243 FDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDAL 302
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG-MQIHSYIIKKGFYSNVPVCNAILQH 354
LFSEM DR D ++ ++L QG M + + + N ++
Sbjct: 303 KLFSEMPDR----DQISWHAILQGYVQ-----QGDMDSANVWFPRAPNKDAISWNTLISG 353
Query: 355 QAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
E L S M+ KPD T + V+ CA++ SL G +H + +KTG D VM
Sbjct: 354 YKDEGALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVM 413
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ L+ MY KCG + A ++F + D V+W+++I YA G +EALK+F M +G R
Sbjct: 414 SSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFR 473
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
P+H T + +L+AC+H G + EG +R MQ ++ ++P + SC+VDLL R+G +H+A D
Sbjct: 474 PDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYD 533
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGK 593
F ++ D W++L ++C +HG + +G+ A N+LK P++ LL NIYA+
Sbjct: 534 FTRRIPSDHRTTAWETLFSACNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEM 593
Query: 594 WEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA-SGND 630
W A + G MKERG++K G SWIE++ ++ S ND
Sbjct: 594 WSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSND 631
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 177/420 (42%), Gaps = 102/420 (24%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
++ +A E+ D R D W + S K+ EA FD + + P T
Sbjct: 142 MVKRARELFDMMPWRDDVSW-LTMISGYIKRKHVREARELFDSMPS-------PPT---- 189
Query: 87 ISACSSLRS--LQLGRKVHDHILSSKCQP-DAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
S C++L S ++LG +L + Q + V N ++ Y + GS+ A+ +FDEMP+
Sbjct: 190 -SVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPE 248
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++V+S TA++ G QNG +AA +++ MP + T
Sbjct: 249 KDVLSRTAIMRGYLQNGSVDAAWKVFKD------MPHRDT-------------------- 282
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---L 260
++ N ++ + + DR+ DA +FS + +D SW +++ G+ + +
Sbjct: 283 -------------VAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWHAILQGYVQQGDM 329
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
D A F + + SWNT+I+G A+SL SEM L PD T+ ++ C
Sbjct: 330 DSANVWFPRAPNKDAISWNTLISGYKD----EGALSLLSEMIRGGLKPDQATLSVVISIC 385
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNA--------------------ILQHQ----- 355
S +SL G +H + IK GF + V ++ ILQ
Sbjct: 386 ASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWN 445
Query: 356 -----------AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
A E ++F +M + +PDH TF ++ ACA L G CY ++
Sbjct: 446 AMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEG----CYHFRS 501
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+VF N ++ ++ L AR++F+ M + VSW++L+ GYA+ G EA +LF R+
Sbjct: 64 NVFTWNCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIP 123
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
V V+ +++ + G+V+ +L+ +M P R+ S + + R
Sbjct: 124 DRNV----VSWNAMVSGYARNGMVKRARELFDMM-------PWRDDVSWLTMISGYIKRK 172
Query: 529 H--EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGK-RAAENIL-KIDPTNSAALVLL 584
H EA + + M V +LL+ G V++G RAAE + ++ N + ++
Sbjct: 173 HVREARELFDSMP-SPPTSVCNALLS-----GYVELGYMRAAEVLFGQMQTRNPVSWNVM 226
Query: 585 CNIYASSGKWEEVARLMGSMKERGV 609
YA +G RL M E+ V
Sbjct: 227 ITGYARAGSMGIAQRLFDEMPEKDV 251
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 294/580 (50%), Gaps = 27/580 (4%)
Query: 51 FSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
S L + NEA FD LQ ++ ++S S + R++ D +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKA-----IGSWNSIVSGYFSNGLPKEARQLFDEM---- 74
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
+ + V N +++ Y K + +AR VF+ MP+RNVVSWTAM+ G Q G A L+
Sbjct: 75 SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M + + FG +I + R+L+ + + +++ +I +
Sbjct: 135 RMPERNEVSWTVMFGGLIDDGR----IDKARKLYDMMPVKD----VVASTNMIGGLCREG 186
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVAS 287
R+ +A +F + +++ +W +MI G+ +++D AR +F M SW +++ G
Sbjct: 187 RVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTL 246
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSL--LCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
+A F M + +I + + + ++ M+ +G
Sbjct: 247 SGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAY 306
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
L E LF+ M +P + ++ CA +ASL+ G Q+H ++++
Sbjct: 307 ERKGFEL-----EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
DV+V + LM MYVKCG L A+ +F+ D++ W+S+I GYA G GEEALK+F
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M SSG PN VTL+ +LTACS+ G +EEGL+++ M++++ + PT E SC VD+L RA
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLC 585
G+V +A + I M D VW +LL +CKTH +D+ + AA+ + + +P N+ VLL
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541
Query: 586 NIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+I AS KW +VA + +M+ V K PG SWIE+ K+H
Sbjct: 542 SINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVH 581
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 171/396 (43%), Gaps = 62/396 (15%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFD----------------FLQ 71
+D+A ++ D + D + ++ LC++ +EA + FD + Q
Sbjct: 157 IDKARKLYDMMPVK-DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 72 NNTN------FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP--DAVLHNHILN 123
NN F + P +S S L L ++ D + P + N ++
Sbjct: 216 NNRVDVARKLFEVMPEKTE--VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV 273
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
+G+ G + AR VFD M R+ +W MI + G E A++L+ QM + G+ P +
Sbjct: 274 GFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPS 333
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
SI+ C+ L + GRQ+HAH+++ + + + L+ MY K ++ A VF +
Sbjct: 334 LISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS 393
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
KDI W N+II+G AS EA+ +F EM
Sbjct: 394 SKDIIMW----------------------------NSIISGYASHGLGEEALKIFHEMPS 425
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGE 358
+P+ +T+ ++L AC+ L +G++I + K + P C + +AG+
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK--FCVTPTVEHYSCTVDMLGRAGQ 483
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ + L+ + KPD + ++GAC + L++
Sbjct: 484 VDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 262/496 (52%), Gaps = 39/496 (7%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII 188
G++ A VF ++ + ++ W M+ G SQ+ + + LY QM G+ PD+FTF ++
Sbjct: 61 GAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLL 120
Query: 189 RACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT 248
+ C+ L G +H V+K + +N LI ++ ++ A ++F + + +
Sbjct: 121 KGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVV 180
Query: 249 SWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
SW ++ G+++ L AR +F+EM +L SWN +I G A +LF E +++
Sbjct: 181 SWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKD 240
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSL 365
++ N + +L+ + + +F
Sbjct: 241 VVT----------------------------------WNTMIAGYVLRGEQRQALEMFEE 266
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK-TGLALDVFVMNGLMDMYVKCG 424
M PD +T ++ ACA + L++G +LHC I + T L V + N L+DMY KCG
Sbjct: 267 MRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCG 326
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVL 483
S+ A ++F M + DV +W+S+I G A G EE++KLF M++ ++PN +T VGV+
Sbjct: 327 SIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVI 386
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
ACSH G VEEG + +++M+ Y I P C+VDLL RAG + EA + I +M + +
Sbjct: 387 VACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPN 446
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
++W++LL +C+ HGNV++G+ A E +LK+ S VLL NIYAS+G+W+ +
Sbjct: 447 AIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVRKL 506
Query: 604 MKERGVRKVPGQSWIE 619
M + GVRK G+S IE
Sbjct: 507 MDDGGVRKEAGRSLIE 522
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 178/370 (48%), Gaps = 48/370 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+++ L + + L + R++ D + D V N ++ Y K G +E+AR +FDE
Sbjct: 181 SWSALTAGYARRGELGVARQIFDEMPVK----DLVSWNVMITGYVKNGEMENARTLFDEA 236
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+++VV+W MIAG G++ A+E++ +M G PD+ T S++ AC+ L + +GR
Sbjct: 237 PEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGR 296
Query: 202 QLHAHVIKSEHGS-HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+LH + + G ++ NAL+ MY K I A VF + KD+T+
Sbjct: 297 KLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTT----------- 345
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD-RELIPDGLTVRSLLCA 319
WN++I G+A +A E++ LF+EM + + P+ +T ++ A
Sbjct: 346 -----------------WNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVA 388
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPD 374
C+ ++ +G + + ++ Y P C L +AG L F L+ + +P+
Sbjct: 389 CSHAGNVEEGRRYFKLMRER--YDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPN 446
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV---FVMNGLMDMYVKCGSLGSARE 431
I + ++GAC ++E+G + ++K L D +V+ L ++Y G A E
Sbjct: 447 AIIWRTLLGACRVHGNVELGRLANERLLK--LRRDESGDYVL--LSNIYASAGEWDGAEE 502
Query: 432 LFNFMEDPDV 441
+ M+D V
Sbjct: 503 VRKLMDDGGV 512
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 300/597 (50%), Gaps = 84/597 (14%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSL 131
N N + + L+ C S++ L +++H +L++ +P++ L+ K L
Sbjct: 25 NPNRQALSDKFNSLLQQCLSIKQL---KQIHAQLLTNSIHKPNSFLY--------KIADL 73
Query: 132 ED---ARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIELYVQMLQSGLMPDQFTFGSI 187
+D A + F + S+ MI G S + + A+E Y +M GL P+ T+ +
Sbjct: 74 KDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFL 133
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
ACS L V GR H VI+ ++LI MY + ++ DA
Sbjct: 134 FIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDA------------ 181
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
R VF+E+ +L SWN++I+G + +A EA+ LF EM +
Sbjct: 182 ----------------RKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------- 357
P+ +++ S+L AC L G + ++++ N + +A++ H G
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI-HMYGKCGDLVSARR 284
Query: 358 ---------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
E +LF M S T PD IT ++ ACA++ +
Sbjct: 285 IFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGA 344
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L++G Q+ Y + G DV+V L+DMY KCGSL +A +F M + + VSW+++I
Sbjct: 345 LDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISA 404
Query: 451 YAQFGCGEEALKLFRRMRSSG--VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
A G +EAL LF+ M + G V PN +T VGVL+AC H GLV+EG +L+ +M + +G+
Sbjct: 405 LAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGL 464
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
+P E SC+VDL +RAG + EA DF+ M D V+ +LL +C+ N+D+ +R +
Sbjct: 465 VPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMK 524
Query: 569 NILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+L+++P+NS V+ +YA+ +W++ AR+ MK++GV K PG SWI+I +++H
Sbjct: 525 LLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLH 581
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 308/591 (52%), Gaps = 53/591 (8%)
Query: 48 FDLFSSLCKQNLYNEALVAFDFLQN------NTNFRIRPSTYAD--LISACSSLRSLQLG 99
F+LFSS+ ++N + A + F+ R +P + LI+ S + ++
Sbjct: 129 FELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDA 188
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
++ D + + D V + +++ + G + +AR +FD+MP RNVV+WT MI G +
Sbjct: 189 VRIFDGM----AEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKM 244
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
L++ M + G+ + T ++ AC G G Q+H V+
Sbjct: 245 NFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLA 304
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLA 276
N++I MY++ I A F + +KDI +W S+I G+ + L+ A +F M ++
Sbjct: 305 NSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVV 364
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
SW T+I G AS +E + LF M +++ I + L+ I Y
Sbjct: 365 SWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVS-------------IEEYE 411
Query: 337 IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
I F F ML S KP+ T + V+ A A+MA L G Q
Sbjct: 412 IA---------------------FHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQ 450
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H + K + D+ + N L+ MY KCG++ A ++F +++ P+VV+++++I G AQ G
Sbjct: 451 IHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGL 510
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G+EAL++F +M+ + PNH+T +GVL+AC HVGLVEEG + + +M++ Y I P + +
Sbjct: 511 GKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYA 570
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL RAG EA ++ M FD VW ++L + TH +DV + AA+N+ +++P
Sbjct: 571 CMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPN 630
Query: 577 NSAALVLLCNIYASSG--KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ V+L N+++ SG + E+ RLM K RG++K PG SWI ++ ++H
Sbjct: 631 SATPYVILSNLHSISGDERKHELIRLMK--KSRGLKKSPGCSWIILKDEVH 679
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 256/584 (43%), Gaps = 79/584 (13%)
Query: 97 QLGR----KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAM 152
+LGR K + I + + V +L Y + + AR VF+++P NV S+ AM
Sbjct: 56 KLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAM 115
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
I + + A EL+ M Q + ++ ++I + +LH
Sbjct: 116 ITAYHRRNMVDEAFELFSSMPQR----NSVSYATMITGFVHAGMFDMAEKLH------RE 165
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNE 269
++S N LI Y+K R+ DA +F +A KD+ SW SMI G K+ AR +F++
Sbjct: 166 KPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDK 225
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
M N+ +W +I G + + LF M + + T+ LL AC S +G
Sbjct: 226 MPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEG 285
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ-----TKPDHITFNDVMGA 384
+QIH ++ GF + + N+I+ + R +S+ A++ K D +T+N ++
Sbjct: 286 IQIHGLVLSLGFDVDAYLANSIITMYS----RCYSIDAAAKQFDLMVKKDIVTWNSLITG 341
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSW 444
+LE ++ + DV L+ + G + LF M + D ++W
Sbjct: 342 YVQSGNLEKA----VFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAW 397
Query: 445 SSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI--- 501
+++I G E A F +M S ++PN TL VL+A + + ++ +GLQ++ I
Sbjct: 398 TAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTK 457
Query: 502 --MQNEYGI-------------------------IPTRERRSCVVDLLARAGRVHEAEDF 534
M+N+ I +P + ++ LA+ G EA +
Sbjct: 458 MSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEI 517
Query: 535 INQMAFDDDIV----VWKSLLASCKTHGNVDVGKRAAENI-----LKIDPTNSAALV-LL 584
+M DD +V + +L++C G V+ G+R + + ++ +P + A +V LL
Sbjct: 518 FTKMQ-DDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLL 576
Query: 585 CNIYASSGKWEEVARLMGSM---KERGV-RKVPGQSWIEIQTKI 624
C +G ++E L+ SM +GV V G SW ++ +
Sbjct: 577 CR----AGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDV 616
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 167/388 (43%), Gaps = 57/388 (14%)
Query: 227 TKFDR---ILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNT 280
TK R I +A ++F+ + K+ SW +++ + S+++ AR VFN++ PN+AS+N
Sbjct: 55 TKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNA 114
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I + +EA LFS M R + + + A G
Sbjct: 115 MITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHA--------------------G 154
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ A +L R KP ++ N ++ + + +E ++
Sbjct: 155 MFD-----------MAEKLHR---------EKPVIVSSNVLINGYSKVGRVEDAVRIF-- 192
Query: 401 IMKTGLA-LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
G+A DV + ++ + G + AR+LF+ M D +VV+W+ +I GY + ++
Sbjct: 193 ---DGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKD 249
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
LF MR GV N TL +L AC EG+Q++ ++ + G + ++
Sbjct: 250 GFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLS-LGFDVDAYLANSII 308
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
+ +R + A + M DIV W SL+ GN++ EN+ + D +
Sbjct: 309 TMYSRCYSIDAAAKQFDLMV-KKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWT 367
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKER 607
L+ C +AS G+ +E L M E+
Sbjct: 368 TLI--CG-FASEGRIDEFIGLFQMMPEK 392
>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
Length = 630
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 281/603 (46%), Gaps = 81/603 (13%)
Query: 42 FDDIWDFDLFSSLCKQNLYN------EALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD + D+ S C Y EA+ F + N + ST A ACS +
Sbjct: 60 FDQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMDVEPNEMVIVSTLA----ACSGAKD 115
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L LG +H ILS + + +LNMY KCG++E AR VFD++P ++VVSWTAMI
Sbjct: 116 LALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITA 175
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
+Q G A+E M+Q+ + P+ TF + I ACS + GR++HA VI
Sbjct: 176 FAQMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGD 235
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ QNAL++MY K S + A +VF ME N
Sbjct: 236 ITIQNALVSMYAKG----------------------------SSAEEALSVFQRMEDRNR 267
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
SWN++IA A+ + + AM LF M + PD ++ +L AC+S L +IHS
Sbjct: 268 VSWNSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACSSTRCLRSCKRIHSQ 327
Query: 336 I----------------------------IKKGFYSNVPVCNAI----------LQHQAG 357
+ + + +P N +
Sbjct: 328 LELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGS 387
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
+ L+ M+ +PD + +V+ A + + + + +LH + + L + + N L+
Sbjct: 388 KALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALI 447
Query: 418 DMYVKCGSLGSARELFNFMEDP-----DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
+MY +CGSL AR +F+ +E D V+WSSL+ GYA G E A+ L+R M GV
Sbjct: 448 NMYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGV 507
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+P+ VT V +L +CSH GL+ + + M ++ + + C+VD+L RAG V AE
Sbjct: 508 QPDSVTYVSILNSCSHAGLLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAE 567
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
D + M F D+V W +LL CK HG+ G AA N + I P + + VLL N+YA G
Sbjct: 568 DVVRNMPFQPDVVAWNTLLGCCKVHGDARRGAVAARNAVGISPGFAGSTVLLSNMYAEIG 627
Query: 593 KWE 595
+ E
Sbjct: 628 RHE 630
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 188/637 (29%), Positives = 300/637 (47%), Gaps = 70/637 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEAL-VAFDFLQNNTNFRIRPSTYADL 86
LD A +V D R W L + N + A +A D + NF T +
Sbjct: 118 LDLAQKVFDRMRTRNTITWT-SLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTV--I 174
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ ACSS LG ++H ++ S + + ++ MY K G + A VFD M +++
Sbjct: 175 LQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDI 234
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
MI + G AIE++ +L G P +TF +II C+G V G+QL
Sbjct: 235 RCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGL 294
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
K S NA+I MY +A +FSS++ K
Sbjct: 295 AFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEK--------------------- 333
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP-DGLTVRSLLCACTSPLS 325
NL SW +I+G + +A+ F + D I D + ++L C+ +
Sbjct: 334 -------NLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNN 386
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNA----------------ILQHQAGELFRLFSLMLA- 368
L G+QIH +++K G +V V A + H + + F+ +LA
Sbjct: 387 LELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAG 446
Query: 369 --------------------SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+ KPD +TF+ ++ A ASLE G H Y +KTG
Sbjct: 447 FLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDT 506
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
++ V N ++ MY KCGS+ A ++FN M D +SW++LI YA G +++L LF M+
Sbjct: 507 NISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMK 566
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G P+ T++ +L AC++ GL ++G+ L+ +M+ +YGI P E +C+ DLL RAG +
Sbjct: 567 RKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYL 626
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA D I + F ++W++L+ CK HGN++ GK A++++L + P + + +L+ N+Y
Sbjct: 627 SEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMY 686
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
AS +E A++ M + RK G SWIEI K+H
Sbjct: 687 ASEKMSDEAAKVRKVMNDLKFRKEAGSSWIEIDNKVH 723
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 146/571 (25%), Positives = 250/571 (43%), Gaps = 72/571 (12%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+ +LI R LG+ VH +++ + Q D N++LN+Y K L+ A+ VFD M
Sbjct: 70 WPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMR 129
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
RN ++WT++I G ++ +A + M + G ++ T I++ACS LG Q
Sbjct: 130 TRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQ 189
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
+H VIKS ++ +LIAMYTK GF D
Sbjct: 190 IHCFVIKSGFDENVFVGTSLIAMYTK--------------------------SGF--FDV 221
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A VF+ M ++ N +I N +A+ +F + + P T +++ C
Sbjct: 222 AEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNG 281
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLM----LASQT-- 371
L + +G Q+ K GF S V NAI+ E R+FS M L S T
Sbjct: 282 DLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTAL 341
Query: 372 --------------------------KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
D ++ C+ +LE+G Q+H ++MK G
Sbjct: 342 ISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLG 401
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ-FGCGEEALKLF 464
A DV V L+D+Y KC L SAR +F+ + + + S+++++ G+ + G E+ + LF
Sbjct: 402 CACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILF 461
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
++R +GV+P+ VT +L+ ++ +E+G + + + G + V+ + A+
Sbjct: 462 NQLRLAGVKPDMVTFSRLLSLLANQASLEKG-RSFHAYTVKTGFDTNISVANSVISMYAK 520
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALV 582
G + +A N M D I W +L+++ HG E + + DP L
Sbjct: 521 CGSIEDAHQMFNIMNCRDSI-SWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILA 579
Query: 583 LLCNIYASSGKWEEVARLMGSMKER-GVRKV 612
+L SG W++ L M+ + G++ +
Sbjct: 580 IL-QACTYSGLWKDGICLFNLMEPKYGIKPL 609
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 43/279 (15%)
Query: 371 TKPDHITFND---VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ D + FND ++ +G +H Y++K G D F N ++++YVK L
Sbjct: 60 SNEDTLLFNDWPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLD 119
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A+++F+ M + ++W+SLI GY + + A + M G N T +L ACS
Sbjct: 120 LAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACS 179
Query: 488 HVG--LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD--- 542
++ E + + I + G + ++ + ++G AE + M F D
Sbjct: 180 SPDDRILGEQIHCFVI---KSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRC 236
Query: 543 ----------------DIVVWKSLL---------------ASCKTHGNVDVGKRAAENIL 571
I V+K+LL ++C V+ GK+
Sbjct: 237 LNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAF 296
Query: 572 KIDPTNSAAL-VLLCNIYASSGKWEEVARLMGSMKERGV 609
K + ++ + +Y +SG +E R+ SM E+ +
Sbjct: 297 KYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNL 335
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 265/490 (54%), Gaps = 38/490 (7%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A +F ++PQ + + MI G SQ+ AI LY +M + + D +TF +++AC+
Sbjct: 61 AHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTR 120
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L V G +H V++ GS+ + +N L+ + K + A ++F + D+ +W S+
Sbjct: 121 LFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSL 180
Query: 254 IDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
I G+++ L AR +FNEM +L SWN +I G A LF E ++++
Sbjct: 181 IAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVS-- 238
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
+ M I Y+ VC L QA ELF + M +
Sbjct: 239 ----------------WNAM-IAGYV----------VCG--LSKQALELF---NEMCRAG 266
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCGSLGSA 429
PD +T ++ ACA + LE G ++H +M+ + L + N L+DMY KCG++ +
Sbjct: 267 VFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKES 326
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
++F + D DV+SW+S+IVG A G G+E+L LF+ M+ + + PN +T VGVL ACSH
Sbjct: 327 LDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHA 386
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
G ++EG + + +M +EY I P C+VD+L RAG + EA FI+ M + + ++W++
Sbjct: 387 GEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRT 446
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LLA+CK HG+V++ K A E + + +S VL+ N+YAS G+W+ ++ M + GV
Sbjct: 447 LLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGV 506
Query: 610 RKVPGQSWIE 619
K+ G S++E
Sbjct: 507 TKIRGSSFVE 516
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 159/302 (52%), Gaps = 10/302 (3%)
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
++A +F ++ P+ +N +I G + N A+SL++EM + D T +L AC
Sbjct: 59 NYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKAC 118
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKPDHITF 378
T + G +H +++ GF SN V N +L A G+L + + + K D + +
Sbjct: 119 TRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDL-NVATSLFDDSCKGDVVAW 177
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ ++ A L++ +L + + D+ N ++ YVK G + SAR LF+
Sbjct: 178 SSLIAGYARRGDLKVARKLFNEMPER----DLVSWNVMITGYVKQGEMESARMLFDEAPV 233
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
DVVSW+++I GY G ++AL+LF M +GV P+ VTL+ +L+AC+ +G +E G ++
Sbjct: 234 KDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKV 293
Query: 499 Y-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ ++M+ G + T + ++D+ A+ G + E+ D + D D++ W S++ H
Sbjct: 294 HAKVMEISMGKLSTL-LGNALIDMYAKCGNIKESLDVFWSIT-DKDVISWNSVIVGMALH 351
Query: 558 GN 559
G+
Sbjct: 352 GH 353
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 173/366 (47%), Gaps = 41/366 (11%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ LI+ + L++ RK+ + + + D V N ++ Y K G +E ARM+FDE P
Sbjct: 177 WSSLIAGYARRGDLKVARKLFNEM----PERDLVSWNVMITGYVKQGEMESARMLFDEAP 232
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
++VVSW AMIAG G A+EL+ +M ++G+ PD+ T S++ AC+ L + G++
Sbjct: 233 VKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKK 292
Query: 203 LHAHVIKSEHGS-HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+HA V++ G + NALI MY K I ++ +VF SI KD+ S
Sbjct: 293 VHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVIS------------ 340
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
WN++I G+A + E++SLF M ++ P+ +T +L AC+
Sbjct: 341 ----------------WNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACS 384
Query: 322 SPLSLYQGMQIHSYIIKK-GFYSNVPVCNAILQH--QAGELFRLFSLMLASQTKPDHITF 378
+ +G + + + N+ C ++ +AG L + + + +P+ I +
Sbjct: 385 HAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIW 444
Query: 379 NDVMGACAAMASLEMG--TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
++ AC +E+ + M+ + D +M+ L Y G A ++ M
Sbjct: 445 RTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNL---YASRGEWDGAEKVRKLM 501
Query: 437 EDPDVV 442
+D V
Sbjct: 502 DDSGVT 507
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 163/407 (40%), Gaps = 108/407 (26%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ AC+ L + G VH +L +AV+ N +L + KCG L A +FD+
Sbjct: 110 TFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDS 169
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+ +VV+W+++IAG ++ G A +L+ + MP++
Sbjct: 170 CKGDVVAWSSLIAGYARRGDLKVARKLFNE------MPER-------------------- 203
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
L+S N +I Y K + A +F KD+ SW
Sbjct: 204 -------------DLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSW----------- 239
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N +IAG C + +A+ LF+EM + PD +T+ SLL AC
Sbjct: 240 -----------------NAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACA 282
Query: 322 SPLSLYQGMQIHSYI-------------------------IKKG---FYS---------N 344
L G ++H+ + IK+ F+S N
Sbjct: 283 DLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWN 342
Query: 345 VPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ L E LF +M ++ P+ ITF V+ AC+ ++ G + + +M +
Sbjct: 343 SVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYK-YFDLMSS 401
Query: 405 GLALDVFVMN--GLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
++ + + ++DM + G L A + + M+ +P+ + W +L+
Sbjct: 402 EYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLL 448
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/606 (29%), Positives = 306/606 (50%), Gaps = 56/606 (9%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHIL--NMY 125
+F N N R I CSS + L ++VH +L + D + + +
Sbjct: 13 NFSTLNNNLLFRNHQILSTIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASAL 69
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTF 184
+L+ AR +FD++PQ N+ +W +I + + + +++ +L + +P++FTF
Sbjct: 70 SSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTF 129
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+I+A S L +G +H IK G L N+L+ Y + A +F I+
Sbjct: 130 PFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISC 189
Query: 245 KDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS-------------- 287
KD+ SW SMI F++ + A +F +ME N+ + + GV S
Sbjct: 190 KDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWV 249
Query: 288 -------------------------CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
C + ++A LF EM +R++ +++ +
Sbjct: 250 CSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFS-----WTIMLDGYA 304
Query: 323 PLSLYQGMQI--HSYIIKKGFYSNVPVCNAILQHQAGELFRLFS-LMLASQTKPDHITFN 379
+ Y ++ ++ +K+ NV + + E +F+ L L+ KPD +T
Sbjct: 305 KMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLV 364
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+ ACA + ++++G +H YI + G+ L+ +++ L+DMY KCGSL A E+F +E+
Sbjct: 365 STLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEER 424
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
DV WS++I G G G+ A+ LF M+ + V+PN VT VL ACSH GLV+EG +
Sbjct: 425 DVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFF 484
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M+ YG++P + +C+VD+L RAG + EA + IN+M+ VW +LL +C H N
Sbjct: 485 HEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMN 544
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
V++G+ A++ +LK++P N A+VLL NIYA +G+WE+V+ L M++ ++K PG S IE
Sbjct: 545 VELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIE 604
Query: 620 IQTKIH 625
+H
Sbjct: 605 ANGNVH 610
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRF-------DDIWDFDLFSSLCKQN-LYNEALVAFDFLQ 71
D F ++LD ++ D R +I +++ S +QN EAL F+ LQ
Sbjct: 292 DVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQ 351
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
+ + T +SAC+ L ++ LG +H +I + L + +++MY KCGSL
Sbjct: 352 LSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSL 411
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
E A VF + +R+V W+AMIAG +G+ AAI+L+ +M ++ + P+ TF +++ AC
Sbjct: 412 EKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCAC 471
Query: 192 SGLCCVGLGR 201
S V GR
Sbjct: 472 SHAGLVDEGR 481
>gi|218201765|gb|EEC84192.1| hypothetical protein OsI_30581 [Oryza sativa Indica Group]
Length = 715
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/583 (29%), Positives = 298/583 (51%), Gaps = 75/583 (12%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+TYA + AC+ R L++G +VH ++ S V+ +L+ Y C L+ AR +FD
Sbjct: 113 ATYASALGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDT 172
Query: 141 M--------------------------------PQRNVVSWTAMIAGCSQNGQEN--AAI 166
+ P R++ +WTA+I+G ++ E ++
Sbjct: 173 LHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSL 232
Query: 167 ELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
EL+VQ+L + G+MP++FT+ S++RAC + + GR +H +I+S S + +AL+ +
Sbjct: 233 ELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDL 292
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTII 282
Y + + DA V++ + + + ++I GF + + A+ VF++M + S+N +I
Sbjct: 293 YCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMI 352
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
A + +F M R ++ T+ S++ L +G ++ I KG
Sbjct: 353 KAYADEGRLEDCRRMFEMMPRRNMV----TLNSMMSVLLQNGKLEEGRKLFEQIRMKGTR 408
Query: 343 SNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
++ TF ++ ACA + ++E G +H +
Sbjct: 409 AS--------------------------------TFPALLHACATIGTIEQGKMVHALLC 436
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
KT + +V L+DMY KCG + AR F+ + P+V SW+SLI G AQ G EA+
Sbjct: 437 KTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIV 496
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
F RM + V+PN +T +G+L A + GLV +G++ + M++ YG++PT E +C VDLL
Sbjct: 497 QFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMES-YGVVPTVEHYTCAVDLL 555
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RA RV EAE FI++M D VVW +LL +C ++++G++ AE + + + +A V
Sbjct: 556 GRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYV 615
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ NIYA GKWE+V ++ ++ +K PG SWIE++ +H
Sbjct: 616 AMSNIYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKDMVH 658
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 201/439 (45%), Gaps = 26/439 (5%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
AR VFD M +R +SW A +A ++ G+ A+ +M +S D+ T+ S + AC+
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACAR 124
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
C+ +G Q+H V+KS + +L+ Y+ + A +F ++ + W M
Sbjct: 125 GRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPM 184
Query: 254 IDGFSKLDFARTVFNEME----SPNLASWNTIIAGVASCSNAN--EAMSLFSE-MGDREL 306
+ + + + ++ S +L +W II+G A +N +++ LF + + + +
Sbjct: 185 VVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGV 244
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELFRLFS 364
+P+ T S+L AC +L G IH +I+ GF S + +A+ L ++G +
Sbjct: 245 MPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVM 304
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCG 424
+ Q P IT N ++ +M E + + + D N ++ Y G
Sbjct: 305 VYNGLQM-PSLITSNTLIAGFISMGRTEDAKLVFSQMTEH----DSGSYNLMIKAYADEG 359
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
L R +F M ++V+ +S++ Q G EE KLF ++R G R + T +L
Sbjct: 360 RLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIRMKGTRAS--TFPALLH 417
Query: 485 ACSHVGLVEEGLQLYRIM----QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
AC+ +G +E+G ++ ++ G + T +VD+ ++ G V +A + +
Sbjct: 418 ACATIGTIEQGKMVHALLCKTPFESNGYVGT-----ALVDMYSKCGCVSDARAAFSCI-M 471
Query: 541 DDDIVVWKSLLASCKTHGN 559
++ W SL+ +G+
Sbjct: 472 SPNVASWTSLINGLAQNGH 490
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 70/122 (57%)
Query: 79 RPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVF 138
R ST+ L+ AC+++ +++ G+ VH + + + + + +++MY KCG + DAR F
Sbjct: 408 RASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAF 467
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+ NV SWT++I G +QNG AI + +ML++ + P++ TF I+ A + V
Sbjct: 468 SCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVN 527
Query: 199 LG 200
G
Sbjct: 528 KG 529
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 187/607 (30%), Positives = 304/607 (50%), Gaps = 63/607 (10%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
AF LD A +V D + W+ L +L + ++++ F + +++ F
Sbjct: 182 AFSSFSALDYARKVFDQIPQPNLYSWNI-LIRALATSSDPIQSVLVFIRMLHDSPFGPNK 240
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD- 139
T+ LI A + R +G+ VH + + D + N +++ Y CG L+ A +VF+
Sbjct: 241 FTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEM 300
Query: 140 -EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
E +++VSW +M+ G Q G + A++L+ +M G+ P+ T S++ AC+ +
Sbjct: 301 IEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLT 360
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
LGR++ ++ ++E +L NA I M+ K
Sbjct: 361 LGRKVCDYIDRNEMMMNLNVCNATIDMFVKC----------------------------G 392
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
+++ AR +F+ ME ++ SW TII G A S A +F M R+ IP
Sbjct: 393 EVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSM-PRKDIP---------- 441
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITF 378
A +S Y+ S P +A +FR L S +PD +T
Sbjct: 442 AWNVLISGYE-------------QSGRP-------KEALAIFRELQLT-KSGARPDQVTL 480
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
+ ACA + ++++G +H YI K + L+ + L+DMY K G + A E+F+ + +
Sbjct: 481 LSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGN 540
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
DV WS++I G A G GE A++LF M+ + V+PN VT +L ACSH GLV+EG +L
Sbjct: 541 KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRL 600
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ M+ YG++P + SC+VD+L RAG + EA FI M VW +LL +C HG
Sbjct: 601 FDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHG 660
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N+++ ++A +L+I+P N A VLL N+YA +G WE V+ L M++ G++K G S I
Sbjct: 661 NLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSI 720
Query: 619 EIQTKIH 625
EI +H
Sbjct: 721 EIDGTVH 727
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 279/543 (51%), Gaps = 15/543 (2%)
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
CSSL + +++H +L + ++ + ++ + C + A VF+++ +V+ +
Sbjct: 27 CSSLNQV---KQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLY 83
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
+I +N + A ++ +M SG+ D FT+ +++ACSG V + +HA V K
Sbjct: 84 NTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEK 143
Query: 210 SEHGSHLISQNALIAMYTK--FDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFAR 264
+ N+LI Y K D + A VF +A +D SW SMI G K L AR
Sbjct: 144 MGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEAR 203
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+F+EM + SWNTI+ G N A LF +M R ++ V A +
Sbjct: 204 RLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDM 263
Query: 325 S--LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVM 382
+ L+ M + + + + + + A + L++ M + K D T ++
Sbjct: 264 ARILFDKMPVKNLVP-----WTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISIL 318
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
ACA L +G ++H I +T V N L+DMY KCGSL +A +F+ M DVV
Sbjct: 319 SACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVV 378
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
SW+++I G A G GE+AL+LF RM+ G P+ VT VGVL AC+H G V+EGL + M
Sbjct: 379 SWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAM 438
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ +YG+ P E C+VDLL R GR+ EA ++ M + + ++W +LL +C+ H +
Sbjct: 439 ERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGL 498
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
+ + ++K + ++S L +L NIYA++G W+ A + MK ++K G S IE+
Sbjct: 499 AEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDD 558
Query: 623 KIH 625
++H
Sbjct: 559 EVH 561
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 216/494 (43%), Gaps = 70/494 (14%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFD--LFSSLCKQNLYN-EALVAFD--FLQNNTN 75
AF LC + A V F+ I D D L+++L + ++ N E L+AF F ++
Sbjct: 58 AFSLCRQMTLAVNV-------FNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSG 110
Query: 76 FRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG--SLED 133
TY L+ ACS +++ +H + D + N +++ Y KCG +
Sbjct: 111 VCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAA 170
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
AR VF+ M +R+ VSW +MI G + G+ A L+ + MP++ T
Sbjct: 171 ARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDE------MPERDT---------- 214
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+S N ++ Y K + A+ +F + +++ SW +M
Sbjct: 215 -----------------------VSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTM 251
Query: 254 IDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+ G+SK +D AR +F++M NL W +I+G A A +A++L+++M + L D
Sbjct: 252 VLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDD 311
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLA 368
TV S+L AC L G ++H+ I + F + PV NA++ A G L S+
Sbjct: 312 GTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSI-FH 370
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ D +++N ++ A E QL + G D G++ G +
Sbjct: 371 GMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDE 430
Query: 429 ARELFNFME-----DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
F+ ME P+V + ++ + G +EA FR + S + PN + +L
Sbjct: 431 GLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEA---FRLVHSMPLEPNAIIWGTLL 487
Query: 484 TAC---SHVGLVEE 494
AC S GL EE
Sbjct: 488 GACRMHSATGLAEE 501
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 128/253 (50%), Gaps = 14/253 (5%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ S ++ L +A+ ++ ++ + T ++SAC+ L LG++VH I +
Sbjct: 282 MISGYAEKGLAKDAINLYNQMEE-AGLKFDDGTVISILSACAVSGLLGLGKRVHASIERT 340
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ + + N +++MY KCGSLE+A +F M +++VVSW A+I G + +G A++L+
Sbjct: 341 RFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLF 400
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG--SHLISQNALIAMYT 227
+M G +PD+ TF ++ AC+ V G + H ++ ++G + ++ +
Sbjct: 401 SRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLH-YFHAMERDYGVPPEVEHYGCMVDLLG 459
Query: 228 KFDRILDAWNVFSSIA-RKDITSWGSMI--------DGFSKLDFARTVFNEM-ESPNLAS 277
+ R+ +A+ + S+ + WG+++ G ++ F R V +E+ +S NL+
Sbjct: 460 RGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSM 519
Query: 278 WNTIIAGVASCSN 290
+ I A N
Sbjct: 520 LSNIYAAAGDWDN 532
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/541 (31%), Positives = 291/541 (53%), Gaps = 9/541 (1%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L +G K+H+ + V+ N +L MY K ++ A VF M +++VVSW++MIAG
Sbjct: 415 LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 474
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
N + A+ + ML + P+ TF + + AC+ + G+++HA+V++ GS
Sbjct: 475 FCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSE 533
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMES 272
NAL+ +Y K + AW FS + KD+ SW M+ GF D A ++FN+M
Sbjct: 534 GYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMY 593
Query: 273 PNLASWNTIIAGVASCSNA--NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+L A A + + L ++ I + +LL + + +
Sbjct: 594 TSLGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAI 653
Query: 331 QIHSYIIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
++ ++ +K S + + H++ + F ML KP+ +TF + ACAA
Sbjct: 654 EVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSACAATG 712
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+L G ++H Y+++ G+ + +V N L+D+YVKCG A F+ + DVVSW+ ++
Sbjct: 713 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 772
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
G+ G G+ AL LF +M G P+ VT V ++ ACS G+V +G +L+ ++ I+
Sbjct: 773 GFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIV 831
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
P + +C+VDLL+R G++ EA + IN+M D VW +LL C+ H +V++G+ AA+
Sbjct: 832 PNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKV 891
Query: 570 ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGN 629
IL+++P + A VLLC++Y +GKW +VAR+ +M+E+G+ + G SW+E++ HA
Sbjct: 892 ILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLT 951
Query: 630 D 630
D
Sbjct: 952 D 952
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 279/581 (48%), Gaps = 83/581 (14%)
Query: 32 GEVVDSFLRRFDDIWD-FDLFSSLCKQNLYNEALVA-----FDFLQNNTNFR-------I 78
G + S L RF +IW + +F+ + ++++++ ++ FL+ + +
Sbjct: 134 GNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 79 RPSTYAD--LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP Y ++ C + ++GR+VH H+L + + N ++ MY KCG + AR
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD M + +SW AMIAG +N + A +EL++ ML++ + P+ T S+ A L
Sbjct: 254 VFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
VG +++H +K + N+LI MYT R+ DA +FS + KD SW +MI G
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
+ K F ++A+ +++ M + PD +T+ S
Sbjct: 374 YEKNGF----------------------------PDKALEVYALMELHNVNPDDVTIASA 405
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL------ 362
L AC L G+++H KGF V V NA+L+ +A E+F+
Sbjct: 406 LAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDV 465
Query: 363 --FSLMLA-------------------SQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+S M+A KP+ +TF + ACAA +L G ++H Y+
Sbjct: 466 VSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYV 525
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ G+ + +V N L+D+YVKCG A F+ + DVVSW+ ++ G+ G G+ AL
Sbjct: 526 LRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIAL 585
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF +M + + + L AC+ +G ++ G++L+ + QN+ G I + ++++
Sbjct: 586 SLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNK-GFIRYVVVANALLEM 642
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLAS-CKTHGNVD 561
A++ + +A + MA + D+V W S++A C H + D
Sbjct: 643 YAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFD 682
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 231/521 (44%), Gaps = 75/521 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
Y L C R++ G + + L N +L+M + G + A VF +M
Sbjct: 98 AYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKM 157
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+V SW M+ G + G A++LY +ML +G+ PD +TF ++R C G+ +GR
Sbjct: 158 PERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGR 217
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
++HAHV++ G + NAL+ MY K I+ A VF +A D SW
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISW----------- 266
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
N +IAG + LF M + E+ P+ +T+ S+ A
Sbjct: 267 -----------------NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------- 360
+ ++H + +K+GF +V CN+++Q AG++F
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369
Query: 361 ---------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+++LM PD +T + ACA + L++G +LH G
Sbjct: 370 MISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
V V N L++MY K + A E+F FM + DVVSWSS+I G+ +AL FR
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFR 489
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY----RIMQNEYGIIPTRERRSCVVDL 521
M V+PN VT + L+AC+ G + G +++ R G +P + ++DL
Sbjct: 490 YMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDL 543
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ G+ A + + + D+V W +L+ HG D+
Sbjct: 544 YVKCGQTSYAWAQFSVHS-EKDVVSWNIMLSGFVAHGLGDI 583
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 190/421 (45%), Gaps = 69/421 (16%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH-LISQNALIAMYTKFDRILDAWN 237
PD+ + ++ R C V G + A +EH S L NA+++M +F I AW
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARA-DAEHPSFGLRLGNAMLSMLVRFGEIWHAWR 152
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
VF+ + +D+ SW M+ G+ K+ F EA+ L
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGF----------------------------LEEALDL 184
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL----- 352
+ M + PD T +L C G ++H+++++ GF V V NA++
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAK 244
Query: 353 -------------------------------QHQAGELFRLFSLMLASQTKPDHITFNDV 381
H+ LF ML ++ +P+ +T V
Sbjct: 245 CGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV 304
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
A ++ + ++H + +K G A+DV N L+ MY G +G A ++F+ ME D
Sbjct: 305 TVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDA 364
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+SW+++I GY + G ++AL+++ M V P+ VT+ L AC+ +G ++ G++L+ +
Sbjct: 365 MSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHEL 424
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS-CKTHGNV 560
QN+ G I + ++++ A++ + +A + MA + D+V W S++A C H +
Sbjct: 425 AQNK-GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSF 482
Query: 561 D 561
D
Sbjct: 483 D 483
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 280/559 (50%), Gaps = 68/559 (12%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
DA +++ Y + G + DA FDEM R+V +W AM++G +N + A+ L+ +M+
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
G+ D T S++ C L L +H + +K L NA+I +Y K
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKL---- 218
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
L+ R VF+ M S +L +WN+II+G
Sbjct: 219 ------------------------GMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVAS 254
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------------ 341
A+ +F M D + PD LT+ SL A + G +H Y++++G+
Sbjct: 255 AVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIV 314
Query: 342 ---------------YSNVPVCNAI---------LQHQ-AGELFRLFSLMLASQT-KPDH 375
+ ++PV +A+ +Q+ A E ++ M + KP
Sbjct: 315 DMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQ 374
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
TF V+ A + + +L+ GT++H +KTGL LDV+V ++D+Y KCG L A LF
Sbjct: 375 GTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQ 434
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
W+++I G G G +AL LF +M+ G+ P+HVT V +L ACSH GLV++G
Sbjct: 435 TPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQG 494
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ +MQ YGI P + +C+VD+ RAG++ +A DFI M D +W +LL +C+
Sbjct: 495 RNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACR 554
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
HGNV++GK A++N+ ++DP N VL+ N+YA GKW+ V + ++ + ++K PG
Sbjct: 555 IHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGW 614
Query: 616 SWIEIQTKIHA--SGNDIS 632
S IE++ ++ SGN ++
Sbjct: 615 SSIEVKRSVNVFYSGNQMN 633
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 179/421 (42%), Gaps = 76/421 (18%)
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIK-SEHGSHLISQNALIAMYTKFDRILDAWNV 238
D FTF ++RA G G QLHA ++ + AL+ Y +F R+ DA+
Sbjct: 70 DAFTFPPLLRAAQG---PGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 239 FSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN--EAMS 296
F + +D+ +W +M+ G C NA EA+
Sbjct: 127 FDEMRHRDVPAWNAMLSGL------------------------------CRNARAAEAVG 156
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
LF M + D +TV S+L C + +H Y +K G + VCNA++
Sbjct: 157 LFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYG 216
Query: 353 -----------------------------QHQAGEL---FRLFSLMLASQTKPDHITFND 380
Q G++ +F M S PD +T
Sbjct: 217 KLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLS 276
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLAL-DVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
+ A A + G +HCY+++ G + D+ N ++DMY K + +A+ +F+ M
Sbjct: 277 LASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR 336
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
D VSW++LI GY Q G EA+ ++ M + G++P T V VL A SH+G +++G ++
Sbjct: 337 DAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRM 396
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ + + G+ +CV+DL A+ G++ EA Q W ++++ HG
Sbjct: 397 H-ALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP-RRSTGPWNAVISGVGVHG 454
Query: 559 N 559
+
Sbjct: 455 H 455
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 204/482 (42%), Gaps = 55/482 (11%)
Query: 32 GEVVDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYAD 85
G V D++ R FD++ D + S LC+ EA+ F + T +
Sbjct: 118 GRVRDAY-RAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVME-GVAGDAVTVSS 175
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++ C L L +H + + + + N ++++YGK G LE+ R VFD M R+
Sbjct: 176 VLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRD 235
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT---FGSIIRACSGLCCVGLGRQ 202
+V+W ++I+G Q GQ +A+E++ M SG+ PD T S I C +C GR
Sbjct: 236 LVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG---GRS 292
Query: 203 LHAHVIKSEHG-SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+H ++++ +I+ NA++ MY K +I A +F S+ +D SW
Sbjct: 293 VHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSW----------- 341
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLCAC 320
NT+I G A+EA+ ++ M E L P T S+L A
Sbjct: 342 -----------------NTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAY 384
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHIT--F 378
+ +L QG ++H+ IK G +V V ++ A + +L ML + P T +
Sbjct: 385 SHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYA-KCGKLDEAMLLFEQTPRRSTGPW 443
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME- 437
N V+ L + + G++ D L+ G + R FN M+
Sbjct: 444 NAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQT 503
Query: 438 ----DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
P ++ ++ + + G ++A R M ++P+ +L AC G VE
Sbjct: 504 AYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMP---IKPDSAIWGALLGACRIHGNVE 560
Query: 494 EG 495
G
Sbjct: 561 MG 562
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 125/238 (52%), Gaps = 5/238 (2%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + ++ A + DS R W+ L + + L +EA+ +D +Q + +
Sbjct: 315 DMYAKLSKIEAAQRMFDSMPVRDAVSWN-TLITGYMQNGLASEAIHVYDHMQKHEGLKPI 373
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ ++ A S L +LQ G ++H + + D + ++++Y KCG L++A ++F+
Sbjct: 374 QGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFE 433
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ P+R+ W A+I+G +G A+ L+ QM Q G+ PD TF S++ ACS V
Sbjct: 434 QTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQ 493
Query: 200 GRQLHAHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
GR +++++ +G I+++ ++ M+ + ++ DA++ ++ + D WG+++
Sbjct: 494 GRNFF-NMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALL 550
>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 179/606 (29%), Positives = 303/606 (50%), Gaps = 51/606 (8%)
Query: 69 FLQNNTNFRIRPS--TYADLISACSS-LRSLQLGRKVHDHILSSKCQPDAVLHNHILNMY 125
FL+ T + P+ TY +++ACSS L G ++H L + + N ++++Y
Sbjct: 151 FLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLY 210
Query: 126 GKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTF 184
K S A +F+++P+R++ SW +I+ Q+ + A L+ M + D FT
Sbjct: 211 AKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTL 270
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
++ A + L G+Q+HAH +K + L N LI Y+KF + D +F +
Sbjct: 271 SILLTASASLM---EGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRV 327
Query: 245 KDITSWGSMIDG---FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
+D+ +W M+ F ++ A VF+EM N S+NT++AG EAM LF M
Sbjct: 328 RDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRM 387
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH------- 354
+ L ++ S++ AC Q+H + +K GF SN V A+L
Sbjct: 388 VEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRM 447
Query: 355 -QAGELFRLFSLM-------------LASQTKP------------------DHITFNDVM 382
AG++F + L A +P D + ++
Sbjct: 448 VDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASML 507
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
G C + L+MG Q+HC+++K GL ++ V N ++ MY KCGS+ A ++F M D+V
Sbjct: 508 GLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIV 567
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC--SHVGLVEEGLQLYR 500
+W++LI G G+ AL+++ M G++PN VT V +++A +++ LV++ L+
Sbjct: 568 TWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFN 627
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
M+ Y I PT + + +L G + EA + IN M F +VW+ LL C+ H N
Sbjct: 628 SMRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNE 687
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+GK AA+NIL ++P + + +L+ N+Y++SG+W+ + M+E+G RK P QSWI
Sbjct: 688 LIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQSWIVC 747
Query: 621 QTKIHA 626
+ KI++
Sbjct: 748 EKKINS 753
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 149/575 (25%), Positives = 268/575 (46%), Gaps = 66/575 (11%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRS--LQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
L++ T++ + P +++ L + S RS L + VH +L + + D L N +++ Y K
Sbjct: 53 LRHGTHY-LPPESHSLLHALHVSSRSGDTHLAKTVHATLLK-RDEEDTHLSNALISTYLK 110
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGS 186
A +F +P NVVS+T +I+ S++ Q + A+ L+++M +S L P+++T+ +
Sbjct: 111 LNLFPHALRLFLSLPSPNVVSYTTLISFLSKHRQHH-ALHLFLRMTTRSHLPPNEYTYVA 169
Query: 187 IIRACSGLC-CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
++ ACS L G QLHA +K+ H NAL+++Y K A +F+ I R+
Sbjct: 170 VLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRR 229
Query: 246 DITSWGSMIDGF---SKLDFARTVFNEMESPN------------LASWNTIIAGVASCSN 290
DI SW ++I S D A +F M++ + L + +++ G ++
Sbjct: 230 DIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLMEGQQVHAH 289
Query: 291 A------------NEAMSLFSEMG---DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
A N + +S+ G D E + +G+ VR ++ T ++ Y + +
Sbjct: 290 AVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVI-TWTEMVTAYMEFGLVNL 348
Query: 336 IIKKGFYSNVPVCNAI----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
+K + +P N++ Q E RLF M+ + + V+ AC
Sbjct: 349 ALK--VFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDAC 406
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF--MEDPDVVS 443
+ ++ Q+H + +K G + +V L+DMY +CG + A ++F +E+ V
Sbjct: 407 GLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVV 466
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLY-RI 501
W+++I GYA+ G EEA+ LF RS G V + V +L C +G ++ G Q++ +
Sbjct: 467 WTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHV 526
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
++ G E + VV + + G V +A M DIV W +L++ H
Sbjct: 527 IKCGLGF--NLEVGNAVVSMYFKCGSVDDAMKVFGDMPC-TDIVTWNTLISGNLMHRQ-- 581
Query: 562 VGKRAAENILK-----IDPTNSAALVLLCNIYASS 591
G RA E ++ I P N VL+ + Y +
Sbjct: 582 -GDRALEIWVEMLGEGIKP-NQVTFVLIISAYRQT 614
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 17/180 (9%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSL---------CKQNLYNEALVAFDFL 70
D + C + AG++ FLR W+ + FSS+ + EA+ F
Sbjct: 439 DMYTRCGRMVDAGKM---FLR-----WELEEFSSVVWTAMICGYARNGQPEEAIYLFHVG 490
Query: 71 QNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS 130
+++ + A ++ C ++ L +G+++H H++ + + N +++MY KCGS
Sbjct: 491 RSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGS 550
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
++DA VF +MP ++V+W +I+G + Q + A+E++V+ML G+ P+Q TF II A
Sbjct: 551 VDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISA 610
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 257/485 (52%), Gaps = 65/485 (13%)
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
L P++ + ++ C+ L + GR +HAH+ S L+ N ++ MY K + +A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
++F + KD+ SW +I G+S+ A+EA++
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQ----------------------------SGQASEALA 192
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA 356
LF +M P+ T+ SLL A + S + G Q+H++ +K G+ NV V +++L A
Sbjct: 193 LFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYA 252
Query: 357 ---------------------------------GE---LFRLFSLMLASQTKPDHITFND 380
GE + RLF ML +P H T++
Sbjct: 253 RWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSS 312
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V ACA+ SLE G +H +++K+G ++ N L+DMY K GS+ A+++F + D
Sbjct: 313 VFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQD 372
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+VSW+S+I GYAQ G G EAL+LF +M + V+PN +T + VLTACSH GL++EG +
Sbjct: 373 IVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE 432
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+M+ ++ I VVDLL RAGR++EA FI +M VW +LL SC+ H N+
Sbjct: 433 LMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNM 491
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
D+G AAE I ++DP +S VLL NIYAS+G+ + A++ MKE GV+K P SW+EI
Sbjct: 492 DLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEI 551
Query: 621 QTKIH 625
+ ++H
Sbjct: 552 ENEVH 556
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 192/405 (47%), Gaps = 65/405 (16%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ Y+ +++ C+ LR L+ GR +H HI SS + D VL N ILNMY KCGSLE+A+ +FD+
Sbjct: 106 TLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDK 165
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP +++VSWT +I+G SQ+GQ + A+ L+ +ML G P++FT S+++A G
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
RQLHA +K + ++ ++L+ MY ++ + +A +F+S+A K++ S
Sbjct: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVS----------- 274
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
WN +IAG A M LF +M + P T S+ AC
Sbjct: 275 -----------------WNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 317
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------- 352
S SL QG +H+++IK G + N ++
Sbjct: 318 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 377
Query: 353 -------QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
QH G E +LF ML ++ +P+ ITF V+ AC+ L+ G + K
Sbjct: 378 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 437
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ V ++D+ + G L A + M P W +L+
Sbjct: 438 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 482
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 187/427 (43%), Gaps = 39/427 (9%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ + C L++A ++ D + W L S + +EAL F + + F+
Sbjct: 148 NMYAKCGSLEEAQDLFDKMPTKDMVSWTV-LISGYSQSGQASEALALFPKMLH-LGFQPN 205
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T + L+ A + S GR++H L + + + +L+MY + + +A+++F+
Sbjct: 206 EFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ +NVVSW A+IAG ++ G+ + L++QML+ G P FT+ S+ AC+ +
Sbjct: 266 SLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQ 325
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +HAHVIKS N LI MY K I DA VF + ++DI SW
Sbjct: 326 GKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSW--------- 376
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
N+II+G A EA+ LF +M ++ P+ +T S+L A
Sbjct: 377 -------------------NSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTA 417
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVP--VCNAILQHQAGELFRLFSLMLASQTKPDHIT 377
C+ L +G + K + V V L +AG L + KP
Sbjct: 418 CSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV 477
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG---LMDMYVKCGSLGSARELFN 434
+ ++G+C ++++G Y + LD L ++Y G L A ++
Sbjct: 478 WGALLGSCRMHKNMDLGV----YAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRK 533
Query: 435 FMEDPDV 441
M++ V
Sbjct: 534 MMKESGV 540
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/640 (29%), Positives = 312/640 (48%), Gaps = 103/640 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC------------- 128
T + +CSSL +L G+++H + S + + N +++ Y KC
Sbjct: 54 TLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTC 113
Query: 129 ------------------GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
GSL++AR +F++MP + VS+T M+ G +QN AI ++
Sbjct: 114 SVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFK 173
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M +G++P++ T S+I A S + + R LHA K + I L+ MY
Sbjct: 174 DMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCS 233
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
+ +A +F I +++ +W M++G+SK +D AR +F + + ++ SW TII G
Sbjct: 234 SLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQ 293
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLL--CACTSPLS------------------LY 327
EA+ ++ M + P+ + + L+ C T +S
Sbjct: 294 IERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFI 353
Query: 328 QGMQIHSYI-----------IKKGFYSNVPVCNAILQ--------HQAGELF-------- 360
Q IH Y + G +V NA++ QA +LF
Sbjct: 354 QATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDV 413
Query: 361 --------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+LF M+A +P+ IT V A A + +L G H Y
Sbjct: 414 FSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEY 473
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED--PDVVSWSSLIVGYAQFGCGE 458
I+ + L+ + L+DMY KCGS+ A +LF ++D V W+++I G A G
Sbjct: 474 ILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHAN 533
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+LKLF +++ ++PN +T +GVL+AC H GLV+ G + ++ M+N Y I P + C+
Sbjct: 534 VSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCM 593
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNS 578
+DLL RAGR+ EA + I +M D+V+W +LLA+C+THGNV++G+RAAEN+ K+D ++
Sbjct: 594 IDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHG 653
Query: 579 AALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
A VLL NIYA +G+W++ + +M+ + ++K PG S +
Sbjct: 654 AGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 693
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 183/393 (46%), Gaps = 49/393 (12%)
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+ T S +++CS L + G+Q+H+ V KS S++ +N+LI+ Y K I +A ++F
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 241 SIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+ + D S M+ G+ K LD AR +F +M S+ T++ G+A + EA+ +
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG 357
F +M +IP+ +T+ S++ A + + +H+ K G + L A
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEA--------LNIVAT 223
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
L ++ + S + F+++ +V N ++
Sbjct: 224 NLVHMYC--VCSSLGNARVLFDEIP------------------------ERNVVTWNVML 257
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
+ Y K G + AR+LF + DVVSW ++I GY Q EAL+++R M +GV PN V
Sbjct: 258 NGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEV 317
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNE----YGIIPTRERRSCVVDLLARAGRVHEAED 533
+V +++AC V EG Q + I+ Y I ++ ++ A G ++ A
Sbjct: 318 MIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFI-----QATIIHFYAACGEINLA-- 370
Query: 534 FIN-QMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
F+ ++ D + W +L++ +G ++ ++
Sbjct: 371 FLQFELGSKDHVSSWNALISGFVRNGMIEQARQ 403
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
H L F+ +Q +T + +C+++ +L G Q+H + K+GL ++FV
Sbjct: 31 HPIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVK 90
Query: 414 NGLMDMYVKC-------------------------------GSLGSARELFNFMEDPDVV 442
N L+ YVKC GSL +AR LF M V
Sbjct: 91 NSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCV 150
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
S++++++G AQ C EA+ +F+ MR +GV PN VTL V++A SHVG + L+ +
Sbjct: 151 SYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHA-L 209
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ G+ + +V + + A +++ + ++V W +L G VD+
Sbjct: 210 SFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIP-ERNVVTWNVMLNGYSKSGLVDL 268
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
+ E I D + ++ + Y + E R+ SM GV
Sbjct: 269 ARDLFERIPAKDVVSWGTII---DGYVQIERLGEALRMYRSMLRTGV 312
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 182/584 (31%), Positives = 284/584 (48%), Gaps = 67/584 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ + AC+ L + VH H++ S D + ++M+ KC S++ A VF+ M
Sbjct: 660 TFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERM 719
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+ +W AM++G Q+G + A L+ +M + + PD T ++I++ S + L
Sbjct: 720 PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLE 779
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDIT--SWGSMIDGFSK 259
+HA I+ + N I+ Y K + A VF +I R D T SW SM +S
Sbjct: 780 AMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS- 838
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
VF E A +A L+ M E PD T +L +
Sbjct: 839 ------VFGE---------------------AFDAFGLYCLMLREEFKPDLSTFINLAAS 871
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
C +P +L QG IHS+ I G ++ N +
Sbjct: 872 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSW 931
Query: 353 ---------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ E LF M+ S KPD +T ++ C SLE G +
Sbjct: 932 TVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADI 991
Query: 404 TGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
G D V + N L+DMY KCGS+ AR++F+ + VV+W+++I GYA G EALK
Sbjct: 992 YGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALK 1051
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF +M +PNH+T + VL AC+H G +E+G + + IM+ Y I P + SC+VDLL
Sbjct: 1052 LFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLL 1111
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G++ EA + I M+ D +W +LL +CK H NV + ++AAE++ ++P +A V
Sbjct: 1112 GRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYV 1171
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+ NIYA++G W+ AR+ MK+R ++K PG+S I++ K H+
Sbjct: 1172 EMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHS 1215
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 196/458 (42%), Gaps = 79/458 (17%)
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V +W I ++ L+ +M + G P+ FTF + +AC+ L VG +H
Sbjct: 622 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 681
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
AH+IKS S + A + M+ K + + D+A
Sbjct: 682 AHLIKSPFWSDVFVGTATVDMFVKCNSV----------------------------DYAA 713
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF M + +WN +++G + ++A SLF EM E+ PD +TV +L+ + +
Sbjct: 714 KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK 773
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------------------ 354
SL +H+ I+ G V V N +
Sbjct: 774 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 833
Query: 355 --------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+A + F L+ LML + KPD TF ++ +C +L G +H + + G
Sbjct: 834 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 893
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D+ +N + MY K SAR LF+ M VSW+ +I GYA+ G +EAL LF
Sbjct: 894 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 953
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEG------LQLYRIMQNEYGIIPTRERRSCVVD 520
M SG +P+ VTL+ +++ C G +E G +Y ++ I + ++D
Sbjct: 954 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC------NALID 1007
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++ G +HEA D + + +V W +++A +G
Sbjct: 1008 MYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNG 1044
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 283/528 (53%), Gaps = 39/528 (7%)
Query: 96 LQLGR-KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
L++GR + I + D + + +++ Y K G + AR +F+ MP+RNVV+WTAMI
Sbjct: 249 LKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMID 308
Query: 155 GCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G + G L+++M + G + + T + ACS G Q+H V +
Sbjct: 309 GHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFE 368
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEM 270
+ NA+I MY +F +++A +F + RKD+ SW ++I G+ +++ +F +
Sbjct: 369 FDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKT 428
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+ ++ SW T+I G ++ +++ LF M ++ I A T+ +S
Sbjct: 429 QQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDI-----------AWTAVIS----- 472
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
GF N AI F ML +P+ +T + V+ A A +A+
Sbjct: 473 ---------GFVGNGEYEEAIY---------WFIEMLRKVVRPNPLTLSSVLSASAGLAT 514
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L G Q+H ++K G+ D+ + N L+ MY KCG++ ++F + P++VS++S+I G
Sbjct: 515 LNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITG 574
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
+AQ G GEEAL+LF +M + G +PN +T +GVL+AC+HVGL+E+G ++ M++ Y I P
Sbjct: 575 FAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEP 634
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+C+VDLL RAG + +A D I M + VW +LL + + H +DV K AA+ I
Sbjct: 635 GPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQI 694
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
K++P N+A +L +Y+S+G+ + ++ + +GV+K G SWI
Sbjct: 695 FKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 742
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 191/420 (45%), Gaps = 43/420 (10%)
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ--- 174
H+ I +G+ G L++A +F MP +N +SWTAM+ +NG A +++ +M Q
Sbjct: 114 HSQITK-HGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTT 172
Query: 175 ---------------------SGLMPDQFTFGSIIRAC--SGLCCVGLGRQLHAHVIKSE 211
S L + SI A +GL G+ +++
Sbjct: 173 ASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETP 232
Query: 212 -HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVF 267
+ NALI+ Y K R+ +A +F + +D+ SW SM+DG+ K+ AR +F
Sbjct: 233 VEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELF 292
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI---PDGLTVRSLLCACTSPL 324
M N+ +W +I G LF M + P LTV + AC+
Sbjct: 293 ERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTV--MFEACSEFG 350
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G+Q+H + + GF +V + NAI+ ++ FS ++ ++ D + DV+
Sbjct: 351 EYKEGIQMHGLVSRMGFEFDVFLGNAIII-----MYCRFSFVVEARKIFDMMNRKDVVSW 405
Query: 385 CAAMASLEMGTQL-HCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A +A ++ Y++ + DV ++ + G +G + ELF M D +
Sbjct: 406 NALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDI 465
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+W+++I G+ G EEA+ F M VRPN +TL VL+A + + + +GLQ++ ++
Sbjct: 466 AWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLV 525
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 127/315 (40%), Gaps = 90/315 (28%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
++ P+T + ACS + G ++H + + D L N I+ MY + + +AR
Sbjct: 333 KVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 392
Query: 137 VFDEMPQRNVVSWTAMIAGCSQN-------------------------------GQENAA 165
+FD M +++VVSW A+IAG QN G+ +
Sbjct: 393 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKS 452
Query: 166 IELY-------------------------------VQMLQSGLMPDQFTFGSIIRACSGL 194
IEL+ ++ML+ + P+ T S++ A +GL
Sbjct: 453 IELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGL 512
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G Q+H V+K L QN+L++MYTK + D +F+SI +I S+ SMI
Sbjct: 513 ATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMI 572
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
GF++ F EA+ LF +M + P+ +T
Sbjct: 573 TGFAQNGFGE----------------------------EALELFHKMLNEGQKPNEITFL 604
Query: 315 SLLCACTSPLSLYQG 329
+L ACT L QG
Sbjct: 605 GVLSACTHVGLLEQG 619
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 30 QAGEVVDSF--LRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+ G+ ++ F + + DDI + S Y EA+ F + R P T + ++
Sbjct: 448 KMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKV-VRPNPLTLSSVL 506
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SA + L +L G ++H ++ + D + N +++MY KCG++ D +F + N+V
Sbjct: 507 SASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIV 566
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
S+ +MI G +QNG A+EL+ +ML G P++ TF ++ AC+
Sbjct: 567 SFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACT 611
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 27/197 (13%)
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV- 480
+ G L A +F+ M + +SW++++ Y + G +A K+F +M P T
Sbjct: 122 RNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKM------PQRTTASY 175
Query: 481 -GVLTAC--SHVGLVEEGLQLYRIMQNEYGIIPTRERRS----CVVDLLARAGRVHEAED 533
++TA S+ ++ E +L+ M RER S ++ LARAG V AE+
Sbjct: 176 NAMITAYTRSNPMMIGEASKLFAEM---------RERNSISYAAMITGLARAGMVDNAEE 226
Query: 534 FINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
+ + D V +L++ G ++ R E + + D + +++V + Y G
Sbjct: 227 LYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMV---DGYCKKG 283
Query: 593 KWEEVARLMGSMKERGV 609
K L M ER V
Sbjct: 284 KIGHARELFERMPERNV 300
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 185/622 (29%), Positives = 298/622 (47%), Gaps = 76/622 (12%)
Query: 47 DFDLFSSLCKQNLYNEA----LVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D LF+ L + NE+ L F L+ +T+ + STYA ISA S R + G +
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVI 141
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H + C + +L ++I+ MY K +EDAR VFD MP+++ + W MI+G +N
Sbjct: 142 HGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 163 NAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
+I+++ ++ +S D T I+ A + L + LG Q+H+ K+ SH
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTI 281
I++Y+K K+ A T+F E P++ ++N +
Sbjct: 262 FISLYSKC----------------------------GKIKMASTLFREFRRPDIVAYNAM 293
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS--LYQGMQIHSYIIKK 339
I G S ++SLF +EL+ G ++S P+S L IH Y +K
Sbjct: 294 IHGYTSNGETELSLSLF-----KELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKS 348
Query: 340 GFYSNVPVCNAILQ--------HQAGELF----------------------------RLF 363
F S+ V A+ A +LF LF
Sbjct: 349 NFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
M S+ P+ +T ++ ACA + +L +G +H + T ++V L+ MY KC
Sbjct: 409 REMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
GS+ AR LF+FM + V+W+++I GY G G+EAL +F M +SG+ P VT + VL
Sbjct: 469 GSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVL 528
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
ACSH GLV+EG +++ M + YG P+ + +CVVD+L RAG + A FI M
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPG 588
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
VW++LL +C+ H + ++ + +E + ++DP N VLL NI+++ + + A + +
Sbjct: 589 PSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 604 MKERGVRKVPGQSWIEIQTKIH 625
K+R + K PG + IEI H
Sbjct: 649 AKKRKLAKAPGYTLIEIGETPH 670
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
I+ N+ + S+ Q H I+ G D+ ++ L G++ AR++F
Sbjct: 18 ISKNNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNHVTLVGVLTACS-----HV 489
++ PDV ++ L+ G++ +L +F +R S+ ++PN T ++A S
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
G V G + +E + S +V + + RV +A ++M + D ++W +
Sbjct: 138 GCVIHGQAIVDGCDSELLL------GSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNT 190
Query: 550 LLASCK 555
+++ +
Sbjct: 191 MISGYR 196
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 185/609 (30%), Positives = 295/609 (48%), Gaps = 75/609 (12%)
Query: 53 SLCKQNLYNEALVAFDFLQ----NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
S + LY++ L F L ++ +F + PS +I A SS + G ++H L
Sbjct: 25 SFLSKGLYHQTLQLFSELHLCGHSSISFFL-PS----VIKASSSAQCHTFGTQLHCLALK 79
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
+ + V+ N I+ MY K + AR VFD MP R+ ++W ++I G NG A+E
Sbjct: 80 TGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEA 139
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-GSHLISQNALIAMYT 227
+ GL+P S++ C +GRQ+HA V+ +E G + AL+ Y
Sbjct: 140 LNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYF 199
Query: 228 KFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVAS 287
+ L A VF DG ME N+ SW T+I+G +
Sbjct: 200 RCGDSLMALRVF---------------DG-------------MEVKNVVSWTTMISGCIA 231
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
+ +EA + F M + P+ +T +LL AC P + G +IH Y + GF S
Sbjct: 232 HQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSF 291
Query: 348 CNAILQH--QAGE-----------------------------------LFRLFSLMLASQ 370
+A++ Q GE +LF+ M +
Sbjct: 292 SSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEE 351
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
+P+++T V+ AC ++SL+ G LH YI K G + V N L++MY KCG L +R
Sbjct: 352 IEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSR 411
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
++F M + D V+WSSLI Y GCGE+AL++F M GV+P+ +T + VL+AC+H G
Sbjct: 412 KMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAG 471
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
LV EG ++++ ++ + I T E +C+VDLL R+G++ A + M +W SL
Sbjct: 472 LVAEGQRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSL 531
Query: 551 LASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVR 610
+++CK HG +D+ + A +++ +P N+ LL IYA G W + ++ +MK + ++
Sbjct: 532 VSACKLHGRLDIAEMLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLK 591
Query: 611 KVPGQSWIE 619
K G S IE
Sbjct: 592 KCYGFSRIE 600
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 283/528 (53%), Gaps = 39/528 (7%)
Query: 96 LQLGR-KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
L++GR + I + D + + +++ Y K G + AR +F+ MP+RNVV+WTAMI
Sbjct: 170 LKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMID 229
Query: 155 GCSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G + G L+++M + G + + T + ACS G Q+H V +
Sbjct: 230 GHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFE 289
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEM 270
+ NA+I MY +F +++A +F + RKD+ SW ++I G+ +++ +F +
Sbjct: 290 FDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKT 349
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
+ ++ SW T+I G ++ +++ LF M ++ I A T+ +S
Sbjct: 350 QQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDI-----------AWTAVIS----- 393
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
GF N AI F ML +P+ +T + V+ A A +A+
Sbjct: 394 ---------GFVGNGEYEEAIY---------WFIEMLRKVVRPNPLTLSSVLSASAGLAT 435
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L G Q+H ++K G+ D+ + N L+ MY KCG++ ++F + P++VS++S+I G
Sbjct: 436 LNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITG 495
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
+AQ G GEEAL+LF +M + G +PN +T +GVL+AC+HVGL+E+G ++ M++ Y I P
Sbjct: 496 FAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEP 555
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+C+VDLL RAG + +A D I M + VW +LL + + H +DV K AA+ I
Sbjct: 556 GPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQI 615
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
K++P N+A +L +Y+S+G+ + ++ + +GV+K G SWI
Sbjct: 616 FKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 663
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 213/476 (44%), Gaps = 45/476 (9%)
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ--- 174
H+ I +G+ G L++A +F MP +N +SWTAM+ +NG A +++ +M Q
Sbjct: 35 HSQITK-HGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTT 93
Query: 175 ---------------------SGLMPDQFTFGSIIRAC--SGLCCVGLGRQLHAHVIKSE 211
S L + SI A +GL G+ +++
Sbjct: 94 ASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETP 153
Query: 212 -HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVF 267
+ NALI+ Y K R+ +A +F + +D+ SW SM+DG+ K+ AR +F
Sbjct: 154 VEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELF 213
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI---PDGLTVRSLLCACTSPL 324
M N+ +W +I G LF M + P LTV + AC+
Sbjct: 214 ERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTV--MFEACSEFG 271
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G+Q+H + + GF +V + NAI+ ++ FS ++ ++ D + DV+
Sbjct: 272 EYKEGIQMHGLVSRMGFEFDVFLGNAIII-----MYCRFSFVVEARKIFDMMNRKDVVSW 326
Query: 385 CAAMASLEMGTQL-HCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A +A ++ Y++ + DV ++ + G +G + ELF M D +
Sbjct: 327 NALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDI 386
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+W+++I G+ G EEA+ F M VRPN +TL VL+A + + + +GLQ++ ++
Sbjct: 387 AWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLV 446
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G+ ++ +V + + G V + + +IV + S++ +G
Sbjct: 447 V-KMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSIN-SPNIVSFNSMITGFAQNG 500
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 127/315 (40%), Gaps = 90/315 (28%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
++ P+T + ACS + G ++H + + D L N I+ MY + + +AR
Sbjct: 254 KVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 313
Query: 137 VFDEMPQRNVVSWTAMIAGCSQN-------------------------------GQENAA 165
+FD M +++VVSW A+IAG QN G+ +
Sbjct: 314 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKS 373
Query: 166 IELY-------------------------------VQMLQSGLMPDQFTFGSIIRACSGL 194
IEL+ ++ML+ + P+ T S++ A +GL
Sbjct: 374 IELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGL 433
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G Q+H V+K L QN+L++MYTK + D +F+SI +I S+ SMI
Sbjct: 434 ATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMI 493
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
GF++ F EA+ LF +M + P+ +T
Sbjct: 494 TGFAQNGFGE----------------------------EALELFHKMLNEGQKPNEITFL 525
Query: 315 SLLCACTSPLSLYQG 329
+L ACT L QG
Sbjct: 526 GVLSACTHVGLLEQG 540
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 30 QAGEVVDSF--LRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+ G+ ++ F + + DDI + S Y EA+ F + R P T + ++
Sbjct: 369 KMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKV-VRPNPLTLSSVL 427
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SA + L +L G ++H ++ + D + N +++MY KCG++ D +F + N+V
Sbjct: 428 SASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIV 487
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
S+ +MI G +QNG A+EL+ +ML G P++ TF ++ AC+
Sbjct: 488 SFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACT 532
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 27/197 (13%)
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV- 480
+ G L A +F+ M + +SW++++ Y + G +A K+F +M P T
Sbjct: 43 RNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKM------PQRTTASY 96
Query: 481 -GVLTAC--SHVGLVEEGLQLYRIMQNEYGIIPTRERRS----CVVDLLARAGRVHEAED 533
++TA S+ ++ E +L+ M RER S ++ LARAG V AE+
Sbjct: 97 NAMITAYTRSNPMMIGEASKLFAEM---------RERNSISYAAMITGLARAGMVDNAEE 147
Query: 534 FINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
+ + D V +L++ G ++ R E + + D + +++V + Y G
Sbjct: 148 LYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMV---DGYCKKG 204
Query: 593 KWEEVARLMGSMKERGV 609
K L M ER V
Sbjct: 205 KIGHARELFERMPERNV 221
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 299/597 (50%), Gaps = 84/597 (14%)
Query: 73 NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSL 131
N N + + L+ C S++ L +++H +L++ +P++ L+ K L
Sbjct: 25 NPNRQALSDKFNSLLQQCLSIKQL---KQIHAQLLTNSIHKPNSFLY--------KIADL 73
Query: 132 ED---ARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIELYVQMLQSGLMPDQFTFGSI 187
+D A + F + S+ MI G S + + A+E Y +M GL P+ T+ +
Sbjct: 74 KDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFL 133
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
ACS L V GR H VI+ ++LI MY + ++ DA
Sbjct: 134 FIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDA------------ 181
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
R VF+E+ +L SWN++I+G + +A EA+ LF EM +
Sbjct: 182 ----------------RKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---------- 357
P+ +++ S+L AC L G + ++++ N + +A++ H G
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI-HMYGKCGDLVSARR 284
Query: 358 ---------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
E +LF M S T PD IT ++ ACA++ +
Sbjct: 285 IFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGA 344
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L++G Q+ Y + G DV+V L+DMY KCGSL +A +F M + VSW+++I
Sbjct: 345 LDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISA 404
Query: 451 YAQFGCGEEALKLFRRMRSSG--VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
A G +EAL LF+ M + G V PN +T VGVL+AC H GLV+EG +L+ +M + +G+
Sbjct: 405 LAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGL 464
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
+P E SC+VDL +RAG + EA DF+ M D V+ +LL +C+ N+D+ +R +
Sbjct: 465 VPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMK 524
Query: 569 NILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+L+++P+NS V+ +YA+ +W++ AR+ MK++GV K PG SWI+I +++H
Sbjct: 525 LLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLH 581
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 295/584 (50%), Gaps = 66/584 (11%)
Query: 80 PSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDARM 136
P++Y ++AC +LG+++H +L S + + N ++ MY +CG + A
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
+ +M +VV+W ++I G QN A+E + M+ +G D+ + SII A L
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 401
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G +LHA+VIK S+L N LI MY+K N+ + R
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK-------CNLTCYMGR------------ 442
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F M +L SW T+IAG A EA+ LF ++ + + D + + S+
Sbjct: 443 ---------AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNV------------------------------- 345
L A + S+ +IH +I++KG V
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVV 553
Query: 346 ----PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ ++ L E LF M+ + D + ++ A A++++L G ++HCY+
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ G L+ + ++DMY CG L SA+ +F+ +E ++ ++S+I Y GCG+ A+
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+LF +MR V P+H++ + +L ACSH GL++EG +IM++EY + P E C+VD+
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RA V EA +F+ M + VW +LLA+C++H ++G+ AA+ +L+++P N L
Sbjct: 734 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 793
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ N++A G+W +V ++ MK G+ K PG SWIE+ K+H
Sbjct: 794 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 837
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 262/586 (44%), Gaps = 107/586 (18%)
Query: 55 CKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
C + EA D +NN+ +A ++ C R++ GR++H I K P
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPVE----AFAYVLELCGKRRAVSQGRQLHSRIF--KTFPS 112
Query: 115 ---AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
L ++ MYGKCGSL+DA VFDEMP R +W MI NG+ +A+ LY
Sbjct: 113 FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ +F ++++AC+ L + G +LH+ ++K + S NAL++MY K D
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND- 231
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
D+++ + DGF E + WN+I++ ++ +
Sbjct: 232 --------------DLSAARRLFDGFQ------------EKGDAVLWNSILSSYSTSGKS 265
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN-VPVCNA 350
E + LF EM P+ T+ S L AC G +IH+ ++K +S+ + VCNA
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 351 IL--------QHQAGELFR----------------------------LFSLMLASQTKPD 374
++ QA + R FS M+A+ K D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
++ ++ A +++L G +LH Y++K G ++ V N L+DMY KC F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS------- 487
M D D++SW+++I GYAQ C EAL+LFR + + + + L +L A S
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 488 ----HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
H ++ +GL L ++QNE + + R + A RV E+ D
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRN------MGYATRVFESIK-------GKD 551
Query: 544 IVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLC 585
+V W S+++S +GN V++ +R E L D ++ LLC
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSAD-----SVALLC 592
>gi|296088310|emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 291/556 (52%), Gaps = 51/556 (9%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDARMVFDEMPQ 143
L+ C ++ L +++H ++++ D + + +++ Y G+L A+ VF+++ +
Sbjct: 11 LLEKCKTMAEL---KRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDR 67
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++ W +MI G S + + A+ +Y +M Q G PD FTF +++ACS + LG+ +
Sbjct: 68 PSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCV 127
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H ++K+ + + AL+ MY + A VF DI W
Sbjct: 128 HNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFD-----DIPKW------------- 169
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
N+ +W ++IAG S +EA+ ++ +M + P+ +T+ ++L AC
Sbjct: 170 ----------NVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARS 219
Query: 324 LSLYQGMQIHSYIIKKG---FYS----NVPVCNAILQ----------HQAGELFRLFSLM 366
L G +H + G F S NV + AI+ QA E LFS M
Sbjct: 220 RDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCAYNQYGQANEALDLFSDM 279
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+ PD TF V+GACA + +L G LH Y+ KT L D + L+DMY K G
Sbjct: 280 RIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDA 339
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTA 485
A+++F+ ++ DV +W+SLI+G A G GEEAL F++M+ + + P+ +T +GVL+A
Sbjct: 340 ERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSA 399
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
CSHVG VE+G + M+N +GI PT + C+VDLL+RAGR+ EAE + +M + +
Sbjct: 400 CSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTA 459
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
+W +LL CK + N+DV R + +++ S VLL NIYA + +WEEV MK
Sbjct: 460 IWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMK 519
Query: 606 ERGVRKVPGQSWIEIQ 621
ER ++K G S +E++
Sbjct: 520 ERKIQKSLGHSSVEMK 535
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 162/351 (46%), Gaps = 20/351 (5%)
Query: 278 WNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL--CACTSPLSLYQGMQIHSY 335
+N+I++ + C E L M +I D + + L+ CA + +L + +
Sbjct: 5 YNSILSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQ 64
Query: 336 IIKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
I + Y N + + E ++ M PDH TF V+ AC+ + +G
Sbjct: 65 IDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLG 124
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
+H I+KTG +DV+ L+ MY CG + +A ++F+ + +VV+W+SLI G
Sbjct: 125 QCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISN 184
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
C EA+++++ M V PN +T+V VL AC+ + G ++ + G+ P +
Sbjct: 185 DCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHD-RTGQMGLDPFQSN 243
Query: 515 R-------SCVVDLLARA-----GRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGN 559
+ +VD+ A+ G+ +EA D + M FD D + ++ +C G
Sbjct: 244 SNFNVILATAIVDMYAKCAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGA 303
Query: 560 VDVGKRAAENILKIDPTNSAAL-VLLCNIYASSGKWEEVARLMGSMKERGV 609
+ G+ + K + T+ A+ L ++YA SG E ++ ++++ V
Sbjct: 304 LVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDV 354
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 169/372 (45%), Gaps = 62/372 (16%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ ACS + LG+ VH+ I+ + + D +L MY CG +E A VFD++
Sbjct: 107 TFPFVLKACSLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDI 166
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+ NVV+WT++IAGC N + A+ +Y M + P++ T +++ AC+ + GR
Sbjct: 167 PKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGR 226
Query: 202 QLHAHV-------IKSEHGSHLISQNALIAMYTK-----FDRILDAWNVFSS-------- 241
+H +S ++I A++ MY K + + +A ++FS
Sbjct: 227 WVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCAYNQYGQANEALDLFSDMRIAGFDP 286
Query: 242 ---------------------------IARKDITS----WGSMIDGFSK---LDFARTVF 267
+++ ++T +++D ++K + A+ VF
Sbjct: 287 DKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVF 346
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG-DRELIPDGLTVRSLLCACTSPLSL 326
+E++ ++ +W ++I G+A + EA++ F +M D LIPD +T +L AC+ +
Sbjct: 347 SELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKV 406
Query: 327 YQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
G + +I K + P C L +AG L L+ +P+ ++ +
Sbjct: 407 EDGK--NHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSAL 464
Query: 382 MGACAAMASLEM 393
+ C ++++
Sbjct: 465 LNGCKIYQNIDV 476
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 117/224 (52%), Gaps = 11/224 (4%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNN--TNFRIRPSTYADLISACSSLRSLQLGRKVHDHI 106
D+++ C N Y +A A D + F +T+ +I AC+ L +L G+ +H ++
Sbjct: 256 DMYAK-CAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYV 314
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ D + +++MY K G E A+ VF E+ +++V +WT++I G + +G A+
Sbjct: 315 SKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEAL 374
Query: 167 ELYVQMLQ-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN--ALI 223
+ +M + + L+PD+ T+ ++ ACS + V G+ H +K+ HG +Q+ ++
Sbjct: 375 TFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDGKN-HFISMKNVHGIEPTTQHYGCMV 433
Query: 224 AMYTKFDRILDAWNVFSSIARKDITS-WGSMIDG---FSKLDFA 263
+ ++ R+ +A + + + T+ W ++++G + +D A
Sbjct: 434 DLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNGCKIYQNIDVA 477
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 182/637 (28%), Positives = 313/637 (49%), Gaps = 71/637 (11%)
Query: 28 LDQAGEVVDSFLRRFDDI-WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA-- 84
L A + D F + D + W+ S L + ++L + + P++Y
Sbjct: 233 LSAARRLFDGFQEKGDAVLWN----SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQ 143
++AC +LG+++H +L S + + N ++ MY +CG + A + +M
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+VV+W ++I G QN A+E + M+ +G D+ + SII A L + G +L
Sbjct: 349 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
HA+VIK S+L N LI MY+K N+ + R
Sbjct: 409 HAYVIKHGWDSNLQVGNTLIDMYSK-------CNLTCYMGR------------------- 442
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
F M +L SW T+IAG A EA+ LF ++ + + D + + S+L A +
Sbjct: 443 --AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 324 LSLYQGMQIHSYIIKKGFYSNV-----------------------------------PVC 348
S+ +IH +I++KG V +
Sbjct: 501 KSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMIS 560
Query: 349 NAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
++ L E LF M+ + D + ++ A A++++L G ++HCY+++ G L
Sbjct: 561 SSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCL 620
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ + ++DMY CG L SA+ +F+ +E ++ ++S+I Y GCG+ A++LF +MR
Sbjct: 621 EGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR 680
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
V P+H++ + +L ACSH GL++EG +IM++EY + P E C+VD+L RA V
Sbjct: 681 HENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 740
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA +F+ M + VW +LLA+C++H ++G+ AA+ +L+++P N LVL+ N++
Sbjct: 741 VEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVF 800
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A G+W +V ++ MK G+ K PG SWIE+ K+H
Sbjct: 801 AEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 837
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 262/586 (44%), Gaps = 107/586 (18%)
Query: 55 CKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPD 114
C + EA D +NN+ +A ++ C R++ GR++H I K P
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPVE----AFAYVLELCGKRRAVSQGRQLHSRIF--KTFPS 112
Query: 115 ---AVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
L ++ MYGKCGSL+DA VFDEMP R +W MI NG+ +A+ LY
Sbjct: 113 FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M G+ +F ++++AC+ L + G +LH+ ++K + S NAL++MY K D
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND- 231
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
D+++ + DGF E + WN+I++ ++ +
Sbjct: 232 --------------DLSAARRLFDGFQ------------EKGDAVLWNSILSSYSTSGKS 265
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN-VPVCNA 350
E + LF EM P+ T+ S L AC G +IH+ ++K +S+ + VCNA
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 351 IL--------QHQAGELFR----------------------------LFSLMLASQTKPD 374
++ QA + R FS M+A+ K D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
++ ++ A +++L G +LH Y++K G ++ V N L+DMY KC F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS------- 487
M D D++SW+++I GYAQ C EAL+LFR + + + + L +L A S
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 488 ----HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
H ++ +GL L ++QNE + + R + A RV E+ D
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRN------MGYATRVFESIK-------GKD 551
Query: 544 IVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLC 585
+V W S+++S +GN V++ +R E L D ++ LLC
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSAD-----SVALLC 592
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 176/625 (28%), Positives = 300/625 (48%), Gaps = 102/625 (16%)
Query: 41 RFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGR 100
R D + + S+ + + A+ F L + + R ++ L+SA L ++ +
Sbjct: 118 RRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRH 177
Query: 101 --KVHDHILSSKCQPDAVLHNHILNMYGKCGSLE---DARMVFDEMPQRNVVSWTAMIAG 155
++ +L S + N ++ +Y KC +LE DAR V DEMP ++ ++WT M+ G
Sbjct: 178 CAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVG 237
Query: 156 CSQNGQENAA-------------------------------IELYVQMLQSGLMPDQFTF 184
+ G AA EL+ +M+ + D+FTF
Sbjct: 238 YVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTF 297
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHG----SHLISQNALIAMYTKFDRILDAWNVFS 240
S++ AC+ G+ +H + + + + L NAL+ +Y+K I
Sbjct: 298 TSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIA------- 350
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
AR +F+ M+S ++ SWNTI++G S ++A+ +F E
Sbjct: 351 ---------------------VARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEE 389
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELF 360
M + + M + S + GF +
Sbjct: 390 MPYKNEL--------------------SWMVMVSGYVHGGFSEDA--------------L 415
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
+LF+ M A KP T+ + AC + SL+ G QLH ++++ G N L+ MY
Sbjct: 416 KLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMY 475
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
+CG++ A +F M + D VSW+++I Q G G EAL+LF RM + G+ P+ ++ +
Sbjct: 476 ARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFL 535
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
VLTAC+H GLV+EG Q + M+ ++GIIP + + ++DLL RAGR+ EA D I M F
Sbjct: 536 TVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPF 595
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARL 600
+ +W+++L+ C+T G++++G AA+ + K+ P + +LL N Y+++G+W + AR+
Sbjct: 596 EPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARV 655
Query: 601 MGSMKERGVRKVPGQSWIEIQTKIH 625
M++RGV+K PG SWIE K+H
Sbjct: 656 RKLMRDRGVKKEPGCSWIEAGNKVH 680
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 225/524 (42%), Gaps = 57/524 (10%)
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ--RNVVSWTAMIAGCSQNGQENAAIE 167
+ P V ++ Y G L A FD +PQ R+ V A+I+ ++ A+
Sbjct: 83 RADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVA 142
Query: 168 LYVQMLQSG-LMPDQFTFGSIIRACSGLCCVGLGR--QLHAHVIKSEHGSHLISQNALIA 224
++ +L SG L PD ++F +++ A L + + QL V+KS G L NAL+A
Sbjct: 143 VFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVA 202
Query: 225 MYTK---FDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASW 278
+Y K + DA V + KD +W +M+ G+ + + AR+VF E++ W
Sbjct: 203 LYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVW 262
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N +I+G EA LF M + D T S+L AC + G +H
Sbjct: 263 NAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVH----- 317
Query: 339 KGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
G++ RL + P + + C +A
Sbjct: 318 ------------------GQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARR----- 354
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
I + DV N ++ YV+ L A E+F M + +SW ++ GY G E
Sbjct: 355 --IFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSE 412
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+ALKLF RMR+ V+P T G ++AC +G ++ G QL+ + + G + + +
Sbjct: 413 DALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLV-QLGFEGSNSAGNAL 471
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK-----I 573
+ + AR G V EA M + D V W +++++ HG+ G+ A E + I
Sbjct: 472 ITMYARCGAVKEANLMFLVMP-NIDSVSWNAMISALGQHGH---GREALELFDRMVAEGI 527
Query: 574 DPTNSAALVLL--CNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
P + L +L CN SG +E + SMK R +PG+
Sbjct: 528 YPDRISFLTVLTACN---HSGLVDEGFQYFESMK-RDFGIIPGE 567
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 8/176 (4%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYAD 85
LD+A EV + + + W + S +AL F+ ++ ++P TYA
Sbjct: 380 LDKAVEVFEEMPYKNELSW-MVMVSGYVHGGFSEDALKLFNRMRAED---VKPCDYTYAG 435
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
ISAC L SL+ G+++H H++ + N ++ MY +CG++++A ++F MP +
Sbjct: 436 AISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNID 495
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGL 199
VSW AMI+ Q+G A+EL+ +M+ G+ PD+ +F +++ AC SGL G
Sbjct: 496 SVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGF 551
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 268/529 (50%), Gaps = 65/529 (12%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
+K+H H++ L +L+ G + A ++F ++ N+ ++ A+I + N
Sbjct: 27 KKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHN 86
Query: 160 GQENAAIELYVQMLQ---SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
++AI ++VQML + + PD+FTF +I++C+G+ C LG Q+H V K H
Sbjct: 87 RHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHC 146
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
I++NALI MYTKF + +A VF ++ +D +
Sbjct: 147 ITENALIDMYTKFGDLTNACKVFEEMSHRD----------------------------VI 178
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
SWN++I G N A LF +M R ++ + T+ ++ Y M
Sbjct: 179 SWNSLIFGYVKLGQMNSARELFDDMPVRTIV-----------SWTTMITGYGRM------ 221
Query: 337 IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
G Y G+ +F M +PD I+ V+ ACA + +LE+G
Sbjct: 222 ---GCY--------------GDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKW 264
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H Y K G + N L++MY KCG + A LF+ + + DV+SWS++I G A G
Sbjct: 265 IHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGK 324
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G EA++LF M V PN +T +GVL ACSH GL +EGL+ + +M Y I P E
Sbjct: 325 GYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYG 384
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C++DLL R+G + +A D I++M D +W SLL+SC+ H N+ + A + +++++P
Sbjct: 385 CLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPE 444
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
S VLL N+YA GKWE+V+ + ++ + ++K PG S IE+ +
Sbjct: 445 ESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQ 493
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 149/349 (42%), Gaps = 64/349 (18%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +I +C+ + +LG +VH + + N +++MY K G L +A VF+EM
Sbjct: 113 TFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEM 172
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIEL-------------------------------YV 170
R+V+SW ++I G + GQ N+A EL +
Sbjct: 173 SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFR 232
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M G+ PD+ + +++ AC+ L + +G+ +H + K+ NALI MY K
Sbjct: 233 EMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCG 292
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
I +AWN+F + KD+ SW +M I G+A+
Sbjct: 293 CIDEAWNLFDQLVEKDVISWSTM----------------------------IGGLANHGK 324
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV--- 347
EA+ LF EM + P+ +T +L AC+ +G++ ++ ++ +
Sbjct: 325 GYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFD-VMSASYHIEPEIEHY 383
Query: 348 -CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
C L ++G L + + KPD +N ++ +C +L++
Sbjct: 384 GCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAV 432
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 181/616 (29%), Positives = 299/616 (48%), Gaps = 75/616 (12%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTN-FRIRPSTYADLISACSSLRSLQLGRKVHDHIL 107
D +L LY++ L F L + + F P +I ACS G ++H
Sbjct: 34 DHIKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAF 93
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
+ D ++ N I++MY K +E AR VFD MP R+ ++W +MI QNG A++
Sbjct: 94 ITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQ 153
Query: 168 LYVQMLQSGLMPDQFTFGSIIRACSGLCCVG--LGRQLHAHV-----IKSEHGSHLISQN 220
+ G +P S++ C +G +GRQ+H V I+ +H L
Sbjct: 154 MLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFL--ST 211
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
A + Y + L A +VF +EME N SW
Sbjct: 212 AFVDFYFRCGDSLMARSVF----------------------------DEMEVKNEVSWTA 243
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I+G A+ + + A++ + EM + P+ +T+ +LL AC P + G +IH Y ++G
Sbjct: 244 VISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRG 303
Query: 341 FYSNVPVCNAILQ---------HQAGELF----------------------------RLF 363
F S A++ H A +F +LF
Sbjct: 304 FDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLF 363
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
+ M +T+P+++T V+ AC ++S + G +H YI+K G+ +FV N L++MY KC
Sbjct: 364 NKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKC 423
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
GSL +R++F M D V+W+S+I Y G GE+AL+ F M+ GV+ + VT + VL
Sbjct: 424 GSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVL 483
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
+AC+H GLV EG QL+ + + I T E +C++DL R+G++ +A + + M
Sbjct: 484 SACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPS 543
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
+W SL++SCK HG +D+ + + +++ +P N+A+ LL I+A G+W ++ ++ +
Sbjct: 544 ARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRET 603
Query: 604 MKERGVRKVPGQSWIE 619
MK + +RK G S IE
Sbjct: 604 MKLQRLRKCYGFSRIE 619
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 208/460 (45%), Gaps = 58/460 (12%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVA---FDFLQNNTNFRIRPSTYA 84
++ A +V D+ R W+ + ++ + L EAL F FL F +P A
Sbjct: 117 IESARQVFDTMPHRDTITWN-SMINAYLQNGLLVEALQMLKDFYFL----GFLPKPELLA 171
Query: 85 DLISACSSLRSL--QLGRKVHDHILSS---KCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
++S C L ++GR++H ++ + Q L ++ Y +CG AR VFD
Sbjct: 172 SMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFD 231
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EM +N VSWTA+I+GC+ N + A+ Y +M G+ P++ T +++ AC+ V
Sbjct: 232 EMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKY 291
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD-AWNVFSSIARKDITSWGSMIDGFS 258
G+++H + + S ALI +Y + + L A +F + +D+ W S+I ++
Sbjct: 292 GKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYA 351
Query: 259 KL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
+ D A +FN+M + E P+ +T+ +
Sbjct: 352 RRGESDKALKLFNKMRT-------------------------------EETEPNYVTLLA 380
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTKP 373
++ ACT+ S G IH YI+K G ++ VCNA++ A G L + L ++
Sbjct: 381 VISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSR- 439
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKT-GLALDVFVMNGLMDMYVKCGSLGSAREL 432
D +T+N ++ A E Q H Y MK G+ LD ++ G + ++L
Sbjct: 440 DSVTWNSMISAYGLHGYGEQALQ-HFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQL 498
Query: 433 FNFM----EDPDVVS-WSSLIVGYAQFGCGEEALKLFRRM 467
F + E P + ++ LI + + G E+AL++ R M
Sbjct: 499 FEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTM 538
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 174/564 (30%), Positives = 309/564 (54%), Gaps = 34/564 (6%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ L+ C RS+ + + H+L S P + + +++ KCG ++ AR VFD M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+R++V+W ++IA ++ + A+E+Y M+ + ++PD++T S+ +A S L ++
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 203 LHA-HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-- 259
H VI S++ +AL+ MY KF + +A V + KD+ ++I G+S+
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 260 -----LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+ +++ E PN ++ +++ SC N ++G+ +LI GL V+
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLI---SCGN-------LKDIGNGKLI-HGLMVK 295
Query: 315 S----LLCACTSPLSLY-------QGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRL- 362
S L + TS L++Y +++ I S + + ++Q+ E+ +
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE 355
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M+ KP+ T + + C+ +A E G Q+H + K G D + +GL+D+Y K
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGK 415
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CG AR +F+ + + DV+S +++I YAQ G G EAL LF RM + G++PN VT++ V
Sbjct: 416 CGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSV 475
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L AC++ LVEEG +L+ + + I+ T + +C+VDLL RAGR+ EAE ++ +
Sbjct: 476 LLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INP 533
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D+V+W++LL++CK H V++ +R IL+I+P + L+L+ N+YAS+GKW V +
Sbjct: 534 DLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKS 593
Query: 603 SMKERGVRKVPGQSWIEIQTKIHA 626
MK+ ++K P SW+EI + H
Sbjct: 594 KMKDMKLKKNPAMSWVEINKETHT 617
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 178/386 (46%), Gaps = 45/386 (11%)
Query: 61 NEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
EA+ AF Q+ +++P+ TYA ++ +C +L+ + G+ +H ++ S +
Sbjct: 249 TEAVKAF---QSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
+L MY +C ++D+ VF + N VSWT++I+G QNG+E A+ + +M++ +
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P+ FT S +R CS L GRQ+H V K +G FDR
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTK--YG---------------FDR------- 401
Query: 239 FSSIARKDITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
D + +ID + K D AR VF+ + ++ S NT+I A EA+
Sbjct: 402 -------DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREAL 454
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG--FYSNVPVCNAILQ 353
LF M + L P+ +TV S+L AC + + +G ++ K ++ C L
Sbjct: 455 DLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLL 514
Query: 354 HQAGELFRLFSLMLASQT-KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV 412
+AG L + ML ++ PD + + ++ AC +EM ++ I++ D
Sbjct: 515 GRAGRLEE--AEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPG-DEGT 571
Query: 413 MNGLMDMYVKCGSLGSARELFNFMED 438
+ + ++Y G E+ + M+D
Sbjct: 572 LILMSNLYASTGKWNRVIEMKSKMKD 597
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 19/288 (6%)
Query: 34 VVDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY--A 84
+VD LR F I W L S L + AL+ F + ++ I+P+++ +
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWT-SLISGLVQNGREEMALIEFRKMMRDS---IKPNSFTLS 372
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ CS+L + GR++H + D + ++++YGKCG + AR+VFD + +
Sbjct: 373 SALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEV 432
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V+S MI +QNG A++L+ +M+ GL P+ T S++ AC+ V G +L
Sbjct: 433 DVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELF 492
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG---FSKLD 261
K + ++ + + R+ +A + + + D+ W +++ K++
Sbjct: 493 DSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVE 552
Query: 262 FARTVFNEMESPNLASWNTIIAG---VASCSNANEAMSLFSEMGDREL 306
A + ++ T+I AS N + + S+M D +L
Sbjct: 553 MAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKL 600
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 315/638 (49%), Gaps = 47/638 (7%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L +A + D R W+ + S + Y EAL F+ ++ + +++ +
Sbjct: 53 LVEARHMFDEMPLRTVSSWN-TMISGYSQWGKYTEALTLVSFMHSSC-VKFNEVSFSACL 110
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE------- 140
SAC+ SL LG+++H + S Q + + +L+ Y +C + +A MVF+E
Sbjct: 111 SACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHV 170
Query: 141 ------------------------MPQRNVVSWTAMIAGCS--QNGQENAAIELYVQMLQ 174
MP R+VV+WT +I+G + ++G E A ++L+ M +
Sbjct: 171 LWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERA-LDLFGCMRR 229
Query: 175 SG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
S ++P++FT ++R C+ L + +G+ +H IK +AL Y D +
Sbjct: 230 SSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVD 289
Query: 234 DAWNVFSSIARKDITSWG-SMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
DA V+ S+ + ++ S+I G ++ A +F + L S N +I G A
Sbjct: 290 DAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSG 349
Query: 290 NANEAMSLFSEMGDREL--IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
++ LF +M + L + +TV S + L+ + + N +
Sbjct: 350 QFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVT----WNSMM 405
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
I + E +L+ M + TF+ + ACA + S + G LH ++ KT
Sbjct: 406 SGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQ 465
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+V+V L+D Y KCG L A+ F + P+V +W++LI GYA GCG EA+ FR M
Sbjct: 466 ENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSM 525
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGR 527
GV PN T V VL+ACSH GLV+EGL+ + MQ Y I PT E +CVVDLL R+GR
Sbjct: 526 LDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGR 585
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
V EAE+FI QM D V+W +LL + NV++G+RAA + +DP + +ALV L N+
Sbjct: 586 VKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNM 645
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
YA G+W + ++ ++ +RK G SWIE+ +H
Sbjct: 646 YARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVH 683
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 223/490 (45%), Gaps = 44/490 (8%)
Query: 108 SSKCQPDAVLHNHI-LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+S+ P V+ +I + + K G L +AR +FDEMP R V SW MI+G SQ G+ A+
Sbjct: 29 ASQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEAL 88
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
L M S + ++ +F + + AC+ + LG+Q+H+ + KS + +AL+ Y
Sbjct: 89 TLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYY 148
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEMESPNLASWNTIIA 283
+ I +A VF + ++ W M+ G+ + D A +F +M ++ +W T+I+
Sbjct: 149 VQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLIS 208
Query: 284 GVASCSNANE-AMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF 341
G A + E A+ LF M E++P+ T+ +L C LY G +H IK GF
Sbjct: 209 GYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGF 268
Query: 342 YSNVPVCNAI-----LQHQAGELFRLFSLM-------LASQTKPDHITFNDVMGACAAMA 389
+ V +A+ + + R++ M +A ++ V A
Sbjct: 269 DFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFY 328
Query: 390 SLEMGTQLHCYIMKTGLALD-----------------VFVMNGLMDMYVKCGSLGSAREL 432
L T + +M G A+ + +N ++ +Y K G L A +L
Sbjct: 329 GLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKL 388
Query: 433 FNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
F+ + + + V+W+S++ GY G EALKL+ MR V + T + AC+++
Sbjct: 389 FDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCS 448
Query: 492 VEEGLQLYRIMQNEYGIIPTRER---RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
++G +++ P +E + +VD ++ G + +A+ + F ++ W
Sbjct: 449 FQQG----QLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWT 503
Query: 549 SLLASCKTHG 558
+L+ HG
Sbjct: 504 ALINGYAYHG 513
>gi|413918046|gb|AFW57978.1| hypothetical protein ZEAMMB73_147394 [Zea mays]
Length = 729
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 300/585 (51%), Gaps = 45/585 (7%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T+A ++ AC+ R G + H ++ S C+ AV +L+ Y C L R +F+
Sbjct: 108 ATFASVVGACARGRMFCAGTQAHGQVIKSGCEGFAVTGASLLDFYSSCFDLRATRTLFES 167
Query: 141 M-PQ-------------------------------RNVVSWTAMIAGCSQNGQE--NAAI 166
+ P+ R+V +WTA+I+G ++ + A+
Sbjct: 168 LRPKNELLWSPMVVALVRFGLLAEALDLLQNTPAPRDVFAWTAVISGYAKGTDQCCGKAL 227
Query: 167 ELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
+L+V++L G+MP+++T+ S++RAC L + GR +H +I+ S + +AL+ +
Sbjct: 228 QLFVKLLADDGVMPNEYTYDSVLRACVRLGALDFGRSVHGCLIRCGFRSEQLITSALVDL 287
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTII 282
Y D + DA V++ + R + ++I G + + A+ VF++M + S+N +I
Sbjct: 288 YCTSDALDDALLVYNDLDRPSSITSNTLIAGLISIGRTEHAKMVFSQMPEQDSGSYNLMI 347
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYII--KKG 340
A +F +M R ++ ++ S++ L +G+++ I +
Sbjct: 348 KAYAMEGELEHCRRIFEKMPRRNMV----SLNSMMSVLLQNGRLEEGLKLFKQIKDERDT 403
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
N + I + E +LF +M + TF+ ++ ACA + +LE G +HC+
Sbjct: 404 ITWNSMISGYIQNDKPSEALKLFVVMCRLSIECSPSTFSALLHACATIGTLEQGRMVHCH 463
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+ KT V L DMY KCG + A+ F ++ P+V SW+SLI G AQ G EA
Sbjct: 464 LCKTSFDSSDHVGTALADMYFKCGCVIDAQSAFTYVTSPNVASWTSLINGLAQNGHWLEA 523
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L F RM V+PN +T +G+L A + GLV +G++++ M+N +G++PT + +CVVD
Sbjct: 524 LSQFGRMLKHHVKPNEITFLGLLMASARAGLVNKGMKIFYSMEN-FGLVPTVQHCTCVVD 582
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R GR EAE FI +M D V+W +LL +C ++++G++ A+ + + + +A
Sbjct: 583 LLGRTGRTREAEKFIYEMPLPADGVIWGALLTACWYSMDLEMGEKVAQRLFFMGTKHRSA 642
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
V + NIYA GKWE+V ++ ++ K PG SWIEI+ +H
Sbjct: 643 YVAMSNIYAKLGKWEDVVKVRTWLRSLNAEKEPGCSWIEIKGIVH 687
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 180/401 (44%), Gaps = 36/401 (8%)
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R +FD R+ +SW A+++G +++G A++ +M SG+ + TF S++ AC+
Sbjct: 61 RYLFDGTRHRDAISWNAVVSGHARHGNVPDALDTAARMHSSGVPFTEATFASVVGACARG 120
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
G Q H VIKS ++ +L+ Y+ + +F S+ K+ W M+
Sbjct: 121 RMFCAGTQAHGQVIKSGCEGFAVTGASLLDFYSSCFDLRATRTLFESLRPKNELLWSPMV 180
Query: 255 DG---FSKLDFARTVFNEMESP-NLASWNTIIAGVASCSNA--NEAMSLFSE-MGDRELI 307
F L A + +P ++ +W +I+G A ++ +A+ LF + + D ++
Sbjct: 181 VALVRFGLLAEALDLLQNTPAPRDVFAWTAVISGYAKGTDQCCGKALQLFVKLLADDGVM 240
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-HQAGELFRLFSLM 366
P+ T S+L AC +L G +H +I+ GF S + +A++ + + L+
Sbjct: 241 PNEYTYDSVLRACVRLGALDFGRSVHGCLIRCGFRSEQLITSALVDLYCTSDALDDALLV 300
Query: 367 LASQTKPDHITFNDVMGACAAMASLEM--------------------------GTQLHC- 399
+P IT N ++ ++ E G HC
Sbjct: 301 YNDLDRPSSITSNTLIAGLISIGRTEHAKMVFSQMPEQDSGSYNLMIKAYAMEGELEHCR 360
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGE 458
I + ++ +N +M + ++ G L +LF ++D D ++W+S+I GY Q
Sbjct: 361 RIFEKMPRRNMVSLNSMMSVLLQNGRLEEGLKLFKQIKDERDTITWNSMISGYIQNDKPS 420
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
EALKLF M + + T +L AC+ +G +E+G ++
Sbjct: 421 EALKLFVVMCRLSIECSPSTFSALLHACATIGTLEQGRMVH 461
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
G R LF+ D +SW++++ G+A+ G +AL RM SSGV T V+ AC
Sbjct: 58 GRTRYLFDGTRHRDAISWNAVVSGHARHGNVPDALDTAARMHSSGVPFTEATFASVVGAC 117
Query: 487 SHVGLVEEGLQLY 499
+ + G Q +
Sbjct: 118 ARGRMFCAGTQAH 130
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 279/545 (51%), Gaps = 64/545 (11%)
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP TY L C+ LR LG + H+L + + + +HN ++M+ CG +E+AR
Sbjct: 153 RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARK 212
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFDE P R++VSW +I G + G+ AI +Y M G+ PD T ++ +CS L
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD 272
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G++ + +V ++ + NAL+ M++K I +A
Sbjct: 273 LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA--------------------- 311
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
R +F+ +E + SW T+I+G A C + + LF +M +++++
Sbjct: 312 -------RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV--------- 355
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHI 376
L+ M S K+G + LF M S TKPD I
Sbjct: 356 ---------LWNAMIGGSVQAKRG----------------QDALALFQEMQTSNTKPDEI 390
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T + AC+ + +L++G +H YI K L+L+V + L+DMY KCG++ A +F+ +
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+ + ++++++I G A G A+ F M +G+ P+ +T +G+L+AC H G+++ G
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ M++ + + P + S +VDLL RAG + EA+ + M + D VW +LL C+
Sbjct: 511 DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM 570
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
HGNV++G++AA+ +L++DP++S VLL +Y + WE+ R M ERGV K+PG S
Sbjct: 571 HGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Query: 617 WIEIQ 621
IE+
Sbjct: 631 SIEVN 635
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 166/370 (44%), Gaps = 72/370 (19%)
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM---GDRELIPDGLTVRSL 316
LD++ + +E+PN+ SWN I G + N E+ L+ +M G E PD T L
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 317 LCACTSPLSLYQGMQIHSYIIK--------------------------KGFYSNVPVCNA 350
C G I +++K + + PV +
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 351 ILQH----------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ + +A + ++ LM + KPD +T ++ +C+ + L G + + Y
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC---- 456
+ + GL + + ++N LMDM+ KCG + AR +F+ +E +VSW+++I GYA+ G
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 457 ---------------------------GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
G++AL LF+ M++S +P+ +T++ L+ACS +
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
G ++ G+ ++R ++ +Y + + +VD+ A+ G + EA + + + + + +
Sbjct: 403 GALDVGIWIHRYIE-KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL-TYTA 460
Query: 550 LLASCKTHGN 559
++ HG+
Sbjct: 461 IIGGLALHGD 470
>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
Length = 701
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 307/644 (47%), Gaps = 112/644 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY+ +SAC++ L +GR VH +L + D + ++NMY KCG + A F M
Sbjct: 63 TYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRM 122
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P RNVVSWT IAG Q+ + +A+ L +M+++G+ +++T SI+ AC+ + V
Sbjct: 123 PVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREAS 182
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS---SIARKDITSWGSMIDGFS 258
Q+H V+K+E + + ALI+ YT F I + VF +++ + I W + I G S
Sbjct: 183 QIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVS 240
Query: 259 KLDFARTV------FNEMESPNLASWNTIIAGVAS------------------------- 287
R+V F++ PN + ++ + V S
Sbjct: 241 NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSA 300
Query: 288 -------CSNANEAMSLFSEMGDRELI-------------------------------PD 309
C N ++ +F EM +R+ + PD
Sbjct: 301 LSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPD 360
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSY---------IIKKGFYSNVPVCNAILQHQ----- 355
+++ ++L AC P L +G ++H + I F S C + +
Sbjct: 361 HVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFINDCFISMYSKCQGVQTARRIFDA 420
Query: 356 ---------------------AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
E LF LM+A+ + D + ++ CA +A
Sbjct: 421 TPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYC 480
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
LH Y +K G+ D V + L+ +Y + G++ +R++F+ + PD+V+W+++I GYAQ
Sbjct: 481 KPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 540
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G + AL +F M GVRP+ V LV VL+ACS GLVE+G + M+ YG+ P +
Sbjct: 541 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQH 600
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
C+VDLL R+GR+ EA+ F++ M D++VW +LLA+C+ H + +G R EN ++
Sbjct: 601 YCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLG-RFVENKIREG 659
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+S + L NI A+SG WEEVAR+ +MK GV K PG S +
Sbjct: 660 NYDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 701
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 208/450 (46%), Gaps = 22/450 (4%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++++ K G L DA VF + + V W A ++G +NG+ A+E++ M+ P+
Sbjct: 1 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
FT+ + AC+ + +GR +H V++ + + +L+ MY K + A F
Sbjct: 61 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120
Query: 241 SIARKDITSWGSMIDGFSKLD---FARTVFNEMESPNLA----SWNTIIAGVASCSNANE 293
+ +++ SW + I GF + D A + EM +A + +I+ A S E
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 180
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAIL 352
A + + E+ D + +L+ T+ + +++ + ++ G SN + +A +
Sbjct: 181 ASQIHGMVLKTEMYLDCVVKEALISTYTN----FGFIELSEKVFEEAGTVSNRSIWSAFI 236
Query: 353 ----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
H +L M +P+ + V +++ S+E G QLH +K G
Sbjct: 237 SGVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKEGFIH 293
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
+ V + L MY +C ++ + ++F M++ D VSW++++ G+A G EA FR M
Sbjct: 294 GILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMI 353
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G +P+HV+L +L+AC+ + +G +++ YG T C + + ++ V
Sbjct: 354 LDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYG--ETTFINDCFISMYSKCQGV 411
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
A + D V+W S+++ T+G
Sbjct: 412 QTARRIFDATPRKDQ-VMWSSMISGYATNG 440
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C + A + D+ R+ +W + S EA+ F L + RI
Sbjct: 405 YSKCQGVQTARRIFDATPRKDQVMWS-SMISGYATNGCGEEAISLFQ-LMVAASIRIDSY 462
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+ ++S C+ + + +H + + + D + + ++ +Y + G+++D+R VFDE+
Sbjct: 463 ICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEI 522
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
++V+WT +I G +Q+G A+ ++ M+Q G+ PD S++ ACS
Sbjct: 523 SVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACS 573
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 176/564 (31%), Positives = 280/564 (49%), Gaps = 62/564 (10%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
+ LV + + R TY+ L C++L +G ++ +L D L+N I
Sbjct: 136 KGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGI 195
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++M G A VFDE R++VSW ++I G + Q A+ +Y QM+ + PD+
Sbjct: 196 IHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDE 255
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T ++ AC+ L + LGR++H ++ +S + NAL+ MY K
Sbjct: 256 VTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKC------------ 303
Query: 242 IARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
L+ + +F+ M + SW T+I G A + A LF +M
Sbjct: 304 ----------------GDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDM 347
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFR 361
++ ++ +++ +C A L +A ELFR
Sbjct: 348 PEKNVV----AWNAMIGSCVQ---------------------------ANLSFEALELFR 376
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
M S KPD +T + AC+ + +L+ G H YI K L+LDV + L+DMY
Sbjct: 377 E---MQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYA 433
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG++ A ++FN M + ++W+++I G A +G +A+ F +M SG+ P+ +T +G
Sbjct: 434 KCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLG 493
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VLTAC H GLVEEG + + M++ + + P + SC+V+LL RAG + EAE+ I M +
Sbjct: 494 VLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPME 553
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D +VW +L +C H N+ +G+RAA +L +DP +S VLL N+Y +GKWEE +
Sbjct: 554 ADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIR 613
Query: 602 GSMKERGVRKVPGQSWIEIQTKIH 625
M ERGV K PG S IE+ I+
Sbjct: 614 KMMMERGVEKTPGSSSIEVNGIIN 637
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 183/634 (28%), Positives = 309/634 (48%), Gaps = 65/634 (10%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L A + D F + D + + SS E L F + + T T +
Sbjct: 196 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM-HMTGPAPNSYTIVSAL 254
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+AC +LG+++H +L S + + N ++ MY +CG + A + +M +V
Sbjct: 255 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 314
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
V+W ++I G QN A+E + M+ +G D+ + SII A L + G +LHA+
Sbjct: 315 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY 374
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
VIK S+L N LI MY+K N+ + R
Sbjct: 375 VIKHGWDSNLQVGNTLIDMYSK-------CNLTCYMGR---------------------A 406
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F M +L SW T+IAG A EA+ LF ++ + + D + + S+L A + S+
Sbjct: 407 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 466
Query: 327 YQGMQIHSYIIKKGFYSNV-----------------------------------PVCNAI 351
+IH +I++KG V + ++
Sbjct: 467 LIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 526
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
L E LF M+ + D + ++ A A++++L G ++HCY+++ G L+
Sbjct: 527 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 586
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
+ ++DMY CG L SA+ +F+ +E ++ ++S+I Y GCG+ A++LF +MR
Sbjct: 587 IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 646
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
V P+H++ + +L ACSH GL++EG +IM++EY + P E C+VD+L RA V EA
Sbjct: 647 VSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEA 706
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
+F+ M + VW +LLA+C++H ++G+ AA+ +L+++P N LVL+ N++A
Sbjct: 707 FEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQ 766
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
G+W +V ++ MK G+ K PG SWIE+ K+H
Sbjct: 767 GRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 800
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 142/551 (25%), Positives = 261/551 (47%), Gaps = 74/551 (13%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S++ L+ AC+ LR ++ G ++H ++ + N +++MY K L AR +FD
Sbjct: 146 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 205
Query: 141 MPQR-NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
++ + V W ++++ S +G+ +EL+ +M +G P+ +T S + AC G L
Sbjct: 206 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 265
Query: 200 GRQLHAHVIKSE-HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G+++HA V+KS H S L NALIAMYT+ ++ A + + D+ +W S+I G+
Sbjct: 266 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY- 324
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
V N M EA+ FS+M D +++ S++
Sbjct: 325 -------VQNLM--------------------YKEALEFFSDMIAAGHKSDEVSMTSIIA 357
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------------------- 357
A +L GM++H+Y+IK G+ SN+ V N ++ +
Sbjct: 358 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 417
Query: 358 ---------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
E LF + + + D + ++ A + + S+ + ++HC+I+
Sbjct: 418 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHIL 477
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ GL LD + N L+D+Y KC ++G A +F ++ DVVSW+S+I A G EA++
Sbjct: 478 RKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVE 536
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LFRRM +G+ + V L+ +L+A + + + +G +++ + + G VVD+
Sbjct: 537 LFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK-GFCLEGSIAVAVVDMY 595
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA-- 580
A G + A+ +++ ++ + S++ + HG GK A E K+ N +
Sbjct: 596 ACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG---CGKAAVELFDKMRHENVSPDH 651
Query: 581 LVLLCNIYASS 591
+ L +YA S
Sbjct: 652 ISFLALLYACS 662
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 232/518 (44%), Gaps = 99/518 (19%)
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++L + GK ++ + VFDEMP R +W MI NG+ +A+ LY M G+
Sbjct: 85 YVLELCGKRRAVSQEK-VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 143
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+F ++++AC+ L + G +LH+ ++K + S NAL++MY K D
Sbjct: 144 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND--------- 194
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
D+++ + DGF E + WN+I++ ++ + E + LF
Sbjct: 195 ------DLSAARRLFDGFQ------------EKGDAVLWNSILSSYSTSGKSLETLELFR 236
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN-VPVCNAIL------ 352
EM P+ T+ S L AC G +IH+ ++K +S+ + VCNA++
Sbjct: 237 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 296
Query: 353 --QHQAGELFR----------------------------LFSLMLASQTKPDHITFNDVM 382
QA + R FS M+A+ K D ++ ++
Sbjct: 297 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 356
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
A +++L G +LH Y++K G ++ V N L+DMY KC F M D D++
Sbjct: 357 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 416
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS-----------HVGL 491
SW+++I GYAQ C EAL+LFR + + + + L +L A S H +
Sbjct: 417 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHI 476
Query: 492 VEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
+ +GL L ++QNE + + R + A RV E+ D+V W S++
Sbjct: 477 LRKGL-LDTVIQNELVDVYGKCRN------MGYATRVFESIK-------GKDVVSWTSMI 522
Query: 552 ASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLC 585
+S +GN V++ +R E L D ++ LLC
Sbjct: 523 SSSALNGNESEAVELFRRMVETGLSAD-----SVALLC 555
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 256/500 (51%), Gaps = 68/500 (13%)
Query: 130 SLEDARMVFDEMPQRNVVSWTAMI-AGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSI 187
+L AR++FD +P N +TAMI A + +A+ L+ ML+S P+ F F
Sbjct: 54 NLTYARLIFDHIPSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHA 113
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
++ C C LHA ++KS + + Q AL+ Y+K
Sbjct: 114 LKTCPESCAA---ESLHAQIVKSGFHEYPVVQTALVDSYSKVS----------------- 153
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
L A+ VF+EM ++ S+ +++G A + A+ +F EM DR+ +
Sbjct: 154 ----------GGLGNAKKVFDEMSDRSVVSFTAMVSGFARVGDVESAVRVFGEMLDRD-V 202
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLML 367
P + +L+ CT + QG++ LF M+
Sbjct: 203 P---SWNALIAGCTQNGAFTQGIE------------------------------LFRRMV 229
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+P+ +T + AC M L++G +H Y+ K GLA D FV+N L+DMY KCGSLG
Sbjct: 230 FECNRPNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLG 289
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM--RSSGVRPNHVTLVGVLTA 485
AR++F + + SW+S+I +A G + A+ +F +M GVRP+ VT VG+L A
Sbjct: 290 KARKVFEMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNA 349
Query: 486 CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
C+H GLVE+G + +M EYGI P E C++DLL RAGR EA D + M+ + D V
Sbjct: 350 CTHGGLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEV 409
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
VW SLL CK HG D+ + AA+ +++IDP N ++L N+Y GKW+EV + ++K
Sbjct: 410 VWGSLLNGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLK 469
Query: 606 ERGVRKVPGQSWIEIQTKIH 625
++ KVPG SWIE+ ++H
Sbjct: 470 QQKSYKVPGCSWIEVDDQVH 489
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 35 VDSFLRRFDDIWDFDLFS-----SLCKQN-LYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
V+S +R F ++ D D+ S + C QN + + + F + N R T +S
Sbjct: 187 VESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECN-RPNGVTVVCALS 245
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
AC + LQLGR +H ++ + D+ + N +++MYGKCGSL AR VF+ P++ + S
Sbjct: 246 ACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTS 305
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQ--SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
W +MI + +GQ ++AI ++ QM++ G+ PD+ TF ++ AC+ V G
Sbjct: 306 WNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEM 365
Query: 207 VIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG 256
+++ E+G + LI + + R +A +V ++ D WGS+++G
Sbjct: 366 MVQ-EYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNG 417
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 37/268 (13%)
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
+ + G +E A VF EM R+V SW A+IAGC+QNG IEL+ +M+ P+ T
Sbjct: 181 FARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTV 240
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
+ AC + + LGR +H +V K+ NAL+ MY K + A VF
Sbjct: 241 VCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPE 300
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--G 302
K +TSW SMI+ F A ++ A+++F +M G
Sbjct: 301 KGLTSWNSMINCF----------------------------ALHGQSDSAIAIFEQMVEG 332
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAG 357
+ PD +T LL ACT + +G ++++ Y P C L +AG
Sbjct: 333 GGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQE--YGIEPQIEHYGCLIDLLGRAG 390
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGAC 385
++ +PD + + ++ C
Sbjct: 391 RFDEAMDVVKGMSMEPDEVVWGSLLNGC 418
>gi|449458803|ref|XP_004147136.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 638
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 280/528 (53%), Gaps = 39/528 (7%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G +VH H+ D N++L MY +CG + + VF+EMPQRNVVSW+ + + S+
Sbjct: 144 GAQVHGHMCKLGFDYDTFSMNNLLKMYCRCGFMCEGFKVFEEMPQRNVVSWSLITSSLSK 203
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
NG+ +E +++M++ GLMP +F FGS+++AC+ + G G +H K ++
Sbjct: 204 NGEFELCLESFLEMMRDGLMPTEFAFGSVMKACADVEAYGFGSGVHCLSWKIGMEQNVFV 263
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
+ ++MY + DITS A VF ME ++ W
Sbjct: 264 GGSTLSMYARLG---------------DITS-------------AELVFEWMEKVDVGCW 295
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
N +I G +C + EA+S S + + D T+ S + AC+ L G ++H +I++
Sbjct: 296 NAMIGGYTNCGLSLEALSAVSLLNSEGIKMDKFTIVSAIKACSLIQDLDSGKELHGFILR 355
Query: 339 KGFYSNVPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+G S + NA++ + + ++F+ M QT+ D I++N V G + +
Sbjct: 356 RGLISTAAM-NALMDMYLISDRKNSVLKIFNSM---QTR-DIISWNTVFGGSSNEKEIVD 410
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF-NFMEDPDVVSWSSLIVGYA 452
K G V V + ++D Y KCG +GSA+ F + DV+ ++S+++ YA
Sbjct: 411 LFGKFVIEEKMGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYA 470
Query: 453 QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTR 512
G EA++ F +MR + V+P+ + V V++AC H+GLVE+G L++ M+++Y + P+R
Sbjct: 471 HHGLAWEAIQTFEKMRIAKVQPSQASFVSVISACGHMGLVEQGRSLFQTMKSDYNMTPSR 530
Query: 513 ERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK 572
+ C+VD+L+R G +++A I M F + +SLL+ C+ +GN ++G+ AE +L
Sbjct: 531 DNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAILRSLLSGCRIYGNRELGQWTAEKLLS 590
Query: 573 IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+ P N A VLL +Y+ WE+ A + M +RGV K PG S +EI
Sbjct: 591 LAPQNLATHVLLSKVYSEGNSWEDAANIRKEMTDRGVLKDPGYSRVEI 638
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/579 (29%), Positives = 294/579 (50%), Gaps = 63/579 (10%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T ++AC +LG+++H +L S + + N ++ MY +CG + +A + M
Sbjct: 266 TIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLM 325
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+VV+W ++I G QN A++ + M+ +G PD+ + S+I A L + G
Sbjct: 326 NNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGM 385
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+LHA+VIK S+L+ N LI MY+K N+ + R
Sbjct: 386 ELHAYVIKHGWDSNLLVGNTLIDMYSK-------CNLTCYMGR----------------- 421
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
F M +L SW TIIAG A EA+ LF ++ + + D + + S+L AC+
Sbjct: 422 ----AFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACS 477
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVP----------------------------------- 346
S+ +IH +I++KG V
Sbjct: 478 VLKSMLIVKEIHCHILRKGLIDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSM 537
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ ++ L E LF M + D + ++ A A++++L+ G ++H Y+++ G
Sbjct: 538 ISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGF 597
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
L+ + ++DMY CG L SA+ +F+ +E ++ ++S+I Y GCG+ +++LF +
Sbjct: 598 CLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNK 657
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
MR V P+H++ + +L ACSH GL++EG + +IM+ EY + P E C+VD+L RA
Sbjct: 658 MRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRAN 717
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
V EA +F+ M + VW +LLA+C++H ++G+ AA+ +L+++P N LVL+ N
Sbjct: 718 CVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSN 777
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++A G+W +V ++ MK G+ K PG SWIE+ K+H
Sbjct: 778 VFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 816
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/610 (24%), Positives = 288/610 (47%), Gaps = 80/610 (13%)
Query: 42 FDDIWDFDLFS--SLCKQNLYNEALVAFDFLQNNTNFRIRP---STYADLISACSSLRSL 96
FD++ D F+ +L + N + F+ N P ++ L+ AC LR +
Sbjct: 119 FDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDI 178
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR-NVVSWTAMIAG 155
+ G ++H ++ + N +++MY K L A+ +FD ++ + V W ++++
Sbjct: 179 RSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSS 238
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH 215
S +G+ ++L+ +M +G + +T S + AC G LG+++HA V+KS H
Sbjct: 239 YSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFE 298
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNL 275
+ NALIAMY + ++L+A + + D+ +W S+I G+ V N M
Sbjct: 299 VYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGY--------VQNLM----- 345
Query: 276 ASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSY 335
EA+ F +M PD +++ S++ A +L GM++H+Y
Sbjct: 346 ---------------YKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAY 390
Query: 336 IIKKGFYSNVPVCNAILQ------------------HQ----------AG--------EL 359
+IK G+ SN+ V N ++ H+ AG E
Sbjct: 391 VIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEA 450
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
+LF + + + D + ++ AC+ + S+ + ++HC+I++ GL +D + N L+D+
Sbjct: 451 LQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDV 509
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTL 479
Y KC ++G A +F ++ DVVSW+S+I A G EA++LFRRM +G+ + V L
Sbjct: 510 YGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVAL 569
Query: 480 VGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMA 539
+ +L+A + + +++G +++ + + G VVD+ A G + A+ +++
Sbjct: 570 LCILSAAASLSALKKGREIHGYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 628
Query: 540 FDDDIVVWKSLLASCKTHGNVDVGKRAAE--NILKIDPTNSAALVLLCNIYASS--GKWE 595
++ + S++ + HG GK + E N ++ + + + L +YA S G +
Sbjct: 629 -RKGLLQYTSMINAYGMHG---CGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLD 684
Query: 596 EVARLMGSMK 605
E R + M+
Sbjct: 685 EGRRFLKIME 694
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 227/519 (43%), Gaps = 98/519 (18%)
Query: 118 HNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL 177
+ ++L + GK +L + VFDEM R +W A+I NG+ +A+ +Y M G+
Sbjct: 100 YAYLLELCGKSRALSQEK-VFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGV 158
Query: 178 MPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWN 237
D ++F +++AC L + G +LH ++K S NAL++MY K D + A
Sbjct: 159 PLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKR 218
Query: 238 VFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSL 297
+F + E + WN+I++ ++ + E + L
Sbjct: 219 LFDA---------------------------SQEKGDAVLWNSILSSYSTSGKSLETLQL 251
Query: 298 FSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--- 354
F EM + T+ S L AC G +IH+ ++K V VCNA++
Sbjct: 252 FREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYAR 311
Query: 355 -----QAGELFRL----------------------------FSLMLASQTKPDHITFNDV 381
+AG + RL F M+A+ KPD ++ V
Sbjct: 312 CGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSV 371
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ A +++L G +LH Y++K G ++ V N L+DMY KC F M + D+
Sbjct: 372 IAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDL 431
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS-----------HVG 490
+SW+++I GYA C EAL+LFR + + + + L +L ACS H
Sbjct: 432 ISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCH 491
Query: 491 LVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSL 550
++ +GL + ++QNE + + R + A RV E+ D+V W S+
Sbjct: 492 ILRKGL-IDTVIQNELVDVYGKCRN------MGYASRVFESIK-------GKDVVSWTSM 537
Query: 551 LASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLC 585
++S +GN V++ +R AE L D ++ LLC
Sbjct: 538 ISSSALNGNENEAVELFRRMAETGLLAD-----SVALLC 571
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 183/622 (29%), Positives = 298/622 (47%), Gaps = 76/622 (12%)
Query: 47 DFDLFSSLCKQNLYNEA----LVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
D LF+ L + NE+ L F L+ +T+ + STYA ISA S R + GR +
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H + C + +L ++I+ MY K +EDAR VFD MP+++ + W MI+G +N
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 163 NAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNA 221
+I+++ ++ +S D T I+ A + L + LG Q+H+ K+ SH
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 222 LIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTI 281
I++Y+K K+ +F E P++ ++N +
Sbjct: 262 FISLYSKC----------------------------GKIKMGSALFREFRKPDIVAYNAM 293
Query: 282 IAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS--LYQGMQIHSYIIKK 339
I G S ++SLF +EL+ G +RS P+S L IH Y +K
Sbjct: 294 IHGYTSNGETELSLSLF-----KELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 340 GFYSNVPVCNAILQ--------HQAGELF----------------------------RLF 363
F S+ V A+ A +LF LF
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
M S+ P+ +T ++ ACA + +L +G +H + T ++V L+ MY KC
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
GS+ AR LF+ M + V+W+++I GY G G+EAL +F M +SG+ P VT + VL
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
ACSH GLV+EG +++ M + YG P+ + +C+VD+L RAG + A FI M+ +
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGS 603
VW++LL +C+ H + ++ + +E + ++DP N VLL NI+++ + + A + +
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 604 MKERGVRKVPGQSWIEIQTKIH 625
K+R + K PG + IEI H
Sbjct: 649 AKKRKLAKAPGYTLIEIGETPH 670
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
++T I+ N + S+ Q H I+ G D+ ++ L G++
Sbjct: 10 TAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIY 69
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNHVTLVGVLTAC 486
AR++F ++ PDV ++ L+ G++ +L +F +R S+ ++PN T ++A
Sbjct: 70 YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA 129
Query: 487 S-----HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
S G V G + +E + S +V + + RV +A ++M +
Sbjct: 130 SGFRDDRAGRVIHGQAVVDGCDSELLL------GSNIVKMYFKFWRVEDARKVFDRMP-E 182
Query: 542 DDIVVWKSLLASCK 555
D ++W ++++ +
Sbjct: 183 KDTILWNTMISGYR 196
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 313/565 (55%), Gaps = 34/565 (6%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ L+ C RS+ + + +L S P + + +++ KCG + AR +FD M
Sbjct: 49 TFSQLLRQCIDERSISGIKNIQAQMLKSGF-PVELSGSKLVDASLKCGEIGYARQLFDGM 107
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R++V+W ++IA ++ + A+E+Y M+ + ++PD++T S+ +A S L +
Sbjct: 108 PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQ 167
Query: 202 QLHA-HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
+ H VI S++ +AL+ MY KF + +A V + KD+ ++I G+S+
Sbjct: 168 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 227
Query: 260 ------LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ +++ E PN ++ +++ SC N ++G+ +LI GL V
Sbjct: 228 GEDTEAVKAFQSMLVEKVQPNEYTYASVLI---SCGN-------LKDIGNGKLI-HGLMV 276
Query: 314 RS----LLCACTSPLSLYQGMQI--HSYIIKKGF-YSN----VPVCNAILQHQAGELFRL 362
+S L + TS L++Y + S ++ K Y N + + ++Q+ E +
Sbjct: 277 KSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALI 336
Query: 363 -FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
F M+ KP+ T + + C+ +A E G Q+H + K G D + +GL+++Y
Sbjct: 337 EFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYG 396
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
KCG AR +F+ + + DV+S +++I YAQ G G EAL+LF RM + G++PN VT++
Sbjct: 397 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLS 456
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD 541
VL AC++ GLVEEG +L+ + + I+ T + +C+VD+L RAGR+ EAE I ++ +
Sbjct: 457 VLLACNNSGLVEEGCELFDSFRKD-KIMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-N 514
Query: 542 DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
D+V+W++LL++CK H V++ +R IL+I P + L+LL N+YAS+GKW+ V +
Sbjct: 515 PDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMK 574
Query: 602 GSMKERGVRKVPGQSWIEIQTKIHA 626
MKE ++K P SW+EI + H
Sbjct: 575 SKMKEMKLKKNPAMSWVEIDKETHT 599
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/490 (33%), Positives = 257/490 (52%), Gaps = 70/490 (14%)
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M + G+ D T+ +I+ CS V G+++H H+ + + N L+ MY KF+
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
L+ A +F+EM N+ SW T+I+ ++ N
Sbjct: 106 ----------------------------LEEAEDLFDEMPERNVVSWTTMISAYSNKLN- 136
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
++A+ M + P+ T S+L AC +L Q+H IIK G S+V V +A+
Sbjct: 137 DKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSAL 193
Query: 352 L-----------------------------------QHQAG-ELFRLFSLMLASQTKPDH 375
+ Q+ G E LF M + D
Sbjct: 194 IDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQ 253
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
T V+ AC +A LE+G Q+H +++K D+ + N L+DMY KCGSL A F+
Sbjct: 254 ATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSR 311
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M + DV+SWS+++ G AQ G +AL+LF M+ SG RPN++T++GVL ACSH GLVE+G
Sbjct: 312 MVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKG 371
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+R M+ +G+ P RE C++DLL RAGR+ EA I++M + D V W++LL +C+
Sbjct: 372 WYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACR 431
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
H NVD+ AA+ I++++P ++ +LL NIYA++ +WE+VA + +M RG+RK PG
Sbjct: 432 VHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGC 491
Query: 616 SWIEIQTKIH 625
SWIE+ +IH
Sbjct: 492 SWIEVDKQIH 501
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 213/437 (48%), Gaps = 75/437 (17%)
Query: 51 FSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
F++ C Q + A+ A D ++ + F TY++LI CS+ ++Q G++VH+HI
Sbjct: 27 FANFCHQWDLHRAMRAMDAMERHGVF-ADAITYSELIKCCSARGAVQEGKRVHEHIFCKG 85
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
+P + N +LNMY K LE+A +FDEMP+RNVVSWT MI+ S N + A++ +
Sbjct: 86 YEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLI 144
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M + G+ P+ FT+ S++RAC GL + RQLH +IK+ S + ++ALI +Y+K+
Sbjct: 145 LMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWS 201
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ +A VF + +D+ W N+II G A S+
Sbjct: 202 DLDNALGVFDEMPTRDLVVW----------------------------NSIIGGFAQNSD 233
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
NEA++LF M + D T+ S+L ACT L G Q+H +++K F ++ + NA
Sbjct: 234 GNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNA 291
Query: 351 ILQ---------------------------------HQAG---ELFRLFSLMLASQTKPD 374
++ Q G + LF M S ++P+
Sbjct: 292 LIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPN 351
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG--LMDMYVKCGSLGSAREL 432
+IT V+ AC+ +E G + MK +D + L+D+ + G L A +L
Sbjct: 352 YITVLGVLFACSHAGLVEKG-WYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKL 410
Query: 433 FNFME-DPDVVSWSSLI 448
+ ME +PD V+W +L+
Sbjct: 411 IHEMECEPDSVTWRTLL 427
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 169/333 (50%), Gaps = 60/333 (18%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+RP+ TY+ ++ AC L +L R++H I+ + + D + + ++++Y K L++A
Sbjct: 151 VRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNAL 207
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VFDEMP R++V W ++I G +QN N A+ L+ +M ++G + DQ T S++RAC+GL
Sbjct: 208 GVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLA 267
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ LGRQ+H HV+K + LI NALI MY K + DA + FS + KD+ SW +M+
Sbjct: 268 LLELGRQVHVHVLKFDQD--LILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVA 325
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G ++ ++R +A+ LF M + P+ +TV
Sbjct: 326 GLAQNGYSR----------------------------QALELFESMKESGSRPNYITVLG 357
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV--------------CNAILQHQAGELFR 361
+L AC+ H+ +++KG+Y + C L +AG L
Sbjct: 358 VLFACS-----------HAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDE 406
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
L+ + +PD +T+ ++GAC ++++
Sbjct: 407 AVKLIHEMECEPDSVTWRTLLGACRVHRNVDLA 439
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 180/585 (30%), Positives = 290/585 (49%), Gaps = 67/585 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+++ L+ +S++ LG +VH ++ + + + + +++MY KC +EDA F E+
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ N VSW A+IAG Q A L M +++ + D TF ++ L
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL 222
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+HA V+K + NA+I+ Y + DA VF DG
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF---------------DGLGG- 266
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
S +L SWN++IAG + A LF +M + D T LL AC
Sbjct: 267 -----------SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------HQAGELF---------- 360
+ G +H +IKKG NA++ A LF
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 375
Query: 361 ------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
+ FS + +S+ K D F+ ++ +C+ +A+L++G Q+H
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEAL 461
K+G + FV++ L+ MY KCG + SAR+ F + V+W+++I+GYAQ G G+ +L
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSL 495
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF +M + V+ +HVT +LTACSH GL++EGL+L +M+ Y I P E + VDL
Sbjct: 496 DLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDL 555
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L RAG V++A++ I M + D +V K+ L C+ G +++ + A ++L+I+P +
Sbjct: 556 LGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTY 615
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
V L ++Y+ KWEE A + MKERGV+KVPG SWIEI+ ++ A
Sbjct: 616 VSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKA 660
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 46/273 (16%)
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F L +A +F+EM + SWNT+I+G SC +A LF+ M DG + L
Sbjct: 48 FGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRL 107
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLFSLMLASQT 371
L S G Q+H +IK G+ NV V ++++ A + F F + +
Sbjct: 108 LKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI----S 163
Query: 372 KPDHITFNDVMGA------------------CAAMASLEMGT------------------ 395
+P+ +++N ++ A +++ GT
Sbjct: 164 EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK 223
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM-EDPDVVSWSSLIVGYAQF 454
Q+H ++K GL ++ + N ++ Y CGS+ A+ +F+ + D++SW+S+I G+++
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
E A +LF +M+ V + T G+L+ACS
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 85/155 (54%), Gaps = 2/155 (1%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ + ++ L +A+ F +L++ + ++ ++ L+ +CS L +LQLG+++H S
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRS-SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS 437
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN-VVSWTAMIAGCSQNGQENAAIEL 168
+ + + ++ MY KCG +E AR F ++ ++ V+W AMI G +Q+G +++L
Sbjct: 438 GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDL 497
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ QM + D TF +I+ ACS + G +L
Sbjct: 498 FSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
HCY +K G D++V N ++D Y+K G LG A LF+ M D VSW+++I GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E+A LF M+ SG + + +L + V + G Q++ ++ G S
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGSS 141
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+VD+ A+ RV +A + +++ + + V W +L+A
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIA 175
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
LF+ M S + D +F+ ++ A++ ++G Q+H ++K G +V+V + L+DMY
Sbjct: 88 LFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYA 147
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNHVTLV 480
KC + A E F + +P+ VSW++LI G+ Q + A L M + V + T
Sbjct: 148 KCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFA 207
Query: 481 GVLTACS-----------HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
+LT H +++ GL Q+E I + ++ A G V
Sbjct: 208 PLLTLLDDPMFCNLLKQVHAKVLKLGL------QHEITIC------NAMISSYADCGSVS 255
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTH 557
+A+ + + D++ W S++A H
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKH 283
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 175/593 (29%), Positives = 290/593 (48%), Gaps = 69/593 (11%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSL 93
FD+I D L S+L L NEA+ + LQ I+P + AC+
Sbjct: 121 FDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG---IKPDMPVFLAAAKACAVS 177
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++VHD D + N +++ YGKC +E AR VFD++ R+VVSWT++
Sbjct: 178 GDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLS 237
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+ + G ++++ +M SG+ P+ T SI+ AC+ L + G+++H ++
Sbjct: 238 SCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMV 297
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+L +AL+++Y K + +A R VF+ M
Sbjct: 298 VNLFVCSALVSLYAKCLSVREA----------------------------RMVFDLMPHR 329
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ SWN ++ + SLF +M + D T +++ C + +++
Sbjct: 330 DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMF 389
Query: 334 SYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+ K GF KP+ IT + ++ AC+ +L M
Sbjct: 390 RKMQKMGF------------------------------KPNEITISSILPACSFSENLRM 419
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++HCY+ + D+ L+ MY KCG L +R +F+ M DVV+W+++I+ A
Sbjct: 420 GKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAM 479
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G G+EAL LF +M S V+PN VT GVL+ CSH LVEEG+Q++ M ++ + P
Sbjct: 480 HGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDAN 539
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
SCVVD+ +RAGR++EA FI M + W +LLA+C+ + NV++ K +A+ + +I
Sbjct: 540 HYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEI 599
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+P N V L NI ++ W E +++ MKERG+ K PG SW+++ K+H
Sbjct: 600 EPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHT 652
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+ + + G AR+LF+ + PD + S+LI G EA+K++ ++ G++P+
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 476 HVTLVGVLTACSHVG 490
+ AC+ G
Sbjct: 164 MPVFLAAAKACAVSG 178
>gi|449433223|ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
gi|449487596|ref|XP_004157705.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 675
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 297/574 (51%), Gaps = 44/574 (7%)
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++++ + +R L + D I + P D +N ++ +CG ++ A+ +FD MP
Sbjct: 76 NIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIGGLMQCGDVDGAKDIFDLMP 135
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
R+VVSW +MIAGC +NG AI+L+ M ++ G ++ C L G +
Sbjct: 136 FRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLIIGGLVN-CGKLDSAG---E 191
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SK 259
+ + + L+S +I+ + R+ +A +F+++ KD W +M+ G+ K
Sbjct: 192 YFGKMSRRD----LVSWTIMISGLCRAGRLDEARGLFNNMPTKDARVWNAMMVGYIENGK 247
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR----------ELIPD 309
++ A +F M N SWN ++ G ++A LF EM D+ I +
Sbjct: 248 IEMAEELFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFMEMPDKCQKTWNNIVLAYIRN 307
Query: 310 GLTVRSL----------LCACTSPLSLYQGMQ---IHSYIIKKGFYSNVPVCNAIL---- 352
GL +++ + + T+ + Y G+ + I + Y + V NA +
Sbjct: 308 GLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESMQYKDTTVWNATIFGLG 367
Query: 353 -QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
+ E +LF+ M+ D TF ++ C+ + +L++G Q H I+K G V
Sbjct: 368 ENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHALILKEGFNGFVA 427
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N +++MY +CG++ A F+ M D DV+SW+S+I G+A G GE+AL++F +MR +
Sbjct: 428 VSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICGFAHHGNGEDALEMFEKMRLAN 487
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+ PNH+T +GVL+ACSH GL+++G + M+NE + P E +C+VDL R G + EA
Sbjct: 488 IEPNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIEHYTCLVDLFGRFGLIDEA 547
Query: 532 EDFINQMAFDDDIV---VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
F+ +M ++ V VW +LL +C+ H N DVG A E +L+ +P N+ ++L +Y
Sbjct: 548 LSFLAEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKEPHNAGVYLILAEMY 607
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
+GK E ++ MK GV+K PG SWIE+
Sbjct: 608 LRNGKRENAEKIFARMKNNGVKKQPGCSWIEVNN 641
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 121/234 (51%), Gaps = 17/234 (7%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP----STYADL 86
A E+ +S + +W+ +F L + + E L F + R+ P +T+ +
Sbjct: 344 AVEIFESMQYKDTTVWNATIFG-LGENDKGEEGLKLFTRM-----IRLGPCLDKATFTSI 397
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
++ CS L +LQLGR+ H IL + N ++NMY +CG+++ A M F M R+V
Sbjct: 398 LTICSDLETLQLGRQTHALILKEGFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDV 457
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
+SW +MI G + +G A+E++ +M + + P+ TF ++ ACS + GR + +
Sbjct: 458 ISWNSMICGFAHHGNGEDALEMFEKMRLANIEPNHITFIGVLSACSHKGLIDKGR-YYFN 516
Query: 207 VIKSEHGSHLISQN--ALIAMYTKFDRILDAWNVFSSIARKDI----TSWGSMI 254
+K+E + ++ L+ ++ +F I +A + + + ++I + WG+++
Sbjct: 517 FMKNECSLRPLIEHYTCLVDLFGRFGLIDEALSFLAEMKAEEIEVPPSVWGALL 570
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 295/550 (53%), Gaps = 56/550 (10%)
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
L NH+ N L+ AR++FD++P N+ +T MIAG ++N + A++L+ +M
Sbjct: 19 LANHLKNQ-----RLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMS--- 70
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+ D ++ S+I+ C L C LG + + ++IS ++ Y KF R+ A
Sbjct: 71 -VRDVVSWNSMIKGC--LDCGNLG--MATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQ 125
Query: 237 NVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+F + KD+ +W +M+ G+ +++ +F EM ++ SW ++I G+ + E
Sbjct: 126 RLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEE 185
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG------------- 340
A+ +F +M + P T +L AC + + G+Q+H +++K G
Sbjct: 186 ALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLIT 245
Query: 341 FYSN------------------VPVCNAIL-------QHQAGELFRLFSLMLASQTKPDH 375
FY+N V A+L +HQ + R+F M P+
Sbjct: 246 FYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQ--DALRVFGDMTKMGALPNQ 303
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
TF+ + AC + +L+ G ++H +K GL DVFV N L+ MY +CG++ SA +F
Sbjct: 304 STFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRN 363
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+ + D+VSW+S+IVG AQ G G AL F +M GV PN +T G+L+ACS G++ +G
Sbjct: 364 INEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKG 423
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
+ + + + +C+VD+L R G++ EAE+ + M + ++W +LL++C+
Sbjct: 424 RCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACR 483
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
H N++V +RAA++IL ++P S+A VLL NIYAS+G+W +V+R+ MK+ G+ K PG
Sbjct: 484 VHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGS 543
Query: 616 SWIEIQTKIH 625
SW+ ++ K H
Sbjct: 544 SWVVLRGKKH 553
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 35/327 (10%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
ST+A ++SAC++ LG +VH H++ C + ++ Y C +E A +F+E
Sbjct: 203 STFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNE 262
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+NVV WTA++ N + A+ ++ M + G +P+Q TF ++AC GL + G
Sbjct: 263 TLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKG 322
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+++H IK + + N+L+ MYT+ + A VF +I KDI SW
Sbjct: 323 KEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSW---------- 372
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
N+II G A A+ F++M R + P+ +T LL AC
Sbjct: 373 ------------------NSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSAC 414
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNV-----PVCNAILQHQAGELFRLFSLMLASQTKPDH 375
+ L +G YI + + SNV C + + G+L L+ K +
Sbjct: 415 SRSGMLLKGRCFFEYISR--YKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANS 472
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIM 402
+ + ++ AC ++LE+ + +I+
Sbjct: 473 MIWLALLSACRVHSNLEVAERAAKHIL 499
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--ST 82
CM ++ A ++ + L + W L ++ N + +AL F + T P ST
Sbjct: 250 CMKIEHAHKIFNETLTKNVVKWT-ALLTAYVWNNKHQDALRVFG---DMTKMGALPNQST 305
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ + AC L +L G+++H + + D + N ++ MY +CG++ A VF +
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN 365
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS-------GLC 195
++++VSW ++I G +Q+G A+ + QM++ G+ P++ TF ++ ACS G C
Sbjct: 366 EKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRC 425
Query: 196 CVGLGRQLHAHVIKSEH 212
+ ++V++ +H
Sbjct: 426 FFEYISRYKSNVLRPQH 442
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/590 (30%), Positives = 288/590 (48%), Gaps = 77/590 (13%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN--MYGKCGSLEDAR 135
I +T L++ C S+R L +K+H I+++ + + +++ + + G + A
Sbjct: 2 IHQNTILSLLAKCKSMREL---KKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYAD 58
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+V ++ +V W +MI G + ++ LY QM+++G PD FTF +++AC +
Sbjct: 59 LVLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIA 118
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
G+ +H+ ++KS + + L+ MY S M
Sbjct: 119 DQDCGKCIHSCIVKSGFEADAYTATGLLHMYV---------------------SCADMKS 157
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G VF+ + N+ +W +IAG + EA+ +F +M + P+ +T+ +
Sbjct: 158 GLK-------VFDNIPKWNVVAWTCLIAGYVKNNQPYEALKVFEDMSHWNVEPNEITMVN 210
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGF-------YSNVPVCNAILQHQAG----------- 357
L AC + G +H I K G+ SN+ + AIL+ A
Sbjct: 211 ALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLF 270
Query: 358 -------------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLE 392
E LF M S PD TF V+ CA +L
Sbjct: 271 NKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALA 330
Query: 393 MGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA 452
+G +H Y++KTG+A D+ + L+DMY K G LG+A+++F+ ++ DVV W+S+I G A
Sbjct: 331 LGQTVHAYLLKTGIATDISLATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLA 390
Query: 453 QFGCGEEALKLFRRMRS-SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G G EAL +F+ M+ S + P+H+T +GVL ACSHVGLVEE + +R+M YG++P
Sbjct: 391 MHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPG 450
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
RE C+VDLL+RAG EAE + M +I +W +LL C+ H NV V + +
Sbjct: 451 REHYGCMVDLLSRAGHFREAERLMETMTVQPNIAIWGALLNGCQIHENVCVANQVKVRLK 510
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+++P S +LL NIYA +G+WEEV MK + + K G S +E++
Sbjct: 511 ELEPCQSGVHILLSNIYAKAGRWEEVNVTRKVMKHKRITKTIGHSSVEMK 560
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 284/584 (48%), Gaps = 75/584 (12%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACS---------SLRSLQLGR 100
+ S+ KQ L+ +A+ +Q F T+ ++ +CS + +SL GR
Sbjct: 383 IVSAYAKQGLFRDAIFLSRQMQVE-GFVPDDITFITILYSCSQSALLKQYGNSKSLTDGR 441
Query: 101 KVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNG 160
+VH ++S+ D L N ++ MYG+CGSL+DAR F + QRNV SWT +I+ QNG
Sbjct: 442 QVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNG 501
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
+ + +EL M G ++ TF S++ ACS + LG+ +H + S +I+ N
Sbjct: 502 EASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSN 561
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
AL+ MYT + LD AR VF M ++ SW
Sbjct: 562 ALLNMYTTCE----------------------------SLDEARLVFERMVFRDVVSWTI 593
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
II+ A EA+ L+ M PD +T+ S+L AC S +L +G IH I+ G
Sbjct: 594 IISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASG 653
Query: 341 FYSNVPVCNAIL------------------------------------QHQAGELFRLFS 364
++V V A++ H + F L+
Sbjct: 654 VETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYL 713
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC- 423
M+ +Q P+ +T ++ +C++ +E G+ LH G V+N L++MY KC
Sbjct: 714 EMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCC 773
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
G+L +A+ F + +VVSWSS++ YA+ G + A LF M GV PN VT VL
Sbjct: 774 GNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVL 833
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
ACSH GL +EG + MQ ++ + PT E C+V+LLA++GRV +A F++ M D
Sbjct: 834 HACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPD 893
Query: 544 IVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
W+SLL +C+ H + + G AA+ +L +P NSAA VLL NI
Sbjct: 894 ASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 937
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/577 (27%), Positives = 263/577 (45%), Gaps = 66/577 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T + +SAC++L G+++H ILSS +L N ++ MYGKCGS+E+AR FD M
Sbjct: 12 TLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRM 71
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P+R+++SW AMI +Q+ AI+LY G PD+ TF S++ AC + GR
Sbjct: 72 PERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGR 131
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS--- 258
LH H + + S I N LI+MY+ + DA VF R D+ +W ++I ++
Sbjct: 132 MLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHG 191
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
KL+ A +++M L S V ++ E + + R + GL L
Sbjct: 192 KLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHV-HRLALGSGLDFS--LR 248
Query: 319 ACTSPLSLY--------QGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
S +S+Y + ++ I + S A QH E + F LM
Sbjct: 249 MENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW--EAIKTFELMNLEG 306
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAR 430
KP+ T V+ ACA + + E G ++H ++ + V+N +Y KC + A
Sbjct: 307 VKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADAS 366
Query: 431 ELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVG 490
+F+ + D VSW++++ YA+ G +A+ L R+M+ G P+ +T + +L +CS
Sbjct: 367 RVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSA 426
Query: 491 LVEE---------GLQLYRIMQNE---------------YGIIPT-----------RERR 515
L+++ G Q++ M + YG + +R
Sbjct: 427 LLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRN 486
Query: 516 ----SCVVDLLARAGRVHEAEDFINQMAFDD---DIVVWKSLLASCKTHGNVDVGKRAAE 568
+ ++ LL + G E + + M + + + + SLL +C G++ +GK E
Sbjct: 487 VFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHE 546
Query: 569 NI----LKIDPTNSAALVLLCNIYASSGKWEEVARLM 601
I L+ D S AL+ N+Y + +E ARL+
Sbjct: 547 RIRTKGLESDIITSNALL---NMYTTCESLDE-ARLV 579
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 178/421 (42%), Gaps = 72/421 (17%)
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ D+ T + + AC+ L G+Q+HA ++ S G+ ++ N+L+ MY K + +A
Sbjct: 5 GVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEA 64
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
R F+ M +L SWN +I A +A+
Sbjct: 65 ----------------------------RNAFDRMPERDLISWNAMITVYAQHECGKQAI 96
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-- 353
L++ PD +T SLL AC + L G +H + + F S+ VCN ++
Sbjct: 97 QLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMY 156
Query: 354 -------------------------------HQAGEL---FRLFSLMLASQTKPDHITFN 379
+ G+L F +S M + + ITF
Sbjct: 157 SDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFL 216
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGS-LGSARELFNFMED 438
V+ C+++ LE G +H + +GL + + N L+ MY KC ARE+F +
Sbjct: 217 TVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISR 276
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
P V+SWS+ I Y Q EA+K F M GV+PN TL VL AC+ VG E+G ++
Sbjct: 277 PSVISWSAFIAAYGQHW---EAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRI 333
Query: 499 YR-IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
+ ++ Y T + L A+ RV +A + + D V W +++++
Sbjct: 334 HALVLAGPYTQNTT--VLNAAASLYAKCSRVADASRVFSSIPC-KDAVSWNAIVSAYAKQ 390
Query: 558 G 558
G
Sbjct: 391 G 391
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 105/190 (55%), Gaps = 6/190 (3%)
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
D IT + + ACAA+ G Q+H I+ +GL V + N L+ MY KCGS+ AR F
Sbjct: 9 DEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAF 68
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ M + D++SW+++I YAQ CG++A++L+ R G +P+ VT +L AC G ++
Sbjct: 69 DRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLK 128
Query: 494 EGLQLYRIMQNEYGIIPTRERRSC--VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLL 551
G L+ ++ G ++ C ++ + + G + +A + + +F D+ W +++
Sbjct: 129 FGRMLH---EHFLGTSFVSDQIVCNGLISMYSDCGSLDDATA-VFEWSFRPDVCTWTTVI 184
Query: 552 ASCKTHGNVD 561
A+ HG ++
Sbjct: 185 AAYTRHGKLE 194
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/456 (36%), Positives = 247/456 (54%), Gaps = 37/456 (8%)
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIA 224
++ YV ML +G PD FTF +I++ S LG QLHAHV+K + N +IA
Sbjct: 93 SVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDRDVFVVNNMIA 152
Query: 225 MYTKFDRILDAWNVF-SSIARKDITSWGSMIDGFS---KLDFARTVFNEMESPNLASWNT 280
+Y+ F + A VF S + D+ SW ++I GFS ++D AR +F+ M N SWN
Sbjct: 153 LYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNA 212
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+I+G A S NEA LF EM DR+ S ++ G
Sbjct: 213 MISGYAGSSRINEARKLFDEMPDRD--------------AASWSAMVSG----------- 247
Query: 341 FYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
YS + +CN +A +LF ++ + P+ + ACA + +LE G LH Y
Sbjct: 248 -YSQLGMCN-----EALDLF--MEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSY 299
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
I + L ++V + L+DMY KCGS+ A +FN M + +V SW+S+I G A GCG+EA
Sbjct: 300 IKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEA 359
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L LF +M+ G PN +T + +LT CSH GL+ EG L+ +M YGI P + C+VD
Sbjct: 360 LALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVD 419
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL RAG V EA DF+ +M +W +L+ +C+ HG V++G+ + ++ ++P +
Sbjct: 420 LLGRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGR 479
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
LLCNI+A++ +W++VA + K R V K PG +
Sbjct: 480 YALLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPGNN 515
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 152/322 (47%), Gaps = 40/322 (12%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
++ LI+ S+ + RK+ D ++ K + V N +++ Y + +AR +FDEM
Sbjct: 178 SWTTLITGFSNSGQIDEARKIFD-LMPLK---NTVSWNAMISGYAGSSRINEARKLFDEM 233
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLG 200
P R+ SW+AM++G SQ G N A++L+++M+ ++P++ S + AC+ L + G
Sbjct: 234 PDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEG 293
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R LH+++ + + ++ L+ MY K ILDA VF+ ++ +++ SW
Sbjct: 294 RWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSW---------- 343
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
N++IAG+A EA++LF +M P+ +T +LL C
Sbjct: 344 ------------------NSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGC 385
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDH 375
+ + +G + S + + Y P C L +AG + + KP
Sbjct: 386 SHSGLITEGRWLFSMMTQ--VYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHS 443
Query: 376 ITFNDVMGACAAMASLEMGTQL 397
+ ++GAC +E+G +L
Sbjct: 444 ELWGALVGACRIHGQVELGEEL 465
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 40 RRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
+ FD++ D D + S + + NEAL F + + +SAC+ L
Sbjct: 228 KLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQL 287
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
R+L+ GR +H +I K + + L +L+MYGKCGS+ DA VF+ M +RNV SW +MI
Sbjct: 288 RALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMI 347
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
AG + NG A+ L+ +M G P+ TF +++ CS + GR L
Sbjct: 348 AGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWL 397
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 164/383 (42%), Gaps = 39/383 (10%)
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF 239
+Q S+ +A + L Q HAH+I S SH + L+A
Sbjct: 7 EQLHHPSLSQALTALTATSHLHQAHAHLIVSGLASHPFTVTRLLAC-------------- 52
Query: 240 SSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
++ S L A+T+F +P+ +NTII + S ++++ +
Sbjct: 53 -----------AALSPSASDLPHAKTIFLHTHNPSPFMFNTII---MASSRTLDSVTFYV 98
Query: 300 EMGDRELIPDGLTVRSLL-CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGE 358
M PD T L+ + SP SL G Q+H++++K G +V V N ++ +
Sbjct: 99 CMLHAGHFPDNFTFPFLIKSSSASPTSLL-GHQLHAHVVKFGLDRDVFVVNNMIALYSS- 156
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH--CYIMKTGLALDVFVMNGL 416
FR L A + + + DV+ + Q+ I + N +
Sbjct: 157 -FR--ELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNAM 213
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS-GVRPN 475
+ Y + AR+LF+ M D D SWS+++ GY+Q G EAL LF M + + PN
Sbjct: 214 ISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPN 273
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI 535
LV ++AC+ + +EEG L+ ++ E + + ++D+ + G + +A
Sbjct: 274 EAALVSAVSACAQLRALEEGRWLHSYIK-EKKLRINVTLGTVLLDMYGKCGSILDAAGVF 332
Query: 536 NQMAFDDDIVVWKSLLASCKTHG 558
N M+ + ++ W S++A +G
Sbjct: 333 NLMS-ERNVNSWNSMIAGLALNG 354
>gi|357480561|ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511621|gb|AES92763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 598
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 278/514 (54%), Gaps = 19/514 (3%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQ-RNVVSWTAMI-AGCSQNGQENAAIELYVQMLQSGLM 178
+L+ + +L A +FD MP N WT++I A S + I + M Q G++
Sbjct: 53 VLHFSAEKSNLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGIL 112
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNV 238
P FTF S++ AC + V G+Q+HA +++S + I Q AL+ MY K + DA +V
Sbjct: 113 PSGFTFSSVLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDV 172
Query: 239 FSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
F + +D+ +W +MI G++K + AR +F+ M N +W T++AG A+ + AM
Sbjct: 173 FDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAM 232
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--- 352
L+ M +E + T +++ ++ + +I I N C A+L
Sbjct: 233 ELYDVMNGKEEV----TWVAMIAGYGKLGNVSEARRIFDEIPVP---LNPSTCAALLACY 285
Query: 353 --QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
A E ++ M ++ K + + ACA + + M + L Y ++ G
Sbjct: 286 AQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRM-SNLLTYDIEEGFCEKT 344
Query: 411 FVM-NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
++ N L+ M KCG++ A FN M + D+ ++S++I +A+ G ++A+ LF +M+
Sbjct: 345 HIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQ 404
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVH 529
G+ PN VT VGVL ACS GL+EEG + ++IM YGI P E +C+VDLL RAG++
Sbjct: 405 EGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLE 464
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
+A I + + D W SLLA+C+ +GNV++G+ AA ++ +IDPT+S VLL N YA
Sbjct: 465 KAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYA 524
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
S+ KWE + M ++G++K G SWI+ +TK
Sbjct: 525 SNDKWERAEEVKKLMSKKGMKKPSGYSWIQRETK 558
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 200/457 (43%), Gaps = 77/457 (16%)
Query: 69 FLQNNTNFR-------------IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
FL ++T+FR I PS T++ +++AC + ++ G++VH ++ S
Sbjct: 89 FLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAVFEGKQVHARLVQSGFLG 148
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+ ++ +L+MY KCG + DAR VFD M R+VV+WTAMI G ++ G+ A L+ M
Sbjct: 149 NKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNMG 208
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ + FT+ + ++A Y + +
Sbjct: 209 ER----NSFTWTT-----------------------------------MVAGYANYGDMK 229
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKL---DFARTVFNEMESP-NLASWNTIIAGVASCS 289
A ++ + K+ +W +MI G+ KL AR +F+E+ P N ++ ++A A
Sbjct: 230 AAMELYDVMNGKEEVTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNG 289
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP-VC 348
+A EA+ ++ +M ++ + + + AC + L + + +Y I++GF V
Sbjct: 290 HAREAIEMYEKMRRAKIKVTDVAMVGAISAC-AQLRDIRMSNLLTYDIEEGFCEKTHIVS 348
Query: 349 NAI--LQHQAGEL---FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
NA+ +Q + G + +R F++M D T++ ++ A A + L + +
Sbjct: 349 NALIHMQSKCGNIDLAWREFNIM----RNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQ 404
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-----DPDVVSWSSLIVGYAQFGCGE 458
GL + G+++ G + F M +P ++ ++ + G E
Sbjct: 405 EGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLE 464
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+A L + +S + T +L AC G VE G
Sbjct: 465 KAYSLIKENSTSA---DATTWGSLLAACRVYGNVELG 498
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 196/624 (31%), Positives = 303/624 (48%), Gaps = 109/624 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+SACS + +L G +VH +L + D + N +++ Y +CG ++ R +FD M
Sbjct: 132 TFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGM 191
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+RNVVSWT++I G S A+ L+ QM ++G+ P+ T +I AC+ L + LG+
Sbjct: 192 LERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGK 251
Query: 202 QLHAHVIKSEHGSHL--ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
++ +++ SE G L I NAL+ MY K I A
Sbjct: 252 KVCSYI--SELGMELSTIMVNALVDMYMKCGDICAA------------------------ 285
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
R +F+E + NL +NTI++ A++ + + EM + PD +T+ S + A
Sbjct: 286 ----RQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAA 341
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------QHQAGELF----------- 360
C L G H+Y+++ G + NAI+ + A ++F
Sbjct: 342 CAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTW 401
Query: 361 -----------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH----- 398
R+F ML + D +++N ++GA ++ E +L
Sbjct: 402 NSLIAGLVRDGDMELAWRIFDEML----ERDLVSWNTMIGALVQVSMFEEAIELFREMQN 457
Query: 399 ------------------------------CYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
YI K + +D+ + L+DM+ +CG S
Sbjct: 458 QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSS 517
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH 488
A +F ME DV +W++ I A G E A++LF M V+P+ V V +LTACSH
Sbjct: 518 AMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSH 577
Query: 489 VGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWK 548
G V++G QL+ M+ +GI P C+VDLL RAG + EA D I M + + VVW
Sbjct: 578 GGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWG 637
Query: 549 SLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
SLLA+C+ H NV++ AAE + ++ P VLL NIYAS+GKW +VAR+ MKE+G
Sbjct: 638 SLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKG 697
Query: 609 VRKVPGQSWIEIQTKIH--ASGND 630
V+KVPG S IE+Q IH SG++
Sbjct: 698 VQKVPGSSSIEVQGLIHEFTSGDE 721
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 144/612 (23%), Positives = 264/612 (43%), Gaps = 115/612 (18%)
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSK--CQPDAVLHNHILNMYGKCGSLED-- 133
I ++ + L+ C +L+ L +++H ++ C A N ++ + G+LE
Sbjct: 23 ITRNSSSKLLVNCKTLKEL---KQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLD 79
Query: 134 -ARMVF--DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
AR F D+ ++ + +I G + G + AI LYVQML G++PD++TF ++ A
Sbjct: 80 YARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSA 139
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
CS + + G Q+H V+K + N+LI Y + ++ +F + +++ SW
Sbjct: 140 CSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSW 199
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
S+I+G+S D ++ EA+SLF +MG+ + P+
Sbjct: 200 TSLINGYSGRDLSK----------------------------EAVSLFFQMGEAGVEPNP 231
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI------------------- 351
+T+ ++ AC L G ++ SYI + G + + NA+
Sbjct: 232 VTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDE 291
Query: 352 ----------------LQHQ-AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+ H+ A ++ + ML +PD +T + ACA + L +G
Sbjct: 292 CANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVG 351
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG---- 450
H Y+++ GL + N ++DMY+KCG +A ++F M + VV+W+SLI G
Sbjct: 352 KSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRD 411
Query: 451 ---------------------------YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
Q EEA++LFR M++ G+ + VT+VG+
Sbjct: 412 GDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIA 471
Query: 484 TACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDD 543
+AC ++G ++ + ++ I + + +VD+ +R G A +M D
Sbjct: 472 SACGYLGALDLAKWVCTYIEKN-DIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME-KRD 529
Query: 544 IVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ W + + GN +++ E +K D AL+ C + G ++ +
Sbjct: 530 VSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTAC---SHGGSVDQGRQ 586
Query: 600 LMGSM-KERGVR 610
L SM K G+R
Sbjct: 587 LFWSMEKAHGIR 598
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 221/476 (46%), Gaps = 24/476 (5%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C +D ++ D L R W L + ++L EA+ F F P T
Sbjct: 178 CGKVDLGRKLFDGMLERNVVSWT-SLINGYSGRDLSKEAVSLF-FQMGEAGVEPNPVTMV 235
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ISAC+ L+ L+LG+KV +I + ++ N +++MY KCG + AR +FDE +
Sbjct: 236 CVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANK 295
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N+V + +++ + + + + +MLQ G PD+ T S I AC+ L + +G+ H
Sbjct: 296 NLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSH 355
Query: 205 AHVIKSE-HGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---L 260
A+V+++ G IS NA+I MY K + A VF + K + +W S+I G + +
Sbjct: 356 AYVLRNGLEGWDNIS-NAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDM 414
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ A +F+EM +L SWNT+I + S EA+ LF EM ++ + D +T+ + AC
Sbjct: 415 ELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASAC 474
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-----QAGELFRLFSLMLASQTKPDH 375
+L + +YI K + ++ + A++ +F M K D
Sbjct: 475 GYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRM----EKRDV 530
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+ +G A + E +L +++ + D V L+ GS+ R+LF
Sbjct: 531 SAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWS 590
Query: 436 MED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
ME P +V + ++ + G EEA+ L + M + PN V +L AC
Sbjct: 591 MEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMP---IEPNDVVWGSLLAAC 643
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 43/256 (16%)
Query: 365 LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFV--MNGLMDMYVK 422
L+ AS + + IT N +L+ QLHC +MK GL +N L+ V+
Sbjct: 12 LVPASLKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQ 71
Query: 423 CGSLGSARELFNFMEDPD-----VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
G+L S N D D + ++ LI GYA G G++A+ L+ +M G+ P+
Sbjct: 72 IGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKY 131
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T +L+ACS + + EG+Q VH A + +
Sbjct: 132 TFPFLLSACSKILALSEGVQ------------------------------VHGA---VLK 158
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M + DI V SL+ G VD+G++ + +L+ N + L N Y+ +E
Sbjct: 159 MGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLE---RNVVSWTSLINGYSGRDLSKEA 215
Query: 598 ARLMGSMKERGVRKVP 613
L M E GV P
Sbjct: 216 VSLFFQMGEAGVEPNP 231
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 11 LPRWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYN-EALVAFDF 69
L +W C Y + ++ + L +VD F R D +F + K+++ A +
Sbjct: 482 LAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMA 541
Query: 70 LQNNTNF-----------RIRPS--TYADLISACSSLRSLQLGRKVHDHILSSK-CQPDA 115
++ NT +++P + L++ACS S+ GR++ + + +P
Sbjct: 542 MEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHI 601
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMP-QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ 174
V + ++++ G+ G LE+A + MP + N V W +++A C ++ +N + Y
Sbjct: 602 VHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKH--KNVELAHYAAEKL 659
Query: 175 SGLMPDQ 181
+ L P++
Sbjct: 660 TQLAPER 666
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/636 (27%), Positives = 302/636 (47%), Gaps = 67/636 (10%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C + A V D R D W + + K Y E L ++ N ++
Sbjct: 241 DMYCKCGDVHSAQRVFDRMGVRDDVSWA-TMMAGYVKNGCYFEGLQLLHKMRRG-NVKMN 298
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+ + + +R L+ G++++++ L D V+ I+ MY KCG L+ AR +F
Sbjct: 299 KVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFL 358
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ R++V+W+A ++ + G + ++ M GL PD+ ++ C+ + +GL
Sbjct: 359 SLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGL 418
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+ +H + IK++ S + L++MY +F+ +F+
Sbjct: 419 GKIMHCYAIKADMESDISMVTTLVSMYIRFE-------LFT------------------- 452
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
+A T+FN M+ ++ WNT+I G + + A+ +F+ + ++PD T+ L A
Sbjct: 453 --YAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSA 510
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA----------------------- 356
C L G +H I K GF S++ V A++ A
Sbjct: 511 CAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVS 570
Query: 357 --------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
E F M +P+ +TF ++ A + ++ L H I+
Sbjct: 571 WNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCII 630
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ G + N L+DMY KCG L + + F+ ME+ D +SW++++ YA G GE A+
Sbjct: 631 RMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVA 690
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M+ S VR + V+ + VL+AC H GL++EG ++ M ++ + P+ E +C+VDLL
Sbjct: 691 LFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLL 750
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
AG E +N+M + D VW +LLA+CK H NV +G+ A ++LK++P N V
Sbjct: 751 GCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHV 810
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+L +IYA G+W + R + G++K+PG SW+
Sbjct: 811 VLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 158/643 (24%), Positives = 267/643 (41%), Gaps = 127/643 (19%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ ++ AC+S G ++ I+ + + D + +++M+ K G L++AR VFD+M
Sbjct: 101 TFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKM 160
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P ++ V W AMI+G SQ+ A+E++ +M G D+ + ++ A S L VG +
Sbjct: 161 PVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCK 220
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK-- 259
+H +V++ + N+LI MY K + A VF + +D SW +M+ G+ K
Sbjct: 221 SIHGYVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNG 278
Query: 260 ------------------------------------LDFARTVFNEMESPNLAS----WN 279
L+ + ++N L S
Sbjct: 279 CYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVAT 338
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELI-------------------------------P 308
I+ A C +A LF + R+L+ P
Sbjct: 339 PIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKP 398
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------- 353
D + L+ CT ++ G +H Y IK S++ + ++
Sbjct: 399 DKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLF 458
Query: 354 ------------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
H A E+F L S PD T + ACA M
Sbjct: 459 NRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQL---SGILPDSGTMVGLFSACAIMD 515
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLI 448
L++GT LH I K+G D+ V LMDMY KCGSL S LF + D VSW+ +I
Sbjct: 516 DLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMI 575
Query: 449 VGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
GY G EA+ FRRM+ VRPN VT V +L A S++ ++ E + + + G
Sbjct: 576 AGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCII-RMGF 634
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN----VDVGK 564
+ + ++D+ A+ G++ +E ++M + D + W ++L++ HG V +
Sbjct: 635 LSCTLIGNSLIDMYAKCGQLRYSEKCFHEME-NKDTISWNAMLSAYAMHGQGELAVALFS 693
Query: 565 RAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
E+ +++D + +++ C SG +E + SM E+
Sbjct: 694 VMQESNVRVDSVSYISVLSACR---HSGLIQEGWDIFASMCEK 733
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 205/463 (44%), Gaps = 37/463 (7%)
Query: 119 NHILNMYGKCGSLEDARMV---FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
NH L + C + + F ++ +++ + + I S+ + AI LY +L+
Sbjct: 34 NHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKI 93
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
GL PD+FTF +++AC+ G ++ ++ + + +LI M+ K + +A
Sbjct: 94 GLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA 153
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV----ASCSNA 291
NVF + KD W +MI G S+ N E+ + W + G S N
Sbjct: 154 RNVFDKMPVKDGVCWNAMISGLSQ------SLNPCEALEMF-WRMQMEGFEVDKVSILNL 206
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSP--LSLY-QGMQIHS---YIIKKGFYSNV 345
A+S ++G + I G VR +C S + +Y + +HS + G +V
Sbjct: 207 APAVSRLGDVGCCKSI-HGYVVRRSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDV 265
Query: 346 PVCNAILQHQAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ + E +L M K + + + + A M LE G +++ Y
Sbjct: 266 SWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYA 325
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ GL D+ V ++ MY KCG L ARELF +E D+V+WS+ + + G E L
Sbjct: 326 LQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVL 385
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG--LQLYRI---MQNEYGIIPTRERRS 516
+F+ M+ G++P+ L +++ C+ + + G + Y I M+++ ++ T
Sbjct: 386 SIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTT----- 440
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+V + R A N+M DIVVW +L+ +G+
Sbjct: 441 -LVSMYIRFELFTYAMTLFNRMQI-KDIVVWNTLINGFTKYGD 481
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/593 (29%), Positives = 290/593 (48%), Gaps = 69/593 (11%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSL 93
FD+I D L S+L L NEA+ + LQ I+P + AC+
Sbjct: 35 FDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG---IKPDMPVFLAAAKACAVS 91
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++VHD D + N +++ YGKC +E AR VFD++ R+VVSWT++
Sbjct: 92 GDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLS 151
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+ + G ++++ +M SG+ P+ T SI+ AC+ L + G+++H ++
Sbjct: 152 SCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMV 211
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+L +AL+++Y K + +A R VF+ M
Sbjct: 212 VNLFVCSALVSLYAKCLSVREA----------------------------RMVFDLMPHR 243
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ SWN ++ + SLF +M + D T +++ C + +++
Sbjct: 244 DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMF 303
Query: 334 SYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEM 393
+ K GF KP+ IT + ++ AC+ +L M
Sbjct: 304 RKMQKMGF------------------------------KPNEITISSILPACSFSENLRM 333
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++HCY+ + D+ L+ MY KCG L +R +F+ M DVV+W+++I+ A
Sbjct: 334 GKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAM 393
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G G+EAL LF +M S V+PN VT GVL+ CSH LVEEG+Q++ M ++ + P
Sbjct: 394 HGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDAN 453
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
SCVVD+ +RAGR++EA FI M + W +LLA+C+ + NV++ K +A+ + +I
Sbjct: 454 HYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEI 513
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+P N V L NI ++ W E +++ MKERG+ K PG SW+++ K+H
Sbjct: 514 EPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHT 566
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN 475
L+ + + G AR+LF+ + PD + S+LI G EA+K++ ++ G++P+
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 476 HVTLVGVLTACSHVG 490
+ AC+ G
Sbjct: 78 MPVFLAAAKACAVSG 92
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/579 (31%), Positives = 287/579 (49%), Gaps = 67/579 (11%)
Query: 50 LFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
+ CK N + F ++N F +A + AC +G VH I
Sbjct: 123 MIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFA--LKACGQFAEKIVGMAVHSVIWK 180
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
D + N ++ Y + G L AR +FDE ++VV+WT MI G ++N + AI L
Sbjct: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ ML S + P++ T +++ ACS +G+ LH H+ + + L NA++ MY K
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVK 300
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
L AR +FN ME ++ SW +++ G A
Sbjct: 301 C----------------------------GCLTTAREIFNNMERRDVFSWTSLLNGYAKN 332
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
+ A LF EM +R ++ + G+ N
Sbjct: 333 GDLGSARKLFDEMPERNIVSWNAMI-------------------------AGYSQN---- 363
Query: 349 NAILQHQAGELFRLFSLML-ASQTKPDHITFNDVMGACAAMASLEMGTQLHC-YIMKTGL 406
Q E LF M+ P T V+ A + LEMG ++HC ++ K G+
Sbjct: 364 -----SQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGI 418
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+ + + N +MDMY KCGS+ +A +LF+ M + ++VSW+S+I YA +G ++AL LF +
Sbjct: 419 QVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQ 478
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M SG++P+H+T +GVL+ACS+ G V EG + M+N +G+ P RE +C+VDLL+R G
Sbjct: 479 MIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVG 538
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EA + I++M + W +LL +C+ HGNV++ K A E +L++DP +S LL N
Sbjct: 539 LLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLAN 598
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
I A KW++V + M+ERGV+KVPG S IEI+ K H
Sbjct: 599 ICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFH 637
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 105/265 (39%), Gaps = 39/265 (14%)
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM--YVKCGSLGSARELFNFMED 438
++ +C++M L+ Q+ +I TGL +F + L+ G + A +F+ E
Sbjct: 58 ILQSCSSMFQLK---QIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTEL 114
Query: 439 PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
P+ W+++I GY + FR+M + + + V L AC G+ +
Sbjct: 115 PNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAV 174
Query: 499 YRIMQN---------EYGIIPTRERRSCV---------------------VDLLARAGRV 528
+ ++ + G+I C+ ++ AR +
Sbjct: 175 HSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWL 234
Query: 529 HEAEDFINQMAFDD---DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV-LL 584
EA N M D + V +LL++C G+ ++GK E+I + D T S L+ +
Sbjct: 235 DEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAM 294
Query: 585 CNIYASSGKWEEVARLMGSMKERGV 609
++Y G + +M+ R V
Sbjct: 295 LDMYVKCGCLTTAREIFNNMERRDV 319
>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
Length = 810
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 307/644 (47%), Gaps = 112/644 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY+ +SAC++ L +GR VH +L + D + ++NMY KCG + A F M
Sbjct: 172 TYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRM 231
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P RNVVSWT IAG Q+ + +A+ L +M+++G+ +++T SI+ AC+ + V
Sbjct: 232 PVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREAS 291
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVF---SSIARKDITSWGSMIDGFS 258
Q+H V+K+E + + ALI+ YT F I + VF +++ + I W + I G S
Sbjct: 292 QIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVS 349
Query: 259 KLDFARTV------FNEMESPNLASWNTIIAGVAS------------------------- 287
R+V F++ PN + ++ + V S
Sbjct: 350 NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSA 409
Query: 288 -------CSNANEAMSLFSEMGDRELI-------------------------------PD 309
C N ++ +F EM +R+ + PD
Sbjct: 410 LSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPD 469
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSY---------IIKKGFYSNVPVCNAILQHQ----- 355
+++ ++L AC P L +G ++H + I F S C + +
Sbjct: 470 HVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFINDCFISMYSKCQGVQTARRIFDA 529
Query: 356 ---------------------AGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
E LF LM+A+ + D + ++ CA +A
Sbjct: 530 TPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYC 589
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
LH Y +K G+ D V + L+ +Y + G++ +R++F+ + PD+V+W+++I GYAQ
Sbjct: 590 KPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 649
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G + AL +F M GVRP+ V LV VL+ACS GLVE+G + M+ YG+ P +
Sbjct: 650 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQH 709
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
C+VDLL R+GR+ EA+ F++ M D++VW +LLA+C+ H + +G R EN ++
Sbjct: 710 YCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLG-RFVENKIREG 768
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
+S + L NI A+SG WEEVAR+ +MK GV K PG S +
Sbjct: 769 NYDSGSFATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 211/457 (46%), Gaps = 22/457 (4%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
+A + ++++ K G L DA VF + + V W A ++G +NG+ A+E++ M+
Sbjct: 103 NAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV 162
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
P+ FT+ + AC+ + +GR +H V++ + + +L+ MY K +
Sbjct: 163 WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMG 222
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLD---FARTVFNEMESPNLA----SWNTIIAGVA 286
A F + +++ SW + I GF + D A + EM +A + +I+ A
Sbjct: 223 AAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACA 282
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNV 345
S EA + + E+ D + +L+ T+ + +++ + ++ G SN
Sbjct: 283 QMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTN----FGFIELSEKVFEEAGTVSNR 338
Query: 346 PVCNAIL----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+ +A + H +L M +P+ + V +++ S+E G QLH
Sbjct: 339 SIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVF---SSVNSIEFGGQLHSSA 395
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
+K G + V + L MY +C ++ + ++F M++ D VSW++++ G+A G EA
Sbjct: 396 IKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAF 455
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
FR M G +P+HV+L +L+AC+ + +G +++ YG T C + +
Sbjct: 456 LTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYG--ETTFINDCFISM 513
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ V A + D V+W S+++ T+G
Sbjct: 514 YSKCQGVQTARRIFDATPRKDQ-VMWSSMISGYATNG 549
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C + A + D+ R+ +W + S EA+ F L + RI
Sbjct: 514 YSKCQGVQTARRIFDATPRKDQVMWS-SMISGYATNGCGEEAISLFQ-LMVAASIRIDSY 571
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+ ++S C+ + + +H + + + D + + ++ +Y + G+++D+R VFDE+
Sbjct: 572 ICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEI 631
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
++V+WT +I G +Q+G A+ ++ M+Q G+ PD S++ ACS
Sbjct: 632 SVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACS 682
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 346 PVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
P +L EL A + P + + + ACA + + Q++C K G
Sbjct: 40 PRAPDLLARLPAELASFARARAAGRAAPSQFAYGNALAACARAPAPALAEQVYCAAWKDG 99
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L+ + +V G++D+ K G L A +F + V W++ + G + G G A+++FR
Sbjct: 100 LSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFR 159
Query: 466 RMRSSGVRPNHVTLVGVLTACS-----HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
M PN T G L+AC+ VG GL L R EY + + +V+
Sbjct: 160 DMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRR--DPEYDVFVG----TSLVN 213
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ A+ G + A +M ++V W + +A
Sbjct: 214 MYAKCGDMGAAMREFWRMPV-RNVVSWTTAIA 244
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 302/596 (50%), Gaps = 78/596 (13%)
Query: 40 RRFDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACS 91
R F+ I D LF + K + A+ F L+ + + P TY ++
Sbjct: 63 RIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHG---VWPDNYTYPYVLKGIG 119
Query: 92 SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTA 151
+ ++ G KVH ++ + + D + N ++MY + G +E VF+EMP R+ VSW
Sbjct: 120 CIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNI 179
Query: 152 MIAGCSQNGQENAAIELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
MI+G + + A+++Y +M +S P++ T S + AC+ L + LG+++H + I S
Sbjct: 180 MISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IAS 238
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
E I NAL+ MY K + AR +F+ M
Sbjct: 239 ELDLTTIMGNALLDMYCKCGHV----------------------------SVAREIFDAM 270
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
N+ W +++ G C ++A +LF R+++ L+ M
Sbjct: 271 TVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIV------------------LWTAM 312
Query: 331 QIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
I+ Y+ F E LF M KPD ++ CA +
Sbjct: 313 -INGYVQFNRF---------------EETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGA 356
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
LE G +H YI + + +D V L++MY KCG + + E+FN +++ D SW+S+I G
Sbjct: 357 LEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICG 416
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
A G EAL+LF+ M++ G++P+ +T V VL+ACSH GLVEEG +L+ M + Y I P
Sbjct: 417 LAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEP 476
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQM-AFDDDIVV--WKSLLASCKTHGNVDVGKRAA 567
E C +DLL RAG + EAE+ + ++ A +++I+V + +LL++C+T+GN+D+G+R A
Sbjct: 477 NLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLA 536
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTK 623
+ K+ ++S+ LL +IYAS+ +WE+V ++ MK+ G++KVPG S IE+ K
Sbjct: 537 TALAKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVDGK 592
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 193/448 (43%), Gaps = 73/448 (16%)
Query: 34 VVDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+V+ F + F+++ D D + S + + EA+ + + +N + +T +
Sbjct: 158 LVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTL 217
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM------ 141
SAC+ LR+L+LG+++HD+I +S+ ++ N +L+MY KCG + AR +FD M
Sbjct: 218 SACAVLRNLELGKEIHDYI-ASELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVN 276
Query: 142 -------------------------PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
P R++V WTAMI G Q + I L+ +M G
Sbjct: 277 CWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRG 336
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAW 236
+ PD+F +++ C+ + G+ +H ++ ++ + ALI MY K I ++
Sbjct: 337 VKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSF 396
Query: 237 NVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
+F+ + KD TSW S II G+A +EA+
Sbjct: 397 EIFNGLKEKDTTSWTS----------------------------IICGLAMNGKPSEALE 428
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQI-HSYIIKKGFYSNVP--VCNAILQ 353
LF M L PD +T ++L AC+ + +G ++ HS N+ C L
Sbjct: 429 LFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLL 488
Query: 354 HQAGELFRLFSLMLASQTKPDHIT---FNDVMGACAAMASLEMGTQLHCYIMKTGLALDV 410
+AG L L+ + + I + ++ AC +++MG +L + K + D
Sbjct: 489 GRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVK-SSDS 547
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMED 438
+ L +Y R++ N M+D
Sbjct: 548 SLHTLLASIYASADRWEDVRKVRNKMKD 575
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 296/593 (49%), Gaps = 77/593 (12%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T ++ C++L + GR VH + S + N +++MY KCG + DA F E
Sbjct: 166 ATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLE 225
Query: 141 MPQ---RNVVSWTAMIAGCSQNGQENAAIELY--VQMLQSGLMPDQFTFGSIIRACSGLC 195
P RNVVSW M+ G ++NG+ AA L +QM + G+ D+ T S++ CSGL
Sbjct: 226 APPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLP 285
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQ---NALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ R+LHA V++ G HL NALIA Y + +L A VF I K ++SW
Sbjct: 286 ELAKLRELHAFVVR--RGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSW-- 341
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR-ELIPDGL 311
N +I A A+ A+ LF EM + PD
Sbjct: 342 --------------------------NALIGAHAQNGEASAAIELFREMTNACGQKPDWF 375
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGF----YSNVPVCNAILQ-------------- 353
++ SLL AC + L G H +I++ G + V + + +Q
Sbjct: 376 SIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAV 435
Query: 354 ------------------HQAGELFRLFSLMLASQTK--PDHITFNDVMGACAAMASLEM 393
GE +LF M + + P + + AC+ + ++ +
Sbjct: 436 EEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRL 495
Query: 394 GTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQ 453
G ++HC+ +K L D F+ + ++DMY KCGS+ AR F+ ++ D VSW+ +I GYA
Sbjct: 496 GKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAV 555
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
G G+EA+ L+ +M G+ P+ T +G+L AC H G++E+GL ++ M+N I E
Sbjct: 556 NGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLE 615
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+CV+ +L+RAGR +A + M + D + S+L++C HG V++GK+ A+ +L++
Sbjct: 616 HYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLEL 675
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
+P + VL N+YA S +W+E+ ++ +++ GV K PG SWI+I K+++
Sbjct: 676 EPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYS 728
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 234/523 (44%), Gaps = 97/523 (18%)
Query: 99 GRKVHDHILSSK---CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
GR+VH +++K D + N +++MYG+CG ++DA VF+ M RN+VSW A++A
Sbjct: 82 GRQVH--AVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAA 139
Query: 156 CSQNGQENAAIELY---VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ +EL+ ++ L PD+ T +++ C+ L GR +H +KS
Sbjct: 140 VA---DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGW 196
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
+ N L+ MY K + DA F +E+
Sbjct: 197 DAAPRVSNVLVDMYAKCGEMADAECAF------------------------------LEA 226
Query: 273 P-----NLASWNTIIAGVASCSNANEAMSLFSEMG--DRELIPDGLTVRSLLCACTSPLS 325
P N+ SWN ++ G A A A L EM +R + D +T+ S+L C+
Sbjct: 227 PPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPE 286
Query: 326 LYQGMQIHSYIIKKGFYSN---VP----------------------VC-------NAILQ 353
L + ++H++++++G + VP +C NA++
Sbjct: 287 LAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIG 346
Query: 354 HQAG--------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
A ELFR + A KPD + ++ AC + L G H +I++ G
Sbjct: 347 AHAQNGEASAAIELFR--EMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNG 404
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
L D F+ L+ +Y++CG AR LF+ +E+ D VSW+++I GY+Q G E+L+LFR
Sbjct: 405 LEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFR 464
Query: 466 RMRSS--GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
M+S G P+ + L ACS + V G +++ + + S ++D+ +
Sbjct: 465 EMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMH-CFALKADLCEDSFLSSSIIDMYS 523
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRA 566
+ G V +A F +++ D V W ++ +G GK A
Sbjct: 524 KCGSVDDARVFFDRLKA-KDAVSWTVMITGYAVNGR---GKEA 562
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 193/462 (41%), Gaps = 92/462 (19%)
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQS--GLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
W ++A S+ G+ A+ + ++L + G+ PD+FT +++C G GRQ+HA
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAV 88
Query: 207 VIK--SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
K G + N+L++MY + R+ DA VF +A +
Sbjct: 89 AAKLGLADGDPFVG-NSLVSMYGRCGRVDDAEKVFEGMAGR------------------- 128
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLF----SEMGDRELIPDGLTVRSLLCAC 320
NL SWN ++A VA + + LF ++G PD T+ ++L C
Sbjct: 129 ---------NLVSWNALMAAVA---DPRRGLELFRDCLEDLGGTA-APDEATLVTVLPMC 175
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
+ G +H +K G+ + V N ++ A
Sbjct: 176 AALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVV 235
Query: 357 ------------GELFRLFSLMLASQTK-----PDHITFNDVMGACAAMASLEMGTQLHC 399
GE F L+ Q + D IT V+ C+ + L +LH
Sbjct: 236 SWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHA 295
Query: 400 YIMKTGLALDV-FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
++++ GL L V N L+ Y +CG L A +F+ + V SW++LI +AQ G
Sbjct: 296 FVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEAS 355
Query: 459 EALKLFRRMRSS-GVRPNHVTLVGVLTACSHVGLVEEGLQLYR-IMQNEYGIIPTRERRS 516
A++LFR M ++ G +P+ ++ +L AC ++ + G + I++N G+ R
Sbjct: 356 AAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRN--GLEKDSFIRV 413
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
++ + + GR A + + D+ V W +++A +G
Sbjct: 414 SLLSVYIQCGRESLARVLFDAVEEKDE-VSWNTMIAGYSQNG 454
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 192/639 (30%), Positives = 320/639 (50%), Gaps = 49/639 (7%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
L++A + D R W+ + S Y EAL F+ + + +++ ++
Sbjct: 57 LEEARHLFDQMPNRTVSSWN-TMISGYSLLGRYPEALTLVSFMHRSC-VALNEVSFSAVL 114
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE------- 140
SAC+ S LG++VH +L S + ++ + +L C + +A +VF+E
Sbjct: 115 SACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQV 174
Query: 141 ------------------------MPQRNVVSWTAMIAGCS--QNGQENAAIELYVQMLQ 174
MP R+VV+WT +I+G + ++G E A ++L+ M +
Sbjct: 175 LWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERA-LDLFGCMRR 233
Query: 175 SG-LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
S ++P++FT ++R C+ L + G+ +H IK A+ Y + I
Sbjct: 234 SSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAID 293
Query: 234 DAWNVFSSIA-RKDITSWGSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
DA V+ S+ + + S+I G +++ A VF E+ N S+N +I G A
Sbjct: 294 DAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSG 353
Query: 290 NANEAMSLFSEMGDRELIPDGLT-VRSLLCACTSPLSLYQGMQIHSYIIKKGFYS--NVP 346
++ LF +M P+ LT + +++ + L + +++ + Y N
Sbjct: 354 QFEKSKRLFEKMS-----PENLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSM 408
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ I+ + E L+ M TF+ + AC+ + S G LH +++KT
Sbjct: 409 MSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPF 468
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
++V+V L+D Y KCG L A+ F + P+V +W++LI GYA G G EA+ LFR
Sbjct: 469 QVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRS 528
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
M G+ PN T VGVL+AC+H GLV EGL+++ MQ YG+ PT E +CVVDLL R+G
Sbjct: 529 MLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSG 588
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCN 586
+ EAE+FI +M + D ++W +LL + +++VG+RAAE + +DP A V+L N
Sbjct: 589 HLKEAEEFIIKMPIEADGIIWGALLNASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSN 648
Query: 587 IYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+YA G+W + +L ++ +RK PG SWIE+ KIH
Sbjct: 649 MYAILGRWGQKTKLRKRLQSLELRKDPGCSWIELNNKIH 687
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 215/473 (45%), Gaps = 49/473 (10%)
Query: 127 KCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGS 186
K G LE+AR +FD+MP R V SW MI+G S G+ A+ L M +S + ++ +F +
Sbjct: 53 KMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCVALNEVSFSA 112
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
++ AC+ LG+Q+H+ ++KS + + +AL+ I +A VF + +
Sbjct: 113 VLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGN 172
Query: 247 ITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANE-AMSLFSEM- 301
W M+ G+ K +D A +F +M ++ +W T+I+G A + E A+ LF M
Sbjct: 173 QVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMR 232
Query: 302 GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG---- 357
E++P+ T+ ++ C L G +H IK G + + A+ + G
Sbjct: 233 RSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAI 292
Query: 358 -ELFRLFSLM---------------LASQTKPDH-------------ITFNDVMGACAAM 388
+ R++ M L S+ + + +++N ++ A
Sbjct: 293 DDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMS 352
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSL 447
E +L + L +N ++ +Y K G L A +LF+ + + + VSW+S+
Sbjct: 353 GQFEKSKRLFEKMSPENLT----SLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSM 408
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY 506
+ GY G +EAL L+ MR V + T + ACS + +G L+ +++ +
Sbjct: 409 MSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPF 468
Query: 507 GIIPTRERRSCVVDLLARAGRVHEAE-DFINQMAFDDDIVVWKSLLASCKTHG 558
+ + +VD ++ G + EA+ FI+ F ++ W +L+ HG
Sbjct: 469 QV--NVYVGTALVDFYSKCGHLAEAQRSFIS--IFSPNVAAWTALINGYAYHG 517
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 285/586 (48%), Gaps = 67/586 (11%)
Query: 84 ADLISACSSLRSLQLGRKVHDH-ILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
A L+ +C L+ GR +H +LS L NH++ MY C L A +F MP
Sbjct: 24 ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP 83
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
+RN VSWT +++G SQN A+ + M ++G+ P +F S RA + L G Q
Sbjct: 84 RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 143
Query: 203 LHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF 262
LH ++ + L + L MY+K + +A VF + +KD +
Sbjct: 144 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVA------------- 190
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACT 321
W +I G A + A+ F +M L+ D S+L A
Sbjct: 191 ---------------WTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASG 235
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG------------------------ 357
+ IH + K GF V V NA++ A
Sbjct: 236 GLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGT 295
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E ++ + +P+ TF+ ++ CA A LE G QLH ++KT
Sbjct: 296 SMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKT 355
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
L D FV + L+DMY KCG + + +LFN +E ++W+++I +AQ G G EA++ F
Sbjct: 356 DLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAF 415
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM SG+RPNH+ V +LTACSH GLV+EGL+ + M+ +GI P E SC++D R
Sbjct: 416 DRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGR 475
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AGR+ EA FI++M + W SLL +C+ G+ ++G+ AA+N++K++P N+ V L
Sbjct: 476 AGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSL 535
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
IYAS G+WE+V + M++ ++K+PG SW++ K H G++
Sbjct: 536 SGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSE 581
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 172/430 (40%), Gaps = 42/430 (9%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C LL +A V D ++ W + K A+++F ++
Sbjct: 165 DMYSKCGLLSEACRVFDQMPQKDAVAWT-AMIDGYAKNGSLEAAVLSFRDMKREGLVGAD 223
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+ ++SA L+ L + +H + + + + + N +++MY K +E A V
Sbjct: 224 QHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK 283
Query: 140 EMPQR-NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
P NVVS T+MI G + A+ +YV++ + G+ P++FTF S+I+ C+ +
Sbjct: 284 IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLE 343
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
G QLHA VIK++ + L+ MY K I + +F
Sbjct: 344 QGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLF------------------- 384
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
NE+E +WN +I A + EA+ F M + P+ + SLL
Sbjct: 385 ---------NEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 435
Query: 319 ACTSPLSLYQGM-------QIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQT 371
AC+ + +G+ + H K+ YS C +AG L + +
Sbjct: 436 ACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYS----CIIDTYGRAGRLDEAYKFISEMPI 491
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
KP+ + ++GAC S E+G +MK + + L +Y G +
Sbjct: 492 KPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPG-NTGIHVSLSGIYASLGQWEDVKA 550
Query: 432 LFNFMEDPDV 441
+ M D +
Sbjct: 551 VRKLMRDSRI 560
>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/576 (29%), Positives = 295/576 (51%), Gaps = 80/576 (13%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L+ G +VH + + D+ + + ++ +Y +CG L A+ VFD M +VV +T++++
Sbjct: 109 LRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSA 168
Query: 156 CSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSE--HG 213
++G+ A++ QML+ G+ P++ T SI+ +C C LG Q+HA++IK+ H
Sbjct: 169 FCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSC---CPFVLGEQVHAYMIKAMGLHS 225
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ + +ALI Y++ S+ D A+ VFN +
Sbjct: 226 QSMYASSALIDFYSRN----------------------------SEFDMAKAVFNNLHCK 257
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPLSLYQGMQI 332
N+ +W +++ +A+ +F +M ++ P+ L AC S + G Q+
Sbjct: 258 NVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGACGS---IALGRQL 314
Query: 333 HSYIIKKGFYSNVPVCNAIL---------------------------------QHQAG-- 357
HS IK+ S++ V NA+L Q G
Sbjct: 315 HSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFS 374
Query: 358 -ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
+ L S++ + P+ F+ + +CA +A L+ G Q HC +K G L + N L
Sbjct: 375 EKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNAL 434
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS-SGVRPN 475
+++Y KCG + A+ F+ M+ DV SW+SLI GYAQ G AL++F MRS G P+
Sbjct: 435 INLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPD 494
Query: 476 HVTLVGVLTACSHVGLVEEGLQLYRIM--QNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+ +GVL AC+H G+V EG+ L+R + +++G P+ +CVVD++ R+GR +A
Sbjct: 495 ESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALR 554
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI----DPTNSAALVLLCNIYA 589
+ +M F ++WK+LLASC+ HGN++ G+ AAE ++++ + +SA+ VL+ I+A
Sbjct: 555 LVEEMPFRPGALIWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMSGIHA 614
Query: 590 SSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
G+W + R+ M E GVRK G SW+E+ ++H
Sbjct: 615 MRGEWRDAYRVRRRMDEAGVRKEAGCSWVEVHNEVH 650
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 129/555 (23%), Positives = 248/555 (44%), Gaps = 89/555 (16%)
Query: 110 KCQPDAVLHN-HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
+ +P V+H+ L+ K GSL DA +FD MP++N+V+WT+ ++G ++NG+ AA+
Sbjct: 21 RVEPPEVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAA 80
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ M+ SG+ P+ F F + + AC+ + G Q+H+ +++ ++L+ +Y++
Sbjct: 81 FADMVASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSR 140
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ A VF + MESP++ + ++++
Sbjct: 141 CGDLGAAKGVF----------------------------DRMESPDVVGYTSLVSAFCRS 172
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK--------- 339
A+ +M + + P+ T+ S+L +C P L G Q+H+Y+IK
Sbjct: 173 GEFELAVDTLHQMLRQGVEPNEHTMASILGSCC-PFVL--GEQVHAYMIKAMGLHSQSMY 229
Query: 340 ------GFYSN-------------------VPVCNAILQH----QAGELFRLFSLMLASQ 370
FYS V C+ + H + + ++F M++
Sbjct: 230 ASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEG 289
Query: 371 -TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+P+ F+ +GAC ++A +G QLH +K L D+ V N L+ MY + +
Sbjct: 290 VVEPNEFAFSIALGACGSIA---LGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQEL 346
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+ +E+PD+VSW++ I Q G E+A+ L + S G+ PN L++C+ +
Sbjct: 347 EAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADL 406
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFD----DDIV 545
L+++G Q + + + G + +++L ++ G++ A ++AFD D+
Sbjct: 407 ALLDQGRQ-FHCLALKLGCDLKICTGNALINLYSKCGQIAPA-----KLAFDVMDHRDVT 460
Query: 546 VWKSLLASCKTHGNVDVGKRA---AENILKIDPTNSAALVLL--CNIYASSGKWEEVARL 600
W SL+ HG+ + + +I +P S+ L +L CN + + R
Sbjct: 461 SWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRA 520
Query: 601 MGSMKERGVRKVPGQ 615
+ S + G P
Sbjct: 521 IASHSQHGATPSPSH 535
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 11/246 (4%)
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
+AL FD + + ++ + AC S+ LGR++H + D + N
Sbjct: 276 EDALQVFDDMISEGVVEPNEFAFSIALGACGSI---ALGRQLHSSAIKRNLTSDLRVSNA 332
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+L+MYG+ +++ V ++ ++VSWT I+ QNG AI L + GLMP+
Sbjct: 333 LLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPN 392
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+ F S + +C+ L + GRQ H +K + + NALI +Y+K +I A F
Sbjct: 393 DYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFD 452
Query: 241 SIARKDITSWGSMIDGFSK---LDFARTVFNEMES-----PNLASWNTIIAGVASCSNAN 292
+ +D+TSW S+I G+++ A VF EM S P+ +S+ ++A N
Sbjct: 453 VMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVN 512
Query: 293 EAMSLF 298
E ++LF
Sbjct: 513 EGVALF 518
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 57 QNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV 116
QN ++E +A + ++ ++ +S+C+ L L GR+ H L C
Sbjct: 370 QNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKIC 429
Query: 117 LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ-S 175
N ++N+Y KCG + A++ FD M R+V SW ++I G +Q+G + A++++ +M
Sbjct: 430 TGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIR 489
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQL-HAHVIKSEHGS 214
G PD+ +F ++ AC+ V G L A S+HG+
Sbjct: 490 GTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGA 529
>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 985
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 325/625 (52%), Gaps = 33/625 (5%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDL--FSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
+ C L+ A +V D +R ++ L +S + +Q+ + AF+ N +R
Sbjct: 327 YSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQH----CVYAFNLYTQMENMGLR 382
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
PS T L+ A S L +G +H L D + +LNMY C L A V
Sbjct: 383 PSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESV 442
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F +M +R+ V+W ++I G +N + + L+++M+ G P +TF I+ ACS L
Sbjct: 443 FCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDY 502
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
GR +HA VI L QNAL+ MY A+ +FS + + D+ SW SMI G+
Sbjct: 503 FSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGY 562
Query: 258 ---SKLDFARTVFNEMES---PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
+ A +F ++++ P + AG+ S + A S + + ++I G
Sbjct: 563 FENEDGEKAMNLFVQLKALCFPKPDDYT--YAGIISATGAFPCFS-YGKPLHGQVIKAGF 619
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELF----------R 361
VRS+ T +S+Y Q ++ + ++P +AIL + + R
Sbjct: 620 -VRSVFVGSTL-VSMYFKNQETEAALR--VFCSIPGKDAILWTEMITGYSKMADGMGAIR 675
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV 421
FS M + D + V+ CA +A L G +HCY K G +++ V L+DMY
Sbjct: 676 CFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYA 735
Query: 422 KCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVG 481
K G+L +A +F+ + PD+ W+S++ G++ G ++ALKLF + G+ P+ VT +
Sbjct: 736 KNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLS 795
Query: 482 VLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF- 540
+L+ACSH LVE+G L+ M + G++P + SC+V LL+RA + EAE+ IN+ +
Sbjct: 796 LLSACSHSRLVEQGKLLWNYMSS-IGLVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYV 854
Query: 541 DDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARL 600
+D++ +W++LL++C + N+ VG RAAE +L+ + + L+LL N+YA++G+W+EVA +
Sbjct: 855 EDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTLILLSNLYAAAGRWDEVAEI 914
Query: 601 MGSMKERGVRKVPGQSWIEIQTKIH 625
+MK + K PG SWIE + IH
Sbjct: 915 RRNMKGLIMEKEPGLSWIEAKNDIH 939
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/498 (31%), Positives = 274/498 (55%), Gaps = 67/498 (13%)
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
+AR +FD+MP+ N +SW +++G QNG + A +++ + MP++
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDK------MPER----------- 54
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+++S A+I Y + I +A +F + +++ SW
Sbjct: 55 ----------------------NVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTV 92
Query: 253 MIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
M+ G ++D AR +F+ M ++ + +I G+ S EA +F EM R ++
Sbjct: 93 MLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVV-- 150
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGEL--FRLFSLML 367
A TS +S + S +IK I + + EL LFSLM
Sbjct: 151 ---------AWTSMISGEKDDGTWSTMIK------------IYERKGFELEALALFSLMQ 189
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+P + V+ C ++ASL+ G Q+H ++++ +D++V + L+ MY+KCG L
Sbjct: 190 REGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLV 249
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
+A+ +F+ D+V W+S+I GYAQ G GE+AL++F M SS + P+ +T +GVL+ACS
Sbjct: 250 TAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACS 309
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
+ G V+EGL+++ M+++Y + P E +C+VDLL RAG+++EA + I M + D +VW
Sbjct: 310 YTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVW 369
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL +C+TH N+D+ + AA+ +L+++P N+ +LL N+Y+S +W++V L +M+ +
Sbjct: 370 GALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAK 429
Query: 608 GVRKVPGQSWIEIQTKIH 625
+RK PG SWIE+ K+H
Sbjct: 430 NLRKSPGCSWIEVDKKVH 447
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 48/299 (16%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ-- 171
D V ++++ G L +AR +FDEMPQRNVV+WT+MI+G +G + I++Y +
Sbjct: 117 DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKG 176
Query: 172 -----------MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
M + G+ P + S++ C L + GRQ+H+ +++S+ + +
Sbjct: 177 FELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSS 236
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNT 280
LI MY K ++ A VF + KDI W S+I G+++ F
Sbjct: 237 VLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGF------------------ 278
Query: 281 IIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG 340
+A+ +F +M + PD +T +L AC+ + +G++I + K
Sbjct: 279 ----------GEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESM--KS 326
Query: 341 FYSNVP-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
Y P C L +AG+L +L+ + D I + ++GAC +L++
Sbjct: 327 KYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLA 385
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 168/405 (41%), Gaps = 99/405 (24%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
RK+ D + + + + N +++ Y + G + +AR VFD+MP+RNVVSWTAMI G Q
Sbjct: 13 ARKLFDKM----PETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQ 68
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G A L+ +M + ++ G +I E G
Sbjct: 69 EGLIEEAELLFWRMPERNVVSWTVMLGGLI----------------------EDG----- 101
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFARTVFNEMESPNL 275
R+ +A +F + KD+ + +MIDG +L AR +F+EM N+
Sbjct: 102 ------------RVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNV 149
Query: 276 ASWNTIIAGVASCSNAN-------------EAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
+W ++I+G + EA++LFS M + P +V S+L C S
Sbjct: 150 VAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGS 209
Query: 323 PLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------ 352
SL G Q+HS +++ F ++ V + ++
Sbjct: 210 LASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSI 269
Query: 353 -----QHQAGE-LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
QH GE +F M +S PD ITF V+ AC+ ++ G ++ MK+
Sbjct: 270 IAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIF-ESMKSKY 328
Query: 407 ALDVFVMNG--LMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+D + ++D+ + G L A L M + D + W +L+
Sbjct: 329 QVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 62 EALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
EAL F +Q +RPS + ++S C SL SL GR+VH ++ S+ D + +
Sbjct: 180 EALALFSLMQREG---VRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSS 236
Query: 120 HILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMP 179
++ MY KCG L A+ VFD +++V W ++IAG +Q+G A+E++ M S + P
Sbjct: 237 VLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAP 296
Query: 180 DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN--ALIAMYTKFDRILDAWN 237
D+ TF ++ ACS V G ++ +KS++ +++ ++ + + ++ +A N
Sbjct: 297 DEITFIGVLSACSYTGKVKEGLEIFES-MKSKYQVDPKTEHYACMVDLLGRAGKLNEAMN 355
Query: 238 VFSSI-ARKDITSWGSMI 254
+ ++ D WG+++
Sbjct: 356 LIENMPVEADAIVWGALL 373
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 291/561 (51%), Gaps = 24/561 (4%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
+ ++SACSS L GR +H + + ++ + +++MYG+CGSL DA +F +
Sbjct: 130 VFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHL 189
Query: 142 PQR-NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ +VV W AMI SQNG A+E++ +MLQ G+ PD TF S+ +ACS
Sbjct: 190 ERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS------S 243
Query: 201 RQLHAHVIKSEH--------GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
L A +K H GS ++ AL+ Y + I A F+++ ++ SW S
Sbjct: 244 PSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTS 303
Query: 253 MIDGFSKLD--FARTVFNEMESPNLA-SWNTIIAGVASCSNANEAMSLFSEMGDRELIPD 309
MI F+++ A F+ M + + +T+ A + C + + A + + + + D
Sbjct: 304 MIAAFAQIGHLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAIAQEIGVATD 363
Query: 310 GLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH----QAGELFRLFSL 365
V L+ A +++ S ++G + V I + F+L+
Sbjct: 364 VAIVTDLVMAYARCDGQEDAIRVFS-AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGA 422
Query: 366 MLASQTKPDHITFNDVMGACAAMASLEMGTQLH-CYIMKTGLALDVFVMNGLMDMYVKCG 424
+ PD I + + ACA++A+L G Q+H C L DV + N ++ MY +CG
Sbjct: 423 AIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCG 482
Query: 425 SLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLT 484
SL AR+ F+ M D +SW++++ AQ G E+ LFR M G V + +L+
Sbjct: 483 SLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLS 542
Query: 485 ACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDI 544
AC+H GLVE G + + M ++G++P E C+VDLL R GR+ +A + M D
Sbjct: 543 ACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDA 602
Query: 545 VVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
W +L+ +C+ +G+ + G+ AAE +L++ ++AA V LCNIY+++G+WE+ A + M
Sbjct: 603 ATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIM 662
Query: 605 KERGVRKVPGQSWIEIQTKIH 625
+ G+RK+PG S IEI++K+H
Sbjct: 663 ADLGLRKIPGVSSIEIRSKVH 683
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 216/485 (44%), Gaps = 66/485 (13%)
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D L + ++ MY +CGSLE A VF ++ +++V WT +I+ G AAI L+ ++L
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
Q G+ D F S++ ACS + GR +H +++ G I +AL++MY + +
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 234 DAWNVFSSIARK-DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
DA +F + R D+ W +MI T ++ SP
Sbjct: 181 DANALFGHLERHLDVVLWNAMI----------TANSQNGSP------------------R 212
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY--QGMQIHSYIIKKGFYSNVPVCNA 350
EA+ +F M + PD +T S+ AC+S SL Q H+ + + G S+V V A
Sbjct: 213 EALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATA 272
Query: 351 ILQHQA--GEL--FRLF------------SLMLASQTKPDHI----TFNDVM------GA 384
++ A GE+ R F + M+A+ + H+ TF+ ++
Sbjct: 273 LVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLLAVETFHAMLLEGVVPTR 332
Query: 385 CAAMASLEMGTQLHCYIM------KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED 438
A+LE LH + + G+A DV ++ L+ Y +C A +F+ E+
Sbjct: 333 STLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREE 392
Query: 439 P--DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
D +++I YAQ KL+ G+ P+ + + L AC+ + + EG
Sbjct: 393 GEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGR 452
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
Q++ + + + + +V + + G + +A D + M D+I W ++L++
Sbjct: 453 QIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEI-SWNAMLSASAQ 511
Query: 557 HGNVD 561
HG V+
Sbjct: 512 HGRVE 516
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/550 (33%), Positives = 277/550 (50%), Gaps = 61/550 (11%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
Q DAV + +L Y + G +E+A+ +FDEMP RN SW MI G GQ A+ ++
Sbjct: 129 QRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRKALNVFAA 188
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVG--------LGRQLHAHVIKSEHGSHLISQNALI 223
M PD+ + S+ SG G L ++L + G+ N LI
Sbjct: 189 M------PDKDS-ASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAF----NTLI 237
Query: 224 AMYTKFDRILDAWNVFSSIAR--------------KDITSWGSMIDGFSKLD---FARTV 266
A Y + R+ DA +FS I + +++ SW SM+ + + AR +
Sbjct: 238 AAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARAL 297
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F+EM +L SWNT+IAG S EA LF E+ D PD +T ++ T
Sbjct: 298 FDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPD----PDAVTWNLMIRGFTQ---- 349
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAIL----------QHQAGELFRLFSLMLASQTKPDHI 376
+G H+ +GF+ +P + I +LF ML +PDH
Sbjct: 350 -KGDVEHA----RGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHH 404
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T + V+ ACA++A L +G QLH I K+ L D N LM MY +CG L SA+ +F M
Sbjct: 405 TLSSVLAACASLAMLRLGAQLHQLIEKSFLP-DTATNNALMTMYSRCGELISAKAIFGHM 463
Query: 437 E-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
D+VSW++LI GY Q G EAL+LF MRS+ V P H+T + +L+AC + GLV EG
Sbjct: 464 HTQRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAGLVSEG 523
Query: 496 LQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCK 555
++ M ++YG+ + E + +V+L+ R G++ +A + I M D VW + L +C
Sbjct: 524 RVVFHTMVHDYGLAASVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAVWGAFLGACT 583
Query: 556 THGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQ 615
N + + AA + KIDP +SA VL+ N++A G+W + + M+ G+ K PG
Sbjct: 584 AKKNEPLAEMAANALSKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLGIHKHPGY 643
Query: 616 SWIEIQTKIH 625
SWI++ K+H
Sbjct: 644 SWIDLHDKVH 653
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 79 RPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
RP T + +++AC+SL L+LG ++H ++ PD +N ++ MY +CG L A+
Sbjct: 400 RPDHHTLSSVLAACASLAMLRLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELISAKA 458
Query: 137 VFDEM-PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+F M QR++VSW A+I G Q G A+ L+ +M + +MP TF S++ AC
Sbjct: 459 IFGHMHTQRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAG 518
Query: 196 CVGLGRQLHAHVIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGS 252
V GR + H + ++G + + AL+ + + ++ DA + S+ D WG+
Sbjct: 519 LVSEGRVVF-HTMVHDYGLAASVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAVWGA 577
Query: 253 MI 254
+
Sbjct: 578 FL 579
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 167/419 (39%), Gaps = 52/419 (12%)
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK------LDFARTVFNE 269
+++ N+L+A ++ + A F ++ +DI SW +++ +++ L AR +F E
Sbjct: 67 VVTWNSLLAALSRGSDVRAARCFFDAMPVRDIISWNTLLSAYARSLQPNDLAAARRLFYE 126
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
M + SW+T++ EA LF EM R + + +++ + + +
Sbjct: 127 MPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPHR----NASSWNTMITGFFAVGQMRKA 182
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQ----HQAGELF--RLFSLMLASQTKPDHITFNDVMG 383
+ + + + K S + + ++ H+A +L RL + + FN ++
Sbjct: 183 LNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVG----AFNTLIA 238
Query: 384 ACAAMASLEMGTQLHCYIMKTG----------LALDVFVMNGLMDMYVKCGSLGSARELF 433
A + +L I KT +V N +M Y++ G + SAR LF
Sbjct: 239 AYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALF 298
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ M D+VSW+++I GY Q EEA KLF + P+ VT ++ + G VE
Sbjct: 299 DEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPD----PDAVTWNLMIRGFTQKGDVE 354
Query: 494 EGLQLYRIMQNEYGII--------PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIV 545
+ M I E + L R V E D
Sbjct: 355 HARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHH---------- 404
Query: 546 VWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSM 604
S+LA+C + + +G + + I K ++A L +Y+ G+ + G M
Sbjct: 405 TLSSVLAACASLAMLRLGAQLHQLIEKSFLPDTATNNALMTMYSRCGELISAKAIFGHM 463
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/649 (28%), Positives = 314/649 (48%), Gaps = 79/649 (12%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D+A + D R W+ + ++L +A FD + + +F ++ ++
Sbjct: 65 IDEARALFDGMPSRNAVSWN-AMIAALSDHGRVADARGLFDRMPSRDDF-----SWTVMV 118
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S + L+L R V D + KC +N +++ Y K G +DA + EMP ++
Sbjct: 119 SCYARAGELELARDVLDRMPGDKC---TACYNAMISGYAKNGRFDDAVKLLREMPAPDLF 175
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
SW + +AG +Q+GQ A++ + +M++ ++ +RA A
Sbjct: 176 SWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGD--------LDAAASF 227
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF---SKLDFAR 264
+++S L+ Y + RI DA ++F + +++ + M+DG+ S+L+ A
Sbjct: 228 FGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEAC 287
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG---------------------D 303
+F+EM N SW TII+G+A EA L +M D
Sbjct: 288 KLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVND 347
Query: 304 RELIPDGLTVRSLLCACT------------SPLSLYQGM----------QIHSY------ 335
I DG+ V +C T + L+Q M I Y
Sbjct: 348 ARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQM 407
Query: 336 -----IIKKGFYSNVPVCNAILQH--QAG---ELFRLFSLMLASQTKPDHITFNDVMGAC 385
I ++ N N+++ Q G + F F LM + D T+ + AC
Sbjct: 408 RKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRAC 467
Query: 386 AAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWS 445
A +A+L +G QLH ++++G D+F N L+ Y KCG + A+++F+ M D+VSW+
Sbjct: 468 ANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWN 527
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNE 505
+L+ GYA G G EA+ +FR M ++GVRP+ VT VG+L+ACS GL++EGL + M E
Sbjct: 528 ALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEE 587
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
Y + P E +C+ DLL RAG+++EA + + M + VW +LL +C+ + N ++ +
Sbjct: 588 YSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARL 647
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
AAE + +++P ++ VLL NI A +GKW+E + S+KE+G K PG
Sbjct: 648 AAEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPPG 696
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 217/534 (40%), Gaps = 115/534 (21%)
Query: 105 HILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ S + + V +N +L+ + G +++AR +FD MP RN VSW AMIA S +G+
Sbjct: 39 RLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRVAD 98
Query: 165 AIELYVQMLQSGLMPDQFTF------------------------GSIIRACSGLCCVGLG 200
A L+ +M D F++ G AC G
Sbjct: 99 ARGLFDRMPSR----DDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYA 154
Query: 201 RQLH----AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ +++ L S N+ +A T+ +++ A F + KD+ SW M++G
Sbjct: 155 KNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEG 214
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
F + LD A + F +ESPN+ SW T++ G ++A LF M +R ++
Sbjct: 215 FVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVV------ 268
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-------QAGELFRLFSLM 366
AC L Y + K + +P N+I +AG+L L+
Sbjct: 269 -----ACNVMLDGYVRLSRLEEACK--LFDEMPGKNSISWTTIISGLARAGKLQEAKDLL 321
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT----------GLAL-DVFVMNG 415
D ++FN V A M H Y+ + G+ + D N
Sbjct: 322 -------DKMSFNCVAAKTALM---------HGYLQRNMVNDARQIFDGMEVHDTVCWNT 365
Query: 416 LMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR--------- 466
++ YV+ G L A LF M + D VSW+++I GYAQ G +A+ +FRR
Sbjct: 366 MISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSW 425
Query: 467 ----------------------MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN 504
MR R + T L AC+++ + G QL+ ++
Sbjct: 426 NSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVR 485
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
G I R+ ++ A+ GR+ EA+ ++M DIV W +L+ ++G
Sbjct: 486 S-GHINDLFARNALISTYAKCGRMLEAKQIFDEMV-GKDIVSWNALVDGYASNG 537
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
VF N + + G L +AR LF+ M + V+++S++ A+ G +EA LF M S
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS--CVVDLLARAGR 527
N V+ ++ A S G V + L+ M P+R+ S +V ARAG
Sbjct: 78 R----NAVSWNAMIAALSDHGRVADARGLFDRM-------PSRDDFSWTVMVSCYARAGE 126
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ A D +++M D + ++++ +G D
Sbjct: 127 LELARDVLDRMPGDKCTACYNAMISGYAKNGRFD 160
>gi|2191182|gb|AAB61067.1| similar to N. tabacum membrane-associated salt-inducible protein
(PID:g473874) [Arabidopsis thaliana]
Length = 597
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/591 (30%), Positives = 294/591 (49%), Gaps = 53/591 (8%)
Query: 59 LYNEALVAFDFL-----QNNTNFRIRPSTYADLISACS-SLRSLQLGRKVHDHILSSKCQ 112
LYN A A D + + + S L+ C+ S +SL+ + VH IL+ +
Sbjct: 4 LYNLAKAATDHISISHDKKKCELEMESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLR 63
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV---------SWTAMIAGCSQNGQEN 163
D VL ++N+Y C AR VF+ R+ V SW +I+ Q+G+
Sbjct: 64 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSASWNTVISCFYQSGEAE 123
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A+EL+ +M SG P+ + I ACS L + G+++H +K +AL+
Sbjct: 124 KALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALV 183
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
MY K D L+ AR VF +M +L +WN++I
Sbjct: 184 DMYGKCD----------------------------CLEVAREVFQKMPRKSLVAWNSMIK 215
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G + ++ + + + M P T+ S+L AC+ +L G IH+ + + F
Sbjct: 216 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHANLAETVFSK 275
Query: 344 ---------NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
NV + + I + ++ M++ KPD +TF V+ AC+ +A+LE G
Sbjct: 276 TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKG 335
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
Q+H I ++ L D +++ L+DMY KCG+ A +FN + DVVSW+ +I Y
Sbjct: 336 KQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSH 395
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G EAL F M+ G++P+ VTL+ VL+AC H GL++EGL+ + M+++YGI P E
Sbjct: 396 GQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEH 455
Query: 515 RSCVVDLLARAGRVHEAEDFINQMA-FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
SC++D+L RAGR+ EA + I Q D+ + +L ++C H +G R A +++
Sbjct: 456 YSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVEN 515
Query: 574 DPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
P +++ ++L N+YAS W+ R+ MKE G+RK PG SWIE+ K+
Sbjct: 516 YPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKV 566
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 270/540 (50%), Gaps = 63/540 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
TY L+ AC+ + ++ VH +L D + N +++ Y L AR VFDEM
Sbjct: 798 TYPFLLKACARISNVSCT-TVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEM 856
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
+R++VSW ++I G + + + + ++ +M + + D T ++ AC+ L G+
Sbjct: 857 SERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVD 916
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+ ++ +++ + N LI MY + S +D
Sbjct: 917 AMIEYIEENKVEVDVYLGNTLIDMYGRR----------------------------SMVD 948
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR VF+ M N+ SWN +I G N A LF +M R++I + T
Sbjct: 949 LARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVI-----------SWT 997
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDV 381
S +S Y Q G+ RLF M+ ++ KPD IT V
Sbjct: 998 SMISSYSQAG-----------------------QFGKAVRLFQEMMVTKVKPDEITVASV 1034
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ ACA + +L++G +H YI K + D++V N L+DMY KCG++ +F M D
Sbjct: 1035 LSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDS 1094
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
VSW+S+I G A G + AL LF M GVRP H T VGVL AC+H G+V++GL+ +
Sbjct: 1095 VSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFES 1154
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
M+ YG+ P + CVVDLL+R+G + A +FI +M D D+VVW+ LL++ + HGN+
Sbjct: 1155 MERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLH 1214
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
+ + A + +L+ DP+NS +L N YA S +WE+V ++ M+E V K S +EI
Sbjct: 1215 LAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIN 1274
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 281/546 (51%), Gaps = 44/546 (8%)
Query: 86 LISACSSLRSLQLGRKVHDHIL-SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+I C +L+SL + +H +L S + N +L +Y + G+ + A VFDE+ Q
Sbjct: 8 IIHNCKTLKSL---KSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
N WT++I G +N Q + A L++QM + + FT S+++A + L G+ ++
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LD 261
++S N +I+ Y DR+ A F + +++ SW SMI G+ K +
Sbjct: 125 GFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMA 184
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSN-ANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
A+ +F+ M +LASWN +++G + N A LF +M + L+ +
Sbjct: 185 EAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMI------- 237
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFND 380
G+ N A+ ELF F KPD
Sbjct: 238 ------------------GGYARNGQPLKAL------ELFERFK---EQDIKPDETFILG 270
Query: 381 VMGACAAMASLEMGTQL-HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
++ AC+ + ++ + H Y+ + L+ D+ V L+DMY KCGS+ A ++F
Sbjct: 271 IISACSQLGIIDAAESIIHNYVGPSLLS-DLRVFTSLIDMYAKCGSIEKALQMFEMAHPK 329
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D++ +S++I A G G +A+ LF +M+ + ++P+ VT +GVLTAC+H GLV+EG + +
Sbjct: 330 DLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYF 389
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ M E+GI P+ + +CVVDLL R G + EA + I M VVW +LLA+C+ H N
Sbjct: 390 KQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCN 449
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
V + + AA + KI+P NS +LL NIYA++G+W VA++ ++E VRK G SWIE
Sbjct: 450 VQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIE 509
Query: 620 IQTKIH 625
+ +H
Sbjct: 510 LSHVVH 515
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 184/497 (37%), Gaps = 97/497 (19%)
Query: 29 DQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
D A +V D + +W L + Y+EA F ++ + T + ++
Sbjct: 52 DYAHKVFDEITQPNAYLWT-SLIHGYVENRQYDEAFSLFIQMRREP-ISVLNFTISSVLK 109
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
A + L + G+ V+ C+ D V N +++ YG ++ AR FD MP+RNVVS
Sbjct: 110 ALARLTRFKGGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVS 169
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
WT+MI G + G A L+ MP +
Sbjct: 170 WTSMICGYVKAGDMAEAQVLFDS------MPVK--------------------------- 196
Query: 209 KSEHGSHLISQNALIAMYTKF-DRILDAWNVFSSIARKDITSWGSMIDGFSKLD---FAR 264
L S N +++ Y D A +F + K++ +W +MI G+++ A
Sbjct: 197 ------DLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKAL 250
Query: 265 TVFNEMESPNLASWNTIIAGVAS-CSN---ANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+F + ++ T I G+ S CS + A S+ L+ D SL+
Sbjct: 251 ELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMY 310
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-ELFRLFSLMLASQTKPDHITFN 379
S+ + +Q+ K + A+ H G + LF M + KPD +TF
Sbjct: 311 AKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFL 370
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED- 438
V+ AC GL+D R+ F M +
Sbjct: 371 GVLTACNH--------------------------GGLVD---------EGRKYFKQMTEE 395
Query: 439 ----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS---HVGL 491
P ++ ++ + GC EEA L R M + P+ V +L AC +V L
Sbjct: 396 FGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNM---PIAPHSVVWGALLAACRVHCNVQL 452
Query: 492 VE-EGLQLYRIMQNEYG 507
E +L++I + G
Sbjct: 453 AEVAAAELFKIEPDNSG 469
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 282/551 (51%), Gaps = 23/551 (4%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ CS+L S+ ++H +L + D + ++ + C L A VF+ +P NV
Sbjct: 28 LHKCSNLDSVN---QIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNV 84
Query: 147 VSWTAMIAGCSQN-GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
+ ++I + N + + QM ++GL PD FT+ +++AC+G + L R +HA
Sbjct: 85 HLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHA 144
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRI-LD-AWNVFSSIARKDITSWGSMIDGF---SKL 260
HV K + N+LI Y++ LD A ++F ++ +D+ +W SMI G +L
Sbjct: 145 HVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGEL 204
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ A +F+EM ++ SWNT++ G A + A LF M R ++ + +++C
Sbjct: 205 EGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIV----SWSTMVCG- 259
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELF-----RLFSLMLASQTKPDH 375
S M + + + NV + I+ A + F L+ M + +PD
Sbjct: 260 ---YSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDD 316
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN- 434
++ ACA L +G ++H + + V+N +DMY KCG L +A ++F+
Sbjct: 317 GFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSG 376
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
M DVVSW+S+I G+A G GE+AL+LF RM G P+ T VG+L AC+H GLV E
Sbjct: 377 MMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNE 436
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G + + M+ YGI+P E C++DLL R G + EA + M + + ++ +LL +C
Sbjct: 437 GRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNAC 496
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H +VD + E + K++PT+ LL NIYA +G W VA + M G +K G
Sbjct: 497 RMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSG 556
Query: 615 QSWIEIQTKIH 625
S IE++ ++H
Sbjct: 557 ASSIEVEEEVH 567
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 212/488 (43%), Gaps = 75/488 (15%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
AF LC L A V + + L++S+ + + +N + + F N F+++
Sbjct: 62 AFSLCRHLASAVNVFNHVPHP-----NVHLYNSIIRAHAHNTSHPSLPF---NAFFQMQK 113
Query: 81 S-------TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGS--L 131
+ TY L+ AC+ SL L R +H H+ D + N +++ Y +CGS L
Sbjct: 114 NGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGL 173
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ A +F M +R+VV+W +MI G + G+ A +L+ + MP++
Sbjct: 174 DGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDE------MPER---------- 217
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
++S N ++ Y K + A+ +F + +++I SW
Sbjct: 218 -----------------------DMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWS 254
Query: 252 SMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP 308
+M+ G+SK +D AR +F+ + N+ W TIIAG A EA L+ +M + L P
Sbjct: 255 TMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRP 314
Query: 309 DGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG-----ELFRLF 363
D + S+L AC L G +IH+ + + F V NA + A F +F
Sbjct: 315 DDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVF 374
Query: 364 SLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKC 423
S M+A K D +++N ++ A E +L ++ G D + GL+
Sbjct: 375 SGMMA---KKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHA 431
Query: 424 GSLGSARELFNFMED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
G + R+ F ME P V + ++ + G +EA L R M + PN +
Sbjct: 432 GLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMP---MEPNAII 488
Query: 479 LVGVLTAC 486
L +L AC
Sbjct: 489 LGTLLNAC 496
>gi|226505108|ref|NP_001141927.1| uncharacterized protein LOC100274076 [Zea mays]
gi|194706472|gb|ACF87320.1| unknown [Zea mays]
gi|413938142|gb|AFW72693.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 583
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 279/562 (49%), Gaps = 65/562 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ AC+ LR + GR VH L++ DA + N I++MY +C + A VF +
Sbjct: 40 TFTFAAKACAGLRLRRHGRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVAL 99
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P R VSW +I GC ++G+ A+E++ M+ G+ D+ + S++ AC+ + GR
Sbjct: 100 PSRTTVSWNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGR 159
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR-KDITSWGSMIDGFSKL 260
+H + G ++ +NALI MY K + DA VF + KD+ SW MI +
Sbjct: 160 AVHRLAVVRGLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAY--- 216
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCA 319
V N+ +A++A +L SEM E P+ +T+ LL A
Sbjct: 217 -----VLND--------------------HASKAFALGSEMLVSSEAQPNAVTMAHLLSA 251
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------- 352
C S LS H+ I+ G S++ V A++
Sbjct: 252 CASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVIDMVVEKGSRRTETWN 311
Query: 353 --------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
+ Q + LF MLA +PD T V+ A A A L +HC ++
Sbjct: 312 AAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVR 371
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + + GL+D+Y K G LG A ELF + + DVV+W+++I GY G + A+ L+
Sbjct: 372 GCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLY 431
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
RM GV PN VT+ +L +CSH G+V+EGL+L+ M +G++P E C+VD+L R
Sbjct: 432 SRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGLMPNAEHYLCLVDMLGR 491
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AGR+ EA I M F+ + VW SLL +C H NV+ G+ AA+++ +++P N VLL
Sbjct: 492 AGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLFELEPDNVGNYVLL 551
Query: 585 CNIYASSGKWEEVARLMGSMKE 606
+YA++ +W +V L M+E
Sbjct: 552 GKVYAAAERWSDVQHLRRVMEE 573
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 212/504 (42%), Gaps = 75/504 (14%)
Query: 141 MPQRNVVSWT-AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
MPQ VS + ++ S G A+ LY QM D TF +AC+GL
Sbjct: 1 MPQPASVSVSNTLLRSYSGLGFHRQALALYSQMRHF----DHLTFTFAAKACAGLRLRRH 56
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR +H + + GS QNA+++MY + +D+ +
Sbjct: 57 GRAVHGRALAAGFGSDAYVQNAIVSMYMRC---------------RDVAA---------- 91
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
A VF + S SWNT+I G A A+ +F M DR + D +V S+L A
Sbjct: 92 ---AEAVFVALPSRTTVSWNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPA 148
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA----------------------------- 350
C L+ G +H + +G V V NA
Sbjct: 149 CAQARDLHTGRAVHRLAVVRGLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVS 208
Query: 351 --------ILQHQAGELFRLFSLML-ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
+L A + F L S ML +S+ +P+ +T ++ ACA++ S + H
Sbjct: 209 WTVMIGAYVLNDHASKAFALGSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALC 268
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ GL D+ V L+D Y KCG +G ++ +W++ I GY Q G++AL
Sbjct: 269 IRLGLGSDIVVETALVDCYAKCGYMGVI-DMVVEKGSRRTETWNAAISGYTQRDQGKKAL 327
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
LF+RM + VRP+ T+ V+ A + + + ++ + G + + + + ++DL
Sbjct: 328 ALFKRMLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVR-GCLVSTDIATGLIDL 386
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP-TNSAA 580
A+AG + A + Q + D+V W +++A HG+ ++++ N+
Sbjct: 387 YAKAGDLGVAWELF-QCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVT 445
Query: 581 LVLLCNIYASSGKWEEVARLMGSM 604
+ L + + +G +E RL M
Sbjct: 446 IASLLHSCSHAGMVDEGLRLFNDM 469
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 113/243 (46%), Gaps = 17/243 (6%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C + VV+ RR + W+ + S +++ +AL F + + +R
Sbjct: 285 DCYAKCGYMGVIDMVVEKGSRR-TETWNAAI-SGYTQRDQGKKALALFKRMLAES---VR 339
Query: 80 P--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P +T A +I A + L +H +L C + ++++Y K G L A +
Sbjct: 340 PDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWEL 399
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
F +P+++VV+WT +IAG +G A+ LY +M++ G+MP+ T S++ +CS V
Sbjct: 400 FQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMV 459
Query: 198 GLGRQLHAHVIKSEHGSHLISQNA-----LIAMYTKFDRILDAWNVFSSIA-RKDITSWG 251
G +L HG H + NA L+ M + RI +A+ + ++ W
Sbjct: 460 DEGLRL----FNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWS 515
Query: 252 SMI 254
S++
Sbjct: 516 SLL 518
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/490 (33%), Positives = 252/490 (51%), Gaps = 40/490 (8%)
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
A +F ++PQ + W I G SQ+ A+ LY QM + PD FTF +++AC+
Sbjct: 60 AVQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTK 119
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
L V G +H V + GS+++ +N L+ + K + A ++F + D+ +W ++
Sbjct: 120 LFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSAL 179
Query: 254 IDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
I G+++ L AR +F+EM +L SWN +I A LF E ++++
Sbjct: 180 IAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVS-- 237
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQ 370
N V +L + E LF M
Sbjct: 238 --------------------------------WNAMVGGYVLHNLNQEALELFDEMCEVG 265
Query: 371 TKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA-LDVFVMNGLMDMYVKCGSLGSA 429
PD +T ++ ACA + + G ++H IM+ L + N L+DMY KCG++G
Sbjct: 266 ECPDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGKLSTLLGNALVDMYAKCGNIGKG 323
Query: 430 RELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHV 489
+F + D D+VSW+S+I G A G EE+L LFR M+ + V P+ +T VGVL ACSH
Sbjct: 324 VCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEITFVGVLAACSHT 383
Query: 490 GLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
G V+EG + + +M+N+Y I P CVVD+LARAG + EA DFI M + + +VW+S
Sbjct: 384 GNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIASMKIEPNAIVWRS 443
Query: 550 LLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
LL +CK HG+V++ KRA E +L++ S VLL N+YAS G+W+ + M + GV
Sbjct: 444 LLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWDGAENVRKLMDDNGV 503
Query: 610 RKVPGQSWIE 619
K G S++E
Sbjct: 504 TKTRGSSFVE 513
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 194/435 (44%), Gaps = 66/435 (15%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
++ LI+ + L + RK+ D + + D V N ++ Y K G +E AR +FDE P
Sbjct: 176 WSALIAGYAQRGDLSVARKLFDEM----PKRDLVSWNVMITAYTKHGEMECARRLFDEAP 231
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQ 202
++VVSW AM+ G + A+EL+ +M + G PD+ T S++ AC+ L G +
Sbjct: 232 MKDVVSWNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEK 289
Query: 203 LHAHVIKSEHGS-HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
+HA +++ G + NAL+ MY K I VF I KD+ S
Sbjct: 290 VHAKIMELNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVS------------ 337
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
WN++I G+A +A E++ LF EM ++ PD +T +L AC+
Sbjct: 338 ----------------WNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEITFVGVLAACS 381
Query: 322 SPLSLYQGMQIHSYIIKKGFY--SNVPVCNAILQ--HQAGELFRLFSLMLASQTKPDHIT 377
++ +G + + Y++K + N+ C ++ +AG L F + + + +P+ I
Sbjct: 382 HTGNVDEGNR-YFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIASMKIEPNAIV 440
Query: 378 FNDVMGACAAMASLEMGTQL--HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+ ++GAC +E+ + M+ + D +++ ++Y G A +
Sbjct: 441 WRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLS---NVYASHGEWDGAENVRKL 497
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
M+D V G ++ +R + PN V +L AC G VE
Sbjct: 498 MDDNGVTKTR-----------GSSFVEAYR------IEPNPVNGRTLLGACIVYGDVELA 540
Query: 496 L----QLYRIMQNEY 506
+L R+ ++E+
Sbjct: 541 KRVNEELLRLRRDEW 555
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 221/519 (42%), Gaps = 86/519 (16%)
Query: 74 TNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
T+ ++P T+ ++ AC+ L + G VH + + V+ N +L + KCG L
Sbjct: 99 THRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDL 158
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
+ A +FD+ + +VV+W+A+IAG +Q G + A +L+ +M +
Sbjct: 159 KVANDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPK----------------- 201
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
L+S N +I YTK + A +F KD+ SW
Sbjct: 202 ----------------------RDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWN 239
Query: 252 SMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIAGVASCSNANEAM-SLFSEMGD 303
+M+ G+ + A +F+EM E P+ + ++++ A + E + + E+
Sbjct: 240 AMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLGDXGEKVHAKIMELNK 299
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH-QAGELFRL 362
+L L +L+ ++ +G+ + I K S V + H A E L
Sbjct: 300 GKL--STLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGL 357
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMN--GLMDMY 420
F M ++ PD ITF V+ AC+ +++ G + + Y+MK ++ + + ++DM
Sbjct: 358 FREMQRTKVCPDEITFVGVLAACSHTGNVDEGNR-YFYLMKNKYKIEPNIRHCGCVVDML 416
Query: 421 VKCGSLGSARELFNFME-DPDVVSWSSLIVG---YAQFGCGEEALKLFRRMR--SSGVRP 474
+ G L A + M+ +P+ + W SL+ + + A + RMR SG
Sbjct: 417 ARAGLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSG--- 473
Query: 475 NHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
++V L V + +G + R + ++ G+ TR F
Sbjct: 474 DYVLLSNVYASHGE----WDGAENVRKLMDDNGVTKTR------------------GSSF 511
Query: 535 INQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKI 573
+ + + V ++LL +C +G+V++ KR E +L++
Sbjct: 512 VEAYRIEPNPVNGRTLLGACIVYGDVELAKRVNEELLRL 550
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 285/532 (53%), Gaps = 49/532 (9%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
+++AR VFD++ +V +T MI G ++N + + A++L+ +M + D ++ S+I+
Sbjct: 27 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMP----VKDVVSWNSMIKG 82
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C + + R+L + + ++S +I + +F +I A +F + +DI +W
Sbjct: 83 CFDCADLTMARKLFDEMPERS----VVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAW 138
Query: 251 GSMIDGF---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRE 305
SMI G+ +++ +F EM N+ SW ++I G+ + EA+ LF +M E
Sbjct: 139 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 198
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKG-------------FYSNVPVCNAIL 352
+ P T ++ AC + +LYQG+QIH+++ K G FY+N L
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258
Query: 353 QHQAGEL-----------------------FRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+ G+L ++F M+ P+ +F + +C +
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 318
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+L+ G ++H +K GL DVFV N L+ MY +CG+L +F + ++VSW+S+IV
Sbjct: 319 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIV 378
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
G AQ GCG AL F +M S V P+ +T G+L+ACSH G+ ++G L++
Sbjct: 379 GCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAE 438
Query: 510 PTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAEN 569
+ +C+VD+L R+G++ EAE+ I M + +VW LL++C H ++V +RAA+
Sbjct: 439 VKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKC 498
Query: 570 ILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQ 621
I+ ++P S+A VLL N+YAS+ +W +V+R+ MK+RG+ K PG+SWI I+
Sbjct: 499 IIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIK 550
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 149/329 (45%), Gaps = 43/329 (13%)
Query: 78 IRP--STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
++P STY +I+AC++ +L G ++H H+ DA + ++ Y C +ED+
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
VF NVV WTA++ G N + A++++ +M++ G++P+Q +F S + +C GL
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 318
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+ GR++H +K + + N+LI MY + + D +F I++K+I S
Sbjct: 319 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVS------ 372
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
WN++I G A A++ F++M + PD +T
Sbjct: 373 ----------------------WNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTG 410
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGFYSNVP--------VCNAILQHQAGELFRLFSLML 367
LL AC+ + GM + K F N C + ++G+L L+
Sbjct: 411 LLSACS-----HSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIR 465
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQ 396
K + + + ++ AC + LE+ +
Sbjct: 466 NMPVKANSMVWLVLLSACTMHSKLEVAER 494
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 17/209 (8%)
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRS 469
F ++ +++ + AR +F+ + PDV ++ +I GYA+ + AL+LF M
Sbjct: 11 TFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV 70
Query: 470 SGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS--CVVDLLARAGR 527
V V+ ++ C + +L+ M P R S +++ + G+
Sbjct: 71 KDV----VSWNSMIKGCFDCADLTMARKLFDEM-------PERSVVSWTTMINGFLQFGK 119
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNI 587
+ AE +M F DI W S++ +G V+ G R + ++ N + +
Sbjct: 120 IEVAEGLFYKMPF-RDIAAWNSMIYGYCCNGRVEDGLRLFQ---EMPCRNVISWTSMIGG 175
Query: 588 YASSGKWEEVARLMGSMKERGVRKVPGQS 616
G+ EE L M GV P S
Sbjct: 176 LDQHGRSEEALGLFRQMMGCGVEVKPTSS 204
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/567 (29%), Positives = 307/567 (54%), Gaps = 24/567 (4%)
Query: 78 IRPSTYADLISA---CSSLRSLQLGRKVHDH-ILSSKCQPDAVLH-NHILNMYGKCGSLE 132
+ PS+ DLI + ++L++G+ +H H I++S+ ++++ N ++N Y K +
Sbjct: 24 VSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVS 83
Query: 133 DARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG-LMPDQFTFGSIIRAC 191
A +FD MP+RNVVSW+A++ G NG I L M+ G + P+++ I +C
Sbjct: 84 IAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSC 143
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
V GRQ H ++K+ H +NAL++MY+K + DA V++ + DI ++
Sbjct: 144 CDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYN 203
Query: 252 SMIDGFSKLDFART---VFNEMESPNLASWN--TIIAGVASCSNANEAMSLFSEMGDREL 306
S++ + + R V M S ++ W+ T + + C++ + + L + + L
Sbjct: 204 SILSSLVENGYLREGLEVLRSMVSESV-KWDKVTFVNAFSLCASLKD-LRLGLHVHGKML 261
Query: 307 IPDGLTVRSLLCACTSPLSLYQ--GMQIHSYIIKKGFYS-NVPVCNAILQH--QAG---E 358
D V ++ +++Y G + + + G S NV + A++ Q G E
Sbjct: 262 TSD---VECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEE 318
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
LFS M K + T+ ++ ACA +++ G+ LH + K+G V V N L++
Sbjct: 319 ALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALIN 378
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY K G + +A+++F+ M D+++W+++I G++ G G++AL +F+ M ++ PN+VT
Sbjct: 379 MYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVT 438
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
GVL+AC H+GLV+EG + ++G+ P E +C+V LL++ G+++EA +F+
Sbjct: 439 FTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTA 498
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVA 598
D+V W++LL +C H N +G+ AE +L++DP + LL NIYA +W+ V
Sbjct: 499 PVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVV 558
Query: 599 RLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ M+++ ++K PG SWIEI H
Sbjct: 559 KVRKLMRDKKIKKEPGVSWIEIGNVTH 585
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 127/248 (51%), Gaps = 13/248 (5%)
Query: 20 DAFELCMLLDQAGEVVDSFLRR--FDDIWDFD--LFSSL---CKQN-LYNEALVAFDFLQ 71
DA+ +++ G+ S + R FD + + L++++ C QN + EAL F ++
Sbjct: 268 DAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKME 327
Query: 72 NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
N + TYA L++AC+ L + + G +H H S + ++ N ++NMY K G +
Sbjct: 328 QE-NVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDI 386
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
E A+ VF +M R++++W AMI G S +G A+ ++ ML + P+ TF ++ AC
Sbjct: 387 EAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSAC 446
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSH--LISQNALIAMYTKFDRILDAWNVFSSIARK-DIT 248
L V G H++K + G L ++++ +K ++ +A N + K D+
Sbjct: 447 GHLGLVQEGFYYLHHLMK-QFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVV 505
Query: 249 SWGSMIDG 256
+W ++++
Sbjct: 506 AWRTLLNA 513
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 271/545 (49%), Gaps = 74/545 (13%)
Query: 124 MYGKCGSLEDARMVF-DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
MY KC + A +F D + NV ++ A+I+G NG E Y +M G+MPD+F
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
TF I+AC + + +++H + K + +AL+ Y KF
Sbjct: 61 TFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKF------------- 104
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
++ A+ F E+ ++ WN ++ G A + F M
Sbjct: 105 ---------------GLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMN 149
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------H 354
D ++P TV +L L G IH + +K G+ S V V N+++
Sbjct: 150 DESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIE 209
Query: 355 QAGELF----------------------------RLFSLMLASQTKPDHITFNDVMGACA 386
A E+F RL ML + +PD +T V+ AC+
Sbjct: 210 DALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 269
Query: 387 AMASLEMGTQLHCYIMKTGLALD------VFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
+A+L G ++H Y++ +GL D V + N ++DMY KCGS+ A +F M + D
Sbjct: 270 HLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKD 329
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
V SW+ +I+GY G G EAL++F RM ++P+ VT VGVL+ACSH G V +G
Sbjct: 330 VASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLA 389
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
M+++Y + PT E +CV+D+L RAG++ EA + M + + VVW++LLA+C+ H +
Sbjct: 390 QMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA 449
Query: 561 DVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
+ + AA+ + +++P + + VL+ N+Y + G++EEV + +M+++ VRK PG SWIE+
Sbjct: 450 VLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIEL 509
Query: 621 QTKIH 625
+ +H
Sbjct: 510 KNGVH 514
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 179/429 (41%), Gaps = 77/429 (17%)
Query: 66 AFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
F+F Q N + P T+ I AC L L++ +K+H + + D + + ++N
Sbjct: 43 GFEFYQKMRNEGVMPDKFTFPCAIKAC--LDVLEI-KKIHGLLFKFGLELDVFIGSALVN 99
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
Y K G +E A++ F+E+P R+VV W AM+ G +Q GQ +E + +M ++P +FT
Sbjct: 100 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 159
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
I+ + + + GR +H +K + S + N+LI MY K I DA +F +
Sbjct: 160 VTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 219
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
KDI SWN+I + C + + + L M
Sbjct: 220 EKDIF----------------------------SWNSIXSVHEQCGDHDGTLRLLDRMLG 251
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF------YSNVPVCNAILQHQA- 356
+ PD +TV ++L AC+ +L G +IH Y+I G +V + NA++ A
Sbjct: 252 AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAK 311
Query: 357 -----------------------------------GELFRLFSLMLASQTKPDHITFNDV 381
E +FS M Q KPD +TF V
Sbjct: 312 CGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGV 371
Query: 382 MGACAAMASLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DP 439
+ AC+ + G + K +A + ++DM + G L A EL M +
Sbjct: 372 LSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEA 431
Query: 440 DVVSWSSLI 448
+ V W +L+
Sbjct: 432 NPVVWRALL 440
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,717,848,384
Number of Sequences: 23463169
Number of extensions: 389731960
Number of successful extensions: 1435567
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8787
Number of HSP's successfully gapped in prelim test: 2818
Number of HSP's that attempted gapping in prelim test: 1213485
Number of HSP's gapped (non-prelim): 70606
length of query: 634
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 485
effective length of database: 8,863,183,186
effective search space: 4298643845210
effective search space used: 4298643845210
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)