Query 036711
Match_columns 111
No_of_seqs 227 out of 1393
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:43:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036711.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036711hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 99.8 1.8E-20 4E-25 131.6 6.8 108 1-110 119-226 (492)
2 PF05577 Peptidase_S28: Serine 99.8 7.1E-18 1.5E-22 121.5 11.1 100 1-108 67-167 (434)
3 KOG2182 Hydrolytic enzymes of 99.6 2.5E-15 5.3E-20 107.9 7.9 100 1-108 126-226 (514)
4 KOG1455 Lysophospholipase [Lip 99.5 1.4E-13 3.1E-18 94.0 8.9 80 1-93 90-170 (313)
5 COG2267 PldB Lysophospholipase 99.5 1E-13 2.2E-18 96.0 8.1 75 1-88 69-144 (298)
6 PLN02298 hydrolase, alpha/beta 99.5 2E-13 4.3E-18 95.0 8.5 74 1-86 95-169 (330)
7 PLN02385 hydrolase; alpha/beta 99.5 4.8E-13 1E-17 93.9 9.2 74 1-86 123-197 (349)
8 PF00561 Abhydrolase_1: alpha/ 99.4 8.1E-13 1.7E-17 86.4 8.8 71 1-85 8-78 (230)
9 TIGR02240 PHA_depoly_arom poly 99.4 1.9E-13 4.1E-18 92.9 6.0 69 1-87 59-127 (276)
10 PHA02857 monoglyceride lipase; 99.4 7.1E-13 1.5E-17 89.9 8.6 74 1-87 60-133 (276)
11 PLN02824 hydrolase, alpha/beta 99.4 3.9E-13 8.5E-18 92.0 7.3 75 1-86 63-137 (294)
12 PRK03592 haloalkane dehalogena 99.4 5.5E-13 1.2E-17 91.3 7.3 69 1-87 61-129 (295)
13 PRK10749 lysophospholipase L2; 99.4 1.1E-12 2.3E-17 91.6 8.6 77 1-86 89-166 (330)
14 PLN02965 Probable pheophorbida 99.4 4.7E-13 1E-17 90.1 6.3 69 1-85 38-106 (255)
15 PF12697 Abhydrolase_6: Alpha/ 99.4 1.1E-12 2.3E-17 84.8 6.8 72 1-88 32-103 (228)
16 PRK00870 haloalkane dehalogena 99.4 1.1E-12 2.4E-17 90.3 7.0 69 1-85 81-149 (302)
17 KOG4409 Predicted hydrolase/ac 99.4 2.5E-12 5.5E-17 89.4 7.3 55 33-89 144-198 (365)
18 TIGR01607 PST-A Plasmodium sub 99.4 2.7E-12 5.9E-17 89.9 7.3 77 1-86 82-185 (332)
19 PRK10673 acyl-CoA esterase; Pr 99.3 2.5E-12 5.5E-17 85.9 6.2 65 1-84 50-114 (255)
20 PRK11126 2-succinyl-6-hydroxy- 99.3 5.9E-12 1.3E-16 83.6 6.8 67 1-86 35-102 (242)
21 TIGR03056 bchO_mg_che_rel puta 99.3 8E-12 1.7E-16 84.0 6.5 69 1-86 62-130 (278)
22 PRK07581 hypothetical protein; 99.3 9.5E-12 2.1E-16 86.9 6.8 54 31-86 105-159 (339)
23 KOG4178 Soluble epoxide hydrol 99.3 6.3E-12 1.4E-16 86.8 5.7 71 1-87 79-149 (322)
24 TIGR02427 protocat_pcaD 3-oxoa 99.3 3E-12 6.5E-17 84.0 4.0 68 1-86 47-114 (251)
25 TIGR03343 biphenyl_bphD 2-hydr 99.3 6E-12 1.3E-16 85.2 5.4 68 1-85 68-135 (282)
26 PLN02578 hydrolase 99.3 1.1E-11 2.4E-16 87.3 7.0 67 1-85 120-186 (354)
27 TIGR01250 pro_imino_pep_2 prol 99.3 1.4E-11 3.1E-16 82.5 7.0 70 1-85 61-130 (288)
28 PLN03087 BODYGUARD 1 domain co 99.3 1.2E-11 2.6E-16 90.4 6.9 71 1-88 240-311 (481)
29 TIGR03101 hydr2_PEP hydrolase, 99.3 3.2E-11 6.9E-16 82.3 8.6 72 1-87 64-135 (266)
30 PRK08775 homoserine O-acetyltr 99.3 9.7E-12 2.1E-16 87.2 5.5 67 1-86 107-173 (343)
31 TIGR01249 pro_imino_pep_1 prol 99.2 1.2E-11 2.5E-16 85.5 5.4 71 1-87 61-131 (306)
32 TIGR03611 RutD pyrimidine util 99.2 1.2E-11 2.6E-16 81.8 5.2 68 1-85 47-114 (257)
33 PLN02679 hydrolase, alpha/beta 99.2 2.3E-11 4.9E-16 86.0 6.8 69 1-86 122-191 (360)
34 PLN02894 hydrolase, alpha/beta 99.2 6.9E-11 1.5E-15 84.8 9.1 37 52-88 177-213 (402)
35 TIGR01392 homoserO_Ac_trn homo 99.2 2.7E-11 5.9E-16 85.2 6.4 54 27-86 108-162 (351)
36 TIGR03695 menH_SHCHC 2-succiny 99.2 4E-11 8.7E-16 78.4 6.7 70 1-85 35-104 (251)
37 PRK03204 haloalkane dehalogena 99.2 3.9E-11 8.5E-16 82.3 6.7 69 1-86 68-136 (286)
38 PRK06489 hypothetical protein; 99.2 5.9E-11 1.3E-15 83.8 7.7 75 1-85 113-188 (360)
39 PLN02211 methyl indole-3-aceta 99.2 4.2E-11 9.1E-16 81.8 6.5 70 1-86 53-122 (273)
40 PRK10349 carboxylesterase BioH 99.2 4.6E-11 1E-15 80.2 5.2 35 51-85 74-108 (256)
41 PLN02511 hydrolase 99.2 2E-10 4.3E-15 82.1 8.3 72 1-86 137-210 (388)
42 PLN02652 hydrolase; alpha/beta 99.2 3.1E-10 6.8E-15 81.3 9.1 71 1-86 171-245 (395)
43 TIGR01738 bioH putative pimelo 99.1 1.7E-10 3.6E-15 75.5 6.7 36 51-86 65-100 (245)
44 PLN03084 alpha/beta hydrolase 99.1 2.2E-10 4.8E-15 81.8 6.8 73 1-87 161-233 (383)
45 PRK10985 putative hydrolase; P 99.0 1.2E-09 2.7E-14 76.2 8.1 55 31-87 113-169 (324)
46 PRK14875 acetoin dehydrogenase 99.0 7.7E-10 1.7E-14 77.7 6.7 67 1-85 165-231 (371)
47 TIGR03100 hydr1_PEP hydrolase, 99.0 2.8E-09 6E-14 72.9 8.9 71 1-87 65-135 (274)
48 KOG2564 Predicted acetyltransf 99.0 6.4E-10 1.4E-14 75.8 4.8 67 1-82 110-178 (343)
49 TIGR01836 PHA_synth_III_C poly 99.0 2.2E-09 4.7E-14 75.6 7.5 59 28-88 114-173 (350)
50 PRK00175 metX homoserine O-ace 98.9 2.6E-09 5.6E-14 76.1 6.7 55 26-86 127-182 (379)
51 TIGR01840 esterase_phb esteras 98.9 6.4E-09 1.4E-13 68.5 8.1 57 31-87 75-131 (212)
52 PF05576 Peptidase_S37: PS-10 98.9 2.7E-10 5.9E-15 81.0 1.6 90 1-102 96-186 (448)
53 PRK06765 homoserine O-acetyltr 98.9 1.7E-09 3.6E-14 77.5 5.7 54 31-86 142-196 (389)
54 TIGR03230 lipo_lipase lipoprot 98.9 1.1E-08 2.4E-13 74.1 9.4 56 29-84 97-152 (442)
55 PRK13604 luxD acyl transferase 98.9 6.7E-09 1.4E-13 72.1 7.1 69 1-86 72-141 (307)
56 PLN02980 2-oxoglutarate decarb 98.9 4.2E-09 9E-14 86.3 7.0 75 1-85 1405-1479(1655)
57 PLN02733 phosphatidylcholine-s 98.9 1.2E-08 2.5E-13 74.1 8.2 59 29-89 142-204 (440)
58 KOG1454 Predicted hydrolase/ac 98.9 6.8E-09 1.5E-13 72.8 6.5 58 32-91 111-171 (326)
59 PF07819 PGAP1: PGAP1-like pro 98.9 2.4E-08 5.2E-13 66.8 8.8 73 34-106 65-145 (225)
60 PRK10566 esterase; Provisional 98.8 1.7E-08 3.6E-13 67.5 7.1 55 30-84 86-140 (249)
61 TIGR00976 /NonD putative hydro 98.8 1.5E-08 3.3E-13 75.3 7.0 72 1-86 61-132 (550)
62 PRK05077 frsA fermentation/res 98.8 3.7E-08 8E-13 71.1 8.0 51 37-87 251-301 (414)
63 cd00707 Pancreat_lipase_like P 98.8 3.4E-08 7.3E-13 67.8 6.9 54 32-85 93-146 (275)
64 PRK05855 short chain dehydroge 98.7 1.5E-08 3.2E-13 74.9 5.1 70 1-85 59-130 (582)
65 KOG1552 Predicted alpha/beta h 98.7 2.9E-08 6.2E-13 66.9 5.8 68 2-87 97-164 (258)
66 COG0596 MhpC Predicted hydrola 98.7 2.6E-08 5.7E-13 64.6 5.5 50 32-87 75-124 (282)
67 KOG2382 Predicted alpha/beta h 98.7 6.7E-08 1.4E-12 67.1 7.2 70 2-86 89-160 (315)
68 PF00326 Peptidase_S9: Prolyl 98.7 3.7E-08 8.1E-13 64.7 5.7 58 29-86 42-99 (213)
69 COG2021 MET2 Homoserine acetyl 98.7 4.3E-08 9.3E-13 69.0 6.1 57 30-88 127-184 (368)
70 COG1647 Esterase/lipase [Gener 98.7 1.6E-07 3.6E-12 62.2 7.5 66 22-92 59-124 (243)
71 PF10230 DUF2305: Uncharacteri 98.7 3.1E-07 6.8E-12 62.8 9.2 70 22-91 55-127 (266)
72 KOG2984 Predicted hydrolase [G 98.6 3.9E-09 8.5E-14 69.2 -0.5 75 2-91 80-154 (277)
73 PRK11460 putative hydrolase; P 98.6 3.7E-07 8E-12 61.1 7.7 53 33-85 85-137 (232)
74 TIGR02821 fghA_ester_D S-formy 98.5 4.7E-07 1E-11 62.0 7.0 41 46-86 133-173 (275)
75 PRK11071 esterase YqiA; Provis 98.5 7.7E-07 1.7E-11 58.0 6.8 50 33-87 45-94 (190)
76 PLN02442 S-formylglutathione h 98.5 9.8E-07 2.1E-11 60.7 7.4 53 32-86 126-178 (283)
77 PF06821 Ser_hydrolase: Serine 98.5 8.7E-07 1.9E-11 56.9 6.7 54 34-87 38-92 (171)
78 PF06028 DUF915: Alpha/beta hy 98.5 9.6E-07 2.1E-11 60.1 7.2 62 28-91 82-148 (255)
79 PF00756 Esterase: Putative es 98.4 6.1E-07 1.3E-11 60.1 5.6 49 37-85 101-149 (251)
80 PF12695 Abhydrolase_5: Alpha/ 98.4 1.6E-06 3.4E-11 53.1 7.0 49 34-84 45-93 (145)
81 PF10503 Esterase_phd: Esteras 98.4 1.4E-06 3.1E-11 58.1 6.9 56 32-87 78-133 (220)
82 TIGR01838 PHA_synth_I poly(R)- 98.4 2.1E-06 4.4E-11 63.9 7.7 53 33-87 246-303 (532)
83 PF02450 LCAT: Lecithin:choles 98.4 1.3E-06 2.9E-11 62.7 6.3 56 31-89 102-163 (389)
84 PF02230 Abhydrolase_2: Phosph 98.4 2.1E-06 4.6E-11 56.7 6.8 55 33-88 88-142 (216)
85 KOG4391 Predicted alpha/beta h 98.3 1.2E-07 2.5E-12 63.0 0.2 70 2-86 115-184 (300)
86 TIGR03502 lipase_Pla1_cef extr 98.3 2.1E-06 4.5E-11 66.2 6.9 47 27-73 521-577 (792)
87 COG3208 GrsT Predicted thioest 98.3 1E-06 2.2E-11 59.2 4.6 53 31-83 52-109 (244)
88 PF08538 DUF1749: Protein of u 98.3 1.5E-05 3.2E-10 55.4 9.6 70 22-92 77-153 (303)
89 cd00741 Lipase Lipase. Lipase 98.3 4.1E-06 9E-11 52.5 6.3 54 33-88 12-69 (153)
90 COG2819 Predicted hydrolase of 98.2 1.8E-06 3.8E-11 58.7 4.5 47 45-91 131-177 (264)
91 PLN02872 triacylglycerol lipas 98.2 1.3E-06 2.7E-11 62.9 3.7 57 27-87 138-198 (395)
92 KOG1553 Predicted alpha/beta h 98.2 1.1E-05 2.3E-10 57.1 7.4 49 34-83 294-342 (517)
93 PRK07868 acyl-CoA synthetase; 98.2 1.1E-05 2.4E-10 64.0 8.0 55 29-86 122-177 (994)
94 PF00975 Thioesterase: Thioest 98.1 2.2E-05 4.8E-10 51.8 7.9 36 51-86 66-104 (229)
95 COG3545 Predicted esterase of 98.1 1.2E-05 2.6E-10 51.6 6.2 41 50-90 58-98 (181)
96 PRK10439 enterobactin/ferric e 98.1 1.4E-05 3E-10 57.9 7.0 52 37-88 272-325 (411)
97 PF02129 Peptidase_S15: X-Pro 98.1 1.1E-05 2.4E-10 55.1 6.2 72 1-86 65-136 (272)
98 KOG1838 Alpha/beta hydrolase [ 98.1 2E-05 4.3E-10 56.7 7.6 73 1-87 162-236 (409)
99 PLN00021 chlorophyllase 98.1 1.7E-05 3.6E-10 55.6 6.4 34 51-84 126-164 (313)
100 PF06259 Abhydrolase_8: Alpha/ 98.0 3E-05 6.5E-10 50.2 6.8 61 29-90 88-148 (177)
101 PF01764 Lipase_3: Lipase (cla 98.0 1.8E-05 4E-10 48.5 5.6 37 33-71 48-84 (140)
102 COG0400 Predicted esterase [Ge 98.0 2.4E-05 5.1E-10 51.8 6.3 56 31-86 79-134 (207)
103 PF06342 DUF1057: Alpha/beta h 98.0 6.3E-05 1.4E-09 51.8 8.5 61 32-95 86-146 (297)
104 TIGR01839 PHA_synth_II poly(R) 98.0 3.2E-05 7E-10 57.8 7.3 63 24-88 263-330 (560)
105 PF08840 BAAT_C: BAAT / Acyl-C 98.0 3.2E-05 6.9E-10 51.3 6.3 56 34-90 5-60 (213)
106 cd00519 Lipase_3 Lipase (class 98.0 3.5E-05 7.5E-10 51.4 6.4 52 33-87 112-168 (229)
107 KOG4667 Predicted esterase [Li 98.0 2.7E-05 5.9E-10 51.8 5.6 71 2-88 71-141 (269)
108 PTZ00472 serine carboxypeptida 98.0 7.9E-05 1.7E-09 54.8 8.6 75 2-86 131-216 (462)
109 KOG3724 Negative regulator of 97.9 2.1E-05 4.5E-10 60.4 5.6 39 52-90 183-224 (973)
110 PF05728 UPF0227: Uncharacteri 97.9 5.7E-05 1.2E-09 49.3 6.7 51 33-88 43-93 (187)
111 PF05057 DUF676: Putative seri 97.9 4.5E-05 9.6E-10 50.7 6.2 42 51-92 78-131 (217)
112 COG0429 Predicted hydrolase of 97.9 5.5E-05 1.2E-09 53.1 6.8 53 32-86 131-185 (345)
113 PF05677 DUF818: Chlamydia CHL 97.9 4.2E-05 9.2E-10 53.9 6.0 57 2-73 180-237 (365)
114 PF01674 Lipase_2: Lipase (cla 97.9 5.6E-05 1.2E-09 50.5 6.0 40 30-72 57-96 (219)
115 PRK10162 acetyl esterase; Prov 97.8 5.9E-05 1.3E-09 52.8 5.9 57 30-86 130-195 (318)
116 PLN02454 triacylglycerol lipas 97.8 0.00017 3.6E-09 52.2 7.8 40 32-71 209-248 (414)
117 PF11187 DUF2974: Protein of u 97.8 0.00013 2.7E-09 49.0 6.8 53 34-89 70-126 (224)
118 COG4099 Predicted peptidase [G 97.8 6E-05 1.3E-09 52.4 4.9 53 33-85 250-303 (387)
119 PF00151 Lipase: Lipase; Inte 97.7 0.00014 3.1E-09 51.3 6.7 52 33-84 132-185 (331)
120 PF07859 Abhydrolase_3: alpha/ 97.7 4.4E-05 9.6E-10 49.8 3.9 59 28-86 45-110 (211)
121 COG2945 Predicted hydrolase of 97.7 0.0001 2.3E-09 48.1 5.4 56 29-87 82-138 (210)
122 PRK05371 x-prolyl-dipeptidyl a 97.7 0.00027 5.8E-09 55.0 8.3 71 2-85 288-372 (767)
123 COG4757 Predicted alpha/beta h 97.7 4.2E-05 9.1E-10 51.4 3.3 59 2-70 66-124 (281)
124 KOG2369 Lecithin:cholesterol a 97.7 4.5E-05 9.7E-10 55.6 3.3 58 29-88 162-227 (473)
125 PRK10115 protease 2; Provision 97.6 0.00017 3.6E-09 55.5 6.1 57 30-86 503-559 (686)
126 COG1506 DAP2 Dipeptidyl aminop 97.6 0.00012 2.7E-09 55.5 5.0 56 30-86 452-507 (620)
127 PF11144 DUF2920: Protein of u 97.6 0.00039 8.4E-09 50.1 7.0 57 32-88 163-221 (403)
128 PF03096 Ndr: Ndr family; Int 97.6 0.00031 6.6E-09 48.5 6.2 59 22-86 76-134 (283)
129 COG3319 Thioesterase domains o 97.6 0.00055 1.2E-08 46.8 7.4 38 50-87 64-104 (257)
130 PLN02517 phosphatidylcholine-s 97.6 0.00015 3.3E-09 54.5 4.9 57 30-88 194-265 (642)
131 KOG2931 Differentiation-relate 97.5 0.00066 1.4E-08 47.1 7.5 59 21-85 98-156 (326)
132 PLN02571 triacylglycerol lipas 97.5 0.00032 7E-09 50.8 6.2 39 33-71 208-246 (413)
133 COG1075 LipA Predicted acetylt 97.5 0.00033 7.3E-09 49.5 6.2 56 33-90 111-168 (336)
134 COG4814 Uncharacterized protei 97.5 0.00021 4.5E-09 48.6 4.6 53 33-87 120-177 (288)
135 PRK04940 hypothetical protein; 97.5 0.00058 1.3E-08 44.3 6.3 37 51-90 60-96 (180)
136 PLN02162 triacylglycerol lipas 97.5 0.00054 1.2E-08 50.2 6.7 52 35-88 264-323 (475)
137 PF06500 DUF1100: Alpha/beta h 97.5 0.00026 5.7E-09 51.2 4.9 52 37-88 247-298 (411)
138 COG0412 Dienelactone hydrolase 97.4 0.0005 1.1E-08 46.4 5.8 53 29-82 90-142 (236)
139 PLN00413 triacylglycerol lipas 97.4 0.00067 1.5E-08 49.8 6.7 51 35-87 270-328 (479)
140 PRK10252 entF enterobactin syn 97.4 0.00065 1.4E-08 55.0 7.2 53 27-84 1114-1169(1296)
141 PLN02324 triacylglycerol lipas 97.4 0.0011 2.5E-08 48.0 7.6 38 34-71 198-235 (415)
142 PF01738 DLH: Dienelactone hyd 97.4 0.00024 5.3E-09 46.8 4.0 54 30-84 77-130 (218)
143 smart00824 PKS_TE Thioesterase 97.3 0.0026 5.7E-08 40.7 8.3 36 50-85 63-101 (212)
144 PLN02408 phospholipase A1 97.3 0.00051 1.1E-08 49.1 5.2 38 34-71 183-220 (365)
145 COG3509 LpqC Poly(3-hydroxybut 97.3 0.0009 1.9E-08 46.5 6.1 57 30-86 123-179 (312)
146 PLN02310 triacylglycerol lipas 97.3 0.0014 3E-08 47.5 6.9 37 51-87 209-249 (405)
147 PF05448 AXE1: Acetyl xylan es 97.3 0.001 2.3E-08 46.8 6.1 59 29-88 153-211 (320)
148 PF03403 PAF-AH_p_II: Platelet 97.2 0.00057 1.2E-08 49.1 4.6 38 52-90 229-266 (379)
149 PF01083 Cutinase: Cutinase; 97.2 0.0015 3.2E-08 42.3 6.1 57 30-88 62-124 (179)
150 PF11288 DUF3089: Protein of u 97.2 0.0012 2.6E-08 43.7 5.6 42 30-72 75-116 (207)
151 PF12740 Chlorophyllase2: Chlo 97.2 0.0016 3.5E-08 44.5 6.1 58 29-86 61-131 (259)
152 KOG2281 Dipeptidyl aminopeptid 97.2 0.00072 1.6E-08 51.4 4.7 56 31-87 706-762 (867)
153 COG3571 Predicted hydrolase of 97.2 0.0014 3E-08 42.1 5.2 53 35-89 75-127 (213)
154 COG0627 Predicted esterase [Ge 97.2 0.00073 1.6E-08 47.5 4.4 38 52-89 153-190 (316)
155 PLN02606 palmitoyl-protein thi 97.2 0.0052 1.1E-07 43.0 8.4 59 52-110 96-158 (306)
156 PF05990 DUF900: Alpha/beta hy 97.2 0.0013 2.8E-08 44.3 5.4 53 30-84 74-135 (233)
157 PLN02802 triacylglycerol lipas 97.1 0.001 2.2E-08 49.3 5.1 38 34-71 313-350 (509)
158 PLN02761 lipase class 3 family 97.1 0.0019 4E-08 48.1 5.9 38 33-70 272-313 (527)
159 PLN02934 triacylglycerol lipas 97.1 0.0027 5.9E-08 47.1 6.7 34 35-70 307-340 (515)
160 PLN02753 triacylglycerol lipas 97.0 0.0023 5E-08 47.6 6.1 38 33-70 291-331 (531)
161 PF06057 VirJ: Bacterial virul 97.0 0.003 6.5E-08 41.3 6.0 56 28-85 47-106 (192)
162 PF02089 Palm_thioest: Palmito 97.0 0.017 3.7E-07 40.0 9.8 44 52-95 81-125 (279)
163 PF05277 DUF726: Protein of un 97.0 0.0014 2.9E-08 46.7 4.5 41 49-89 218-263 (345)
164 COG1770 PtrB Protease II [Amin 97.0 0.0015 3.1E-08 49.7 4.8 59 29-87 505-563 (682)
165 COG3243 PhaC Poly(3-hydroxyalk 97.0 0.002 4.3E-08 46.8 5.2 62 25-88 156-219 (445)
166 PLN03037 lipase class 3 family 96.9 0.0049 1.1E-07 45.9 6.9 21 51-71 318-338 (525)
167 COG4782 Uncharacterized protei 96.9 0.0026 5.7E-08 45.3 5.1 41 29-71 171-211 (377)
168 cd00312 Esterase_lipase Estera 96.8 0.0014 3E-08 48.2 3.7 57 31-87 153-214 (493)
169 PLN02719 triacylglycerol lipas 96.8 0.0041 8.8E-08 46.2 6.0 38 33-70 277-317 (518)
170 PF11339 DUF3141: Protein of u 96.8 0.009 2E-07 44.6 7.7 60 30-90 116-179 (581)
171 PF09752 DUF2048: Uncharacteri 96.8 0.0063 1.4E-07 43.3 6.6 48 30-80 157-204 (348)
172 COG2382 Fes Enterochelin ester 96.8 0.002 4.4E-08 44.8 4.0 55 37-91 161-217 (299)
173 PLN02633 palmitoyl protein thi 96.8 0.017 3.8E-07 40.5 8.6 44 52-95 95-140 (314)
174 PLN02847 triacylglycerol lipas 96.8 0.0032 6.9E-08 47.6 5.1 35 35-71 237-271 (633)
175 PF00135 COesterase: Carboxyle 96.8 0.0075 1.6E-07 44.4 7.1 59 30-88 184-247 (535)
176 KOG2100 Dipeptidyl aminopeptid 96.8 0.0036 7.7E-08 48.8 5.5 55 30-84 587-642 (755)
177 PF12715 Abhydrolase_7: Abhydr 96.7 0.0022 4.7E-08 46.1 3.8 49 34-83 209-257 (390)
178 TIGR01849 PHB_depoly_PhaZ poly 96.7 0.0073 1.6E-07 43.9 6.3 60 24-90 148-212 (406)
179 KOG2624 Triglyceride lipase-ch 96.5 0.0032 7E-08 45.7 3.7 58 30-89 142-202 (403)
180 COG0657 Aes Esterase/lipase [L 96.5 0.0089 1.9E-07 41.5 5.6 58 28-85 126-190 (312)
181 COG2936 Predicted acyl esteras 96.5 0.0071 1.5E-07 45.5 5.3 56 30-86 104-159 (563)
182 KOG4569 Predicted lipase [Lipi 96.5 0.007 1.5E-07 42.9 5.0 37 33-71 155-191 (336)
183 KOG3101 Esterase D [General fu 96.4 0.00021 4.6E-09 47.6 -2.8 37 47-83 137-173 (283)
184 PF07224 Chlorophyllase: Chlor 96.4 0.0087 1.9E-07 41.2 4.7 55 29-83 90-154 (307)
185 PF07519 Tannase: Tannase and 96.3 0.012 2.6E-07 43.7 5.5 55 32-86 95-150 (474)
186 KOG3975 Uncharacterized conser 96.3 0.026 5.6E-07 38.7 6.5 42 46-87 105-148 (301)
187 COG4947 Uncharacterized protei 96.2 0.0061 1.3E-07 39.5 3.3 35 52-86 102-136 (227)
188 PF00450 Peptidase_S10: Serine 96.2 0.043 9.4E-07 39.3 7.9 64 25-88 109-183 (415)
189 PF07082 DUF1350: Protein of u 96.1 0.023 5E-07 38.7 5.8 33 51-83 90-122 (250)
190 KOG4627 Kynurenine formamidase 96.1 0.0066 1.4E-07 40.5 3.1 58 27-85 113-171 (270)
191 KOG2029 Uncharacterized conser 96.1 0.023 5E-07 43.1 6.1 55 34-88 509-574 (697)
192 KOG4540 Putative lipase essent 96.1 0.01 2.3E-07 41.4 4.0 40 33-74 260-299 (425)
193 COG5153 CVT17 Putative lipase 96.1 0.01 2.3E-07 41.4 4.0 40 33-74 260-299 (425)
194 KOG3847 Phospholipase A2 (plat 96.0 0.0036 7.7E-08 44.1 1.5 39 52-91 242-280 (399)
195 KOG3967 Uncharacterized conser 95.9 0.031 6.8E-07 37.5 5.5 39 50-88 189-229 (297)
196 PF12048 DUF3530: Protein of u 95.6 0.084 1.8E-06 37.1 7.1 35 52-86 194-229 (310)
197 PF12146 Hydrolase_4: Putative 95.6 0.014 3E-07 32.8 2.5 27 1-39 51-78 (79)
198 KOG4840 Predicted hydrolases o 95.5 0.022 4.9E-07 38.5 3.8 64 22-88 80-145 (299)
199 KOG2565 Predicted hydrolases o 95.5 0.044 9.5E-07 39.6 5.3 46 33-80 213-258 (469)
200 PF03959 FSH1: Serine hydrolas 95.5 0.069 1.5E-06 35.3 6.0 36 53-88 104-147 (212)
201 PF08237 PE-PPE: PE-PPE domain 95.2 0.22 4.8E-06 33.5 7.7 40 49-88 46-91 (225)
202 PLN03016 sinapoylglucose-malat 95.0 0.13 2.9E-06 37.8 6.6 57 29-85 142-209 (433)
203 KOG2237 Predicted serine prote 94.9 0.023 5.1E-07 43.4 2.7 56 29-84 527-582 (712)
204 PLN02209 serine carboxypeptida 94.9 0.15 3.3E-06 37.5 6.7 59 28-86 143-212 (437)
205 PLN02213 sinapoylglucose-malat 94.5 0.27 5.9E-06 34.6 7.2 60 27-86 26-96 (319)
206 COG2272 PnbA Carboxylesterase 94.5 0.04 8.7E-07 40.9 2.9 57 30-87 156-218 (491)
207 KOG2541 Palmitoyl protein thio 94.3 0.51 1.1E-05 32.8 7.7 53 52-104 93-148 (296)
208 KOG2112 Lysophospholipase [Lip 94.2 0.2 4.4E-06 33.2 5.6 37 49-85 91-127 (206)
209 PF03583 LIP: Secretory lipase 94.2 0.26 5.6E-06 34.3 6.4 57 29-85 45-112 (290)
210 PF04301 DUF452: Protein of un 93.8 0.28 6E-06 32.8 5.6 39 52-92 58-96 (213)
211 KOG1515 Arylacetamide deacetyl 93.6 0.59 1.3E-05 33.4 7.4 58 31-88 142-209 (336)
212 PF10340 DUF2424: Protein of u 93.6 0.31 6.6E-06 35.3 5.9 59 29-89 175-238 (374)
213 COG3458 Acetyl esterase (deace 93.2 0.067 1.4E-06 37.2 2.0 56 30-86 155-210 (321)
214 KOG1516 Carboxylesterase and r 93.2 0.2 4.4E-06 37.5 4.7 56 33-88 174-234 (545)
215 COG4188 Predicted dienelactone 92.8 0.16 3.4E-06 36.6 3.5 46 29-74 130-182 (365)
216 COG3150 Predicted esterase [Ge 92.5 0.47 1E-05 30.8 5.0 51 33-88 43-93 (191)
217 KOG3253 Predicted alpha/beta h 90.9 0.39 8.5E-06 37.0 3.9 65 27-91 224-291 (784)
218 COG2939 Carboxypeptidase C (ca 90.2 0.59 1.3E-05 35.0 4.3 63 28-90 172-240 (498)
219 KOG2385 Uncharacterized conser 89.9 0.86 1.9E-05 34.5 4.9 43 50-92 446-493 (633)
220 KOG1283 Serine carboxypeptidas 88.8 1.1 2.5E-05 32.0 4.6 72 29-100 99-180 (414)
221 KOG3043 Predicted hydrolase re 87.9 0.2 4.3E-06 33.8 0.5 50 29-81 100-149 (242)
222 TIGR03712 acc_sec_asp2 accesso 87.9 0.62 1.3E-05 34.9 3.0 47 28-74 334-380 (511)
223 KOG1551 Uncharacterized conser 87.5 1.3 2.8E-05 31.0 4.2 28 52-79 196-223 (371)
224 COG3946 VirJ Type IV secretory 87.1 1.9 4E-05 31.8 4.9 46 27-74 304-349 (456)
225 PF03283 PAE: Pectinacetyleste 87.1 8.7 0.00019 27.8 8.4 54 33-87 138-196 (361)
226 KOG1282 Serine carboxypeptidas 85.3 7.7 0.00017 29.0 7.5 61 26-86 142-213 (454)
227 PF11713 Peptidase_C80: Peptid 84.6 1.6 3.5E-05 27.7 3.4 42 22-63 73-116 (157)
228 COG1505 Serine proteases of th 83.1 0.18 4E-06 38.4 -1.6 57 29-86 478-534 (648)
229 KOG1202 Animal-type fatty acid 82.4 8.5 0.00018 32.8 7.1 55 30-86 2162-2220(2376)
230 PF05705 DUF829: Eukaryotic pr 82.0 8.5 0.00018 25.6 6.3 38 52-89 68-115 (240)
231 PF09994 DUF2235: Uncharacteri 81.6 3.5 7.6E-05 28.5 4.4 39 33-72 75-113 (277)
232 PF10081 Abhydrolase_9: Alpha/ 76.6 3.4 7.3E-05 29.0 3.0 54 35-88 89-149 (289)
233 cd07212 Pat_PNPLA9 Patatin-lik 76.1 6.8 0.00015 27.6 4.5 21 53-73 34-54 (312)
234 smart00827 PKS_AT Acyl transfe 71.0 8.4 0.00018 26.4 4.0 18 52-69 83-100 (298)
235 TIGR00128 fabD malonyl CoA-acy 70.7 7.8 0.00017 26.4 3.7 18 52-69 84-101 (290)
236 TIGR03131 malonate_mdcH malona 70.3 12 0.00025 25.8 4.5 19 51-69 76-94 (295)
237 PF00698 Acyl_transf_1: Acyl t 69.6 4.5 9.7E-05 28.3 2.4 18 52-69 85-102 (318)
238 COG2230 Cfa Cyclopropane fatty 68.4 32 0.0007 24.1 6.3 45 37-82 59-104 (283)
239 TIGR02816 pfaB_fam PfaB family 68.0 10 0.00022 29.1 4.0 25 45-71 261-285 (538)
240 COG3673 Uncharacterized conser 67.9 19 0.00041 26.1 5.1 37 33-70 105-141 (423)
241 PF09949 DUF2183: Uncharacteri 65.6 25 0.00054 20.6 5.3 43 37-81 53-97 (100)
242 cd07225 Pat_PNPLA6_PNPLA7 Pata 64.8 7.2 0.00016 27.5 2.6 22 52-73 44-65 (306)
243 PF02273 Acyl_transf_2: Acyl t 64.4 37 0.00081 23.7 5.8 58 23-85 76-133 (294)
244 COG3887 Predicted signaling pr 63.4 39 0.00084 26.5 6.3 47 32-83 323-375 (655)
245 cd07207 Pat_ExoU_VipD_like Exo 63.2 8.1 0.00018 24.7 2.5 22 52-73 28-49 (194)
246 PF14253 AbiH: Bacteriophage a 62.8 3.6 7.8E-05 27.9 0.8 18 51-68 235-252 (270)
247 PF08484 Methyltransf_14: C-me 62.3 25 0.00053 22.4 4.5 32 50-81 68-99 (160)
248 cd07198 Patatin Patatin-like p 61.1 10 0.00022 24.0 2.6 23 52-74 27-49 (172)
249 cd07209 Pat_hypo_Ecoli_Z1214_l 60.2 9.8 0.00021 25.2 2.5 22 52-73 27-48 (215)
250 PF12242 Eno-Rase_NADH_b: NAD( 59.0 30 0.00066 19.4 4.5 45 35-79 23-68 (78)
251 KOG4372 Predicted alpha/beta h 58.8 2.7 5.8E-05 30.8 -0.4 18 52-69 151-168 (405)
252 cd07227 Pat_Fungal_NTE1 Fungal 58.1 11 0.00024 26.1 2.6 21 52-72 39-59 (269)
253 cd07210 Pat_hypo_W_succinogene 57.9 24 0.00051 23.6 4.1 22 52-73 29-50 (221)
254 COG2607 Predicted ATPase (AAA+ 57.7 7.2 0.00016 27.0 1.5 50 2-56 94-144 (287)
255 cd07208 Pat_hypo_Ecoli_yjju_li 56.9 13 0.00029 25.2 2.8 22 53-74 29-50 (266)
256 PRK13690 hypothetical protein; 56.6 38 0.00083 22.2 4.6 32 30-61 5-36 (184)
257 PRK10279 hypothetical protein; 56.2 25 0.00054 24.8 4.1 23 52-74 34-56 (300)
258 cd07228 Pat_NTE_like_bacteria 55.4 11 0.00024 23.9 2.1 23 52-74 29-51 (175)
259 COG2830 Uncharacterized protei 54.4 23 0.0005 23.1 3.3 23 52-74 58-80 (214)
260 COG1752 RssA Predicted esteras 53.2 28 0.0006 24.3 4.0 23 52-74 40-62 (306)
261 cd07217 Pat17_PNPLA8_PNPLA9_li 52.5 15 0.00032 26.4 2.5 18 54-71 44-61 (344)
262 cd07218 Pat_iPLA2 Calcium-inde 51.7 41 0.00088 22.9 4.5 20 54-73 33-52 (245)
263 COG0331 FabD (acyl-carrier-pro 50.9 29 0.00064 24.6 3.8 21 50-70 84-104 (310)
264 TIGR03607 patatin-related prot 50.7 37 0.0008 27.2 4.5 19 52-70 67-85 (739)
265 PF01494 FAD_binding_3: FAD bi 50.4 31 0.00066 23.7 3.8 24 52-75 3-26 (356)
266 COG3675 Predicted lipase [Lipi 50.2 12 0.00026 26.6 1.7 57 38-98 163-223 (332)
267 PLN02752 [acyl-carrier protein 48.3 18 0.00038 25.7 2.4 17 53-69 126-142 (343)
268 cd07230 Pat_TGL4-5_like Triacy 48.3 11 0.00025 27.8 1.5 25 52-76 102-126 (421)
269 cd07229 Pat_TGL3_like Triacylg 48.0 21 0.00045 26.3 2.7 27 52-78 112-138 (391)
270 cd07205 Pat_PNPLA6_PNPLA7_NTE1 47.7 22 0.00048 22.4 2.6 22 52-73 29-50 (175)
271 PRK02399 hypothetical protein; 47.6 98 0.0021 23.1 6.0 31 52-82 98-128 (406)
272 PF04260 DUF436: Protein of un 46.8 38 0.00082 22.0 3.4 28 34-61 2-29 (172)
273 PF01734 Patatin: Patatin-like 46.5 19 0.0004 22.3 2.1 20 52-71 28-47 (204)
274 PRK13512 coenzyme A disulfide 45.2 36 0.00077 25.0 3.6 30 52-81 3-32 (438)
275 cd07211 Pat_PNPLA8 Patatin-lik 44.6 21 0.00046 24.9 2.3 17 54-70 44-60 (308)
276 cd07232 Pat_PLPL Patain-like p 43.9 23 0.0005 26.1 2.4 26 52-77 96-121 (407)
277 cd07213 Pat17_PNPLA8_PNPLA9_li 42.6 25 0.00054 24.4 2.4 21 53-73 36-56 (288)
278 cd07204 Pat_PNPLA_like Patatin 41.5 32 0.0007 23.3 2.8 20 54-73 34-53 (243)
279 KOG2214 Predicted esterase of 41.3 5.9 0.00013 30.0 -0.9 29 52-80 203-231 (543)
280 PF06792 UPF0261: Uncharacteri 40.8 1.3E+02 0.0027 22.5 5.7 31 52-82 96-126 (403)
281 TIGR01440 conserved hypothetic 40.7 50 0.0011 21.4 3.3 27 35-61 3-29 (172)
282 PF10529 Hist_rich_Ca-bd: Hist 40.3 15 0.00033 13.9 0.6 8 1-8 3-10 (15)
283 cd07224 Pat_like Patatin-like 39.5 77 0.0017 21.3 4.3 22 53-74 31-52 (233)
284 PHA02595 tk.4 hypothetical pro 39.0 20 0.00044 22.5 1.4 17 58-74 29-45 (154)
285 COG5418 Predicted secreted pro 39.0 82 0.0018 20.1 4.0 35 23-57 70-104 (164)
286 PRK04965 NADH:flavorubredoxin 39.0 68 0.0015 22.9 4.2 30 52-81 4-33 (377)
287 PF00091 Tubulin: Tubulin/FtsZ 38.7 1.1E+02 0.0023 20.2 4.9 16 50-65 123-138 (216)
288 KOG4389 Acetylcholinesterase/B 38.5 58 0.0013 25.1 3.8 57 34-91 198-260 (601)
289 KOG2308 Phosphatidic acid-pref 38.5 20 0.00043 28.6 1.5 23 50-72 416-438 (741)
290 PRK09754 phenylpropionate diox 38.2 79 0.0017 22.8 4.5 31 51-81 4-34 (396)
291 PF07992 Pyr_redox_2: Pyridine 38.1 62 0.0013 20.4 3.6 22 52-73 1-22 (201)
292 cd07206 Pat_TGL3-4-5_SDP1 Tria 37.6 28 0.00061 24.6 2.0 21 52-72 98-118 (298)
293 PRK14046 malate--CoA ligase su 37.5 26 0.00057 25.6 1.9 32 50-81 118-149 (392)
294 KOG2551 Phospholipase/carboxyh 36.9 64 0.0014 22.0 3.5 33 54-86 107-147 (230)
295 cd07222 Pat_PNPLA4 Patatin-lik 36.1 42 0.00091 22.8 2.6 21 53-74 33-53 (246)
296 PF10561 UPF0565: Uncharacteri 36.0 36 0.00078 24.2 2.3 22 50-71 192-213 (303)
297 COG4822 CbiK Cobalamin biosynt 34.8 62 0.0014 22.1 3.2 28 32-59 117-146 (265)
298 PRK09564 coenzyme A disulfide 34.6 84 0.0018 22.9 4.2 31 52-82 2-32 (444)
299 cd07231 Pat_SDP1-like Sugar-De 34.2 26 0.00056 25.1 1.4 23 52-74 97-119 (323)
300 PRK06475 salicylate hydroxylas 33.8 85 0.0018 22.6 4.0 23 51-73 3-25 (400)
301 PRK13938 phosphoheptose isomer 33.7 1.4E+02 0.003 19.6 5.3 24 50-73 45-68 (196)
302 cd02189 delta_tubulin The tubu 33.4 84 0.0018 23.5 4.0 39 24-64 100-139 (446)
303 cd07216 Pat17_PNPLA8_PNPLA9_li 32.7 35 0.00076 23.9 1.9 17 54-70 45-61 (309)
304 cd07221 Pat_PNPLA3 Patatin-lik 31.4 60 0.0013 22.2 2.8 21 53-73 34-54 (252)
305 cd07199 Pat17_PNPLA8_PNPLA9_li 31.4 46 0.001 22.5 2.3 18 54-71 37-54 (258)
306 PF07812 TfuA: TfuA-like prote 31.3 83 0.0018 19.2 3.1 18 53-70 24-41 (120)
307 PF05673 DUF815: Protein of un 30.7 23 0.0005 24.4 0.7 42 2-44 61-103 (249)
308 TIGR03169 Nterm_to_SelD pyridi 30.5 88 0.0019 22.1 3.6 21 52-72 1-21 (364)
309 cd02188 gamma_tubulin Gamma-tu 30.3 2.2E+02 0.0047 21.3 5.7 26 50-75 129-162 (431)
310 cd01714 ETF_beta The electron 30.3 1.2E+02 0.0027 19.8 4.1 38 33-73 94-135 (202)
311 TIGR03219 salicylate_mono sali 30.2 93 0.002 22.5 3.8 22 52-73 2-23 (414)
312 cd07220 Pat_PNPLA2 Patatin-lik 30.2 59 0.0013 22.3 2.6 22 53-74 38-59 (249)
313 PRK08163 salicylate hydroxylas 30.2 1.1E+02 0.0023 21.9 4.0 23 51-73 5-27 (396)
314 PF02353 CMAS: Mycolic acid cy 30.1 75 0.0016 22.0 3.1 44 37-81 49-93 (273)
315 KOG2248 3'-5' exonuclease [Rep 30.0 44 0.00096 24.5 2.0 30 52-83 294-324 (380)
316 COG4475 Uncharacterized protei 28.9 1.4E+02 0.0029 19.3 3.8 30 32-61 5-34 (180)
317 cd07215 Pat17_PNPLA8_PNPLA9_li 28.2 51 0.0011 23.3 2.1 17 54-70 43-59 (329)
318 cd07214 Pat17_isozyme_like Pat 27.5 54 0.0012 23.6 2.1 19 53-71 45-63 (349)
319 cd01819 Patatin_and_cPLA2 Pata 27.0 80 0.0017 19.6 2.6 18 52-69 29-46 (155)
320 PF06180 CbiK: Cobalt chelatas 26.7 50 0.0011 22.9 1.8 30 30-59 119-150 (262)
321 PRK01021 lpxB lipid-A-disaccha 26.7 1E+02 0.0022 24.3 3.5 18 50-67 193-210 (608)
322 PTZ00387 epsilon tubulin; Prov 26.6 1.3E+02 0.0028 22.7 4.0 33 30-64 112-144 (465)
323 cd03331 Macro_Poa1p_like_SNF2 26.1 43 0.00092 21.2 1.3 17 58-74 30-47 (152)
324 PRK12467 peptide synthase; Pro 26.0 1.2E+02 0.0027 29.2 4.4 21 51-71 3757-3777(3956)
325 PRK01710 murD UDP-N-acetylmura 25.9 1.3E+02 0.0029 22.3 4.0 36 34-75 4-39 (458)
326 PRK11789 N-acetyl-anhydromuran 25.9 86 0.0019 20.5 2.7 30 29-60 129-158 (185)
327 PF00862 Sucrose_synth: Sucros 25.8 3E+02 0.0066 21.4 5.7 44 28-73 379-424 (550)
328 cd06143 PAN2_exo DEDDh 3'-5' e 25.6 57 0.0012 21.2 1.8 13 52-64 102-114 (174)
329 PRK06847 hypothetical protein; 25.4 1.5E+02 0.0032 20.9 4.1 22 52-73 6-27 (375)
330 KOG4388 Hormone-sensitive lipa 25.3 94 0.002 24.7 3.1 41 46-86 464-508 (880)
331 PF10142 PhoPQ_related: PhoPQ- 24.7 2.9E+02 0.0062 20.3 5.8 33 50-83 171-203 (367)
332 PF01972 SDH_sah: Serine dehyd 24.6 2.6E+02 0.0057 19.8 5.2 48 31-80 73-125 (285)
333 PF11009 DUF2847: Protein of u 24.6 1.4E+02 0.003 17.7 3.2 35 32-72 7-41 (105)
334 COG5023 Tubulin [Cytoskeleton] 23.6 77 0.0017 23.5 2.3 52 24-77 104-164 (443)
335 PRK14194 bifunctional 5,10-met 23.4 1.1E+02 0.0024 21.7 3.0 37 33-71 144-182 (301)
336 PRK07236 hypothetical protein; 23.2 1.7E+02 0.0037 20.9 4.0 30 51-82 7-36 (386)
337 PRK07588 hypothetical protein; 23.1 1.6E+02 0.0034 21.0 3.9 22 52-73 2-23 (391)
338 PF01872 RibD_C: RibD C-termin 23.1 2.1E+02 0.0047 18.3 5.4 40 34-81 122-161 (200)
339 TIGR02733 desat_CrtD C-3',4' d 22.4 1.8E+02 0.0039 21.6 4.1 24 52-75 3-26 (492)
340 cd01090 Creatinase Creatine am 22.3 84 0.0018 20.9 2.2 29 33-61 136-164 (228)
341 COG3621 Patatin [General funct 22.0 70 0.0015 23.3 1.8 21 54-74 45-65 (394)
342 TIGR03127 RuMP_HxlB 6-phospho 21.8 2.2E+02 0.0047 17.9 4.5 34 34-72 19-52 (179)
343 cd00382 beta_CA Carbonic anhyd 21.5 1.4E+02 0.003 17.8 2.9 30 34-65 44-73 (119)
344 PRK14989 nitrite reductase sub 21.4 2.4E+02 0.0052 23.1 4.8 35 52-86 5-41 (847)
345 COG2201 CheB Chemotaxis respon 21.2 2.7E+02 0.0059 20.3 4.6 29 50-78 156-185 (350)
346 COG4425 Predicted membrane pro 21.0 1.4E+02 0.003 23.0 3.2 37 51-88 397-437 (588)
347 TIGR01988 Ubi-OHases Ubiquinon 21.0 1.8E+02 0.0038 20.5 3.7 31 53-85 2-32 (385)
348 TIGR02813 omega_3_PfaA polyket 20.6 1.8E+02 0.0039 27.2 4.2 18 52-69 675-692 (2582)
349 PF12831 FAD_oxidored: FAD dep 20.6 2.1E+02 0.0046 21.0 4.2 22 53-74 2-23 (428)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=99.82 E-value=1.8e-20 Score=131.57 Aligned_cols=108 Identities=60% Similarity=1.142 Sum_probs=101.0
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
||.||+|.|+++. +.+.....+|++.++.++|.++++..++.++.....|++.+|.|+|||+++++..+||+.+.|.+
T Consensus 119 HRyYGeS~PFG~~--s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAl 196 (492)
T KOG2183|consen 119 HRYYGESLPFGSQ--SYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGAL 196 (492)
T ss_pred hhccccCCCCcch--hccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhh
Confidence 8999999999876 45677789999999999999999999999877777899999999999999999999999999999
Q ss_pred EecCcccccccCCCchhhHHHHHHHHhhhh
Q 036711 81 ASSAPILYFDDITPQNGYYSIVTRDFRVIY 110 (111)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (111)
+.++|+...++..|...|++.++++|+.++
T Consensus 197 AaSAPvl~f~d~vp~~~f~~ivT~~F~~as 226 (492)
T KOG2183|consen 197 AASAPVLYFEDTVPKDVFYRIVTRDFKDAS 226 (492)
T ss_pred hccCceEeecCCCCcchhhhHHHHHHHhhc
Confidence 999999999999999999999999999875
No 2
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=99.76 E-value=7.1e-18 Score=121.48 Aligned_cols=100 Identities=54% Similarity=0.907 Sum_probs=79.6
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhc-CCCCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFN-ARHSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
||+||+|.|++++. .+++++++.++.++|++.++++++.++. ..+.||+++|.|+||++++++..+||+.+.+.
T Consensus 67 HRyYG~S~P~~~~s-----~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga 141 (434)
T PF05577_consen 67 HRYYGKSQPFGDLS-----TENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGA 141 (434)
T ss_dssp -TTSTTB-TTGGGG-----GSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEE
T ss_pred hhhhcCCCCccccc-----hhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEE
Confidence 99999999998874 4589999999999999999999997763 35569999999999999999999999999999
Q ss_pred EEecCcccccccCCCchhhHHHHHHHHhh
Q 036711 80 LASSAPILYFDDITPQNGYYSIVTRDFRV 108 (111)
Q Consensus 80 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (111)
+.+|+|+....+. .+|.+.+.+.+..
T Consensus 142 ~ASSapv~a~~df---~~y~~~v~~~~~~ 167 (434)
T PF05577_consen 142 WASSAPVQAKVDF---WEYFEVVTESLRK 167 (434)
T ss_dssp EEET--CCHCCTT---THHHHHHHHHHHC
T ss_pred Eeccceeeeeccc---HHHHHHHHHHHHh
Confidence 9999999986554 5888888877643
No 3
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=99.61 E-value=2.5e-15 Score=107.92 Aligned_cols=100 Identities=44% Similarity=0.751 Sum_probs=88.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCC-CCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARH-SPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
||+||+|.|.+++ ..++..+++..+.+.|++++++.+..+.+..+ .||+.+|.|+-|.+++++..+||+.+.|.
T Consensus 126 HRFYG~S~P~~~~-----st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~Gs 200 (514)
T KOG2182|consen 126 HRFYGQSSPIGDL-----STSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGS 200 (514)
T ss_pred eeccccCCCCCCC-----cccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheee
Confidence 9999999998887 34578999999999999999999998886543 49999999999999999999999999999
Q ss_pred EEecCcccccccCCCchhhHHHHHHHHhh
Q 036711 80 LASSAPILYFDDITPQNGYYSIVTRDFRV 108 (111)
Q Consensus 80 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (111)
|.+++|+...-+ +++|..++++.++.
T Consensus 201 vASSapv~A~~D---F~EY~~VVe~s~~~ 226 (514)
T KOG2182|consen 201 VASSAPVLAKVD---FYEYLMVVEESLRR 226 (514)
T ss_pred cccccceeEEec---HHHHHHHHHHHHHh
Confidence 999999998544 57999998888763
No 4
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.51 E-value=1.4e-13 Score=94.00 Aligned_cols=80 Identities=26% Similarity=0.288 Sum_probs=65.7
Q ss_pred CCcccCCCCCCchhhhhcccccccccc-hhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFN-SAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
|+|||+|+. -.+|.. ....++|+..+.+.++.+-...+.|.+++||||||.|++.++.+.|+.++|+
T Consensus 90 ~~GhG~SdG------------l~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ 157 (313)
T KOG1455|consen 90 YEGHGRSDG------------LHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGA 157 (313)
T ss_pred ccCCCcCCC------------CcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccc
Confidence 689999984 334443 4567799999999888776666789999999999999999999999999999
Q ss_pred EEecCcccccccCC
Q 036711 80 LASSAPILYFDDIT 93 (111)
Q Consensus 80 i~~~~~~~~~~~~~ 93 (111)
|+++ |++...+..
T Consensus 158 ilva-Pmc~i~~~~ 170 (313)
T KOG1455|consen 158 ILVA-PMCKISEDT 170 (313)
T ss_pred eeee-cccccCCcc
Confidence 9877 666666554
No 5
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.50 E-value=1e-13 Score=95.95 Aligned_cols=75 Identities=28% Similarity=0.338 Sum_probs=59.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccc-hhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFN-SAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
|||||+|.. ...++.. ....++|+.++++.+....+ ..|++++||||||.|++.++.+++..++++
T Consensus 69 ~RGhG~S~r-----------~~rg~~~~f~~~~~dl~~~~~~~~~~~~--~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~ 135 (298)
T COG2267 69 LRGHGRSPR-----------GQRGHVDSFADYVDDLDAFVETIAEPDP--GLPVFLLGHSMGGLIALLYLARYPPRIDGL 135 (298)
T ss_pred CCCCCCCCC-----------CCcCCchhHHHHHHHHHHHHHHHhccCC--CCCeEEEEeCcHHHHHHHHHHhCCccccEE
Confidence 799999962 1334444 45677888888888776432 459999999999999999999999999999
Q ss_pred EEecCcccc
Q 036711 80 LASSAPILY 88 (111)
Q Consensus 80 i~~~~~~~~ 88 (111)
|+++|.+..
T Consensus 136 vLssP~~~l 144 (298)
T COG2267 136 VLSSPALGL 144 (298)
T ss_pred EEECccccC
Confidence 998855443
No 6
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.48 E-value=2e-13 Score=95.01 Aligned_cols=74 Identities=20% Similarity=0.176 Sum_probs=58.4
Q ss_pred CCcccCCCCCCchhhhhccccccc-ccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLG-YFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
+||||.|.. ..+ ..+.+..++|+.++++.+.......+.|++|+||||||++++.++.++|+.++++
T Consensus 95 ~rGhG~S~~------------~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~l 162 (330)
T PLN02298 95 LEGHGRSEG------------LRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGA 162 (330)
T ss_pred CCCCCCCCC------------ccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeE
Confidence 699999963 111 2345677899999999887643223458999999999999999999999999999
Q ss_pred EEecCcc
Q 036711 80 LASSAPI 86 (111)
Q Consensus 80 i~~~~~~ 86 (111)
|++++..
T Consensus 163 vl~~~~~ 169 (330)
T PLN02298 163 VLVAPMC 169 (330)
T ss_pred EEecccc
Confidence 9988654
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.46 E-value=4.8e-13 Score=93.94 Aligned_cols=74 Identities=28% Similarity=0.258 Sum_probs=57.0
Q ss_pred CCcccCCCCCCchhhhhcccccccc-cchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGY-FNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
+||||+|.. ..++ .+....++|+.++++.+..+......+++|+||||||++++.++.++|+.++++
T Consensus 123 ~~G~G~S~~------------~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~gl 190 (349)
T PLN02385 123 YPGFGLSEG------------LHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGA 190 (349)
T ss_pred CCCCCCCCC------------CCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhhe
Confidence 589999973 1122 345677888888888776532223448999999999999999999999999999
Q ss_pred EEecCcc
Q 036711 80 LASSAPI 86 (111)
Q Consensus 80 i~~~~~~ 86 (111)
|++++..
T Consensus 191 VLi~p~~ 197 (349)
T PLN02385 191 ILVAPMC 197 (349)
T ss_pred eEecccc
Confidence 9998543
No 8
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.45 E-value=8.1e-13 Score=86.37 Aligned_cols=71 Identities=27% Similarity=0.377 Sum_probs=53.1
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||+|.|+|.. ..... ....+|+.+.++.+.+.++.+ +++++||||||.+++.++.++|+.++++|
T Consensus 8 ~rG~g~S~~~~--------~~~~~----~~~~~~~~~~~~~~~~~l~~~--~~~~vG~S~Gg~~~~~~a~~~p~~v~~lv 73 (230)
T PF00561_consen 8 LRGFGYSSPHW--------DPDFP----DYTTDDLAADLEALREALGIK--KINLVGHSMGGMLALEYAAQYPERVKKLV 73 (230)
T ss_dssp CTTSTTSSSCC--------GSGSC----THCHHHHHHHHHHHHHHHTTS--SEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred CCCCCCCCCCc--------cCCcc----cccHHHHHHHHHHHHHHhCCC--CeEEEEECCChHHHHHHHHHCchhhcCcE
Confidence 58999998510 01222 233456666666666666544 69999999999999999999999999999
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
+++++
T Consensus 74 l~~~~ 78 (230)
T PF00561_consen 74 LISPP 78 (230)
T ss_dssp EESES
T ss_pred EEeee
Confidence 99876
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.45 E-value=1.9e-13 Score=92.89 Aligned_cols=69 Identities=23% Similarity=0.221 Sum_probs=53.2
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||+|.. ....++.+...+|+.++++.+. . .+++|+||||||++++.++.++|+.++++|
T Consensus 59 l~G~G~S~~------------~~~~~~~~~~~~~~~~~i~~l~----~--~~~~LvG~S~GG~va~~~a~~~p~~v~~lv 120 (276)
T TIGR02240 59 VPGVGGSST------------PRHPYRFPGLAKLAARMLDYLD----Y--GQVNAIGVSWGGALAQQFAHDYPERCKKLI 120 (276)
T ss_pred CCCCCCCCC------------CCCcCcHHHHHHHHHHHHHHhC----c--CceEEEEECHHHHHHHHHHHHCHHHhhheE
Confidence 589999973 1112345666677777766653 1 279999999999999999999999999999
Q ss_pred EecCccc
Q 036711 81 ASSAPIL 87 (111)
Q Consensus 81 ~~~~~~~ 87 (111)
+++++..
T Consensus 121 l~~~~~~ 127 (276)
T TIGR02240 121 LAATAAG 127 (276)
T ss_pred EeccCCc
Confidence 9987653
No 10
>PHA02857 monoglyceride lipase; Provisional
Probab=99.44 E-value=7.1e-13 Score=89.87 Aligned_cols=74 Identities=20% Similarity=0.216 Sum_probs=56.7
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|.+. .....+....++|+.+.+..++...+ ..|++++||||||.+++.++.++|+.++++|
T Consensus 60 ~~G~G~S~~~-----------~~~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p~~i~~li 126 (276)
T PHA02857 60 HIGHGRSNGE-----------KMMIDDFGVYVRDVVQHVVTIKSTYP--GVPVFLLGHSMGATISILAAYKNPNLFTAMI 126 (276)
T ss_pred CCCCCCCCCc-----------cCCcCCHHHHHHHHHHHHHHHHhhCC--CCCEEEEEcCchHHHHHHHHHhCccccceEE
Confidence 5899999741 11123445567888888877765543 3489999999999999999999999999999
Q ss_pred EecCccc
Q 036711 81 ASSAPIL 87 (111)
Q Consensus 81 ~~~~~~~ 87 (111)
+.++++.
T Consensus 127 l~~p~~~ 133 (276)
T PHA02857 127 LMSPLVN 133 (276)
T ss_pred Eeccccc
Confidence 9987553
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.44 E-value=3.9e-13 Score=92.02 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=55.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|...... .......++.+..++|+.++++.+.. .+++++||||||++++.++.++|+.++++|
T Consensus 63 lpG~G~S~~~~~~-----~~~~~~~~~~~~~a~~l~~~l~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~li 131 (294)
T PLN02824 63 LLGYGYSDKPNPR-----SAPPNSFYTFETWGEQLNDFCSDVVG------DPAFVICNSVGGVVGLQAAVDAPELVRGVM 131 (294)
T ss_pred CCCCCCCCCCccc-----cccccccCCHHHHHHHHHHHHHHhcC------CCeEEEEeCHHHHHHHHHHHhChhheeEEE
Confidence 5899999741100 00011245667777788887776532 389999999999999999999999999999
Q ss_pred EecCcc
Q 036711 81 ASSAPI 86 (111)
Q Consensus 81 ~~~~~~ 86 (111)
+++++.
T Consensus 132 li~~~~ 137 (294)
T PLN02824 132 LINISL 137 (294)
T ss_pred EECCCc
Confidence 998654
No 12
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.43 E-value=5.5e-13 Score=91.32 Aligned_cols=69 Identities=14% Similarity=0.059 Sum_probs=54.2
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|... . ..++....++|+.++++++.. .+++++||||||.+++.++.++|+.++++|
T Consensus 61 ~~G~G~S~~~-----------~-~~~~~~~~a~dl~~ll~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~li 122 (295)
T PRK03592 61 LIGMGASDKP-----------D-IDYTFADHARYLDAWFDALGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIA 122 (295)
T ss_pred CCCCCCCCCC-----------C-CCCCHHHHHHHHHHHHHHhCC------CCeEEEEECHHHHHHHHHHHhChhheeEEE
Confidence 5899999741 1 124566777787777776532 389999999999999999999999999999
Q ss_pred EecCccc
Q 036711 81 ASSAPIL 87 (111)
Q Consensus 81 ~~~~~~~ 87 (111)
+++++..
T Consensus 123 l~~~~~~ 129 (295)
T PRK03592 123 FMEAIVR 129 (295)
T ss_pred EECCCCC
Confidence 9987443
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=99.42 E-value=1.1e-12 Score=91.64 Aligned_cols=77 Identities=19% Similarity=0.087 Sum_probs=57.3
Q ss_pred CCcccCCCCCCchhhhhcccccccc-cchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGY-FNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
+||||.|.+..+ ....+. .+.+..++|+.++++.+....+ ..|++++||||||.+++.++.++|+.++++
T Consensus 89 ~~G~G~S~~~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~l~GhSmGG~ia~~~a~~~p~~v~~l 159 (330)
T PRK10749 89 HRGQGRSGRLLD-------DPHRGHVERFNDYVDDLAAFWQQEIQPGP--YRKRYALAHSMGGAILTLFLQRHPGVFDAI 159 (330)
T ss_pred CCCCCCCCCCCC-------CCCcCccccHHHHHHHHHHHHHHHHhcCC--CCCeEEEEEcHHHHHHHHHHHhCCCCcceE
Confidence 699999974210 011122 3566778888888887654432 348999999999999999999999999999
Q ss_pred EEecCcc
Q 036711 80 LASSAPI 86 (111)
Q Consensus 80 i~~~~~~ 86 (111)
|++++..
T Consensus 160 vl~~p~~ 166 (330)
T PRK10749 160 ALCAPMF 166 (330)
T ss_pred EEECchh
Confidence 9887643
No 14
>PLN02965 Probable pheophorbidase
Probab=99.42 E-value=4.7e-13 Score=90.12 Aligned_cols=69 Identities=22% Similarity=0.087 Sum_probs=52.4
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|... ....++.+..++|+.++++.+. . ..+++++||||||.++..++.++|+.+.++|
T Consensus 38 l~G~G~S~~~-----------~~~~~~~~~~a~dl~~~l~~l~----~-~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 101 (255)
T PLN02965 38 LTGAGISLTD-----------SNTVSSSDQYNRPLFALLSDLP----P-DHKVILVGHSIGGGSVTEALCKFTDKISMAI 101 (255)
T ss_pred CCcCCCCCCC-----------ccccCCHHHHHHHHHHHHHhcC----C-CCCEEEEecCcchHHHHHHHHhCchheeEEE
Confidence 5899999631 1113446666777777776542 1 1389999999999999999999999999999
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
++++.
T Consensus 102 l~~~~ 106 (255)
T PLN02965 102 YVAAA 106 (255)
T ss_pred EEccc
Confidence 88765
No 15
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.40 E-value=1.1e-12 Score=84.78 Aligned_cols=72 Identities=28% Similarity=0.353 Sum_probs=55.1
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
.||||.|.+. ......+.+..++|+.++++.+.. .+++++||||||.+++.++.++|+.++++|
T Consensus 32 ~~G~G~s~~~----------~~~~~~~~~~~~~~l~~~l~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v 95 (228)
T PF12697_consen 32 LPGHGRSDPP----------PDYSPYSIEDYAEDLAELLDALGI------KKVILVGHSMGGMIALRLAARYPDRVKGLV 95 (228)
T ss_dssp CTTSTTSSSH----------SSGSGGSHHHHHHHHHHHHHHTTT------SSEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred cCCccccccc----------cccCCcchhhhhhhhhhccccccc------ccccccccccccccccccccccccccccce
Confidence 4899999851 112334556666777777665432 389999999999999999999999999999
Q ss_pred EecCcccc
Q 036711 81 ASSAPILY 88 (111)
Q Consensus 81 ~~~~~~~~ 88 (111)
+++++...
T Consensus 96 l~~~~~~~ 103 (228)
T PF12697_consen 96 LLSPPPPL 103 (228)
T ss_dssp EESESSSH
T ss_pred eecccccc
Confidence 99877753
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.39 E-value=1.1e-12 Score=90.25 Aligned_cols=69 Identities=12% Similarity=0.139 Sum_probs=52.1
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||+|++. .....++.+..++|+.++++++ +. .+++++||||||.++..++.++|+.+.++|
T Consensus 81 l~G~G~S~~~----------~~~~~~~~~~~a~~l~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv 144 (302)
T PRK00870 81 LIGFGRSDKP----------TRREDYTYARHVEWMRSWFEQL----DL--TDVTLVCQDWGGLIGLRLAAEHPDRFARLV 144 (302)
T ss_pred CCCCCCCCCC----------CCcccCCHHHHHHHHHHHHHHc----CC--CCEEEEEEChHHHHHHHHHHhChhheeEEE
Confidence 5899999741 1112345566667777666654 22 389999999999999999999999999999
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
++++.
T Consensus 145 l~~~~ 149 (302)
T PRK00870 145 VANTG 149 (302)
T ss_pred EeCCC
Confidence 88754
No 17
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.36 E-value=2.5e-12 Score=89.42 Aligned_cols=55 Identities=25% Similarity=0.381 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYF 89 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~ 89 (111)
..+.+-+++.+...+.. +.+|+||||||.++..||.+||++|+.+|++++.-++.
T Consensus 144 ~~fvesiE~WR~~~~L~--KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 144 KEFVESIEQWRKKMGLE--KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred HHHHHHHHHHHHHcCCc--ceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 36667777777776655 89999999999999999999999999999999766654
No 18
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.36 E-value=2.7e-12 Score=89.92 Aligned_cols=77 Identities=21% Similarity=0.175 Sum_probs=55.6
Q ss_pred CCcccCCCCCCchhhhhcccccccc-cchhhhHHHHHHHHHHHHHHh------------------cCCCCCEEEEeecHH
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGY-FNSAQAVTDYAEILLYIKEKF------------------NARHSPVIVIGGSYG 61 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~------------------~~~~~~~~l~GhS~G 61 (111)
|||||+|... ....++ .+....++|+.++++.++... ...+.|++++|||||
T Consensus 82 ~rGHG~S~~~---------~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG 152 (332)
T TIGR01607 82 LQGHGESDGL---------QNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG 152 (332)
T ss_pred ccccCCCccc---------cccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence 7999999741 112333 356678899999998876520 111468999999999
Q ss_pred HHHHHHHHHHCCC--------ceeEEEEecCcc
Q 036711 62 GMLATWFRLKYPH--------VALGALASSAPI 86 (111)
Q Consensus 62 G~ia~~~~~~~p~--------~~~~~i~~~~~~ 86 (111)
|.+++.++.++++ .++++|++++++
T Consensus 153 g~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 153 GNIALRLLELLGKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred cHHHHHHHHHhccccccccccccceEEEeccce
Confidence 9999999987653 488888877665
No 19
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.34 E-value=2.5e-12 Score=85.88 Aligned_cols=65 Identities=20% Similarity=0.104 Sum_probs=51.6
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
.||||.|.+. ..++....++|+.++++++. . .+++++||||||++++.++.++|+.++++|
T Consensus 50 ~~G~G~s~~~-------------~~~~~~~~~~d~~~~l~~l~----~--~~~~lvGhS~Gg~va~~~a~~~~~~v~~lv 110 (255)
T PRK10673 50 MRNHGLSPRD-------------PVMNYPAMAQDLLDTLDALQ----I--EKATFIGHSMGGKAVMALTALAPDRIDKLV 110 (255)
T ss_pred CCCCCCCCCC-------------CCCCHHHHHHHHHHHHHHcC----C--CceEEEEECHHHHHHHHHHHhCHhhcceEE
Confidence 5899999741 12456677788888877652 2 379999999999999999999999999998
Q ss_pred EecC
Q 036711 81 ASSA 84 (111)
Q Consensus 81 ~~~~ 84 (111)
++++
T Consensus 111 li~~ 114 (255)
T PRK10673 111 AIDI 114 (255)
T ss_pred EEec
Confidence 8753
No 20
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.32 E-value=5.9e-12 Score=83.57 Aligned_cols=67 Identities=18% Similarity=0.123 Sum_probs=49.8
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCc-eeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV-ALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~-~~~~ 79 (111)
.||||.|.+. . ..+....++|+.++++.+ . ..+++++||||||.+++.++.++|+. ++++
T Consensus 35 ~~G~G~S~~~-----------~--~~~~~~~~~~l~~~l~~~----~--~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~l 95 (242)
T PRK11126 35 LPGHGGSAAI-----------S--VDGFADVSRLLSQTLQSY----N--ILPYWLVGYSLGGRIAMYYACQGLAGGLCGL 95 (242)
T ss_pred CCCCCCCCCc-----------c--ccCHHHHHHHHHHHHHHc----C--CCCeEEEEECHHHHHHHHHHHhCCcccccEE
Confidence 5899999741 1 124556666777666653 2 23899999999999999999999765 9999
Q ss_pred EEecCcc
Q 036711 80 LASSAPI 86 (111)
Q Consensus 80 i~~~~~~ 86 (111)
|+.+++.
T Consensus 96 vl~~~~~ 102 (242)
T PRK11126 96 IVEGGNP 102 (242)
T ss_pred EEeCCCC
Confidence 8876553
No 21
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.29 E-value=8e-12 Score=84.04 Aligned_cols=69 Identities=20% Similarity=0.083 Sum_probs=51.4
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|++. ....++....++|+.++++.+ .. .+++++||||||++++.++.++|+.++++|
T Consensus 62 ~~G~G~S~~~-----------~~~~~~~~~~~~~l~~~i~~~----~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v 124 (278)
T TIGR03056 62 LPGHGFTRAP-----------FRFRFTLPSMAEDLSALCAAE----GL--SPDGVIGHSAGAAIALRLALDGPVTPRMVV 124 (278)
T ss_pred CCCCCCCCCc-----------cccCCCHHHHHHHHHHHHHHc----CC--CCceEEEECccHHHHHHHHHhCCcccceEE
Confidence 5899999741 111245566667777666543 22 378999999999999999999999999998
Q ss_pred EecCcc
Q 036711 81 ASSAPI 86 (111)
Q Consensus 81 ~~~~~~ 86 (111)
+++++.
T Consensus 125 ~~~~~~ 130 (278)
T TIGR03056 125 GINAAL 130 (278)
T ss_pred EEcCcc
Confidence 887654
No 22
>PRK07581 hypothetical protein; Validated
Probab=99.29 E-value=9.5e-12 Score=86.95 Aligned_cols=54 Identities=19% Similarity=0.289 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHhcCCCCC-EEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 31 AVTDYAEILLYIKEKFNARHSP-VIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~~~~~~-~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
..+|+.+....+.+.++.+ + ++|+||||||++++.++.+||++++++|++++..
T Consensus 105 ~~~~~~~~~~~l~~~lgi~--~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 105 IYDNVRAQHRLLTEKFGIE--RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred HHHHHHHHHHHHHHHhCCC--ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 3456665444454445443 7 4799999999999999999999999999886543
No 23
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.29 E-value=6.3e-12 Score=86.82 Aligned_cols=71 Identities=23% Similarity=0.337 Sum_probs=61.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
.||||.|+. +.+...++....+.|+..+++.+... +++++||+||++++..++..+|++++++|
T Consensus 79 lrGyG~Sd~----------P~~~~~Yt~~~l~~di~~lld~Lg~~------k~~lvgHDwGaivaw~la~~~Perv~~lv 142 (322)
T KOG4178|consen 79 LRGYGFSDA----------PPHISEYTIDELVGDIVALLDHLGLK------KAFLVGHDWGAIVAWRLALFYPERVDGLV 142 (322)
T ss_pred CCCCCCCCC----------CCCcceeeHHHHHHHHHHHHHHhccc------eeEEEeccchhHHHHHHHHhChhhcceEE
Confidence 489999984 33445678888999999999888732 89999999999999999999999999999
Q ss_pred EecCccc
Q 036711 81 ASSAPIL 87 (111)
Q Consensus 81 ~~~~~~~ 87 (111)
+++.+..
T Consensus 143 ~~nv~~~ 149 (322)
T KOG4178|consen 143 TLNVPFP 149 (322)
T ss_pred EecCCCC
Confidence 9987776
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.29 E-value=3e-12 Score=83.97 Aligned_cols=68 Identities=19% Similarity=0.202 Sum_probs=51.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|.. ....++....++|+.++++.+. ..+++++||||||++++.++.++|+.++++|
T Consensus 47 ~~G~G~s~~------------~~~~~~~~~~~~~~~~~i~~~~------~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li 108 (251)
T TIGR02427 47 KRGHGLSDA------------PEGPYSIEDLADDVLALLDHLG------IERAVFCGLSLGGLIAQGLAARRPDRVRALV 108 (251)
T ss_pred CCCCCCCCC------------CCCCCCHHHHHHHHHHHHHHhC------CCceEEEEeCchHHHHHHHHHHCHHHhHHHh
Confidence 589999863 1123455666677776666542 2379999999999999999999999999998
Q ss_pred EecCcc
Q 036711 81 ASSAPI 86 (111)
Q Consensus 81 ~~~~~~ 86 (111)
+++++.
T Consensus 109 ~~~~~~ 114 (251)
T TIGR02427 109 LSNTAA 114 (251)
T ss_pred hccCcc
Confidence 887543
No 25
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.28 E-value=6e-12 Score=85.24 Aligned_cols=68 Identities=16% Similarity=0.130 Sum_probs=48.8
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||+|.+.. . .........+|+.++++.+. ..+++++||||||++++.++.++|+.++++|
T Consensus 68 ~~G~G~S~~~~----------~-~~~~~~~~~~~l~~~l~~l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lv 130 (282)
T TIGR03343 68 SPGFNKSDAVV----------M-DEQRGLVNARAVKGLMDALD------IEKAHLVGNSMGGATALNFALEYPDRIGKLI 130 (282)
T ss_pred CCCCCCCCCCc----------C-cccccchhHHHHHHHHHHcC------CCCeeEEEECchHHHHHHHHHhChHhhceEE
Confidence 58999997421 0 01111123566666665542 2389999999999999999999999999999
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
+++++
T Consensus 131 l~~~~ 135 (282)
T TIGR03343 131 LMGPG 135 (282)
T ss_pred EECCC
Confidence 88764
No 26
>PLN02578 hydrolase
Probab=99.28 E-value=1.1e-11 Score=87.31 Aligned_cols=67 Identities=19% Similarity=0.284 Sum_probs=52.5
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
.||||.|+. ....++.....+|+.++++.+.. .+++++||||||.+++.++.++|+.++++|
T Consensus 120 ~~G~G~S~~------------~~~~~~~~~~a~~l~~~i~~~~~------~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lv 181 (354)
T PLN02578 120 LLGFGWSDK------------ALIEYDAMVWRDQVADFVKEVVK------EPAVLVGNSLGGFTALSTAVGYPELVAGVA 181 (354)
T ss_pred CCCCCCCCC------------cccccCHHHHHHHHHHHHHHhcc------CCeEEEEECHHHHHHHHHHHhChHhcceEE
Confidence 489999974 11224556666788888776642 389999999999999999999999999998
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
+++++
T Consensus 182 Lv~~~ 186 (354)
T PLN02578 182 LLNSA 186 (354)
T ss_pred EECCC
Confidence 87654
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.28 E-value=1.4e-11 Score=82.48 Aligned_cols=70 Identities=24% Similarity=0.259 Sum_probs=50.4
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|.... .....++.+...+|+.++++.+ .. .+++++||||||.+++.++.++|+.++++|
T Consensus 61 ~~G~G~s~~~~---------~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~liG~S~Gg~ia~~~a~~~p~~v~~lv 125 (288)
T TIGR01250 61 QLGCGYSDQPD---------DSDELWTIDYFVDELEEVREKL----GL--DKFYLLGHSWGGMLAQEYALKYGQHLKGLI 125 (288)
T ss_pred CCCCCCCCCCC---------cccccccHHHHHHHHHHHHHHc----CC--CcEEEEEeehHHHHHHHHHHhCccccceee
Confidence 58999987411 1111345566666666655543 22 269999999999999999999999999999
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
+.++.
T Consensus 126 l~~~~ 130 (288)
T TIGR01250 126 ISSML 130 (288)
T ss_pred Eeccc
Confidence 87653
No 28
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.28 E-value=1.2e-11 Score=90.38 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=51.2
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHH-HHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYA-EILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
+||||+|... .. ..++.+..++|+. .+++ .++. .+++++||||||++++.++.++|+.++++
T Consensus 240 l~G~G~S~~p----------~~-~~ytl~~~a~~l~~~ll~----~lg~--~k~~LVGhSmGG~iAl~~A~~~Pe~V~~L 302 (481)
T PLN03087 240 LLGFGRSPKP----------AD-SLYTLREHLEMIERSVLE----RYKV--KSFHIVAHSLGCILALALAVKHPGAVKSL 302 (481)
T ss_pred CCCCCCCcCC----------CC-CcCCHHHHHHHHHHHHHH----HcCC--CCEEEEEECHHHHHHHHHHHhChHhccEE
Confidence 5899999731 11 2244555555553 3443 3332 38999999999999999999999999999
Q ss_pred EEecCcccc
Q 036711 80 LASSAPILY 88 (111)
Q Consensus 80 i~~~~~~~~ 88 (111)
|+++++...
T Consensus 303 VLi~~~~~~ 311 (481)
T PLN03087 303 TLLAPPYYP 311 (481)
T ss_pred EEECCCccc
Confidence 999876643
No 29
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.28 E-value=3.2e-11 Score=82.34 Aligned_cols=72 Identities=17% Similarity=0.058 Sum_probs=55.5
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|.. .....+....++|+...++.++.. . ..+++++||||||.+++.++.++|+.++++|
T Consensus 64 l~G~G~S~g------------~~~~~~~~~~~~Dv~~ai~~L~~~-~--~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lV 128 (266)
T TIGR03101 64 LYGCGDSAG------------DFAAARWDVWKEDVAAAYRWLIEQ-G--HPPVTLWGLRLGALLALDAANPLAAKCNRLV 128 (266)
T ss_pred CCCCCCCCC------------ccccCCHHHHHHHHHHHHHHHHhc-C--CCCEEEEEECHHHHHHHHHHHhCccccceEE
Confidence 589999863 111234556678888888877653 2 3489999999999999999999999999999
Q ss_pred EecCccc
Q 036711 81 ASSAPIL 87 (111)
Q Consensus 81 ~~~~~~~ 87 (111)
+.++.+.
T Consensus 129 L~~P~~~ 135 (266)
T TIGR03101 129 LWQPVVS 135 (266)
T ss_pred Eeccccc
Confidence 9885544
No 30
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.26 E-value=9.7e-12 Score=87.23 Aligned_cols=67 Identities=16% Similarity=0.124 Sum_probs=49.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|.+ . .++....++|+.++++.+. .+ ..++++||||||++++.++.++|+.+.++|
T Consensus 107 l~G~g~s~~------------~--~~~~~~~a~dl~~ll~~l~----l~-~~~~lvG~SmGG~vA~~~A~~~P~~V~~Lv 167 (343)
T PRK08775 107 FIGADGSLD------------V--PIDTADQADAIALLLDALG----IA-RLHAFVGYSYGALVGLQFASRHPARVRTLV 167 (343)
T ss_pred CCCCCCCCC------------C--CCCHHHHHHHHHHHHHHcC----CC-cceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 588887742 1 1234556677777766543 21 135799999999999999999999999999
Q ss_pred EecCcc
Q 036711 81 ASSAPI 86 (111)
Q Consensus 81 ~~~~~~ 86 (111)
++++..
T Consensus 168 Li~s~~ 173 (343)
T PRK08775 168 VVSGAH 173 (343)
T ss_pred EECccc
Confidence 987653
No 31
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.25 E-value=1.2e-11 Score=85.51 Aligned_cols=71 Identities=27% Similarity=0.344 Sum_probs=49.7
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||+|.+.. .....+.+...+|+..+++. ++. .+++++||||||.+++.++.++|+.++++|
T Consensus 61 ~~G~G~S~~~~----------~~~~~~~~~~~~dl~~l~~~----l~~--~~~~lvG~S~GG~ia~~~a~~~p~~v~~lv 124 (306)
T TIGR01249 61 QRGCGKSTPHA----------CLEENTTWDLVADIEKLREK----LGI--KNWLVFGGSWGSTLALAYAQTHPEVVTGLV 124 (306)
T ss_pred CCCCCCCCCCC----------CcccCCHHHHHHHHHHHHHH----cCC--CCEEEEEECHHHHHHHHHHHHChHhhhhhe
Confidence 58999997411 11112334445555555443 332 279999999999999999999999999999
Q ss_pred EecCccc
Q 036711 81 ASSAPIL 87 (111)
Q Consensus 81 ~~~~~~~ 87 (111)
+.++...
T Consensus 125 l~~~~~~ 131 (306)
T TIGR01249 125 LRGIFLL 131 (306)
T ss_pred eeccccC
Confidence 9876543
No 32
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.24 E-value=1.2e-11 Score=81.79 Aligned_cols=68 Identities=22% Similarity=0.273 Sum_probs=51.4
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|... ....++.+..++|+.++++.+. ..+++++||||||+++..++.++|+.++++|
T Consensus 47 ~~G~G~S~~~-----------~~~~~~~~~~~~~~~~~i~~~~------~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i 109 (257)
T TIGR03611 47 HRGTGRSPGE-----------LPPGYSIAHMADDVLQLLDALN------IERFHFVGHALGGLIGLQLALRYPERLLSLV 109 (257)
T ss_pred CCCCCCCCCC-----------CcccCCHHHHHHHHHHHHHHhC------CCcEEEEEechhHHHHHHHHHHChHHhHHhe
Confidence 5899999731 1122455666777777776542 2379999999999999999999999999999
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
++++.
T Consensus 110 ~~~~~ 114 (257)
T TIGR03611 110 LINAW 114 (257)
T ss_pred eecCC
Confidence 88753
No 33
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.24 E-value=2.3e-11 Score=86.02 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=51.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHH-HCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRL-KYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~-~~p~~~~~~ 79 (111)
+||||.|++. ... .++.....+|+.++++.+. . .+++++||||||.+++.++. .+|+.++++
T Consensus 122 l~G~G~S~~~----------~~~-~~~~~~~a~~l~~~l~~l~----~--~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~L 184 (360)
T PLN02679 122 LLGFGASDKP----------PGF-SYTMETWAELILDFLEEVV----Q--KPTVLIGNSVGSLACVIAASESTRDLVRGL 184 (360)
T ss_pred CCCCCCCCCC----------CCc-cccHHHHHHHHHHHHHHhc----C--CCeEEEEECHHHHHHHHHHHhcChhhcCEE
Confidence 5899999741 111 2455666677777776542 2 38999999999999998887 579999999
Q ss_pred EEecCcc
Q 036711 80 LASSAPI 86 (111)
Q Consensus 80 i~~~~~~ 86 (111)
|+++++.
T Consensus 185 VLi~~~~ 191 (360)
T PLN02679 185 VLLNCAG 191 (360)
T ss_pred EEECCcc
Confidence 9988654
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.24 E-value=6.9e-11 Score=84.81 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=33.6
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
+++++||||||.+++.++.++|+.++++|+++++.+.
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 8999999999999999999999999999998865543
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.22 E-value=2.7e-11 Score=85.19 Aligned_cols=54 Identities=22% Similarity=0.339 Sum_probs=41.2
Q ss_pred chhhhHHHHHHHHHHHHHHhcCCCCC-EEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 27 NSAQAVTDYAEILLYIKEKFNARHSP-VIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 27 ~~~~~~~d~~~~~~~~~~~~~~~~~~-~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
+.+...+|+.++++ .++.+ + ++++||||||++++.++.++|+.++++|++++..
T Consensus 108 ~~~~~~~~~~~~~~----~l~~~--~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 108 TIRDDVKAQKLLLD----HLGIE--QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred cHHHHHHHHHHHHH----HcCCC--CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 34444555555554 44332 5 9999999999999999999999999999988654
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.22 E-value=4e-11 Score=78.36 Aligned_cols=70 Identities=23% Similarity=0.403 Sum_probs=47.0
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|... ......+....++|+ +..+.+.+. ..+++++||||||.+++.++.++|+.+.++|
T Consensus 35 ~~g~G~s~~~----------~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~li 99 (251)
T TIGR03695 35 LPGHGSSQSP----------DEIERYDFEEAAQDI---LATLLDQLG--IEPFFLVGYSMGGRIALYYALQYPERVQGLI 99 (251)
T ss_pred CCCCCCCCCC----------CccChhhHHHHHHHH---HHHHHHHcC--CCeEEEEEeccHHHHHHHHHHhCchheeeeE
Confidence 5889998631 111223334444441 333333332 2389999999999999999999999999998
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
+.++.
T Consensus 100 l~~~~ 104 (251)
T TIGR03695 100 LESGS 104 (251)
T ss_pred EecCC
Confidence 87754
No 37
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.21 E-value=3.9e-11 Score=82.28 Aligned_cols=69 Identities=12% Similarity=0.163 Sum_probs=48.4
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|... ... .++.....+++.+++ +.+.. .+++++||||||.++..++..+|+.++++|
T Consensus 68 ~~G~G~S~~~----------~~~-~~~~~~~~~~~~~~~----~~~~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lv 130 (286)
T PRK03204 68 YLGFGLSERP----------SGF-GYQIDEHARVIGEFV----DHLGL--DRYLSMGQDWGGPISMAVAVERADRVRGVV 130 (286)
T ss_pred CCCCCCCCCC----------Ccc-ccCHHHHHHHHHHHH----HHhCC--CCEEEEEECccHHHHHHHHHhChhheeEEE
Confidence 5899999741 111 123334444444444 44432 379999999999999999999999999999
Q ss_pred EecCcc
Q 036711 81 ASSAPI 86 (111)
Q Consensus 81 ~~~~~~ 86 (111)
+++++.
T Consensus 131 l~~~~~ 136 (286)
T PRK03204 131 LGNTWF 136 (286)
T ss_pred EECccc
Confidence 887654
No 38
>PRK06489 hypothetical protein; Provisional
Probab=99.21 E-value=5.9e-11 Score=83.79 Aligned_cols=75 Identities=19% Similarity=0.256 Sum_probs=47.0
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCE-EEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPV-IVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
+||||.|+...+. .......++.+..++|+.+++ .+.++.+ ++ +++||||||++++.++.++|+.++++
T Consensus 113 l~GhG~S~~p~~~-----~~~~~~~~~~~~~a~~~~~~l---~~~lgi~--~~~~lvG~SmGG~vAl~~A~~~P~~V~~L 182 (360)
T PRK06489 113 GIGHGKSSKPSDG-----LRAAFPRYDYDDMVEAQYRLV---TEGLGVK--HLRLILGTSMGGMHAWMWGEKYPDFMDAL 182 (360)
T ss_pred CCCCCCCCCCCcC-----CCCCCCcccHHHHHHHHHHHH---HHhcCCC--ceeEEEEECHHHHHHHHHHHhCchhhhee
Confidence 5899999731100 000011233444444444432 2333322 56 48999999999999999999999999
Q ss_pred EEecCc
Q 036711 80 LASSAP 85 (111)
Q Consensus 80 i~~~~~ 85 (111)
|++++.
T Consensus 183 VLi~s~ 188 (360)
T PRK06489 183 MPMASQ 188 (360)
T ss_pred eeeccC
Confidence 988754
No 39
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.21 E-value=4.2e-11 Score=81.80 Aligned_cols=70 Identities=17% Similarity=0.139 Sum_probs=49.8
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|.+. .....+.+...+++.++++.+. . ..+++++||||||+++..++.++|+.++++|
T Consensus 53 l~g~G~s~~~-----------~~~~~~~~~~~~~l~~~i~~l~----~-~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv 116 (273)
T PLN02211 53 LKSAGIDQSD-----------ADSVTTFDEYNKPLIDFLSSLP----E-NEKVILVGHSAGGLSVTQAIHRFPKKICLAV 116 (273)
T ss_pred ccCCCCCCCC-----------cccCCCHHHHHHHHHHHHHhcC----C-CCCEEEEEECchHHHHHHHHHhChhheeEEE
Confidence 5788887531 1112445555566666655432 1 2489999999999999999999999999999
Q ss_pred EecCcc
Q 036711 81 ASSAPI 86 (111)
Q Consensus 81 ~~~~~~ 86 (111)
++++.+
T Consensus 117 ~~~~~~ 122 (273)
T PLN02211 117 YVAATM 122 (273)
T ss_pred Eecccc
Confidence 987643
No 40
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.17 E-value=4.6e-11 Score=80.19 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=32.1
Q ss_pred CCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
.+++++||||||.+++.++.++|+.++++|+++++
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 37999999999999999999999999999988654
No 41
>PLN02511 hydrolase
Probab=99.16 E-value=2e-10 Score=82.09 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=55.8
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCc--eeE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV--ALG 78 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~--~~~ 78 (111)
+||||.|... ...++ .....+|+.++++++..+++ ..+++++||||||.+++.++.++|+. +.+
T Consensus 137 ~rG~G~s~~~-----------~~~~~-~~~~~~Dl~~~i~~l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~ 202 (388)
T PLN02511 137 SRGCADSPVT-----------TPQFY-SASFTGDLRQVVDHVAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSG 202 (388)
T ss_pred cCCCCCCCCC-----------CcCEE-cCCchHHHHHHHHHHHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceE
Confidence 5899999631 11111 24567899999999988764 34899999999999999999999987 788
Q ss_pred EEEecCcc
Q 036711 79 ALASSAPI 86 (111)
Q Consensus 79 ~i~~~~~~ 86 (111)
++++++|.
T Consensus 203 ~v~is~p~ 210 (388)
T PLN02511 203 AVSLCNPF 210 (388)
T ss_pred EEEECCCc
Confidence 87777665
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.15 E-value=3.1e-10 Score=81.34 Aligned_cols=71 Identities=24% Similarity=0.235 Sum_probs=53.8
Q ss_pred CCcccCCCCCCchhhhhcccccccc-cchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC---ce
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGY-FNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH---VA 76 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~---~~ 76 (111)
+||||+|.. ..++ .+.+..++|+.++++.+..+.+ ..+++++||||||.+++.++. +|+ .+
T Consensus 171 ~rGhG~S~~------------~~~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a~-~p~~~~~v 235 (395)
T PLN02652 171 WIGHGGSDG------------LHGYVPSLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAAS-YPSIEDKL 235 (395)
T ss_pred CCCCCCCCC------------CCCCCcCHHHHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHHh-ccCccccc
Confidence 689999974 1122 2456677899999999886643 348999999999999998775 564 78
Q ss_pred eEEEEecCcc
Q 036711 77 LGALASSAPI 86 (111)
Q Consensus 77 ~~~i~~~~~~ 86 (111)
+++|+.++..
T Consensus 236 ~glVL~sP~l 245 (395)
T PLN02652 236 EGIVLTSPAL 245 (395)
T ss_pred ceEEEECccc
Confidence 9999987654
No 43
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.14 E-value=1.7e-10 Score=75.51 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=32.2
Q ss_pred CCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
.+++++||||||.+++.++.++|+.+.++|++++..
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 389999999999999999999999999998876543
No 44
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.11 E-value=2.2e-10 Score=81.82 Aligned_cols=73 Identities=11% Similarity=0.023 Sum_probs=54.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|.... ......++....++|+.++++++. . .+++++||||||++++.++.++|+.+.++|
T Consensus 161 lpG~G~S~~p~--------~~~~~~ys~~~~a~~l~~~i~~l~----~--~~~~LvG~s~GG~ia~~~a~~~P~~v~~lI 226 (383)
T PLN03084 161 WLGFGFSDKPQ--------PGYGFNYTLDEYVSSLESLIDELK----S--DKVSLVVQGYFSPPVVKYASAHPDKIKKLI 226 (383)
T ss_pred CCCCCCCCCCc--------ccccccCCHHHHHHHHHHHHHHhC----C--CCceEEEECHHHHHHHHHHHhChHhhcEEE
Confidence 58999997411 000112455666777777776653 2 279999999999999999999999999999
Q ss_pred EecCccc
Q 036711 81 ASSAPIL 87 (111)
Q Consensus 81 ~~~~~~~ 87 (111)
+++++..
T Consensus 227 Li~~~~~ 233 (383)
T PLN03084 227 LLNPPLT 233 (383)
T ss_pred EECCCCc
Confidence 9997753
No 45
>PRK10985 putative hydrolase; Provisional
Probab=99.04 E-value=1.2e-09 Score=76.15 Aligned_cols=55 Identities=25% Similarity=0.369 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCc--eeEEEEecCccc
Q 036711 31 AVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV--ALGALASSAPIL 87 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~--~~~~i~~~~~~~ 87 (111)
..+|+.++++.++++++ ..+++++||||||.+++.++.++++. +.++|++++|..
T Consensus 113 ~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 113 ETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred chHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 46888888888887764 34899999999999988888877654 788888887764
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.03 E-value=7.7e-10 Score=77.72 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=47.5
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|.+. ....+.....+++.++++ .+.. .+++++||||||.++..++.++|+.+.++|
T Consensus 165 ~~g~G~s~~~------------~~~~~~~~~~~~~~~~~~----~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv 226 (371)
T PRK14875 165 LPGHGASSKA------------VGAGSLDELAAAVLAFLD----ALGI--ERAHLVGHSMGGAVALRLAARAPQRVASLT 226 (371)
T ss_pred CCCCCCCCCC------------CCCCCHHHHHHHHHHHHH----hcCC--ccEEEEeechHHHHHHHHHHhCchheeEEE
Confidence 4789988631 112234444445544443 3332 379999999999999999999999999999
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
+++++
T Consensus 227 ~~~~~ 231 (371)
T PRK14875 227 LIAPA 231 (371)
T ss_pred EECcC
Confidence 88765
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.02 E-value=2.8e-09 Score=72.87 Aligned_cols=71 Identities=13% Similarity=-0.008 Sum_probs=53.1
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||+|.+ .. .+.....+|+.+.++.++.+.+. ..+++++||||||.+++.++.. ++.++++|
T Consensus 65 l~G~G~S~~------------~~--~~~~~~~~d~~~~~~~l~~~~~g-~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~li 128 (274)
T TIGR03100 65 YRGMGDSEG------------EN--LGFEGIDADIAAAIDAFREAAPH-LRRIVAWGLCDAASAALLYAPA-DLRVAGLV 128 (274)
T ss_pred CCCCCCCCC------------CC--CCHHHHHHHHHHHHHHHHhhCCC-CCcEEEEEECHHHHHHHHHhhh-CCCccEEE
Confidence 589999863 11 23445678899999988766421 1369999999999999999765 56799999
Q ss_pred EecCccc
Q 036711 81 ASSAPIL 87 (111)
Q Consensus 81 ~~~~~~~ 87 (111)
+.++++.
T Consensus 129 l~~p~~~ 135 (274)
T TIGR03100 129 LLNPWVR 135 (274)
T ss_pred EECCccC
Confidence 9987654
No 48
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.00 E-value=6.4e-10 Score=75.78 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=50.0
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH--CCCceeE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK--YPHVALG 78 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~--~p~~~~~ 78 (111)
.||||+|.- ++...++.+..+.|+.++++++..+. ..+++|+||||||.|+.+.+.. -|. +.|
T Consensus 110 lRgHGeTk~-----------~~e~dlS~eT~~KD~~~~i~~~fge~---~~~iilVGHSmGGaIav~~a~~k~lps-l~G 174 (343)
T KOG2564|consen 110 LRGHGETKV-----------ENEDDLSLETMSKDFGAVIKELFGEL---PPQIILVGHSMGGAIAVHTAASKTLPS-LAG 174 (343)
T ss_pred ccccCcccc-----------CChhhcCHHHHHHHHHHHHHHHhccC---CCceEEEeccccchhhhhhhhhhhchh-hhc
Confidence 499999973 23334778889999999988876443 3479999999999999988764 454 666
Q ss_pred EEEe
Q 036711 79 ALAS 82 (111)
Q Consensus 79 ~i~~ 82 (111)
++.+
T Consensus 175 l~vi 178 (343)
T KOG2564|consen 175 LVVI 178 (343)
T ss_pred eEEE
Confidence 6444
No 49
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.99 E-value=2.2e-09 Score=75.61 Aligned_cols=59 Identities=14% Similarity=0.243 Sum_probs=47.7
Q ss_pred hhhhH-HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 28 SAQAV-TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 28 ~~~~~-~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
....+ +|+.+.++.+....+. .+++++||||||++++.++..+|+.++++|++++|+..
T Consensus 114 ~~d~~~~~~~~~v~~l~~~~~~--~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 114 LDDYINGYIDKCVDYICRTSKL--DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--CcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 34444 4577788888777643 48999999999999999999999999999999887753
No 50
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.95 E-value=2.6e-09 Score=76.09 Aligned_cols=55 Identities=27% Similarity=0.370 Sum_probs=42.7
Q ss_pred cchhhhHHHHHHHHHHHHHHhcCCCCC-EEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 26 FNSAQAVTDYAEILLYIKEKFNARHSP-VIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 26 ~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
++....++|+.++++.+ +.+ + ++++||||||++++.++.++|+.++++|++++..
T Consensus 127 ~~~~~~~~~~~~~l~~l----~~~--~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----GIT--RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCHHHHHHHHHHHHHHh----CCC--CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 45555666666666554 332 5 5899999999999999999999999999987654
No 51
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.95 E-value=6.4e-09 Score=68.50 Aligned_cols=57 Identities=21% Similarity=0.315 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccc
Q 036711 31 AVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPIL 87 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~ 87 (111)
...|+.++++.+..++..+..+++++||||||.+++.++.++|+.+.+++..+++.+
T Consensus 75 ~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 75 EVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred cHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 456777888888877666666899999999999999999999999999877776654
No 52
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=98.95 E-value=2.7e-10 Score=80.98 Aligned_cols=90 Identities=30% Similarity=0.445 Sum_probs=77.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
||+||.|.| .+.+|.+++.++.+.|.+.+++.++.-+ ..+|+--|-|-||+.++.+...||+.+++.|
T Consensus 96 hRfF~~SrP---------~p~DW~~Lti~QAA~D~Hri~~A~K~iY---~~kWISTG~SKGGmTa~y~rrFyP~DVD~tV 163 (448)
T PF05576_consen 96 HRFFGPSRP---------EPADWSYLTIWQAASDQHRIVQAFKPIY---PGKWISTGGSKGGMTAVYYRRFYPDDVDGTV 163 (448)
T ss_pred EeeccCCCC---------CCCCcccccHhHhhHHHHHHHHHHHhhc---cCCceecCcCCCceeEEEEeeeCCCCCCeee
Confidence 899999998 4568999999999999999999998766 3479999999999999999999999999999
Q ss_pred EecCcccc-cccCCCchhhHHHH
Q 036711 81 ASSAPILY-FDDITPQNGYYSIV 102 (111)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~ 102 (111)
...+|... ..++.....|++.+
T Consensus 164 aYVAP~~~~~~eD~~y~~Fl~~V 186 (448)
T PF05576_consen 164 AYVAPNDVVNREDSRYDRFLEKV 186 (448)
T ss_pred eeecccccCcccchhHHHHHHhc
Confidence 99989864 34555555677655
No 53
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.95 E-value=1.7e-09 Score=77.49 Aligned_cols=54 Identities=20% Similarity=0.369 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEE-EEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 31 AVTDYAEILLYIKEKFNARHSPVI-VIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~~~~~~~~-l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
.++|+.+.+..+.+.++.. ++. ++||||||++++.++.++|+.++++|++++..
T Consensus 142 t~~d~~~~~~~ll~~lgi~--~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 142 TILDFVRVQKELIKSLGIA--RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred cHHHHHHHHHHHHHHcCCC--CceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 4455555555555555443 565 99999999999999999999999998886543
No 54
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.93 E-value=1.1e-08 Score=74.14 Aligned_cols=56 Identities=20% Similarity=0.160 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecC
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSA 84 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~ 84 (111)
....+++.++++.+...+...-.+++|+||||||.++..++.++|.++.+++++.+
T Consensus 97 ~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDP 152 (442)
T TIGR03230 97 KLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDP 152 (442)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcC
Confidence 34456778888887655443334899999999999999999999999999998875
No 55
>PRK13604 luxD acyl transferase; Provisional
Probab=98.90 E-value=6.7e-09 Score=72.10 Aligned_cols=69 Identities=10% Similarity=-0.001 Sum_probs=49.3
Q ss_pred CCcc-cCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 1 HRYY-GKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 1 hrg~-G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
.||+ |.|.. .+...+......|+..++++++... ..++.|+||||||.++...+... .++++
T Consensus 72 ~rg~~GeS~G------------~~~~~t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~v~~l 134 (307)
T PRK13604 72 SLHHVGLSSG------------TIDEFTMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--DLSFL 134 (307)
T ss_pred CCCCCCCCCC------------ccccCcccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--CCCEE
Confidence 3676 88863 3333444445789999999998752 34799999999999987666543 38888
Q ss_pred EEecCcc
Q 036711 80 LASSAPI 86 (111)
Q Consensus 80 i~~~~~~ 86 (111)
|+.++..
T Consensus 135 I~~sp~~ 141 (307)
T PRK13604 135 ITAVGVV 141 (307)
T ss_pred EEcCCcc
Confidence 8877544
No 56
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.90 E-value=4.2e-09 Score=86.27 Aligned_cols=75 Identities=19% Similarity=0.171 Sum_probs=49.8
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||||.|...... +.......++.+...+++.++++.+ .. .+++++||||||++++.++.++|+.++++|
T Consensus 1405 l~G~G~S~~~~~~----~~~~~~~~~si~~~a~~l~~ll~~l----~~--~~v~LvGhSmGG~iAl~~A~~~P~~V~~lV 1474 (1655)
T PLN02980 1405 LPGHGGSKIQNHA----KETQTEPTLSVELVADLLYKLIEHI----TP--GKVTLVGYSMGARIALYMALRFSDKIEGAV 1474 (1655)
T ss_pred CCCCCCCCCcccc----ccccccccCCHHHHHHHHHHHHHHh----CC--CCEEEEEECHHHHHHHHHHHhChHhhCEEE
Confidence 5899999742100 0000111234445555555555543 22 389999999999999999999999999998
Q ss_pred EecCc
Q 036711 81 ASSAP 85 (111)
Q Consensus 81 ~~~~~ 85 (111)
++++.
T Consensus 1475 lis~~ 1479 (1655)
T PLN02980 1475 IISGS 1479 (1655)
T ss_pred EECCC
Confidence 87653
No 57
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.88 E-value=1.2e-08 Score=74.11 Aligned_cols=59 Identities=20% Similarity=0.184 Sum_probs=47.5
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCc----eeEEEEecCccccc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV----ALGALASSAPILYF 89 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~----~~~~i~~~~~~~~~ 89 (111)
...++++.++++.+.+..+ ..|++|+||||||.++..++..+|+. |+.+|.+++|....
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 4556788888888877654 34899999999999999999998874 67888888876543
No 58
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.87 E-value=6.8e-09 Score=72.81 Aligned_cols=58 Identities=19% Similarity=0.310 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE---EecCccccccc
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL---ASSAPILYFDD 91 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i---~~~~~~~~~~~ 91 (111)
+.+..+.++.+..+.. ..+++++||||||+++..+|..+|+.++++| +++++....+.
T Consensus 111 ~~~~v~~i~~~~~~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~ 171 (326)
T KOG1454|consen 111 LRELVELIRRFVKEVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPK 171 (326)
T ss_pred hhHHHHHHHHHHHhhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCc
Confidence 4455555555555443 3379999999999999999999999999999 77766665443
No 59
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.87 E-value=2.4e-08 Score=66.76 Aligned_cols=73 Identities=19% Similarity=0.188 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHh---cCCCCCEEEEeecHHHHHHHHHHHHCC---CceeEEEEecCcccccccC--CCchhhHHHHHHH
Q 036711 34 DYAEILLYIKEKF---NARHSPVIVIGGSYGGMLATWFRLKYP---HVALGALASSAPILYFDDI--TPQNGYYSIVTRD 105 (111)
Q Consensus 34 d~~~~~~~~~~~~---~~~~~~~~l~GhS~GG~ia~~~~~~~p---~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~ 105 (111)
-+.+.++.+.+.+ .....+++++||||||.++..++...+ +.++.+|.+++|....+-. .....|++.+.+.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~~~~d~~~~~~y~~~~~~ 144 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSPLAFDRSLDRFYKRLNNF 144 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCccccchHHHHHHHHHHHHH
Confidence 3444455554444 234568999999999999998887644 4699999999998765522 2233455554443
Q ss_pred H
Q 036711 106 F 106 (111)
Q Consensus 106 ~ 106 (111)
.
T Consensus 145 ~ 145 (225)
T PF07819_consen 145 W 145 (225)
T ss_pred H
Confidence 3
No 60
>PRK10566 esterase; Provisional
Probab=98.83 E-value=1.7e-08 Score=67.53 Aligned_cols=55 Identities=24% Similarity=0.206 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecC
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSA 84 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~ 84 (111)
..++|+.++++.+......+..++.++||||||.+++.++.++|+...++++.++
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~ 140 (249)
T PRK10566 86 QNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGS 140 (249)
T ss_pred HHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCc
Confidence 4467777777777654333455899999999999999999998875555554443
No 61
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.81 E-value=1.5e-08 Score=75.33 Aligned_cols=72 Identities=14% Similarity=0.083 Sum_probs=55.7
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
+||+|.|.. ...... ...++|+.++++++..+- ..+.++.++||||||.+++.++..+|+.++++|
T Consensus 61 ~RG~g~S~g------------~~~~~~-~~~~~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv 126 (550)
T TIGR00976 61 TRGRGASEG------------EFDLLG-SDEAADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIA 126 (550)
T ss_pred ccccccCCC------------ceEecC-cccchHHHHHHHHHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEe
Confidence 589999973 122222 467789999999987652 223589999999999999999999999999998
Q ss_pred EecCcc
Q 036711 81 ASSAPI 86 (111)
Q Consensus 81 ~~~~~~ 86 (111)
..++..
T Consensus 127 ~~~~~~ 132 (550)
T TIGR00976 127 PQEGVW 132 (550)
T ss_pred ecCccc
Confidence 766543
No 62
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.78 E-value=3.7e-08 Score=71.13 Aligned_cols=51 Identities=14% Similarity=0.104 Sum_probs=39.5
Q ss_pred HHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccc
Q 036711 37 EILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPIL 87 (111)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~ 87 (111)
.+++.+...-..+..++.++||||||.+++.++..+|++++++|+.+++..
T Consensus 251 avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 251 AVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred HHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 444444433222445899999999999999999999999999999887753
No 63
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.76 E-value=3.4e-08 Score=67.80 Aligned_cols=54 Identities=15% Similarity=0.122 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
.+++.++++.+.+..+....+++++||||||.++..++.++|+.+.+++++.+.
T Consensus 93 ~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa 146 (275)
T cd00707 93 GAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCC
Confidence 356777788776654333348999999999999999999999999999988644
No 64
>PRK05855 short chain dehydrogenase; Validated
Probab=98.75 E-value=1.5e-08 Score=74.86 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=47.2
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH--CCCceeE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK--YPHVALG 78 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~--~p~~~~~ 78 (111)
+||||.|.+. .....++.+..++|+.++++.+.. ..|++++||||||++++.++.+ .+..+..
T Consensus 59 ~~G~G~S~~~----------~~~~~~~~~~~a~dl~~~i~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~ 123 (582)
T PRK05855 59 VRGAGRSSAP----------KRTAAYTLARLADDFAAVIDAVSP-----DRPVHLLAHDWGSIQGWEAVTRPRAAGRIAS 123 (582)
T ss_pred CCCCCCCCCC----------CcccccCHHHHHHHHHHHHHHhCC-----CCcEEEEecChHHHHHHHHHhCccchhhhhh
Confidence 5899999741 122345677888888888876532 2369999999999999888766 2334444
Q ss_pred EEEecCc
Q 036711 79 ALASSAP 85 (111)
Q Consensus 79 ~i~~~~~ 85 (111)
++..+++
T Consensus 124 ~~~~~~~ 130 (582)
T PRK05855 124 FTSVSGP 130 (582)
T ss_pred heeccCC
Confidence 4444433
No 65
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.74 E-value=2.9e-08 Score=66.93 Aligned_cols=68 Identities=16% Similarity=0.268 Sum_probs=55.7
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
+|+|.|...+ +.....+|+.++.++++++.+ .+.+++++|+|||...+..+|.+.| +.++|+
T Consensus 97 SGyG~S~G~p---------------sE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 97 SGYGRSSGKP---------------SERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred ccccccCCCc---------------ccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEE
Confidence 6888887421 122567899999999999986 5669999999999999999999999 899999
Q ss_pred ecCccc
Q 036711 82 SSAPIL 87 (111)
Q Consensus 82 ~~~~~~ 87 (111)
.++-..
T Consensus 159 ~SPf~S 164 (258)
T KOG1552|consen 159 HSPFTS 164 (258)
T ss_pred eccchh
Confidence 886443
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.73 E-value=2.6e-08 Score=64.64 Aligned_cols=50 Identities=24% Similarity=0.330 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccc
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPIL 87 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~ 87 (111)
.+++..+++. ++.. +++++||||||.++..++.++|+.+.++|+.+++..
T Consensus 75 ~~~~~~~~~~----~~~~--~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 75 ADDLAALLDA----LGLE--KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHHHH----hCCC--ceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 4555555553 3222 599999999999999999999999999999887654
No 67
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.71 E-value=6.7e-08 Score=67.06 Aligned_cols=70 Identities=23% Similarity=0.243 Sum_probs=52.1
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHH-HHHHHHHHHCCCceeEEE
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGG-MLATWFRLKYPHVALGAL 80 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG-~ia~~~~~~~p~~~~~~i 80 (111)
|.||.|.. ..-.+...+.+|+..+++..+.... ..++.++|||||| .+++....++|+.+..+|
T Consensus 89 RnHG~Sp~-------------~~~h~~~~ma~dv~~Fi~~v~~~~~--~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rli 153 (315)
T KOG2382|consen 89 RNHGSSPK-------------ITVHNYEAMAEDVKLFIDGVGGSTR--LDPVVLLGHSMGGVKVAMAETLKKPDLIERLI 153 (315)
T ss_pred ccCCCCcc-------------ccccCHHHHHHHHHHHHHHcccccc--cCCceecccCcchHHHHHHHHHhcCcccceeE
Confidence 78999863 1223366778899999988865422 2389999999999 788888889999998886
Q ss_pred Ee-cCcc
Q 036711 81 AS-SAPI 86 (111)
Q Consensus 81 ~~-~~~~ 86 (111)
+. .+|.
T Consensus 154 v~D~sP~ 160 (315)
T KOG2382|consen 154 VEDISPG 160 (315)
T ss_pred EEecCCc
Confidence 65 4443
No 68
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.71 E-value=3.7e-08 Score=64.69 Aligned_cols=58 Identities=22% Similarity=0.328 Sum_probs=49.1
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
...++|+.+.++.+.++...+..++.++|||+||.+++.++.++|+.++++|..++..
T Consensus 42 ~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~ 99 (213)
T PF00326_consen 42 QADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVS 99 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-S
T ss_pred ccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeeeeccceec
Confidence 3567899999999988765556689999999999999999999999999988877544
No 69
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.70 E-value=4.3e-08 Score=69.05 Aligned_cols=57 Identities=21% Similarity=0.387 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEE-EEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVI-VIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~-l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
-.++|++..-+.+.+.++++ ++. ++|.|||||.++.++..||+++..+|.++++...
T Consensus 127 ~ti~D~V~aq~~ll~~LGI~--~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~ 184 (368)
T COG2021 127 ITIRDMVRAQRLLLDALGIK--KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARL 184 (368)
T ss_pred ccHHHHHHHHHHHHHhcCcc--eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccC
Confidence 56788888888888888776 455 8999999999999999999999988777765544
No 70
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.66 E-value=1.6e-07 Score=62.17 Aligned_cols=66 Identities=20% Similarity=0.140 Sum_probs=50.6
Q ss_pred cccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccccC
Q 036711 22 TLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFDDI 92 (111)
Q Consensus 22 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~~~ 92 (111)
.+-..+.+...+|..+..++++++- ...+.++|-||||.+++.++..+| ++++|.+++|+......
T Consensus 59 ~fl~t~~~DW~~~v~d~Y~~L~~~g---y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~ 124 (243)
T COG1647 59 DFLKTTPRDWWEDVEDGYRDLKEAG---YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR 124 (243)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHcC---CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccch
Confidence 3333455667777777777777442 237999999999999999999999 78999999988754443
No 71
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.66 E-value=3.1e-07 Score=62.80 Aligned_cols=70 Identities=14% Similarity=0.129 Sum_probs=54.6
Q ss_pred cccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCC---CceeEEEEecCccccccc
Q 036711 22 TLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYP---HVALGALASSAPILYFDD 91 (111)
Q Consensus 22 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p---~~~~~~i~~~~~~~~~~~ 91 (111)
+...++.+..++--.++++++..+....+.+++++|||+|+.++++++.+.+ ..|.+++++-|.+....+
T Consensus 55 ~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~ 127 (266)
T PF10230_consen 55 NGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAK 127 (266)
T ss_pred CCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccC
Confidence 3456677777777777777777654223558999999999999999999999 678999998877766554
No 72
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.64 E-value=3.9e-09 Score=69.21 Aligned_cols=75 Identities=19% Similarity=0.091 Sum_probs=56.3
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
||||.|.|. ...+.....+...++..++++.++.. |+.++|+|-||..++..|.++++.|..+|+
T Consensus 80 pGYG~SrPP---------~Rkf~~~ff~~Da~~avdLM~aLk~~------~fsvlGWSdGgiTalivAak~~e~v~rmii 144 (277)
T KOG2984|consen 80 PGYGTSRPP---------ERKFEVQFFMKDAEYAVDLMEALKLE------PFSVLGWSDGGITALIVAAKGKEKVNRMII 144 (277)
T ss_pred CCCCCCCCC---------cccchHHHHHHhHHHHHHHHHHhCCC------CeeEeeecCCCeEEEEeeccChhhhhhhee
Confidence 799999871 12233223445566666777766532 899999999999999999999999999999
Q ss_pred ecCccccccc
Q 036711 82 SSAPILYFDD 91 (111)
Q Consensus 82 ~~~~~~~~~~ 91 (111)
.++..+...+
T Consensus 145 wga~ayvn~~ 154 (277)
T KOG2984|consen 145 WGAAAYVNHL 154 (277)
T ss_pred ecccceecch
Confidence 8877765444
No 73
>PRK11460 putative hydrolase; Provisional
Probab=98.58 E-value=3.7e-07 Score=61.15 Aligned_cols=53 Identities=23% Similarity=0.203 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
+.+.+.++.+..+...+..+++++||||||.+++.++.++|+.+.++|..++.
T Consensus 85 ~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 85 PTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 34445556655565555568999999999999999999999888888776654
No 74
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.52 E-value=4.7e-07 Score=61.96 Aligned_cols=41 Identities=24% Similarity=0.164 Sum_probs=34.7
Q ss_pred hcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 46 FNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 46 ~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
++.+..+++++||||||.+++.++.++|+.+.++++.++..
T Consensus 133 ~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 133 FPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred CCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 33444589999999999999999999999999998877553
No 75
>PRK11071 esterase YqiA; Provisional
Probab=98.47 E-value=7.7e-07 Score=57.95 Aligned_cols=50 Identities=26% Similarity=0.437 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPIL 87 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~ 87 (111)
++..+.+..+.+++.. .+++++||||||.+++.++.++|. .+|+++++..
T Consensus 45 ~~~~~~l~~l~~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 45 ADAAELLESLVLEHGG--DPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred HHHHHHHHHHHHHcCC--CCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 4556666666665543 389999999999999999999994 3466665544
No 76
>PLN02442 S-formylglutathione hydrolase
Probab=98.46 E-value=9.8e-07 Score=60.73 Aligned_cols=53 Identities=23% Similarity=0.179 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
.+++...++.....+ +..+++++||||||.+++.++.++|+.+.+++..++..
T Consensus 126 ~~~l~~~i~~~~~~~--~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 126 VKELPKLLSDNFDQL--DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHhc--CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 345555555543333 23479999999999999999999999999988877654
No 77
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.46 E-value=8.7e-07 Score=56.95 Aligned_cols=54 Identities=20% Similarity=0.212 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHH-HHCCCceeEEEEecCccc
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFR-LKYPHVALGALASSAPIL 87 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~-~~~p~~~~~~i~~~~~~~ 87 (111)
++.+.+..+.+.+...+.++++||||+|+..++.++ ......+.++++.+++-.
T Consensus 38 ~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp -HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred CHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 566666666666554456899999999999999999 778888999999987654
No 78
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.46 E-value=9.6e-07 Score=60.10 Aligned_cols=62 Identities=18% Similarity=0.278 Sum_probs=46.6
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC-----ceeEEEEecCccccccc
Q 036711 28 SAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH-----VALGALASSAPILYFDD 91 (111)
Q Consensus 28 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~-----~~~~~i~~~~~~~~~~~ 91 (111)
..+...-+..++..+..++... .+.+|||||||+.+..|+..+.. .+.++|.+++|+.....
T Consensus 82 ~~~qa~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~ 148 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILG 148 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccc
Confidence 3455566778888888877655 79999999999999999998654 47999999999877543
No 79
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.42 E-value=6.1e-07 Score=60.13 Aligned_cols=49 Identities=24% Similarity=0.412 Sum_probs=40.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 37 EILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
+++..+...+.....+..+.|+||||..|+.++.++|+.+.+++..|+.
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 5566666666544334899999999999999999999999999999854
No 80
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.42 E-value=1.6e-06 Score=53.11 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecC
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSA 84 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~ 84 (111)
++.++++.+..... +..+++++|||+||.++..++.+. +.++++|++++
T Consensus 45 ~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 45 AVERVLADIRAGYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHHHHHHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHHHHHHhhcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 55555555433222 345899999999999999999998 78999999886
No 81
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.40 E-value=1.4e-06 Score=58.06 Aligned_cols=56 Identities=29% Similarity=0.373 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccc
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPIL 87 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~ 87 (111)
...+.++++++..++..+..+|++.|+|.||+++..++..||+.|.++...++..+
T Consensus 78 ~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 78 VAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred hhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 44567788888888888888999999999999999999999999998866555443
No 82
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.37 E-value=2.1e-06 Score=63.92 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHH----HHHHHC-CCceeEEEEecCccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLAT----WFRLKY-PHVALGALASSAPIL 87 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~----~~~~~~-p~~~~~~i~~~~~~~ 87 (111)
+++.+.++.+.+..+ ..+++++||||||.+++ .++... ++.+++++++++++-
T Consensus 246 ~~i~~al~~v~~~~g--~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 246 DGVIAALEVVEAITG--EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred HHHHHHHHHHHHhcC--CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 457777777776654 33899999999999852 345555 778999999887754
No 83
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.36 E-value=1.3e-06 Score=62.68 Aligned_cols=56 Identities=20% Similarity=0.227 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC------ceeEEEEecCccccc
Q 036711 31 AVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH------VALGALASSAPILYF 89 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~------~~~~~i~~~~~~~~~ 89 (111)
....+...++...... +.|++|+||||||.++..++...+. .|+++|.+++|..-.
T Consensus 102 ~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 3344555555554432 5699999999999999999998864 388999999887643
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.36 E-value=2.1e-06 Score=56.71 Aligned_cols=55 Identities=22% Similarity=0.232 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
+-+.++++...+. ..+..+++++|.|.||++++.++.++|..+.++|.+++.+..
T Consensus 88 ~~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 88 ERLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT
T ss_pred HHHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc
Confidence 3344444443322 244558999999999999999999999999999998876643
No 85
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.33 E-value=1.2e-07 Score=63.03 Aligned_cols=70 Identities=23% Similarity=0.297 Sum_probs=54.4
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
||||+|...+ .+.+ ..-|..++++++..+-..++.+++++|-|+||.++..++.+..+++.++|+
T Consensus 115 RGYG~S~Gsp---------sE~G------L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~iv 179 (300)
T KOG4391|consen 115 RGYGKSEGSP---------SEEG------LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIV 179 (300)
T ss_pred eccccCCCCc---------cccc------eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeee
Confidence 8999998521 1222 234667778888877655677999999999999999999999999999988
Q ss_pred ecCcc
Q 036711 82 SSAPI 86 (111)
Q Consensus 82 ~~~~~ 86 (111)
-++..
T Consensus 180 ENTF~ 184 (300)
T KOG4391|consen 180 ENTFL 184 (300)
T ss_pred echhc
Confidence 76433
No 86
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.32 E-value=2.1e-06 Score=66.24 Aligned_cols=47 Identities=26% Similarity=0.294 Sum_probs=35.9
Q ss_pred chhhhHHHHHHHHHHHH------HHh----cCCCCCEEEEeecHHHHHHHHHHHHCC
Q 036711 27 NSAQAVTDYAEILLYIK------EKF----NARHSPVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 27 ~~~~~~~d~~~~~~~~~------~~~----~~~~~~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+.++.+.|+..+...+. .++ ..+..|++++||||||+++..++....
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 45788899998888887 221 123568999999999999999997533
No 87
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.32 E-value=1e-06 Score=59.17 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHhc--CCCCCEEEEeecHHHHHHHHHHHHCCCc---eeEEEEec
Q 036711 31 AVTDYAEILLYIKEKFN--ARHSPVIVIGGSYGGMLATWFRLKYPHV---ALGALASS 83 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~--~~~~~~~l~GhS~GG~ia~~~~~~~p~~---~~~~i~~~ 83 (111)
...|+..+++.+..++. ..+.|+.++||||||++|.+++.+.... ..++++++
T Consensus 52 ~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg 109 (244)
T COG3208 52 LLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISG 109 (244)
T ss_pred ccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEec
Confidence 34566666666555544 3466999999999999999999875443 45565544
No 88
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.27 E-value=1.5e-05 Score=55.41 Aligned_cols=70 Identities=16% Similarity=0.226 Sum_probs=48.8
Q ss_pred cccccchhhhHHHHHHHHHHHHHHhcC--CCCCEEEEeecHHHHHHHHHHHHCC-----CceeEEEEecCcccccccC
Q 036711 22 TLGYFNSAQAVTDYAEILLYIKEKFNA--RHSPVIVIGGSYGGMLATWFRLKYP-----HVALGALASSAPILYFDDI 92 (111)
Q Consensus 22 ~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~l~GhS~GG~ia~~~~~~~p-----~~~~~~i~~~~~~~~~~~~ 92 (111)
.|+..+.++.++|+.+++++++...+. ...+++|+|||-|+.-+++|+.+.. ..|+++|+-+ |+...+..
T Consensus 77 G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQA-pVSDREa~ 153 (303)
T PF08538_consen 77 GWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQA-PVSDREAI 153 (303)
T ss_dssp TS-S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEE-E---TTST
T ss_pred CcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeC-CCCChhHh
Confidence 566677889999999999999877311 2348999999999999999998754 4699999876 66655544
No 89
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.27 E-value=4.1e-06 Score=52.49 Aligned_cols=54 Identities=19% Similarity=0.147 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC----ceeEEEEecCcccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH----VALGALASSAPILY 88 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~----~~~~~i~~~~~~~~ 88 (111)
..+...++....+.+ ..+++++|||+||.+|..++..... ....++..++|...
T Consensus 12 ~~i~~~~~~~~~~~p--~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 12 NLVLPLLKSALAQYP--DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHCC--CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 445555555544433 4489999999999999999887655 45666777766544
No 90
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.24 E-value=1.8e-06 Score=58.74 Aligned_cols=47 Identities=19% Similarity=0.386 Sum_probs=40.5
Q ss_pred HhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccccccc
Q 036711 45 KFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFDD 91 (111)
Q Consensus 45 ~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~~ 91 (111)
.+..+..+-.++|||+||.+++.....+|+.+..+++.|+.++..++
T Consensus 131 ~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~ 177 (264)
T COG2819 131 RYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNE 177 (264)
T ss_pred ccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCH
Confidence 35555667899999999999999999999999999999988876554
No 91
>PLN02872 triacylglycerol lipase
Probab=98.23 E-value=1.3e-06 Score=62.93 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=41.0
Q ss_pred chhhhH-HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC---ceeEEEEecCccc
Q 036711 27 NSAQAV-TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH---VALGALASSAPIL 87 (111)
Q Consensus 27 ~~~~~~-~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~---~~~~~i~~~~~~~ 87 (111)
+..... .|+.++++++.... ..+++++||||||.+++.++ .+|+ .++.++++++..+
T Consensus 138 s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 138 SWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 344444 79999999987542 24899999999999998555 5776 4666677665543
No 92
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.18 E-value=1.1e-05 Score=57.12 Aligned_cols=49 Identities=18% Similarity=0.411 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEec
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASS 83 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~ 83 (111)
.+.++++.....++...+.+++.|+|.||+-++++|..||+ ++++|+-+
T Consensus 294 A~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 294 AADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred HHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeec
Confidence 34455666666666666689999999999999999999997 77887755
No 93
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.16 E-value=1.1e-05 Score=64.00 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHC-CCceeEEEEecCcc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKY-PHVALGALASSAPI 86 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~-p~~~~~~i~~~~~~ 86 (111)
...+.++.+.++.++... ..+++++||||||.+++.++..+ ++.++++|++++|+
T Consensus 122 ~~~i~~l~~~l~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 122 ADHVVALSEAIDTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred HHHHHHHHHHHHHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 333344444444433222 23799999999999999988755 45799999888775
No 94
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.13 E-value=2.2e-05 Score=51.76 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=28.7
Q ss_pred CCEEEEeecHHHHHHHHHHHH---CCCceeEEEEecCcc
Q 036711 51 SPVIVIGGSYGGMLATWFRLK---YPHVALGALASSAPI 86 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~---~p~~~~~~i~~~~~~ 86 (111)
.|++|+|||+||.+|.++|.+ ....+..++++.++.
T Consensus 66 gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 66 GPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred CCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 399999999999999999876 344588888887544
No 95
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.12 E-value=1.2e-05 Score=51.61 Aligned_cols=41 Identities=20% Similarity=0.274 Sum_probs=35.5
Q ss_pred CCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccc
Q 036711 50 HSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 90 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~ 90 (111)
..|++||+||+|+.+++.++......|.|++++++|-...+
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~ 98 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP 98 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcccc
Confidence 34799999999999999999988889999999987775543
No 96
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.10 E-value=1.4e-05 Score=57.88 Aligned_cols=52 Identities=23% Similarity=0.369 Sum_probs=40.1
Q ss_pred HHHHHHHHHhcC--CCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 37 EILLYIKEKFNA--RHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 37 ~~~~~~~~~~~~--~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
+++-.+.+++.. +....+|.|+||||+.++.++.++|+.+.+++..|+.++.
T Consensus 272 eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww 325 (411)
T PRK10439 272 ELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWW 325 (411)
T ss_pred HHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceec
Confidence 334444444332 3457899999999999999999999999999998877653
No 97
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.10 E-value=1.1e-05 Score=55.09 Aligned_cols=72 Identities=19% Similarity=0.114 Sum_probs=53.8
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
.||.|.|.. .+... ..+..+|..+.++++..+ +..+.+|-++|.|++|...+..+...|..+++++
T Consensus 65 ~RG~g~S~G------------~~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~ 130 (272)
T PF02129_consen 65 VRGTGGSEG------------EFDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIV 130 (272)
T ss_dssp -TTSTTS-S-------------B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEE
T ss_pred CcccccCCC------------ccccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEE
Confidence 389999874 22222 566788999999999887 4445589999999999999999998899999988
Q ss_pred EecCcc
Q 036711 81 ASSAPI 86 (111)
Q Consensus 81 ~~~~~~ 86 (111)
...+..
T Consensus 131 p~~~~~ 136 (272)
T PF02129_consen 131 PQSGWS 136 (272)
T ss_dssp EESE-S
T ss_pred ecccCC
Confidence 766544
No 98
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.10 E-value=2e-05 Score=56.68 Aligned_cols=73 Identities=26% Similarity=0.303 Sum_probs=52.3
Q ss_pred CCcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCc--eeE
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV--ALG 78 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~--~~~ 78 (111)
|||.|.|.-+. .+.+ .....+|+.+++++++.+++ ..|.+.+|.||||.+...|+-+..+. +.+
T Consensus 162 ~RG~~g~~LtT-----------pr~f-~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~ 227 (409)
T KOG1838|consen 162 HRGLGGSKLTT-----------PRLF-TAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIA 227 (409)
T ss_pred CCCCCCCccCC-----------Ccee-ecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCcee
Confidence 78988886422 1122 23456899999999999986 44899999999999999998765543 445
Q ss_pred EEEecCccc
Q 036711 79 ALASSAPIL 87 (111)
Q Consensus 79 ~i~~~~~~~ 87 (111)
.+.++.|.-
T Consensus 228 a~~v~~Pwd 236 (409)
T KOG1838|consen 228 AVAVCNPWD 236 (409)
T ss_pred EEEEeccch
Confidence 555554554
No 99
>PLN00021 chlorophyllase
Probab=98.06 E-value=1.7e-05 Score=55.60 Aligned_cols=34 Identities=21% Similarity=0.131 Sum_probs=29.3
Q ss_pred CCEEEEeecHHHHHHHHHHHHCCC-----ceeEEEEecC
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYPH-----VALGALASSA 84 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p~-----~~~~~i~~~~ 84 (111)
.+++++||||||.+++.++.++++ .+.++|++.+
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred hheEEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 479999999999999999999885 4788887764
No 100
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=98.03 E-value=3e-05 Score=50.15 Aligned_cols=61 Identities=15% Similarity=0.144 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 90 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~ 90 (111)
+....++..+++.+.... ..+..+.++|||||+.++...+...+..++-+|+.++|-....
T Consensus 88 ~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~ 148 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVD 148 (177)
T ss_pred HHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCC
Confidence 345568888888887665 2345799999999999999999886778899999988776543
No 101
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=98.03 E-value=1.8e-05 Score=48.53 Aligned_cols=37 Identities=24% Similarity=0.391 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
+.+.+.++.+..+.+ +.++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 345555555555554 3579999999999999988775
No 102
>COG0400 Predicted esterase [General function prediction only]
Probab=98.02 E-value=2.4e-05 Score=51.82 Aligned_cols=56 Identities=29% Similarity=0.355 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 31 AVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
..+.+.++++.+..+++.+..+++++|+|-|+++++.+..++|..++++|+.++..
T Consensus 79 ~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 79 ETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 34456666777777777766799999999999999999999999999998887544
No 103
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.02 E-value=6.3e-05 Score=51.80 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccccCCCc
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFDDITPQ 95 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~~~~~~ 95 (111)
-.+-..+++.+.+++..+ .+++.+|||.|+-.|+.++..+| ..++++++++-+.+....++
T Consensus 86 n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp 146 (297)
T PF06342_consen 86 NEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRP 146 (297)
T ss_pred hHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCH
Confidence 345556666777776655 48999999999999999999996 56888888877766655443
No 104
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.00 E-value=3.2e-05 Score=57.76 Aligned_cols=63 Identities=8% Similarity=-0.010 Sum_probs=49.6
Q ss_pred cccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHH----HHHHCCC-ceeEEEEecCcccc
Q 036711 24 GYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATW----FRLKYPH-VALGALASSAPILY 88 (111)
Q Consensus 24 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~----~~~~~p~-~~~~~i~~~~~~~~ 88 (111)
...+.+.+++.+.+.++.+++..+ ..++.++|+||||.+++. ++.++++ .|+.++++.+++-.
T Consensus 263 r~~~ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 263 REWGLSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 445667777777777887776654 338999999999999997 7888886 79999998887754
No 105
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.97 E-value=3.2e-05 Score=51.29 Aligned_cols=56 Identities=21% Similarity=0.304 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccc
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 90 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~ 90 (111)
-+.+.++++++.-..+..++.|+|.|.||-+|+.++.++| .|+++|..+++.....
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEec
Confidence 3455666666654445568999999999999999999999 7999988877655433
No 106
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.96 E-value=3.5e-05 Score=51.35 Aligned_cols=52 Identities=21% Similarity=0.213 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHC-----CCceeEEEEecCccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKY-----PHVALGALASSAPIL 87 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~-----p~~~~~~i~~~~~~~ 87 (111)
.++...++.+..+.+ +.++++.|||+||.+|..++... +..+..+.+ ++|-.
T Consensus 112 ~~~~~~~~~~~~~~p--~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tF-g~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQYP--DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTF-GQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhCC--CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEe-CCCCC
Confidence 344444554544433 45899999999999999887653 333554444 44443
No 107
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=97.96 E-value=2.7e-05 Score=51.83 Aligned_cols=71 Identities=18% Similarity=0.234 Sum_probs=51.0
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
+|.|.|.. .+.+-.....++|+..+++.+.... ..--+++|||-||-++..++.++++ +.-+|.
T Consensus 71 ~GnGeS~g------------sf~~Gn~~~eadDL~sV~q~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viN 134 (269)
T KOG4667|consen 71 SGNGESEG------------SFYYGNYNTEADDLHSVIQYFSNSN---RVVPVILGHSKGGDVVLLYASKYHD-IRNVIN 134 (269)
T ss_pred cCCCCcCC------------ccccCcccchHHHHHHHHHHhccCc---eEEEEEEeecCccHHHHHHHHhhcC-chheEE
Confidence 57777763 3344444556699999999987632 1124688999999999999999998 666677
Q ss_pred ecCcccc
Q 036711 82 SSAPILY 88 (111)
Q Consensus 82 ~~~~~~~ 88 (111)
+++-...
T Consensus 135 csGRydl 141 (269)
T KOG4667|consen 135 CSGRYDL 141 (269)
T ss_pred cccccch
Confidence 6655543
No 108
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.95 E-value=7.9e-05 Score=54.78 Aligned_cols=75 Identities=19% Similarity=0.111 Sum_probs=50.9
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcC-CCCCEEEEeecHHHHHHHHHHHHC--------
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNA-RHSPVIVIGGSYGGMLATWFRLKY-------- 72 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~GhS~GG~ia~~~~~~~-------- 72 (111)
+|+|.|... . .....+.+..++|+.++++.+..+.+. ...|++|+||||||..+..++.+-
T Consensus 131 ~G~G~S~~~---------~-~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~ 200 (462)
T PTZ00472 131 AGVGFSYAD---------K-ADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGD 200 (462)
T ss_pred CCcCcccCC---------C-CCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccC
Confidence 688888631 1 111233467788999999988766643 356999999999999887777652
Q ss_pred --CCceeEEEEecCcc
Q 036711 73 --PHVALGALASSAPI 86 (111)
Q Consensus 73 --p~~~~~~i~~~~~~ 86 (111)
.-.++++++-++.+
T Consensus 201 ~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 201 GLYINLAGLAVGNGLT 216 (462)
T ss_pred CceeeeEEEEEecccc
Confidence 11367877666544
No 109
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.94 E-value=2.1e-05 Score=60.41 Aligned_cols=39 Identities=23% Similarity=0.188 Sum_probs=29.4
Q ss_pred CEEEEeecHHHHHHHHHHHH---CCCceeEEEEecCcccccc
Q 036711 52 PVIVIGGSYGGMLATWFRLK---YPHVALGALASSAPILYFD 90 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~---~p~~~~~~i~~~~~~~~~~ 90 (111)
.++++||||||++|...+.. .++.|.-+|..++|....+
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~P 224 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPP 224 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCC
Confidence 49999999999999887753 3445667777787776544
No 110
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.93 E-value=5.7e-05 Score=49.28 Aligned_cols=51 Identities=22% Similarity=0.343 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
++..+.++.+..+... ..+.|+|+||||..|.+++.+++- .+ |+++|.+.+
T Consensus 43 ~~a~~~l~~~i~~~~~--~~~~liGSSlGG~~A~~La~~~~~--~a-vLiNPav~p 93 (187)
T PF05728_consen 43 EEAIAQLEQLIEELKP--ENVVLIGSSLGGFYATYLAERYGL--PA-VLINPAVRP 93 (187)
T ss_pred HHHHHHHHHHHHhCCC--CCeEEEEEChHHHHHHHHHHHhCC--CE-EEEcCCCCH
Confidence 3444444454444432 249999999999999999999863 33 566655543
No 111
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.92 E-value=4.5e-05 Score=50.72 Aligned_cols=42 Identities=19% Similarity=0.161 Sum_probs=28.6
Q ss_pred CCEEEEeecHHHHHHHHHHHHCC-------C-----ceeEEEEecCcccccccC
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYP-------H-----VALGALASSAPILYFDDI 92 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p-------~-----~~~~~i~~~~~~~~~~~~ 92 (111)
.|+.++||||||.++..+..... . .....|.+++|.......
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~~ 131 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRYA 131 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCccc
Confidence 48999999999999987766322 1 223446677787665443
No 112
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.91 E-value=5.5e-05 Score=53.07 Aligned_cols=53 Identities=32% Similarity=0.437 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHH-HHHHHHHHHCCC-ceeEEEEecCcc
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGG-MLATWFRLKYPH-VALGALASSAPI 86 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG-~ia~~~~~~~p~-~~~~~i~~~~~~ 86 (111)
.+|+..++++++...+ ..|+..+|.|+|| +++.+++.+-.+ .+.+.+.++.|.
T Consensus 131 t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 131 TEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred hhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 3899999999988765 4499999999999 666666554333 255666666565
No 113
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.90 E-value=4.2e-05 Score=53.88 Aligned_cols=57 Identities=21% Similarity=0.227 Sum_probs=43.6
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHh-cCCCCCEEEEeecHHHHHHHHHHHHCC
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKF-NARHSPVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~l~GhS~GG~ia~~~~~~~p 73 (111)
||.|.|.. ..+....+.|..+.+++++++. +++...+++.|||+||.+++..+.++.
T Consensus 180 pGVg~S~G---------------~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 180 PGVGSSTG---------------PPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CccccCCC---------------CCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 67787763 2345778899999999998643 344458999999999999998776654
No 114
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.87 E-value=5.6e-05 Score=50.47 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHC
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~ 72 (111)
..+.++.++++.++...+ . +|-||||||||+++.++.+..
T Consensus 57 ~~~~~l~~fI~~Vl~~TG--a-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 57 ESAKQLRAFIDAVLAYTG--A-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHHHHHT-----EEEEEETCHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhhC--C-EEEEEEcCCcCHHHHHHHHHc
Confidence 344678888888887664 3 899999999999999998754
No 115
>PRK10162 acetyl esterase; Provisional
Probab=97.83 E-value=5.9e-05 Score=52.76 Aligned_cols=57 Identities=23% Similarity=0.212 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHHHHH---HhcCCCCCEEEEeecHHHHHHHHHHHHC------CCceeEEEEecCcc
Q 036711 30 QAVTDYAEILLYIKE---KFNARHSPVIVIGGSYGGMLATWFRLKY------PHVALGALASSAPI 86 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~---~~~~~~~~~~l~GhS~GG~ia~~~~~~~------p~~~~~~i~~~~~~ 86 (111)
..++|+.+.++++.+ +++.+..+++++|+|+||.+++.++.+. +..+.++|+..+..
T Consensus 130 ~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 130 QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 356777777777654 3444455899999999999999998753 35678888776543
No 116
>PLN02454 triacylglycerol lipase
Probab=97.79 E-value=0.00017 Score=52.22 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
.+++...++.+.+.++....++++.||||||.+|...+..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3566677777777665333359999999999999998854
No 117
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.79 E-value=0.00013 Score=48.95 Aligned_cols=53 Identities=21% Similarity=0.182 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCC----CceeEEEEecCccccc
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYP----HVALGALASSAPILYF 89 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p----~~~~~~i~~~~~~~~~ 89 (111)
...+.++.+.... +.++++.|||.||.+|...+...+ ++|..+....+|-+..
T Consensus 70 ~A~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 70 SALAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 4445555555544 336999999999999999998844 4577887777676553
No 118
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.76 E-value=6e-05 Score=52.42 Aligned_cols=53 Identities=23% Similarity=0.340 Sum_probs=42.1
Q ss_pred HHHHHHHH-HHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 33 TDYAEILL-YIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 33 ~d~~~~~~-~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
....+++. .+.+.+.++..+++++|.|+||+.++.++.++|+.+.+.+.+++-
T Consensus 250 ~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 250 IEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred HHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 33444444 455666677789999999999999999999999999998877643
No 119
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.74 E-value=0.00014 Score=51.35 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC--ceeEEEEecC
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH--VALGALASSA 84 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~--~~~~~i~~~~ 84 (111)
+.+..++..+....+....+++++|||+||.++..++..... .+..+..+.|
T Consensus 132 ~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 132 RQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred HHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 445566666665544445589999999999999999999887 7878877764
No 120
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.73 E-value=4.4e-05 Score=49.79 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=46.0
Q ss_pred hhhhHHHHHHHHHHHHHH---hcCCCCCEEEEeecHHHHHHHHHHHHCCC----ceeEEEEecCcc
Q 036711 28 SAQAVTDYAEILLYIKEK---FNARHSPVIVIGGSYGGMLATWFRLKYPH----VALGALASSAPI 86 (111)
Q Consensus 28 ~~~~~~d~~~~~~~~~~~---~~~~~~~~~l~GhS~GG~ia~~~~~~~p~----~~~~~i~~~~~~ 86 (111)
....++|+.+.++++.+. ++.+..+++++|+|-||.+++.++....+ .+++++++++..
T Consensus 45 ~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 45 FPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 457788999999988876 33344589999999999999999886443 378888888643
No 121
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.73 E-value=0.0001 Score=48.13 Aligned_cols=56 Identities=21% Similarity=0.338 Sum_probs=41.1
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCC-EEEEeecHHHHHHHHHHHHCCCceeEEEEecCccc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSP-VIVIGGSYGGMLATWFRLKYPHVALGALASSAPIL 87 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~-~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~ 87 (111)
.-.++|..+.+++++.+.+. .+ +.+.|.|+|+.|++.++.+.|+. ...|..+++..
T Consensus 82 iGE~~Da~aaldW~~~~hp~--s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~ 138 (210)
T COG2945 82 IGELEDAAAALDWLQARHPD--SASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPIN 138 (210)
T ss_pred cchHHHHHHHHHHHHhhCCC--chhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCC
Confidence 34578999999999988752 24 47899999999999999998864 33333444443
No 122
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.70 E-value=0.00027 Score=54.98 Aligned_cols=71 Identities=13% Similarity=0.015 Sum_probs=51.6
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHh--------------cCCCCCEEEEeecHHHHHHHH
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKF--------------NARHSPVIVIGGSYGGMLATW 67 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------------~~~~~~~~l~GhS~GG~ia~~ 67 (111)
||.|.|... +. .......+|..++++++..+. ..-+.+|-++|.||||.+++.
T Consensus 288 RGtg~SeG~------------~~-~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~ 354 (767)
T PRK05371 288 IGTRGSDGC------------PT-TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNA 354 (767)
T ss_pred CCCCCCCCc------------Cc-cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHH
Confidence 788888741 11 112456778888888887431 112458999999999999999
Q ss_pred HHHHCCCceeEEEEecCc
Q 036711 68 FRLKYPHVALGALASSAP 85 (111)
Q Consensus 68 ~~~~~p~~~~~~i~~~~~ 85 (111)
+|...|+.++++|..++.
T Consensus 355 aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 355 VATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHhhCCCcceEEEeeCCC
Confidence 999999999998876543
No 123
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.70 E-value=4.2e-05 Score=51.41 Aligned_cols=59 Identities=24% Similarity=0.290 Sum_probs=42.2
Q ss_pred CcccCCCCCCchhhhhcccccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHH
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~ 70 (111)
||.|.|.|... ....+.-.+....|+.+.++.++..++ ..|.+.+||||||.+.-.+.+
T Consensus 66 RG~g~S~p~~~--------~~~~~~~~DwA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 66 RGIGQSRPASL--------SGSQWRYLDWARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred ccccCCCcccc--------ccCccchhhhhhcchHHHHHHHHhhCC--CCceEEeeccccceeeccccc
Confidence 88999987431 122222235566799999999988764 459999999999987766654
No 124
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.66 E-value=4.5e-05 Score=55.57 Aligned_cols=58 Identities=17% Similarity=0.153 Sum_probs=41.7
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCc--------eeEEEEecCcccc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV--------ALGALASSAPILY 88 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~--------~~~~i~~~~~~~~ 88 (111)
++.+..+...++......+ .+|++|++|||||.+..+++..+++. |++.|.+++|...
T Consensus 162 d~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHHHHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 3455666666666555433 36999999999999999999999883 5555666665543
No 125
>PRK10115 protease 2; Provisional
Probab=97.62 E-value=0.00017 Score=55.45 Aligned_cols=57 Identities=23% Similarity=0.217 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
...+|+.+.++++..+--.+..++.+.|.|.||+++...+.++|+.++++|+..+.+
T Consensus 503 ~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 503 NTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred CcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 567899999999887643455689999999999999999999999999998876544
No 126
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.59 E-value=0.00012 Score=55.50 Aligned_cols=56 Identities=20% Similarity=0.217 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
..++|+.+.++.+.+.-..+..++.++|||+||.+++..+.+.| .+++.+...+.+
T Consensus 452 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~ 507 (620)
T COG1506 452 VDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGV 507 (620)
T ss_pred ccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcc
Confidence 46788888888554433335568999999999999999999999 666665555444
No 127
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.58 E-value=0.00039 Score=50.11 Aligned_cols=57 Identities=32% Similarity=0.345 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHhcCCC--CCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 32 VTDYAEILLYIKEKFNARH--SPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~--~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
+.|+...+..++..++..+ .|++++|+|.||.++...+.-.|..++++|=.|+.+.+
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccc
Confidence 3477777777777665433 59999999999999999999999999999888776654
No 128
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.57 E-value=0.00031 Score=48.53 Aligned_cols=59 Identities=25% Similarity=0.255 Sum_probs=43.0
Q ss_pred cccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 22 TLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 22 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
...+.+.++..+++.++++++.-+ .++-+|--.|+.|-..+|.++|+++.|+|++++..
T Consensus 76 ~y~yPsmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 76 GYQYPSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVNPTC 134 (283)
T ss_dssp T-----HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---
T ss_pred cccccCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEecCC
Confidence 455667777777777777777644 69999999999999999999999999999998544
No 129
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.57 E-value=0.00055 Score=46.79 Aligned_cols=38 Identities=18% Similarity=0.055 Sum_probs=30.1
Q ss_pred CCCEEEEeecHHHHHHHHHHHH---CCCceeEEEEecCccc
Q 036711 50 HSPVIVIGGSYGGMLATWFRLK---YPHVALGALASSAPIL 87 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~---~p~~~~~~i~~~~~~~ 87 (111)
..|++|+|+|+||.+|..+|.+ ....+..++++.++..
T Consensus 64 ~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 64 EGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 4499999999999999999886 3345777777776554
No 130
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.55 E-value=0.00015 Score=54.50 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCC-----------C----ceeEEEEecCcccc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYP-----------H----VALGALASSAPILY 88 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p-----------~----~~~~~i~~~~~~~~ 88 (111)
.....+...++.+....+ +.|++|+||||||.++.+++..-. + .|+..|.+++|+.-
T Consensus 194 ~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 194 QTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 444556666666554422 458999999999999999887432 1 26777888877644
No 131
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.54 E-value=0.00066 Score=47.10 Aligned_cols=59 Identities=22% Similarity=0.242 Sum_probs=47.5
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 21 STLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 21 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
..+.+.+.+...+++..+++++.-. .++-+|---|+.|-..+|.+||++|.|+|++++.
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 3555666777777777777766432 6899999999999999999999999999998743
No 132
>PLN02571 triacylglycerol lipase
Probab=97.54 E-value=0.00032 Score=50.77 Aligned_cols=39 Identities=21% Similarity=0.262 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
+++.+.++.+.+.++....++++.||||||.+|...+..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 345555555555554333479999999999999998764
No 133
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.53 E-value=0.00033 Score=49.52 Aligned_cols=56 Identities=14% Similarity=0.119 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCC--CceeEEEEecCcccccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYP--HVALGALASSAPILYFD 90 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p--~~~~~~i~~~~~~~~~~ 90 (111)
+-+...++.+....+ ..++.++||||||.++..++...+ ..++.++.+++|..-..
T Consensus 111 ~ql~~~V~~~l~~~g--a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 111 EQLFAYVDEVLAKTG--AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred HHHHHHHHHHHhhcC--CCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 334444444444432 248999999999999999999988 78999999888775543
No 134
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.51 E-value=0.00021 Score=48.63 Aligned_cols=53 Identities=17% Similarity=0.340 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC-----ceeEEEEecCccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH-----VALGALASSAPIL 87 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~-----~~~~~i~~~~~~~ 87 (111)
.=+..++.++...+..+ ++-++||||||.-...|+..|.. .+..+|.+++|+.
T Consensus 120 ~wlk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 120 KWLKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 34455666677776654 78899999999999999998765 3788899998887
No 135
>PRK04940 hypothetical protein; Provisional
Probab=97.48 E-value=0.00058 Score=44.27 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=29.1
Q ss_pred CCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccc
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 90 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~ 90 (111)
.++.++|+|+||+.|.+++.++. + ..|+++|.+.+..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~ 96 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEE 96 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHH
Confidence 37899999999999999999987 3 4456676666533
No 136
>PLN02162 triacylglycerol lipase
Probab=97.47 E-value=0.00054 Score=50.22 Aligned_cols=52 Identities=21% Similarity=0.173 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH---C-----CCceeEEEEecCcccc
Q 036711 35 YAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK---Y-----PHVALGALASSAPILY 88 (111)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~---~-----p~~~~~~i~~~~~~~~ 88 (111)
+.+.++.+..+.+ +.++++.|||+||.+|..++.. . .+.+.+++..++|-..
T Consensus 264 I~~~L~~lL~k~p--~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVG 323 (475)
T PLN02162 264 IRQMLRDKLARNK--NLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVG 323 (475)
T ss_pred HHHHHHHHHHhCC--CceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCcc
Confidence 3344444444432 4589999999999999987541 1 1224456666655543
No 137
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.45 E-value=0.00026 Score=51.20 Aligned_cols=52 Identities=23% Similarity=0.228 Sum_probs=38.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 37 EILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
.+++++...-.++..++.++|.|+||.++..+|..++++++++|..++++..
T Consensus 247 aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 247 AVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHH 298 (411)
T ss_dssp HHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SC
T ss_pred HHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhh
Confidence 4455554432234558999999999999999999999999999999987644
No 138
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.43 E-value=0.0005 Score=46.35 Aligned_cols=53 Identities=25% Similarity=0.261 Sum_probs=42.0
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEe
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALAS 82 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~ 82 (111)
.....|+.+.++++..+-..+..++.++|.||||.+++.++.+.| .+++.+..
T Consensus 90 ~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~f 142 (236)
T COG0412 90 AEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAF 142 (236)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEe
Confidence 566789999999888664344558999999999999999999888 56555443
No 139
>PLN00413 triacylglycerol lipase
Probab=97.42 E-value=0.00067 Score=49.85 Aligned_cols=51 Identities=25% Similarity=0.221 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH----CC----CceeEEEEecCccc
Q 036711 35 YAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK----YP----HVALGALASSAPIL 87 (111)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~----~p----~~~~~~i~~~~~~~ 87 (111)
+.+.++.+..+.+ +.++++.|||+||++|..++.. .+ ..+.+++..++|-.
T Consensus 270 i~~~Lk~ll~~~p--~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 270 ILRHLKEIFDQNP--TSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHCC--CCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 4444445544443 4489999999999999988742 12 23445666665544
No 140
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.41 E-value=0.00065 Score=55.02 Aligned_cols=53 Identities=19% Similarity=0.115 Sum_probs=37.2
Q ss_pred chhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH---CCCceeEEEEecC
Q 036711 27 NSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK---YPHVALGALASSA 84 (111)
Q Consensus 27 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~---~p~~~~~~i~~~~ 84 (111)
+.+..++++.+.++.+. ...|++++||||||.++..++.+ .++.+..++++.+
T Consensus 1114 ~l~~la~~~~~~i~~~~-----~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1114 SLDEVCEAHLATLLEQQ-----PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CHHHHHHHHHHHHHhhC-----CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 34445555554444321 12489999999999999999985 5778888887764
No 141
>PLN02324 triacylglycerol lipase
Probab=97.40 E-value=0.0011 Score=48.00 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
.+.+-++.+...++.....+++.|||+||.+|...+..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455556666554333479999999999999988753
No 142
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=97.40 E-value=0.00024 Score=46.77 Aligned_cols=54 Identities=19% Similarity=0.230 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecC
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSA 84 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~ 84 (111)
...+|+.+.++.++.+......++.++|.||||.+++.++... +.++++|..-+
T Consensus 77 ~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 77 QVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 4456777777777765423345899999999999999999877 56777766544
No 143
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.35 E-value=0.0026 Score=40.67 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=28.3
Q ss_pred CCCEEEEeecHHHHHHHHHHHH---CCCceeEEEEecCc
Q 036711 50 HSPVIVIGGSYGGMLATWFRLK---YPHVALGALASSAP 85 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~---~p~~~~~~i~~~~~ 85 (111)
..|++++||||||.++..++.+ .+..+.+++++.+.
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 3489999999999999988886 44567788776543
No 144
>PLN02408 phospholipase A1
Probab=97.34 E-value=0.00051 Score=49.09 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
.+.+.++.+.++++....++++.|||+||.+|...+..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 34455555555554333469999999999999988764
No 145
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.33 E-value=0.0009 Score=46.46 Aligned_cols=57 Identities=18% Similarity=0.272 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
..+..+.+++..+..++.++..++++.|-|=||.++..++..+|+.+.++..+++..
T Consensus 123 ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 456678888999999998888899999999999999999999999998885555444
No 146
>PLN02310 triacylglycerol lipase
Probab=97.28 E-value=0.0014 Score=47.48 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=24.8
Q ss_pred CCEEEEeecHHHHHHHHHHHH----CCCceeEEEEecCccc
Q 036711 51 SPVIVIGGSYGGMLATWFRLK----YPHVALGALASSAPIL 87 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~----~p~~~~~~i~~~~~~~ 87 (111)
.++++.|||+||.+|...+.. .+...-.++..++|-.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRV 249 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRV 249 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCc
Confidence 479999999999999988753 3332223455555543
No 147
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.27 E-value=0.001 Score=46.80 Aligned_cols=59 Identities=20% Similarity=0.138 Sum_probs=44.6
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
...+.|....++.+...-..+..++.+.|.|+||.+++.++...|. |++++...+.++.
T Consensus 153 r~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~~~~vP~l~d 211 (320)
T PF05448_consen 153 RRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADVPFLCD 211 (320)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEEEEESESSSS
T ss_pred HHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEEEecCCCccc
Confidence 3456788888888776544556689999999999999999998874 8888777655543
No 148
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.24 E-value=0.00057 Score=49.15 Aligned_cols=38 Identities=13% Similarity=0.054 Sum_probs=26.8
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 90 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~ 90 (111)
++.++|||+||..++..+.+. .++++.|++.+.+++..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD-TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH--TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhhc-cCcceEEEeCCcccCCC
Confidence 589999999999999988876 56888888888877654
No 149
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.23 E-value=0.0015 Score=42.30 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH------CCCceeEEEEecCcccc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK------YPHVALGALASSAPILY 88 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~------~p~~~~~~i~~~~~~~~ 88 (111)
.-..++...++....+-+ +.+++|+|.|.|++++..++.. ..+.|.++++++-|...
T Consensus 62 ~G~~~~~~~i~~~~~~CP--~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 62 AGVANLVRLIEEYAARCP--NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHHHHHHhCC--CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 445667777776666643 4589999999999999999877 23458899999888764
No 150
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.22 E-value=0.0012 Score=43.73 Aligned_cols=42 Identities=24% Similarity=0.277 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHC
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~ 72 (111)
....|+.+..++..+... ++.|++|.|||.|+++...++..+
T Consensus 75 ~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 345677777666666553 356999999999999999998875
No 151
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.19 E-value=0.0016 Score=44.52 Aligned_cols=58 Identities=17% Similarity=0.153 Sum_probs=41.6
Q ss_pred hhhHHHHHHHHHHHHHHh----c----CCCCCEEEEeecHHHHHHHHHHHHC-----CCceeEEEEecCcc
Q 036711 29 AQAVTDYAEILLYIKEKF----N----ARHSPVIVIGGSYGGMLATWFRLKY-----PHVALGALASSAPI 86 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~----~----~~~~~~~l~GhS~GG~ia~~~~~~~-----p~~~~~~i~~~~~~ 86 (111)
...++++.++++++.+.+ + .+-.++.+.|||.||-++..++..+ +..++++|++.+.-
T Consensus 61 ~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 61 TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred chhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 344566666666655432 1 2334799999999999999999887 55799999988433
No 152
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.17 E-value=0.00072 Score=51.40 Aligned_cols=56 Identities=34% Similarity=0.371 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHhcC-CCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccc
Q 036711 31 AVTDYAEILLYIKEKFNA-RHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPIL 87 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~~-~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~ 87 (111)
.++|.++-++.+.++.+. +-.++.+-|+|+||.+++....++|+.++..|+ ++|+-
T Consensus 706 E~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA-GapVT 762 (867)
T KOG2281|consen 706 EVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA-GAPVT 762 (867)
T ss_pred eehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEec-cCcce
Confidence 456777778888877743 444899999999999999999999998888776 44553
No 153
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.16 E-value=0.0014 Score=42.09 Aligned_cols=53 Identities=19% Similarity=0.250 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccccc
Q 036711 35 YAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYF 89 (111)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~ 89 (111)
....+.++...+. ..|.++-||||||-++..++..-...|+++++++-|+.+.
T Consensus 75 ~~~~~aql~~~l~--~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp 127 (213)
T COG3571 75 YIVAIAQLRAGLA--EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP 127 (213)
T ss_pred HHHHHHHHHhccc--CCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCC
Confidence 3344445554432 3489999999999999999887666699999999887664
No 154
>COG0627 Predicted esterase [General function prediction only]
Probab=97.16 E-value=0.00073 Score=47.52 Aligned_cols=38 Identities=26% Similarity=0.118 Sum_probs=33.0
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccccc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYF 89 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~ 89 (111)
...++||||||.=|+.+|.++|+++..+...++.+.+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 57899999999999999999999999887777666554
No 155
>PLN02606 palmitoyl-protein thioesterase
Probab=97.15 E-value=0.0052 Score=42.96 Aligned_cols=59 Identities=15% Similarity=0.191 Sum_probs=44.3
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC--ceeEEEEecCcccccccCCC-c-hhhHHHHHHHHhhhh
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH--VALGALASSAPILYFDDITP-Q-NGYYSIVTRDFRVIY 110 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~--~~~~~i~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 110 (111)
-+.++|+|.||.+...++.+.|+ .++.+|.+++|..-...... + ..+.+...+.+..+|
T Consensus 96 G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p~~C~~~~C~~~~~l~~~~Y 158 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIPKGCNSTFCELLKAVFAVIY 158 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCcccchhhHhHHHHHHHHhhh
Confidence 49999999999999999999987 49999999999887766543 3 234444444444444
No 156
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.15 E-value=0.0013 Score=44.30 Aligned_cols=53 Identities=8% Similarity=-0.074 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH----CC-----CceeEEEEecC
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK----YP-----HVALGALASSA 84 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~----~p-----~~~~~~i~~~~ 84 (111)
....++.++++.+....+ ..++++++||||+.+....... .+ ..+..+|+.+|
T Consensus 74 ~s~~~l~~~L~~L~~~~~--~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 74 FSGPALARFLRDLARAPG--IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAP 135 (233)
T ss_pred HHHHHHHHHHHHHHhccC--CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECC
Confidence 344566777777665532 4489999999999999988664 21 23566666653
No 157
>PLN02802 triacylglycerol lipase
Probab=97.15 E-value=0.001 Score=49.28 Aligned_cols=38 Identities=21% Similarity=0.245 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
++.+-++.+.+.++.....+++.|||+||.+|...+..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34444555555554333479999999999999987764
No 158
>PLN02761 lipase class 3 family protein
Probab=97.07 E-value=0.0019 Score=48.07 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhc----CCCCCEEEEeecHHHHHHHHHHH
Q 036711 33 TDYAEILLYIKEKFN----ARHSPVIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~----~~~~~~~l~GhS~GG~ia~~~~~ 70 (111)
+++.+.++.+...++ ....++++.|||+||.+|...+.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345555566655552 12347999999999999998874
No 159
>PLN02934 triacylglycerol lipase
Probab=97.07 E-value=0.0027 Score=47.11 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHH
Q 036711 35 YAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~ 70 (111)
+...++.+.++.+ +.++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p--~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHK--NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCC--CCeEEEeccccHHHHHHHHHH
Confidence 4445555555543 458999999999999998864
No 160
>PLN02753 triacylglycerol lipase
Probab=97.04 E-value=0.0023 Score=47.64 Aligned_cols=38 Identities=21% Similarity=0.224 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhcC---CCCCEEEEeecHHHHHHHHHHH
Q 036711 33 TDYAEILLYIKEKFNA---RHSPVIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~---~~~~~~l~GhS~GG~ia~~~~~ 70 (111)
+++.+.++.+...++. .+.++++.|||+||.+|...+.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3455555555555432 2358999999999999998875
No 161
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.03 E-value=0.003 Score=41.32 Aligned_cols=56 Identities=20% Similarity=0.338 Sum_probs=44.4
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC----ceeEEEEecCc
Q 036711 28 SAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH----VALGALASSAP 85 (111)
Q Consensus 28 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~----~~~~~i~~~~~ 85 (111)
-++...|+..+++....+.+ ..+++|+|.|+|+-+.-....+-|. +|..++++++.
T Consensus 47 P~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 47 PEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 35677899999999888865 3489999999999888888777776 47777777644
No 162
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.01 E-value=0.017 Score=39.98 Aligned_cols=44 Identities=14% Similarity=0.099 Sum_probs=33.0
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC-ceeEEEEecCcccccccCCCc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH-VALGALASSAPILYFDDITPQ 95 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~-~~~~~i~~~~~~~~~~~~~~~ 95 (111)
-+.++|+|.||.+...++.++|+ .++.+|.+++|..-.-+...+
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~p~c 125 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGLPFC 125 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-TCH
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccCCcc
Confidence 59999999999999999999986 499999999998777665544
No 163
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=97.00 E-value=0.0014 Score=46.66 Aligned_cols=41 Identities=20% Similarity=0.271 Sum_probs=32.2
Q ss_pred CCCCEEEEeecHHHHHHHHHHHHCCCc-----eeEEEEecCccccc
Q 036711 49 RHSPVIVIGGSYGGMLATWFRLKYPHV-----ALGALASSAPILYF 89 (111)
Q Consensus 49 ~~~~~~l~GhS~GG~ia~~~~~~~p~~-----~~~~i~~~~~~~~~ 89 (111)
...|+.|+|||+|+-+....+..-.++ |+-++++++|+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 345899999999999999887654443 78889999888653
No 164
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.99 E-value=0.0015 Score=49.70 Aligned_cols=59 Identities=22% Similarity=0.264 Sum_probs=49.1
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPIL 87 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~ 87 (111)
.+...|+.+..+++.++--.....++++|.|-||++....+...|+.+.++|+-.|.+-
T Consensus 505 ~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 505 KNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred cccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 46788999999998775433445799999999999999999999999999998776543
No 165
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.97 E-value=0.002 Score=46.80 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=49.2
Q ss_pred ccchhhhH-HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCc-eeEEEEecCcccc
Q 036711 25 YFNSAQAV-TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV-ALGALASSAPILY 88 (111)
Q Consensus 25 ~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~-~~~~i~~~~~~~~ 88 (111)
..+.++++ +++.+.++.+++..+.+ .+.++|++.||++...++..++.+ |+.+.++.+++-.
T Consensus 156 ~~~~edYi~e~l~~aid~v~~itg~~--~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 156 AKNLEDYILEGLSEAIDTVKDITGQK--DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred hccHHHHHHHHHHHHHHHHHHHhCcc--ccceeeEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 34556666 67778888887776533 799999999999999999999988 8888887777643
No 166
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.92 E-value=0.0049 Score=45.92 Aligned_cols=21 Identities=29% Similarity=0.397 Sum_probs=18.2
Q ss_pred CCEEEEeecHHHHHHHHHHHH
Q 036711 51 SPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~ 71 (111)
.++++.|||+||.+|...+..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999988753
No 167
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.89 E-value=0.0026 Score=45.32 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=32.6
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
.+...++..+++.+.++.+ ..+++|++||||..+.++...+
T Consensus 171 ~~Sr~aLe~~lr~La~~~~--~~~I~ilAHSMGtwl~~e~LrQ 211 (377)
T COG4782 171 NYSRPALERLLRYLATDKP--VKRIYLLAHSMGTWLLMEALRQ 211 (377)
T ss_pred hhhHHHHHHHHHHHHhCCC--CceEEEEEecchHHHHHHHHHH
Confidence 3555678888888877654 3379999999999999988765
No 168
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.84 E-value=0.0014 Score=48.23 Aligned_cols=57 Identities=19% Similarity=0.295 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHh---cCCCCCEEEEeecHHHHHHHHHHHH--CCCceeEEEEecCccc
Q 036711 31 AVTDYAEILLYIKEKF---NARHSPVIVIGGSYGGMLATWFRLK--YPHVALGALASSAPIL 87 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~---~~~~~~~~l~GhS~GG~ia~~~~~~--~p~~~~~~i~~~~~~~ 87 (111)
.+.|....++++++.. +.+..+|.++|+|.||..+..++.. .+..++++|+.+++..
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4678888888887654 4456689999999999999888775 2345888887776554
No 169
>PLN02719 triacylglycerol lipase
Probab=96.83 E-value=0.0041 Score=46.25 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhcC---CCCCEEEEeecHHHHHHHHHHH
Q 036711 33 TDYAEILLYIKEKFNA---RHSPVIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~---~~~~~~l~GhS~GG~ia~~~~~ 70 (111)
+++.+.++.+.+.++. ...++++.|||+||.+|...|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3455556666655532 2347999999999999998875
No 170
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.83 E-value=0.009 Score=44.62 Aligned_cols=60 Identities=22% Similarity=0.307 Sum_probs=47.8
Q ss_pred hhHHHH----HHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccc
Q 036711 30 QAVTDY----AEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFD 90 (111)
Q Consensus 30 ~~~~d~----~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~ 90 (111)
+.++|+ ..+++.+....+... +.+++|.+.||..++.++..+|+.+.-+|+.++|+.+..
T Consensus 116 QTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 116 QTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcCccCceeecCCCccccc
Confidence 445554 456666665554333 789999999999999999999999999999999998876
No 171
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.82 E-value=0.0063 Score=43.26 Aligned_cols=48 Identities=17% Similarity=0.289 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
..+.+...++.++..+ +. .|+-+.|-||||.+|...+...|..+..+-
T Consensus 157 ~~i~E~~~Ll~Wl~~~-G~--~~~g~~G~SmGG~~A~laa~~~p~pv~~vp 204 (348)
T PF09752_consen 157 ATILESRALLHWLERE-GY--GPLGLTGISMGGHMAALAASNWPRPVALVP 204 (348)
T ss_pred HHHHHHHHHHHHHHhc-CC--CceEEEEechhHhhHHhhhhcCCCceeEEE
Confidence 4566777778887776 42 389999999999999999999999876553
No 172
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.80 E-value=0.002 Score=44.76 Aligned_cols=55 Identities=22% Similarity=0.407 Sum_probs=40.6
Q ss_pred HHHHHHHHHhcC--CCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccccccc
Q 036711 37 EILLYIKEKFNA--RHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFDD 91 (111)
Q Consensus 37 ~~~~~~~~~~~~--~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~~ 91 (111)
+++-.+.+.++. ....-+|.|-|+||.+++..+..||+.+..++..|+.++....
T Consensus 161 eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~ 217 (299)
T COG2382 161 ELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPL 217 (299)
T ss_pred HhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCcc
Confidence 344444444432 2234689999999999999999999999999888877766543
No 173
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.80 E-value=0.017 Score=40.49 Aligned_cols=44 Identities=11% Similarity=0.072 Sum_probs=38.2
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC--ceeEEEEecCcccccccCCCc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH--VALGALASSAPILYFDDITPQ 95 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~--~~~~~i~~~~~~~~~~~~~~~ 95 (111)
-+.++|+|.||.++..++.+.|+ .++.+|.+++|..-......+
T Consensus 95 G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~p~C 140 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSLPRC 140 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCCCCC
Confidence 49999999999999999999997 499999999998776665444
No 174
>PLN02847 triacylglycerol lipase
Probab=96.79 E-value=0.0032 Score=47.62 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 35 YAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
+...+..+....+ +.+++++|||+||.+|..++..
T Consensus 237 i~~~L~kal~~~P--dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 237 STPCLLKALDEYP--DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHCC--CCeEEEeccChHHHHHHHHHHH
Confidence 3334444444443 4589999999999999987664
No 175
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.78 E-value=0.0075 Score=44.44 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHHHHhc---CCCCCEEEEeecHHHHHHHHHHHHC--CCceeEEEEecCcccc
Q 036711 30 QAVTDYAEILLYIKEKFN---ARHSPVIVIGGSYGGMLATWFRLKY--PHVALGALASSAPILY 88 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~---~~~~~~~l~GhS~GG~ia~~~~~~~--p~~~~~~i~~~~~~~~ 88 (111)
..+.|....++++++.+. .+..+|.|+|||-||..+...+..- ...++++|+.|++...
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 456788999999988763 3445899999999999888877652 2458999888875544
No 176
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.77 E-value=0.0036 Score=48.84 Aligned_cols=55 Identities=24% Similarity=0.193 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEE-EEecC
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGA-LASSA 84 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~-i~~~~ 84 (111)
..++|....++.+.+....+..++.++|+|+||.+++..+...|..+-++ |..+|
T Consensus 587 ~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaP 642 (755)
T KOG2100|consen 587 VEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAP 642 (755)
T ss_pred cchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecc
Confidence 35677777777777766566678999999999999999999999665444 66553
No 177
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=96.73 E-value=0.0022 Score=46.11 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEec
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASS 83 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~ 83 (111)
|....++++...-.+++.+|-++|+||||..++.++...+ +|++.|..+
T Consensus 209 ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~ 257 (390)
T PF12715_consen 209 DDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANG 257 (390)
T ss_dssp HHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES
T ss_pred HHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhh
Confidence 4444566665554455668999999999999999998866 455555443
No 178
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.69 E-value=0.0073 Score=43.93 Aligned_cols=60 Identities=13% Similarity=0.083 Sum_probs=40.2
Q ss_pred cccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHC-----CCceeEEEEecCcccccc
Q 036711 24 GYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKY-----PHVALGALASSAPILYFD 90 (111)
Q Consensus 24 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~-----p~~~~~~i~~~~~~~~~~ 90 (111)
+.++.+.+++-+.++++.+ + .++.++|.|+||..++.++... |..++.++++++|+-...
T Consensus 148 ~~f~ldDYi~~l~~~i~~~----G---~~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 148 GKFDLEDYIDYLIEFIRFL----G---PDIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred CCCCHHHHHHHHHHHHHHh----C---CCCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 4445555554344444333 2 2489999999999977665544 667999999998886543
No 179
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=96.53 E-value=0.0032 Score=45.68 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC---ceeEEEEecCccccc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH---VALGALASSAPILYF 89 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~---~~~~~i~~~~~~~~~ 89 (111)
-...|+.+.++.+.+..+ ..+++.+|||.|+.+...++...|+ .|+..++++|.++..
T Consensus 142 m~~yDLPA~IdyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 142 MGTYDLPAMIDYILEKTG--QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred hhhcCHHHHHHHHHHhcc--ccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 355799999999988764 3489999999999999999888776 588888888877554
No 180
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=96.50 E-value=0.0089 Score=41.51 Aligned_cols=58 Identities=21% Similarity=0.221 Sum_probs=41.7
Q ss_pred hhhhHHHHHHHHHHHHHH---hcCCCCCEEEEeecHHHHHHHHHHHHCCC----ceeEEEEecCc
Q 036711 28 SAQAVTDYAEILLYIKEK---FNARHSPVIVIGGSYGGMLATWFRLKYPH----VALGALASSAP 85 (111)
Q Consensus 28 ~~~~~~d~~~~~~~~~~~---~~~~~~~~~l~GhS~GG~ia~~~~~~~p~----~~~~~i~~~~~ 85 (111)
....++|..+.+.++.++ ++.+..++.++|+|-||.+++.++..-.+ .....+++++.
T Consensus 126 ~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 126 FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 345667777777777654 34556689999999999999999886554 34566666644
No 181
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.49 E-value=0.0071 Score=45.53 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
+.++|-.+.|+++..+ +.-+.+|-.+|-|++|+..+.+|...|..+++++-..+..
T Consensus 104 ~E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 104 REAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred ccccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccc
Confidence 4677888888888764 3345689999999999999999999999888887666544
No 182
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=96.46 E-value=0.007 Score=42.93 Aligned_cols=37 Identities=27% Similarity=0.339 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
..+.+.++.+...++ +..+++.|||+||.+|...+..
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 456666666666665 5589999999999999887753
No 183
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.39 E-value=0.00021 Score=47.60 Aligned_cols=37 Identities=27% Similarity=0.134 Sum_probs=29.8
Q ss_pred cCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEec
Q 036711 47 NARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASS 83 (111)
Q Consensus 47 ~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~ 83 (111)
+.+..++-++||||||.=|+..+.+.|...+.+-+.+
T Consensus 137 pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFA 173 (283)
T KOG3101|consen 137 PLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFA 173 (283)
T ss_pred cccchhcceeccccCCCceEEEEEcCcccccceeccc
Confidence 3445578999999999999999999999877765544
No 184
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.37 E-value=0.0087 Score=41.23 Aligned_cols=55 Identities=20% Similarity=0.264 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHHHHHhc--------CCCCCEEEEeecHHHHHHHHHHHHCCCc--eeEEEEec
Q 036711 29 AQAVTDYAEILLYIKEKFN--------ARHSPVIVIGGSYGGMLATWFRLKYPHV--ALGALASS 83 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~--------~~~~~~~l~GhS~GG~ia~~~~~~~p~~--~~~~i~~~ 83 (111)
...+++..++++++...+. .+-.++.++|||+||-.|..+|..+... +.++|-+.
T Consensus 90 ~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiD 154 (307)
T PF07224_consen 90 QDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGID 154 (307)
T ss_pred hHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheeccc
Confidence 3456677777777765431 1233799999999999999999987532 66666665
No 185
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.28 E-value=0.012 Score=43.67 Aligned_cols=55 Identities=22% Similarity=0.229 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 32 VTDYAEILLYIKEKF-NARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~-~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
+.+...+-+.+.+.+ +.....-+..|.|-||--++..+++||+.++|+|+.+|.+
T Consensus 95 ~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 95 LHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 344444455555443 3334468899999999999999999999999998876544
No 186
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.28 E-value=0.026 Score=38.70 Aligned_cols=42 Identities=14% Similarity=0.137 Sum_probs=30.1
Q ss_pred hcCCCCCEEEEeecHHHHHHHHHHHHCCC--ceeEEEEecCccc
Q 036711 46 FNARHSPVIVIGGSYGGMLATWFRLKYPH--VALGALASSAPIL 87 (111)
Q Consensus 46 ~~~~~~~~~l~GhS~GG~ia~~~~~~~p~--~~~~~i~~~~~~~ 87 (111)
+-+++.+++++|||.|+.+.+.+...... .+.+++++-|.+.
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIE 148 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHH
Confidence 33456799999999999999998863222 3666666665553
No 187
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.23 E-value=0.0061 Score=39.53 Aligned_cols=35 Identities=31% Similarity=0.369 Sum_probs=31.8
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
..++-|.||||..++.+..++|+.+.++|.+++..
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 57889999999999999999999999999988655
No 188
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.21 E-value=0.043 Score=39.34 Aligned_cols=64 Identities=27% Similarity=0.300 Sum_probs=45.3
Q ss_pred ccchhhhHHHHHHHHHHHHHHhcC-CCCCEEEEeecHHHHHHHHHHH----HC------CCceeEEEEecCcccc
Q 036711 25 YFNSAQAVTDYAEILLYIKEKFNA-RHSPVIVIGGSYGGMLATWFRL----KY------PHVALGALASSAPILY 88 (111)
Q Consensus 25 ~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~GhS~GG~ia~~~~~----~~------p~~~~~~i~~~~~~~~ 88 (111)
..+.++.++|+.++++.+...++. ...|++|.|.|+||..+-.++. .. +-.++|+++-++.+.+
T Consensus 109 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 109 VWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp S-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred cchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 345678889999999998887764 4459999999999987655544 33 2347888877755543
No 189
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.15 E-value=0.023 Score=38.69 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=27.6
Q ss_pred CCEEEEeecHHHHHHHHHHHHCCCceeEEEEec
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYPHVALGALASS 83 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~ 83 (111)
.|++-+|||||+-+-+.+...++...++.|+++
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 588999999999999999988877666666665
No 190
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=96.13 E-value=0.0066 Score=40.51 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=43.1
Q ss_pred chhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH-CCCceeEEEEecCc
Q 036711 27 NSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK-YPHVALGALASSAP 85 (111)
Q Consensus 27 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~-~p~~~~~~i~~~~~ 85 (111)
+.++.+.+....++.+.+..+. ...+.+-|||.|+.+++....+ +..+|.+++++++.
T Consensus 113 tL~qt~~~~~~gv~filk~~~n-~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~Gv 171 (270)
T KOG4627|consen 113 TLEQTMTQFTHGVNFILKYTEN-TKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGV 171 (270)
T ss_pred cHHHHHHHHHHHHHHHHHhccc-ceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhH
Confidence 4567788888888887766542 2357788999999999988665 55678898877643
No 191
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.09 E-value=0.023 Score=43.09 Aligned_cols=55 Identities=27% Similarity=0.327 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH-----CCC------ceeEEEEecCcccc
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK-----YPH------VALGALASSAPILY 88 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~-----~p~------~~~~~i~~~~~~~~ 88 (111)
-..++++++...--.++.|++.+||||||.++-.++.. .|+ ...|+|+.+.|...
T Consensus 509 Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 509 RSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred HHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 34455665554332346799999999999998877654 233 25678888877643
No 192
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=96.08 E-value=0.01 Score=41.40 Aligned_cols=40 Identities=18% Similarity=0.395 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
.+..+++..+++.++ +..+.+.|||+||.+|..+..++.-
T Consensus 260 Sa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fgl 299 (425)
T KOG4540|consen 260 SAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFGL 299 (425)
T ss_pred HHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccCC
Confidence 344555555666554 4589999999999999999887763
No 193
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=96.08 E-value=0.01 Score=41.40 Aligned_cols=40 Identities=18% Similarity=0.395 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
.+..+++..+++.++ +..+.+.|||+||.+|..+..++.-
T Consensus 260 Sa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fgl 299 (425)
T COG5153 260 SAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFGL 299 (425)
T ss_pred HHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccCC
Confidence 344555555666554 4589999999999999999887763
No 194
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=95.99 E-value=0.0036 Score=44.10 Aligned_cols=39 Identities=26% Similarity=0.195 Sum_probs=31.0
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEecCccccccc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFDD 91 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~~ 91 (111)
++.++|||+||+.++.....+ .+++..|+..+.+++.+.
T Consensus 242 ~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM~Pl~~ 280 (399)
T KOG3847|consen 242 QAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWMFPLDQ 280 (399)
T ss_pred hhhheeccccchhhhhhhccc-cceeeeeeeeeeecccch
Confidence 588999999999988877654 457777888888887665
No 195
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.90 E-value=0.031 Score=37.54 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=31.7
Q ss_pred CCCEEEEeecHHHHHHHHHHHHCCCc--eeEEEEecCcccc
Q 036711 50 HSPVIVIGGSYGGMLATWFRLKYPHV--ALGALASSAPILY 88 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~~p~~--~~~~i~~~~~~~~ 88 (111)
...++++.||+||...+.+..++|+. +.++.+..+++..
T Consensus 189 ~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 189 AESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred cceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 44799999999999999999999975 6677676666543
No 196
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.60 E-value=0.084 Score=37.10 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=30.0
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCc-eeEEEEecCcc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHV-ALGALASSAPI 86 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~-~~~~i~~~~~~ 86 (111)
+++|+||+.|+.++..+....+.. ++++|++++..
T Consensus 194 ~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 194 NIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred eEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 499999999999999999887754 89999888544
No 197
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=95.57 E-value=0.014 Score=32.79 Aligned_cols=27 Identities=26% Similarity=0.301 Sum_probs=19.1
Q ss_pred CCcccCCCCCCchhhhhccccccccc-chhhhHHHHHHHH
Q 036711 1 HRYYGKSIPFGSREEALKNASTLGYF-NSAQAVTDYAEIL 39 (111)
Q Consensus 1 hrg~G~S~p~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~ 39 (111)
|||||+|.. .+++. +.+..++|+..++
T Consensus 51 ~rGhG~S~g------------~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 51 HRGHGRSEG------------KRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCcCCCCCC------------cccccCCHHHHHHHHHHHh
Confidence 799999974 33443 4567778888775
No 198
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.54 E-value=0.022 Score=38.46 Aligned_cols=64 Identities=19% Similarity=0.181 Sum_probs=44.4
Q ss_pred cccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHH--CCCceeEEEEecCcccc
Q 036711 22 TLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLK--YPHVALGALASSAPILY 88 (111)
Q Consensus 22 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~--~p~~~~~~i~~~~~~~~ 88 (111)
.++..+..+..+|+..+++++...- ....++|+|||-|+.-.++|+.. .|..+.+.|+.+ |+..
T Consensus 80 G~Gt~slk~D~edl~~l~~Hi~~~~--fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqA-pVSD 145 (299)
T KOG4840|consen 80 GYGTFSLKDDVEDLKCLLEHIQLCG--FSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQA-PVSD 145 (299)
T ss_pred ccccccccccHHHHHHHHHHhhccC--cccceEEEecCccchHHHHHHHhccchHHHHHHHHhC-ccch
Confidence 3556667788999999999776432 13379999999999999999832 333355555544 5443
No 199
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.49 E-value=0.044 Score=39.64 Aligned_cols=46 Identities=17% Similarity=0.387 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
...+.+++.+.-+++.+ +.++-|..||+.|+..++..||+.|.|+=
T Consensus 213 ~a~ArvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 213 AATARVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred HHHHHHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 45566677777777654 89999999999999999999999998873
No 200
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=95.46 E-value=0.069 Score=35.27 Aligned_cols=36 Identities=22% Similarity=-0.130 Sum_probs=22.0
Q ss_pred EEEEeecHHHHHHHHHHHHC--------CCceeEEEEecCcccc
Q 036711 53 VIVIGGSYGGMLATWFRLKY--------PHVALGALASSAPILY 88 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~--------p~~~~~~i~~~~~~~~ 88 (111)
.-|+|+|.||.+|..++... ...++-+|++++....
T Consensus 104 dGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 104 DGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred EEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 45999999999999887532 2246777777765543
No 201
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=95.19 E-value=0.22 Score=33.50 Aligned_cols=40 Identities=23% Similarity=0.222 Sum_probs=28.2
Q ss_pred CCCCEEEEeecHHHHHHHHHHHHCCC------ceeEEEEecCcccc
Q 036711 49 RHSPVIVIGGSYGGMLATWFRLKYPH------VALGALASSAPILY 88 (111)
Q Consensus 49 ~~~~~~l~GhS~GG~ia~~~~~~~p~------~~~~~i~~~~~~~~ 88 (111)
.+.+++++|+|+|+.++...+.+.-. .....|+.+-|..+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~rp 91 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPRRP 91 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCCCC
Confidence 35689999999999999988765322 12345666666554
No 202
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.95 E-value=0.13 Score=37.81 Aligned_cols=57 Identities=21% Similarity=0.277 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHHHHHHhcC-CCCCEEEEeecHHHHHHHHHHHH----C------CCceeEEEEecCc
Q 036711 29 AQAVTDYAEILLYIKEKFNA-RHSPVIVIGGSYGGMLATWFRLK----Y------PHVALGALASSAP 85 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~-~~~~~~l~GhS~GG~ia~~~~~~----~------p~~~~~~i~~~~~ 85 (111)
...++|+.++++.+....+. ...+++|.|.|+||..+-.++.. . +-.++|+++-++.
T Consensus 142 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 142 ISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred HHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCC
Confidence 34457888888887766553 45689999999999865555442 2 1246788776653
No 203
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=94.94 E-value=0.023 Score=43.37 Aligned_cols=56 Identities=21% Similarity=0.280 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecC
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSA 84 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~ 84 (111)
.+.++|+.+-++++.++--....+..+.|.|-||.++......+|+.+.++|+-.+
T Consensus 527 qN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vp 582 (712)
T KOG2237|consen 527 QNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVP 582 (712)
T ss_pred cccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCc
Confidence 35678999888888876434455899999999999999999999999988876553
No 204
>PLN02209 serine carboxypeptidase
Probab=94.85 E-value=0.15 Score=37.53 Aligned_cols=59 Identities=22% Similarity=0.244 Sum_probs=39.3
Q ss_pred hhhhHHHHHHHHHHHHHHhcC-CCCCEEEEeecHHHHHHHHHHH----HC------CCceeEEEEecCcc
Q 036711 28 SAQAVTDYAEILLYIKEKFNA-RHSPVIVIGGSYGGMLATWFRL----KY------PHVALGALASSAPI 86 (111)
Q Consensus 28 ~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~GhS~GG~ia~~~~~----~~------p~~~~~~i~~~~~~ 86 (111)
....++|+.++++.+....+. ...|++|.|.|+||.-+-.++. .. +-.++|+++.++..
T Consensus 143 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 143 DTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred CHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 345568888888887776653 3458999999999975554443 22 12367877766533
No 205
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.54 E-value=0.27 Score=34.61 Aligned_cols=60 Identities=20% Similarity=0.265 Sum_probs=40.6
Q ss_pred chhhhHHHHHHHHHHHHHHhcC-CCCCEEEEeecHHHHHHHHHHHH----C------CCceeEEEEecCcc
Q 036711 27 NSAQAVTDYAEILLYIKEKFNA-RHSPVIVIGGSYGGMLATWFRLK----Y------PHVALGALASSAPI 86 (111)
Q Consensus 27 ~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~GhS~GG~ia~~~~~~----~------p~~~~~~i~~~~~~ 86 (111)
+....++|+..+++.+...++. .+.+++|.|-|+||.-+-.++.. . +-.++|+++-++..
T Consensus 26 ~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t 96 (319)
T PLN02213 26 GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 96 (319)
T ss_pred ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCC
Confidence 3344558888888888777653 46699999999999755555442 2 11467877666444
No 206
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.47 E-value=0.04 Score=40.87 Aligned_cols=57 Identities=18% Similarity=0.179 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHHh---cCCCCCEEEEeecHHHHHHHHHHHHCCC---ceeEEEEecCccc
Q 036711 30 QAVTDYAEILLYIKEKF---NARHSPVIVIGGSYGGMLATWFRLKYPH---VALGALASSAPIL 87 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~---~~~~~~~~l~GhS~GG~ia~~~~~~~p~---~~~~~i~~~~~~~ 87 (111)
-.+.|+...++++++++ +-+...|.|+|+|-|++.++.++. .|. .++++|+.|++..
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 35678888888887754 446668999999999999888775 354 3677777776654
No 207
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=94.27 E-value=0.51 Score=32.79 Aligned_cols=53 Identities=13% Similarity=0.104 Sum_probs=41.8
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCc-eeEEEEecCcccccccCCCchh--hHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHV-ALGALASSAPILYFDDITPQNG--YYSIVTR 104 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~-~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~ 104 (111)
-+.++|-|.||+++..++...++. +..+|-+++|.........+.. |.+.+.+
T Consensus 93 Gynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p~c~~~l~c~~~~~ 148 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIPRCLKWLFCDLMRS 148 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCCCCCchhhhHHHHH
Confidence 599999999999999999987764 8888999999888777655443 5554443
No 208
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=94.25 E-value=0.2 Score=33.23 Aligned_cols=37 Identities=32% Similarity=0.343 Sum_probs=30.6
Q ss_pred CCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 49 RHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 49 ~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
+..++++-|.||||+++++.+..+|..+.+++..++-
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred CccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 3446899999999999999999998888887665543
No 209
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=94.21 E-value=0.26 Score=34.28 Aligned_cols=57 Identities=25% Similarity=0.306 Sum_probs=32.6
Q ss_pred hhhHHHHHHHHHHHHHHh---cC-CCCCEEEEeecHHHHHHHHHHHH---C-CCc---eeEEEEecCc
Q 036711 29 AQAVTDYAEILLYIKEKF---NA-RHSPVIVIGGSYGGMLATWFRLK---Y-PHV---ALGALASSAP 85 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~---~~-~~~~~~l~GhS~GG~ia~~~~~~---~-p~~---~~~~i~~~~~ 85 (111)
......+.+.++..++.. +. .+.++.++|||-||.-+.+.+.. | |+. +.+.++.++|
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApeL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPELNRDLVGAAAGGPP 112 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcccccceeEEeccCCc
Confidence 333344445555544322 11 24589999999999888776643 3 332 4555555543
No 210
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=93.77 E-value=0.28 Score=32.81 Aligned_cols=39 Identities=21% Similarity=0.119 Sum_probs=29.1
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccccccC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILYFDDI 92 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~~~~~ 92 (111)
.+.|+++|||-.+|..+....| ++..|++++...+.++.
T Consensus 58 ~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~Pid~~ 96 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYPIDDE 96 (213)
T ss_pred eEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCCcCCC
Confidence 7999999999999988876544 55556666666666654
No 211
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=93.61 E-value=0.59 Score=33.40 Aligned_cols=58 Identities=21% Similarity=0.151 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHH----hcCCCCCEEEEeecHHHHHHHHHHHHCC------CceeEEEEecCcccc
Q 036711 31 AVTDYAEILLYIKEK----FNARHSPVIVIGGSYGGMLATWFRLKYP------HVALGALASSAPILY 88 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~----~~~~~~~~~l~GhS~GG~ia~~~~~~~p------~~~~~~i~~~~~~~~ 88 (111)
..+|..+.+.++.++ .+.+..+++|+|-|-||-+|..++++.- ..+++.|++-|....
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 345555555555442 3445568999999999999999988633 458899998855544
No 212
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=93.59 E-value=0.31 Score=35.30 Aligned_cols=59 Identities=20% Similarity=0.214 Sum_probs=42.1
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCC--C---ceeEEEEecCccccc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYP--H---VALGALASSAPILYF 89 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p--~---~~~~~i~~~~~~~~~ 89 (111)
...+.++.+..+++.+..+ ...++|+|-|-||-+++.+++.-. + .-+++|++||.+...
T Consensus 175 PtQL~qlv~~Y~~Lv~~~G--~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 175 PTQLRQLVATYDYLVESEG--NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred chHHHHHHHHHHHHHhccC--CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 4556677777777775544 348999999999999998876421 1 247889999766554
No 213
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.20 E-value=0.067 Score=37.17 Aligned_cols=56 Identities=20% Similarity=0.106 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
....|+...++.+..-...+..++.+.|.|.||.+++..+...| +++++++.-+.+
T Consensus 155 ~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl 210 (321)
T COG3458 155 GVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFL 210 (321)
T ss_pred eehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccc
Confidence 44567777777776554556678999999999999999988766 566665544433
No 214
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=93.18 E-value=0.2 Score=37.50 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHh---cCCCCCEEEEeecHHHHHHHHHHHH--CCCceeEEEEecCcccc
Q 036711 33 TDYAEILLYIKEKF---NARHSPVIVIGGSYGGMLATWFRLK--YPHVALGALASSAPILY 88 (111)
Q Consensus 33 ~d~~~~~~~~~~~~---~~~~~~~~l~GhS~GG~ia~~~~~~--~p~~~~~~i~~~~~~~~ 88 (111)
.|+...+++++..+ +.+..++.++|||.||..+..+... ....+..+|..++....
T Consensus 174 ~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 174 FDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 47777777777654 3455689999999999988777652 22346666666655544
No 215
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=92.77 E-value=0.16 Score=36.56 Aligned_cols=46 Identities=20% Similarity=0.130 Sum_probs=32.3
Q ss_pred hhhHHHHHHHHHHHHHH-----hc--CCCCCEEEEeecHHHHHHHHHHHHCCC
Q 036711 29 AQAVTDYAEILLYIKEK-----FN--ARHSPVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~-----~~--~~~~~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
+.-..|+..++..+... +. .+..+|-++|||+||..++..+--..+
T Consensus 130 ~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 130 WERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 34456777777776655 21 234589999999999999988755444
No 216
>COG3150 Predicted esterase [General function prediction only]
Probab=92.54 E-value=0.47 Score=30.78 Aligned_cols=51 Identities=16% Similarity=0.266 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcccc
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPILY 88 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~~~ 88 (111)
+...+.++.+..+.. +....++|-|+||..+.+++.++. +..+ +.++.+.+
T Consensus 43 ~~a~~ele~~i~~~~--~~~p~ivGssLGGY~At~l~~~~G--irav-~~NPav~P 93 (191)
T COG3150 43 QQALKELEKAVQELG--DESPLIVGSSLGGYYATWLGFLCG--IRAV-VFNPAVRP 93 (191)
T ss_pred HHHHHHHHHHHHHcC--CCCceEEeecchHHHHHHHHHHhC--Chhh-hcCCCcCc
Confidence 344444444444443 224789999999999999998876 3333 34555544
No 217
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=90.88 E-value=0.39 Score=36.96 Aligned_cols=65 Identities=18% Similarity=0.214 Sum_probs=43.2
Q ss_pred chhhhHHHHHHHHHHHHHHh--cCCCCCEEEEeecHHHHHHHHHHHHCC-CceeEEEEecCccccccc
Q 036711 27 NSAQAVTDYAEILLYIKEKF--NARHSPVIVIGGSYGGMLATWFRLKYP-HVALGALASSAPILYFDD 91 (111)
Q Consensus 27 ~~~~~~~d~~~~~~~~~~~~--~~~~~~~~l~GhS~GG~ia~~~~~~~p-~~~~~~i~~~~~~~~~~~ 91 (111)
+..+.++-+..+.+....++ ..+..+++|+|.|||+.++.+...-.. ..|+++|+++-|......
T Consensus 224 nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg 291 (784)
T KOG3253|consen 224 NIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG 291 (784)
T ss_pred chHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc
Confidence 34455555555555433332 123558999999999999988876544 458999999877655443
No 218
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=90.17 E-value=0.59 Score=35.00 Aligned_cols=63 Identities=24% Similarity=0.238 Sum_probs=39.0
Q ss_pred hhhhHHHHHHHHHHHHHHhcC---CCCCEEEEeecHHHHHHHHHHHHCCC---ceeEEEEecCcccccc
Q 036711 28 SAQAVTDYAEILLYIKEKFNA---RHSPVIVIGGSYGGMLATWFRLKYPH---VALGALASSAPILYFD 90 (111)
Q Consensus 28 ~~~~~~d~~~~~~~~~~~~~~---~~~~~~l~GhS~GG~ia~~~~~~~p~---~~~~~i~~~~~~~~~~ 90 (111)
.+..-+|+..+.+.+.+.++. ...|.+|+|-|+||.-+..+|..--+ ..+++|+.++.+....
T Consensus 172 ~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 172 FEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred hhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 344445666666665554421 12389999999999988888765333 3556666665554433
No 219
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.94 E-value=0.86 Score=34.50 Aligned_cols=43 Identities=19% Similarity=0.187 Sum_probs=32.6
Q ss_pred CCCEEEEeecHHHHHHHHHHHH-----CCCceeEEEEecCcccccccC
Q 036711 50 HSPVIVIGGSYGGMLATWFRLK-----YPHVALGALASSAPILYFDDI 92 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~-----~p~~~~~~i~~~~~~~~~~~~ 92 (111)
..|+.|+|.|+|+-+....... .-..|.-+|++++|+...++.
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~ 493 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKL 493 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHH
Confidence 4599999999999998866542 223478889999998765553
No 220
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=88.77 E-value=1.1 Score=32.04 Aligned_cols=72 Identities=21% Similarity=0.214 Sum_probs=47.3
Q ss_pred hhhHHHHHHHHHHHHHHhcC-CCCCEEEEeecHHHHHHHHHHHHCCC---------ceeEEEEecCcccccccCCCchhh
Q 036711 29 AQAVTDYAEILLYIKEKFNA-RHSPVIVIGGSYGGMLATWFRLKYPH---------VALGALASSAPILYFDDITPQNGY 98 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~-~~~~~~l~GhS~GG~ia~~~~~~~p~---------~~~~~i~~~~~~~~~~~~~~~~~~ 98 (111)
.+...|+.++++.+....+. +..|++++-.|+||-++..++...-+ .+.++++-.+.+.+.+-...+.-|
T Consensus 99 ~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D~V~SWGP~ 178 (414)
T KOG1283|consen 99 KQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPEDFVFSWGPL 178 (414)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhHhhhcchHH
Confidence 46668999999988765543 45699999999999999887754222 245666655555544444333333
Q ss_pred HH
Q 036711 99 YS 100 (111)
Q Consensus 99 ~~ 100 (111)
+.
T Consensus 179 L~ 180 (414)
T KOG1283|consen 179 LK 180 (414)
T ss_pred HH
Confidence 33
No 221
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=87.93 E-value=0.2 Score=33.82 Aligned_cols=50 Identities=14% Similarity=0.204 Sum_probs=38.7
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
.....|+..+++.++..- ...++=++|..|||-++..+..+.| .+.+.+.
T Consensus 100 ~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~ 149 (242)
T KOG3043|consen 100 PKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVS 149 (242)
T ss_pred ccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEEEEeeccch-hheeeeE
Confidence 455679999999998553 2347899999999999999999888 4544443
No 222
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=87.86 E-value=0.62 Score=34.88 Aligned_cols=47 Identities=17% Similarity=0.189 Sum_probs=35.9
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC
Q 036711 28 SAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 28 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
.+..-+.+.+.++...+.++.+...++|-|-|||..=|+.++.+...
T Consensus 334 s~eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P 380 (511)
T TIGR03712 334 SDEYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSP 380 (511)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCC
Confidence 34444567777777777777666689999999999999999886443
No 223
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.51 E-value=1.3 Score=31.03 Aligned_cols=28 Identities=21% Similarity=0.184 Sum_probs=24.7
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
+..++|-||||.++......++..|..+
T Consensus 196 ~~~~~g~Smgg~~a~~vgS~~q~Pva~~ 223 (371)
T KOG1551|consen 196 NLNLVGRSMGGDIANQVGSLHQKPVATA 223 (371)
T ss_pred cceeeeeecccHHHHhhcccCCCCcccc
Confidence 8999999999999999999888776655
No 224
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=87.06 E-value=1.9 Score=31.82 Aligned_cols=46 Identities=17% Similarity=0.400 Sum_probs=35.3
Q ss_pred chhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC
Q 036711 27 NSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 27 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
+-++..+|+..+++....+.+ ..+++|+|.|+|+=+.=..-.+-|.
T Consensus 304 tPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 304 TPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred CHHHHHHHHHHHHHHHHHhhC--cceEEEEeecccchhhHHHHHhCCH
Confidence 345677899999999888765 4489999999999776665555554
No 225
>PF03283 PAE: Pectinacetylesterase
Probab=87.06 E-value=8.7 Score=27.79 Aligned_cols=54 Identities=17% Similarity=0.149 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHH-hcCCCCCEEEEeecHHHHHHHHHH----HHCCCceeEEEEecCccc
Q 036711 33 TDYAEILLYIKEK-FNARHSPVIVIGGSYGGMLATWFR----LKYPHVALGALASSAPIL 87 (111)
Q Consensus 33 ~d~~~~~~~~~~~-~~~~~~~~~l~GhS~GG~ia~~~~----~~~p~~~~~~i~~~~~~~ 87 (111)
..+.++++++... ++ +...++|.|.|-||.=+...+ ...|..++...+..+.++
T Consensus 138 ~i~~avl~~l~~~gl~-~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLP-NAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred HHHHHHHHHHHHhcCc-ccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 3455667776665 32 234799999999998777643 457755444444444333
No 226
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=85.32 E-value=7.7 Score=29.02 Aligned_cols=61 Identities=21% Similarity=0.151 Sum_probs=41.7
Q ss_pred cchhhhHHHHHHHHHHHHHHhcC-CCCCEEEEeecHHHH----HHHHHHHHCC------CceeEEEEecCcc
Q 036711 26 FNSAQAVTDYAEILLYIKEKFNA-RHSPVIVIGGSYGGM----LATWFRLKYP------HVALGALASSAPI 86 (111)
Q Consensus 26 ~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~GhS~GG~----ia~~~~~~~p------~~~~~~i~~~~~~ 86 (111)
.+.+..++|..+++....++++. ...+++|.|-|++|. +|........ -.++|+++-++..
T Consensus 142 ~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 142 TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 34567788998888888777654 456899999999994 4455444432 2367877655444
No 227
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=84.65 E-value=1.6 Score=27.74 Aligned_cols=42 Identities=14% Similarity=0.260 Sum_probs=23.7
Q ss_pred cccccchhhhHHHHHHHHHHHHHHhcC--CCCCEEEEeecHHHH
Q 036711 22 TLGYFNSAQAVTDYAEILLYIKEKFNA--RHSPVIVIGGSYGGM 63 (111)
Q Consensus 22 ~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~l~GhS~GG~ 63 (111)
.+...+....+.-+..+-..++..+.. ...++.|+|+||+..
T Consensus 73 ~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 73 TLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 344444444444454444777766532 234799999999987
No 228
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=83.05 E-value=0.18 Score=38.45 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCcc
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAPI 86 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~~ 86 (111)
.+..+|+.++.+.+..+--....++-+.|.|=||++....+.++|+.+.++|+-. |+
T Consensus 478 q~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ev-Pl 534 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEV-PL 534 (648)
T ss_pred hhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeecc-ch
Confidence 4566899999999987632233478899999999999999999999988776544 44
No 229
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=82.40 E-value=8.5 Score=32.82 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=33.5
Q ss_pred hhHHHHHHH-HHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCC--ceeEEEEe-cCcc
Q 036711 30 QAVTDYAEI-LLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPH--VALGALAS-SAPI 86 (111)
Q Consensus 30 ~~~~d~~~~-~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~--~~~~~i~~-~~~~ 86 (111)
..++++.+. +++++.-. +..|..++|.|+|+.++..++..-.+ ....+|++ ++|.
T Consensus 2162 dSies~A~~yirqirkvQ--P~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2162 DSIESLAAYYIRQIRKVQ--PEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred chHHHHHHHHHHHHHhcC--CCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 344554433 44444322 23499999999999999999875433 23445555 4444
No 230
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=81.98 E-value=8.5 Score=25.63 Aligned_cols=38 Identities=21% Similarity=0.133 Sum_probs=27.2
Q ss_pred CEEEEeecHHHHHHHHHHHH---------CC-CceeEEEEecCccccc
Q 036711 52 PVIVIGGSYGGMLATWFRLK---------YP-HVALGALASSAPILYF 89 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~---------~p-~~~~~~i~~~~~~~~~ 89 (111)
++++-..|.||......... .+ +.++++|+-|+|....
T Consensus 68 ~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~ 115 (240)
T PF05705_consen 68 PILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPT 115 (240)
T ss_pred CEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccc
Confidence 89999999988777766441 11 1278999988886543
No 231
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=81.65 E-value=3.5 Score=28.52 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHC
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~ 72 (111)
+.+......+...+.. ...++++|.|-|+.+|..++..-
T Consensus 75 ~~I~~ay~~l~~~~~~-gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 75 ARIRDAYRFLSKNYEP-GDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHHHHHHHhccCC-cceEEEEecCccHHHHHHHHHHH
Confidence 3445555556555533 34799999999999999998653
No 232
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=76.60 E-value=3.4 Score=28.96 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=34.1
Q ss_pred HHHHHHHHHH---HhcCC-CCCEEEEeecHHHHHHHHHHHH---CCCceeEEEEecCcccc
Q 036711 35 YAEILLYIKE---KFNAR-HSPVIVIGGSYGGMLATWFRLK---YPHVALGALASSAPILY 88 (111)
Q Consensus 35 ~~~~~~~~~~---~~~~~-~~~~~l~GhS~GG~ia~~~~~~---~p~~~~~~i~~~~~~~~ 88 (111)
-.++++.+.. .++.+ .-++++.|-|+|++-+...... .-+.+++.+..++|.+.
T Consensus 89 ~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 89 ARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 3444555443 33332 2369999999998776655433 33458899988877654
No 233
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=76.12 E-value=6.8 Score=27.64 Aligned_cols=21 Identities=29% Similarity=0.251 Sum_probs=17.8
Q ss_pred EEEEeecHHHHHHHHHHHHCC
Q 036711 53 VIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p 73 (111)
=++.|-|+||.+++.++..++
T Consensus 34 D~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 34 DWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred cEEEeeChHHHHHHHHHcCCC
Confidence 468999999999999997544
No 234
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=71.04 E-value=8.4 Score=26.42 Aligned_cols=18 Identities=33% Similarity=0.584 Sum_probs=15.5
Q ss_pred CEEEEeecHHHHHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFR 69 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~ 69 (111)
|-.++|||+|-..|+..+
T Consensus 83 p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 83 PDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred ccEEEecCHHHHHHHHHh
Confidence 789999999998887765
No 235
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=70.67 E-value=7.8 Score=26.45 Aligned_cols=18 Identities=28% Similarity=0.215 Sum_probs=15.6
Q ss_pred CEEEEeecHHHHHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFR 69 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~ 69 (111)
|-.++|||+|=..++..+
T Consensus 84 p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 84 PDFAAGHSLGEYSALVAA 101 (290)
T ss_pred CCEEeecCHHHHHHHHHh
Confidence 789999999998887765
No 236
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=70.26 E-value=12 Score=25.82 Aligned_cols=19 Identities=32% Similarity=0.286 Sum_probs=16.1
Q ss_pred CCEEEEeecHHHHHHHHHH
Q 036711 51 SPVIVIGGSYGGMLATWFR 69 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~ 69 (111)
.|..++|||+|=..++..+
T Consensus 76 ~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred CCcEEeecCHHHHHHHHHh
Confidence 4889999999998887765
No 237
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=69.57 E-value=4.5 Score=28.32 Aligned_cols=18 Identities=39% Similarity=0.348 Sum_probs=15.1
Q ss_pred CEEEEeecHHHHHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFR 69 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~ 69 (111)
|-.++|||+|=..|+..+
T Consensus 85 P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 85 PDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp ESEEEESTTHHHHHHHHT
T ss_pred cceeeccchhhHHHHHHC
Confidence 789999999988777654
No 238
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=68.42 E-value=32 Score=24.15 Aligned_cols=45 Identities=29% Similarity=0.401 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcCCC-CCEEEEeecHHHHHHHHHHHHCCCceeEEEEe
Q 036711 37 EILLYIKEKFNARH-SPVIVIGGSYGGMLATWFRLKYPHVALGALAS 82 (111)
Q Consensus 37 ~~~~~~~~~~~~~~-~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~ 82 (111)
..++.+.+.+..++ ..+.=+|..||+ ++..+|.+|...+.|+-++
T Consensus 59 ~k~~~~~~kl~L~~G~~lLDiGCGWG~-l~~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 59 AKLDLILEKLGLKPGMTLLDIGCGWGG-LAIYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCChhH-HHHHHHHHcCCEEEEeeCC
Confidence 44555555555543 345559999999 5667777887677776543
No 239
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=67.98 E-value=10 Score=29.06 Aligned_cols=25 Identities=20% Similarity=0.072 Sum_probs=18.8
Q ss_pred HhcCCCCCEEEEeecHHHHHHHHHHHH
Q 036711 45 KFNARHSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 45 ~~~~~~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
..+.. |-.++|||+|=..++..+--
T Consensus 261 ~~GI~--Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 261 EFAIK--PDFALGYSKGEASMWASLGV 285 (538)
T ss_pred hcCCC--CCEEeecCHHHHHHHHHhCC
Confidence 44443 78999999998888777643
No 240
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=67.93 E-value=19 Score=26.12 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHH
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~ 70 (111)
+.+.+..+.+...+.+ +..++++|.|-|++.+..++.
T Consensus 105 ~nI~~AYrFL~~~yep-GD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 105 QNIREAYRFLIFNYEP-GDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHHHHHHHhcCC-CCeEEEeeccchhHHHHHHHH
Confidence 3455555556555543 347999999999999988764
No 241
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=65.65 E-value=25 Score=20.59 Aligned_cols=43 Identities=19% Similarity=0.197 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcCCCCCEEEEeecHHHH--HHHHHHHHCCCceeEEEE
Q 036711 37 EILLYIKEKFNARHSPVIVIGGSYGGM--LATWFRLKYPHVALGALA 81 (111)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~GhS~GG~--ia~~~~~~~p~~~~~~i~ 81 (111)
..++.+...++ +.+++++|-|=-.= +-..++.++|++|.++.+
T Consensus 53 ~~i~~i~~~fP--~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 53 DNIERILRDFP--ERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHCC--CCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 34555556654 45899999885443 344567889999988743
No 242
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=64.82 E-value=7.2 Score=27.48 Aligned_cols=22 Identities=18% Similarity=0.241 Sum_probs=18.8
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+-.+.|-|+|+.++..++..++
T Consensus 44 ~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred CCEEEEECHHHHHHHHHHcCCC
Confidence 4578999999999999998643
No 243
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=64.43 E-value=37 Score=23.74 Aligned_cols=58 Identities=9% Similarity=0.043 Sum_probs=36.5
Q ss_pred ccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 23 LGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 23 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
-..++.....+|+..+++++.. .+.. ++-|+.-|+.|-+|...+.+- .+.-+|...+.
T Consensus 76 I~eftms~g~~sL~~V~dwl~~-~g~~--~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGV 133 (294)
T PF02273_consen 76 INEFTMSIGKASLLTVIDWLAT-RGIR--RIGLIAASLSARIAYEVAADI--NLSFLITAVGV 133 (294)
T ss_dssp -----HHHHHHHHHHHHHHHHH-TT-----EEEEEETTHHHHHHHHTTTS----SEEEEES--
T ss_pred hhhcchHHhHHHHHHHHHHHHh-cCCC--cchhhhhhhhHHHHHHHhhcc--CcceEEEEeee
Confidence 3445666777899999999984 3333 689999999999999999843 35555554433
No 244
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=63.40 E-value=39 Score=26.46 Aligned_cols=47 Identities=11% Similarity=0.041 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEee------cHHHHHHHHHHHHCCCceeEEEEec
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGG------SYGGMLATWFRLKYPHVALGALASS 83 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~Gh------S~GG~ia~~~~~~~p~~~~~~i~~~ 83 (111)
++++...++.+..+ ..+++++|| +.|+.+++...+..-+. .+.+...
T Consensus 323 aRvis~al~d~i~e----~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~d 375 (655)
T COG3887 323 ARVISTALSDIIKE----SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLD 375 (655)
T ss_pred HHHHHHHHHHHHhh----cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEEC
Confidence 34555445444443 238999999 78999998765554443 3344333
No 245
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=63.24 E-value=8.1 Score=24.75 Aligned_cols=22 Identities=32% Similarity=0.403 Sum_probs=19.0
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+=++.|-|.|++++..++..+.
T Consensus 28 ~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 28 KKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred cceEEEECHHHHHHHHHHcCCC
Confidence 4689999999999999998654
No 246
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=62.78 E-value=3.6 Score=27.88 Aligned_cols=18 Identities=28% Similarity=0.543 Sum_probs=13.3
Q ss_pred CCEEEEeecHHHHHHHHH
Q 036711 51 SPVIVIGGSYGGMLATWF 68 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~ 68 (111)
..++++|||+|..=-.++
T Consensus 235 ~~I~i~GhSl~~~D~~Yf 252 (270)
T PF14253_consen 235 DEIIIYGHSLGEVDYPYF 252 (270)
T ss_pred CEEEEEeCCCchhhHHHH
Confidence 379999999998544433
No 247
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=62.34 E-value=25 Score=22.39 Aligned_cols=32 Identities=6% Similarity=-0.163 Sum_probs=18.0
Q ss_pred CCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 50 HSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
+.++.++|-|-.|.+-+.++-..++.+..++=
T Consensus 68 gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD 99 (160)
T PF08484_consen 68 GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVD 99 (160)
T ss_dssp T--EEEE---SHHHHHHHHHT--TTTS--EEE
T ss_pred CCEEEEECcchHHHHHHHHhCCCcceeEEEEe
Confidence 45799999999999888888766666655543
No 248
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=61.12 E-value=10 Score=24.04 Aligned_cols=23 Identities=22% Similarity=0.202 Sum_probs=19.8
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
+-.+.|-|.|+.++..++...+.
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCCH
Confidence 56899999999999999986554
No 249
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=60.21 E-value=9.8 Score=25.16 Aligned_cols=22 Identities=27% Similarity=0.360 Sum_probs=19.5
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
.-.+.|-|.|+++++.++...+
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCCc
Confidence 5589999999999999998775
No 250
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=59.02 E-value=30 Score=19.39 Aligned_cols=45 Identities=24% Similarity=0.211 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhcCC-CCCEEEEeecHHHHHHHHHHHHCCCceeEE
Q 036711 35 YAEILLYIKEKFNAR-HSPVIVIGGSYGGMLATWFRLKYPHVALGA 79 (111)
Q Consensus 35 ~~~~~~~~~~~~~~~-~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~ 79 (111)
+.+.+++++.+-... .+++.++|-|-|=.+|...+..+....+.+
T Consensus 23 V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~gA~Ti 68 (78)
T PF12242_consen 23 VENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGAGADTI 68 (78)
T ss_dssp HHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC--EEE
T ss_pred HHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcCCCCEE
Confidence 334444444432222 247999999999999988877665444433
No 251
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=58.84 E-value=2.7 Score=30.83 Aligned_cols=18 Identities=28% Similarity=0.569 Sum_probs=15.5
Q ss_pred CEEEEeecHHHHHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFR 69 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~ 69 (111)
++-++|||+||.++..+.
T Consensus 151 kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARYAI 168 (405)
T ss_pred eeeeeeeecCCeeeeEEE
Confidence 799999999999887654
No 252
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=58.14 E-value=11 Score=26.07 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=18.0
Q ss_pred CEEEEeecHHHHHHHHHHHHC
Q 036711 52 PVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~ 72 (111)
.=.+.|-|+|+.++..|+...
T Consensus 39 ~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 39 IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred ccEEEEECHHHHHHHHHHcCC
Confidence 457899999999999998763
No 253
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=57.95 E-value=24 Score=23.56 Aligned_cols=22 Identities=23% Similarity=0.394 Sum_probs=18.9
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+-.+.|-|.|+.++..++..++
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCCC
Confidence 5579999999999999997654
No 254
>COG2607 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=57.70 E-value=7.2 Score=27.04 Aligned_cols=50 Identities=10% Similarity=0.167 Sum_probs=26.9
Q ss_pred CcccCCCCCCchhhhhcccccccccc-hhhhHHHHHHHHHHHHHHhcCCCCCEEEE
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFN-SAQAVTDYAEILLYIKEKFNARHSPVIVI 56 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~ 56 (111)
||.|+|+-+-.+-.++.....+ ... ....+.++..+++.++.. ..+++++
T Consensus 94 RGtGKSSLVKA~~~e~~~~glr-LVEV~k~dl~~Lp~l~~~Lr~~----~~kFIlF 144 (287)
T COG2607 94 RGTGKSSLVKALLNEYADEGLR-LVEVDKEDLATLPDLVELLRAR----PEKFILF 144 (287)
T ss_pred CCCChHHHHHHHHHHHHhcCCe-EEEEcHHHHhhHHHHHHHHhcC----CceEEEE
Confidence 8899997544333332222221 222 235566777777777654 3356664
No 255
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.92 E-value=13 Score=25.23 Aligned_cols=22 Identities=27% Similarity=0.197 Sum_probs=19.0
Q ss_pred EEEEeecHHHHHHHHHHHHCCC
Q 036711 53 VIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
=.+.|-|.|++++..++...+.
T Consensus 29 d~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 29 DLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CEEEEECHHHHhHHHHHhCCcc
Confidence 3789999999999999887654
No 256
>PRK13690 hypothetical protein; Provisional
Probab=56.62 E-value=38 Score=22.16 Aligned_cols=32 Identities=22% Similarity=0.266 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHH
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYG 61 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~G 61 (111)
...+++...++.+.+.-..+...++++|.|-.
T Consensus 5 ~i~~~~~~~~~El~~~a~l~~g~i~VvGcSTS 36 (184)
T PRK13690 5 EIKKQTRQILEELLEQANLKPGQIFVLGCSTS 36 (184)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCEEEEecchH
Confidence 34456677777777666666668999999853
No 257
>PRK10279 hypothetical protein; Provisional
Probab=56.17 E-value=25 Score=24.77 Aligned_cols=23 Identities=22% Similarity=0.226 Sum_probs=19.5
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
+-.+.|-|+|+.++..|+....+
T Consensus 34 ~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcCChH
Confidence 56899999999999999976543
No 258
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=55.39 E-value=11 Score=23.90 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=19.5
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
+=.+.|-|.|++++..++..++.
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCCCH
Confidence 56789999999999999887554
No 259
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.36 E-value=23 Score=23.12 Aligned_cols=23 Identities=13% Similarity=-0.005 Sum_probs=19.9
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
.+.++.+|||-.+|-.+++..+-
T Consensus 58 hirlvAwSMGVwvAeR~lqg~~l 80 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGIRL 80 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhccc
Confidence 57899999999999999887763
No 260
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=53.23 E-value=28 Score=24.34 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=19.9
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
+-.+.|-|+|++++..++..+..
T Consensus 40 ~~~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred ccEEEecCHHHHHHHHHHcCCCh
Confidence 67899999999999999986554
No 261
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=52.49 E-value=15 Score=26.43 Aligned_cols=18 Identities=33% Similarity=0.432 Sum_probs=16.0
Q ss_pred EEEeecHHHHHHHHHHHH
Q 036711 54 IVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~~ 71 (111)
++.|-|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 688999999999999864
No 262
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=51.73 E-value=41 Score=22.92 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=17.7
Q ss_pred EEEeecHHHHHHHHHHHHCC
Q 036711 54 IVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~~~p 73 (111)
.+.|-|.|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999998755
No 263
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=50.88 E-value=29 Score=24.62 Aligned_cols=21 Identities=29% Similarity=0.121 Sum_probs=16.7
Q ss_pred CCCEEEEeecHHHHHHHHHHH
Q 036711 50 HSPVIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~ 70 (111)
..|.++.|||+|=+.++..+.
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCceeecccHhHHHHHHHcc
Confidence 348899999999888776654
No 264
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=50.70 E-value=37 Score=27.23 Aligned_cols=19 Identities=21% Similarity=0.336 Sum_probs=16.4
Q ss_pred CEEEEeecHHHHHHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~ 70 (111)
.-++.|.|+||+++..++.
T Consensus 67 ~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 67 VDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CceEEeeCHHHHHHHHHHc
Confidence 3578999999999999886
No 265
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=50.44 E-value=31 Score=23.73 Aligned_cols=24 Identities=17% Similarity=0.163 Sum_probs=19.1
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHV 75 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~ 75 (111)
+|+++|.+.+|+.++.++.+..-.
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G~~ 26 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAGID 26 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTCE
T ss_pred eEEEECCCHHHHHHHHHHHhcccc
Confidence 589999999999999999987643
No 266
>COG3675 Predicted lipase [Lipid metabolism]
Probab=50.19 E-value=12 Score=26.56 Aligned_cols=57 Identities=19% Similarity=0.132 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCCCCEEEEeecHHHHHHHHHH----HHCCCceeEEEEecCcccccccCCCchhh
Q 036711 38 ILLYIKEKFNARHSPVIVIGGSYGGMLATWFR----LKYPHVALGALASSAPILYFDDITPQNGY 98 (111)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~----~~~p~~~~~~i~~~~~~~~~~~~~~~~~~ 98 (111)
..+.+.++++. ...+.+.|||-|+.++.... .++|....-++..+.|... ++++.+|
T Consensus 163 q~~~lleeiP~-~Yrig~tghS~g~aii~vrGtyfe~k~p~vdnlv~tf~~P~it---d~r~~Qy 223 (332)
T COG3675 163 QEQTLLEEIPQ-GYRIGITGHSSGGAIICVRGTYFERKYPRVDNLVVTFGQPAIT---DWRFPQY 223 (332)
T ss_pred HHHHHHHhccc-ceEEEEEeecCCccEEEEeccchhcccCCcccceeeccCCccc---cchhHHH
Confidence 44445555432 13568999999998876444 3566544444566666433 4555555
No 267
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=48.34 E-value=18 Score=25.72 Aligned_cols=17 Identities=29% Similarity=0.257 Sum_probs=13.7
Q ss_pred EEEEeecHHHHHHHHHH
Q 036711 53 VIVIGGSYGGMLATWFR 69 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~ 69 (111)
-.++|||+|=..++..+
T Consensus 126 ~~~~GHSlGE~aA~~~A 142 (343)
T PLN02752 126 DVCAGLSLGEYTALVFA 142 (343)
T ss_pred CeeeeccHHHHHHHHHh
Confidence 46899999998777665
No 268
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=48.34 E-value=11 Score=27.78 Aligned_cols=25 Identities=24% Similarity=0.329 Sum_probs=20.9
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCce
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVA 76 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~ 76 (111)
|-++.|-|.|+.+++.++.+.++++
T Consensus 102 p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 102 PRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHH
Confidence 5589999999999999998766553
No 269
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=48.00 E-value=21 Score=26.29 Aligned_cols=27 Identities=22% Similarity=0.384 Sum_probs=21.7
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeE
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALG 78 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~ 78 (111)
|-++.|-|.|+++++.++...++++..
T Consensus 112 p~~i~GtS~Gaivaa~~a~~~~~e~~~ 138 (391)
T cd07229 112 PRIITGTATGALIAALVGVHTDEELLR 138 (391)
T ss_pred CceEEEecHHHHHHHHHHcCCHHHHHH
Confidence 667999999999999999965555433
No 270
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=47.70 E-value=22 Score=22.39 Aligned_cols=22 Identities=27% Similarity=0.422 Sum_probs=18.6
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+-.+.|-|.|+.++..++....
T Consensus 29 ~d~i~GtSaGal~a~~~a~g~~ 50 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAGYS 50 (175)
T ss_pred eeEEEEECHHHHHHHHHHcCCC
Confidence 4589999999999999987643
No 271
>PRK02399 hypothetical protein; Provisional
Probab=47.60 E-value=98 Score=23.06 Aligned_cols=31 Identities=35% Similarity=0.233 Sum_probs=26.1
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEe
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALAS 82 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~ 82 (111)
-++-+|.|+|..++...++..|--+=+++++
T Consensus 98 gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 98 GVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred EEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 4888999999999999999988877666554
No 272
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=46.78 E-value=38 Score=21.96 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHH
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYG 61 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~G 61 (111)
++.+.++++.+..+.+...++++|.|-.
T Consensus 2 q~~~~~~El~~~a~l~~g~i~VvGcSTS 29 (172)
T PF04260_consen 2 QLRQALEELLEQANLKPGQIFVVGCSTS 29 (172)
T ss_dssp -HHHHHHHHHHHS---TT-EEEEEE-HH
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEeeeHH
Confidence 3445555555555455568999999964
No 273
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=46.55 E-value=19 Score=22.25 Aligned_cols=20 Identities=25% Similarity=0.280 Sum_probs=16.7
Q ss_pred CEEEEeecHHHHHHHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~ 71 (111)
.-.+.|-|.||++++.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 56789999999999888775
No 274
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=45.22 E-value=36 Score=25.02 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=22.4
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
+++++|.+.||+.++..+.+.....+-.++
T Consensus 3 ~VVIIGgG~aG~~aA~~l~~~~~~~~I~li 32 (438)
T PRK13512 3 KIIVVGAVAGGATCASQIRRLDKESDIIIF 32 (438)
T ss_pred eEEEECCcHHHHHHHHHHHhhCCCCCEEEE
Confidence 699999999999999888765433443433
No 275
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=44.55 E-value=21 Score=24.87 Aligned_cols=17 Identities=35% Similarity=0.452 Sum_probs=15.4
Q ss_pred EEEeecHHHHHHHHHHH
Q 036711 54 IVIGGSYGGMLATWFRL 70 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~ 70 (111)
++.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58899999999999876
No 276
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=43.86 E-value=23 Score=26.10 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=21.3
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCcee
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVAL 77 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~ 77 (111)
|-++.|-|.|+++++.++.+.++++.
T Consensus 96 p~iI~GtSAGAivaalla~~t~~el~ 121 (407)
T cd07232 96 PNVISGTSGGSLVAALLCTRTDEELK 121 (407)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 56799999999999999986665543
No 277
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=42.63 E-value=25 Score=24.35 Aligned_cols=21 Identities=29% Similarity=0.428 Sum_probs=17.8
Q ss_pred EEEEeecHHHHHHHHHHHHCC
Q 036711 53 VIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p 73 (111)
=++.|-|.||++++.++..++
T Consensus 36 D~i~GTSaGaiia~~la~g~~ 56 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGYS 56 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCcC
Confidence 478999999999999987653
No 278
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=41.53 E-value=32 Score=23.26 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=18.1
Q ss_pred EEEeecHHHHHHHHHHHHCC
Q 036711 54 IVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~~~p 73 (111)
.+.|-|.|++++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998765
No 279
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=41.35 E-value=5.9 Score=30.03 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=24.8
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEE
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGAL 80 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i 80 (111)
|-++-|.|+|+.+|..++.+.-++++.+.
T Consensus 203 P~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 203 PNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred chhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 67889999999999999998887776653
No 280
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=40.82 E-value=1.3e+02 Score=22.49 Aligned_cols=31 Identities=39% Similarity=0.235 Sum_probs=26.3
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEe
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALAS 82 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~ 82 (111)
-++-+|.|.|..++...++..|--+=+++++
T Consensus 96 Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 96 GVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred EEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 4788999999999999999988877676554
No 281
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=40.67 E-value=50 Score=21.39 Aligned_cols=27 Identities=26% Similarity=0.356 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEeecHH
Q 036711 35 YAEILLYIKEKFNARHSPVIVIGGSYG 61 (111)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~GhS~G 61 (111)
+...++.+.+.-..+...++++|.|-.
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcSTS 29 (172)
T TIGR01440 3 LTTVLEELKDASNLKKGDLFVIGCSTS 29 (172)
T ss_pred HHHHHHHHHHhhCCCCCCEEEEecchH
Confidence 444555555555555568999999853
No 282
>PF10529 Hist_rich_Ca-bd: Histidine-rich Calcium-binding repeat region; InterPro: IPR019552 This entry represents a histidine-rich calcium-binding repeat which appears in proteins called histidine-rich-calcium binding proteins (HRC). HRC is a high capacity, low affinity Ca2+-binding protein, residing in the lumen of the sarcoplasmic reticulum. HRC binds directly to triadin. This binding interaction occurs between the histidine-rich region of HRC and multiple clusters of charged amino acids, named KEKE motifs, in the lumenal domain of triadin. This repeat is found in the acidic region of the protein, which can be long and variable. There is also a cysteine-rich region further towards the C terminus []. HRC may regulate sarcoplasmic reticular calcium transport, play a critical role in maintaining calcium homeostasis, and function in the heart. HRC is a candidate regulator of sarcoplasmic reticular calcium uptake.
Probab=40.32 E-value=15 Score=13.85 Aligned_cols=8 Identities=25% Similarity=0.094 Sum_probs=5.3
Q ss_pred CCcccCCC
Q 036711 1 HRYYGKSI 8 (111)
Q Consensus 1 hrg~G~S~ 8 (111)
||||+...
T Consensus 3 hrgH~~ee 10 (15)
T PF10529_consen 3 HRGHREEE 10 (15)
T ss_pred cCcccccc
Confidence 67777654
No 283
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=39.51 E-value=77 Score=21.28 Aligned_cols=22 Identities=18% Similarity=0.135 Sum_probs=18.9
Q ss_pred EEEEeecHHHHHHHHHHHHCCC
Q 036711 53 VIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
-.+.|-|.|++++..++...+.
T Consensus 31 ~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 31 TPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred CEEEEEcHHHHHHHHHHcCCCH
Confidence 4799999999999999987554
No 284
>PHA02595 tk.4 hypothetical protein; Provisional
Probab=39.01 E-value=20 Score=22.53 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=15.6
Q ss_pred ecHHHHHHHHHHHHCCC
Q 036711 58 GSYGGMLATWFRLKYPH 74 (111)
Q Consensus 58 hS~GG~ia~~~~~~~p~ 74 (111)
..||+.+|..+..++|+
T Consensus 29 g~mG~GIA~~~k~~~P~ 45 (154)
T PHA02595 29 HTMGSGIAGQLAKAFPQ 45 (154)
T ss_pred CcCChHHHHHHHHHcCh
Confidence 48999999999999996
No 285
>COG5418 Predicted secreted protein [Function unknown]
Probab=38.97 E-value=82 Score=20.06 Aligned_cols=35 Identities=14% Similarity=0.107 Sum_probs=25.2
Q ss_pred ccccchhhhHHHHHHHHHHHHHHhcCCCCCEEEEe
Q 036711 23 LGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIG 57 (111)
Q Consensus 23 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G 57 (111)
+.....+...+++.+.+-.+.+++..++.+++++|
T Consensus 70 ~d~~~yRr~c~ki~~pi~~~l~e~k~d~~kii~IG 104 (164)
T COG5418 70 FDHPGYRRVCRKIADPIGRVLEEEKPDGIKIIFIG 104 (164)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHhCcCCceEEEEe
Confidence 33444566778888888887777766666888888
No 286
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=38.97 E-value=68 Score=22.91 Aligned_cols=30 Identities=13% Similarity=0.044 Sum_probs=22.3
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
+++++|.+++|+.++..+.+.....+-.|+
T Consensus 4 ~vvIiG~G~AG~~~a~~lr~~~~~~~Itvi 33 (377)
T PRK04965 4 GIVIIGSGFAARQLVKNIRKQDAHIPITLI 33 (377)
T ss_pred CEEEECCcHHHHHHHHHHHhhCcCCCEEEE
Confidence 799999999999998887664444444444
No 287
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=38.69 E-value=1.1e+02 Score=20.21 Aligned_cols=16 Identities=25% Similarity=0.111 Sum_probs=12.0
Q ss_pred CCCEEEEeecHHHHHH
Q 036711 50 HSPVIVIGGSYGGMLA 65 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia 65 (111)
....+++=||+||...
T Consensus 123 ~~~~~~i~~slgGGTG 138 (216)
T PF00091_consen 123 SLDGFFIVHSLGGGTG 138 (216)
T ss_dssp TESEEEEEEESSSSHH
T ss_pred ccccceecccccceec
Confidence 4468899999987743
No 288
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=38.50 E-value=58 Score=25.12 Aligned_cols=57 Identities=23% Similarity=0.202 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHH---hcCCCCCEEEEeecHHHHHHHHHHHHCCC---ceeEEEEecCccccccc
Q 036711 34 DYAEILLYIKEK---FNARHSPVIVIGGSYGGMLATWFRLKYPH---VALGALASSAPILYFDD 91 (111)
Q Consensus 34 d~~~~~~~~~~~---~~~~~~~~~l~GhS~GG~ia~~~~~~~p~---~~~~~i~~~~~~~~~~~ 91 (111)
|..-.++++++. ++.+..++.|+|.|-|+.-...-+. .|. .++..|+-|+.+.....
T Consensus 198 DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLl-sP~S~glF~raIlQSGS~~~pWA 260 (601)
T KOG4389|consen 198 DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLL-SPGSRGLFHRAILQSGSLNNPWA 260 (601)
T ss_pred HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheec-CCCchhhHHHHHhhcCCCCCCcc
Confidence 444445555544 3445568999999999865544333 232 35666665555544333
No 289
>KOG2308 consensus Phosphatidic acid-preferring phospholipase A1, contains DDHD domain [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]
Probab=38.48 E-value=20 Score=28.56 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=18.9
Q ss_pred CCCEEEEeecHHHHHHHHHHHHC
Q 036711 50 HSPVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~~ 72 (111)
..++.+.|||+|..++...+...
T Consensus 416 ~G~Vsi~gHSLGSvit~Dil~~q 438 (741)
T KOG2308|consen 416 NGKVSIAGHSLGSVITYDILSHQ 438 (741)
T ss_pred cCceeeccCCCCceEEEeecccc
Confidence 34799999999999988777654
No 290
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=38.16 E-value=79 Score=22.79 Aligned_cols=31 Identities=16% Similarity=0.142 Sum_probs=23.3
Q ss_pred CCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
.+++++|.+++|+.++..+.+......-.++
T Consensus 4 ~~vvIIGgG~AG~~aA~~Lr~~~~~~~I~li 34 (396)
T PRK09754 4 KTIIIVGGGQAAAMAAASLRQQGFTGELHLF 34 (396)
T ss_pred CcEEEECChHHHHHHHHHHHhhCCCCCEEEe
Confidence 3799999999999999988776543333333
No 291
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=38.10 E-value=62 Score=20.37 Aligned_cols=22 Identities=27% Similarity=0.368 Sum_probs=18.6
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+++++|-+.+|+.++..+.+..
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~~ 22 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARPG 22 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHTT
T ss_pred CEEEEecHHHHHHHHHHHhcCC
Confidence 3789999999999999988443
No 292
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=37.57 E-value=28 Score=24.61 Aligned_cols=21 Identities=24% Similarity=0.463 Sum_probs=17.6
Q ss_pred CEEEEeecHHHHHHHHHHHHC
Q 036711 52 PVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~ 72 (111)
+-++.|-|.|+.++..++...
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcCC
Confidence 557999999999999988643
No 293
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=37.47 E-value=26 Score=25.64 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=27.9
Q ss_pred CCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 50 HSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
..|++++|.+.||+-.=..+.++|+.+..+.+
T Consensus 118 ~g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i 149 (392)
T PRK14046 118 SERVRVIASARGGMEIEEIAAKEPEAIIQVVV 149 (392)
T ss_pred CCcEEEEEeCCCCCchHHHhhhChhheEEEEc
Confidence 34788999999999999999999999888754
No 294
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=36.92 E-value=64 Score=22.02 Aligned_cols=33 Identities=21% Similarity=-0.078 Sum_probs=22.4
Q ss_pred EEEeecHHHHHHHHHHHH--CC----C--ceeEEEEecCcc
Q 036711 54 IVIGGSYGGMLATWFRLK--YP----H--VALGALASSAPI 86 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~~--~p----~--~~~~~i~~~~~~ 86 (111)
=|+|.|.|+.++..++.. -. . .++-+|++|+..
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~ 147 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFK 147 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCC
Confidence 389999999999998872 11 1 246666666443
No 295
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.11 E-value=42 Score=22.78 Aligned_cols=21 Identities=24% Similarity=0.297 Sum_probs=17.3
Q ss_pred EEEEeecHHHHHHHHHHHHCCC
Q 036711 53 VIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
-.+.|-|.|++++..++. .|+
T Consensus 33 ~~i~GtSaGAl~aa~~a~-~~~ 53 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT-APE 53 (246)
T ss_pred CEEEEECHHHHHHHHHhc-ChH
Confidence 379999999999999983 344
No 296
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=36.01 E-value=36 Score=24.19 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=18.3
Q ss_pred CCCEEEEeecHHHHHHHHHHHH
Q 036711 50 HSPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~ 71 (111)
+.+++|+|.|-|+.+.-.+...
T Consensus 192 ~~~~~LiGFSKGcvVLNqll~E 213 (303)
T PF10561_consen 192 KPPLTLIGFSKGCVVLNQLLYE 213 (303)
T ss_pred CCceEEEEecCcchHHHHHHHH
Confidence 4589999999999988877654
No 297
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=34.76 E-value=62 Score=22.12 Aligned_cols=28 Identities=18% Similarity=0.377 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHhcC--CCCCEEEEeec
Q 036711 32 VTDYAEILLYIKEKFNA--RHSPVIVIGGS 59 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~--~~~~~~l~GhS 59 (111)
.+|+...++.++.+.++ ++..++++||-
T Consensus 117 k~DYe~~v~aik~~~ppl~k~e~~vlmgHG 146 (265)
T COG4822 117 KNDYEICVEAIKDQIPPLNKDEILVLMGHG 146 (265)
T ss_pred hhhHHHHHHHHHHhcCCcCcCeEEEEEecC
Confidence 47899999999988864 34568899973
No 298
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=34.57 E-value=84 Score=22.93 Aligned_cols=31 Identities=23% Similarity=0.230 Sum_probs=22.8
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCceeEEEEe
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHVALGALAS 82 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~ 82 (111)
+++++|-+++|+.++..+.+.....+-.++.
T Consensus 2 ~vvIIGgG~aGl~aA~~l~~~~~~~~Vtli~ 32 (444)
T PRK09564 2 KIIIIGGTAAGMSAAAKAKRLNKELEITVYE 32 (444)
T ss_pred eEEEECCcHHHHHHHHHHHHHCCCCcEEEEE
Confidence 6899999999999998877754334444443
No 299
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=34.20 E-value=26 Score=25.13 Aligned_cols=23 Identities=17% Similarity=0.426 Sum_probs=18.1
Q ss_pred CEEEEeecHHHHHHHHHHHHCCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
|-++.|-|.|++++..++.+.++
T Consensus 97 p~~i~GsSaGAivaa~~~~~t~~ 119 (323)
T cd07231 97 PRVIAGSSVGSIVCAIIATRTDE 119 (323)
T ss_pred CCEEEEECHHHHHHHHHHcCCHH
Confidence 55788999999999988875443
No 300
>PRK06475 salicylate hydroxylase; Provisional
Probab=33.76 E-value=85 Score=22.59 Aligned_cols=23 Identities=13% Similarity=0.140 Sum_probs=19.8
Q ss_pred CCEEEEeecHHHHHHHHHHHHCC
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p 73 (111)
.++.++|-+.+|+.++.++.+..
T Consensus 3 ~~V~IvGgGiaGl~~A~~L~~~G 25 (400)
T PRK06475 3 GSPLIAGAGVAGLSAALELAARG 25 (400)
T ss_pred CcEEEECCCHHHHHHHHHHHhCC
Confidence 37999999999999998887754
No 301
>PRK13938 phosphoheptose isomerase; Provisional
Probab=33.73 E-value=1.4e+02 Score=19.62 Aligned_cols=24 Identities=17% Similarity=0.160 Sum_probs=21.4
Q ss_pred CCCEEEEeecHHHHHHHHHHHHCC
Q 036711 50 HSPVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+.+++++|..-.|.++..++.+..
T Consensus 45 g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 45 GARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHcC
Confidence 458999999999999999998865
No 302
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=33.41 E-value=84 Score=23.49 Aligned_cols=39 Identities=21% Similarity=0.202 Sum_probs=23.6
Q ss_pred cccch-hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHH
Q 036711 24 GYFNS-AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGML 64 (111)
Q Consensus 24 ~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~i 64 (111)
+|+.. .+..+++.+.++...+.. +...-+++=||+||..
T Consensus 100 Gy~~~g~~~~~~~~d~ir~~~E~c--d~~~gf~~~~sl~GGt 139 (446)
T cd02189 100 GYYVHGPQIKEDILDLIRKEVEKC--DSFEGFLVLHSLAGGT 139 (446)
T ss_pred cccccchhhHHHHHHHHHHHHHhC--CCccceEEEecCCCCc
Confidence 34442 445566777776666654 2335678888888743
No 303
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.70 E-value=35 Score=23.85 Aligned_cols=17 Identities=29% Similarity=0.503 Sum_probs=15.1
Q ss_pred EEEeecHHHHHHHHHHH
Q 036711 54 IVIGGSYGGMLATWFRL 70 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~ 70 (111)
++.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 68899999999998874
No 304
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.44 E-value=60 Score=22.24 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=18.4
Q ss_pred EEEEeecHHHHHHHHHHHHCC
Q 036711 53 VIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p 73 (111)
-.+.|-|.|++++..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 468999999999999988665
No 305
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.35 E-value=46 Score=22.49 Aligned_cols=18 Identities=33% Similarity=0.571 Sum_probs=16.2
Q ss_pred EEEeecHHHHHHHHHHHH
Q 036711 54 IVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~~ 71 (111)
++.|-|.||.+++.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 588999999999999876
No 306
>PF07812 TfuA: TfuA-like protein; InterPro: IPR012924 This domain consists of a group of sequences that are similar to the core of TfuA protein (Q52872 from SWISSPROT). This protein is involved in the production of trifolitoxin (TFX), a gene-encoded, post-translationally modified peptide antibiotic []. The role of TfuA in TFX synthesis is unknown, and it may be involved in other cellular processes [].
Probab=31.34 E-value=83 Score=19.21 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=14.4
Q ss_pred EEEEeecHHHHHHHHHHH
Q 036711 53 VIVIGGSYGGMLATWFRL 70 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~ 70 (111)
.++-+-|||++-|.++..
T Consensus 24 ~V~GasSMGALRAaEl~~ 41 (120)
T PF07812_consen 24 RVFGASSMGALRAAELAP 41 (120)
T ss_pred EEEecccHHHHHHHHhHh
Confidence 566678999999988873
No 307
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=30.74 E-value=23 Score=24.40 Aligned_cols=42 Identities=19% Similarity=0.239 Sum_probs=20.3
Q ss_pred CcccCCCCCCchhhhhcccccccccch-hhhHHHHHHHHHHHHH
Q 036711 2 RYYGKSIPFGSREEALKNASTLGYFNS-AQAVTDYAEILLYIKE 44 (111)
Q Consensus 2 rg~G~S~p~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~ 44 (111)
||.|+|+-+-.+..++...+ ...... ...+.++.++++.++.
T Consensus 61 rGtGKSSlVkall~~y~~~G-LRlIev~k~~L~~l~~l~~~l~~ 103 (249)
T PF05673_consen 61 RGTGKSSLVKALLNEYADQG-LRLIEVSKEDLGDLPELLDLLRD 103 (249)
T ss_pred CCCCHHHHHHHHHHHHhhcC-ceEEEECHHHhccHHHHHHHHhc
Confidence 78888864333322222221 222222 3455666677766653
No 308
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=30.48 E-value=88 Score=22.09 Aligned_cols=21 Identities=19% Similarity=0.153 Sum_probs=16.6
Q ss_pred CEEEEeecHHHHHHHHHHHHC
Q 036711 52 PVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~ 72 (111)
+++++|-+++|+.++.-+.+.
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~ 21 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMK 21 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCc
Confidence 478999999998887776543
No 309
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=30.34 E-value=2.2e+02 Score=21.28 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=15.9
Q ss_pred CCCEEEEeecHHHHH--------HHHHHHHCCCc
Q 036711 50 HSPVIVIGGSYGGML--------ATWFRLKYPHV 75 (111)
Q Consensus 50 ~~~~~l~GhS~GG~i--------a~~~~~~~p~~ 75 (111)
...-+++=||+||.. .-.+...||+.
T Consensus 129 ~l~gf~i~~SlgGGTGSG~gs~l~e~L~d~y~~~ 162 (431)
T cd02188 129 SLEGFVLCHSIAGGTGSGMGSYLLERLNDRYPKK 162 (431)
T ss_pred CcceeEEEecCCCCcchhHHHHHHHHHHhHcCcc
Confidence 345678888887633 33444567764
No 310
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=30.28 E-value=1.2e+02 Score=19.84 Aligned_cols=38 Identities=16% Similarity=0.116 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecH----HHHHHHHHHHHCC
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSY----GGMLATWFRLKYP 73 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~----GG~ia~~~~~~~p 73 (111)
+.+...+..+..+.. ..++++|||. |..++..++.+..
T Consensus 94 e~~a~al~~~i~~~~---p~lVL~~~t~~~~~grdlaprlAarLg 135 (202)
T cd01714 94 LATAKALAAAIKKIG---VDLILTGKQSIDGDTGQVGPLLAELLG 135 (202)
T ss_pred HHHHHHHHHHHHHhC---CCEEEEcCCcccCCcCcHHHHHHHHhC
Confidence 334444444433332 2699999999 8888888887744
No 311
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=30.24 E-value=93 Score=22.47 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=19.6
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+++++|-+.+|+.++..+.+..
T Consensus 2 ~V~IiGgGiaGla~A~~L~~~g 23 (414)
T TIGR03219 2 RVAIIGGGIAGVALALNLCKHS 23 (414)
T ss_pred eEEEECCCHHHHHHHHHHHhcC
Confidence 6899999999999999988765
No 312
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.17 E-value=59 Score=22.26 Aligned_cols=22 Identities=23% Similarity=0.105 Sum_probs=18.6
Q ss_pred EEEEeecHHHHHHHHHHHHCCC
Q 036711 53 VIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
-.+.|-|.|+.++..++...+.
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~~ 59 (249)
T cd07220 38 RKIYGASAGALTATALVTGVCL 59 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCCH
Confidence 5688999999999999887653
No 313
>PRK08163 salicylate hydroxylase; Provisional
Probab=30.16 E-value=1.1e+02 Score=21.87 Aligned_cols=23 Identities=30% Similarity=0.655 Sum_probs=19.9
Q ss_pred CCEEEEeecHHHHHHHHHHHHCC
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p 73 (111)
.+++++|-+.+|+.++..+.+..
T Consensus 5 ~~V~IvGaGiaGl~~A~~L~~~g 27 (396)
T PRK08163 5 TPVLIVGGGIGGLAAALALARQG 27 (396)
T ss_pred CeEEEECCcHHHHHHHHHHHhCC
Confidence 37999999999999998888754
No 314
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=30.11 E-value=75 Score=22.02 Aligned_cols=44 Identities=25% Similarity=0.334 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcC-CCCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 37 EILLYIKEKFNA-RHSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 37 ~~~~~~~~~~~~-~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
..++.+.+++.. ++.++.=+|..|||. +..++.++.-.+.++-+
T Consensus 49 ~k~~~~~~~~~l~~G~~vLDiGcGwG~~-~~~~a~~~g~~v~gitl 93 (273)
T PF02353_consen 49 RKLDLLCEKLGLKPGDRVLDIGCGWGGL-AIYAAERYGCHVTGITL 93 (273)
T ss_dssp HHHHHHHTTTT--TT-EEEEES-TTSHH-HHHHHHHH--EEEEEES
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCccHH-HHHHHHHcCcEEEEEEC
Confidence 334445555443 344688899999985 55566676655666543
No 315
>KOG2248 consensus 3'-5' exonuclease [Replication, recombination and repair]
Probab=30.04 E-value=44 Score=24.54 Aligned_cols=30 Identities=27% Similarity=0.214 Sum_probs=19.6
Q ss_pred CEEEEeecHHHHH-HHHHHHHCCCceeEEEEec
Q 036711 52 PVIVIGGSYGGML-ATWFRLKYPHVALGALASS 83 (111)
Q Consensus 52 ~~~l~GhS~GG~i-a~~~~~~~p~~~~~~i~~~ 83 (111)
.-+++|||+=-=+ ++.+ .||..++..++..
T Consensus 294 ~TILVGHSLenDL~aLKl--~H~~ViDTa~lf~ 324 (380)
T KOG2248|consen 294 NTILVGHSLENDLKALKL--DHPSVIDTAVLFK 324 (380)
T ss_pred CcEEEeechhhHHHHHhh--hCCceeeeeEEEe
Confidence 6899999997533 2232 5777777665543
No 316
>COG4475 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.88 E-value=1.4e+02 Score=19.31 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHH
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYG 61 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~G 61 (111)
.+|+..++..+.++-..+...++++|.|-.
T Consensus 5 ~k~~~~vl~d~~~~s~lk~g~lfvlG~StS 34 (180)
T COG4475 5 KKDTRTVLDDVQDQSELKQGQLFVLGLSTS 34 (180)
T ss_pred HHHHHHHHHHHHHhhccCCCCEEEEecchH
Confidence 356666777776665555668999999853
No 317
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.24 E-value=51 Score=23.32 Aligned_cols=17 Identities=35% Similarity=0.622 Sum_probs=14.5
Q ss_pred EEEeecHHHHHHHHHHH
Q 036711 54 IVIGGSYGGMLATWFRL 70 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~ 70 (111)
.+.|-|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 68899999999988753
No 318
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=27.47 E-value=54 Score=23.57 Aligned_cols=19 Identities=21% Similarity=0.480 Sum_probs=16.5
Q ss_pred EEEEeecHHHHHHHHHHHH
Q 036711 53 VIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~ 71 (111)
=.+.|-|.||.+|+.++..
T Consensus 45 DliaGTStGgiiA~~la~~ 63 (349)
T cd07214 45 DVIAGTSTGGLITAMLTAP 63 (349)
T ss_pred CEEeeCCHHHHHHHHHhcC
Confidence 3688999999999999874
No 319
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=26.97 E-value=80 Score=19.63 Aligned_cols=18 Identities=22% Similarity=0.183 Sum_probs=16.1
Q ss_pred CEEEEeecHHHHHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFR 69 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~ 69 (111)
.-.+.|-|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 568899999999999887
No 320
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=26.70 E-value=50 Score=22.87 Aligned_cols=30 Identities=20% Similarity=0.468 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHHHHHHhc--CCCCCEEEEeec
Q 036711 30 QAVTDYAEILLYIKEKFN--ARHSPVIVIGGS 59 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~--~~~~~~~l~GhS 59 (111)
...+|+.++++.+...++ ..+..++++||-
T Consensus 119 ~~~~D~~~va~aL~~~~~~~~~~~a~vlmGHG 150 (262)
T PF06180_consen 119 NSPEDYEAVAEALAEEFPKKRKDEAVVLMGHG 150 (262)
T ss_dssp -SHHHHHHHHHHHHCCS-TT-TTEEEEEEE--
T ss_pred CChHHHHHHHHHHHHhccccCCCCEEEEEeCC
Confidence 456788888888876654 134578899983
No 321
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=26.67 E-value=1e+02 Score=24.31 Aligned_cols=18 Identities=17% Similarity=0.091 Sum_probs=14.2
Q ss_pred CCCEEEEeecHHHHHHHH
Q 036711 50 HSPVIVIGGSYGGMLATW 67 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~ 67 (111)
..|++++|+++|-.+-..
T Consensus 193 ~dpv~i~g~~~g~~~y~r 210 (608)
T PRK01021 193 GDPVNILCYGCGLFPSLA 210 (608)
T ss_pred CCceEEEccccchhHHHH
Confidence 348999999999887653
No 322
>PTZ00387 epsilon tubulin; Provisional
Probab=26.55 E-value=1.3e+02 Score=22.74 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=18.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHH
Q 036711 30 QAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGML 64 (111)
Q Consensus 30 ~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~i 64 (111)
...+++.+.++...++- +...-+++=||+||..
T Consensus 112 ~~~d~~~d~Ir~~~E~c--D~l~gf~i~~slgGGT 144 (465)
T PTZ00387 112 KYIDSISESVRRQVEQC--DSLQSFFLMHSLGGGT 144 (465)
T ss_pred HHHHHHHHHHHHHHHhc--cCcceEEEEeecCCCc
Confidence 34455555555555442 2224467778887644
No 323
>cd03331 Macro_Poa1p_like_SNF2 Macro domain, Poa1p_like family, SNF2 subfamily. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this subfamily contain a C-terminal macro domain that show similarity to the yeast protein Poa1p, reported to be a phosphatase specific for Appr-1"-p, a tRNA splicing metabolite. In addition, they also contain an SNF2 domain, defined by the presence of seven
Probab=26.11 E-value=43 Score=21.18 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=14.6
Q ss_pred ecHH-HHHHHHHHHHCCC
Q 036711 58 GSYG-GMLATWFRLKYPH 74 (111)
Q Consensus 58 hS~G-G~ia~~~~~~~p~ 74 (111)
.+|| |.++..+..++|.
T Consensus 30 G~WG~gGia~al~~k~p~ 47 (152)
T cd03331 30 GHWGRGGLFTALEKRSDQ 47 (152)
T ss_pred CCCCcchHHHHHHHhCCc
Confidence 3699 7899999999996
No 324
>PRK12467 peptide synthase; Provisional
Probab=26.01 E-value=1.2e+02 Score=29.18 Aligned_cols=21 Identities=33% Similarity=0.390 Sum_probs=18.3
Q ss_pred CCEEEEeecHHHHHHHHHHHH
Q 036711 51 SPVIVIGGSYGGMLATWFRLK 71 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~ 71 (111)
.|..+.|+|+||.++..++..
T Consensus 3757 ~p~~l~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3757 GPYGLLGWSLGGTLARLVAEL 3777 (3956)
T ss_pred CCeeeeeeecchHHHHHHHHH
Confidence 489999999999999988764
No 325
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=25.94 E-value=1.3e+02 Score=22.26 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCc
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV 75 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~ 75 (111)
|+.++...+. ..++.++|.-+.|+-++.++.+....
T Consensus 4 ~~~~~~~~~~------~~~i~v~G~G~sG~a~a~~L~~~G~~ 39 (458)
T PRK01710 4 DFNEFKKFIK------NKKVAVVGIGVSNIPLIKFLVKLGAK 39 (458)
T ss_pred hHHHHhhhhc------CCeEEEEcccHHHHHHHHHHHHCCCE
Confidence 5556655544 23799999999999777777765543
No 326
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=25.94 E-value=86 Score=20.55 Aligned_cols=30 Identities=10% Similarity=0.076 Sum_probs=21.7
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecH
Q 036711 29 AQAVTDYAEILLYIKEKFNARHSPVIVIGGSY 60 (111)
Q Consensus 29 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~ 60 (111)
+...+.+..+++.+..+++.. +-.++||+-
T Consensus 129 ~aQ~~aL~~L~~~L~~~y~i~--~~~IvGH~d 158 (185)
T PRK11789 129 DAQYQALAALTRALRAAYPII--AERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHHHHcCCC--HHhEEehhh
Confidence 344577888899998887542 357999974
No 327
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=25.83 E-value=3e+02 Score=21.42 Aligned_cols=44 Identities=20% Similarity=0.278 Sum_probs=25.4
Q ss_pred hhhhHHHHHHH-HHHHHHHhcCCCCCEEEEee-cHHHHHHHHHHHHCC
Q 036711 28 SAQAVTDYAEI-LLYIKEKFNARHSPVIVIGG-SYGGMLATWFRLKYP 73 (111)
Q Consensus 28 ~~~~~~d~~~~-~~~~~~~~~~~~~~~~l~Gh-S~GG~ia~~~~~~~p 73 (111)
.+..++.+.+- .+.+..++. +.|-.++|| |-||.+|..++.+-.
T Consensus 379 lWPyLe~fa~d~~~~i~~e~~--~~PdlI~GnYsDgnlvA~LLs~~lg 424 (550)
T PF00862_consen 379 LWPYLEEFADDAEREILAELQ--GKPDLIIGNYSDGNLVASLLSRKLG 424 (550)
T ss_dssp -GGGHHHHHHHHHHHHHHHHT--S--SEEEEEHHHHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHHHHHHhC--CCCcEEEeccCcchHHHHHHHhhcC
Confidence 44555554432 334444443 347788888 888888888887644
No 328
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=25.61 E-value=57 Score=21.21 Aligned_cols=13 Identities=15% Similarity=0.248 Sum_probs=10.0
Q ss_pred CEEEEeecHHHHH
Q 036711 52 PVIVIGGSYGGML 64 (111)
Q Consensus 52 ~~~l~GhS~GG~i 64 (111)
..+|+|||+--=+
T Consensus 102 ~tILVGHsL~nDL 114 (174)
T cd06143 102 GCIFVGHGLAKDF 114 (174)
T ss_pred CCEEEeccchhHH
Confidence 4699999987733
No 329
>PRK06847 hypothetical protein; Provisional
Probab=25.36 E-value=1.5e+02 Score=20.89 Aligned_cols=22 Identities=27% Similarity=0.486 Sum_probs=19.6
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+++++|-..+|+.++..+.+..
T Consensus 6 ~V~IVGaG~aGl~~A~~L~~~g 27 (375)
T PRK06847 6 KVLIVGGGIGGLSAAIALRRAG 27 (375)
T ss_pred eEEEECCCHHHHHHHHHHHhCC
Confidence 7999999999999999988764
No 330
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=25.25 E-value=94 Score=24.70 Aligned_cols=41 Identities=22% Similarity=0.352 Sum_probs=27.2
Q ss_pred hcCCCCCEEEEeecHHHHHHHHHHHH---CCCc-eeEEEEecCcc
Q 036711 46 FNARHSPVIVIGGSYGGMLATWFRLK---YPHV-ALGALASSAPI 86 (111)
Q Consensus 46 ~~~~~~~~~l~GhS~GG~ia~~~~~~---~p~~-~~~~i~~~~~~ 86 (111)
++..++++++.|-|-||-+....+.+ +.-+ -+|+++.=+|.
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred hCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 34456799999999999877666554 2223 36776654443
No 331
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=24.70 E-value=2.9e+02 Score=20.30 Aligned_cols=33 Identities=12% Similarity=-0.013 Sum_probs=26.6
Q ss_pred CCCEEEEeecHHHHHHHHHHHHCCCceeEEEEec
Q 036711 50 HSPVIVIGGSYGGMLATWFRLKYPHVALGALASS 83 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~ 83 (111)
-.++++.|.|-=|-.+...+. ..++|.+++-+.
T Consensus 171 i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~V 203 (367)
T PF10142_consen 171 IEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIV 203 (367)
T ss_pred ccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEE
Confidence 348999999999999998888 567788876444
No 332
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=24.65 E-value=2.6e+02 Score=19.81 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHH-----HHHCCCceeEEE
Q 036711 31 AVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWF-----RLKYPHVALGAL 80 (111)
Q Consensus 31 ~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~-----~~~~p~~~~~~i 80 (111)
.++|...+++.++..- ++.++.++=|+-||.+-... ..+++..+..+|
T Consensus 73 ~i~dse~v~raI~~~~--~~~~IdLii~TpGG~v~AA~~I~~~l~~~~~~v~v~V 125 (285)
T PF01972_consen 73 DIDDSEFVLRAIREAP--KDKPIDLIIHTPGGLVDAAEQIARALREHPAKVTVIV 125 (285)
T ss_pred cHhhHHHHHHHHHhcC--CCCceEEEEECCCCcHHHHHHHHHHHHhCCCCEEEEE
Confidence 4467777777776542 24478899999999876543 445777655544
No 333
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=24.62 E-value=1.4e+02 Score=17.71 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHC
Q 036711 32 VTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 32 ~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~ 72 (111)
.+++.++++.-. ..|++++=||.=+.++......+
T Consensus 7 ~eql~~i~~~S~------~~~~~iFKHSt~C~IS~~a~~~~ 41 (105)
T PF11009_consen 7 EEQLEEILEESK------EKPVLIFKHSTRCPISAMALREF 41 (105)
T ss_dssp HHHHHHHHHH---------SEEEEEEE-TT-HHHHHHHHHH
T ss_pred HHHHHHHHHhcc------cCcEEEEEeCCCChhhHHHHHHH
Confidence 345555554422 23899999999888888776543
No 334
>COG5023 Tubulin [Cytoskeleton]
Probab=23.62 E-value=77 Score=23.52 Aligned_cols=52 Identities=15% Similarity=0.230 Sum_probs=31.8
Q ss_pred cccch-hhhHHHHHHHHHHHHHHhcCCCCCEEEEeecHHHHHH--------HHHHHHCCCcee
Q 036711 24 GYFNS-AQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLA--------TWFRLKYPHVAL 77 (111)
Q Consensus 24 ~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia--------~~~~~~~p~~~~ 77 (111)
++++. ...++|+.+.++...+.- +...=+++=||.||... -.+...||+.+.
T Consensus 104 GhYtvG~e~~ddvmd~IrreAd~c--D~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~ 164 (443)
T COG5023 104 GHYTVGKEIIDDVMDMIRREADGC--DGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIK 164 (443)
T ss_pred cccchhHHHHHHHHHHHHHHhhcC--ccccceeeeeeccCcCcccHHHHHHHHHHHhcchhhe
Confidence 43444 456678888887765542 34456788888776543 344456887653
No 335
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.40 E-value=1.1e+02 Score=21.72 Aligned_cols=37 Identities=19% Similarity=0.173 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeec--HHHHHHHHHHHH
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGS--YGGMLATWFRLK 71 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS--~GG~ia~~~~~~ 71 (111)
.-+.+++++... ...+..+.++|-| ||--++..+..+
T Consensus 144 ~aii~lL~~~~i--~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 144 SGCLRLLEDTCG--DLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHhCC--CCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 344555555432 2346689999997 999999998864
No 336
>PRK07236 hypothetical protein; Provisional
Probab=23.18 E-value=1.7e+02 Score=20.90 Aligned_cols=30 Identities=27% Similarity=0.344 Sum_probs=23.0
Q ss_pred CCEEEEeecHHHHHHHHHHHHCCCceeEEEEe
Q 036711 51 SPVIVIGGSYGGMLATWFRLKYPHVALGALAS 82 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~ 82 (111)
.+++++|-.++|+.++..+.+.. ++..|+-
T Consensus 7 ~~ViIVGaG~aGl~~A~~L~~~G--~~v~v~E 36 (386)
T PRK07236 7 PRAVVIGGSLGGLFAALLLRRAG--WDVDVFE 36 (386)
T ss_pred CeEEEECCCHHHHHHHHHHHhCC--CCEEEEe
Confidence 47999999999999998888764 3444444
No 337
>PRK07588 hypothetical protein; Provisional
Probab=23.11 E-value=1.6e+02 Score=21.03 Aligned_cols=22 Identities=18% Similarity=0.381 Sum_probs=19.2
Q ss_pred CEEEEeecHHHHHHHHHHHHCC
Q 036711 52 PVIVIGGSYGGMLATWFRLKYP 73 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p 73 (111)
+++++|-..+|..++..+.+..
T Consensus 2 ~V~IVGgG~aGl~~A~~L~~~G 23 (391)
T PRK07588 2 KVAISGAGIAGPTLAYWLRRYG 23 (391)
T ss_pred eEEEECccHHHHHHHHHHHHCC
Confidence 5899999999999998887764
No 338
>PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i.e., the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (deaminase) and the subsequent reduction of the ribosyl side chain (reductase) []. The domain is also present in some HTP reductases from archaea and fungi.; GO: 0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity, 0009231 riboflavin biosynthetic process, 0055114 oxidation-reduction process; PDB: 3KY8_B 3KGY_B 2GD9_B 3JTW_B 2XW7_B 2D5N_B 2B3Z_A 3EX8_B 2AZN_A 2P4G_A ....
Probab=23.10 E-value=2.1e+02 Score=18.28 Aligned_cols=40 Identities=28% Similarity=0.301 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHCCCceeEEEE
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHVALGALA 81 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~p~~~~~~i~ 81 (111)
|+.+.++.++++ + ...+.+.| ||.+...+... +.++-+.+
T Consensus 122 dl~~~l~~L~~~-g--~~~i~v~G---G~~l~~~~l~~--gLvDEl~l 161 (200)
T PF01872_consen 122 DLEEALRRLKER-G--GKDILVEG---GGSLNGSFLRA--GLVDELSL 161 (200)
T ss_dssp HHHHHHHHHHHT-T--TSEEEEEE---HHHHHHHHHHT--T--SEEEE
T ss_pred CHHHHHHHHHhc-C--CCEEEEec---hHHHHHHHHhC--CCCCEEEE
Confidence 577778888776 3 23677777 77777766653 45555533
No 339
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD. Members of this family are slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. strain PCC 6803, and close homologs (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyzes the first step that is committed to myxoxanthophyll.
Probab=22.36 E-value=1.8e+02 Score=21.64 Aligned_cols=24 Identities=29% Similarity=0.325 Sum_probs=20.6
Q ss_pred CEEEEeecHHHHHHHHHHHHCCCc
Q 036711 52 PVIVIGGSYGGMLATWFRLKYPHV 75 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~p~~ 75 (111)
+++++|--+||+.+..++.+..-.
T Consensus 3 dvvIIGaG~~GL~aa~~La~~G~~ 26 (492)
T TIGR02733 3 SVVVIGAGIAGLTAAALLAKRGYR 26 (492)
T ss_pred eEEEECcCHHHHHHHHHHHHCCCe
Confidence 689999999999999998886543
No 340
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=22.34 E-value=84 Score=20.95 Aligned_cols=29 Identities=21% Similarity=0.194 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeecHH
Q 036711 33 TDYAEILLYIKEKFNARHSPVIVIGGSYG 61 (111)
Q Consensus 33 ~d~~~~~~~~~~~~~~~~~~~~l~GhS~G 61 (111)
.|+.+.++...++.+......+-+||++|
T Consensus 136 ~~v~~a~~~~~~~~G~~~~~~~~~GHgiG 164 (228)
T cd01090 136 KDIAAELNEMYREHDLLRYRTFGYGHSFG 164 (228)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCcccc
Confidence 34444444444443332223445799998
No 341
>COG3621 Patatin [General function prediction only]
Probab=21.98 E-value=70 Score=23.33 Aligned_cols=21 Identities=33% Similarity=0.425 Sum_probs=17.2
Q ss_pred EEEeecHHHHHHHHHHHHCCC
Q 036711 54 IVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 54 ~l~GhS~GG~ia~~~~~~~p~ 74 (111)
++-|-|.||.+++.++...+.
T Consensus 45 l~~GTSiGgilal~La~~ks~ 65 (394)
T COG3621 45 LIGGTSIGGILALGLALGKSP 65 (394)
T ss_pred eecCccHHHHHHHHHhcCCCC
Confidence 356999999999999876554
No 342
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=21.85 E-value=2.2e+02 Score=17.90 Aligned_cols=34 Identities=15% Similarity=0.330 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHHHHHHHHC
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKY 72 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia~~~~~~~ 72 (111)
++.++++.+.. ..+++++|....+.++..+..+.
T Consensus 19 ~~~~~~~~l~~-----a~~I~i~G~G~S~~~A~~~~~~l 52 (179)
T TIGR03127 19 ELDKLADKIIK-----AKRIFVAGAGRSGLVGKAFAMRL 52 (179)
T ss_pred HHHHHHHHHHh-----CCEEEEEecCHHHHHHHHHHHHH
Confidence 44455554433 23799999888888888777654
No 343
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.51 E-value=1.4e+02 Score=17.81 Aligned_cols=30 Identities=27% Similarity=0.354 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEeecHHHHHH
Q 036711 34 DYAEILLYIKEKFNARHSPVIVIGGSYGGMLA 65 (111)
Q Consensus 34 d~~~~~~~~~~~~~~~~~~~~l~GhS~GG~ia 65 (111)
+....++.....++.+ .++++||+--|++.
T Consensus 44 ~~~~sl~~av~~l~v~--~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGVK--HIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCCC--EEEEEccCCCcHHH
Confidence 3445555555555433 69999997666655
No 344
>PRK14989 nitrite reductase subunit NirD; Provisional
Probab=21.39 E-value=2.4e+02 Score=23.13 Aligned_cols=35 Identities=14% Similarity=-0.047 Sum_probs=23.9
Q ss_pred CEEEEeecHHHHHHHHHHHHC--CCceeEEEEecCcc
Q 036711 52 PVIVIGGSYGGMLATWFRLKY--PHVALGALASSAPI 86 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~~~~--p~~~~~~i~~~~~~ 86 (111)
+++++|.+|+|+.++.-+.+. +...+-.|+...+.
T Consensus 5 kIVIVG~G~AG~~aa~~L~~~~~~~~~~Itvi~~e~~ 41 (847)
T PRK14989 5 RLAIIGNGMVGHRFIEDLLDKADAANFDITVFCEEPR 41 (847)
T ss_pred cEEEECCCHHHHHHHHHHHhhCCCCCCeEEEEECCCC
Confidence 799999999999888776543 33455555543333
No 345
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=21.17 E-value=2.7e+02 Score=20.34 Aligned_cols=29 Identities=24% Similarity=0.209 Sum_probs=22.6
Q ss_pred CCCEEEEeecHHHHHHHHHH-HHCCCceeE
Q 036711 50 HSPVIVIGGSYGGMLATWFR-LKYPHVALG 78 (111)
Q Consensus 50 ~~~~~l~GhS~GG~ia~~~~-~~~p~~~~~ 78 (111)
..+++++|-|-||--++... ...|..+..
T Consensus 156 ~~~iV~IGaStGGp~AL~~il~~lP~~~p~ 185 (350)
T COG2201 156 ARKIVAIGASTGGPAALRAVLPALPADFPA 185 (350)
T ss_pred CccEEEEEeCCCCHHHHHHHHHhCCCCCCC
Confidence 34689999999999999764 467877653
No 346
>COG4425 Predicted membrane protein [Function unknown]
Probab=20.98 E-value=1.4e+02 Score=22.95 Aligned_cols=37 Identities=24% Similarity=0.090 Sum_probs=24.4
Q ss_pred CCEEEEeecHHHHHHHH-H---HHHCCCceeEEEEecCcccc
Q 036711 51 SPVIVIGGSYGGMLATW-F---RLKYPHVALGALASSAPILY 88 (111)
Q Consensus 51 ~~~~l~GhS~GG~ia~~-~---~~~~p~~~~~~i~~~~~~~~ 88 (111)
-|.++.|-|+|++-... . -.--.+ ++|+..+++|.+.
T Consensus 397 PKLylhG~SLGa~~s~~~s~dl~dvl~d-fdGaLwSGppf~s 437 (588)
T COG4425 397 PKLYLHGESLGAMGSEAPSMDLFDVLGD-FDGALWSGPPFNS 437 (588)
T ss_pred CceEEeccccccccCccccccHHHHHhh-cccceecCCCCCc
Confidence 37999999999976655 1 111222 7788777766643
No 347
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=20.95 E-value=1.8e+02 Score=20.49 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=23.4
Q ss_pred EEEEeecHHHHHHHHHHHHCCCceeEEEEecCc
Q 036711 53 VIVIGGSYGGMLATWFRLKYPHVALGALASSAP 85 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p~~~~~~i~~~~~ 85 (111)
++++|-..+|..++..+.+.. ++.+|+-..+
T Consensus 2 ViIvGaG~aGl~~A~~L~~~G--~~v~v~Er~~ 32 (385)
T TIGR01988 2 IVIVGGGMVGLALALALARSG--LKIALIEATP 32 (385)
T ss_pred EEEECCCHHHHHHHHHHhcCC--CEEEEEeCCC
Confidence 789999999999998888764 4555554443
No 348
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=20.59 E-value=1.8e+02 Score=27.24 Aligned_cols=18 Identities=22% Similarity=0.285 Sum_probs=15.4
Q ss_pred CEEEEeecHHHHHHHHHH
Q 036711 52 PVIVIGGSYGGMLATWFR 69 (111)
Q Consensus 52 ~~~l~GhS~GG~ia~~~~ 69 (111)
|-.++|||+|=+.++..+
T Consensus 675 Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 675 ADMTAGHSFGELSALCAA 692 (2582)
T ss_pred cceeecCCHHHHHHHHHh
Confidence 778999999998887765
No 349
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=20.56 E-value=2.1e+02 Score=20.99 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=18.0
Q ss_pred EEEEeecHHHHHHHHHHHHCCC
Q 036711 53 VIVIGGSYGGMLATWFRLKYPH 74 (111)
Q Consensus 53 ~~l~GhS~GG~ia~~~~~~~p~ 74 (111)
++++|-+.+|..|+..+.+...
T Consensus 2 VVVvGgG~aG~~AAi~AAr~G~ 23 (428)
T PF12831_consen 2 VVVVGGGPAGVAAAIAAARAGA 23 (428)
T ss_dssp EEEE--SHHHHHHHHHHHHTTS
T ss_pred EEEECccHHHHHHHHHHHHCCC
Confidence 7899999999999999998765
Done!