BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036704
(634 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/688 (50%), Positives = 448/688 (65%), Gaps = 111/688 (16%)
Query: 49 DLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
D +SLCK N Y EAL AFDF Q N++F+IR TY LI ACSS RSL GRK+HDHIL+
Sbjct: 36 DHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN 95
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
S C+ D +L+NHIL+MYGKCGSL DAR VFD MP+RN+VS+T++I G SQNGQ AI L
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------------- 215
Y++MLQ L+PDQF FGSII+AC+ VGLG+QLHA VIK E SH
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 216 ------------------LISQNALIAMYTKFDRILDA---------WNVF--------- 239
LIS +++IA +++ +A + VF
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 240 -----SSIARKDITSW-----------GSMIDGFSKLDF---------ARTVFNEMESPN 274
SS+ R D S G+ I G S D AR VF+++E P+
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
ASWN IIAG+A+ A+EA+S+FS+M IPD +++RSLLCA T P++L QGMQIHS
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 335 YIIKKGFYSNVPVCNAIL------------------------------------QH-QAG 357
YIIK GF +++ VCN++L QH Q
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E+ RLF LML S+ +PDHIT +++ C ++SL++G+Q+HCY +KTGLA + F+ NGL+
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
DMY KCGSLG AR +F+ M++ DVVSWS+LIVGYAQ G GEEAL LF+ M+S+G+ PNHV
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T VGVLTACSHVGLVEEGL+LY MQ E+GI PT+E SCVVDLLARAGR++EAE FI++
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M + D+VVWK+LL++CKT GNV + ++AAENILKIDP NS A VLLC+++ASSG WE
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A L SMK+ V+K+PGQSWIEI+ KIH
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWIEIEDKIH 723
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 320/606 (52%), Gaps = 71/606 (11%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
LD+A + S R W+ + S + + EAL F + F + ++A +
Sbjct: 101 FLDEADSLFRSMPERDQCTWN-SMVSGFAQHDRCEEALCYFAMMHKE-GFVLNEYSFASV 158
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+SACS L + G +VH I S D + + +++MY KCG++ DA+ VFDEM RNV
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSW ++I QNG A++++ ML+S + PD+ T S+I AC+ L + +G+++H
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 207 VIKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
V+K++ + +I NA + MY K RI +A R
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEA----------------------------RF 310
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+F+ M N+ + ++I+G A ++ A +F++M +R ++
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS----------------- 353
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
N + + E LF L+ P H +F +++ AC
Sbjct: 354 -----------------WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 386 AAMASLEMGTQLHCYIMKTGLAL------DVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
A +A L +G Q H +++K G D+FV N L+DMYVKCG + +F M +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
D VSW+++I+G+AQ G G EAL+LFR M SG +P+H+T++GVL+AC H G VEEG +
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
M ++G+ P R+ +C+VDLL RAG + EA+ I +M D V+W SLLA+CK H N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 560 VDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+ +GK AE +L+++P+NS VLL N+YA GKWE+V + SM++ GV K PG SWI+
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
Query: 620 IQTKIH 625
IQ H
Sbjct: 637 IQGHDH 642
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 317/586 (54%), Gaps = 64/586 (10%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
+ P Y + ++SACS L L+ G+++H HIL + DA L N +++ Y KCG + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC 195
+F+ MP +N++SWT +++G QN A+EL+ M + GL PD + SI+ +C+ L
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 196 CVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID 255
+G G Q+HA+ IK+ G+ N+LI MY K D + DA VF A D+ + +MI+
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 256 GFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRS 315
G+S+L W +EA+++F +M R + P LT S
Sbjct: 425 GYSRLG--------------TQWEL-----------HEALNIFRDMRFRLIRPSLLTFVS 459
Query: 316 LLCACTSPLSLYQGMQIHSYIIKKGF-------------YSN------------------ 344
LL A S SL QIH + K G YSN
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 345 VPVCNAIL-----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHC 399
+ + N++ Q + E LF + S+ +PD TF +++ A +AS+++G + HC
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 400 YIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
++K GL + ++ N L+DMY KCGS A + F+ DVV W+S+I YA G G++
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL++ +M S G+ PN++T VGVL+ACSH GLVE+GL+ + +M +GI P E C+V
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMV 698
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
LL RAGR+++A + I +M +VW+SLL+ C GNV++ + AAE + DP +S
Sbjct: 699 SLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSG 758
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+ +L NIYAS G W E ++ MK GV K PG+SWI I ++H
Sbjct: 759 SFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVH 804
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/561 (26%), Positives = 266/561 (47%), Gaps = 80/561 (14%)
Query: 57 QNLYNEALVAF-DFLQNNTNFRIRPSTY--ADLISACSSL--RSLQLGRKVHDHILSSKC 111
+Y E+LV F +F + + P+ Y + I ACS L R + ++ ++ S
Sbjct: 123 HGIYEESLVVFLEFWRTRKD---SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF 179
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
D + +++ Y K G+++ AR+VFD +P+++ V+WT MI+GC + G+ +++L+ Q
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
+++ ++PD + +++ ACS L + G+Q+HAH+++ N LI Y K R
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
++ A +F+ + K+I SW +++ G+ + N +
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQ--------NALH-------------------- 331
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
EAM LF+ M L PD S+L +C S +L G Q+H+Y IK ++ V N++
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSL 391
Query: 352 L---------------------------------------QHQAGELFRLFSLMLASQTK 372
+ Q + E +F M +
Sbjct: 392 IDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIR 451
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
P +TF ++ A A++ SL + Q+H + K GL LD+F + L+D+Y C L +R +
Sbjct: 452 PSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLV 511
Query: 433 FNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV 492
F+ M+ D+V W+S+ GY Q EEAL LF ++ S RP+ T ++TA ++ V
Sbjct: 512 FDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571
Query: 493 EEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ G Q + + G+ + ++D+ A+ G +A + A D+V W S+++
Sbjct: 572 QLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVIS 629
Query: 553 SCKTHGNVDVGKRAAENILKI 573
S HG GK+A + + K+
Sbjct: 630 SYANHGE---GKKALQMLEKM 647
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 243/514 (47%), Gaps = 76/514 (14%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP 142
+A L+ +S L VH I+ + D L N ++N+Y + G + AR VF++MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 143 QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIRACSGLCCVGLGR 201
+RN+VSW+ M++ C+ +G ++ ++++ ++ P+++ S I+ACSGL G GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGR 164
Query: 202 ----QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
QL + ++KS + LI Y K I A VF ++ K +W +MI G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
K+ + ++ LF ++ + ++PDG + ++L
Sbjct: 225 VKM----------------------------GRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH--------QAGELF--------- 360
AC+ L G QIH++I++ G + + N ++ A +LF
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 361 -------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
LF+ M KPD + ++ +CA++ +L GTQ+H Y
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG---E 458
+K L D +V N L+DMY KC L AR++F+ DVV ++++I GY++ G
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EAL +FR MR +RP+ +T V +L A + + + Q++ +M +YG+ S +
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSAL 495
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+D+ + + ++ ++M D+V+W S+ A
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFA 528
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H I+ GL LD ++ N L+++Y + G + AR++F M + ++VSWS+++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 457 GEEALKLFRRM-RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
EE+L +F R+ PN L + ACS GL +G + + Q + ++ + R
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GL--DGRGRWMVFQLQSFLVKSGFDR 181
Query: 516 -----SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++D + G + A + + + V W ++++ C G
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMG 228
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 348 bits (892), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 345/683 (50%), Gaps = 123/683 (18%)
Query: 63 ALVAFDFLQNNTNFRIRP---STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHN 119
A+ A D + + IRP T++ L+ +C R +LG+ VH ++ +PD+VL+N
Sbjct: 45 AVSALDLMARDG---IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 120 HILNMYGKCGSLEDARMVFDEMP---QRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSG 176
++++Y K G A VF+ M +R+VVSW+AM+A NG+E AI+++V+ L+ G
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 177 LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH-------GSHLIS-----QNALIA 224
L+P+ + + ++IRACS VG+GR ++K+ H G LI +N+
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 225 MYTKFDRILD----AW------------------------------------NVFSSIAR 244
Y FD++ + W +VFS+ A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 245 -------KDITSWG-----------SMIDGFSK------LDFARTVFNEMESPNLASWNT 280
K + SW S++D ++K +D R VF+ ME ++ SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTA 341
Query: 281 IIAG-VASCSNANEAMSLFSEMGDRELI-PDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+I G + +C+ A EA++LFSEM + + P+ T S AC + G Q+ K
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 339 KGFYSNVPVCNAILQ-----------HQAGE-------------------------LFRL 362
+G SN V N+++ +A E F+L
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
S + + TF ++ A + S+ G Q+H ++K GL+ + V N L+ MY K
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ +A +FNFME+ +V+SW+S+I G+A+ G L+ F +M GV+PN VT V +
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSHVGLV EG + + M ++ I P E +C+VDLL RAG + +A +FIN M F
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA 641
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D++VW++ L +C+ H N ++GK AA IL++DP AA + L NIYA +GKWEE +
Sbjct: 642 DVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRR 701
Query: 603 SMKERGVRKVPGQSWIEIQTKIH 625
MKER + K G SWIE+ KIH
Sbjct: 702 KMKERNLVKEGGCSWIEVGDKIH 724
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 224/532 (42%), Gaps = 86/532 (16%)
Query: 25 CMLLDQAGEVVDSF---LRRFDDIWDFDLFS-----SLCKQNLYNEALVAFDFLQNNTNF 76
C L+D + +SF + FD + + ++ + + C Q + + F + F
Sbjct: 206 CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF 265
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKC---GSLED 133
T + + SAC+ L +L LG+++H + S D + +++MY KC GS++D
Sbjct: 266 ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDD 323
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQN-GQENAAIELYVQMLQSG-LMPDQFTFGSIIRAC 191
R VFD M +V+SWTA+I G +N AI L+ +M+ G + P+ FTF S +AC
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 192 SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWG 251
L +G+Q+ K S+ N++I+M+ K DR+ DA F S++ K
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK------ 437
Query: 252 SMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGL 311
NL S+NT + G N +A L SE+ +REL
Sbjct: 438 ----------------------NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 312 TVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFRL- 362
T SLL + S+ +G QIHS ++K G N PVCNA++ A +F
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 363 ---------------------------FSLMLASQTKPDHITFNDVMGACAAMASLEMG- 394
F+ M+ KP+ +T+ ++ AC+ + + G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQ 453
+ + + ++D+ + G L A E N M DV+ W + + G +
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL-GACR 654
Query: 454 FGCGEEALKLFRR--MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
E KL R + P + + AC+ G EE ++ R M+
Sbjct: 655 VHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA--GKWEESTEMRRKMK 704
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 141/285 (49%), Gaps = 28/285 (9%)
Query: 51 FSSLCKQNL--YNEAL----------VAFDFLQNNTNFRIRPS--TYADLISACSSLRSL 96
F SL ++NL YN L AF L T + S T+A L+S +++ S+
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 97 QLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGC 156
+ G ++H ++ + + N +++MY KCGS++ A VF+ M RNV+SWT+MI G
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG-RQLHAHVIKSEHGSH 215
+++G +E + QM++ G+ P++ T+ +I+ ACS + V G R ++ +
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPK 610
Query: 216 LISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG--------FSKLDFARTV 266
+ ++ + + + DA+ +++ + D+ W + + KL AR +
Sbjct: 611 MEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA-ARKI 669
Query: 267 FNEMESPNLASWNTIIAGVASCSNA-NEAMSLFSEMGDRELIPDG 310
E++ PN + ++ + +C+ E+ + +M +R L+ +G
Sbjct: 670 L-ELD-PNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/593 (34%), Positives = 324/593 (54%), Gaps = 47/593 (7%)
Query: 80 PST--YADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P T Y +++ A + ++S R+V D I QP+ N++L Y K G + +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRI----PQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCC 196
F+++P R+ V+W +I G S +G AA++ Y M++ + T ++++ S
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
V LG+Q+H VIK S+L+ + L+ MY I DA VF + ++ + S++ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 257 F---SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ A +F ME ++ SW +I G+A A EA+ F EM + L D
Sbjct: 215 LLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF----- 360
S+L AC ++ +G QIH+ II+ F ++ V +A++ H A +F
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 361 -----------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
++F M S PDH T + ACA ++SLE G+Q
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
H + +GL V V N L+ +Y KCG + + LFN M D VSW++++ YAQFG
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
E ++LF +M G++P+ VTL GV++ACS GLVE+G + +++M +EYGI+P+ SC
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
++DL +R+GR+ EA FIN M F D + W +LL++C+ GN+++GK AAE+++++DP +
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHH 573
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASGND 630
A LL +IYAS GKW+ VA+L M+E+ V+K PGQSWI+ + K+H+ D
Sbjct: 574 PAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSAD 626
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 163/350 (46%), Gaps = 36/350 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
+ L + L EA+ F ++ ++ + ++ AC L ++ G+++H I+ +
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
Q + + +++MY KC L A+ VFD M Q+NVVSWTAM+ G Q G+ A++++
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
+ M +SG+ PD +T G I AC+ + + G Q H I S ++ N+L+ +Y K
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
I D+ +F+ + +D SW +M+ +++ F R V
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ--FGRAV----------------------- 454
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP--- 346
E + LF +M L PDG+T+ ++ AC+ + +G + + + Y VP
Sbjct: 455 ---ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE--YGIVPSIG 509
Query: 347 --VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
C L ++G L + PD I + ++ AC +LE+G
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 200/497 (40%), Gaps = 99/497 (19%)
Query: 21 AFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP 80
A+ L+ + + R W+ L L A+ A++ + + + +
Sbjct: 81 AYSKAGLISEMESTFEKLPDRDGVTWNV-LIEGYSLSGLVGAAVKAYNTMMRDFSANLTR 139
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
T ++ SS + LG+++H ++ + ++ + +L MY G + DA+ VF
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 141 MPQRNV------------------------------VSWTAMIAGCSQNGQENAAIELYV 170
+ RN VSW AMI G +QNG AIE +
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
+M GL DQ+ FGS++ AC GL + G+Q+HA +I++ H+ +ALI MY K
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
+ A VF + +K++ SW +M+ G+ +
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQ----------------------------TGR 351
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNA 350
A EA+ +F +M + PD T+ + AC + SL +G Q H I G V V N+
Sbjct: 352 AEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNS 411
Query: 351 ILQ------------------------------------HQAGELFRLFSLMLASQTKPD 374
++ +A E +LF M+ KPD
Sbjct: 412 LVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKT--GLALDVFVMNGLMDMYVKCGSLGSAREL 432
+T V+ AC+ +E G Q + +M + G+ + + ++D++ + G L A
Sbjct: 472 GVTLTGVISACSRAGLVEKG-QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 433 FNFME-DPDVVSWSSLI 448
N M PD + W++L+
Sbjct: 531 INGMPFPPDAIGWTTLL 547
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 202/494 (40%), Gaps = 92/494 (18%)
Query: 196 CVGLG--------RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
C+GLG + +H ++I++ N ++ Y A VF I + ++
Sbjct: 13 CIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL 72
Query: 248 TSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE-MGD 303
SW +++ +SK + + F ++ + +WN +I G + A+ ++ M D
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GE 358
+T+ ++L +S + G QIH +IK GF S + V + +L A +
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA----LDVFVMN 414
++F + T + +N +MG A +E QL + K ++ + N
Sbjct: 193 AKKVFYGLDDRNT----VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 415 GL-----------------MDMY------VKCGSLGS----------------------- 428
GL MD Y CG LG+
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 429 ---------------ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
A+ +F+ M+ +VVSW++++VGY Q G EEA+K+F M+ SG+
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
P+H TL ++AC++V +EEG Q + G+I + +V L + G + ++
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITS-GLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 534 FINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLLCNIYA 589
N+M D V W +++++ G + + + ++ LK D ++ C+
Sbjct: 428 LFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 590 SSGKWEEVARLMGS 603
K + +LM S
Sbjct: 487 LVEKGQRYFKLMTS 500
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 304/582 (52%), Gaps = 64/582 (10%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+T A L+ ACS+ +L G+++H + + + +LN+Y KC +E A F E
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
NVV W M+ + ++ QM ++P+Q+T+ SI++ C L + LG
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
Q+H+ +IK+ + + LI MY K ++ AW++ A KD+ S
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS----------- 558
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
W T+IAG + ++A++ F +M DR + D + + + + AC
Sbjct: 559 -----------------WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 601
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-----------------QHQAG------ 357
+L +G QIH+ GF S++P NA++ Q +AG
Sbjct: 602 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 358 -------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E R+F M ++ TF + A + A+++ G Q+H I KT
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G + V N L+ MY KCGS+ A + F + + VSW+++I Y++ G G EAL F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+M S VRPNHVTLVGVL+ACSH+GLV++G+ + M +EYG+ P E CVVD+L R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG + A++FI +M D +VW++LL++C H N+++G+ AA ++L+++P +SA VLL
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N+YA S KW+ MKE+GV+K PGQSWIE++ IH+
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 156/572 (27%), Positives = 269/572 (47%), Gaps = 69/572 (12%)
Query: 31 AGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
A +V D R W+ + L +NL E F + + N T++ ++ AC
Sbjct: 139 AFKVFDEMPERTIFTWN-KMIKELASRNLIGEVFGLFVRMVSE-NVTPNEGTFSGVLEAC 196
Query: 91 SSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
+ + ++H IL + V+ N ++++Y + G ++ AR VFD + ++ SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
AMI+G S+N E AI L+ M G+MP + F S++ AC + + +G QLH V+K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
S NAL+++Y ++ A ++FS+++++D
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV--------------------- 355
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
++NT+I G++ C +AM LF M L PD T+ SL+ AC++ +L++G
Sbjct: 356 -------TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQA------------------------------GEL 359
Q+H+Y K GF SN + A+L A G L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 360 ------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
FR+F M + P+ T+ ++ C + LE+G Q+H I+KT L+ +V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ L+DMY K G L +A ++ DVVSW+++I GY Q+ ++AL FR+M G+R
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
+ V L ++AC+ + ++EG Q++ G ++ +V L +R G++ E+
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 534 FINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
Q D+I W +L++ + GN + R
Sbjct: 648 AFEQTEAGDNI-AWNALVSGFQQSGNNEEALR 678
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 233/515 (45%), Gaps = 66/515 (12%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P ++ ++SAC + SL++G ++H +L D + N ++++Y G+L A +F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
M QR+ V++ +I G SQ G A+EL+ +M GL PD T S++ ACS +
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+QLHA+ K S+ + AL+ +Y K I A
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA------------------------ 443
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
LD+ F E E N+ WN ++ + + +F +M E++P+ T S+L
Sbjct: 444 LDY----FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GEL------------------ 359
C L G QIHS IIK F N VC+ ++ A G+L
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 360 ----------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
F ML + D + + + ACA + +L+ G Q+H
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKL 463
+G + D+ N L+ +Y +CG + + F E D ++W++L+ G+ Q G EEAL++
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 464 FRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLA 523
F RM G+ N+ T + A S +++G Q++ ++ + G E + ++ + A
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYA 738
Query: 524 RAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ G + +AE +++ ++ V W +++ + HG
Sbjct: 739 KCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKHG 772
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 228/519 (43%), Gaps = 72/519 (13%)
Query: 75 NFRIRPS--TYADLISACSSLR-SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
N IRP+ T L+ C SL GRK+H IL + L + + Y G L
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 132 EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC 191
A VFDEMP+R + +W MI + L+V+M+ + P++ TF ++ AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 192 -SGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
G + Q+HA ++ + N LI +Y++
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR---------------------- 234
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
+GF +D AR VF+ + + +SW +I+G++ EA+ LF +M ++P
Sbjct: 235 ----NGF--VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGELF-------- 360
S+L AC SL G Q+H ++K GF S+ VCNA+ L G L
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 361 --------------------------RLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
LF M +PD T ++ AC+A +L G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
QLH Y K G A + + L+++Y KC + +A + F E +VV W+ ++V Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRE 513
+ ++FR+M+ + PN T +L C +G +E G Q++ +I++ + +
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL--NAY 526
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
S ++D+ A+ G++ A D + + A D+V W +++A
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIA 564
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 189/440 (42%), Gaps = 78/440 (17%)
Query: 59 LYNEALVAFDFLQNNTN-FRI-----------RPSTYADLISACSSLRSLQLGRKVHDHI 106
L+N LVA+ L + N FRI TY ++ C L L+LG ++H I
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 107 LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
+ + Q +A + + +++MY K G L+ A + ++VVSWT MIAG +Q ++ A+
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 167 ELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMY 226
+ QML G+ D+ + + AC+GL + G+Q+HA S S L QNAL+ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 227 TKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVA 286
++ +I +++ F D +W +++ GF +
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ--------------------------- 669
Query: 287 SCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVP 346
N EA+ +F M + + T S + A + ++ QG Q+H+ I K G+ S
Sbjct: 670 -SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 728
Query: 347 VCNAIL-----------------------------------QHQAG-ELFRLFSLMLASQ 370
VCNA++ +H G E F M+ S
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 371 TKPDHITFNDVMGACAAMASLEMG-TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+P+H+T V+ AC+ + ++ G + GL+ ++DM + G L A
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 430 RELFNFME-DPDVVSWSSLI 448
+E M PD + W +L+
Sbjct: 849 KEFIQEMPIKPDALVWRTLL 868
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 181/417 (43%), Gaps = 79/417 (18%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
A VF+EM + +WN +I +AS + E LF M + P+ T +L AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 323 PLSLYQGM-QIHSYIIKKGFYSNVPVCNAILQ----------------------HQA--- 356
+ + QIH+ I+ +G + VCN ++ H +
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 357 -----------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
E RLF M P F+ V+ AC + SLE+G QLH ++K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ D +V N L+ +Y G+L SA +F+ M D V++++LI G +Q G GE+A++LF+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
RM G+ P+ TL ++ ACS G + G QL+ + G + +++L A+
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH-AYTTKLGFASNNKIEGALLNLYAKC 437
Query: 526 GRVHEAEDFINQMAFDDDIVVWK-----------------------------------SL 550
+ A D+ + +++V+W S+
Sbjct: 438 ADIETALDYFLETEV-ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 551 LASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYASSGK----WEEVARLMG 602
L +C G++++G++ I+K + N+ +L ++YA GK W+ + R G
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 170/370 (45%), Gaps = 33/370 (8%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
LD A +++ F + W + + + N ++AL F + + R + +
Sbjct: 541 LDTAWDILIRFAGKDVVSWT-TMIAGYTQYNFDDKALTTFRQMLDR-GIRSDEVGLTNAV 598
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
SAC+ L++L+ G+++H S D N ++ +Y +CG +E++ + F++ + +
Sbjct: 599 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W A+++G Q+G A+ ++V+M + G+ + FTFGS ++A S + G+Q+HA +
Sbjct: 659 AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 718
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
K+ + S NALI+MY K I DA F
Sbjct: 719 TKTGYDSETEVCNALISMYAKCGSISDA----------------------------EKQF 750
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
E+ + N SWN II + +EA+ F +M + P+ +T+ +L AC+ +
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 328 QGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGA 384
+G+ + + S P VC + +AG L R + KPD + + ++ A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 385 CAAMASLEMG 394
C ++E+G
Sbjct: 871 CVVHKNMEIG 880
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 203/643 (31%), Positives = 326/643 (50%), Gaps = 70/643 (10%)
Query: 22 FELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS 81
+ C ++ A +V ++ + D W+ + N + ++ ++ + I
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY--AHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ L+S C++ L++G + H I+ K + + N +++MY KCG+LEDAR +F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
R+ V+W +I Q+ E+ A +L+ +M G++ D S ++AC+ + + G+
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
Q+H +K L + ++LI MY+K I DA
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA-------------------------- 583
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
R VF+ + ++ S N +IAG S +N EA+ LF EM R + P +T +++ AC
Sbjct: 584 --RKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 322 SPLSLYQGMQIHSYIIKKGF---------------------------YSNVPVCNAIL-- 352
P SL G Q H I K+GF +S + +I+
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 353 ------QHQAG---ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
Q G E + + M PD TF V+ C+ ++SL G +H I
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMED-PDVVSWSSLIVGYAQFGCGEEALK 462
LD N L+DMY KCG + + ++F+ M +VVSW+SLI GYA+ G E+ALK
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
+F MR S + P+ +T +GVLTACSH G V +G +++ +M +YGI + +C+VDLL
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
R G + EA+DFI D +W SLL +C+ HG+ G+ +AE +++++P NS+A V
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYV 940
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
LL NIYAS G WE+ L M++RGV+KVPG SWI+++ + H
Sbjct: 941 LLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTH 983
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 246/546 (45%), Gaps = 73/546 (13%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
+ + F ++ + ST ++SA + +L LG VH + + + + +++M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y KC +E A VF+ + ++N V W AMI G + NG+ + +EL++ M SG D FTF
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
S++ C+ + +G Q H+ +IK + +L NAL+ MY K + DA +F +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+D +WNTII N +EA LF M
Sbjct: 492 RDNV----------------------------TWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF----------------------- 341
++ DG + S L ACT LYQG Q+H +K G
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 342 ---YSNVP-----VCNAIL----QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMA 389
+S++P NA++ Q+ E LF ML P ITF ++ AC
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 390 SLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPD-VVSWSSL 447
SL +GTQ H I K G + + ++ L+ MY+ + A LF+ + P +V W+ +
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
+ G++Q G EEALK ++ MR GV P+ T V VL CS + + EG ++ ++ +
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH 763
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
+ + ++D+ A+ G + + ++M ++V W SL+ +G A
Sbjct: 764 DLDELTSNT-LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG-------YA 815
Query: 568 ENILKI 573
E+ LKI
Sbjct: 816 EDALKI 821
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 232/518 (44%), Gaps = 76/518 (14%)
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+L++G+ VH L + L N I+++Y KC + A FD + +++V +W +M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 155 GCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
S G+ + +V + ++ + P++FTF ++ C+ V GRQ+H +IK
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF----------------- 257
+ AL+ MY K DRI DA VF I + W + G+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 258 ---------------------SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMS 296
KL AR +F EM SP++ +WN +I+G A+
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 297 LFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL---- 352
F M + T+ S+L A +L G+ +H+ IK G SN+ V ++++
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 353 --------------------------------QHQAGELFRLFSLMLASQTKPDHITFND 380
++ ++ LF M +S D TF
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
++ CAA LEMG+Q H I+K LA ++FV N L+DMY KCG+L AR++F M D D
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
V+W+++I Y Q EA LF+RM G+ + L L AC+HV + +G Q++
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH- 552
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
+ + G+ S ++D+ ++ G + +A + +
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 192/424 (45%), Gaps = 65/424 (15%)
Query: 112 QPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
+PD + ++N Y + G L+DAR++F EM +VV+W MI+G + G E AIE +
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
M +S + + T GS++ A + + LG +HA IK S++ ++L++MY+K ++
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+ A VF ++ K+ VF WN +I G A +
Sbjct: 378 MEAAAKVFEALEEKN------------------DVF----------WNAMIRGYAHNGES 409
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
++ M LF +M D T SLL C + L G Q HS IIKK N+ V NA+
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNAL 469
Query: 352 LQHQA------------------------------------GELFRLFSLMLASQTKPDH 375
+ A E F LF M D
Sbjct: 470 VDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Query: 376 ITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNF 435
+ AC + L G Q+HC +K GL D+ + L+DMY KCG + AR++F+
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 436 MEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEG 495
+ + VVS ++LI GY+Q EEA+ LF+ M + GV P+ +T ++ AC + G
Sbjct: 590 LPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG 648
Query: 496 LQLY 499
Q +
Sbjct: 649 TQFH 652
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 202/498 (40%), Gaps = 70/498 (14%)
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSH------LISQNALI 223
V + S M D F+F +R S LGR+++ HV+ S H + Q L
Sbjct: 5 VLLTPSSAMFDSFSF---VRRLS--YSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLF 59
Query: 224 AMYTKFD----RILDAWNVFSSIARKD----ITSWG----SMIDGFSK---LDFARTVFN 268
FD R+ A + ++ K I S G +++D ++K + +A F+
Sbjct: 60 KSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD 119
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
+E ++ +WN++++ +S + + F + + ++ P+ T +L C ++
Sbjct: 120 FLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEF 178
Query: 329 GMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPDHITFNDVMG 383
G QIH +IK G N A++ A + R+F ++ P+ + + +
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV----DPNTVCWTCLFS 234
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
E + + G D +++ Y++ G L AR LF M PDVV+
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVA 294
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY---- 499
W+ +I G+ + GC A++ F MR S V+ TL VL+A V ++ GL ++
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 500 ---------------------RIMQNEYGIIPTRERRSCV-----VDLLARAGRVHEAED 533
M+ + E ++ V + A G H+ +
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414
Query: 534 FINQM---AFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCNIYA 589
M ++ D + SLL++C ++++G + I+K N L ++YA
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 590 SSGKWEEVARLMGSMKER 607
G E+ ++ M +R
Sbjct: 475 KCGALEDARQIFERMCDR 492
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 18/228 (7%)
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+L +G +H + G+ + + N ++D+Y KC + A + F+F+E DV +W+S++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
Y+ G + L+ F + + + PN T VL+ C+ VE G Q++ M I
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IK 188
Query: 510 PTRERRS----CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVD 561
ER S +VD+ A+ R+ +A + + D + V W L + G V
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGV 609
V +R + + D A V + N Y GK ++ L G M V
Sbjct: 248 VFERMRDEGHRPD---HLAFVTVINTYIRLGKLKDARLLFGEMSSPDV 292
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 301/550 (54%), Gaps = 44/550 (8%)
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
++++Y L +A ++F + V++W ++I + + A+ +V+M SG PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF---DRILDAWN 237
F S++++C+ + + G +H +++ L + NAL+ MY K + N
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 238 VFSSIARKDITSWGSMIDGFS-----KLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
VF + ++ S + + +D R VF M ++ S+NTIIAG A
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
+A+ + EMG +L PD T+ S+L + + + +G +IH Y+I+KG S+V + ++++
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 353 QHQA------------------------------------GELFRLFSLMLASQTKPDHI 376
A E RLF M+ ++ KP +
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
F+ V+ ACA +A+L +G QLH Y+++ G ++F+ + L+DMY KCG++ +AR++F+ M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
D VSW+++I+G+A G G EA+ LF M+ GV+PN V V VLTACSHVGLV+E
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 497 QLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKT 556
+ M YG+ E + V DLL RAG++ EA +FI++M + VW +LL+SC
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 557 HGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
H N+++ ++ AE I +D N A VL+CN+YAS+G+W+E+A+L M+++G+RK P S
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584
Query: 617 WIEIQTKIHA 626
WIE++ K H
Sbjct: 585 WIEMKNKTHG 594
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 180/381 (47%), Gaps = 56/381 (14%)
Query: 35 VDSFLRRFD-----DIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
+DS R F+ D+ ++ + + + +Y +AL + T+ + T + ++
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLP 250
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
S + G+++H +++ D + + +++MY K +ED+ VF + R+ +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +++AG QNG+ N A+ L+ QM+ + + P F S+I AC+ L + LG+QLH +V+
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 209 KSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFN 268
+ GS++ +AL+ MY+K I A R +F+
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAA----------------------------RKIFD 402
Query: 269 EMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ 328
M + SW II G A + +EA+SLF EM + + P+ + ++L AC+ +
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS-----HV 457
Query: 329 GMQIHSYIIKKGFY---SNVPVCNAILQH---------QAGELFRLFSLMLASQTKPDHI 376
G+ ++ G++ + V N L+H +AG+L ++ + +P
Sbjct: 458 GLVDEAW----GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGS 513
Query: 377 TFNDVMGACAAMASLEMGTQL 397
++ ++ +C+ +LE+ ++
Sbjct: 514 VWSTLLSSCSVHKNLELAEKV 534
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 191/475 (40%), Gaps = 121/475 (25%)
Query: 57 QNLYNEALVAFDFLQNN---TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
Q+L+++AL +F ++ + + + PS ++ +C+ + L+ G VH I+
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPS----VLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 114 DAVLHNHILNMYGKC---GSLEDARMVFDEMPQR-------------------------- 144
D N ++NMY K GS VFDEMPQR
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 145 -------NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
+VVS+ +IAG +Q+G A+ + +M + L PD FT S++ S V
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G+++H +VI+ S + ++L+ MY K RI D+ VFS + +D SW
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW------- 311
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
N+++AG NEA+ LF +M ++ P + S++
Sbjct: 312 ---------------------NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI-------------------------- 351
AC +L+ G Q+H Y+++ GF SN+ + +A+
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV 410
Query: 352 ----------LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
L E LF M KP+ + F V+ AC+ + ++ +
Sbjct: 411 SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Query: 402 MKTGLALDVFVMNGLMDMYVKC----GSLGSARELFNFME----DPDVVSWSSLI 448
K V+ +N ++ Y G G E +NF+ +P WS+L+
Sbjct: 471 TK------VYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 183/437 (41%), Gaps = 113/437 (25%)
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
+QLHA I+++ SH S + +I++YT + +A +F +
Sbjct: 24 AKQLHAQFIRTQSLSH-TSASIVISIYTNLKLLHEALLLFKT------------------ 64
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCA 319
++SP + +W ++I S ++A++ F EM PD S+L +
Sbjct: 65 ----------LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKS 114
Query: 320 CTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----------GELF-------- 360
CT + L G +H +I++ G ++ NA++ A G +F
Sbjct: 115 CTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTS 174
Query: 361 ----------------------RLFSLMLASQTKPDHITFNDVMGACAAMASL------- 391
R+F +M + D +++N ++ A
Sbjct: 175 NSGDEDVKAETCIMPFGIDSVRRVFEVM----PRKDVVSYNTIIAGYAQSGMYEDALRMV 230
Query: 392 -EMGT---------------------------QLHCYIMKTGLALDVFVMNGLMDMYVKC 423
EMGT ++H Y+++ G+ DV++ + L+DMY K
Sbjct: 231 REMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS 290
Query: 424 GSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVL 483
+ + +F+ + D +SW+SL+ GY Q G EAL+LFR+M ++ V+P V V+
Sbjct: 291 ARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
Query: 484 TACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
AC+H+ + G QL+ +++ +G S +VD+ ++ G + A ++M D
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNVLD 408
Query: 543 DIVVWKSLLASCKTHGN 559
+ V W +++ HG+
Sbjct: 409 E-VSWTAIIMGHALHGH 424
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 335 bits (858), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 330/641 (51%), Gaps = 73/641 (11%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L +A V D W+ L + L K ++ ++ F + + + + T++
Sbjct: 142 CGDLKEASRVFDEVKIEKALFWNI-LMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFS 199
Query: 85 DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
+ + SSLRS+ G ++H IL S + N ++ Y K ++ AR VFDEM +R
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V+SW ++I G NG + ++VQML SG+ D T S+ C+ + LGR +H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LD 261
+ +K A +++ DR + +++D +SK LD
Sbjct: 320 SIGVK--------------ACFSREDRFCN-----------------TLLDMYSKCGDLD 348
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A+ VF EM ++ S+ ++IAG A A EA+ LF EM + + PD TV ++L C
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------- 356
L +G ++H +I + ++ V NA++ A
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 357 -----------GELFRLFSLMLASQT-KPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
E LF+L+L + PD T V+ ACA++++ + G ++H YIM+
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
G D V N L+DMY KCG+L A LF+ + D+VSW+ +I GY G G+EA+ LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
+MR +G+ + ++ V +L ACSH GLV+EG + + IM++E I PT E +C+VD+LAR
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
G + +A FI M D +W +LL C+ H +V + ++ AE + +++P N+ VL+
Sbjct: 649 TGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLM 708
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
NIYA + KWE+V RL + +RG+RK PG SWIEI+ +++
Sbjct: 709 ANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 206/645 (31%), Positives = 337/645 (52%), Gaps = 64/645 (9%)
Query: 37 SFLRRFDDI------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISAC 90
S LRRF W+ L S N+ L F L ++ ++ T+ + AC
Sbjct: 80 SLLRRFPPSDAGVYHWN-SLIRSYGDNGCANKCLYLFG-LMHSLSWTPDNYTFPFVFKAC 137
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
+ S++ G H L + + + N ++ MY +C SL DAR VFDEM +VVSW
Sbjct: 138 GEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWN 197
Query: 151 AMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
++I ++ G+ A+E++ +M G PD T +++ C+ L LG+QLH +
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL---DFARTV 266
SE ++ N L+ MY K + +A VFS+++ KD+ SW +M+ G+S++ + A +
Sbjct: 258 SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRL 317
Query: 267 FNEMESP----NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
F +M+ ++ +W+ I+G A EA+ + +M + P+ +T+ S+L C S
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 323 PLSLYQGMQIHSYIIK-------KGFYSNVPVCNAIL----------------------- 352
+L G +IH Y IK G V N ++
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 353 --------------QH-QAGELFRLFSLMLAS--QTKPDHITFNDVMGACAAMASLEMGT 395
QH A + L S M QT+P+ T + + ACA++A+L +G
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 396 QLHCYIMKTGL-ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQF 454
Q+H Y ++ A+ +FV N L+DMY KCGS+ AR +F+ M + V+W+SL+ GY
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Query: 455 GCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRER 514
G GEEAL +F MR G + + VTL+ VL ACSH G++++G++ + M+ +G+ P E
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617
Query: 515 RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKID 574
+C+VDLL RAGR++ A I +M + VVW + L+ C+ HG V++G+ AAE I ++
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELA 677
Query: 575 PTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIE 619
+ + LL N+YA++G+W++V R+ M+ +GV+K PG SW+E
Sbjct: 678 SNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/540 (25%), Positives = 241/540 (44%), Gaps = 70/540 (12%)
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
P I C ++ ++L +H +LS L +H+++ Y G L A +
Sbjct: 28 PEITPPFIHKCKTISQVKL---IHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLR 83
Query: 140 EMPQRN--VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
P + V W ++I NG N + L+ M PD +TF + +AC + V
Sbjct: 84 RFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSV 143
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
G HA + + S++ NAL+AMY++ + DA VF ++ D+ SW S+I+ +
Sbjct: 144 RCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 258 SKL---DFARTVFNEMES---------------PNLASWNT------------------- 280
+KL A +F+ M + P AS T
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 281 ------IIAGVASCSNANEAMSLFSEMGDRELIPDGLTV--RSLLCACTSPLSLYQGMQI 332
++ A C +EA ++FS M ++++ V S + + L++ MQ
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 333 HSYIIKKGFYSNVPVCNAILQHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
IK + + Q G E + ML+S KP+ +T V+ CA++ +L
Sbjct: 324 EK--IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 392 EMGTQLHCYIMKTGLAL-------DVFVMNGLMDMYVKCGSLGSARELFNFM--EDPDVV 442
G ++HCY +K + L + V+N L+DMY KC + +AR +F+ + ++ DVV
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRM--RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR 500
+W+ +I GY+Q G +AL+L M RPN T+ L AC+ + + G Q++
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 501 I-MQNEYGIIPTRERRSCVVDLLARAGRVHEAE-DFINQMAFDDDIVVWKSLLASCKTHG 558
++N+ +P +C++D+ A+ G + +A F N MA ++ V W SL+ HG
Sbjct: 502 YALRNQQNAVPLFV-SNCLIDMYAKCGSISDARLVFDNMMAKNE--VTWTSLMTGYGMHG 558
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFD-LFSSLCKQNLYNEAL-VAFDFLQNNTNFR 77
D + C +D A + DS + D+ + + + N+AL + + + + R
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 78 IRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAV---LHNHILNMYGKCGSLEDA 134
T + + AC+SL +L++G+++H + L + Q +AV + N +++MY KCGS+ DA
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACS 192
R+VFD M +N V+WT+++ G +G A+ ++ +M + G D T ++ ACS
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 332 bits (852), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 305/581 (52%), Gaps = 66/581 (11%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+ +++ + SL LG++VH L + N ++NMY K AR VFD M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLC-CVGLG 200
+R+++SW ++IAG +QNG E A+ L++Q+L+ GL PDQ+T S+++A S L + L
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H H IK + S ALI Y++ +R + +
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEIL--------------------- 474
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
F R F+ L +WN ++AG + ++ + LF+ M + D T+ ++ C
Sbjct: 475 -FERHNFD------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 321 TSPLSLYQGMQIHSYIIKKGF--------------------------YSNVPVCN----- 349
++ QG Q+H+Y IK G+ + ++PV +
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 350 -----AILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKT 404
I + F +FS M PD T + A + + +LE G Q+H +K
Sbjct: 588 TMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL 647
Query: 405 GLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLF 464
D FV L+DMY KCGS+ A LF +E ++ +W++++VG AQ G G+E L+LF
Sbjct: 648 NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLF 707
Query: 465 RRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
++M+S G++P+ VT +GVL+ACSH GLV E + R M +YGI P E SC+ D L R
Sbjct: 708 KQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGR 767
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG V +AE+ I M+ + ++++LLA+C+ G+ + GKR A +L+++P +S+A VLL
Sbjct: 768 AGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLL 827
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N+YA++ KW+E+ MK V+K PG SWIE++ KIH
Sbjct: 828 SNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 153/609 (25%), Positives = 263/609 (43%), Gaps = 95/609 (15%)
Query: 40 RRFDDIWDFDLFS-----------SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
R FD + D DL S S C +A + F L+ + + R T + ++
Sbjct: 95 RVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSR-MTLSPMLK 153
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
C + H + D + ++N+Y K G +++ +++F+EMP R+VV
Sbjct: 154 LCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVL 213
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA------------------ 190
W M+ + G + AI+L SGL P++ T + R
Sbjct: 214 WNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGND 273
Query: 191 CSGLCCV-----GLGRQLH-----------AHVIKSEHGSHLISQNALIAMYTKFDRILD 234
S + + GL LH A +++S+ ++ ++A K D +
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 235 AWNVFSSIARKD----ITSWGSMIDGFSKL---DFARTVFNEMESPNLASWNTIIAGVAS 287
V + +T S+I+ + KL FARTVF+ M +L SWN++IAG+A
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS-PLSLYQGMQIHSYIIKKGFYSNVP 346
EA+ LF ++ L PD T+ S+L A +S P L Q+H + IK S+
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 347 VCNAIL-----------------------------------QHQAGELFRLFSLMLASQT 371
V A++ H + +LF+LM
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 372 KPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARE 431
+ D T V C + ++ G Q+H Y +K+G LD++V +G++DMYVKCG + +A+
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 432 LFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGL 491
F+ + PD V+W+++I G + G E A +F +MR GV P+ T+ + A S +
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 492 VEEGLQLYRIMQNEYGIIPTRER--RSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKS 549
+E+G Q++ N + T + + +VD+ A+ G + +A ++ +I W +
Sbjct: 634 LEQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNA 689
Query: 550 LLASCKTHG 558
+L HG
Sbjct: 690 MLVGLAQHG 698
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 219/472 (46%), Gaps = 51/472 (10%)
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
L LG+ H IL+ + P+ L N++++MY KCGSL AR VFD+MP R++VSW +++A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 156 CSQNGQ---EN--AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
+Q+ + EN A L+ + Q + + T +++ C V H + K
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
AL+ +Y KF ++ + +F + +D+ W M+ + ++ F
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE------ 228
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGM 330
EA+ L S L P+ +T+R LL + S
Sbjct: 229 ----------------------EAIDLSSAFHSSGLNPNEITLR-LLARISGDDS--DAG 263
Query: 331 QIHSYI-------IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
Q+ S+ + + + N + + Q L + F+ M+ S + D +TF ++
Sbjct: 264 QVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLA 323
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+ SL +G Q+HC +K GL L + V N L++MY K G AR +F+ M + D++S
Sbjct: 324 TAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS 383
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYR--- 500
W+S+I G AQ G EA+ LF ++ G++P+ T+ VL A S + EGL L +
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVH 440
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+ + + + ++D +R + EAE + F D+V W +++A
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 149/348 (42%), Gaps = 68/348 (19%)
Query: 78 IRPSTYA--DLISACSSL-RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
++P Y ++ A SSL L L ++VH H + D+ + +++ Y + +++A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
++F E ++V+W AM+AG +Q+ + ++L+ M + G D FT ++ + C L
Sbjct: 472 EILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
+ G+Q+HA+ IKS + L + ++ MY K + A F SI D +W
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW---- 586
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
T+I+G A +FS+M ++PD T+
Sbjct: 587 ------------------------TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKG-------------FYS------------------ 343
+L A + +L QG QIH+ +K Y+
Sbjct: 623 TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 344 NVPVCNAIL----QHQAG-ELFRLFSLMLASQTKPDHITFNDVMGACA 386
N+ NA+L QH G E +LF M + KPD +TF V+ AC+
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+ L +G H I+ + F++N L+ MY KCGSL AR +F+ M D D+VSW+S++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 449 VGYAQFG-CG----EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLV--EEGLQLYRI 501
YAQ C ++A LFR +R V + +TL +L C H G V E Y
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+ G+ +V++ + G+V E + +M + D+V+W +L +
Sbjct: 173 ---KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKA 220
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 316/626 (50%), Gaps = 85/626 (13%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDA 115
+ NL + AL F +Q N + S YA ++ +C++L L+LG ++H H L S D
Sbjct: 258 QNNLLSLALKFFKEMQK-VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG 316
Query: 116 VLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
++ L+MY KC +++DA+++FD N S+ AMI G SQ A+ L+ +++ S
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
GL D+ + + RAC+ + + G Q++ IKS + NA I MY K + +A
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+ VF + R+D S WN IIA E +
Sbjct: 437 FRVFDEMRRRDAVS----------------------------WNAIIAAHEQNGKGYETL 468
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACT---------------------------SPLSLY- 327
LF M + PD T S+L ACT S + +Y
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 328 ------QGMQIHSYIIKKGFYS---------------------NVPVCNAILQHQAGELF 360
+ +IHS ++ S N + +++ Q+ +
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
LF+ M+ PD T+ V+ CA +AS +G Q+H ++K L DV++ + L+DMY
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLV 480
KCG L +R +F D V+W+++I GYA G GEEA++LF RM ++PNHVT +
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708
Query: 481 GVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF 540
+L AC+H+GL+++GL+ + +M+ +YG+ P S +VD+L ++G+V A + I +M F
Sbjct: 709 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 768
Query: 541 DDDIVVWKSLLASCKTH-GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVAR 599
+ D V+W++LL C H NV+V + A +L++DP +S+A LL N+YA +G WE+V+
Sbjct: 769 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 828
Query: 600 LMGSMKERGVRKVPGQSWIEIQTKIH 625
L +M+ ++K PG SW+E++ ++H
Sbjct: 829 LRRNMRGFKLKKEPGCSWVELKDELH 854
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/566 (25%), Positives = 253/566 (44%), Gaps = 99/566 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T+A ++ CS L LG ++H ++ C D V + +L+MY K ++ VF +
Sbjct: 182 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGR 201
P++N VSW+A+IAGC QN + A++ + +M + Q + S++R+C+ L + LG
Sbjct: 242 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 301
Query: 202 QLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
QLHAH +KS+ + I + A + MY K D + DA
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA-------------------------- 335
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
+ +F+ E+ N S+N +I G + + +A+ LF + L D +++ + AC
Sbjct: 336 --QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ-----HQAGELFR--------------- 361
L +G+QI+ IK +V V NA + E FR
Sbjct: 394 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 362 ----------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
LF ML S+ +PD TF ++ AC SL G ++H I+K+G
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG 512
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFN-FMEDPDV-------------------VSWS 445
+A + V L+DMY KCG + A ++ + F + +V VSW+
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 446 SLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-----R 500
S+I GY E+A LF RM G+ P+ T VL C+++ G Q++ +
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 632
Query: 501 IMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNV 560
+Q++ I T +VD+ ++ G +H++ + + + D V W +++ HG
Sbjct: 633 ELQSDVYICST------LVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 561 DVGKRAAENIL--KIDPTNSAALVLL 584
+ + E ++ I P + + +L
Sbjct: 686 EEAIQLFERMILENIKPNHVTFISIL 711
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 241/511 (47%), Gaps = 57/511 (11%)
Query: 68 DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
DFL N N + + ++ + C+ +L+LG++ H H++ S +P + N +L +Y
Sbjct: 38 DFL-NQVN-SVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 128 CGSLEDARMVFDEMP-------------------------------QRNVVSWTAMIAGC 156
A MVFD+MP R+VVSW +M++G
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 157 SQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
QNG+ +IE++V M + G+ D TF I++ CS L LG Q+H V++ + +
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESP 273
++ +AL+ MY K R +++ VF I K+ SW ++I G + L A F EM+
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 274 NLASWNTIIAGV-ASCSNANE---AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY-- 327
N +I A V SC+ +E L + + DG+ VR T+ L +Y
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VR------TATLDMYAK 328
Query: 328 -QGMQIHSYIIKKGFYSNVPVCNAIL----QHQAG-ELFRLFSLMLASQTKPDHITFNDV 381
MQ + N NA++ Q + G + LF +++S D I+ + V
Sbjct: 329 CDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 388
Query: 382 MGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
ACA + L G Q++ +K+ L+LDV V N +DMY KC +L A +F+ M D
Sbjct: 389 FRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA 448
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
VSW+++I + Q G G E L LF M S + P+ T +L AC+ G + G++++
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 507
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
+ G+ ++D+ ++ G + EAE
Sbjct: 508 IVKS-GMASNSSVGCSLIDMYSKCGMIEEAE 537
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 39/262 (14%)
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
F F+ L F+ V CA +LE+G Q H +++ +G FV+N L+ +
Sbjct: 33 FSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQV 92
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYA--------------------------- 452
Y SA +F+ M DVVSW+ +I GY+
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 453 ----QFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGI 508
Q G +++++F M G+ + T +L CS + G+Q++ I+ G
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV-RVGC 211
Query: 509 IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
S ++D+ A+ R E+ + + + V W +++A C + + + + +
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 569 NILKIDPTNSAALVLLCNIYAS 590
+ K++ S + IYAS
Sbjct: 271 EMQKVNAGVSQS------IYAS 286
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 298/530 (56%), Gaps = 41/530 (7%)
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF + + N++ W M G + + +A++LYV M+ GL+P+ +TF ++++C+
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G+Q+H HV+K L +LI+MY + R+ DA VF +D+ S+ ++I G
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 257 FSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
++ ++ A+ +F+E+ ++ SWN +I+G A N EA+ LF +M + PD T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--LQHQAGEL------------ 359
+++ AC S+ G Q+H +I GF SN+ + NA+ L + GEL
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 360 ----------------------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQL 397
LF ML S P+ +T ++ ACA + ++++G +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 398 HCYIMK--TGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H YI K G+ + L+DMY KCG + +A ++FN + + SW+++I G+A G
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
+ + LF RMR G++P+ +T VG+L+ACSH G+++ G ++R M +Y + P E
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
C++DLL +G EAE+ IN M + D V+W SLL +CK HGNV++G+ AEN++KI+P
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 569
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
N + VLL NIYAS+G+W EVA+ + ++G++KVPG S IEI + +H
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 174/362 (48%), Gaps = 51/362 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD-- 139
T+ ++ +C+ ++ + G+++H H+L C D +H +++MY + G LEDA VFD
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 140 -----------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
E+P ++VVSW AMI+G ++ G A+EL+
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
M+++ + PD+ T +++ AC+ + LGRQ+H + GS+L NALI +Y+K
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDF---ARTVFNEM----ESPNLASWNTIIA 283
+ A +F + KD+ SW ++I G++ ++ A +F EM E+PN + +I+
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY-------QGMQIHSYI 336
A + + + D+ L G+T S L TS + +Y Q+ + I
Sbjct: 376 ACAHLGAIDIGRWIHVYI-DKRL--KGVTNASSL--RTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 337 IKKGFYS-NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
+ K S N + + +A F LFS M +PD ITF ++ AC+ L++G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 396 QL 397
+
Sbjct: 491 HI 492
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 172/378 (45%), Gaps = 54/378 (14%)
Query: 35 VDSFLRRFDDI-------WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+++ + FD+I W+ + S + Y EAL F + TN R ST ++
Sbjct: 216 IENAQKLFDEIPVKDVVSWN-AMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVV 273
Query: 88 SACSSLRSLQLGRKVH----DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
SAC+ S++LGR+VH DH S + + N ++++Y KCG LE A +F+ +P
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLK----IVNALIDLYSKCGELETACGLFERLPY 329
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
++V+SW +I G + A+ L+ +ML+SG P+ T SI+ AC+ L + +GR +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 204 HAHVIKSEHGSHLIS--QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLD 261
H ++ K G S + +LI MY K I A VF+SI K ++SW +MI GF
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF---- 445
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
A A+ + LFS M + PD +T LL AC+
Sbjct: 446 ------------------------AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 322 SPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHI 376
L G I + + Y P C L +G ++ + +PD +
Sbjct: 482 HSGMLDLGRHIFRTMTQD--YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 377 TFNDVMGACAAMASLEMG 394
+ ++ AC ++E+G
Sbjct: 540 IWCSLLKACKMHGNVELG 557
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 385 CAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYV---KCGSLGSARELFNFMEDPDV 441
C + SL + +H ++K GL + ++ L++ + L A +F +++P++
Sbjct: 43 CKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 442 VSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRI 501
+ W+++ G+A ALKL+ M S G+ PN T VL +C+ +EG Q++
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 502 MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
+ + G + ++ + + GR+ +A ++ + D+V + +L+ + G ++
Sbjct: 160 VL-KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK-SPHRDVVSYTALIKGYASRGYIE 217
Query: 562 VGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQS 616
++ + I D + A++ + YA +G ++E L M + VR P +S
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMI---SGYAETGNYKEALELFKDMMKTNVR--PDES 267
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C ++ A +V +S L + W+ +F ++ A +FD I+
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF----AMHGRADASFDLFSRMRKIGIQ 467
Query: 80 PS--TYADLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARM 136
P T+ L+SACS L LGR + + K P + ++++ G G ++A
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 137 VFDEMPQR-NVVSWTAMIAGCSQNGQ 161
+ + M + V W +++ C +G
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGN 553
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 197/616 (31%), Positives = 320/616 (51%), Gaps = 65/616 (10%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSS 109
L KQ ++EA+ + + + T+ ++ C + L G++VH H++
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY 225
Query: 110 KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELY 169
+ D + N ++ MY KCG ++ AR++FD MP+R+++SW AMI+G +NG + +EL+
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
M + PD T S+I AC L LGR +HA+VI + + N+L MY
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCS 289
+A +FS + RKDI SW +MI G+ +N +
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYE--------YNFL------------------- 378
Query: 290 NANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN 349
++A+ + M + PD +TV ++L AC + L G+++H IK S V V N
Sbjct: 379 -PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 350 AILQ--------HQAGELF----------------------RLF-SLMLASQTK----PD 374
++ +A ++F R F +L+ Q K P+
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPN 497
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
IT + ACA + +L G ++H ++++TG+ LD F+ N L+DMYV+CG + +A FN
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ DV SW+ L+ GY++ G G ++LF RM S VRP+ +T + +L CS +V +
Sbjct: 558 -SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQ 616
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
GL + M+ +YG+ P + +CVVDLL RAG + EA FI +M D VW +LL +C
Sbjct: 617 GLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H +D+G+ +A++I ++D + +LLCN+YA GKW EVA++ MKE G+ G
Sbjct: 676 RIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAG 735
Query: 615 QSWIEIQTKIHASGND 630
SW+E++ K+HA +D
Sbjct: 736 CSWVEVKGKVHAFLSD 751
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 156/577 (27%), Positives = 262/577 (45%), Gaps = 84/577 (14%)
Query: 54 LCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
LC EA+ + +Q + + L+ C R+ + G KV+ LSS
Sbjct: 69 LCANGKLEEAMKLLNSMQE-LRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
L N L M+ + G+L DA VF +M +RN+ SW ++ G ++ G + A+ LY +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 174 Q-SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRI 232
G+ PD +TF ++R C G+ + G+++H HV++ + + NALI MY K +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 233 LDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNAN 292
A +F + R+DI SW +MI G+ + N M +
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFE--------NGM--------------------CH 279
Query: 293 EAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL 352
E + LF M + PD +T+ S++ AC G IH+Y+I GF ++ VCN++
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 353 Q--------HQAGELFR----------------------------LFSLMLASQTKPDHI 376
Q +A +LF + +M KPD I
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 377 TFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFM 436
T V+ ACA + L+ G +LH +K L V V N L++MY KC + A ++F+ +
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459
Query: 437 EDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGL 496
+V+SW+S+I G EAL R+M+ + ++PN +TL L AC+ +G + G
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGK 518
Query: 497 QLY-RIMQNEYGI---IPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLA 552
+++ +++ G+ +P + ++D+ R GR++ A N D+ W LL
Sbjct: 519 EIHAHVLRTGVGLDDFLP-----NALLDMYVRCGRMNTAWSQFNSQK--KDVTSWNILLT 571
Query: 553 SCKTHGN----VDVGKRAAENILKIDPTNSAALVLLC 585
G V++ R ++ ++ P + LLC
Sbjct: 572 GYSERGQGSMVVELFDRMVKS--RVRPDEITFISLLC 606
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 198/446 (44%), Gaps = 79/446 (17%)
Query: 153 IAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEH 212
+ G NG+ A++L M + + D+ F +++R C G ++++ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 213 GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMES 272
+ NA +AM+ +F ++DAW VF ++ +++ SW ++ G++K +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY---------- 175
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEM---GDRELIPDGLTVRSLLCACTSPLSLYQG 329
+EAM L+ M G + PD T +L C L +G
Sbjct: 176 ------------------FDEAMCLYHRMLWVGG--VKPDVYTFPCVLRTCGGIPDLARG 215
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQAG-------------------------------- 357
++H ++++ G+ ++ V NA++
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 358 ----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
E LF M PD +T V+ AC + +G +H Y++ TG A+D+ V
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
N L MY+ GS A +LF+ ME D+VSW+++I GY ++A+ +R M V+
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQN----EYGIIPTRERRSCVVDLLARAGRVH 529
P+ +T+ VL+AC+ +G ++ G++L+++ Y I+ ++++ ++ +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LINMYSKCKCID 450
Query: 530 EAEDFINQMAFDDDIVVWKSLLASCK 555
+A D + + +++ W S++A +
Sbjct: 451 KALDIFHNIP-RKNVISWTSIIAGLR 475
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 41/290 (14%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E +L + M + D F ++ C + E G++++ + + +L V + N +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-SSGVRPNH 476
M+V+ G+L A +F M + ++ SW+ L+ GYA+ G +EA+ L+ RM GV+P+
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 477 VTLVGVLTACS-----------HVGLVEEGLQLYRIMQNE-----------------YGI 508
T VL C HV +V G +L + N +
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 509 IPTRERRS--CVVDLLARAGRVHEAEDFINQM---AFDDDIVVWKSLLASCKTHGNVDVG 563
+P R+ S ++ G HE + M + D D++ S++++C+ G+ +G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 564 KRAAENILKIDPTNSAALVLLCN----IYASSGKWEEVARLMGSMKERGV 609
+ ++ T A + +CN +Y ++G W E +L M+ + +
Sbjct: 317 RDIHAYVI---TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/659 (30%), Positives = 326/659 (49%), Gaps = 77/659 (11%)
Query: 6 FFICHLPRWCCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALV 65
FF L C Y +D+A V + + + ++ + K + ++AL
Sbjct: 70 FFQTKLVSLFCRYGS-------VDEAARVFEPIDSKLNVLYH-TMLKGFAKVSDLDKALQ 121
Query: 66 AFDFLQNNTNFRIRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
F ++ + + P Y L+ C L++G+++H ++ S D + N
Sbjct: 122 FFVRMRYDD---VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
MY KC + +AR VFD MP+R++VSW ++AG SQNG A+E+ M + L P T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
S++ A S L + +G+++H + ++S S + AL+ MY K
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK--------------- 283
Query: 244 RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
GS L+ AR +F+ M N+ SWN++I N EAM +F +M D
Sbjct: 284 ------CGS-------LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 304 RELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQ 355
+ P ++V L AC L +G IH ++ G NV V N+++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 356 AGELF----------------------------RLFSLMLASQTKPDHITFNDVMGACAA 387
A +F FS M + KPD T+ V+ A A
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 388 MASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSL 447
++ +H +M++ L +VFV L+DMY KCG++ AR +F+ M + V +W+++
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 448 IVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
I GY G G+ AL+LF M+ ++PN VT + V++ACSH GLVE GL+ + +M+ Y
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
I + + +VDLL RAGR++EA DFI QM + V+ ++L +C+ H NV+ ++AA
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 568 ENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
E + +++P + VLL NIY ++ WE+V ++ SM +G+RK PG S +EI+ ++H+
Sbjct: 631 ERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHS 689
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 237/524 (45%), Gaps = 78/524 (14%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+ CSSL+ L R++ + + + +++++ + GS+++A VF+ +
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ V + M+ G ++ + A++ +V+M + P + F +++ C + +G+++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H ++KS L + L MY K ++ +A VF + +D+ SW +++ G+S+ A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
R A+ + M + L P +T+ S+L A ++
Sbjct: 218 RM----------------------------ALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR-------------- 361
+ G +IH Y ++ GF S V + A++ A +LF
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 362 --------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
+F ML KP ++ + ACA + LE G +H ++ GL
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
+V V+N L+ MY KC + +A +F ++ +VSW+++I+G+AQ G +AL F +M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 468 RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQN---EYGIIPTRERRSCVVDLLAR 524
RS V+P+ T V V+TA + + + ++ ++ + + T + +VD+ A+
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT----TALVDMYAK 485
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAE 568
G + A + M+ + + W +++ THG GK A E
Sbjct: 486 CGAIMIARLIFDMMS-ERHVTTWNAMIDGYGTHG---FGKAALE 525
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 301/609 (49%), Gaps = 71/609 (11%)
Query: 56 KQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQP 113
++ LY++A+ F + + + P TY + A L+S++LG VH IL S
Sbjct: 92 REGLYHDAISVFIRMVSE-GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR 150
Query: 114 DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML 173
D + N +L MY G +E AR VFD M R+V+SW MI+G +NG N A+ ++ M+
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 174 QSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRIL 233
+ D T S++ C L + +GR +H V + G + +NAL+ MY K R
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR-- 268
Query: 234 DAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANE 293
+D AR VF+ ME ++ +W +I G +
Sbjct: 269 --------------------------MDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 302
Query: 294 AMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ 353
A+ L M + P+ +T+ SL+ C L + G +H + +++ YS++ + +++
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 354 HQA------------------------------------GELFRLFSLMLASQTKPDHIT 377
A + LF M +P+ T
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
N ++ A AA+A L +HCY+ KTG + GL+ +Y KCG+L SA ++FN ++
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 438 DP----DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
+ DVV W +LI GY G G AL++F M SGV PN +T L ACSH GLVE
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 542
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
EGL L+R M Y + +C+VDLL RAGR+ EA + I + F+ VW +LLA+
Sbjct: 543 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C TH NV +G+ AA + +++P N+ VLL NIYA+ G+W+++ ++ M+ G+RK P
Sbjct: 603 CVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKP 662
Query: 614 GQSWIEIQT 622
G S IEI++
Sbjct: 663 GHSTIEIRS 671
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ ++ AA S+ LHC+++ TG + +++ L Y CG + AR+LF M
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR--PNHVTLVGVLTACSHVGLVEEG 495
++S++ +I Y + G +A+ +F RM S GV+ P+ T V A + ++ G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 496 LQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
L ++ RI+++ +G + ++ ++ + G+V A D + M + D++ W ++++
Sbjct: 137 LVVHGRILRSWFG--RDKYVQNALLAMYMNFGKVEMARDVFDVMK-NRDVISWNTMISGY 193
Query: 555 KTHG 558
+G
Sbjct: 194 YRNG 197
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/648 (30%), Positives = 334/648 (51%), Gaps = 88/648 (13%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISAC 90
+V D R W+ L SSLC + AL AF + + + PS++ +++AC
Sbjct: 154 KVFDRISERNQVSWN-SLISSLCSFEKWEMALEAFRCMLDEN---VEPSSFTLVSVVTAC 209
Query: 91 SSL---RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVV 147
S+L L +G++VH + L K + ++ + N ++ MYGK G L ++++ R++V
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
+W +++ QN Q A+E +M+ G+ PD+FT S++ ACS L + G++LHA+
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 208 IKSEH-GSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+K+ + +AL+ MY ++L R V
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSG----------------------------RRV 360
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE-LIPDGLTVRSLLCACTSPLS 325
F+ M + WN +IAG + + EA+ LF M + L+ + T+ ++ AC +
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAIL--------------------------------- 352
+ IH +++K+G + V N ++
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 353 ----QHQAGELFRLFSLMLASQT----------KPDHITFNDVMGACAAMASLEMGTQLH 398
+H L L + + KP+ IT ++ +CAA+++L G ++H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
Y +K LA DV V + L+DMY KCG L +R++F+ + +V++W+ +I+ Y G G+
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
EA+ L R M GV+PN VT + V ACSH G+V+EGL+++ +M+ +YG+ P+ + +CV
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 519 VDLLARAGRVHEAEDFINQMAFD-DDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTN 577
VDLL RAGR+ EA +N M D + W SLL + + H N+++G+ AA+N+++++P
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 578 SAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
++ VLL NIY+S+G W++ + +MKE+GVRK PG SWIE ++H
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 768
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/572 (25%), Positives = 256/572 (44%), Gaps = 95/572 (16%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVH 103
W DL S + NL EA++ + + I+P YA L+ A + L+ ++LG+++H
Sbjct: 64 WWIDLLRSKVRSNLLREAVLTY---VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIH 120
Query: 104 DHILSSKCQPDAV-LHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
H+ D+V + N ++N+Y KCG VFD + +RN VSW ++I+ +
Sbjct: 121 AHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 180
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC---VGLGRQLHAHVI-KSEHGSHLIS 218
A+E + ML + P FT S++ ACS L + +G+Q+HA+ + K E S +I
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII- 239
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASW 278
N L+AMY K ++ + + S +D L +W
Sbjct: 240 -NTLVAMYGKLGKLASSKVLLGSFGGRD----------------------------LVTW 270
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
NT+++ + EA+ EM + PD T+ S+L AC+ L G ++H+Y +K
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 339 KG--------------------------------FYSNVPVCNAIL------QHQAGELF 360
G F + + NA++ +H L
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 361 RLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMY 420
+ ++ + T V+ AC + +H +++K GL D FV N LMDMY
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 421 VKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR------SSG--- 471
+ G + A +F MED D+V+W+++I GY E+AL L +M+ S G
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 472 --VRPNHVTLVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAGR 527
++PN +TL+ +L +C+ + + +G ++ Y I N + S +VD+ A+ G
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV---GSALVDMYAKCGC 567
Query: 528 VHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+ + +Q+ +++ W ++ + HGN
Sbjct: 568 LQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 311/566 (54%), Gaps = 22/566 (3%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHI--LSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+ L+ C+ +VH L P + N +L Y + L+ A ++F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
E+P+++ V++ +I G ++G +I L+++M QSG P FTF +++A GL L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
G+QLHA + + N ++ Y+K DR+L+ +F + D S+ +I +S+
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 260 LDFART---VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
D F EM+ N A + S + ++ + ++ + L+ T S+
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA---TADSI 385
Query: 317 LCACTSPLSLY-------QGMQIHSYIIKKGFYSNVPVCNAILQ---HQAGELFRLFSLM 366
L S + +Y + I + ++ S + + +Q H AG +LF+ M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG--LKLFTKM 443
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
S + D TF V+ A A+ ASL +G QLH +I+++G +VF +GL+DMY KCGS+
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A ++F M D + VSW++LI +A G GE A+ F +M SG++P+ V+++GVLTAC
Sbjct: 504 KDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
SH G VE+G + ++ M YGI P ++ +C++DLL R GR EAE +++M F+ D ++
Sbjct: 564 SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDP-TNSAALVLLCNIYASSGKWEEVARLMGSMK 605
W S+L +C+ H N + +RAAE + ++ ++AA V + NIYA++G+WE+V + +M+
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMR 683
Query: 606 ERGVRKVPGQSWIEIQTKIHA-SGND 630
ERG++KVP SW+E+ KIH S ND
Sbjct: 684 ERGIKKVPAYSWVEVNHKIHVFSSND 709
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 173/359 (48%), Gaps = 50/359 (13%)
Query: 42 FDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD++ + D + SS + + Y +L F +Q F R +A ++S ++L S
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC-MGFDRRNFPFATMLSIAANLSS 366
Query: 96 LQLGRKVHDHILSSKCQPDAVLH--NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
LQ+GR++H L + D++LH N +++MY KC E+A ++F +PQR VSWTA+I
Sbjct: 367 LQMGRQLHCQALLATA--DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
+G Q G A ++L+ +M S L DQ TF ++++A + + LG+QLHA +I+S +
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
++ S + L+ MY K I DA VF EM
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVF----------------------------EEMPDR 516
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ-- 331
N SWN +I+ A + A+ F++M + L PD +++ +L AC+ + QG +
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 332 -----IHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGAC 385
I+ KK Y+ C L + G LM +PD I ++ V+ AC
Sbjct: 577 QAMSPIYGITPKKKHYA----CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 631
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 217/501 (43%), Gaps = 74/501 (14%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
RKV+D + + V N +++ + K G + AR +FD MP R VV+WT ++ ++
Sbjct: 67 ARKVYDEM----PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122
Query: 159 NGQENAAIELYVQMLQSG--LMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK--SEHGS 214
N + A +L+ QM +S +PD TF +++ C+ Q+HA +K +
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
L N L+ Y + R+ A +F I KD ++ ++I G+ K
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK--------------- 227
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
G+ + E++ LF +M P T +L A G Q+H+
Sbjct: 228 --------DGLYT-----ESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 335 YIIKKGFYSNVPVCNAIL----QH-----------QAGEL-FRLFSLMLASQTKPD---- 374
+ GF + V N IL +H + EL F ++++++S ++ D
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 375 ----------------HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
+ F ++ A ++SL+MG QLHC + + V N L+D
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
MY KC A +F + VSW++LI GY Q G LKLF +MR S +R + T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 479 LVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQM 538
VL A + + G QL+ + G + S +VD+ A+ G + +A +M
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 539 AFDDDIVVWKSLLASCKTHGN 559
D + V W +L+++ +G+
Sbjct: 514 P-DRNAVSWNALISAHADNGD 533
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 318 bits (815), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 304/612 (49%), Gaps = 70/612 (11%)
Query: 53 SLCKQNLYNEALVAFDFLQ--NNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSK 110
SL K NEA F+FLQ + + +Y L AC LRSL GR +HD +
Sbjct: 57 SLSKHRKLNEA---FEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGI 113
Query: 111 CQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYV 170
P +L N +L MY +C SLEDA +FDEM + N VS T MI+ ++ G + A+ L+
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 171 QMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFD 230
ML SG P + +++++ + GRQ+HAHVI++ S+ + ++ MY K
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSN 290
++ A VF +A K + ++ G+++ AR
Sbjct: 234 WLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRAR-------------------------- 267
Query: 291 ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV--- 347
+A+ LF ++ + D +L AC S L G QIH+ + K G S V V
Sbjct: 268 --DALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTP 325
Query: 348 --------------CNAILQ-------------------HQAGELFRLF-SLMLASQTKP 373
C A + Q E + F SL + +
Sbjct: 326 LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
Query: 374 DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELF 433
+ T+ + AC+ +A +G Q+H +K L + + L+ MY KCG L A E+F
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVF 445
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
M++PD+V+W++ I G+A +G EAL+LF +M S G++PN VT + VLTACSH GLVE
Sbjct: 446 ESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVE 505
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLAS 553
+G M +Y + PT + C++D+ AR+G + EA F+ M F+ D + WK L+
Sbjct: 506 QGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Query: 554 CKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVP 613
C TH N+++G+ A E + ++DP ++A VL N+Y +GKWEE A +M M ER ++K
Sbjct: 566 CWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKEL 625
Query: 614 GQSWIEIQTKIH 625
SWI+ + KIH
Sbjct: 626 SCSWIQEKGKIH 637
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 34/250 (13%)
Query: 39 LRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQL 98
+R +D+ + S C+ + + EA+ F L++ + TY + ACS L +
Sbjct: 346 IREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI 405
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
G +VH + + ++ MY KCG L+DA VF+ M ++V+WTA I+G +
Sbjct: 406 GGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAY 465
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLIS 218
G + A+ L+ +M+ G+ P+ TF +++ ACS HA ++ E G H +
Sbjct: 466 YGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS-----------HAGLV--EQGKHCL- 511
Query: 219 QNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEME-SPN 274
D +L +NV +I D MID +++ LD A M P+
Sbjct: 512 -----------DTMLRKYNVAPTIDHYDC-----MIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 275 LASWNTIIAG 284
SW ++G
Sbjct: 556 AMSWKCFLSG 565
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 318 bits (814), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 318/624 (50%), Gaps = 67/624 (10%)
Query: 44 DIWDFDL-FSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKV 102
DI ++++ SS + NEAL F + R +Y +IS +L RK+
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP-----RWSSVSYNGMISGYLRNGEFELARKL 117
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
D + + D V N ++ Y + +L AR +F+ MP+R+V SW M++G +QNG
Sbjct: 118 FDEM----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 163 NAAIELYVQMLQ------SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHL 216
+ A ++ +M + + L+ + AC + KS L
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC--------------MLFKSRENWAL 219
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS---KLDFARTVFNEMESP 273
+S N L+ + K +I++A F S+ +D+ SW ++I G++ K+D AR +F+E
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIP---------------------DGLT 312
++ +W +++G EA LF +M +R + D +
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQAG---ELFRL 362
R++ T Q +I K + +P + + Q+G E RL
Sbjct: 340 CRNVSTWNTMITGYAQCGKISE---AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 363 FSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVK 422
F M + + +F+ + CA + +LE+G QLH ++K G FV N L+ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 423 CGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGV 482
CGS+ A +LF M D+VSW+++I GY++ G GE AL+ F M+ G++P+ T+V V
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 483 LTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD 542
L+ACSH GLV++G Q + M +YG++P + +C+VDLL RAG + +A + + M F+
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 543 DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMG 602
D +W +LL + + HGN ++ + AA+ I ++P NS VLL N+YASSG+W +V +L
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 603 SMKERGVRKVPGQSWIEIQTKIHA 626
M+++GV+KVPG SWIEIQ K H
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHT 660
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 379 NDVMGACAAMASLEMGTQLHCYIMKTGLAL-----DVFVMNGLMDMYVKCGSLGSARELF 433
N+ GA A SL+ TQ +T L D+ N + Y++ G A +F
Sbjct: 29 NNAHGA-ANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVF 87
Query: 434 NFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVE 493
M VS++ +I GY + G E A KLF M + +V + G + ++G
Sbjct: 88 KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRN-RNLGKAR 146
Query: 494 EGLQLYRIMQNEYGIIPTRERRSCVVDLL----ARAGRVHEAEDFINQMAFDDDIVVWKS 549
E L+ IM ER C + + A+ G V +A ++M +D V W +
Sbjct: 147 E---LFEIMP---------ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND-VSWNA 193
Query: 550 LLAS 553
LL++
Sbjct: 194 LLSA 197
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 318 bits (814), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 197/629 (31%), Positives = 316/629 (50%), Gaps = 73/629 (11%)
Query: 42 FDDIWDFDLFS--SLCKQ----NLYNEALVAFDFLQNNTNFRIRPST--YADLISACSSL 93
FD + D+ S S+ K+ N +EAL+ F ++ + + P T + ++ AC
Sbjct: 63 FDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRV-VDHAVSPDTSVLSVVLKACGQS 121
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMI 153
++ G +H + + + + + +L+MY + G ++ + VF EMP RN V+WTA+I
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 154 AGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G G+ + + +M +S + D +TF ++AC+GL V G+ +H HVI
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV 241
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ L N+L MYT+ G M DG +F M
Sbjct: 242 TTLCVANSLATMYTE---------------------CGEMQDGL-------CLFENMSER 273
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
++ SW ++I +A+ F +M + ++ P+ T S+ AC S L G Q+H
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 334 SYIIKKGFYSNVPVCNAILQH---------------------------------QAG--- 357
++ G ++ V N++++ QAG
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
E F+ FS M S TKP ++ MA +E G Q+H + GL + V + L+
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLI 453
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
+MY KCGS+ A +F + D+VS +++I GYA+ G +EA+ LF + G RP+ V
Sbjct: 454 NMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSV 513
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
T + VLTAC+H G ++ G + +MQ Y + P +E C+VDLL RAGR+ +AE IN+
Sbjct: 514 TFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINE 573
Query: 538 MAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEV 597
M++ D VVW +LL +CK G+++ G+RAAE IL++DPT + ALV L NIY+S+G EE
Sbjct: 574 MSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEA 633
Query: 598 ARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
A + +MK +GV K PG S I+I+ + A
Sbjct: 634 ANVRKNMKAKGVIKEPGWSSIKIKDCVSA 662
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 211/483 (43%), Gaps = 68/483 (14%)
Query: 129 GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQM--LQSGLMPDQFTFGS 186
G+L AR VFD+MP ++VSWT++I + A+ L+ M + + PD
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 187 IIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKD 246
+++AC + G LHA+ +K+ S + ++L+ MY + +I + VFS
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFS------ 167
Query: 247 ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDREL 306
EM N +W II G+ E ++ FSEM E
Sbjct: 168 ----------------------EMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEE 205
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCN--AILQHQAGEL----- 359
+ D T L AC + G IH+++I +GF + + V N A + + GE+
Sbjct: 206 LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC 265
Query: 360 -----------------------------FRLFSLMLASQTKPDHITFNDVMGACAAMAS 390
F M SQ P+ TF + ACA+++
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 391 LEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVG 450
L G QLHC ++ GL + V N +M MY CG+L SA LF M D++SWS++I G
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 451 YAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
Y Q G GEE K F MR SG +P L +L+ ++ ++E G Q++ + +G+
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALC-FGLEQ 444
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
RS ++++ ++ G + EA + DDIV +++ HG E
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETD-RDDIVSLTAMINGYAEHGKSKEAIDLFEKS 503
Query: 571 LKI 573
LK+
Sbjct: 504 LKV 506
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR-- 468
F N + + G+L +AR++F+ M D+VSW+S+I Y +EAL LF MR
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVE--EGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG 526
V P+ L VL AC + E L Y + + ++ + S ++D+ R G
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAV---KTSLLSSVYVGSSLLDMYKRVG 157
Query: 527 RVHEAEDFINQMAFDDDIVVWKSLL 551
++ ++ ++M F + V W +++
Sbjct: 158 KIDKSCRVFSEMPF-RNAVTWTAII 181
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 304/582 (52%), Gaps = 71/582 (12%)
Query: 86 LISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
L+ S S++LGR VH I+ + P L N+++NMY K E AR+V P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
NVVSWT++I+G +QNG + A+ + +M + G++P+ FTF +A + L G+Q+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
A +K RILD VF + D+ + D AR
Sbjct: 132 ALAVKC-------------------GRILD---VFVGCSAFDMYCKTRLRDD------AR 163
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
+F+E+ NL +WN I+ + EA+ F E + P+ +T + L AC+ L
Sbjct: 164 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWL 223
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAIL-------QHQAGELFRLFSLM----------- 366
L GMQ+H +++ GF ++V VCN ++ Q ++ E+ +F+ M
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI--IFTEMGTKNAVSWCSL 281
Query: 367 ---------------LASQTKPDHITFND-----VMGACAAMASLEMGTQLHCYIMKTGL 406
L +++ D + +D V+ ACA MA LE+G +H + +K +
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
+FV + L+DMY KCG + + + F+ M + ++V+ +SLI GYA G + AL LF
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 467 M--RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLAR 524
M R G PN++T V +L+ACS G VE G++++ M++ YGI P E SC+VD+L R
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 525 AGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLL 584
AG V A +FI +M I VW +L +C+ HG +G AAEN+ K+DP +S VLL
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 521
Query: 585 CNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
N +A++G+W E + +K G++K G SWI ++ ++HA
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHA 563
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 15/297 (5%)
Query: 16 CEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLC--KQNLYNEALVAFDFLQNN 73
C +D + L D A ++ D R + W+ + +S+ + EA + F + +
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206
Query: 74 TNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLED 133
N T+ ++ACS L LG ++H +L S D + N +++ YGKC +
Sbjct: 207 PN----SITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 134 ARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSG 193
+ ++F EM +N VSW +++A QN ++ A LY++ + + F S++ AC+G
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 194 LCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSM 253
+ + LGR +HAH +K+ + +AL+ MY K I D+ F + K++ + S+
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 254 IDGFS---KLDFARTVFNEM------ESPNLASWNTIIAGVASCSNANEAMSLFSEM 301
I G++ ++D A +F EM +PN ++ ++++ + M +F M
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 304/586 (51%), Gaps = 78/586 (13%)
Query: 119 NHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLM 178
N +L+ Y K G ++ FD++PQR+ VSWT MI G GQ + AI + M++ G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK---------- 228
P QFT +++ + + C+ G+++H+ ++K ++ N+L+ MY K
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 229 FDRI----LDAWNV-----------------FSSIARKDITSWGSMIDGFSK-------L 260
FDR+ + +WN F +A +DI +W SMI GF++ L
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 261 D-FARTVFNEMESPN---LAS--------------------------------WNTIIAG 284
D F++ + + + SP+ LAS N +I+
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 285 VASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSN 344
+ C A L + G ++L +G T +LL + Q I + + +
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFT--ALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 345 VPVCNAILQHQA-GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
+ QH + GE LF M+ +P+ T ++ +++ASL G Q+H +K
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 404 TGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQFGCGEEALK 462
+G V V N L+ MY K G++ SA F+ + + D VSW+S+I+ AQ G EEAL+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LF M G+RP+H+T VGV +AC+H GLV +G Q + +M++ IIPT +C+VDL
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + EA++FI +M + D+V W SLL++C+ H N+D+GK AAE +L ++P NS A
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHASG 628
L N+Y++ GKWEE A++ SMK+ V+K G SWIE++ K+H G
Sbjct: 622 ALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFG 667
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 246/535 (45%), Gaps = 76/535 (14%)
Query: 80 PSTYADLISACSSLRSLQLGRK--------VHDHILSSKCQPDAVLHNHILNMYGKCGSL 131
P + + L+ C++L + + VH ++ S L N+++N+Y K G
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 132 EDARMVFDEM-------------------------------PQRNVVSWTAMIAGCSQNG 160
AR +FDEM PQR+ VSWT MI G G
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 161 QENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQN 220
Q + AI + M++ G+ P QFT +++ + + C+ G+++H+ ++K ++ N
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 221 ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMID---GFSKLDFARTVFNEMESPNLAS 277
+L+ MY K + A VF + +DI+SW +MI ++D A F +M ++ +
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 278 WNTIIAGVASCSNANEAMSLFSEM-GDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYI 336
WN++I+G A+ +FS+M D L PD T+ S+L AC + L G QIHS+I
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI 305
Query: 337 IKKGFYSNVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+ GF + V NA L ++S +T I + GT+
Sbjct: 306 VTTGFDISGIVLNA--------LISMYSRCGGVETARRLIE--------------QRGTK 343
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
L ++ F L+D Y+K G + A+ +F ++D DVV+W+++IVGY Q G
Sbjct: 344 --------DLKIEGF--TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
EA+ LFR M G RPN TL +L+ S + + G Q++ G I + +
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSN 452
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
++ + A+AG + A + + + D V W S++ + HG+ + E +L
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 207/449 (46%), Gaps = 78/449 (17%)
Query: 78 IRPS--TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I P+ T +++++ ++ R ++ G+KVH I+ + + + N +LNMY KCG A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 136 MVFD-------------------------------EMPQRNVVSWTAMIAGCSQNGQENA 164
VFD +M +R++V+W +MI+G +Q G +
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 165 AIELYVQMLQSGLM-PDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
A++++ +ML+ L+ PD+FT S++ AC+ L + +G+Q+H+H++ + I NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 224 AMYTKFDRILDAWNVFSSIARKD--ITSWGSMIDGFSKL---DFARTVFNEMESPNLASW 278
+MY++ + A + KD I + +++DG+ KL + A+ +F ++ ++ +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 279 NTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIK 338
+I G + EA++LF M P+ T+ ++L +S SL G QIH +K
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 339 KGFYSNVPVCNAIL------------------------------------QH-QAGELFR 361
G +V V NA++ QH A E
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 362 LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM-DMY 420
LF ML +PDHIT+ V AC + G Q + + M D++
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 421 VKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G L A+E M +PDVV+W SL+
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 183/451 (40%), Gaps = 94/451 (20%)
Query: 34 VVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSL 93
++ F +R D+ D+FS + + D L + F T A ++SAC++L
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLR-----------DSLLSPDRF-----TLASVLSACANL 292
Query: 94 RSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM----------------- 136
L +G+++H HI+++ ++ N +++MY +CG +E AR
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 137 ----------------VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+F + R+VV+WTAMI G Q+G AI L+ M+ G P+
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+T +++ S L + G+Q+H +KS + NALI MY K I A F
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 241 SIA-RKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
I +D SW SM I +A +A EA+ LF
Sbjct: 473 LIRCERDTVSWTSM----------------------------IIALAQHGHAEEALELFE 504
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQH 354
M L PD +T + ACT + QG Q + + K +P C L
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 355 QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL----DV 410
+AG L + +PD +T+ ++ AC ++++G + L L +
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK-----VAAERLLLLEPENS 617
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDV 441
+ L ++Y CG A ++ M+D V
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 192/449 (42%), Gaps = 59/449 (13%)
Query: 179 PDQFTFGSIIRACSGLCCVGLGRQ--------LHAHVIKSEHGSHLISQNALIAMYTKFD 230
P + +++ C+ L + + +H VIKS + N L+ +Y+K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 231 RILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVAS 287
L A +F + + SW +++ +SK +D F+++ + SW T+I G +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 288 CSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV 347
++A+ + +M + P T+ ++L + + + G ++HS+I+K G NV V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 348 CNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLA 407
N++L M A P MA ++ +
Sbjct: 184 SNSLLN------------MYAKCGDP-------------MMAK---------FVFDRMVV 209
Query: 408 LDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM 467
D+ N ++ ++++ G + A F M + D+V+W+S+I G+ Q G AL +F +M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 468 -RSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY-RIMQNEY---GIIPTRERRSCVVDLL 522
R S + P+ TL VL+AC+++ + G Q++ I+ + GI+ + ++ +
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV-----LNALISMY 324
Query: 523 ARAGRVHEAEDFINQMAFDD-DIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
+R G V A I Q D I + +LL G+++ K ++ D A+
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVR 610
++ Y G + E L SM G R
Sbjct: 385 IVG---YEQHGSYGEAINLFRSMVGGGQR 410
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 297/584 (50%), Gaps = 70/584 (11%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S YA LI + + L +++H +L Q L +++ G + AR VFD+
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P+ + W A+I G S+N A+ +Y M + + PD FTF +++ACSGL + +G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
R +HA V + + + QN LIA+Y K R+ GS
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRL------------------GS-------- 172
Query: 261 DFARTVFNEMESP--NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
ARTVF + P + SW I++ A EA+ +FS+M ++ PD + + S+L
Sbjct: 173 --ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230
Query: 319 ACTSPLSLYQGMQIHSYIIKKGF-------------------------------YSNVPV 347
A T L QG IH+ ++K G N+ +
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLIL 290
Query: 348 CNAILQHQAG-----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
NA++ A E +F M+ +PD I+ + ACA + SLE ++ Y+
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
++ DVF+ + L+DM+ KCGS+ AR +F+ D DVV WS++IVGY G EA+
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
L+R M GV PN VT +G+L AC+H G+V EG + M ++ I P ++ +CV+DLL
Sbjct: 411 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLL 469
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALV 582
RAG + +A + I M + VW +LL++CK H +V++G+ AA+ + IDP+N+ V
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Query: 583 LLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
L N+YA++ W+ VA + MKE+G+ K G SW+E++ ++ A
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 66 AFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILN 123
A D N +RP T + ISAC+ + SL+ R +++++ S + D + + +++
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 124 MYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFT 183
M+ KCGS+E AR+VFD R+VV W+AMI G +G+ AI LY M + G+ P+ T
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 184 FGSIIRACS 192
F ++ AC+
Sbjct: 427 FLGLLMACN 435
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 312 bits (799), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 202/689 (29%), Positives = 333/689 (48%), Gaps = 92/689 (13%)
Query: 19 WDAFEL--CML--LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
W+AF C + L +A EV D R W+ ++ S L ++ +ALV + + +
Sbjct: 75 WNAFLTFRCKVGDLGEACEVFDGMPERDVVSWN-NMISVLVRKGFEEKALVVYKRMVCD- 132
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
F T A ++SACS + G + H + + + + N +L+MY KCG + D
Sbjct: 133 GFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDY 192
Query: 135 RM-VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSII----- 188
+ VF+ + Q N VS+TA+I G ++ + A++++ M + G+ D +I+
Sbjct: 193 GVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAP 252
Query: 189 -RACSGLCCV---GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
C L + LG+Q+H ++ G L N+L+ +Y K + A +F+ +
Sbjct: 253 REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE 312
Query: 245 KDITSWGSMIDGFSK--------------------------------------LDFARTV 266
++ SW MI GF + ++ R +
Sbjct: 313 VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI 372
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
F+ + P++++WN +++G ++ + EA+S F +M + L PD T+ +L +C L
Sbjct: 373 FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL 432
Query: 327 YQGMQIHSYIIKKGFYSNVPVCNAIL---------------------------------- 352
G QIH +I+ N + + ++
Sbjct: 433 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISG 492
Query: 353 -QHQAGELFRLFSLMLASQTK---PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL 408
+H + L QT P+ +F V+ +C+ + SL G Q H ++K+G
Sbjct: 493 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 552
Query: 409 DVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMR 468
D FV L DMY KCG + SAR+ F+ + + V W+ +I GY G G+EA+ L+R+M
Sbjct: 553 DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
SSG +P+ +T V VLTACSH GLVE GL++ MQ +GI P + C+VD L RAGR+
Sbjct: 613 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 672
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
+AE + V+W+ LL+SC+ HG+V + +R AE ++++DP +SAA VLL N Y
Sbjct: 673 EDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 732
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSW 617
+S +W++ A L G M + V K PGQSW
Sbjct: 733 SSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 223/502 (44%), Gaps = 83/502 (16%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM----------------- 141
G+ +H I+ + D L N +L++Y +CG + AR VFDEM
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 142 --------------PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSI 187
P+R+VVSW MI+ + G E A+ +Y +M+ G +P +FT S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 188 IRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDI 247
+ ACS + G + H +K+ ++ NAL++MY K I
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI--------------- 189
Query: 248 TSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI 307
+D+ VF + PN S+ +I G+A + EA+ +F M ++ +
Sbjct: 190 ------------VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQ 237
Query: 308 PDGLTVRSLLC------ACTSPLSLYQ---GMQIHSYIIKKGFYSNVPVCNAILQ-HQAG 357
D + + ++L C S +Y G QIH ++ GF ++ + N++L+ +
Sbjct: 238 VDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKN 297
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
+ L+ A + + +++N ++ + + + +G + ++
Sbjct: 298 KDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVL 357
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
+ G + + R +F+ + P V +W++++ GY+ + EEA+ FR+M+ ++P+
Sbjct: 358 GACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC--VVDLLARAGRVHEAEDFI 535
TL +L++C+ + +E G Q++ + +I T ++ V L+A + E I
Sbjct: 418 TLSVILSSCARLRFLEGGKQIHGV------VIRTEISKNSHIVSGLIAVYSECEKME--I 469
Query: 536 NQMAFDD-----DIVVWKSLLA 552
++ FDD DI W S+++
Sbjct: 470 SECIFDDCINELDIACWNSMIS 491
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 203/465 (43%), Gaps = 58/465 (12%)
Query: 184 FGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA 243
S++R C G+ +H +++ S N L+ +Y + A VF ++
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 244 RKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
+D+ SW + + K L A VF+ M ++ SWN +I+ + +A+ ++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------- 352
M +P T+ S+L AC+ L GM+ H +K G N+ V NA+L
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 353 -----------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+++ E ++F LM + D + ++++
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 384 ------ACAAMASL---EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
C +++ + E+G Q+HC ++ G D+ + N L+++Y K + A +F
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
M + +VVSW+ +IVG+ Q +++++ RMR SG +PN VT + VL AC G VE
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDD---DIVVWKSLL 551
G +++ + P+ + ++ + EA QM F + D +L
Sbjct: 369 GRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 423
Query: 552 ASCKTHGNVDVGKRAAENILKIDPTNSAALVL-LCNIYASSGKWE 595
+SC ++ GK+ +++ + + ++ +V L +Y+ K E
Sbjct: 424 SSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 311 bits (797), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 303/603 (50%), Gaps = 68/603 (11%)
Query: 70 LQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG 129
L N + ++ +++ + ACS + GR++H ++ D + +L+MY KCG
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 130 SLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIR 189
+ +A VF + + + W AM+A ++N +A++L+ M Q ++PD FT ++I
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 190 ACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITS 249
CS L G+ +HA + K S ++AL+ +Y+K DA+ VF S+ KD
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKD--- 438
Query: 250 WGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE--LI 307
+ +W ++I+G+ EA+ +F +M D + L
Sbjct: 439 -------------------------MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 308 PDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI--------LQHQAGEL 359
PD + S+ AC +L G+Q+H +IK G NV V +++ L A ++
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 360 FR----------------------------LFSLMLASQTKPDHITFNDVMGACAAMASL 391
F LF+LML+ PD ++ V+ A ++ ASL
Sbjct: 534 FTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G LH Y ++ G+ D + N L+DMYVKCG A +F M+ +++W+ +I GY
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGY 653
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
G AL LF M+ +G P+ VT + +++AC+H G VEEG ++ M+ +YGI P
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
E + +VDLL RAG + EA FI M + D +W LL++ +TH NV++G +AE +L
Sbjct: 714 MEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL 773
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI--QTKIHASGN 629
+++P + V L N+Y +G E A+L+G MKE+G+ K PG SWIE+ +T + SG
Sbjct: 774 RMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGG 833
Query: 630 DIS 632
S
Sbjct: 834 SSS 836
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/542 (26%), Positives = 249/542 (45%), Gaps = 51/542 (9%)
Query: 53 SLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQ 112
+L ++ Y +AL + ++ F T+ L+ ACS+L +L G+ +H ++ +
Sbjct: 33 ALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWR 92
Query: 113 PDAVLHNHILNMYGKCGSLEDARMVFDEMPQ-------RNVVSWTAMIAGCSQNGQENAA 165
D + ++NMY KCG L+ A VFD Q R+V W +MI G + +
Sbjct: 93 YDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEG 152
Query: 166 IELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG-----LGRQLHAHVIKSEHGSHLISQN 220
+ + +ML G+ PD F+ ++ S +C G G+Q+H ++++ + +
Sbjct: 153 VGCFRRMLVFGVRPDAFSLSIVV---SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKT 209
Query: 221 ALIAMYTKFDRILDAWNVFSSIARK-DITSWGSMIDGF-------SKLDFARTVFNEMES 272
ALI MY KF +DAW VF I K ++ W MI GF S LD N S
Sbjct: 210 ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN--NS 267
Query: 273 PNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQ--GM 330
L S + + +CS + S F +++ GL + CTS LS+Y GM
Sbjct: 268 VKLVS-TSFTGALGACSQSEN--SGFGRQIHCDVVKMGLHNDPYV--CTSLLSMYSKCGM 322
Query: 331 -----QIHSYIIKKGFYSNVPVCNAILQHQAGELF-----RLFSLMLASQTKPDHITFND 380
+ S ++ K + + NA++ A + LF M PD T ++
Sbjct: 323 VGEAETVFSCVVDK----RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 381 VMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPD 440
V+ C+ + G +H + K + + + L+ +Y KCG A +F ME+ D
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKD 438
Query: 441 VVSWSSLIVGYAQFGCGEEALKLFRRMR--SSGVRPNHVTLVGVLTACSHVGLVEEGLQL 498
+V+W SLI G + G +EALK+F M+ ++P+ + V AC+ + + GLQ+
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498
Query: 499 YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ M + G++ S ++DL ++ G A M+ +++V W S++ SC +
Sbjct: 499 HGSMI-KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMI-SCYSRN 555
Query: 559 NV 560
N+
Sbjct: 556 NL 557
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 156/349 (44%), Gaps = 32/349 (9%)
Query: 50 LFSSLCKQNLYNEALVAF-DFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
L S LCK + EAL F D ++ + + + +AC+ L +L+ G +VH ++
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
+ + + + ++++Y KCG E A VF M N+V+W +MI+ S+N +I+L
Sbjct: 505 TGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDL 564
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ ML G+ PD + S++ A S + G+ LH + ++ S +NALI MY K
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVK 624
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
A N+F + K + +W N +I G S
Sbjct: 625 CGFSKYAENIFKKMQHKSLITW----------------------------NLMIYGYGSH 656
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVP- 346
+ A+SLF EM PD +T SL+ AC + +G I ++ + G N+
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 347 VCNAI-LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
N + L +AG L +S + A + D + ++ A ++E+G
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELG 765
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 299/594 (50%), Gaps = 58/594 (9%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM--YGKCGSLEDARMVF 138
S + LI C SLR L ++ H H++ + D + + M SLE AR VF
Sbjct: 31 SRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVF 87
Query: 139 DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQML-QSGLMPDQFTFGSIIRACSGLCCV 197
DE+P+ N +W +I + +I ++ M+ +S P+++TF +I+A + + +
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
LG+ LH +KS GS + N+LI Y + A VF++I KD+ SW SMI+GF
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 258 SKL---DFARTVFNEMESPNLASWNTIIAGVAS--------------CSN---------- 290
+ D A +F +MES ++ + + + GV S CS
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 291 --ANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
AN + ++++ G E + L A ++ + Y I + + + V
Sbjct: 268 TLANAMLDMYTKCGSIE------DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVL 321
Query: 349 NAILQ-------------HQAGE----LFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
N++ Q Q G+ L L L K + IT + ACA + +L
Sbjct: 322 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 381
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
E+G +H YI K G+ ++ V + L+ MY KCG L +RE+FN +E DV WS++I G
Sbjct: 382 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 441
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
A GCG EA+ +F +M+ + V+PN VT V ACSH GLV+E L+ M++ YGI+P
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
+ +C+VD+L R+G + +A FI M VW +LL +CK H N+++ + A +L
Sbjct: 502 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLL 561
Query: 572 KIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
+++P N A VLL NIYA GKWE V+ L M+ G++K PG S IEI IH
Sbjct: 562 ELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + + + A EV++S ++ W+ L S+ + NEAL+ F LQ N ++
Sbjct: 306 DGYAISEDYEAAREVLNSMPQKDIVAWN-ALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T +SAC+ + +L+LGR +H +I + + + + +++MY KCG LE +R VF+
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+ +R+V W+AMI G + +G N A++++ +M ++ + P+ TF ++ ACS V
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 200 GRQLHAHVIKSEHG 213
L H ++S +G
Sbjct: 485 AESLF-HQMESNYG 497
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 309 bits (792), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 206/726 (28%), Positives = 341/726 (46%), Gaps = 117/726 (16%)
Query: 15 CCEYWDAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNT 74
C + +C D + V D+ + W+ + SS + LY+E L F + + T
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWN-AVISSYSRNELYDEVLETFIEMISTT 181
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
+ TY +I AC+ + + +G VH ++ + D + N +++ YG G + DA
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS----GLMPDQFTFGSIIRA 190
+FD MP+RN+VSW +MI S NG + L +M++ MPD T +++
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
C+ +GLG+ +H +K L+ NAL+ MY+K I +A +F K++ SW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 251 GSMIDGFSK----------------------------LDFARTVFNEMESPNLASW---- 278
+M+ GFS L+ F+E P+L
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 279 ------------NTIIAGVASCSNANEAMSLFS--------------------------- 299
N +A A C + + A +F
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSL 481
Query: 300 ----EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQH- 354
+M L+PD TV SLL AC+ SL G ++H +II+ ++ V ++L
Sbjct: 482 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 541
Query: 355 -QAGELFRLFSLMLASQTK-----------------PDH-----------------ITFN 379
GEL + +L A + K PD I+
Sbjct: 542 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 601
Query: 380 DVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDP 439
V GAC+ + SL +G + H Y +K L D F+ L+DMY K GS+ + ++FN +++
Sbjct: 602 PVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 661
Query: 440 DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLY 499
SW+++I+GY G +EA+KLF M+ +G P+ +T +GVLTAC+H GL+ EGL+
Sbjct: 662 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721
Query: 500 RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFI-NQMAFDDDIVVWKSLLASCKTHG 558
M++ +G+ P + +CV+D+L RAG++ +A + +M+ + D+ +WKSLL+SC+ H
Sbjct: 722 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 781
Query: 559 NVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWI 618
N+++G++ A + +++P VLL N+YA GKWE+V ++ M E +RK G SWI
Sbjct: 782 NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Query: 619 EIQTKI 624
E+ K+
Sbjct: 842 ELNRKV 847
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 229/520 (44%), Gaps = 74/520 (14%)
Query: 86 LISACSSLRSLQLGRKVHDHIL-SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQR 144
L+ A + +++GRK+H + S++ + D VL I+ MY CGS +D+R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQS-GLMPDQFTFGSIIRACSGLCCVGLGRQL 203
N+ W A+I+ S+N + +E +++M+ + L+PD FT+ +I+AC+G+ VG+G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFA 263
H V+K+ + NAL++ Y + DA +F + +++ SW SMI FS F+
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 264 RTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSP 323
F ++ G + E GD +PD T+ ++L C
Sbjct: 270 EESF-------------LLLG-----------EMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 324 LSLYQGMQIHSYIIKKGFYSNVPVCNAIL------------------------------- 352
+ G +H + +K + + NA++
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 353 -----QHQAGELFRLFSLMLA--SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTG 405
+ F + MLA K D +T + + C + L +LHCY +K
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 406 LALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFR 465
+ V N + Y KCGSL A+ +F+ + V SW++LI G+AQ +L
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 466 RMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
+M+ SG+ P+ T+ +L+ACS + + G +++ II R V L +
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF------IIRNWLERDLFVYLSVLS 539
Query: 526 GRVHEAEDFINQMAF----DDDIVVWKSLLASCKTHGNVD 561
+H E Q F D +V W +++ +G D
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 579
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 309 bits (791), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 312/618 (50%), Gaps = 73/618 (11%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS--ACSSLRSLQLGRKVHDHIL 107
L SL ++ + E L F + + +P + ++ AC LR + G +H +
Sbjct: 31 LLKSLSREKQWEEVLYHFSHMFRDEE---KPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 108 SS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAI 166
D + + ++ MY KCG + +A +FDE+ + ++V+W++M++G +NG A+
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAV 147
Query: 167 ELYVQM-LQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAM 225
E + +M + S + PD+ T +++ AC+ L LGR +H VI+ + L N+L+
Sbjct: 148 EFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNC 207
Query: 226 YTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGV 285
Y K +A N+F IA KD+ SW +T+IA
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISW----------------------------STVIACY 239
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
A EA+ +F++M D P+ TV +L AC + L QG + H I+KG + V
Sbjct: 240 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 299
Query: 346 PVCNAILQ-----HQAGELFRLFS--------------------------------LMLA 368
V A++ E + +FS ++L
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 369 SQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGS 428
+ T+PD I V+G+C+ + LE H Y++K G + F+ L+++Y +CGSLG+
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 429 ARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-RSSGVRPNHVTLVGVLTACS 487
A ++FN + D V W+SLI GY G G +AL+ F M +SS V+PN VT + +L+ACS
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
H GL+ EGL+++++M N+Y + P E + +VDLL R G + A + +M F +
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 539
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKER 607
+LL +C+ H N ++ + A+ + +++ ++ +L+ N+Y G+WE V +L S+K+R
Sbjct: 540 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQR 599
Query: 608 GVRKVPGQSWIEIQTKIH 625
G++K +S IEI+ K+H
Sbjct: 600 GIKKGLAESLIEIRRKVH 617
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 309 bits (791), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/598 (30%), Positives = 308/598 (51%), Gaps = 77/598 (12%)
Query: 80 PSTYADLIS---ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
P+ +L+S C+ G +VH ++L S + + N++++MY KC A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VFD MP+RNVVSW+A+++G NG ++ L+ +M + G+ P++FTF + ++AC L
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ G Q+H +K + N+L+ MY+K RI +A VF I +
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR----------- 171
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELI--PDGLTVR 314
+L SWN +IAG ++A+ F M + + PD T+
Sbjct: 172 -----------------SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFY--SNVPVCNAILQ------------------- 353
SLL AC+S +Y G QIH ++++ GF+ S+ + +++
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 354 --------------HQAGELFR---LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
Q GE LF + ++ D + ++G A A L G Q
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+ +K L+ V+N ++DMY+KCG + A + F M+ DV+SW+ +I GY + G
Sbjct: 335 MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 394
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G++++++F M + P+ V + VL+ACSH G+++EG +L+ + +GI P E +
Sbjct: 395 GKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYA 454
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
CVVDLL RAGR+ EA+ I+ M ++ +W++LL+ C+ HG++++GK + +L+ID
Sbjct: 455 CVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK 514
Query: 577 NSAALVLLCNIYASSGKWEEV--ARLMGSMKERGVRKVPGQSWIEIQTKIH--ASGND 630
N A V++ N+Y +G W E AR +G++K G++K G SW+EI+ ++H SG D
Sbjct: 515 NPANYVMMSNLYGQAGYWNEQGNARELGNIK--GLKKEAGMSWVEIEREVHFFRSGED 570
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C L A + D + W L ++ + EA+ F LQ N +I
Sbjct: 255 DLYVKCGYLFSARKAFDQIKEKTMISWS-SLILGYAQEGEFVEAMGLFKRLQE-LNSQID 312
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
+ +I + L+ G+++ + + + N +++MY KCG +++A F
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
EM ++V+SWT +I G ++G ++ ++ +ML+ + PD+ + +++ ACS +
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 200 GRQLHAHVIKSEHG 213
G +L + ++++ HG
Sbjct: 433 GEELFSKLLET-HG 445
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 309 bits (791), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 275/531 (51%), Gaps = 33/531 (6%)
Query: 100 RKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQN 159
R VH I+ + ++ L ++ Y + AR VFDE+P+RNV+ MI N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 160 GQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQ 219
G ++++ M + PD +TF +++ACS + +GR++H K S L
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 220 NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWN 279
N L++MY K GF L AR V +EM ++ SWN
Sbjct: 179 NGLVSMYGKC--------------------------GF--LSEARLVLDEMSRRDVVSWN 210
Query: 280 TIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKK 339
+++ G A ++A+ + EM ++ D T+ SLL A S + M + K
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-VSNTTTENVMYVKDMFFKM 269
Query: 340 GFYS----NVPVCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
G S NV + + E L+S M A +PD ++ V+ AC ++L +G
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
++H YI + L ++ + N L+DMY KCG L AR++F M+ DVVSW+++I Y G
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERR 515
G +A+ LF +++ SG+ P+ + V L ACSH GL+EEG +++M + Y I P E
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 449
Query: 516 SCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDP 575
+C+VDLL RAG+V EA FI M+ + + VW +LL +C+ H + D+G AA+ + ++ P
Sbjct: 450 ACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAP 509
Query: 576 TNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
S VLL NIYA +G+WEEV + MK +G++K PG S +E+ IH
Sbjct: 510 EQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 560
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 180/414 (43%), Gaps = 60/414 (14%)
Query: 35 VDSFLRRFDDIWDFD------LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLIS 88
V S + FD+I + + + S Y E + F + N R T+ ++
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLK 148
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVS 148
ACS ++ +GRK+H + N +++MYGKCG L +AR+V DEM +R+VVS
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 149 WTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVI 208
W +++ G +QN + + A+E+ +M + D T S++ A S + ++ +
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV---MYVKDM 265
Query: 209 KSEHGSH-LISQNALIAMYTKFDRILDAWNVFSS-------------------------- 241
+ G L+S N +I +Y K ++A ++S
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 242 ---------IARKDITS----WGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGV 285
I RK + ++ID ++K L+ AR VF M+S ++ SW +I+
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 286 ASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNV 345
+A++LFS++ D L+PD + + L AC+ L +G + + Y
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS--CFKLMTDHYKIT 443
Query: 346 P-----VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
P C L +AG++ + + +P+ + ++GAC + ++G
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 57/373 (15%)
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTI----IAGVASCSNANEAMSLFSEMGDREL 306
G ++D + + RTV + + +L +++ + AS + A +F E+ +R +
Sbjct: 46 GQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNV 105
Query: 307 IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAGELFRLFSLM 366
I + +RS + GFY GE ++F M
Sbjct: 106 IIINVMIRSY--------------------VNNGFY--------------GEGVKVFGTM 131
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+PDH TF V+ AC+ ++ +G ++H K GL+ +FV NGL+ MY KCG L
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
AR + + M DVVSW+SL+VGYAQ ++AL++ R M S + + T+ +L A
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV-----VDLLARAGRVHEAEDFINQM--- 538
S+ E + + M + G ++S V + + + EA + ++M
Sbjct: 252 SNT--TTENVMYVKDMFFKMG------KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD 303
Query: 539 AFDDDIVVWKSLLASCKTHGNVDVGKRAAENI--LKIDPTNSAALVLLCNIYASSGKWEE 596
F+ D V S+L +C + +GK+ I K+ P N L ++YA G E+
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEK 362
Query: 597 VARLMGSMKERGV 609
+ +MK R V
Sbjct: 363 ARDVFENMKSRDV 375
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 308 bits (790), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 320/649 (49%), Gaps = 80/649 (12%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFD-LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTY 83
C L A ++ D R +I F+ L S + Y +A+ F N ++ TY
Sbjct: 95 CRELGFARQLFDRMPER--NIISFNSLISGYTQMGFYEQAMELF-LEAREANLKLDKFTY 151
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A + C L LG +H ++ + L N +++MY KCG L+ A +FD +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL---- 199
R+ VSW ++I+G + G + L +M + GL + GS+++AC C+ L
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC----CINLNEGF 267
Query: 200 ---GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
G +H + K ++ + AL+ MY K + +A +FS + K++ ++ +MI G
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F ++D E + AS +EA LF +M R L P T +
Sbjct: 328 FLQMD---------EITDEAS--------------SEAFKLFMDMQRRGLEPSPSTFSVV 364
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L AC++ +L G QIH+ I K F S+ + +A+++
Sbjct: 365 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI 424
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
Q F LF + +S +P+ T + +M ACA A+L G Q+ Y
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGY 484
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+K+G+ V + MY K G++ A ++F +++PDV ++S++I AQ G EA
Sbjct: 485 AIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L +F M++ G++PN +GVL AC H GLV +GL+ ++ M+N+Y I P + +C+VD
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R GR+ +AE+ I F D V W++LL+SC+ + + +GKR AE +++++P S +
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 664
Query: 581 LVLLCNIYASSG---KWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
VLL NIY SG EEV L M++RGV+K P SWI I + H+
Sbjct: 665 YVLLHNIYNDSGVNSSAEEVREL---MRDRGVKKEPALSWIVIGNQTHS 710
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 249/530 (46%), Gaps = 24/530 (4%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
N + Y L + S+ LG+ H H++ S P L N++LNMY KC L A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
R +FD MP+RN++S+ ++I+G +Q G A+EL+++ ++ L D+FT+ + C
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
C + LG LH V+ + + N LI MY+K ++ A ++F +D SW S+I
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 255 DGFSKLDFARTVFNEM-----ESPNLASWNTIIAGVASCSNANE-----AMSLFSEMGDR 304
G+ ++ A N + + NL ++ A C N NE M++
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ------HQAGE 358
+ D + +LL SL + +++ S + K + + + LQ + E
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 359 LFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMD 418
F+LF M +P TF+ V+ AC+A +LE G Q+H I K D F+ + L++
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 419 MYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVT 478
+Y GS + F D+ SW+S+I + Q E A LFR++ SS +RP T
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 479 LVGVLTACSHVGLVEEGLQL--YRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+ +++AC+ + G Q+ Y I + GI ++ + + A++G + A
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAI---KSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLL 584
++ + D+ + ++++S HG+ + E++ I P A L +L
Sbjct: 519 EVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 124/243 (51%), Gaps = 22/243 (9%)
Query: 339 KGFYSNVPVCN--AILQHQAGELFR-LFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
K F++N+ + ++ + G +R L SL T D + + A S+ +G
Sbjct: 8 KTFFNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGK 67
Query: 396 QLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFG 455
H +++K+ L ++++N L++MY KC LG AR+LF+ M + +++S++SLI GY Q G
Sbjct: 68 LAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMG 127
Query: 456 CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSH-----VGLVEEGLQLYRIMQNEYGIIP 510
E+A++LF R + ++ + T G L C +G + GL + + + +I
Sbjct: 128 FYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLI- 186
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+ ++D+ ++ G++ +A ++ + D V W SL++ G V VG AAE
Sbjct: 187 -----NVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS-----GYVRVG--AAEEP 233
Query: 571 LKI 573
L +
Sbjct: 234 LNL 236
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 308 bits (790), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 193/636 (30%), Positives = 320/636 (50%), Gaps = 80/636 (12%)
Query: 33 EVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISAC 90
+V D R W L S + ++ +E L F +QN +P+ T+A +
Sbjct: 149 KVFDEMKERNVVTWT-TLISGYARNSMNDEVLTLFMRMQNEGT---QPNSFTFAAALGVL 204
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
+ G +VH ++ + + N ++N+Y KCG++ AR++FD+ ++VV+W
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWN 264
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
+MI+G + NG + A+ ++ M + + + +F S+I+ C+ L + QLH V+K
Sbjct: 265 SMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKY 324
Query: 211 EHGSHLISQN---ALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
L QN AL+ Y+K +LDA +F K+I G
Sbjct: 325 ---GFLFDQNIRTALMVAYSKCTAMLDALRLF-----KEIGCVG---------------- 360
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
N+ SW +I+G EA+ LFSEM + + P+ T +L A L +
Sbjct: 361 ------NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVI 410
Query: 328 QGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELF------------------- 360
++H+ ++K + + V A+L +A ++F
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 361 ---------RLFSLMLASQTKPDHITFNDVMGACAAM-ASLEMGTQLHCYIMKTGLALDV 410
++F + KP+ TF+ ++ CAA AS+ G Q H + +K+ L +
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V + L+ MY K G++ SA E+F + D+VSW+S+I GYAQ G +AL +F+ M+
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
V+ + VT +GV AC+H GLVEEG + + IM + I PT+E SC+VDL +RAG++ +
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
A I M +W+++LA+C+ H ++G+ AAE I+ + P +SAA VLL N+YA
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
SG W+E A++ M ER V+K PG SWIE++ K ++
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 247/529 (46%), Gaps = 38/529 (7%)
Query: 81 STYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
S ++ ++ ++L GR++H + D + +++ Y K + +D R VFDE
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
M +RNVV+WT +I+G ++N + + L+++M G P+ FTF + + + G G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK- 259
Q+H V+K+ + N+LI +Y K + A +F K + +W SMI G++
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 260 -LDF-ARTVFNEMESPNLASWNTIIAGVAS-CSNANEAMSLFSEMGDRELIPDGL----T 312
LD A +F M + + A V C+N E F+E ++ G
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR--FTEQLHCSVVKYGFLFDQN 331
Query: 313 VRS-LLCACTSPLSLYQGMQIHSYIIKKGFYSNV----PVCNAILQHQAG-ELFRLFSLM 366
+R+ L+ A + ++ +++ I G NV + + LQ+ E LFS M
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+P+ T++ ++ A ++ +++H ++KT V L+D YVK G +
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
A ++F+ ++D D+V+WS+++ GYAQ G E A+K+F + G++PN T +L C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 487 SHVGL-VEEGLQLYRIMQNEYGIIPTRERRSCV----VDLLARAGRVHEAEDFINQMAFD 541
+ + +G Q + + I + CV + + A+ G + AE+ + +
Sbjct: 505 AATNASMGQGKQFH-----GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-E 558
Query: 542 DDIVVWKSLLASCKTHGN----VDVGKRAAENILKIDPTNSAALVLLCN 586
D+V W S+++ HG +DV K + +K+D + C
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT 607
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 196/468 (41%), Gaps = 71/468 (15%)
Query: 131 LEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRA 190
L +A +FD+ P R+ S+ +++ G S++G+ A L++ + + G+ D F S+++
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 191 CSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSW 250
+ LC GRQLH IK + +L+ Y K D VF + +++ +W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 251 GSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDG 310
++I G +AR N+ E ++LF M + P+
Sbjct: 163 TTLISG-----YARNSMND-----------------------EVLTLFMRMQNEGTQPNS 194
Query: 311 LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR- 361
T + L +G+Q+H+ ++K G +PV N+++ +A LF
Sbjct: 195 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 362 ---------------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMG 394
+F M + + +F V+ CA + L
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 395 TQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLIVGYAQ 453
QLHC ++K G D + LM Y KC ++ A LF + +VVSW+++I G+ Q
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQ 374
Query: 454 FGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRE 513
EEA+ LF M+ GVRPN T +LTA + E Q+ + + T
Sbjct: 375 NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT-- 432
Query: 514 RRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
++D + G+V EA + + D DIV W ++LA G +
Sbjct: 433 ---ALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE 476
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 308 bits (789), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 291/576 (50%), Gaps = 95/576 (16%)
Query: 84 ADLISACSSLRSLQLGRKVHDHI-LSSKCQPDAVLHNHILNMYGKCGSLEDA-------- 134
A L+ C +SL+ G+ +H H+ ++ +P+ +L NH++ MY KCG DA
Sbjct: 50 ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 135 -----------------------RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQ 171
R+VFD MP+R+VVSW M+ G +Q+G + A+ Y +
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 172 MLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDR 231
+SG+ ++F+F ++ AC + L RQ H V+ + S+++ ++I Y K
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC-- 227
Query: 232 ILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNA 291
+++ A+ F+EM ++ W T+I+G A +
Sbjct: 228 --------------------------GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 292 NEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAI 351
A LF EM ++ +P+S + +
Sbjct: 262 EAAEKLFCEMPEK-----------------NPVSW-----------------TALIAGYV 287
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
Q LF M+A KP+ TF+ + A A++ASL G ++H Y+++T + +
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
V++ L+DMY K GSL ++ +F +D D V W+++I AQ G G +AL++ M
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
V+PN TLV +L ACSH GLVEEGL+ + M ++GI+P +E +C++DLL RAG E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
I +M F+ D +W ++L C+ HGN ++GK+AA+ ++K+DP +SA +LL +IYA
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 591 SGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
GKWE V +L G MK+R V K SWIEI+ K+ A
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEA 563
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 178/404 (44%), Gaps = 63/404 (15%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
+L +A V DS R W+ + NL+ +F ++ F ++A L
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN--EFSFAGL 185
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD------- 139
++AC R LQL R+ H +L + + VL I++ Y KCG +E A+ FD
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 140 ------------------------EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
EMP++N VSWTA+IAG + G N A++L+ +M+
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
G+ P+QFTF S + A + + + G+++H ++I++ + I ++LI MY+K + +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
VF + D D VF WNT+I+ +A ++A+
Sbjct: 366 ERVF------------RICD-----DKHDCVF----------WNTMISALAQHGLGHKAL 398
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQ-IHSYIIKKGFYSNVP--VCNAIL 352
+ +M + P+ T+ +L AC+ + +G++ S ++ G + C L
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 353 QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
+AG L + +PD +N ++G C + E+G +
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKK 502
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 317/632 (50%), Gaps = 67/632 (10%)
Query: 31 AGEVVDSFLRRFD-DIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISA 89
A V ++F R D IW+ L S K +++++ L F L N + T+ ++I A
Sbjct: 58 ARHVFENFDIRSDVYIWN-SLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 90 CSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
+L LGR +H ++ S D V+ + ++ MY K E++ VFDEMP+R+V SW
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
+I+ Q+G+ A+EL+ +M SG P+ + I ACS L + G+++H +K
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
+AL+ MY K D L+ AR VF +
Sbjct: 237 KGFELDEYVNSALVDMYGKCD----------------------------CLEVAREVFQK 268
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
M +L +WN++I G + ++ + + + M P T+ S+L AC+ +L G
Sbjct: 269 MPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 330 MQIHSYIIKKGFYSNVPV-CNAI-LQHQAGEL---------------------------- 359
IH Y+I+ +++ V C+ I L + GE
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISV 388
Query: 360 ------FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
++ M++ KPD +TF V+ AC+ +A+LE G Q+H I ++ L D ++
Sbjct: 389 GNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL 448
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVR 473
+ L+DMY KCG+ A +FN + DVVSW+ +I Y G EAL F M+ G++
Sbjct: 449 SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 474 PNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAED 533
P+ VTL+ VL+AC H GL++EGL+ + M+++YGI P E SC++D+L RAGR+ EA +
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 534 FINQMA-FDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSG 592
I Q D+ + +L ++C H +G R A +++ P +++ ++L N+YAS
Sbjct: 569 IIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGE 628
Query: 593 KWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
W+ R+ MKE G+RK PG SWIE+ K+
Sbjct: 629 SWDAARRVRLKMKEMGLRKKPGCSWIEMSDKV 660
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 248/521 (47%), Gaps = 69/521 (13%)
Query: 78 IRPSTYADLISACS-SLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ S L+ C+ S +SL+ + VH IL+ + D VL ++N+Y C AR
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 137 VFDEMPQR-NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGL-MPDQFTFGSIIRACSGL 194
VF+ R +V W ++++G S+N + +E++ ++L + +PD FTF ++I+A L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMI 254
LGR +H V+KS + ++ ++L+ MY KF N+F +
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKF-------NLFEN------------- 160
Query: 255 DGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
+ VF+EM ++ASWNT+I+ A +A+ LF M P+ +++
Sbjct: 161 --------SLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLT 212
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR----- 361
+ AC+ L L +G +IH +KKGF + V +A++ A E+F+
Sbjct: 213 VAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK 272
Query: 362 -----------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLH 398
+ + M+ T+P T ++ AC+ +L G +H
Sbjct: 273 SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIH 332
Query: 399 CYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGE 458
Y++++ + D++V L+D+Y KCG A +F+ + SW+ +I Y G
Sbjct: 333 GYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWF 392
Query: 459 EALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCV 518
+A++++ +M S GV+P+ VT VL ACS + +E+G Q++ + +E + S +
Sbjct: 393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH-LSISESRLETDELLLSAL 451
Query: 519 VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
+D+ ++ G EA N + D+V W ++++ +HG
Sbjct: 452 LDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQ 491
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 193/443 (43%), Gaps = 79/443 (17%)
Query: 244 RKDITSWGSMID-GFSKLDF--ARTVFNEME-SPNLASWNTIIAGVASCSNANEAMSLFS 299
R+D+ S+I+ F+ D AR VF + ++ WN++++G + S ++ + +F
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 300 EMGDREL-IPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----- 353
+ + + +PD T +++ A + + G IH+ ++K G+ +V V ++++
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKF 155
Query: 354 ----------------------------HQAGEL---FRLFSLMLASQTKPDHITFNDVM 382
+Q+GE LF M +S +P+ ++ +
Sbjct: 156 NLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAI 215
Query: 383 GACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
AC+ + LE G ++H +K G LD +V + L+DMY KC L ARE+F M +V
Sbjct: 216 SACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLV 275
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+W+S+I GY G + +++ RM G RP+ TL +L ACS + G ++ +
Sbjct: 276 AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Query: 503 QNEYGIIPTRERRSC-VVDLLARAGRVHEAEDFINQMAFD-------------------- 541
++ +C ++DL + G + AE ++ D
Sbjct: 336 IR--SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFK 393
Query: 542 --------------DDIVVWKSLLASCKTHGNVDVGKRAAENILKID-PTNSAALVLLCN 586
D+V + S+L +C ++ GK+ +I + T+ L L +
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 587 IYASSGKWEEVARLMGSMKERGV 609
+Y+ G +E R+ S+ ++ V
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDV 476
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 297/573 (51%), Gaps = 68/573 (11%)
Query: 91 SSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWT 150
SSLR+ + + K + +L +++ Y + G +E+AR +FDEMP R+VV+WT
Sbjct: 21 SSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWT 80
Query: 151 AMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKS 210
AMI G + + A E + +M++ G P++FT S++++C + + G +H V+K
Sbjct: 81 AMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL 140
Query: 211 EHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEM 270
L NA++ MY ++A A +F ++
Sbjct: 141 GMEGSLYVDNAMMNMYATCSVTMEA---------------------------ACLIFRDI 173
Query: 271 ESPNLASWNTIIAGVASCSNANEAMSLFSEM--GDRELIPDGLTVRSLLCACTSPLSLYQ 328
+ N +W T+I G + + ++ +M + E+ P +T+ + A S S+
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTT 231
Query: 329 GMQIHSYIIKKGFYSNVPVCNAIL-----------------------------------Q 353
G QIH+ +IK+GF SN+PV N+IL +
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELER 291
Query: 354 HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
+ E +F + P+ TF ++ ACA +A+L G QLH I + G +V +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 414 NGLMDMYVKCGSLGSARELFNFMEDP-DVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGV 472
N L+DMY KCG++ ++ +F + D ++VSW+S+++GY G G EA++LF +M SSG+
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 473 RPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAE 532
RP+ + + VL+AC H GLVE+GL+ + +M++EYGI P R+ +CVVDLL RAG++ EA
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 533 DFINQMAFDDDIVVWKSLLASCKTHG-NVDVGKRAAENILKIDPTNSAALVLLCNIYASS 591
+ + +M F D W ++L +CK H N + + AA ++++ P V+L IYA+
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAE 531
Query: 592 GKWEEVARLMGSMKERGVRKVPGQSWIEIQTKI 624
GKW + AR+ M+ G +K G SWI ++ ++
Sbjct: 532 GKWVDFARVRKMMRMMGNKKEAGMSWILVENQV 564
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 183/408 (44%), Gaps = 71/408 (17%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCG-SLEDARMVFDE 140
T + ++ +C +++ L G VH ++ + + N ++NMY C ++E A ++F +
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+ +N V+WT +I G + G +++Y QML + +RA + + V G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+HA VIK S+L N+++ +Y + + +A + F + KD+ +W ++I
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI------ 286
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+E+E S+++EA+ +F + +P+ T SL+ AC
Sbjct: 287 -------SELER----------------SDSSEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Query: 321 TSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA------------------------ 356
+ +L G Q+H I ++GF NV + NA++ A
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSW 383
Query: 357 -------------GELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMK 403
E LF M++S +PD I F V+ AC +E G + + +M+
Sbjct: 384 TSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-YFNVME 442
Query: 404 T--GLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+ G+ D + N ++D+ + G +G A EL M PD +W +++
Sbjct: 443 SEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 150/317 (47%), Gaps = 33/317 (10%)
Query: 75 NFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDA 134
N + P + A +S+ S+ G+++H ++ Q + + N IL++Y +CG L +A
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEA 267
Query: 135 RMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGL 194
+ F EM +++++W +I+ ++ A + ++ + G +P+ +TF S++ AC+ +
Sbjct: 268 KHYFHEMEDKDLITWNTLISELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACANI 326
Query: 195 CCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSM 253
+ G+QLH + + ++ NALI MY K I D+ VF I R+++ SW SM
Sbjct: 327 AALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSM 386
Query: 254 IDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTV 313
+ G+ + EA+ LF +M + PD +
Sbjct: 387 MIGYGSHGYGA----------------------------EAVELFDKMVSSGIRPDRIVF 418
Query: 314 RSLLCACTSPLSLYQGMQIHSYIIKK-GFYSNVPVCNAI--LQHQAGELFRLFSLMLASQ 370
++L AC + +G++ + + + G + + N + L +AG++ + L+
Sbjct: 419 MAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 371 TKPDHITFNDVMGACAA 387
KPD T+ ++GAC A
Sbjct: 479 FKPDESTWGAILGACKA 495
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 304/582 (52%), Gaps = 31/582 (5%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLR-----SLQLGRKVHDHILSSKCQPDAV-LHNHIL 122
F+ N+ + P +Y L+S+ L+ GR+VH H++++ V + N ++
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 123 NMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQF 182
NMY KCGS+ DAR VF M ++ VSW +MI G QNG A+E Y M + ++P F
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 183 TFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSI 242
T S + +C+ L LG+Q+H +K ++ NAL+ +Y + + + +FSS+
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 243 ARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAG------VASCSNANEAMS 296
D SW S+I ++ + + + N AG S + +
Sbjct: 477 PEHDQVSWNSIIGALARSE------RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 297 LFSEMGD-------RELIPDGLTVRSLLCACTSPLSLYQGMQ-IHSYIIKK--GFYSNVP 346
F E+G + I D T + L AC G + I S + ++ N
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 347 VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+ I + L ML + + D + V+ A A++A+LE G ++H ++ L
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
DV V + L+DMY KCG L A FN M + SW+S+I GYA+ G GEEALKLF
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 467 MRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARA 525
M+ G P+HVT VGVL+ACSH GL+EEG + + M + YG+ P E SC+ D+L RA
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770
Query: 526 GRVHEAEDFINQMAFDDDIVVWKSLL-ASCKTHG-NVDVGKRAAENILKIDPTNSAALVL 583
G + + EDFI +M ++++W+++L A C+ +G ++GK+AAE + +++P N+ VL
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 830
Query: 584 LCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
L N+YA+ G+WE++ + MK+ V+K G SW+ ++ +H
Sbjct: 831 LGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 872
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 228/503 (45%), Gaps = 80/503 (15%)
Query: 99 GRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQ 158
R H + ++ D L N+++N Y + G AR VFDEMP RN VSW +++G S+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 159 NGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL--GRQLHAHVIKSEHGSHL 216
NG+ A+ M++ G+ +Q+ F S++RAC + VG+ GRQ+H + K +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 217 ISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLA 276
+ N LI+MY W S+ +A F ++E N
Sbjct: 140 VVSNVLISMY---------WKCIGSVG------------------YALCAFGDIEVKNSV 172
Query: 277 SWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL---CACTSP-LSLYQGMQI 332
SWN+II+ + + A +FS M P T SL+ C+ T P + L + QI
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE--QI 230
Query: 333 HSYIIKKGFYSNVPVCNAILQ--HQAGELFRLFSLMLASQTKPDHITFNDVM-------- 382
I K G +++ V + ++ ++G L + +T+ + +T N +M
Sbjct: 231 MCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVRQKW 289
Query: 383 -------------------------------GACAAMASLEMGTQLHCYIMKTGLA-LDV 410
+ A L+ G ++H +++ TGL V
Sbjct: 290 GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 411 FVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
+ NGL++MY KCGS+ AR +F FM D D VSW+S+I G Q GC EA++ ++ MR
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH 409
Query: 471 GVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHE 530
+ P TL+ L++C+ + + G Q++ + GI + ++ L A G ++E
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHG-ESLKLGIDLNVSVSNALMTLYAETGYLNE 468
Query: 531 AEDFINQMAFDDDIVVWKSLLAS 553
+ M + D V W S++ +
Sbjct: 469 CRKIFSSMP-EHDQVSWNSIIGA 490
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 241/555 (43%), Gaps = 87/555 (15%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA--DLISACSSLRSLQL--GRKVHDH 105
+ S + + EALV FL++ I + YA ++ AC + S+ + GR++H
Sbjct: 73 IVSGYSRNGEHKEALV---FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129
Query: 106 ILSSKCQPDAVLHNHILNMYGKC-GSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENA 164
+ DAV+ N +++MY KC GS+ A F ++ +N VSW ++I+ SQ G + +
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189
Query: 165 AIELYVQMLQSGLMPDQFTFGSIIRACSGLC--CVGLGRQLHAHVIKSEHGSHLISQNAL 222
A ++ M G P ++TFGS++ L V L Q+ + KS + L + L
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL 249
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
++ + K L +AR VFN+ME+ N + N ++
Sbjct: 250 VSAFAK----------------------------SGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 283 AGVASCSNANEAMSLFSEMGDR-ELIPDGLTVRSLLC-----ACTSPLSLYQGMQIHSYI 336
G+ EA LF +M ++ P+ + LL + + L +G ++H ++
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHV 339
Query: 337 IKKGFYS-NVPVCNAILQHQA-----GELFRLFSLMLASQTK------------------ 372
I G V + N ++ A + R+F M +
Sbjct: 340 ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEA 399
Query: 373 -------------PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDM 419
P T + +CA++ ++G Q+H +K G+ L+V V N LM +
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 420 YVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG-EEALKLFRRMRSSGVRPNHVT 478
Y + G L R++F+ M + D VSW+S+I A+ EA+ F + +G + N +T
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRIT 519
Query: 479 LVGVLTACSHVGLVEEGLQLYRI-MQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQ 537
VL+A S + E G Q++ + ++N T E + ++ + G + E ++
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE--NALIACYGKCGEMDGCEKIFSR 577
Query: 538 MAFDDDIVVWKSLLA 552
MA D V W S+++
Sbjct: 578 MAERRDNVTWNSMIS 592
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 148/345 (42%), Gaps = 54/345 (15%)
Query: 263 ARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTS 322
AR VF+EM N SW I++G + EA+ +M + + S+L AC
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 323 --PLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------------------------- 353
+ + G QIH + K + + V N ++
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 354 -------HQAGE---LFRLFSLMLASQTKPDHITFND-VMGACA-AMASLEMGTQLHCYI 401
QAG+ FR+FS M ++P TF V AC+ + + Q+ C I
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
K+GL D+FV +GL+ + K GSL AR++FN ME + V+ + L+VG + GEEA
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 462 KLFRRMRSS-GVRPNHVTLVGVLTACSHVGLVEE-GLQLYRIMQNEYGIIPTRERRSCV- 518
KLF M S V P + V +L++ L EE GL+ R + +I T V
Sbjct: 295 KLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGH--VITTGLVDFMVG 350
Query: 519 -----VDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
V++ A+ G + +A M D D V W S++ +G
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNG 394
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 296/585 (50%), Gaps = 64/585 (10%)
Query: 77 RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARM 136
+ P + + SL ++ +H I+ +A + ++N Y CGS++ AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 137 VFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCC 196
VF+ + +++V W +++ +NG +++L M +G MP+ +TF + ++A GL
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 197 VGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDG 256
+ +H ++K+ + L+ +YT+ G M D
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL---------------------GDMSDA 301
Query: 257 FSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
F VFNEM ++ W+ +IA NEA+ LF M + ++P+ T+ S+
Sbjct: 302 FK-------VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSI 354
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ----------------------- 353
L C G Q+H ++K GF ++ V NA++
Sbjct: 355 LNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE 414
Query: 354 -------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
+ G+ F +F L +Q +TF+ +GACA++AS+++G Q+H
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGL 474
Query: 401 IMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEA 460
+KT A V V N L+DMY KCG + A+ +FN ME DV SW++LI GY+ G G +A
Sbjct: 475 AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 461 LKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVD 520
L++ M+ +PN +T +GVL+ CS+ GL+++G + + M ++GI P E +C+V
Sbjct: 535 LRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVR 594
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAA 580
LL R+G++ +A I + ++ +++W+++L++ N + +R+AE ILKI+P + A
Sbjct: 595 LLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEAT 654
Query: 581 LVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
VL+ N+YA + +W VA + SMKE GV+K PG SWIE Q +H
Sbjct: 655 YVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 40/212 (18%)
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+HC I+K G LD+F N L++ YVK G A LF+ M + + VS+ +L GYA C
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA---C 127
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
++ + L+ R+ G N HV L+L+ + ++ I P
Sbjct: 128 -QDPIGLYSRLHREGHELN-----------PHV--FTSFLKLF-VSLDKAEICPW----- 167
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
+H I ++ +D + V +L+ + G+VD + E IL D
Sbjct: 168 -----------LHSP---IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIV 213
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERG 608
A +V + Y +G +E+ +L+ M+ G
Sbjct: 214 VWAGIV---SCYVENGYFEDSLKLLSCMRMAG 242
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 195/601 (32%), Positives = 304/601 (50%), Gaps = 78/601 (12%)
Query: 61 NEALVAFDFLQN--NTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLH 118
N+A A + + ++ I T +ISAC + +VH + S D+ +
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 119 NHILNMYGKCGSLEDARMVF---DEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQS 175
+++MY K G ++ + VF D++ ++N+V+ MI SQ+ + AI L+ +MLQ
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 176 GLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDA 235
GL D+F+ S++ S L C+ LG+Q+H + +KS L ++L +Y+K + ++
Sbjct: 448 GLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 236 WNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAM 295
+ +F I KD W SMI GF++ + R EA+
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLR----------------------------EAI 536
Query: 296 SLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF-------------- 341
LFSEM D PD T+ ++L C+S SL +G +IH Y ++ G
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 342 ------------YSNVP-----VCNAIL----QH---QAGELFRLFSLMLASQTKPDHIT 377
Y +P C++++ QH Q G F LF M+ S D
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG--FLLFRDMVMSGFTMDSFA 654
Query: 378 FNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+ ++ A A +G Q+H YI K GL + V + L+ MY K GS+ + F+ +
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN 714
Query: 438 DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQ 497
PD+++W++LI YAQ G EAL+++ M+ G +P+ VT VGVL+ACSH GLVEE
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF 774
Query: 498 LYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTH 557
M +YGI P C+VD L R+GR+ EAE FIN M D +VW +LLA+CK H
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIH 834
Query: 558 GNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSW 617
G V++GK AA+ ++++P+++ A + L NI A G+W+EV MK GV+K PG S
Sbjct: 835 GEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSS 894
Query: 618 I 618
+
Sbjct: 895 V 895
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 151/600 (25%), Positives = 258/600 (43%), Gaps = 82/600 (13%)
Query: 10 HLPRWCCEYWDAFELCMLLD---QAGEVVDSFLRRFDDIWDFD------LFSSLCKQNLY 60
HL R +D F LL +G + D+ + FD I D + S + L+
Sbjct: 73 HLLRRYLLPFDVFLTKSLLSWYSNSGSMADA-AKLFDTIPQPDVVSCNIMISGYKQHRLF 131
Query: 61 NEALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNH 120
E+L F + + F +Y +ISACS+L++ V H + V+ +
Sbjct: 132 EESLRFFSKM-HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESA 190
Query: 121 ILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPD 180
+++++ K EDA VF + NV W +IAG +N A +L+ +M PD
Sbjct: 191 LIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPD 250
Query: 181 QFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFS 240
+T+ S++ AC+ L + G+ + A VIK + A++ +Y K + +A VFS
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKC-GAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 241 SIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSE 300
I + SW M+ G++K ++A A+ +F E
Sbjct: 310 RIPNPSVVSWTVMLSGYTK----------------------------SNDAFSALEIFKE 341
Query: 301 MGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL-------- 352
M + + TV S++ AC P + + Q+H+++ K GFY + V A++
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 353 -----------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+ G+ RLF+ ML + D + V
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS---VCS 458
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
+ + L +G Q+H Y +K+GL LD+ V + L +Y KCGSL + +LF + D
Sbjct: 459 LLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC 518
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQ 503
W+S+I G+ ++G EA+ LF M G P+ TL VLT CS + G +++
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 504 NEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG 563
GI + S +V++ ++ G + A +++ + D V SL++ HG + G
Sbjct: 579 RA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQDG 636
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 242/519 (46%), Gaps = 75/519 (14%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKC-QPDAVLHNHILNMYGKCGSLEDARMVFDE 140
TY+ +++AC+SL L+ G+ V ++ KC D + I+++Y KCG + +A VF
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
+P +VVSWT M++G +++ +A+E++ +M SG+ + T S+I AC V
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 201 RQLHAHVIKSEHGSHLISQ--NALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFS 258
Q+HA V KS G +L S ALI+MY+K I + VF +
Sbjct: 371 SQVHAWVFKS--GFYLDSSVAAALISMYSKSGDIDLSEQVFEDL---------------- 412
Query: 259 KLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLC 318
++++ N+ N +I + +A+ LF+ M L D +V SLL
Sbjct: 413 ---------DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 319 ACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAGELFR--------- 361
L G Q+H Y +K G ++ V +++ ++ +LF+
Sbjct: 462 VLD---CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC 518
Query: 362 -------------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIM 402
LFS ML T PD T V+ C++ SL G ++H Y +
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 403 KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALK 462
+ G+ + + + L++MY KCGSL AR++++ + + D VS SSLI GY+Q G ++
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL 638
Query: 463 LFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLL 522
LFR M SG + + +L A + G Q++ + + G+ S ++ +
Sbjct: 639 LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI-TKIGLCTEPSVGSSLLTMY 697
Query: 523 ARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVD 561
++ G + + +Q+ D++ W +L+AS HG +
Sbjct: 698 SKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHGKAN 735
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 239/553 (43%), Gaps = 84/553 (15%)
Query: 91 SSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSW 149
S L +L+ + + H+L P D L +L+ Y GS+ DA +FD +PQ +VVS
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 150 TAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIK 209
MI+G Q+ ++ + +M G ++ ++GS+I ACS L + H IK
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 210 SEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNE 269
+ + + ++ALI +++K R DA+ VF +
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYK----------------------------VFRD 210
Query: 270 MESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQG 329
S N+ WNTIIAG N LF EM PD T S+L AC S L G
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG 270
Query: 330 MQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFS-----------LMLASQTKP 373
+ + +IK G +V VC AI+ A E +FS +ML+ TK
Sbjct: 271 KVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 374 --------------------DHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
++ T V+ AC + + +Q+H ++ K+G LD V
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 414 NGLMDMYVKCGSLGSARELFNFMED---PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSS 470
L+ MY K G + + ++F ++D ++V + +I ++Q +A++LF RM
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 471 GVRPNHVTLVGVLTA--CSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
G+R + ++ +L+ C ++G G L + G++ S + L ++ G +
Sbjct: 448 GLRTDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHG----NVDVGKRAAENILKIDPTNSAALVLL 584
E+ + F D+ W S+++ +G + + ++ D + AA++ +
Sbjct: 502 EESYKLFQGIPFKDN-ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 585 CNIYASSGKWEEV 597
C+ + S + +E+
Sbjct: 561 CSSHPSLPRGKEI 573
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 306 bits (783), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 290/551 (52%), Gaps = 23/551 (4%)
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ C++L + +++H I+ D + +++ C A VF+++ + NV
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
++I +QN Q A ++ +M + GL D FT+ +++ACSG + + + +H H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 207 VIKSEHGSHLISQNALIAMYTKFDR--ILDAWNVFSSIARKDITSWGSMIDGFSK---LD 261
+ K S + NALI Y++ + DA +F ++ +D SW SM+ G K L
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 262 FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACT 321
AR +F+EM +L SWNT++ G A C ++A LF +M +R + V A
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 262
Query: 322 SPLS--LYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFSLMLASQTKPD 374
++ ++ M + + NV I+ A E RL M+AS K D
Sbjct: 263 MEMARVMFDKMPLPA--------KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 375 HITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFN 434
++ AC L +G ++H + ++ L + +V+N L+DMY KCG+L A ++FN
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
Query: 435 FMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEE 494
+ D+VSW++++ G G G+EA++LF RMR G+RP+ VT + VL +C+H GL++E
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 434
Query: 495 GLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASC 554
G+ + M+ Y ++P E C+VDLL R GR+ EA + M + ++V+W +LL +C
Sbjct: 435 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 494
Query: 555 KTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPG 614
+ H VD+ K +N++K+DP + LL NIYA++ WE VA + MK GV K G
Sbjct: 495 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 554
Query: 615 QSWIEIQTKIH 625
S +E++ IH
Sbjct: 555 ASSVELEDGIH 565
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 179/419 (42%), Gaps = 57/419 (13%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL--EDARMVFD 139
TY L+ ACS L + + +H+HI D + N +++ Y +CG L DA +F+
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
+M +R+ VSW +M+ G + G+ A L+ +M Q
Sbjct: 179 KMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ------------------------- 213
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
LIS N ++ Y + + A+ +F + ++ SW +M+ G+SK
Sbjct: 214 --------------RDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSK 259
Query: 260 ---LDFARTVFNEMESP--NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVR 314
++ AR +F++M P N+ +W IIAG A EA L +M L D V
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 315 SLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA--GELFRLFSLMLASQTK 372
S+L ACT L GM+IHS + + SN V NA+L A G L + F + K
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV-FNDIPK 378
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSAREL 432
D +++N ++ + +L + + G+ D ++ G + +
Sbjct: 379 KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDY 438
Query: 433 FNFMED-----PDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
F ME P V + L+ + G +EA+K+ + M + PN V +L AC
Sbjct: 439 FYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGAC 494
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 107/196 (54%), Gaps = 17/196 (8%)
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
+++AC+ L LG ++H + S +A + N +L+MY KCG+L+ A VF+++P+++
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRAC--SGLCCVGLG--- 200
+VSW M+ G +G AIEL+ +M + G+ PD+ TF +++ +C +GL G+
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 201 --RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMIDG- 256
+++ V + EH L+ + + R+ +A V ++ ++ WG+++
Sbjct: 441 SMEKVYDLVPQVEH------YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 494
Query: 257 --FSKLDFARTVFNEM 270
+++D A+ V + +
Sbjct: 495 RMHNEVDIAKEVLDNL 510
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/637 (28%), Positives = 328/637 (51%), Gaps = 71/637 (11%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYAD 85
+D ++ D L++ IW+ + + K + + F ++ + +I P+ T+
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNV-MLNGYAKCGALDSVIKGFSVMRMD---QISPNAVTFDC 244
Query: 86 LISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
++S C+S + LG ++H ++ S + + N +L+MY KCG +DA +F M + +
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
V+W MI+G Q+G ++ + +M+ SG++PD TF S++ + S + +Q+H
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC 364
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
++++ + +ALI Y K + A N+FS D+ + +MI G+
Sbjct: 365 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY-------- 416
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLS 325
+ N + +++ +F + ++ P+ +T+ S+L L+
Sbjct: 417 LHNGLYI--------------------DSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 326 LYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------ELFR---------------- 361
L G ++H +IIKKGF + + A++ A E+F
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 362 ------------LFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALD 409
+F M S D ++ + + ACA + S G +H +++K LA D
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 410 VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRM-R 468
V+ + L+DMY KCG+L +A +F M++ ++VSW+S+I G +++L LF M
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 469 SSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRV 528
SG+RP+ +T + ++++C HVG V+EG++ +R M +YGI P +E +CVVDL RAGR+
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696
Query: 529 HEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIY 588
EA + + M F D VW +LL +C+ H NV++ + A+ ++ +DP+NS VL+ N +
Sbjct: 697 TEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAH 756
Query: 589 ASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
A++ +WE V ++ MKER V+K+PG SWIEI + H
Sbjct: 757 ANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTH 793
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 239/531 (45%), Gaps = 72/531 (13%)
Query: 70 LQNNTNF--RIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGK 127
L+N++ F P + L+ ACS+ L+ G++VH ++ + D+ IL MY
Sbjct: 23 LRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAM 82
Query: 128 CGSLEDARMVFDEMPQR--NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFG 185
CGS D +F + R ++ W ++I+ +NG N A+ Y +ML G+ PD TF
Sbjct: 83 CGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFP 142
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
+++AC L L V + ++LI Y ++ +I +F + +K
Sbjct: 143 CLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202
Query: 246 DITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRE 305
D W M++G++K C + + FS M +
Sbjct: 203 DCVIWNVMLNGYAK----------------------------CGALDSVIKGFSVMRMDQ 234
Query: 306 LIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQ--------HQAG 357
+ P+ +T +L C S L + G+Q+H ++ G + N++L A
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294
Query: 358 ELFRL----------------------------FSLMLASQTKPDHITFNDVMGACAAMA 389
+LFR+ F M++S PD ITF+ ++ + +
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+LE Q+HCYIM+ ++LD+F+ + L+D Y KC + A+ +F+ DVV ++++I
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 450 GYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGII 509
GY G ++L++FR + + PN +TLV +L + ++ G +L+ + +
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG--F 472
Query: 510 PTRERRSC-VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGN 559
R C V+D+ A+ GR++ A + +++ DIV W S++ C N
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/553 (23%), Positives = 253/553 (45%), Gaps = 72/553 (13%)
Query: 46 WDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRP--STYADLISACSSLRSLQLGRKVH 103
W+ + SS + L N+AL AF F F + P ST+ L+ AC +L++ + +
Sbjct: 106 WN-SIISSFVRNGLLNQAL-AFYF--KMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 104 DHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQEN 163
D + S + + + ++ Y + G ++ +FD + Q++ V W M+ G ++ G +
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 164 AAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALI 223
+ I+ + M + P+ TF ++ C+ + LG QLH V+ S +N+L+
Sbjct: 222 SVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 224 AMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIA 283
+MY+K R DA +F ++R D +W MI G+ + +
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY-----------------------VQS 318
Query: 284 GVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYS 343
G+ E+++ F EM ++PD +T SLL + + +L QIH YI++
Sbjct: 319 GL-----MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 344 NVPVCNAILQ--------HQAGELF----------------------------RLFSLML 367
++ + +A++ A +F +F ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 368 ASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLG 427
+ P+ IT ++ + +L++G +LH +I+K G + ++DMY KCG +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 428 SARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
A E+F + D+VSW+S+I AQ A+ +FR+M SG+ + V++ L+AC+
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
++ G ++ M ++ + S ++D+ A+ G + A + M + +IV W
Sbjct: 554 NLPSESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSW 611
Query: 548 KSLLASCKTHGNV 560
S++A+C HG +
Sbjct: 612 NSIIAACGNHGKL 624
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 370 QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSA 429
+T P ++ ++ AC+ L G Q+H +++ ++ D + ++ MY CGS
Sbjct: 32 ETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC 89
Query: 430 RELFNFME--DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACS 487
++F ++ + W+S+I + + G +AL + +M GV P+ T ++ AC
Sbjct: 90 GKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV 149
Query: 488 HVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVW 547
++N GI D L+ D ++ + D + V
Sbjct: 150 A-------------LKNFKGI-----------DFLS---------DTVSSLGMDCNEFVA 176
Query: 548 KSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMK 605
SL+ + +G +DV + + +L+ D ++ N YA G + V + M+
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKD---CVIWNVMLNGYAKCGALDSVIKGFSVMR 231
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/655 (30%), Positives = 314/655 (47%), Gaps = 119/655 (18%)
Query: 83 YADLISACSSLRSLQLGRKVHDHIL--SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDE 140
+ L+ C R+L LG+ +H H+L S VL N + +Y C +E AR VFDE
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 141 MPQR--NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVG 198
+P N ++W MI + N A++LY +ML SG+ P ++T+ +++AC+GL +
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 199 LGRQLHAHVIKSEHGSHLISQNALIAMYTK----------FD----RILDAWN------- 237
G+ +H+HV S+ + + AL+ Y K FD R + AWN
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 238 ------------------------------VFSSIARKDITSWGSMIDGFSK-------- 259
+F ++ R G + G+
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 260 ------LD---------FARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEM--G 302
LD +AR VF+ N +W+ +I G EA +F +M
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 303 DRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG----- 357
D + + + +L C L G +H Y +K GF ++ V N I+ A
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 358 -------------------------------ELFRLFSLMLASQTKPDHITFNDVMGACA 386
E FRLF M S +PD T V+ AC+
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 387 AMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSS 446
+A+L G+ H Y + G A++ + N LMDMY KCG L A+ +F+ M D+VSW++
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 447 LIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM-QNE 505
++ G+ G G+EAL LF M+ +GV P+ VTL+ +L+ACSH GLV+EG QL+ M + +
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
Query: 506 YGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKR 565
+ +IP + +C+ DLLARAG + EA DF+N+M F+ DI V +LL++C T+ N ++G
Sbjct: 541 FNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNE 600
Query: 566 AAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEI 620
++ + + T + +LVLL N Y+++ +WE+ AR+ K+RG+ K PG SW+++
Sbjct: 601 VSKKMQSLGET-TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 34/354 (9%)
Query: 65 VAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNM 124
V F L N+ + P ++ C+ L GR VH + + + D + N I++
Sbjct: 293 VFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISF 352
Query: 125 YGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTF 184
Y K GSL DA F E+ ++V+S+ ++I GC N + + L+ +M SG+ PD T
Sbjct: 353 YAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTL 412
Query: 185 GSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIAR 244
++ ACS L +G G H + + + + NAL+ MYTK ++ A VF ++ +
Sbjct: 413 LGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK 472
Query: 245 KDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDR 304
+DI SW +M+ GF I G+ EA+SLF+ M +
Sbjct: 473 RDIVSWNTMLFGFG-----------------------IHGL-----GKEALSLFNSMQET 504
Query: 305 ELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGEL 359
+ PD +T+ ++L AC+ + +G Q+ + + +G ++ +P C L +AG L
Sbjct: 505 GVNPDEVTLLAILSACSHSGLVDEGKQLFNS-MSRGDFNVIPRIDHYNCMTDLLARAGYL 563
Query: 360 FRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVM 413
+ + +PD ++ AC + E+G ++ + G + V+
Sbjct: 564 DEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVL 617
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 268/499 (53%), Gaps = 46/499 (9%)
Query: 170 VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKF 229
VQ+L P T+ ++I+ CS + G+++H H+ S ++ N L+ MY K
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 230 DRILDAWNVFSSIARKDITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVA 286
++DA VF + +D+ SW M++G+++ L+ AR +F+EM + SW ++ G
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 287 SCSNANEAMSLFSEMGDRELIPDG----LTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
EA+ L+S M + +P+ TV + A + + +G +IH +I++ G
Sbjct: 194 KKDQPEEALVLYSLM---QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 343 SNVPVCNAILQHQAG------------------------------------ELFRLFSLM 366
S+ + ++++ E F LFS +
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+ S +P+ TF V+ ACA + + E+G Q+H Y+ + G F + L+DMY KCG++
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
SA+ + + PD+VSW+SLI G AQ G +EALK F + SG +P+HVT V VL+AC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
+H GLVE+GL+ + + ++ + T + +C+VDLLAR+GR + + I++M +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKE 606
W S+L C T+GN+D+ + AA+ + KI+P N V + NIYA++GKWEE ++ M+E
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 607 RGVRKVPGQSWIEIQTKIH 625
GV K PG SW EI+ K H
Sbjct: 551 IGVTKRPGSSWTEIKRKRH 569
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 233/557 (41%), Gaps = 122/557 (21%)
Query: 29 DQAGEVVDSFLR--RFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
+ G VV+ R RF + D LC Q L EA+ + + STY +L
Sbjct: 42 EDGGVVVERLCRANRFGEAIDV-----LCGQKLLREAVQLLGRAK-----KPPASTYCNL 91
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSL--------------- 131
I CS R+L+ G+KVH+HI +S P V+ N +L MY KCGSL
Sbjct: 92 IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151
Query: 132 ----------------EDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQ- 174
E+AR +FDEM +++ SWTAM+ G + Q A+ LY M +
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
Query: 175 SGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILD 234
P+ FT + A + + C+ G+++H H++++ S + ++L+ MY K I +
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271
Query: 235 AWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEA 294
A N+F I KD+ SW SMID + K S E
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFK----------------------------SSRWREG 303
Query: 295 MSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGF--YS--------- 343
SLFSE+ P+ T +L AC + G Q+H Y+ + GF YS
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDM 363
Query: 344 -----NVPVCNAIL--------------------QHQAGELFRLFSLMLASQTKPDHITF 378
N+ ++ Q E + F L+L S TKPDH+TF
Sbjct: 364 YTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 379 NDVMGACAAMASLEMGTQLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME 437
+V+ AC +E G + I K L+ L+D+ + G + + + M
Sbjct: 424 VNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP 483
Query: 438 -DPDVVSWSSLIVGYAQFG----CGEEALKLFRRMRSSGVRP-NHVTLVGVLTACSHVGL 491
P W+S++ G + +G E A +LF+ + P N VT V + + G
Sbjct: 484 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAGK 537
Query: 492 VEEGLQLYRIMQNEYGI 508
EE ++ + MQ E G+
Sbjct: 538 WEEEGKMRKRMQ-EIGV 553
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 229/499 (45%), Gaps = 77/499 (15%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
LL++A ++ D + W + + K++ EALV + +Q N R T +
Sbjct: 166 LLEEARKLFDEMTEKDSYSWT-AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
++A ++++ ++ G+++H HI+ + D VL + +++MYGKCG +++AR +FD++ +++V
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
VSWT+MI ++ + L+ +++ S P+++TF ++ AC+ L LG+Q+H +
Sbjct: 285 VSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY 344
Query: 207 VIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTV 266
+ + + + ++L+ MYTK I A +V +DG K D
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHV---------------VDGCPKPD----- 384
Query: 267 FNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSL 326
L SW ++I G A +EA+ F + PD +T ++L ACT +
Sbjct: 385 --------LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 327 YQGMQIHSYIIKKGFYSNVP---VCNAILQHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+G++ I +K S+ C L ++G +L S++ KP + V+G
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVS 443
C+ ++++ + +A+ELF +E + V+
Sbjct: 497 GCSTYGNIDLAEE-------------------------------AAQELFK-IEPENPVT 524
Query: 444 WSSLIVGYAQFGCGEEALKLFRRMRSSGV------------RPNHVTLVGVLTACSHVGL 491
+ ++ YA G EE K+ +RM+ GV R HV + + + +
Sbjct: 525 YVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQI 584
Query: 492 VEEGLQLYRIMQNEYGIIP 510
VE +L + M+ E G +P
Sbjct: 585 VEFLRELRKKMKEE-GYVP 602
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 10/292 (3%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + C +D+A + D + + W + K + + E F L + R
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWT-SMIDRYFKSSRWREGFSLFSELVGSCE-RPN 318
Query: 80 PSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFD 139
T+A +++AC+ L + +LG++VH ++ P + + +++MY KCG++E A+ V D
Sbjct: 319 EYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD 378
Query: 140 EMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGL 199
P+ ++VSWT++I GC+QNGQ + A++ + +L+SG PD TF +++ AC+ V
Sbjct: 379 GCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438
Query: 200 GRQLHAHVIKSEHGSHLISQ-NALIAMYTKFDRILDAWNVFSSIARKDITS-WGSMIDG- 256
G + + + SH L+ + + R +V S + K W S++ G
Sbjct: 439 GLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC 498
Query: 257 --FSKLDFARTVFNEM---ESPNLASWNTIIAGVASCSNANEAMSLFSEMGD 303
+ +D A E+ E N ++ T+ A+ E + M +
Sbjct: 499 STYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 22/257 (8%)
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLM 417
+L R +L KP T+ +++ C+ +LE G ++H +I +G + + N L+
Sbjct: 68 KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 418 DMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHV 477
MY KCGSL AR++F+ M + D+ SW+ ++ GYA+ G EEA KLF M +
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSY 183
Query: 478 TLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAG-------RVHE 530
+ ++T EE L LY +MQ +P V + A R E
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQR----VPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 531 AEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYAS 590
I + D D V+W SL+ G +D + + I++ D + +++ + Y
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI---DRYFK 296
Query: 591 SGKWEE----VARLMGS 603
S +W E + L+GS
Sbjct: 297 SSRWREGFSLFSELVGS 313
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 292/600 (48%), Gaps = 93/600 (15%)
Query: 83 YADLISACSSLRSLQLGRKVHDHILSSKC--QPDAVLHNHILNMYGKCGSLEDARMVFDE 140
YA L AC+ R+L G +H H+LS + +L N ++NMY KCG++ AR VFD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 141 MPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG 200
MP+RNVVSWTA+I G Q G E L+ ML S P++FT S++ +C G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCR----YEPG 176
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKL 260
+Q+H +K + NA+I+MY G DG +
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMY------------------------GRCHDGAAAY 212
Query: 261 DFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCAC 320
+ A TVF ++ NL +WN++IA C+ +A+ +F M + G +LL C
Sbjct: 213 E-AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRATLLNIC 268
Query: 321 TSPLSLYQG------------MQIHSYIIKKGFYSNVPVCNAILQ--------------- 353
+S LY+ +Q+HS +K G + V A+++
Sbjct: 269 SS---LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKL 325
Query: 354 ----------------------HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
+ LF + + PD TF+ V+ ACA + +
Sbjct: 326 FMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
+H ++K G D + N L+ Y KCGSL +F+ M+ DVVSW+S++ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 452 AQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPT 511
+ G + L +F++M + P+ T + +L+ACSH G VEEGL+++R M + +P
Sbjct: 446 SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 512 RERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENIL 571
+CV+D+L+RA R EAE+ I QM D D VVW +LL SC+ HGN +GK AA+ +
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 572 K-IDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH--ASG 628
+ ++PTNS + + + NIY + G + E + M+ VRK P SW EI K+H ASG
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASG 622
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 82 TYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM 141
T++ ++ AC+ L + + +H ++ D VL+N +++ Y KCGSL+ VFD+M
Sbjct: 371 TFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDM 430
Query: 142 PQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLG- 200
R+VVSW +M+ S +GQ ++ + ++ +M + PD TF +++ ACS V G
Sbjct: 431 DSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGL 487
Query: 201 RQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
R + K E L +I M ++ +R +A V + D W +++
Sbjct: 488 RIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 312/596 (52%), Gaps = 56/596 (9%)
Query: 69 FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQP-DAVLHNHILNMYGK 127
L+ + I P T I+ S + + RK+ D S ++++ + N+ +
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 128 CGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ--FTFG 185
DAR +FDEMP RN++SW +++G +NG+ + A +++ LMP++ ++
Sbjct: 66 -----DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVF------DLMPERNVVSWT 114
Query: 186 SIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARK 245
++++ V + L + + +S ++ + + RI DA ++ I K
Sbjct: 115 ALVKGYVHNGKVDVAESLFWKMPEKNK----VSWTVMLIGFLQDGRIDDACKLYEMIPDK 170
Query: 246 DITSWGSMIDGFSK---LDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG 302
D + SMI G K +D AR +F+EM ++ +W T++ G + ++A +F M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 303 ---------------------DRELIPDGLTVRSLLCACTSPLS-LYQGMQIHSYIIKKG 340
D E + + + V+ ++ AC + +S L Q +I ++
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI-ACNAMISGLGQKGEIAK--ARRV 287
Query: 341 FYSNVPVCNAILQ-----HQAG----ELFRLFSLMLASQTKPDHITFNDVMGACAAMASL 391
F S +A Q H+ E LF LM +P T ++ CA++ASL
Sbjct: 288 FDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 392 EMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGY 451
G Q+H +++ +DV+V + LM MY+KCG L ++ +F+ D++ W+S+I GY
Sbjct: 348 HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 452 AQFGCGEEALKLFRRMRSSG-VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIP 510
A G GEEALK+F M SG +PN VT V L+ACS+ G+VEEGL++Y M++ +G+ P
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 511 TRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENI 570
+C+VD+L RAGR +EA + I+ M + D VW SLL +C+TH +DV + A+ +
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
Query: 571 LKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIHA 626
++I+P NS +LL N+YAS G+W +VA L MK R VRK PG SW E++ K+HA
Sbjct: 528 IEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHA 583
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 157/375 (41%), Gaps = 50/375 (13%)
Query: 28 LDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLI 87
+D+A E+ D R W + + + N ++A FD + T +
Sbjct: 188 VDEAREIFDEMSERSVITWT-TMVTGYGQNNRVDDARKIFDVMPEKTE-----------V 235
Query: 88 SACSSLRSLQLGRKVHDHILSSKCQP--DAVLHNHILNMYGKCGSLEDARMVFDEMPQRN 145
S S L ++ D + P + N +++ G+ G + AR VFD M +RN
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 146 VVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHA 205
SW +I +NG E A++L++ M + G+ P T SI+ C+ L + G+Q+HA
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 206 HVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFART 265
+++ + + + L+ MY K ++ + +F KDI W
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW--------------- 400
Query: 266 VFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMG-DRELIPDGLTVRSLLCACTSPL 324
N+II+G AS EA+ +F EM P+ +T + L AC+
Sbjct: 401 -------------NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 325 SLYQGMQIHSYIIKKGFYSNVPV-----CNAILQHQAGELFRLFSLMLASQTKPDHITFN 379
+ +G++I+ + + + P+ C + +AG ++ + +PD +
Sbjct: 448 MVEEGLKIYESM--ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505
Query: 380 DVMGACAAMASLEMG 394
++GAC + L++
Sbjct: 506 SLLGACRTHSQLDVA 520
Score = 36.2 bits (82), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Query: 25 CMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYA 84
C L ++ + D F + +W+ + S L EAL F + + + + T+
Sbjct: 379 CGELVKSKLIFDRFPSKDIIMWN-SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 85 DLISACSSLRSLQLGRKVHDHILSS-KCQPDAVLHNHILNMYGKCGSLEDARMVFDEMP- 142
+SACS ++ G K+++ + S +P + +++M G+ G +A + D M
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Query: 143 QRNVVSWTAMIAGCSQNGQENAA 165
+ + W +++ C + Q + A
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVA 520
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 299 bits (765), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 301/583 (51%), Gaps = 44/583 (7%)
Query: 84 ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQ 143
A L+SAC +R+ G +VH H +SS + +VL ++ Y +A+ + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 144 RNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQL 203
+ + W +IA ++N I Y +M+ G+ PD FT+ S+++AC V GR +
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 204 HAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDF- 262
H + S + S L NALI+MY +F + A +F + +D SW ++I+ ++
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 263 --ARTVFNEM----ESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
A +F++M ++ +WN I G N A+ L S M + D + +
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGF-------------YSNVP----------------V 347
L AC+ ++ G +IH I + YS +
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 348 C--NAILQ-----HQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCY 400
C N+I+ +++ E L ML + +P+ IT ++ CA +A+L+ G + HCY
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 401 IMKTGLALDVFVM-NGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEE 459
I++ D ++ N L+D+Y K G + +A+++ + M D V+++SLI GY G G
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGV 466
Query: 460 ALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVV 519
AL LF+ M SG++P+HVT+V VL+ACSH LV EG +L+ MQ EYGI P + SC+V
Sbjct: 467 ALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMV 526
Query: 520 DLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSA 579
DL RAG + +A+D I+ M + W +LL +C HGN +GK AAE +L++ P N
Sbjct: 527 DLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPG 586
Query: 580 ALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
VL+ N+YA++G W ++A + M++ GV+K PG +WI+ +
Sbjct: 587 YYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDS 629
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 189/475 (39%), Gaps = 107/475 (22%)
Query: 50 LFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKVHDHIL 107
L +S K L+ E + A+ + + IRP TY ++ AC + GR VH I
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKG---IRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 108 SSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE 167
S + + N +++MY + ++ AR +FD M +R+ VSW A+I + G + A E
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 168 LYVQMLQSGLMPDQFTFGSI-----------------------------------IRACS 192
L+ +M SG+ T+ I ++ACS
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
+ + LG+++H I S + +N LI MY+K + A VF + +W S
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNS 351
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
+I G+++L+ + EA L EM P+ +T
Sbjct: 352 IISGYAQLN----------------------------KSEEASHLLREMLVAGFQPNSIT 383
Query: 313 VRSLLCACTSPLSLYQGMQIHSYII-KKGFYSNVPVCNAIL------------------- 352
+ S+L C +L G + H YI+ +K F + N+++
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 353 -----------------QHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGT 395
Q + G LF M S KPDH+T V+ AC+ + G
Sbjct: 444 SKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGE 503
Query: 396 QLHCYIM-KTGLALDVFVMNGLMDMYVKCGSLGSARELFNFME-DPDVVSWSSLI 448
+L + + G+ + + ++D+Y + G L A+++ + M P +W++L+
Sbjct: 504 RLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLL 558
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 292/604 (48%), Gaps = 68/604 (11%)
Query: 62 EALVAFDFLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHI 121
E+L+ F ++ F T+ + AC+ L + VH H++ S D +
Sbjct: 35 ESLLLFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 122 LNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQ 181
++M+ KC S++ A VF+ MP+R+ +W AM++G Q+G + A L+ +M + + PD
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 182 FTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSS 241
T ++I++ S + L +HA I+ + N I+ Y K + A VF +
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 242 IARKD--ITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFS 299
I R D + SW SM +S VF E A +A L+
Sbjct: 214 IDRGDRTVVSWNSMFKAYS-------VFGE---------------------AFDAFGLYC 245
Query: 300 EMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAIL------- 352
M E PD T +L +C +P +L QG IHS+ I G ++ N +
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 353 -----------------------------QHQAGELFRLFSLMLASQTKPDHITFNDVMG 383
+ E LF M+ S KPD +T ++
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 384 ACAAMASLEMGTQLHCYIMKTGLALD-VFVMNGLMDMYVKCGSLGSARELFNFMEDPDVV 442
C SLE G + G D V + N L+DMY KCGS+ AR++F+ + VV
Sbjct: 366 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 443 SWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM 502
+W+++I GYA G EALKLF +M +PNH+T + VL AC+H G +E+G + + IM
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 503 QNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDV 562
+ Y I P + SC+VDLL R G++ EA + I M+ D +W +LL +CK H NV +
Sbjct: 486 KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKI 545
Query: 563 GKRAAENILKIDPTNSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQT 622
++AAE++ ++P +A V + NIYA++G W+ AR+ MK+R ++K PG+S I++
Sbjct: 546 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNG 605
Query: 623 KIHA 626
K H+
Sbjct: 606 KNHS 609
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 196/458 (42%), Gaps = 79/458 (17%)
Query: 145 NVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLH 204
+V +W I ++ L+ +M + G P+ FTF + +AC+ L VG +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 205 AHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFAR 264
AH+IKS S + A + M+ K + + D+A
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSV----------------------------DYAA 107
Query: 265 TVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPL 324
VF M + +WN +++G + ++A SLF EM E+ PD +TV +L+ + +
Sbjct: 108 KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK 167
Query: 325 SLYQGMQIHSYIIKKGFYSNVPVCNAILQH------------------------------ 354
SL +H+ I+ G V V N +
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 355 --------QAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGL 406
+A + F L+ LML + KPD TF ++ +C +L G +H + + G
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 287
Query: 407 ALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRR 466
D+ +N + MY K SAR LF+ M VSW+ +I GYA+ G +EAL LF
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 467 MRSSGVRPNHVTLVGVLTACSHVGLVEEG------LQLYRIMQNEYGIIPTRERRSCVVD 520
M SG +P+ VTL+ +++ C G +E G +Y ++ I + ++D
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC------NALID 401
Query: 521 LLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHG 558
+ ++ G +HEA D + + +V W +++A +G
Sbjct: 402 MYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNG 438
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 197/651 (30%), Positives = 321/651 (49%), Gaps = 73/651 (11%)
Query: 20 DAFELCMLLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIR 79
D + LL +A +V D R W+ L S Y EAL + L+N+ I
Sbjct: 149 DMYSRMGLLTRARQVFDEMPVRDLVSWN-SLISGYSSHGYYEEALEIYHELKNSW---IV 204
Query: 80 PSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMV 137
P ++ + ++ A +L ++ G+ +H L S V++N ++ MY K DAR V
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 138 FDEMPQRNVVSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCV 197
FDEM R+ VS+ MI G + ++ ++++ L PD T S++RAC L +
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDL 323
Query: 198 GLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGF 257
L + ++ +++K+ +N LI +Y K G MI
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAK---------------------CGDMIT-- 360
Query: 258 SKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLL 317
AR VFN ME + SWN+II+G + EAM LF M E D +T L+
Sbjct: 361 -----ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 318 CACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQA-----GELFRLFS-------- 364
T L G +HS IK G ++ V NA++ A G+ ++FS
Sbjct: 416 SVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV 475
Query: 365 -----------------------LMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYI 401
M S+ PD TF + CA++A+ +G ++HC +
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 402 MKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEAL 461
++ G ++ + N L++MY KCG L ++ +F M DVV+W+ +I Y +G GE+AL
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 462 KLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDL 521
+ F M SG+ P+ V + ++ ACSH GLV+EGL + M+ Y I P E +CVVDL
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 522 LARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAAL 581
L+R+ ++ +AE+FI M D +W S+L +C+T G+++ +R + I++++P +
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 582 VLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH--ASGND 630
+L N YA+ KW++V+ + S+K++ + K PG SWIE+ +H +SG+D
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDD 766
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/587 (26%), Positives = 282/587 (48%), Gaps = 78/587 (13%)
Query: 45 IWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPS--TYADLISACSSLRSLQLGRKV 102
+W+ + + K L+ EAL + L+ + ++ P T+ +I AC+ L ++G V
Sbjct: 73 LWN-SIIRAFSKNGLFPEALEFYGKLRES---KVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 103 HDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQE 162
++ IL + D + N +++MY + G L AR VFDEMP R++VSW ++I+G S +G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 163 NAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNAL 222
A+E+Y ++ S ++PD FT S++ A L V G+ LH +KS S ++ N L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 223 IAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTII 282
+AMY KF R DA VF + +D S+ +MI G+ KL+
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM-------------------- 288
Query: 283 AGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFY 342
E++ +F E D + PD LTV S+L AC L I++Y++K GF
Sbjct: 289 --------VEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 343 SNVPVCNAILQH---------------------------------QAGEL---FRLFSLM 366
V N ++ Q+G+L +LF +M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 367 LASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSL 426
+ + + DHIT+ ++ +A L+ G LH +K+G+ +D+ V N L+DMY KCG +
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEV 459
Query: 427 GSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNHVTLVGVLTAC 486
G + ++F+ M D V+W+++I +FG L++ +MR S V P+ T + L C
Sbjct: 460 GDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Query: 487 SHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVV 546
+ + G +++ + +G + + ++++ ++ G + + +M+ D+V
Sbjct: 520 ASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVT 577
Query: 547 WKSLLASCKTHGNVDVGKRAAENILKIDPTN--SAALVLLCNIYASS 591
W ++ + +G G++A E ++ + ++V + IYA S
Sbjct: 578 WTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYACS 621
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 242/535 (45%), Gaps = 70/535 (13%)
Query: 89 ACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEM-PQRNVV 147
A SS +L R++H ++S +++ Y + VF + P +NV
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 148 SWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHV 207
W ++I S+NG A+E Y ++ +S + PD++TF S+I+AC+GL +G ++ +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 208 IKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVF 267
+ S L NAL+ MY++ + A VF + +D+ SW S+I G+S
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS--------- 183
Query: 268 NEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLY 327
S EA+ ++ E+ + ++PD TV S+L A + L +
Sbjct: 184 -------------------SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 328 QGMQIHSYIIK------------------------------------KGFYSNVPVCNAI 351
QG +H + +K N +C +
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 352 LQHQAGELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVF 411
E R+F L Q KPD +T + V+ AC + L + ++ Y++K G L+
Sbjct: 285 KLEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 412 VMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG 471
V N L+D+Y KCG + +AR++FN ME D VSW+S+I GY Q G EA+KLF+ M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 472 VRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEA 531
+ +H+T + +++ + + ++ G L+ + GI + ++D+ A+ G V ++
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHS-NGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 532 EDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILK--IDPTNSAALVLL 584
+ M D V W +++++C G+ G + + K + P + LV L
Sbjct: 463 LKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 295 bits (754), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 176/589 (29%), Positives = 296/589 (50%), Gaps = 70/589 (11%)
Query: 78 IRPSTY--ADLISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDAR 135
I P+ Y A + A SSL+S +GR+ H ++ D + ++ MY K G +ED
Sbjct: 114 ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL 173
Query: 136 MVFDEMPQRNVVSWTAMIAGCSQNGQENAAIE---LYVQMLQSGLMPDQFTFGSIIRACS 192
VF MP+RN +W+ M++G + G+ AI+ L+++ + G D + F +++ + +
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLA 232
Query: 193 GLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGS 252
VGLGRQ+H IK+ + NAL+ MY+K + + +A +F S ++ +W +
Sbjct: 233 ATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA 292
Query: 253 MIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLT 312
M+ G + + EA+ LFS M + P T
Sbjct: 293 MV----------------------------TGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 313 VRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVCNAILQHQAG--------------- 357
+ +L AC+ L +G Q+HS+++K GF ++ A++ A
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 358 ---------------------ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQ 396
E L+ M + P+ T V+ AC+++A+LE+G Q
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 397 LHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGC 456
+H + +K G L+V + + L MY KCGSL +F + DVVSW+++I G + G
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 457 GEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRS 516
G+EAL+LF M + G+ P+ VT V +++ACSH G VE G + +M ++ G+ P + +
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 517 CVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPT 576
C+VDLL+RAG++ EA++FI D + +W+ LL++CK HG ++G A E ++ +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 577 NSAALVLLCNIYASSGKWEEVARLMGSMKERGVRKVPGQSWIEIQTKIH 625
S+ V L IY + G+ +V R+ M+ GV K G SWIE++ + H
Sbjct: 625 ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYH 673
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 216/486 (44%), Gaps = 71/486 (14%)
Query: 50 LFSSLCKQNLYNEALVAFD-FLQNNTNFRIRPSTYADLISACSSLRSLQLGRKVHDHILS 108
+ S + EA+ F+ FL+ + ++S+ ++ + LGR++H +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 109 SKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAGCSQNGQENAAIEL 168
+ L N ++ MY KC SL +A +FD RN ++W+AM+ G SQNG+ A++L
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 169 YVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGSHLISQNALIAMYTK 228
+ +M +G+ P ++T ++ ACS +C + G+QLH+ ++K HL + AL+ MY K
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 229 FDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPNLASWNTIIAGVASC 288
+ DA F + +D+ A W ++I+G
Sbjct: 370 AGCLADARKGFDCLQERDV----------------------------ALWTSLISGYVQN 401
Query: 289 SNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHSYIIKKGFYSNVPVC 348
S+ EA+ L+ M +IP+ T+ S+L AC+S +L G Q+H + IK GF VP+
Sbjct: 402 SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG 461
Query: 349 NAI----------------------------------LQH--QAGELFRLFSLMLASQTK 372
+A+ L H Q E LF MLA +
Sbjct: 462 SALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGME 521
Query: 373 PDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNG--LMDMYVKCGSLGSAR 430
PD +TF +++ AC+ +E G + +M + LD V + ++D+ + G L A+
Sbjct: 522 PDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAK 580
Query: 431 ELFNFME-DPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPN--HVTLVGVLTACS 487
E D + W L+ G E + ++ + G R + +V L G+ TA
Sbjct: 581 EFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALG 640
Query: 488 HVGLVE 493
+ VE
Sbjct: 641 RMRDVE 646
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 201/429 (46%), Gaps = 78/429 (18%)
Query: 200 GRQLHAHVIKSEHGSHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSK 259
GR +H +I++ + + N L+ Y K ++ A ++F++I KD+ S
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVS---------- 82
Query: 260 LDFARTVFNEMESPNLASWNTIIAGVA---SCSNANEAMSLFSEMGDRELIPDGLTVRSL 316
WN++I G + S++ M LF EM ++++P+ T+ +
Sbjct: 83 ------------------WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGI 124
Query: 317 LCACTSPLSLYQGMQIHSYIIKKGFYSNVPV--------CNAILQHQAGELF-------- 360
A +S S G Q H+ ++K + ++ V C A L ++F
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 361 --------------------RLFSLMLASQ---TKPDHITFNDVMGACAAMASLEMGTQL 397
++F+L L + + D++ F V+ + AA + +G Q+
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQI 243
Query: 398 HCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCG 457
HC +K GL V + N L+ MY KC SL A ++F+ D + ++WS+++ GY+Q G
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 458 EEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSC 517
EA+KLF RM S+G++P+ T+VGVL ACS + +EEG QL+ + + G +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL-KLGFERHLFATTA 362
Query: 518 VVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVG-----KRAAENILK 572
+VD+ A+AG + +A + + + D+ +W SL++ + + + + I+
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 573 IDPTNSAAL 581
DPT ++ L
Sbjct: 422 NDPTMASVL 430
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 13/179 (7%)
Query: 390 SLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLIV 449
+L G +H I++TG + + N L++ Y KCG L A +FN + DVVSW+SLI
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 450 GYAQFG---CGEEALKLFRRMRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIM--QN 504
GY+Q G ++LFR MR+ + PN TL G+ A S + G Q + ++ +
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 505 EYGIIPTRERRSCVVDLLARAGRVHEAEDFINQMAF--DDDIVVWKSLLASCKTHGNVD 561
+G I + +V + +AG V ED + A+ + + W ++++ T G V+
Sbjct: 149 SFGDIYV---DTSLVGMYCKAGLV---EDGLKVFAYMPERNTYTWSTMVSGYATRGRVE 201
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 306/628 (48%), Gaps = 81/628 (12%)
Query: 42 FDDIWDFDLF------SSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADLISACSSLRS 95
FD I + D++ S + +E + F ++ T+ ++ AC R+
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RT 165
Query: 96 LQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIAG 155
+ G K+H L D + ++++Y + ++ +AR++FDEMP R++ SW AMI+G
Sbjct: 166 VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 225
Query: 156 CSQNGQENAAIELYVQMLQSGLMP-DQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHGS 214
Q+G A+ L +GL D T S++ AC+ G +H++ IK S
Sbjct: 226 YCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 215 HLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESPN 274
L N LI +Y +F R+ D + VF+ M +
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDC----------------------------QKVFDRMYVRD 312
Query: 275 LASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIHS 334
L SWN+II A+SLF EM + PD LT+ SL + + +
Sbjct: 313 LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 335 YIIKKG-FYSNVPVCNAIL------------------------------------QHQAG 357
+ ++KG F ++ + NA++ A
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 358 ELFRLFSLMLAS-QTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLALDVFVMNGL 416
E ++++M + + T+ V+ AC+ +L G +LH ++K GL LDVFV+ L
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSGVRPNH 476
DMY KCG L A LF + + V W++LI + G GE+A+ LF+ M GV+P+H
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 477 VTLVGVLTACSHVGLVEEGLQLYRIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDFIN 536
+T V +L+ACSH GLV+EG + +MQ +YGI P+ + C+VD+ RAG++ A FI
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 537 QMAFDDDIVVWKSLLASCKTHGNVDVGKRAAENILKIDPTNSAALVLLCNIYASSGKWEE 596
M+ D +W +LL++C+ HGNVD+GK A+E++ +++P + VLL N+YAS+GKWE
Sbjct: 613 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 672
Query: 597 VARLMGSMKERGVRKVPGQSWIEIQTKI 624
V + +G+RK PG S +E+ K+
Sbjct: 673 VDEIRSIAHGKGLRKTPGWSSMEVDNKV 700
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 234/505 (46%), Gaps = 78/505 (15%)
Query: 95 SLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNVVSWTAMIA 154
+LQ + +H ++ SK + + ++N+Y G++ AR FD + R+V +W MI+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 155 GCSQNGQENAAIELY-VQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAHVIKSEHG 213
G + G + I + + ML SGL PD TF S+++AC V G ++H +K
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 214 SHLISQNALIAMYTKFDRILDAWNVFSSIARKDITSWGSMIDGFSKLDFARTVFNEMESP 273
+ +LI +Y+++ + +A +F + +D+ SW +MI G+ +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ-------------- 228
Query: 274 NLASWNTIIAGVASCSNANEAMSLFSEMGDRELIPDGLTVRSLLCACTSPLSLYQGMQIH 333
NA EA++L + G R + D +TV SLL ACT +G+ IH
Sbjct: 229 --------------SGNAKEALTLSN--GLRAM--DSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 334 SYIIKKGFYSNVPVCNAI------------------------------------LQHQAG 357
SY IK G S + V N + L Q
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 358 ELFRLFSLMLASQTKPDHITFNDVMGACAAMASLEMGTQLHCYIMKTGLAL-DVFVMNGL 416
LF M S+ +PD +T + + + + + + ++ G L D+ + N +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 417 MDMYVKCGSLGSARELFNFMEDPDVVSWSSLIVGYAQFGCGEEALKLFRRMRSSG-VRPN 475
+ MY K G + SAR +FN++ + DV+SW+++I GYAQ G EA++++ M G + N
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 476 HVTLVGVLTACSHVGLVEEGLQLY-RIMQNEYGIIPTRERRSCVVDLLARAGRVHEAEDF 534
T V VL ACS G + +G++L+ R+++N G+ + + D+ + GR+ +A
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 535 INQMAFDDDIVVWKSLLASCKTHGN 559
Q+ + V W +L+A HG+
Sbjct: 509 FYQIPRVNS-VPWNTLIACHGFHGH 532
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 115/231 (49%), Gaps = 5/231 (2%)
Query: 27 LLDQAGEVVDSFLRRFDDIWDFDLFSSLCKQNLYNEALVAFDFLQNNTNFRIRPSTYADL 86
L+D A V + +L D I + S + +EA+ ++ ++ T+ +
Sbjct: 399 LVDSARAVFN-WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 87 ISACSSLRSLQLGRKVHDHILSSKCQPDAVLHNHILNMYGKCGSLEDARMVFDEMPQRNV 146
+ ACS +L+ G K+H +L + D + + +MYGKCG LEDA +F ++P+ N
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 147 VSWTAMIAGCSQNGQENAAIELYVQMLQSGLMPDQFTFGSIIRACSGLCCVGLGRQLHAH 206
V W +IA +G A+ L+ +ML G+ PD TF +++ ACS V G Q
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-QWCFE 576
Query: 207 VIKSEHG--SHLISQNALIAMYTKFDRILDAWNVFSSIA-RKDITSWGSMI 254
++++++G L ++ MY + ++ A S++ + D + WG+++
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 389 ASLEMGTQLHCYIMKTGLALDVFVMNGLMDMYVKCGSLGSARELFNFMEDPDVVSWSSLI 448
+L+ LH ++ + +V + L+++Y G++ AR F+ +++ DV +W+ +I
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 449 VGYAQFGCGEEALKLFRR-MRSSGVRPNHVTLVGVLTACSHVGLVEEGLQLYRIMQNEYG 507
GY + G E ++ F M SSG+ P++ T VL AC V +G +++ + ++G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIH-CLALKFG 180
Query: 508 IIPTRERRSCVVDLLARAGRVHEAEDFINQMAFDDDIVVWKSLLASCKTHGNVDVGKRAA 567
+ + ++ L +R V A ++M D+ W ++++ GN +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPV-RDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 568 ENILKIDPTNSAALVLLCN 586
+ +D +L+ C
Sbjct: 240 NGLRAMDSVTVVSLLSACT 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,383,721
Number of Sequences: 539616
Number of extensions: 9265115
Number of successful extensions: 35363
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 25891
Number of HSP's gapped (non-prelim): 2539
length of query: 634
length of database: 191,569,459
effective HSP length: 124
effective length of query: 510
effective length of database: 124,657,075
effective search space: 63575108250
effective search space used: 63575108250
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)