Query 036712
Match_columns 1020
No_of_seqs 630 out of 2286
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 07:25:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w5y_A Histone-lysine N-methyl 100.0 1.3E-36 4.5E-41 316.1 15.3 155 864-1020 38-192 (192)
2 3ooi_A Histone-lysine N-methyl 100.0 5.1E-35 1.7E-39 313.0 13.9 170 847-1019 59-231 (232)
3 3ope_A Probable histone-lysine 100.0 7.5E-35 2.6E-39 309.9 13.3 171 848-1020 41-214 (222)
4 3h6l_A Histone-lysine N-methyl 100.0 1.1E-34 3.6E-39 317.6 14.2 171 847-1020 85-257 (278)
5 3bo5_A Histone-lysine N-methyl 100.0 9E-33 3.1E-37 304.5 13.0 155 865-1020 113-286 (290)
6 2r3a_A Histone-lysine N-methyl 100.0 1.4E-32 4.7E-37 304.1 12.1 154 866-1020 128-300 (300)
7 1mvh_A Cryptic LOCI regulator 100.0 3.6E-32 1.2E-36 300.9 12.2 153 866-1019 125-297 (299)
8 1ml9_A Histone H3 methyltransf 100.0 2.7E-32 9.2E-37 302.7 9.8 155 865-1019 120-301 (302)
9 3hna_A Histone-lysine N-methyl 100.0 6.2E-32 2.1E-36 297.3 6.6 146 866-1018 135-287 (287)
10 3f9x_A Histone-lysine N-methyl 100.0 6.1E-29 2.1E-33 252.5 16.1 135 864-999 16-155 (166)
11 2f69_A Histone-lysine N-methyl 99.9 2E-24 6.8E-29 234.5 12.5 117 878-999 109-235 (261)
12 1n3j_A A612L, histone H3 lysin 99.9 9.9E-25 3.4E-29 210.1 8.1 110 877-1001 3-112 (119)
13 2qpw_A PR domain zinc finger p 99.9 2.3E-24 7.7E-29 215.5 10.7 121 864-999 15-146 (149)
14 1h3i_A Histone H3 lysine 4 spe 99.9 1.1E-23 3.9E-28 232.6 12.6 118 877-999 162-289 (293)
15 3s8p_A Histone-lysine N-methyl 99.9 1.7E-23 5.9E-28 226.8 7.8 136 875-1019 128-268 (273)
16 3qby_A Hepatoma-derived growth 99.9 4.8E-23 1.6E-27 190.5 5.7 85 218-318 2-86 (94)
17 2daq_A WHSC1L1 protein, isofor 99.9 3.6E-22 1.2E-26 190.0 7.8 89 221-319 8-97 (110)
18 4fu6_A PC4 and SFRS1-interacti 99.8 5.3E-22 1.8E-26 199.4 6.1 92 212-319 10-104 (153)
19 3llr_A DNA (cytosine-5)-methyl 99.8 3.6E-21 1.2E-25 192.1 6.2 89 218-319 13-101 (154)
20 1ri0_A Hepatoma-derived growth 99.8 4.1E-21 1.4E-25 182.4 6.2 87 216-318 14-100 (110)
21 2l89_A PWWP domain-containing 99.8 1.7E-21 5.8E-26 184.6 3.0 89 220-319 4-95 (108)
22 1khc_A DNA cytosine-5 methyltr 99.8 1.2E-20 4.1E-25 187.7 6.1 88 219-319 9-96 (147)
23 2gfu_A DNA mismatch repair pro 99.8 3E-20 1E-24 182.7 7.7 94 219-320 20-115 (134)
24 3rq4_A Histone-lysine N-methyl 99.8 1.1E-20 3.9E-25 202.8 5.1 130 875-1016 100-234 (247)
25 3pfs_A Bromodomain and PHD fin 99.8 1.4E-19 4.7E-24 179.9 5.5 93 220-319 35-147 (158)
26 1h3z_A Hypothetical 62.8 kDa p 99.8 1.9E-19 6.6E-24 170.9 5.6 91 218-319 3-98 (109)
27 3ep0_A PR domain zinc finger p 99.7 3E-17 1E-21 167.2 11.9 112 876-999 25-148 (170)
28 3l42_A Peregrin; transcription 99.7 1.4E-17 4.7E-22 160.7 7.0 69 220-294 4-92 (130)
29 3dal_A PR domain zinc finger p 99.7 8.4E-17 2.9E-21 167.0 7.3 124 875-1018 55-189 (196)
30 3db5_A PR domain zinc finger p 99.7 2.4E-16 8.1E-21 158.0 10.2 115 875-999 20-144 (151)
31 3ray_A PR domain-containing pr 99.5 4.5E-14 1.5E-18 149.7 7.5 124 875-1018 69-202 (237)
32 3ihx_A PR domain zinc finger p 99.3 5.1E-13 1.8E-17 133.8 5.1 103 878-998 23-142 (152)
33 3lqh_A Histone-lysine N-methyl 99.3 3.1E-13 1.1E-17 139.0 3.0 61 404-464 1-66 (183)
34 2lq6_A Bromodomain-containing 99.3 1.1E-12 3.9E-17 119.3 4.2 71 688-758 9-86 (87)
35 1we9_A PHD finger family prote 99.1 2.5E-11 8.5E-16 104.1 3.7 58 403-464 4-61 (64)
36 1wep_A PHF8; structural genomi 99.0 4.4E-10 1.5E-14 100.5 5.2 56 404-464 11-66 (79)
37 3v43_A Histone acetyltransfera 98.9 1.6E-09 5.5E-14 103.1 6.1 55 405-459 5-62 (112)
38 2vpb_A Hpygo1, pygopus homolog 98.9 2.4E-10 8.3E-15 98.4 -0.1 52 406-459 9-64 (65)
39 2xb1_A Pygopus homolog 2, B-ce 98.9 4.1E-10 1.4E-14 106.0 1.4 56 406-463 4-63 (105)
40 3n71_A Histone lysine methyltr 98.8 3E-09 1E-13 125.4 8.5 64 951-1016 201-280 (490)
41 2kgg_A Histone demethylase jar 98.8 2.1E-09 7.2E-14 88.5 3.9 48 407-459 4-52 (52)
42 2kwj_A Zinc finger protein DPF 98.8 3.2E-09 1.1E-13 101.4 5.2 45 595-642 61-107 (114)
43 1wem_A Death associated transc 98.7 1.2E-09 4.1E-14 96.9 -0.1 55 405-463 16-72 (76)
44 1wee_A PHD finger family prote 98.7 5.3E-09 1.8E-13 91.8 2.4 52 405-462 16-67 (72)
45 2ku3_A Bromodomain-containing 98.7 6.6E-09 2.3E-13 91.0 2.4 52 590-642 14-65 (71)
46 3o70_A PHD finger protein 13; 98.6 7.2E-09 2.5E-13 90.0 2.4 49 404-460 18-66 (68)
47 3kqi_A GRC5, PHD finger protei 98.6 5.2E-09 1.8E-13 92.6 1.0 55 405-464 10-64 (75)
48 2ysm_A Myeloid/lymphoid or mix 98.6 5.3E-08 1.8E-12 92.3 8.0 48 594-644 56-105 (111)
49 2k16_A Transcription initiatio 98.6 6.2E-09 2.1E-13 92.0 1.1 53 405-463 18-70 (75)
50 2l43_A N-teminal domain from h 98.6 1.5E-08 5.1E-13 92.4 1.9 52 590-642 23-74 (88)
51 3o7a_A PHD finger protein 13 v 98.5 4.5E-08 1.5E-12 80.5 2.2 44 410-460 8-51 (52)
52 1wew_A DNA-binding family prot 98.5 3E-08 1E-12 88.4 1.2 54 405-462 16-73 (78)
53 2rsd_A E3 SUMO-protein ligase 98.5 3.9E-08 1.3E-12 85.4 1.6 51 407-461 12-65 (68)
54 3qwp_A SET and MYND domain-con 98.4 6.2E-08 2.1E-12 112.3 3.5 61 949-1016 200-268 (429)
55 1wen_A Inhibitor of growth fam 98.4 1.3E-07 4.5E-12 82.7 4.4 49 404-462 15-66 (71)
56 2ysm_A Myeloid/lymphoid or mix 98.4 2.4E-07 8.3E-12 87.8 6.6 81 589-727 4-87 (111)
57 3c6w_A P28ING5, inhibitor of g 98.4 4.5E-08 1.5E-12 82.6 1.2 48 404-461 8-58 (59)
58 1weu_A Inhibitor of growth fam 98.4 1.3E-07 4.4E-12 86.5 4.0 49 404-462 35-86 (91)
59 2g6q_A Inhibitor of growth pro 98.4 6.5E-08 2.2E-12 82.5 1.3 49 404-462 10-61 (62)
60 2yt5_A Metal-response element- 98.4 1.1E-07 3.7E-12 81.9 2.4 54 590-644 4-62 (66)
61 2ri7_A Nucleosome-remodeling f 98.4 4.6E-08 1.6E-12 99.8 -0.0 55 403-462 6-60 (174)
62 2vnf_A ING 4, P29ING4, inhibit 98.3 1.2E-07 4.1E-12 80.3 1.1 48 404-461 9-59 (60)
63 3qww_A SET and MYND domain-con 98.3 2E-07 6.7E-12 108.3 2.8 57 950-1011 201-265 (433)
64 2lv9_A Histone-lysine N-methyl 98.3 5.4E-07 1.9E-11 83.7 4.9 45 410-461 32-76 (98)
65 4gne_A Histone-lysine N-methyl 98.3 1.1E-06 3.7E-11 82.8 6.6 47 589-641 12-60 (107)
66 1wev_A Riken cDNA 1110020M19; 98.2 4E-07 1.4E-11 83.0 2.8 52 591-643 15-72 (88)
67 1mm2_A MI2-beta; PHD, zinc fin 98.2 7.6E-07 2.6E-11 75.6 4.2 51 587-643 4-56 (61)
68 2kwj_A Zinc finger protein DPF 98.2 6.5E-07 2.2E-11 85.4 3.9 77 593-726 2-90 (114)
69 2jmi_A Protein YNG1, ING1 homo 98.1 6.5E-07 2.2E-11 81.7 2.4 47 404-460 25-75 (90)
70 3pur_A Lysine-specific demethy 98.1 1.2E-06 4E-11 102.3 5.0 86 365-462 10-95 (528)
71 1ufn_A Putative nuclear protei 98.1 5.3E-07 1.8E-11 82.0 1.4 67 486-554 12-82 (94)
72 3v43_A Histone acetyltransfera 98.1 1.1E-06 3.8E-11 83.5 3.6 80 591-727 4-95 (112)
73 1oqj_A Glucocorticoid modulato 98.1 6.2E-07 2.1E-11 82.2 1.5 65 488-554 7-75 (97)
74 2lri_C Autoimmune regulator; Z 98.1 1.7E-06 5.7E-11 74.7 3.9 48 590-643 10-59 (66)
75 1h5p_A Nuclear autoantigen SP1 98.1 5.1E-07 1.7E-11 82.2 0.4 65 488-554 9-77 (95)
76 3kv5_D JMJC domain-containing 98.1 6.7E-07 2.3E-11 104.9 1.4 54 405-463 37-90 (488)
77 1x4i_A Inhibitor of growth pro 98.1 4.7E-07 1.6E-11 79.0 -0.2 48 405-462 6-56 (70)
78 1xwh_A Autoimmune regulator; P 98.1 1.2E-06 4.2E-11 75.4 2.2 49 590-644 6-56 (66)
79 1f62_A Transcription factor WS 98.0 1.7E-06 5.9E-11 70.6 2.6 46 594-642 2-49 (51)
80 3kv4_A PHD finger protein 8; e 98.0 5.2E-07 1.8E-11 104.5 -1.1 51 410-464 9-59 (447)
81 4bbq_A Lysine-specific demethy 98.0 1.8E-06 6.2E-11 82.4 2.8 60 402-461 53-114 (117)
82 1fp0_A KAP-1 corepressor; PHD 98.0 4.9E-06 1.7E-10 75.5 4.9 49 589-643 22-72 (88)
83 2puy_A PHD finger protein 21A; 97.9 3.1E-06 1.1E-10 71.5 2.3 47 590-642 3-51 (60)
84 2yql_A PHD finger protein 21A; 97.9 4.6E-06 1.6E-10 69.5 3.1 47 590-642 7-55 (56)
85 1f62_A Transcription factor WS 97.9 6.8E-06 2.3E-10 67.0 3.3 49 407-461 2-50 (51)
86 2e6r_A Jumonji/ARID domain-con 97.8 4.6E-06 1.6E-10 76.6 1.9 49 591-642 15-65 (92)
87 2l5u_A Chromodomain-helicase-D 97.8 6.9E-06 2.4E-10 69.7 2.5 46 591-642 10-57 (61)
88 2e6s_A E3 ubiquitin-protein li 97.7 2.2E-05 7.6E-10 69.7 4.5 49 591-642 25-76 (77)
89 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.7 1E-05 3.6E-10 78.1 1.9 42 422-463 1-46 (140)
90 3asl_A E3 ubiquitin-protein li 97.6 2.4E-05 8.1E-10 68.2 3.4 46 594-642 20-68 (70)
91 2e6s_A E3 ubiquitin-protein li 97.6 5.2E-05 1.8E-09 67.3 5.5 48 407-460 28-76 (77)
92 3o36_A Transcription intermedi 97.6 3.6E-05 1.2E-09 79.2 4.3 48 591-644 3-52 (184)
93 3u5n_A E3 ubiquitin-protein li 97.6 3.7E-05 1.3E-09 80.6 4.2 48 590-643 5-54 (207)
94 3shb_A E3 ubiquitin-protein li 97.6 3.2E-05 1.1E-09 68.6 3.2 46 594-642 28-76 (77)
95 2l5u_A Chromodomain-helicase-D 97.6 3E-05 1E-09 65.7 2.8 48 405-461 11-58 (61)
96 1wen_A Inhibitor of growth fam 97.5 7.6E-05 2.6E-09 65.2 5.2 49 592-645 16-67 (71)
97 1xwh_A Autoimmune regulator; P 97.4 4.2E-05 1.5E-09 65.8 2.2 50 404-462 7-56 (66)
98 2yql_A PHD finger protein 21A; 97.4 5.1E-05 1.7E-09 63.1 2.6 47 405-460 9-55 (56)
99 1mm2_A MI2-beta; PHD, zinc fin 97.4 9.4E-05 3.2E-09 62.7 4.0 48 405-461 9-56 (61)
100 2lri_C Autoimmune regulator; Z 97.4 9.2E-05 3.2E-09 63.8 3.9 48 406-462 13-60 (66)
101 2ro1_A Transcription intermedi 97.4 6.2E-05 2.1E-09 77.9 3.3 46 592-643 2-49 (189)
102 2puy_A PHD finger protein 21A; 97.3 5.6E-05 1.9E-09 63.7 1.6 48 405-461 5-52 (60)
103 2ku3_A Bromodomain-containing 97.3 3.7E-05 1.3E-09 67.2 0.4 53 404-462 15-67 (71)
104 2lv9_A Histone-lysine N-methyl 97.3 0.00028 9.5E-09 65.4 5.7 48 593-643 29-76 (98)
105 2k16_A Transcription initiatio 97.3 0.00011 3.8E-09 64.6 2.7 50 591-642 17-67 (75)
106 1weu_A Inhibitor of growth fam 97.2 0.00021 7.3E-09 65.3 4.6 48 593-645 37-87 (91)
107 2yt5_A Metal-response element- 97.2 8.8E-05 3E-09 63.6 1.9 55 405-461 6-61 (66)
108 2e6r_A Jumonji/ARID domain-con 97.2 7E-05 2.4E-09 68.7 1.4 51 405-461 16-66 (92)
109 3asl_A E3 ubiquitin-protein li 97.2 0.00024 8.1E-09 61.9 4.4 56 392-461 13-69 (70)
110 3ask_A E3 ubiquitin-protein li 97.1 0.00021 7E-09 75.5 3.3 48 592-642 174-224 (226)
111 2jmi_A Protein YNG1, ING1 homo 97.1 0.0002 7E-09 65.3 2.6 46 592-642 26-75 (90)
112 2vnf_A ING 4, P29ING4, inhibit 97.0 0.00016 5.5E-09 61.1 1.5 45 593-642 11-58 (60)
113 3c6w_A P28ING5, inhibitor of g 97.0 0.00019 6.6E-09 60.4 1.7 46 592-642 9-57 (59)
114 4gne_A Histone-lysine N-methyl 97.0 0.00038 1.3E-08 65.5 3.4 45 405-460 15-61 (107)
115 2g6q_A Inhibitor of growth pro 96.9 0.00025 8.7E-09 60.3 1.9 47 592-643 11-60 (62)
116 2l43_A N-teminal domain from h 96.9 8.4E-05 2.9E-09 67.6 -1.2 54 403-462 23-76 (88)
117 3o36_A Transcription intermedi 96.9 0.00065 2.2E-08 69.8 4.7 51 405-464 4-54 (184)
118 3shb_A E3 ubiquitin-protein li 96.8 0.00099 3.4E-08 59.1 4.6 56 391-460 20-76 (77)
119 2lbm_A Transcriptional regulat 96.7 0.00085 2.9E-08 66.1 4.0 89 366-461 13-117 (142)
120 3u5n_A E3 ubiquitin-protein li 96.7 0.00087 3E-08 70.1 4.2 51 405-464 7-57 (207)
121 3o70_A PHD finger protein 13; 96.7 0.00088 3E-08 58.0 3.2 49 591-642 18-66 (68)
122 3ask_A E3 ubiquitin-protein li 96.7 0.001 3.4E-08 70.3 4.3 49 407-461 176-225 (226)
123 1fp0_A KAP-1 corepressor; PHD 96.5 0.0045 1.5E-07 56.2 6.5 49 404-461 24-72 (88)
124 1we9_A PHD finger family prote 96.3 0.0022 7.4E-08 54.5 3.2 52 591-643 5-58 (64)
125 3ql9_A Transcriptional regulat 96.2 0.0036 1.2E-07 60.7 4.6 90 365-461 6-111 (129)
126 2lbm_A Transcriptional regulat 96.1 0.0015 5.1E-08 64.4 1.6 49 589-643 60-117 (142)
127 1wev_A Riken cDNA 1110020M19; 96.0 0.0033 1.1E-07 57.1 3.3 59 404-463 15-74 (88)
128 3qxy_A N-lysine methyltransfer 96.0 0.0042 1.4E-07 72.3 4.8 43 949-996 221-263 (449)
129 2ro1_A Transcription intermedi 95.9 0.0048 1.6E-07 63.7 4.0 49 405-462 2-50 (189)
130 3rsn_A SET1/ASH2 histone methy 95.8 0.0053 1.8E-07 62.4 4.0 49 410-460 9-58 (177)
131 1wew_A DNA-binding family prot 95.8 0.0036 1.2E-07 55.5 2.4 50 592-644 16-73 (78)
132 1wem_A Death associated transc 95.8 0.0013 4.5E-08 57.9 -0.4 49 592-643 16-70 (76)
133 1x4i_A Inhibitor of growth pro 95.8 0.0026 8.9E-08 55.3 1.5 46 593-643 7-55 (70)
134 3o7a_A PHD finger protein 13 v 95.7 0.0043 1.5E-07 50.7 2.4 45 596-642 7-51 (52)
135 3ql9_A Transcriptional regulat 95.7 0.0022 7.6E-08 62.2 0.5 48 589-642 54-110 (129)
136 1wep_A PHF8; structural genomi 95.6 0.0051 1.7E-07 54.6 2.6 50 593-644 13-64 (79)
137 2kgg_A Histone demethylase jar 95.3 0.0062 2.1E-07 49.8 1.8 47 594-641 4-52 (52)
138 2h21_A Ribulose-1,5 bisphospha 95.2 0.008 2.7E-07 69.6 3.0 49 949-997 188-242 (440)
139 1wee_A PHD finger family prote 95.1 0.012 4.2E-07 51.1 3.5 48 593-642 17-65 (72)
140 2vpb_A Hpygo1, pygopus homolog 95.1 0.0042 1.5E-07 53.2 0.5 49 591-641 7-64 (65)
141 3pmi_A PWWP domain-containing 95.0 0.0082 2.8E-07 57.1 2.1 61 219-291 2-62 (134)
142 2xb1_A Pygopus homolog 2, B-ce 94.8 0.0093 3.2E-07 55.9 1.8 50 592-643 3-61 (105)
143 2rsd_A E3 SUMO-protein ligase 94.7 0.015 5.2E-07 50.1 2.8 47 593-642 11-64 (68)
144 2ri7_A Nucleosome-remodeling f 94.5 0.006 2.1E-07 61.8 -0.3 50 591-642 7-58 (174)
145 3smt_A Histone-lysine N-methyl 94.1 0.027 9.3E-07 66.4 4.0 43 950-996 272-314 (497)
146 3kqi_A GRC5, PHD finger protei 93.9 0.014 4.9E-07 51.2 0.9 50 592-642 9-60 (75)
147 3lqh_A Histone-lysine N-methyl 93.2 0.025 8.5E-07 58.1 1.5 52 593-644 3-64 (183)
148 1iym_A EL5; ring-H2 finger, ub 91.8 0.16 5.5E-06 40.7 4.3 50 404-462 4-53 (55)
149 1wil_A KIAA1045 protein; ring 91.5 0.085 2.9E-06 47.0 2.5 56 585-643 8-76 (89)
150 3qii_A PHD finger protein 20; 90.2 0.16 5.3E-06 45.7 2.9 57 218-293 18-74 (85)
151 2ecm_A Ring finger and CHY zin 87.6 0.23 7.8E-06 39.8 2.0 49 405-462 5-53 (55)
152 1v87_A Deltex protein 2; ring- 87.5 0.45 1.5E-05 44.2 4.3 56 405-463 25-93 (114)
153 3pur_A Lysine-specific demethy 87.1 0.29 9.9E-06 57.5 3.2 36 607-642 56-93 (528)
154 2ecl_A Ring-box protein 2; RNF 86.7 0.32 1.1E-05 42.8 2.7 62 391-463 14-75 (81)
155 2ect_A Ring finger protein 126 86.6 0.27 9.2E-06 42.5 2.1 51 404-464 14-64 (78)
156 2kiz_A E3 ubiquitin-protein li 85.0 0.35 1.2E-05 40.7 1.9 52 404-465 13-64 (69)
157 2l0b_A E3 ubiquitin-protein li 84.9 0.19 6.4E-06 45.2 0.2 50 404-463 39-88 (91)
158 1x4j_A Ring finger protein 38; 82.5 0.38 1.3E-05 41.3 1.1 50 404-463 22-71 (75)
159 2ct2_A Tripartite motif protei 81.9 0.33 1.1E-05 42.6 0.5 55 403-463 13-67 (88)
160 2ea6_A Ring finger protein 4; 81.7 0.25 8.4E-06 41.3 -0.4 53 403-462 13-66 (69)
161 2ep4_A Ring finger protein 24; 81.4 0.32 1.1E-05 41.5 0.2 50 404-463 14-63 (74)
162 3kv5_D JMJC domain-containing 80.5 0.33 1.1E-05 57.0 -0.1 48 594-642 38-87 (488)
163 2d8s_A Cellular modulator of i 79.6 0.58 2E-05 41.4 1.3 53 405-464 15-70 (80)
164 1wil_A KIAA1045 protein; ring 79.1 0.39 1.3E-05 42.8 0.0 34 697-730 16-50 (89)
165 3kv4_A PHD finger protein 8; e 78.6 0.25 8.7E-06 57.2 -1.8 48 594-642 6-55 (447)
166 2xeu_A Ring finger protein 4; 78.5 0.25 8.6E-06 40.6 -1.4 52 405-463 3-55 (64)
167 2ct0_A Non-SMC element 1 homol 78.1 1.5 5E-05 38.4 3.3 51 405-466 15-66 (74)
168 2jwo_A RAG-2, V(D)J recombinat 77.8 1 3.4E-05 39.2 2.1 35 423-457 38-75 (82)
169 3qww_A SET and MYND domain-con 77.5 1.7 5.9E-05 50.0 4.8 35 875-909 4-38 (433)
170 3ng2_A RNF4, snurf, ring finge 77.0 0.45 1.5E-05 40.1 -0.2 53 404-463 9-62 (71)
171 3p8d_A Medulloblastoma antigen 76.8 2.1 7.4E-05 36.7 3.9 56 219-293 4-59 (67)
172 2pv0_B DNA (cytosine-5)-methyl 74.3 2 6.7E-05 48.8 3.9 87 364-461 45-148 (386)
173 2f5k_A MORF-related gene 15 is 73.4 1.6 5.5E-05 40.5 2.5 60 220-293 21-80 (102)
174 3dpl_R Ring-box protein 1; ubi 71.8 1.2 4E-05 41.6 1.1 64 391-463 36-100 (106)
175 2y43_A E3 ubiquitin-protein li 71.7 1.5 5.1E-05 39.6 1.8 49 403-463 20-68 (99)
176 3lrq_A E3 ubiquitin-protein li 71.6 0.99 3.4E-05 41.2 0.6 50 403-463 20-69 (100)
177 2ckl_B Ubiquitin ligase protei 71.5 1.2 4.1E-05 44.2 1.2 47 405-462 54-100 (165)
178 2djb_A Polycomb group ring fin 70.1 1.1 3.7E-05 38.1 0.5 48 404-463 14-61 (72)
179 2d8t_A Dactylidin, ring finger 69.7 2.4 8.1E-05 35.9 2.5 46 405-463 15-60 (71)
180 2lcc_A AT-rich interactive dom 69.2 1.8 6.3E-05 38.0 1.8 61 220-292 4-66 (76)
181 4ap4_A E3 ubiquitin ligase RNF 68.7 0.33 1.1E-05 45.7 -3.4 32 425-463 93-124 (133)
182 3a1b_A DNA (cytosine-5)-methyl 68.4 3.5 0.00012 41.1 3.8 83 368-461 37-134 (159)
183 2ysl_A Tripartite motif-contai 67.8 2.8 9.5E-05 35.3 2.6 51 403-463 18-68 (73)
184 1chc_A Equine herpes virus-1 r 66.8 2.1 7.3E-05 35.6 1.6 48 404-463 4-51 (68)
185 2ckl_A Polycomb group ring fin 66.6 2.5 8.4E-05 38.9 2.1 50 402-463 12-61 (108)
186 4a0k_B E3 ubiquitin-protein li 65.2 1.3 4.5E-05 42.1 0.0 63 392-463 48-111 (117)
187 4bbq_A Lysine-specific demethy 64.8 3.4 0.00012 38.7 2.8 37 607-643 73-114 (117)
188 3qwp_A SET and MYND domain-con 63.9 5 0.00017 46.0 4.5 32 877-908 4-35 (429)
189 2csy_A Zinc finger protein 183 63.7 1.7 5.8E-05 37.7 0.4 46 405-463 15-60 (81)
190 2ecn_A Ring finger protein 141 63.4 1.2 4E-05 37.5 -0.7 46 404-463 14-59 (70)
191 2lrq_A Protein MRG15, NUA4 com 66.9 1.5 5.3E-05 39.3 0.0 60 220-293 11-70 (85)
192 2yur_A Retinoblastoma-binding 62.8 2.5 8.5E-05 36.1 1.3 48 404-461 14-61 (74)
193 1e4u_A Transcriptional repress 61.2 6.1 0.00021 34.6 3.5 54 403-464 9-62 (78)
194 3k1l_B Fancl; UBC, ring, RWD, 61.2 4.1 0.00014 45.6 3.0 58 406-463 309-372 (381)
195 4ayc_A E3 ubiquitin-protein li 60.8 2.9 9.9E-05 40.3 1.5 45 406-463 54-98 (138)
196 2ecv_A Tripartite motif-contai 60.7 2.3 8E-05 36.6 0.8 53 404-463 18-70 (85)
197 2l7p_A Histone-lysine N-methyl 59.5 2.9 0.0001 38.7 1.2 16 420-435 25-40 (100)
198 2cup_A Skeletal muscle LIM-pro 59.3 7.8 0.00027 34.8 4.1 49 364-417 30-78 (101)
199 1g25_A CDK-activating kinase a 58.4 2.3 8E-05 35.2 0.3 51 405-463 3-54 (65)
200 2egp_A Tripartite motif-contai 55.9 4.3 0.00015 34.6 1.7 54 404-463 11-64 (79)
201 2ku7_A MLL1 PHD3-CYP33 RRM chi 55.9 3.3 0.00011 39.1 0.9 38 609-646 2-47 (140)
202 2ecy_A TNF receptor-associated 55.2 3.5 0.00012 34.2 0.9 48 404-463 14-61 (66)
203 2jne_A Hypothetical protein YF 55.0 2 6.9E-05 39.3 -0.7 37 368-413 33-69 (101)
204 2i13_A AART; DNA binding, zinc 53.9 3.6 0.00012 40.8 0.9 68 366-434 20-116 (190)
205 3sd4_A PHD finger protein 20; 53.2 15 0.0005 31.4 4.5 57 219-290 10-68 (69)
206 3l11_A E3 ubiquitin-protein li 52.4 7.3 0.00025 36.0 2.7 47 405-463 15-61 (115)
207 1jm7_A BRCA1, breast cancer ty 51.7 5.4 0.00018 36.4 1.7 51 403-463 19-69 (112)
208 2jtn_A LIM domain-binding prot 51.3 18 0.00061 36.3 5.6 73 364-461 84-156 (182)
209 2vut_I AREA, nitrogen regulato 51.1 6.6 0.00023 30.8 1.8 34 368-405 2-35 (43)
210 3smt_A Histone-lysine N-methyl 50.8 9.9 0.00034 44.6 4.1 31 878-908 93-123 (497)
211 2eqm_A PHD finger protein 20-l 50.0 15 0.00051 33.1 4.2 61 218-293 16-78 (88)
212 1t1h_A Gspef-atpub14, armadill 49.2 6.4 0.00022 33.6 1.6 48 404-463 7-54 (78)
213 1gnf_A Transcription factor GA 48.8 12 0.00039 29.8 2.9 35 366-404 3-37 (46)
214 3fl2_A E3 ubiquitin-protein li 48.4 5.8 0.0002 37.3 1.3 48 404-463 51-98 (124)
215 2ecw_A Tripartite motif-contai 47.9 4.3 0.00015 34.8 0.3 53 404-463 18-70 (85)
216 3m9p_A MALE-specific lethal 3 47.8 9.1 0.00031 35.9 2.5 66 220-293 18-87 (110)
217 2ro0_A Histone acetyltransfera 47.0 16 0.00055 33.2 3.9 61 214-288 16-76 (92)
218 2xqn_T Testin, TESS; metal-bin 46.6 17 0.00057 34.0 4.2 48 364-417 27-75 (126)
219 2i13_A AART; DNA binding, zinc 46.1 3.8 0.00013 40.6 -0.4 95 366-463 48-172 (190)
220 3s6w_A Tudor domain-containing 46.0 20 0.00068 28.8 4.0 53 221-289 1-53 (54)
221 6rxn_A Rubredoxin; electron tr 45.8 7.8 0.00027 30.8 1.5 35 406-461 5-39 (46)
222 2ct0_A Non-SMC element 1 homol 44.8 5.6 0.00019 34.7 0.5 30 697-726 16-45 (74)
223 2ecj_A Tripartite motif-contai 44.5 7 0.00024 31.1 1.1 45 404-458 14-58 (58)
224 2e61_A Zinc finger CW-type PWW 44.2 9.1 0.00031 33.0 1.8 16 420-435 15-32 (69)
225 2k3y_A Chromatin modification- 44.2 10 0.00036 36.8 2.4 67 221-293 9-105 (136)
226 2fnf_X Putative RAS effector N 44.2 15 0.00052 31.7 3.2 34 402-439 32-65 (72)
227 3nw0_A Non-structural maintena 43.9 15 0.00052 38.9 3.9 52 405-466 180-231 (238)
228 1bor_A Transcription factor PM 43.1 26 0.00088 28.1 4.3 44 405-464 6-49 (56)
229 3qxy_A N-lysine methyltransfer 42.8 16 0.00056 42.1 4.2 33 877-909 37-70 (449)
230 3dfx_A Trans-acting T-cell-spe 42.7 13 0.00044 31.6 2.4 37 366-406 6-42 (63)
231 3m9q_A Protein MALE-specific l 42.6 13 0.00043 34.5 2.6 67 220-293 18-87 (101)
232 2rgt_A Fusion of LIM/homeobox 42.5 26 0.00088 34.7 5.1 72 364-460 30-101 (169)
233 3oa6_A MALE-specific lethal 3 41.9 9.6 0.00033 35.8 1.7 67 220-293 18-87 (110)
234 2dlq_A GLI-kruppel family memb 41.9 11 0.00037 34.1 2.1 87 365-463 5-105 (124)
235 2ysj_A Tripartite motif-contai 41.9 7.4 0.00025 31.8 0.8 46 403-458 18-63 (63)
236 1rut_X Flinc4, fusion protein 40.7 10 0.00034 38.4 1.8 66 364-437 29-97 (188)
237 2d8s_A Cellular modulator of i 40.5 12 0.00041 32.9 2.0 52 591-644 14-68 (80)
238 2ldm_A Uncharacterized protein 46.5 5.9 0.0002 35.3 0.0 57 218-293 3-59 (81)
239 2equ_A PHD finger protein 20-l 40.2 30 0.001 30.1 4.5 56 219-293 7-62 (74)
240 2rnz_A Histone acetyltransfera 39.8 20 0.00069 32.7 3.4 61 214-288 18-78 (94)
241 2dkt_A Ring finger and CHY zin 39.7 12 0.00042 36.7 2.1 73 367-459 27-105 (143)
242 1z6u_A NP95-like ring finger p 38.4 10 0.00035 37.1 1.4 48 405-464 78-125 (150)
243 4ap4_A E3 ubiquitin ligase RNF 38.0 6.5 0.00022 36.7 -0.1 53 404-463 6-59 (133)
244 1b8t_A Protein (CRP1); LIM dom 37.4 33 0.0011 34.6 5.1 43 364-412 31-74 (192)
245 2kae_A GATA-type transcription 37.3 18 0.00061 31.4 2.5 37 365-404 6-42 (71)
246 1mhn_A SurviVal motor neuron p 36.1 40 0.0014 27.6 4.4 55 220-290 2-56 (59)
247 2d9t_A Tudor domain-containing 35.8 41 0.0014 29.3 4.7 59 219-293 7-65 (78)
248 1faq_A RAF-1; transferase, ser 35.7 17 0.00058 28.8 2.0 32 403-439 12-43 (52)
249 2enz_A NPKC-theta, protein kin 35.6 29 0.001 29.0 3.6 37 402-439 20-56 (65)
250 3ztg_A E3 ubiquitin-protein li 35.6 13 0.00045 32.6 1.5 48 405-462 13-60 (92)
251 3k1l_B Fancl; UBC, ring, RWD, 35.3 13 0.00044 41.7 1.7 33 592-624 308-343 (381)
252 2xjy_A Rhombotin-2; oncoprotei 35.3 26 0.0009 32.8 3.7 75 364-461 26-103 (131)
253 1ptq_A Protein kinase C delta 34.6 18 0.00062 28.3 2.0 37 402-439 8-44 (50)
254 2jrp_A Putative cytoplasmic pr 34.1 9.2 0.00032 34.0 0.2 37 368-413 3-39 (81)
255 1x4j_A Ring finger protein 38; 34.0 16 0.00054 30.9 1.7 51 589-644 20-70 (75)
256 4gat_A Nitrogen regulatory pro 33.9 15 0.00052 31.4 1.5 35 366-404 8-42 (66)
257 2eli_A Protein kinase C alpha 33.1 33 0.0011 30.3 3.7 37 402-439 25-61 (85)
258 1jm7_B BARD1, BRCA1-associated 32.6 25 0.00084 32.6 3.0 47 402-462 19-65 (117)
259 3h8z_A FragIle X mental retard 32.2 29 0.00098 33.4 3.3 57 220-293 59-120 (128)
260 4a4f_A SurviVal of motor neuro 32.2 45 0.0016 27.8 4.2 57 220-292 7-63 (64)
261 3hct_A TNF receptor-associated 32.0 9 0.00031 35.7 -0.2 47 404-462 17-63 (118)
262 1y8f_A UNC-13 homolog A, MUNC1 31.8 24 0.00081 29.7 2.4 38 401-439 20-57 (66)
263 3rsn_A SET1/ASH2 histone methy 31.8 33 0.0011 34.8 3.9 61 598-665 10-75 (177)
264 3fdr_A Tudor and KH domain-con 31.5 59 0.002 28.9 5.2 62 219-297 25-86 (94)
265 2co8_A NEDD9 interacting prote 31.4 36 0.0012 29.4 3.7 41 365-408 13-58 (82)
266 3gox_A Restriction endonucleas 31.3 17 0.00057 37.3 1.6 52 365-416 73-148 (200)
267 1rfh_A RAS association (ralgds 31.3 17 0.00057 30.1 1.3 33 403-439 20-52 (59)
268 2yt9_A Zinc finger-containing 31.2 30 0.001 29.6 3.1 13 451-463 64-76 (95)
269 1rmd_A RAG1; V(D)J recombinati 30.1 13 0.00043 34.4 0.4 49 403-463 21-69 (116)
270 2yuu_A NPKC-delta, protein kin 30.1 33 0.0011 30.1 3.2 38 401-439 24-61 (83)
271 3nw0_A Non-structural maintena 29.5 16 0.00054 38.7 1.1 31 696-726 180-210 (238)
272 3pfq_A PKC-B, PKC-beta, protei 29.0 18 0.00063 43.7 1.8 31 697-727 114-148 (674)
273 1zbd_B Rabphilin-3A; G protein 28.9 32 0.0011 33.3 3.0 53 590-642 53-106 (134)
274 3a1b_A DNA (cytosine-5)-methyl 28.9 11 0.00039 37.5 -0.1 47 591-642 78-133 (159)
275 2dmd_A Zinc finger protein 64, 28.6 35 0.0012 29.2 3.1 14 450-463 62-75 (96)
276 2eko_A Histone acetyltransfera 28.4 46 0.0016 29.9 3.8 60 217-288 5-67 (87)
277 1wgs_A MYST histone acetyltran 28.1 29 0.001 33.5 2.7 57 220-287 11-67 (133)
278 1gh9_A 8.3 kDa protein (gene M 27.5 21 0.00072 30.9 1.3 27 408-436 7-33 (71)
279 2h21_A Ribulose-1,5 bisphospha 27.4 34 0.0012 39.0 3.5 22 888-909 32-53 (440)
280 2zet_C Melanophilin; complex, 26.9 28 0.00096 34.5 2.3 51 590-642 66-116 (153)
281 2enn_A NPKC-theta, protein kin 26.9 36 0.0012 29.5 2.7 38 401-439 30-67 (77)
282 2diq_A Tudor and KH domain-con 26.7 86 0.0029 28.7 5.5 63 218-297 29-91 (110)
283 1weq_A PHD finger protein 7; s 25.9 74 0.0025 28.5 4.6 44 597-642 30-78 (85)
284 3uej_A NPKC-delta, protein kin 25.9 30 0.001 28.8 2.0 37 402-439 17-53 (65)
285 1wvo_A Sialic acid synthase; a 25.2 24 0.00084 30.9 1.4 18 976-993 7-24 (79)
286 4b6d_A RAC GTPase-activating p 25.2 28 0.00096 29.1 1.7 34 404-439 18-51 (61)
287 2ee8_A Protein ODD-skipped-rel 25.0 37 0.0013 29.7 2.6 18 364-381 14-31 (106)
288 1g5v_A SurviVal motor neuron p 24.6 75 0.0026 28.5 4.5 57 220-292 9-65 (88)
289 4hcz_A PHD finger protein 1; p 24.1 76 0.0026 26.4 3.9 53 220-290 2-54 (58)
290 4a0k_B E3 ubiquitin-protein li 24.1 19 0.00064 34.1 0.4 50 591-643 47-109 (117)
291 2ea5_A Cell growth regulator w 24.0 1E+02 0.0035 25.8 5.0 24 389-415 33-56 (68)
292 2lq6_A Bromodomain-containing 23.5 32 0.0011 30.8 1.8 32 406-441 18-51 (87)
293 1weo_A Cellulose synthase, cat 23.3 28 0.00094 31.5 1.3 55 404-464 15-70 (93)
294 2enn_A NPKC-theta, protein kin 23.3 50 0.0017 28.6 3.0 35 592-626 34-68 (77)
295 2yrv_A AT-rich interactive dom 23.3 1.4E+02 0.0047 28.3 6.1 88 220-325 9-98 (117)
296 1ptq_A Protein kinase C delta 22.9 38 0.0013 26.5 2.0 33 593-626 12-45 (50)
297 1yop_A KTI11P; zinc finger, me 22.6 31 0.0011 30.8 1.5 23 419-441 41-63 (83)
298 2dig_A Lamin-B receptor; tudor 22.5 44 0.0015 28.5 2.3 28 218-246 9-37 (68)
299 1faq_A RAF-1; transferase, ser 22.5 50 0.0017 26.0 2.6 31 592-626 14-44 (52)
300 1v87_A Deltex protein 2; ring- 22.3 21 0.00073 32.6 0.4 55 591-645 24-93 (114)
301 2l8d_A Lamin-B receptor; DNA b 22.1 45 0.0015 28.3 2.3 28 218-246 6-34 (66)
302 2pk7_A Uncharacterized protein 21.5 41 0.0014 28.9 2.0 30 407-436 10-39 (69)
303 2enz_A NPKC-theta, protein kin 21.0 57 0.0019 27.2 2.8 34 593-626 24-57 (65)
304 2yuu_A NPKC-delta, protein kin 20.9 61 0.0021 28.4 3.1 34 592-626 28-62 (83)
305 3pnw_C Tudor domain-containing 20.9 91 0.0031 27.1 4.1 56 221-292 17-72 (77)
306 1kbe_A Kinase suppressor of RA 20.7 53 0.0018 26.3 2.3 29 406-439 15-43 (49)
307 2hf1_A Tetraacyldisaccharide-1 20.6 37 0.0013 29.1 1.5 30 407-436 10-39 (68)
308 1r79_A Diacylglycerol kinase, 20.5 47 0.0016 29.6 2.2 34 405-438 38-71 (84)
309 3ttc_A HYPF, transcriptional r 20.4 47 0.0016 40.3 3.0 46 366-412 38-96 (657)
310 4rxn_A Rubredoxin; electron tr 20.4 58 0.002 26.7 2.6 42 405-461 3-45 (54)
311 2ko5_A Ring finger protein Z; 20.3 42 0.0014 30.7 1.8 41 369-415 30-71 (99)
312 2js4_A UPF0434 protein BB2007; 20.3 37 0.0013 29.3 1.5 33 407-440 10-42 (70)
313 2jr6_A UPF0434 protein NMA0874 20.2 39 0.0013 29.0 1.6 30 407-436 10-39 (68)
314 3knv_A TNF receptor-associated 20.1 15 0.00052 35.6 -1.1 47 404-462 30-76 (141)
No 1
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00 E-value=1.3e-36 Score=316.12 Aligned_cols=155 Identities=45% Similarity=0.857 Sum_probs=140.3
Q ss_pred hhHHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCCeEEEe
Q 036712 864 SFKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVID 943 (1020)
Q Consensus 864 ~~~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~~~vID 943 (1020)
.+.+|++++|++...+|.|++++++||||||+++|++|++|+||+|+|++..+++.|+..|+..+.++|+|.++..++||
T Consensus 38 ~~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~l~~~~~ID 117 (192)
T 2w5y_A 38 PMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVD 117 (192)
T ss_dssp CHHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEECSSSEEEE
T ss_pred CcchhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeeeecCceEEE
Confidence 46788889999999999999999999999999999999999999999999999999988888877789999999999999
Q ss_pred cccCCCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCCCeeeecCCcCcccccC
Q 036712 944 ATNKGNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMFMN 1020 (1020)
Q Consensus 944 a~~~GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~~~~C~CGs~~CRg~ln 1020 (1020)
|+..||++|||||||+|||.++.+.+++ ..+|+|+|+|||++||||||||++..+.. ...|.|.||+++|||+||
T Consensus 118 a~~~Gn~arfiNHSC~PN~~~~~~~~~g-~~~i~i~A~rdI~~GEELt~dY~~~~~~~-~~~~~C~Cgs~~Crg~ln 192 (192)
T 2w5y_A 118 ATMHGNAARFINHSCEPNCYSRVINIDG-QKHIVIFAMRKIYRGEELTYDYKFPIEDA-SNKLPCNCGAKKCRKFLN 192 (192)
T ss_dssp CTTTCCGGGGCEECSSCSEEEEEEEETT-EEEEEEEESSCBCTTCEEEECCCC--------CCBCCCCCTTCCSBCC
T ss_pred CccccChhHhhccCCCCCEEEEEEEECC-cEEEEEEECcccCCCCEEEEEcCCchhcC-CCCceeECCCCCCcCcCC
Confidence 9999999999999999999999888875 78999999999999999999999886543 357899999999999999
No 2
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=5.1e-35 Score=313.05 Aligned_cols=170 Identities=29% Similarity=0.507 Sum_probs=149.4
Q ss_pred ccccccccccCCcccch--hhHHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHh
Q 036712 847 VISLNTYKEVDKPEIFS--SFKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQY 924 (1020)
Q Consensus 847 ~~~l~~~~~~~~~~~~~--~~~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y 924 (1020)
..++|+...+++....+ ...++|+.+|++..++|+|++++++||||||+++|++|++|+||+|+|++..+++.|...+
T Consensus 59 ~~C~nr~~~~EC~~~~C~c~~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~ 138 (232)
T 3ooi_A 59 SECINRMLLYECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYA 138 (232)
T ss_dssp SCCHHHHTTBCCCTTTCTTGGGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHH
T ss_pred CCCcCcCceeEeCCCCCCCCCCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHH
Confidence 35777777666654322 3467788899999999999999999999999999999999999999999999998887766
Q ss_pred hhcC-CceEEEEeCCeEEEecccCCCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCC
Q 036712 925 RKEG-KDCYLFKISEEVVIDATNKGNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDE 1003 (1020)
Q Consensus 925 ~~~~-~~~Y~f~i~~~~vIDa~~~GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~ 1003 (1020)
...+ ...|+|.++.+++|||+..||++|||||||+|||.++.+.+++ ..+|+|||+|||++||||||||+++.+..
T Consensus 139 ~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~-~~~i~~~A~RdI~~GEELT~dY~~~~~~~-- 215 (232)
T 3ooi_A 139 QEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNG-DTRVGLFALSDIKAGTELTFNYNLECLGN-- 215 (232)
T ss_dssp HHTTCCCCCEEEEETTEEEEEEEEECGGGGCEECSSCSEEEEEEEETT-EEEEEEEESSCBCTTCBCEECCTTCSTTC--
T ss_pred hhcCCCceeeeecCcceEEeccccccccccccccCCCCeEEEEEEECC-ceEEEEEECCccCCCCEEEEECCCCcCCC--
Confidence 5443 4679999999999999999999999999999999999988876 78999999999999999999999987543
Q ss_pred CCeeeecCCcCccccc
Q 036712 1004 LKVPCLCKAPNCRMFM 1019 (1020)
Q Consensus 1004 ~~~~C~CGs~~CRg~l 1019 (1020)
.+|.|+||+++|||+|
T Consensus 216 ~~~~C~CGs~~CrG~l 231 (232)
T 3ooi_A 216 GKTVCKCGAPNCSGFL 231 (232)
T ss_dssp TTCBCCCCCTTCCSBC
T ss_pred CCcEeECCCCcCcCcC
Confidence 4689999999999998
No 3
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=7.5e-35 Score=309.87 Aligned_cols=171 Identities=30% Similarity=0.424 Sum_probs=147.9
Q ss_pred cccccccccCCcccc--hhhHHHHHHhhccCcc-cEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHh
Q 036712 848 ISLNTYKEVDKPEIF--SSFKERLYHLQRTEKH-RVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQY 924 (1020)
Q Consensus 848 ~~l~~~~~~~~~~~~--~~~~~r~~~~q~~~~~-~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y 924 (1020)
.++|++..+++.... +...+.++.+|++... +|+|.+++++||||||+++|++|++|+||+|+|++..++..|....
T Consensus 41 ~C~nr~~~~EC~~~~C~C~~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~ 120 (222)
T 3ope_A 41 DCLNRMIFAECSPNTCPCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQ 120 (222)
T ss_dssp CCTTGGGTBCCCTTTCTTTTSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHT
T ss_pred cCcCcCeEeEeCCCCCcCCCCCCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHH
Confidence 678887777765422 2445778888998765 5999999999999999999999999999999999999888776554
Q ss_pred hhcCCceEEEEeCCeEEEecccCCCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCC
Q 036712 925 RKEGKDCYLFKISEEVVIDATNKGNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDEL 1004 (1020)
Q Consensus 925 ~~~~~~~Y~f~i~~~~vIDa~~~GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~ 1004 (1020)
.......|+|.++.+++|||+..||++|||||||+|||.++.+.+++ ..+|+|||+|||++||||||||+++.+... .
T Consensus 121 ~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~-~~~i~~~A~RdI~~GEELT~dY~~~~~~~~-~ 198 (222)
T 3ope_A 121 YHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNG-VYRIGLYALKDMPAGTELTYDYNFHSFNVE-K 198 (222)
T ss_dssp STTCCSCCEEEEETTEEEECSSEECGGGGCEECSSCSEEEEEEEETT-EEEEEEEESSCBCTTCBCEECTTSSBCCCS-C
T ss_pred hcccCCeEEEecCCCEEEeCccccccceeeccCCCCCeEeEEEEECC-eEEEEEEECCccCCCCEEEEECCCcccCCc-C
Confidence 44455779999999999999999999999999999999999988875 789999999999999999999999876543 4
Q ss_pred CeeeecCCcCcccccC
Q 036712 1005 KVPCLCKAPNCRMFMN 1020 (1020)
Q Consensus 1005 ~~~C~CGs~~CRg~ln 1020 (1020)
.+.|+||+++|||+|.
T Consensus 199 ~~~C~CGs~~Crg~i~ 214 (222)
T 3ope_A 199 QQLCKCGFEKCRGIIG 214 (222)
T ss_dssp CCBCCCCCTTCCSBCC
T ss_pred CCEeeCCCcCCCCccC
Confidence 6899999999999983
No 4
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=1.1e-34 Score=317.62 Aligned_cols=171 Identities=29% Similarity=0.505 Sum_probs=151.2
Q ss_pred ccccccccccCCcccc-hhhHHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhh
Q 036712 847 VISLNTYKEVDKPEIF-SSFKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYR 925 (1020)
Q Consensus 847 ~~~l~~~~~~~~~~~~-~~~~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~ 925 (1020)
..++|+...+++...+ +...++|+.+|++...+|+|..++++||||||+++|++|++|+||+|+||+..+++.|...|.
T Consensus 85 ~~C~nr~~~~EC~~~C~C~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~ 164 (278)
T 3h6l_A 85 EDCLNRLLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYA 164 (278)
T ss_dssp TTCTTGGGTBCCCTTCTTGGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHHHH
T ss_pred CCCCCcceEeccCCCCCcCCCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHHHH
Confidence 3688887766765432 234577888999999999999999999999999999999999999999999999999988886
Q ss_pred hc-CCceEEEEeCCeEEEecccCCCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCC
Q 036712 926 KE-GKDCYLFKISEEVVIDATNKGNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDEL 1004 (1020)
Q Consensus 926 ~~-~~~~Y~f~i~~~~vIDa~~~GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~ 1004 (1020)
.. ..+.|++.++.+++|||+..||++|||||||+|||.++.+.+++ ..+|+|||+|||++||||||||+++.+. ..
T Consensus 165 ~~~~~~~y~~~l~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g-~~ri~~fA~RdI~~GEELT~dY~~~~~~--~~ 241 (278)
T 3h6l_A 165 RNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNG-QLRVGFFTTKLVPSGSELTFDYQFQRYG--KE 241 (278)
T ss_dssp HTTCCCCCEEEEETTEEEECSSEECGGGGCEECSSCSEEEEEEEETT-EEEEEEEESSCBCTTCBCEECCTTTEEC--SS
T ss_pred hccCccceeecccCCeEEeCcccCChhhhcccCCCCCceeEEEEeCC-ceEEEEEECCccCCCCEEEEecCCCcCC--CC
Confidence 54 45678889999999999999999999999999999999998876 7899999999999999999999998754 34
Q ss_pred CeeeecCCcCcccccC
Q 036712 1005 KVPCLCKAPNCRMFMN 1020 (1020)
Q Consensus 1005 ~~~C~CGs~~CRg~ln 1020 (1020)
.+.|+||+++|||+|.
T Consensus 242 ~~~C~CGs~~Crg~l~ 257 (278)
T 3h6l_A 242 AQKCFCGSANCRGYLG 257 (278)
T ss_dssp CEECCCCCTTCCSEEC
T ss_pred CcEeECCCCCCeeecC
Confidence 6999999999999973
No 5
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=99.98 E-value=9e-33 Score=304.49 Aligned_cols=155 Identities=30% Similarity=0.486 Sum_probs=134.3
Q ss_pred hHHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCC------
Q 036712 865 FKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISE------ 938 (1020)
Q Consensus 865 ~~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~------ 938 (1020)
..++|+.+|++...+|.|++++++||||||+++|++|++|+||+||||+..+++.|...+.. ....|+|.++.
T Consensus 113 ~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~-~~~~Y~~~l~~~~~~~~ 191 (290)
T 3bo5_A 113 DHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTK-SDSNYIIAIREHVYNGQ 191 (290)
T ss_dssp TTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCS-SCCCCCEEEEECC----
T ss_pred CCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcc-cCCcceeeecccccCCc
Confidence 35777889999999999999999999999999999999999999999999998887665433 23568888742
Q ss_pred --eEEEecccCCCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCC-----------CCCC
Q 036712 939 --EVVIDATNKGNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEH-----------DELK 1005 (1020)
Q Consensus 939 --~~vIDa~~~GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~-----------~~~~ 1005 (1020)
+++|||+..||++|||||||+||+.++.+.+++...+|+|||+|||++||||||||+..++.. ....
T Consensus 192 ~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~ 271 (290)
T 3bo5_A 192 VMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLR 271 (290)
T ss_dssp -EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCC
T ss_pred cceeEEeeeecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCC
Confidence 479999999999999999999999998888776568999999999999999999999776532 1235
Q ss_pred eeeecCCcCcccccC
Q 036712 1006 VPCLCKAPNCRMFMN 1020 (1020)
Q Consensus 1006 ~~C~CGs~~CRg~ln 1020 (1020)
++|+||+++|||+|+
T Consensus 272 ~~C~CGs~~CrG~l~ 286 (290)
T 3bo5_A 272 KPCYCGAKSCTAFLP 286 (290)
T ss_dssp CBCCCCCTTCCSBCC
T ss_pred ccccCCCcCCCccCC
Confidence 899999999999985
No 6
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.4e-32 Score=304.10 Aligned_cols=154 Identities=30% Similarity=0.569 Sum_probs=132.3
Q ss_pred HHHHHHhhccCcccEEEEecC-CCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeC---CeEE
Q 036712 866 KERLYHLQRTEKHRVCFGKSG-IHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKIS---EEVV 941 (1020)
Q Consensus 866 ~~r~~~~q~~~~~~l~v~~s~-~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~---~~~v 941 (1020)
.++|+.+|++...+|.|.++. ++||||||.++|++|+||+||+||||+..+++.|...|...+ ..|+|.++ ..++
T Consensus 128 ~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~-~~Y~f~l~~~~~~~~ 206 (300)
T 2r3a_A 128 DCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKG-ITYLFDLDYESDEFT 206 (300)
T ss_dssp TCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHH-HHTEEECCSSCSSEE
T ss_pred cCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhcc-ccEEEEeecCCceEE
Confidence 466777899999999998875 799999999999999999999999999999998887665443 46999886 5789
Q ss_pred EecccCCCcccccCCCCCCCeeEEEEEECC---CeeEEEEEEccCCCCCCeEEEecCCCCCCC------------CCCCe
Q 036712 942 IDATNKGNIARLINHSCMPNCYARIMSVGD---CESRIVLIAKTNVSAGDELTYDYLFDPDEH------------DELKV 1006 (1020)
Q Consensus 942 IDa~~~GNiaRfINHSC~PN~~~~~v~v~~---~~~ri~l~A~RdI~~GEELT~DY~~~~~~~------------~~~~~ 1006 (1020)
|||+..||++|||||||+|||.+..+.+++ ...+|+|||+|||++||||||||++..... ....+
T Consensus 207 IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~~~~~ 286 (300)
T 2r3a_A 207 VDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKKRVRT 286 (300)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC--------------CCCC
T ss_pred EecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCccccccccccccccccccCCC
Confidence 999999999999999999999998877653 357999999999999999999999863221 11358
Q ss_pred eeecCCcCcccccC
Q 036712 1007 PCLCKAPNCRMFMN 1020 (1020)
Q Consensus 1007 ~C~CGs~~CRg~ln 1020 (1020)
+|+||+++|||+||
T Consensus 287 ~C~CGs~~Crg~ln 300 (300)
T 2r3a_A 287 VCKCGAVTCRGYLN 300 (300)
T ss_dssp BCCCCCTTCCSBCC
T ss_pred EeeCCCccccccCc
Confidence 99999999999999
No 7
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=99.97 E-value=3.6e-32 Score=300.90 Aligned_cols=153 Identities=29% Similarity=0.492 Sum_probs=119.3
Q ss_pred HHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCC-----eE
Q 036712 866 KERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISE-----EV 940 (1020)
Q Consensus 866 ~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~-----~~ 940 (1020)
.++|+.+|++...+|.|++++++||||||+++|++|++|+||+|+||+..+++.|...|...+ ..|+|.++. .+
T Consensus 125 ~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~-~~Y~f~l~~~~~~~~~ 203 (299)
T 1mvh_A 125 ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDG-ITYLFDLDMFDDASEY 203 (299)
T ss_dssp TCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCS-CCCEEEECSSCSSSCE
T ss_pred CcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccC-ceEEEEecCCCCCccE
Confidence 467778999999999999999999999999999999999999999999999998887775543 579999974 68
Q ss_pred EEecccCCCcccccCCCCCCCeeEEEEEECC---CeeEEEEEEccCCCCCCeEEEecCCCCCC--CC----------CCC
Q 036712 941 VIDATNKGNIARLINHSCMPNCYARIMSVGD---CESRIVLIAKTNVSAGDELTYDYLFDPDE--HD----------ELK 1005 (1020)
Q Consensus 941 vIDa~~~GNiaRfINHSC~PN~~~~~v~v~~---~~~ri~l~A~RdI~~GEELT~DY~~~~~~--~~----------~~~ 1005 (1020)
+|||+..||++|||||||+||+.+..+.++. ...+|+|||+|||++||||||||++..+. .+ ...
T Consensus 204 ~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~k~~ 283 (299)
T 1mvh_A 204 TVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLR 283 (299)
T ss_dssp EEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCCC-------------
T ss_pred EEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCcccccccccccccccccccCC
Confidence 9999999999999999999999987666542 34799999999999999999999987651 11 122
Q ss_pred eeeecCCcCccccc
Q 036712 1006 VPCLCKAPNCRMFM 1019 (1020)
Q Consensus 1006 ~~C~CGs~~CRg~l 1019 (1020)
++|+||+++|||+|
T Consensus 284 ~~C~CGs~~Crg~l 297 (299)
T 1mvh_A 284 RQCKCGSANCRGWL 297 (299)
T ss_dssp --------------
T ss_pred cCcCCCCCCCcccc
Confidence 69999999999997
No 8
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=99.97 E-value=2.7e-32 Score=302.66 Aligned_cols=155 Identities=26% Similarity=0.427 Sum_probs=115.2
Q ss_pred hHHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhc-CCceEEEEeCC-----
Q 036712 865 FKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKE-GKDCYLFKISE----- 938 (1020)
Q Consensus 865 ~~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~-~~~~Y~f~i~~----- 938 (1020)
..++|+.+|++...+|.|.+++.+||||||+++|++|++|+||+||||+..+++.|...|... ..+.|+|.++.
T Consensus 120 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~ 199 (302)
T 1ml9_A 120 KDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPD 199 (302)
T ss_dssp TTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSS
T ss_pred CCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCceEEEEeccccCcc
Confidence 346777899999999999999999999999999999999999999999999999988766332 34679999863
Q ss_pred ---------eEEEecccCCCcccccCCCCCCCeeEEEEEEC---CCeeEEEEEEccCCCCCCeEEEecCCCCCCCC----
Q 036712 939 ---------EVVIDATNKGNIARLINHSCMPNCYARIMSVG---DCESRIVLIAKTNVSAGDELTYDYLFDPDEHD---- 1002 (1020)
Q Consensus 939 ---------~~vIDa~~~GNiaRfINHSC~PN~~~~~v~v~---~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~---- 1002 (1020)
.++|||+.+||++|||||||+|||.+..+..+ ...++|+|||+|||++||||||||++.++...
T Consensus 200 ~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~ 279 (302)
T 1ml9_A 200 SLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAH 279 (302)
T ss_dssp SSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC----------
T ss_pred cccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccc
Confidence 68999999999999999999999987654332 12369999999999999999999988765432
Q ss_pred -----CCCeeeecCCcCccccc
Q 036712 1003 -----ELKVPCLCKAPNCRMFM 1019 (1020)
Q Consensus 1003 -----~~~~~C~CGs~~CRg~l 1019 (1020)
...++|+||+++|||+|
T Consensus 280 ~~~k~~~~~~C~CGs~~Crg~l 301 (302)
T 1ml9_A 280 DPSKISEMTKCLCGTAKCRGYL 301 (302)
T ss_dssp ----------------------
T ss_pred cccccCCCcEeeCCCCcCcccc
Confidence 12479999999999997
No 9
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=99.97 E-value=6.2e-32 Score=297.25 Aligned_cols=146 Identities=31% Similarity=0.510 Sum_probs=126.5
Q ss_pred HHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCCe----EE
Q 036712 866 KERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEE----VV 941 (1020)
Q Consensus 866 ~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~~----~v 941 (1020)
.++++.+|++...+|+|++++++||||||+++|++|++|+||+|+|++..+++.| ....|+|.++.. ++
T Consensus 135 ~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r-------~~~~Y~f~l~~~~~~~~~ 207 (287)
T 3hna_A 135 NCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVR-------EEDSYLFDLDNKDGEVYC 207 (287)
T ss_dssp TCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTC-------SCCTTEEESCCSSSSCEE
T ss_pred CCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhh-------cccceEEEeccCCCceEE
Confidence 4667779999999999999999999999999999999999999999998877654 245799998643 79
Q ss_pred EecccCCCcccccCCCCCCCeeEEEEEECCC---eeEEEEEEccCCCCCCeEEEecCCCCCCCCCCCeeeecCCcCcccc
Q 036712 942 IDATNKGNIARLINHSCMPNCYARIMSVGDC---ESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMF 1018 (1020)
Q Consensus 942 IDa~~~GNiaRfINHSC~PN~~~~~v~v~~~---~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~~~~C~CGs~~CRg~ 1018 (1020)
|||+.+||++|||||||+||+.+..+.+.+. .++|+|||+|||++||||||||+..++......|.|+||+++|||+
T Consensus 208 IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CGs~~CRgs 287 (287)
T 3hna_A 208 IDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCRHS 287 (287)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCCCTTCSCC
T ss_pred EeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCCCCCCCCC
Confidence 9999999999999999999999877665432 3699999999999999999999976543333468999999999985
No 10
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.96 E-value=6.1e-29 Score=252.47 Aligned_cols=135 Identities=27% Similarity=0.497 Sum_probs=119.3
Q ss_pred hhHHHHHHhhccCcccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcC-CceEEEE---eCCe
Q 036712 864 SFKERLYHLQRTEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEG-KDCYLFK---ISEE 939 (1020)
Q Consensus 864 ~~~~r~~~~q~~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~-~~~Y~f~---i~~~ 939 (1020)
.++...+.+|++...+|.|..++++||||||+++|++||+|+||.|++++..+++.|+..|.... ...|+|. ++..
T Consensus 16 ~~~~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~~~~ 95 (166)
T 3f9x_A 16 ERKRIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKT 95 (166)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEETTEE
T ss_pred HHHHHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecCCCC
Confidence 44555567899999999999999999999999999999999999999999999999998886543 3445443 6788
Q ss_pred EEEecccC-CCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 036712 940 VVIDATNK-GNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPD 999 (1020)
Q Consensus 940 ~vIDa~~~-GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~ 999 (1020)
++|||+.. ||++|||||||.|||.++.+.+++ ..+|+|+|+|||++||||||||++++.
T Consensus 96 ~~iDa~~~~Gn~aRfiNHSC~PN~~~~~~~~~~-~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 96 YCVDATRETNRLGRLINHSKCGNCQTKLHDIDG-VPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp EEEECCSCCSCSGGGCEECTTCSEEEEEEEETT-EEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred eEEechhcCCChhheeecCCCCCeeEEEEEECC-eeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 99999996 999999999999999999888875 789999999999999999999998753
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.91 E-value=2e-24 Score=234.54 Aligned_cols=117 Identities=26% Similarity=0.367 Sum_probs=101.5
Q ss_pred ccEEEEecCCC--ccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCCeEEEecc--------cC
Q 036712 878 HRVCFGKSGIH--GWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVIDAT--------NK 947 (1020)
Q Consensus 878 ~~l~v~~s~~k--G~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~~~vIDa~--------~~ 947 (1020)
..|.|++|+++ ||||||+++|++|++|+||.|++|+..+++.|...+. .|+|.++..++|||+ ..
T Consensus 109 ~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~-----~~~f~l~~~~~IDa~~~~~~~~~~~ 183 (261)
T 2f69_A 109 ERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN-----GNTLSLDEETVIDVPEPYNHVSKYC 183 (261)
T ss_dssp TTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGC-----SSCEECSSSCEEECCTTTTSTTTCC
T ss_pred ceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhc-----cceeeecCCeEEEcccccccccccc
Confidence 57899999988 9999999999999999999999999999887765542 467899999999995 49
Q ss_pred CCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 036712 948 GNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPD 999 (1020)
Q Consensus 948 GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~ 999 (1020)
||++|||||||+|||.++.+...+....|+|||+|||++||||||||+++..
T Consensus 184 Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 184 ASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp SCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred ccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence 9999999999999999988633221344599999999999999999998865
No 12
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.90 E-value=9.9e-25 Score=210.13 Aligned_cols=110 Identities=25% Similarity=0.298 Sum_probs=96.7
Q ss_pred cccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCCeEEEecccCCCcccccCC
Q 036712 877 KHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVIDATNKGNIARLINH 956 (1020)
Q Consensus 877 ~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~~~vIDa~~~GNiaRfINH 956 (1020)
.++|.|++|+++||||||+++|++|++|+||.|++++..+++. ....|+|.++. |++..+|++|||||
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~--------~~~~y~f~~~~----d~~~~~~~~~~~NH 70 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGT--------ALEDYLFSRKN----MSAMALGFGAIFNH 70 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHH--------HSCSEEEEETT----EEEEESSSHHHHHS
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhh--------ccCCeEEEeCC----ccccccCceeeecc
Confidence 4789999999999999999999999999999999998876643 23469999988 88999999999999
Q ss_pred CCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCC
Q 036712 957 SCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEH 1001 (1020)
Q Consensus 957 SC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~ 1001 (1020)
||+|||.+.. + .+..++.|+|+|||++|||||+||+..++..
T Consensus 71 sc~pN~~~~~--~-~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 71 SKDPNARHEL--T-AGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp CSSCCCEEEE--C-SSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred CCCCCeeEEE--E-CCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 9999998875 2 2356899999999999999999999987654
No 13
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.90 E-value=2.3e-24 Score=215.54 Aligned_cols=121 Identities=23% Similarity=0.351 Sum_probs=100.7
Q ss_pred hhHHHHHHhhccCcccEEEEecCCC--ccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeC---C
Q 036712 864 SFKERLYHLQRTEKHRVCFGKSGIH--GWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKIS---E 938 (1020)
Q Consensus 864 ~~~~r~~~~q~~~~~~l~v~~s~~k--G~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~---~ 938 (1020)
+++.+..++.++....|.|++|.++ ||||||+++|++|++|+||.|++++..++. ...|+|.+. .
T Consensus 15 ~~~~~~~~~~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~----------~~~Y~f~i~~~~~ 84 (149)
T 2qpw_A 15 TLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK----------NNVYMWEVYYPNL 84 (149)
T ss_dssp CGGGSCHHHHHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC----------CSSSEEEEEETTT
T ss_pred ccchhhHHHHhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc----------cCceEEEEecCCC
Confidence 3444444556778899999999865 999999999999999999999999765431 356999983 3
Q ss_pred -eEEEeccc--CCCcccccCCCCCC---CeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 036712 939 -EVVIDATN--KGNIARLINHSCMP---NCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPD 999 (1020)
Q Consensus 939 -~~vIDa~~--~GNiaRfINHSC~P---N~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~ 999 (1020)
.++|||+. .||++|||||||+| ||.+.. .+ .+|.|+|+|||++||||||||+..+.
T Consensus 85 ~~~~IDa~~~~~gn~~RfINhSc~p~eqNl~~~~--~~---~~I~~~A~RdI~~GEEL~~dY~~~~~ 146 (149)
T 2qpw_A 85 GWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLE--IN---RAIYYKTLKPIAPGEELLVWYNGEDN 146 (149)
T ss_dssp EEEEEECSSGGGSCGGGGCEECBTTBTCCEEEEE--ET---TEEEEEESSCBCTTCBCEECCCCCCC
T ss_pred eeEEEeCCCCCCCcceeeeeccCChhhcCEEEEE--EC---CEEEEEEccCCCCCCEEEEccCCccC
Confidence 36899998 99999999999999 998742 33 49999999999999999999998754
No 14
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.89 E-value=1.1e-23 Score=232.57 Aligned_cols=118 Identities=25% Similarity=0.347 Sum_probs=102.1
Q ss_pred cccEEEEecCCCc--cEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCCeEEEec--------cc
Q 036712 877 KHRVCFGKSGIHG--WGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVIDA--------TN 946 (1020)
Q Consensus 877 ~~~l~v~~s~~kG--~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~~~vIDa--------~~ 946 (1020)
.++|.|++|+++| |||||+++|++|++|+||+|++|+..+++.|...+. .|+|.++...+||| +.
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~-----~~~~~l~~~~~iDa~~~~~~~~~~ 236 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN-----GNTLSLDEETVIDVPEPYNHVSKY 236 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGC-----TTEEECSSSCEEECCTTTTSTTTC
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcc-----cCEEecCCCEEEeCccccccccee
Confidence 3678999999988 999999999999999999999999999988755442 36799999999999 77
Q ss_pred CCCcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 036712 947 KGNIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPD 999 (1020)
Q Consensus 947 ~GNiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~ 999 (1020)
.||+||||||||+|||.++.+........++|+|+|||++||||||||+++..
T Consensus 237 ~gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~ 289 (293)
T 1h3i_A 237 CASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 289 (293)
T ss_dssp CSCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred eccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence 99999999999999999988643221233589999999999999999999864
No 15
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.88 E-value=1.7e-23 Score=226.81 Aligned_cols=136 Identities=17% Similarity=0.121 Sum_probs=102.8
Q ss_pred cCcccEEEEecCC-----CccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCCeEEEecccCCC
Q 036712 875 TEKHRVCFGKSGI-----HGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVIDATNKGN 949 (1020)
Q Consensus 875 ~~~~~l~v~~s~~-----kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~~~vIDa~~~GN 949 (1020)
....+++|..+.. +||||||+++|++||+|+||+|+|+...+.+.+. +...+...|.+..+. ...+++..||
T Consensus 128 ~~~~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~--~~~~~~~dF~i~~s~-~~~~a~~~g~ 204 (273)
T 3s8p_A 128 ATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENM--LLRHGENDFSVMYST-RKNCAQLWLG 204 (273)
T ss_dssp SGGGCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHH--HCCTTTSCTTEEEET-TTTEEEEEES
T ss_pred CCCCCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHH--Hhhhcccccceeccc-cccccceecc
Confidence 3445677776654 9999999999999999999999998776665432 322222222222211 1235788999
Q ss_pred cccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCCCeeeecCCcCccccc
Q 036712 950 IARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMFM 1019 (1020)
Q Consensus 950 iaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~~~~C~CGs~~CRg~l 1019 (1020)
++|||||||+|||.+.. .+ ..+|+|+|+|||++|||||+||+...+.. ..+.|.||+.+|||..
T Consensus 205 ~arfiNHSC~PN~~~~~--~~--~~~i~i~A~RdI~~GEELt~~Y~~~~~~~--~~f~C~C~~c~crG~g 268 (273)
T 3s8p_A 205 PAAFINHDCRPNCKFVS--TG--RDTACVKALRDIEPGEEISCYYGDGFFGE--NNEFCECYTCERRGTG 268 (273)
T ss_dssp GGGGCEECSSCSEEEEE--EE--TTEEEEEESSCBCTTCBCEECCCTTTTSG--GGTTCCCHHHHHHTCG
T ss_pred hHHhhCCCCCCCeEEEE--cC--CCEEEEEECceeCCCCEEEEecCchhcCC--CCeEEECCCCcCCCCC
Confidence 99999999999997642 32 35899999999999999999999887643 3688999999999975
No 16
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=99.87 E-value=4.8e-23 Score=190.46 Aligned_cols=85 Identities=33% Similarity=0.597 Sum_probs=73.4
Q ss_pred CCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhccccc
Q 036712 218 KPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKC 297 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~ 297 (1020)
+|.+|.+|||||||| ++||||||+|+++. +..++ ..++.++|+||| +++||||.+.+|+||.+++++|
T Consensus 2 ~p~~f~~GdlVwaK~-~g~p~WPa~V~~~~----~~~~k-~~~~~~~V~FFG------t~~~awv~~~~l~pf~~~~~~~ 69 (94)
T 3qby_A 2 MPHAFKPGDLVFAKM-KGYPHWPARIDDIA----DGAVK-PPPNKYPIFFFG------THETAFLGPKDLFPYDKCKDKY 69 (94)
T ss_dssp CCCCCCTTCEEEECC-TTSCCEEEEECCCC----TTSBC-CCTTCEEEEETT------TCCEEEECGGGEEEHHHHHHHH
T ss_pred CCCcCccCCEEEEec-CCCCCCCEEEeecc----ccccc-CCCCEEEEEEEc------CCCcceEchhHeeEHHHHHHHH
Confidence 589999999999999 59999999999974 33333 357899999999 8889999999999999999999
Q ss_pred CccccccCChHHHHHHHHHHH
Q 036712 298 EPTQLHKSKISGFQIALEEAV 318 (1020)
Q Consensus 298 ~q~~~~~~k~~~f~~Aleea~ 318 (1020)
++ .+|.+.|++||+||.
T Consensus 70 ~k----~~k~k~F~~Al~Eie 86 (94)
T 3qby_A 70 GK----PNKRKGFNEGLWEIQ 86 (94)
T ss_dssp CS----CCSSTTHHHHHHHHH
T ss_pred cc----CccHHHHHHHHHHHh
Confidence 43 346788999999994
No 17
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=99.86 E-value=3.6e-22 Score=189.97 Aligned_cols=89 Identities=34% Similarity=0.567 Sum_probs=77.2
Q ss_pred CCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccC-CCeEEEEEecccCCCCCcceeeeecCccccchhcccccCc
Q 036712 221 DFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCI-PGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKCEP 299 (1020)
Q Consensus 221 ~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~-~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~~q 299 (1020)
.|.+|||||||| ++||||||+|+||. .+|+++++.++ .+.++|+||| +++|+||.+.+|+||.+++++|.+
T Consensus 8 ~~~~GdlVwaK~-~g~p~WPa~V~~~~-~~p~~~~~~~~~~~~~~V~FFg------~~~~awv~~~~l~p~~~~~~~~~~ 79 (110)
T 2daq_A 8 KLHYKQIVWVKL-GNYRWWPAEICNPR-SVPLNIQGLKHDLGDFPVFFFG------SHDYYWVHQGRVFPYVEGDKSFAE 79 (110)
T ss_dssp SCCSSEEEEEEC-SSSCEEEEEECCTT-TSCHHHHTSCCCSSCEEEEETT------TTEEEEECSSSSEECCSSCCSSSC
T ss_pred CCCCCCEEEEEe-CCCCCCceeeCChh-hCCHHHhhccCCCCcEEEEEec------CCCEEEEcHHHCcCcchhhHHHhh
Confidence 578999999999 58999999999997 89999877665 6899999999 899999999999999999887632
Q ss_pred cccccCChHHHHHHHHHHHH
Q 036712 300 TQLHKSKISGFQIALEEAVL 319 (1020)
Q Consensus 300 ~~~~~~k~~~f~~Aleea~~ 319 (1020)
. ++.+.+.|++||+||..
T Consensus 80 ~--~~~~~k~f~~Al~eA~~ 97 (110)
T 2daq_A 80 G--QTSINKTFKKALEEAAK 97 (110)
T ss_dssp S--SCCCCSHHHHHHHHHHH
T ss_pred h--cccchHHHHHHHHHHHH
Confidence 2 34567899999999944
No 18
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=99.84 E-value=5.3e-22 Score=199.40 Aligned_cols=92 Identities=30% Similarity=0.512 Sum_probs=74.8
Q ss_pred hcccccC---CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccc
Q 036712 212 KRKDVYK---PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLF 288 (1020)
Q Consensus 212 ~~~~~~~---~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~ 288 (1020)
.|+.+|. +.+|.+|||||||| ++||||||+|++|. +. ......+.++|+||| +++||||.+.+|+
T Consensus 10 ~~~~~~~~~~~~~f~~GdlVwaK~-~g~p~WPa~V~~~~----~~-~~~~~~~~~~V~FfG------~~~~awv~~~~l~ 77 (153)
T 4fu6_A 10 GRENLYFQGMTRDFKPGDLIFAKM-KGYPHWPARVDEVP----DG-AVKPPTNKLPIFFFG------THETAFLGPKDIF 77 (153)
T ss_dssp ---CTTTTCSGGGCCTTCEEEECC-TTSCCEEEEECCCC--------CCCCTTCEEEEETT------TCCEEEECGGGEE
T ss_pred chhhHHHhhcccCCCCCCEEEEeC-CCCCCCCEEEeEch----hh-ccCCCCCEEEEEecC------CCCeEEeCHHHcc
Confidence 3467777 78999999999999 59999999999984 32 234457899999999 8899999999999
Q ss_pred cchhcccccCccccccCChHHHHHHHHHHHH
Q 036712 289 PFAEFMDKCEPTQLHKSKISGFQIALEEAVL 319 (1020)
Q Consensus 289 py~e~~~~~~q~~~~~~k~~~f~~Aleea~~ 319 (1020)
||.+++++|.+ ++|.+.|++||+||..
T Consensus 78 ~f~e~~~~~~k----~~k~k~f~~Av~Eie~ 104 (153)
T 4fu6_A 78 PYSENKEKYGK----PNKRKGFNEGLWEIDN 104 (153)
T ss_dssp EHHHHHHHHCS----CCSSTTHHHHHHHHHH
T ss_pred ChHhHHHHHhc----ccchHHHHHHHHHHHH
Confidence 99999999843 3466789999999854
No 19
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=99.82 E-value=3.6e-21 Score=192.05 Aligned_cols=89 Identities=24% Similarity=0.453 Sum_probs=74.3
Q ss_pred CCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhccccc
Q 036712 218 KPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKC 297 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~ 297 (1020)
....|.+|||||||| ++||||||+|++|. ....+...++.++|+||| +++||||.+.+|+||.+++++|
T Consensus 13 dg~~f~~GDLVWaKv-kG~PwWPa~V~~~~----~~~k~~~~~~~~~V~FFG------~~~~awv~~~~L~pf~e~~e~f 81 (154)
T 3llr_A 13 DGRGFGIGELVWGKL-RGFSWWPGRIVSWW----MTGRSRAAEGTRWVMWFG------DGKFSVVCVEKLMPLSSFCSAF 81 (154)
T ss_dssp SSCCCCTTCEEEECC-TTSCCEEEEEECGG----GTTSCCCCTTEEEEEETT------TCCEEEEEGGGEEEGGGHHHHC
T ss_pred cCCCCccCCEEEEec-CCCCCCCEEEeccc----ccccccCCCCEEEEEEeC------CCCEEEEcHHHCcchhhhHHHH
Confidence 345799999999999 69999999999985 223334458999999999 7789999999999999999999
Q ss_pred CccccccCChHHHHHHHHHHHH
Q 036712 298 EPTQLHKSKISGFQIALEEAVL 319 (1020)
Q Consensus 298 ~q~~~~~~k~~~f~~Aleea~~ 319 (1020)
.+... +|...|++||+||+.
T Consensus 82 ~~~~~--~K~~~fr~AV~eAle 101 (154)
T 3llr_A 82 HQATY--NKQPMYRKAIYEVLQ 101 (154)
T ss_dssp CHHHH--HHCHHHHHHHHHHHH
T ss_pred hhhhc--cchHHHHHHHHHHHH
Confidence 55422 256889999999965
No 20
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=99.82 E-value=4.1e-21 Score=182.41 Aligned_cols=87 Identities=32% Similarity=0.596 Sum_probs=73.3
Q ss_pred ccCCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhccc
Q 036712 216 VYKPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMD 295 (1020)
Q Consensus 216 ~~~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~ 295 (1020)
......|.+|||||||+ ++||||||+|+++ |+..++ ...+.++|+||| +++||||.+.+|+||.++++
T Consensus 14 ~~~~~~~~~GdlVwaK~-kGyP~WPa~V~~~----p~~~~k-~~~~~~~V~FFG------t~~~awv~~~~l~pf~~~~~ 81 (110)
T 1ri0_A 14 SNRQKEYKCGDLVFAKM-KGYPHWPARIDEM----PEAAVK-STANKYQVFFFG------THETAFLGPKDLFPYEESKE 81 (110)
T ss_dssp CCCSSSCCTTCEEEEEE-TTEEEEEEEEECC----CSSSSC-CCSSCEEEEETT------TTEEEEECSTTEECHHHHHH
T ss_pred ccccCCCCCCCEEEEEe-CCCCCCCEEEecc----cHhhcC-CCCCEEEEEEec------CCCEEEECHHHccchhhhHH
Confidence 45567899999999999 6999999999986 444433 357899999999 88999999999999999999
Q ss_pred ccCccccccCChHHHHHHHHHHH
Q 036712 296 KCEPTQLHKSKISGFQIALEEAV 318 (1020)
Q Consensus 296 ~~~q~~~~~~k~~~f~~Aleea~ 318 (1020)
+|.+. +|.+.|++||+||-
T Consensus 82 k~~~~----~K~k~f~~Al~Eie 100 (110)
T 1ri0_A 82 KFGKP----NKRKGFSEGLWEIE 100 (110)
T ss_dssp HCCCC----CCCHHHHHHHHHHH
T ss_pred HHccc----cccHHHHHHHHHHH
Confidence 88432 36789999999994
No 21
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=99.82 E-value=1.7e-21 Score=184.61 Aligned_cols=89 Identities=22% Similarity=0.430 Sum_probs=75.5
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccC-CCeEEEEEecccCCCCCcceeeeecCccccchhc-cccc
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCI-PGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF-MDKC 297 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~-~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~-~~~~ 297 (1020)
.+|.+||||||||+ +||||||+|++|. .+|+++++... .+.|+|+||| +++||||.+.+|+||.+. .+.|
T Consensus 4 ~~~~~GdlVwaK~~-gyP~WPa~V~~~~-~~p~~v~~~~~~~~~~~V~FFg------~~~~aWv~~~~l~p~~~~~~~~~ 75 (108)
T 2l89_A 4 DRLNFGDRILVKAP-GYPWWPALLLRRK-ETKDSLNTNSSFNVLYKVLFFP------DFNFAWVKRNSVKPLLDSEIAKF 75 (108)
T ss_dssp CCCCTTEEEEEECS-SSCEEEEEEEEEE-EEESSSCSSSCEEEEEEEEETT------TTEEEEECGGGEEECCHHHHHHH
T ss_pred CcccCCCEEEEEeC-CcCCCceEecCcc-cCcHHHhhccCCCCeEEEEECC------CCCEEEEchhhceeCCHHHHHHH
Confidence 57999999999994 9999999999997 88999987654 7899999999 789999999999999976 3455
Q ss_pred -CccccccCChHHHHHHHHHHHH
Q 036712 298 -EPTQLHKSKISGFQIALEEAVL 319 (1020)
Q Consensus 298 -~q~~~~~~k~~~f~~Aleea~~ 319 (1020)
++. +.|.+.|++|+++|..
T Consensus 76 ~~~~---k~k~k~l~~Aye~A~~ 95 (108)
T 2l89_A 76 LGSS---KRKSKELIEAYEASKT 95 (108)
T ss_dssp HHCS---SSCCHHHHHHHHHHTC
T ss_pred Hhcc---CCCCHHHHHHHHHHcc
Confidence 332 3456899999999954
No 22
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=99.81 E-value=1.2e-20 Score=187.72 Aligned_cols=88 Identities=24% Similarity=0.534 Sum_probs=72.7
Q ss_pred CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhcccccC
Q 036712 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKCE 298 (1020)
Q Consensus 219 ~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~~ 298 (1020)
...|.+|||||||| ++||||||+|++|. ....+....+.|+|+||| +++|+||.+.+|+||.+++++|.
T Consensus 9 ~~~~~~GDlVWaKv-kGyPwWPa~V~~~~----~~~~~~~~~~~~~V~FFG------~~~~awv~~~~L~p~~~~~e~f~ 77 (147)
T 1khc_A 9 DKEFGIGDLVWGKI-KGFSWWPAMVVSWK----ATSKRQAMPGMRWVQWFG------DGKFSEISADKLVALGLFSQHFN 77 (147)
T ss_dssp SSSCCTTCEEEEEE-TTTEEEEEEEECGG----GTTSCCCCTTEEEEEETT------TCCEEEEEGGGCEETTSHHHHCC
T ss_pred CccCcCCCEEEEec-CCcCCCCEEeccch----hhhcccCCCCeEEEEEec------CCCEEEEcHHHCccchHHHHHHh
Confidence 35799999999999 69999999999985 333344457899999999 78899999999999999999995
Q ss_pred ccccccCChHHHHHHHHHHHH
Q 036712 299 PTQLHKSKISGFQIALEEAVL 319 (1020)
Q Consensus 299 q~~~~~~k~~~f~~Aleea~~ 319 (1020)
+...+ |.+.|++||+||.+
T Consensus 78 ~~~~~--K~~~f~kAv~eA~e 96 (147)
T 1khc_A 78 LATFN--KLVSYRKAMYHTLE 96 (147)
T ss_dssp HHHHH--HCHHHHHHHHHHHH
T ss_pred hhccc--cHHHHHHHHHHHHH
Confidence 42122 34789999999966
No 23
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=99.80 E-value=3e-20 Score=182.73 Aligned_cols=94 Identities=30% Similarity=0.417 Sum_probs=75.1
Q ss_pred CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccC-CCeEEEEEecccCCCCCcceeeeecCccccchhccccc
Q 036712 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCI-PGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKC 297 (1020)
Q Consensus 219 ~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~-~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~ 297 (1020)
...|.+|||||||| ++||||||+|++|. ..+.. ++.+. .+.|+|+|||+ .++||||.+.+|+||.++..++
T Consensus 20 ~~~~~~GdlVwaK~-~g~P~WPa~V~~~~-~~~~~-~~~~~~~~~~~V~FFg~-----~~~~aWv~~~~l~pf~~~~~~~ 91 (134)
T 2gfu_A 20 SSDFSPGDLVWAKM-EGYPWWPSLVYNHP-FDGTF-IREKGKSVRVHVQFFDD-----SPTRGWVSKRLLKPYTGSKSKE 91 (134)
T ss_dssp SCCCCTTSEEEECC-TTSCCEEEECCCCS-STTCC-EEESSSCEEEEEEECSS-----SCEEEEECGGGEEESCCTTSTT
T ss_pred CCCCCCCCEEEEee-cCCCCCCeeecchh-hhhhh-hhccCCCceEEEEECCC-----CCceEEECHHHcccCcchhHHH
Confidence 47899999999999 59999999999985 44432 33333 67999999992 2589999999999999998876
Q ss_pred C-ccccccCChHHHHHHHHHHHHh
Q 036712 298 E-PTQLHKSKISGFQIALEEAVLA 320 (1020)
Q Consensus 298 ~-q~~~~~~k~~~f~~Aleea~~a 320 (1020)
. +...++.+...|++||+||..|
T Consensus 92 ~~k~~~~~~~~~~~~~Ai~~A~~a 115 (134)
T 2gfu_A 92 AQKGGHFYSAKPEILRAMQRADEA 115 (134)
T ss_dssp TSTTCTTCCCCHHHHHHHHHHHHH
T ss_pred HhhcccchhccHHHHHHHHHHHHH
Confidence 3 2324455778999999999876
No 24
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.80 E-value=1.1e-20 Score=202.78 Aligned_cols=130 Identities=20% Similarity=0.204 Sum_probs=95.4
Q ss_pred cCcccEEEEec-----CCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCCeEEEecccCCC
Q 036712 875 TEKHRVCFGKS-----GIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISEEVVIDATNKGN 949 (1020)
Q Consensus 875 ~~~~~l~v~~s-----~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~~~vIDa~~~GN 949 (1020)
.....++|..+ .++|+||||+++|++|++|.||.|+++...+.+.+ .+.. ....|.+..+ ...+++..+||
T Consensus 100 ~~~~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~--~~~~-~~n~f~i~~~-~~~~~~~l~~~ 175 (247)
T 3rq4_A 100 LPESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEG--LLRA-GENDFSIMYS-TRKRSAQLWLG 175 (247)
T ss_dssp SGGGCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGG--GCCT-TTSCTTEEEE-TTTTEEEEEES
T ss_pred CCCCCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHH--hhhc-cCCcEEEEec-CCcccceeecc
Confidence 44567777764 46999999999999999999999999876555442 1111 1111222221 11246788899
Q ss_pred cccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCCCeeeecCCcCcc
Q 036712 950 IARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCR 1016 (1020)
Q Consensus 950 iaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~~~~C~CGs~~CR 1016 (1020)
++|||||||.|||.+.. +++ .+|.|+|+|||++|||||++|+..++.. ..+.|.|+ .|.
T Consensus 176 ~ar~iNHSC~PN~~~~~--~~~--~~i~v~A~rdI~~GEElt~~Y~~~~~~~--~~f~C~C~--~C~ 234 (247)
T 3rq4_A 176 PAAFINHDCKPNCKFVP--ADG--NAACVKVLRDIEPGDEVTCFYGEGFFGE--KNEHCECH--TCE 234 (247)
T ss_dssp GGGGCEECSSCSEEEEE--ETT--TEEEEEESSCBCTTCBCEECCCTTSSSG--GGTTCCCH--HHH
T ss_pred hhhhcCCCCCCCEEEEE--eCC--CEEEEEECCcCCCCCEEEEecCchhcCC--CCCEEECC--CCC
Confidence 99999999999996544 333 5899999999999999999999887643 45789997 553
No 25
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=99.77 E-value=1.4e-19 Score=179.86 Aligned_cols=93 Identities=27% Similarity=0.574 Sum_probs=74.5
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCC-------------chhhhccc-------CCCeEEEEEecccCCCCCcce
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQA-------------PEAVLRCC-------IPGCLCVMFFGYSKNGTQRDY 279 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~-------------p~~~~~~~-------~~~~~~V~FfG~~~~~~~~dy 279 (1020)
..|.+|||||||| ++||||||+||||.... |.+|++.. ..+.|||+||| +.++|
T Consensus 35 ~~~~pgdlVWAK~-~GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd-----~~~t~ 108 (158)
T 3pfs_A 35 GDLEPLELVWAKC-RGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFD-----NKRTW 108 (158)
T ss_dssp SCCCTTCEEEEEC-TTSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECS-----TTCCE
T ss_pred CCCCCCCEEEEec-CCCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcC-----CCCce
Confidence 3599999999999 69999999999998433 88888862 37899999999 34799
Q ss_pred eeeecCccccchhcccccCccccccCChHHHHHHHHHHHH
Q 036712 280 GWVKQGMLFPFAEFMDKCEPTQLHKSKISGFQIALEEAVL 319 (1020)
Q Consensus 280 ~W~~~~~i~py~e~~~~~~q~~~~~~k~~~f~~Aleea~~ 319 (1020)
+||.+++|+||.... .+.+..+..+|...+++||++|+.
T Consensus 109 aWV~~~~L~Pl~~d~-~~D~~kl~e~Kks~~rKAl~~AYe 147 (158)
T 3pfs_A 109 QWLPRDKVLPLGVED-TVDKLKMLEGRKTSIRKSVQVAYD 147 (158)
T ss_dssp EEEEGGGEEECSSCH-HHHHHHHTTTTTSTHHHHHHHHHH
T ss_pred EeeccccEeecCCch-hhhhhhhccCCCHHHHHHHHHHHH
Confidence 999999999998542 124444455667779999999965
No 26
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=99.77 E-value=1.9e-19 Score=170.89 Aligned_cols=91 Identities=20% Similarity=0.354 Sum_probs=72.4
Q ss_pred CCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccC---CCeEEEEEecccCCCCCcceeeeecCccccchhc-
Q 036712 218 KPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCI---PGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF- 293 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~---~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~- 293 (1020)
.+.+|.+|||||||| ++||||||+|++|. +.++.+++.++ .+.++|+||| +++||||.+.+|+||.++
T Consensus 3 ~~~~~~~GdlVwaK~-~gyP~WPa~V~~p~-~~~~~~~~~~~~~~~~~~~V~FFg------~~~~aWv~~~~l~p~~~~~ 74 (109)
T 1h3z_A 3 ERVNYKPGMRVLTKM-SGFPWWPSMVVTES-KMTSVARKSKPKRAGTFYPVIFFP------NKEYLWTGSDSLTPLTSEA 74 (109)
T ss_dssp CCCCCCTTCEEEEEE-TTEEEEEEEECCGG-GCCHHHHHTCCCSSSCEEEEEETT------TTCCEEEEGGGEEECCHHH
T ss_pred CcccCCCCCEEEEEe-CCcCCCCEEEcccH-HHhHHhhccCCCCCCCEEEEEEcC------CCCEEEECHHHeeeCCchH
Confidence 467899999999999 59999999999986 55677776543 6899999999 778999999999999865
Q ss_pred cccc-CccccccCChHHHHHHHHHHHH
Q 036712 294 MDKC-EPTQLHKSKISGFQIALEEAVL 319 (1020)
Q Consensus 294 ~~~~-~q~~~~~~k~~~f~~Aleea~~ 319 (1020)
.+.+ ++. + .|.+.+++|+++|..
T Consensus 75 ~~~~~~~~--~-~k~k~l~~Ay~~A~~ 98 (109)
T 1h3z_A 75 ISQFLEKP--K-PKTASLIKAYKMAQS 98 (109)
T ss_dssp HHHHHHSC--S-SCCHHHHHHHHHHHH
T ss_pred HHHHhhcc--c-cCCHHHHHHHHHHhc
Confidence 2333 222 1 245788888888854
No 27
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.71 E-value=3e-17 Score=167.18 Aligned_cols=112 Identities=19% Similarity=0.270 Sum_probs=82.6
Q ss_pred CcccEEEEecCCC--ccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeCC-----eEEEeccc--
Q 036712 876 EKHRVCFGKSGIH--GWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKISE-----EVVIDATN-- 946 (1020)
Q Consensus 876 ~~~~l~v~~s~~k--G~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~~-----~~vIDa~~-- 946 (1020)
....|.|++|.++ |+||||+++|++|++|++|.|++++..+++.. ....|+|.+.. .++||++.
T Consensus 25 LP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~-------~~~~y~w~i~~~~G~~~~~IDa~~e~ 97 (170)
T 3ep0_A 25 LPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDIC-------KNNNLMWEVFNEDGTVRYFIDASQED 97 (170)
T ss_dssp CCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC-----------------CEEEEECTTSSEEEEEECC---
T ss_pred CCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccc-------cCCceEEEEecCCCcEEEEEECCCCC
Confidence 3467889999776 79999999999999999999999988766431 23568888732 26999998
Q ss_pred CCCcccccCCCCC---CCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 036712 947 KGNIARLINHSCM---PNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPD 999 (1020)
Q Consensus 947 ~GNiaRfINHSC~---PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~ 999 (1020)
.||++|||||+|. +|+.+.. .+ .+|.++|+|||.+||||+|+|+.++.
T Consensus 98 ~~NWmR~Vn~A~~~~eqNl~a~q--~~---~~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 98 HRSWMTYIKCARNEQEQNLEVVQ--IG---TSIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp ---GGGGCEECSSTTTCCEEEEE--ET---TEEEEEESSCBCTTCBCEEEECC---
T ss_pred CcceeeeEEecCCcccCCeeeEE--EC---CEEEEEECcCcCCCCEEEEeeCHHHH
Confidence 7999999999996 7976643 33 48999999999999999999987754
No 28
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=99.69 E-value=1.4e-17 Score=160.68 Aligned_cols=69 Identities=36% Similarity=0.737 Sum_probs=59.6
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCC-------------chhhhccc-------CCCeEEEEEecccCCCCCcce
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQA-------------PEAVLRCC-------IPGCLCVMFFGYSKNGTQRDY 279 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~-------------p~~~~~~~-------~~~~~~V~FfG~~~~~~~~dy 279 (1020)
..|.+|||||||+ ++||||||+||||.... |+.|++.+ ....|||+||| +.++|
T Consensus 4 ~~~~~~dlVWAK~-~gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd-----~~~t~ 77 (130)
T 3l42_A 4 SPLDALDLVWAKC-RGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFD-----NKRTW 77 (130)
T ss_dssp SSSCTTCEEEECC-TTSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESS-----TTCCE
T ss_pred ccCCCCCEEEEec-ccCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCC-----CCCce
Confidence 4699999999999 69999999999997554 88888853 26789999999 46889
Q ss_pred eeeecCccccchhcc
Q 036712 280 GWVKQGMLFPFAEFM 294 (1020)
Q Consensus 280 ~W~~~~~i~py~e~~ 294 (1020)
+||.+++|+||....
T Consensus 78 aWv~~~~i~pl~~d~ 92 (130)
T 3l42_A 78 QWLPRTKLVPLGVNQ 92 (130)
T ss_dssp EEEEGGGEEESSSCH
T ss_pred EeecccceeecCCch
Confidence 999999999999763
No 29
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.65 E-value=8.4e-17 Score=167.03 Aligned_cols=124 Identities=21% Similarity=0.181 Sum_probs=97.0
Q ss_pred cCcccEEEEecCC--CccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeC--C--eEEEeccc--
Q 036712 875 TEKHRVCFGKSGI--HGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKIS--E--EVVIDATN-- 946 (1020)
Q Consensus 875 ~~~~~l~v~~s~~--kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~--~--~~vIDa~~-- 946 (1020)
+....|.|+.|.+ +|+||||++.|++|+.+++|.|++++..+++.. ....|+|.+. . .++||++.
T Consensus 55 SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~-------~~~~y~w~i~~~g~~~~~IDas~e~ 127 (196)
T 3dal_A 55 SLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKN-------ANRKYFWRIYSRGELHHFIDGFNEE 127 (196)
T ss_dssp TCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC----------CCTTEEEEEETTEEEEEEECCCTT
T ss_pred cCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhc-------cCCcceeeeccCCCEEEEEECCCCC
Confidence 4456788999977 899999999999999999999999987654321 2345778773 2 37999986
Q ss_pred CCCcccccCCCCC---CCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCCCeeeecCCcCcccc
Q 036712 947 KGNIARLINHSCM---PNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMF 1018 (1020)
Q Consensus 947 ~GNiaRfINHSC~---PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~~~~C~CGs~~CRg~ 1018 (1020)
.||++|||||+|. +|+.+.. .+ .+|.++|+|||.+||||+|+|+.++ ...+|.+.|+..
T Consensus 128 ~gNWmRfVn~A~~~~eqNl~a~q--~~---~~I~y~a~RdI~pGeELlvwYg~~Y--------~~~lg~p~~~~~ 189 (196)
T 3dal_A 128 KSNWMRYVNPAHSPREQNLAACQ--NG---MNIYFYTIKPIPANQELLVWYCRDF--------AERLHYPYPGEL 189 (196)
T ss_dssp SSCGGGGCEECSSTTTCCEEEEE--ET---TEEEEEESSCBCTTCBCEEEECHHH--------HHHTTCCCTTCC
T ss_pred CCceEEeEEecCCcccCCcEEEE--EC---CEEEEEECcccCCCCEEEEecCHHH--------HHHcCCCCCHHH
Confidence 8999999999996 6987643 33 4899999999999999999998654 345555555544
No 30
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.65 E-value=2.4e-16 Score=157.97 Aligned_cols=115 Identities=16% Similarity=0.118 Sum_probs=82.3
Q ss_pred cCcccEEEEec-CCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeC--C--eEEEeccc--C
Q 036712 875 TEKHRVCFGKS-GIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKIS--E--EVVIDATN--K 947 (1020)
Q Consensus 875 ~~~~~l~v~~s-~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~--~--~~vIDa~~--~ 947 (1020)
+....|.|+.| +++|+||||++.|++|+.+++|.|++++..++..+.. ....|+|.+. . .++||++. .
T Consensus 20 slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~~-----~~~~y~w~i~~~~~~~~~iD~~~~~~ 94 (151)
T 3db5_A 20 SLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTD-----KAVNHIWKIYHNGVLEFCIITTDENE 94 (151)
T ss_dssp TCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC----------------CCSEEEEEETTEEEEEEECCCTTT
T ss_pred cCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhcccc-----cCCCceEEEEeCCCEEEEEECcCCCC
Confidence 34456788876 4589999999999999999999999999877665421 1234677652 2 36899997 5
Q ss_pred CCcccccCCCCCC---CeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 036712 948 GNIARLINHSCMP---NCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPD 999 (1020)
Q Consensus 948 GNiaRfINHSC~P---N~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~ 999 (1020)
||++|||||+|.+ |+.+.. .+ .+|.++|+|||.+||||+|+|+.++.
T Consensus 95 ~NWmR~Vn~A~~~~eqNl~a~q--~~---~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 95 CNWMMFVRKARNREEQNLVAYP--HD---GKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp SCGGGGCEECSSTTTCCEEEEE--ET---TEEEEEESSCBCTTCBCEEEECC---
T ss_pred CcceeEEEecCCcccCceEEEE--EC---CEEEEEEccccCCCCEEEEecCHHHH
Confidence 9999999999965 987754 33 48999999999999999999998764
No 31
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.46 E-value=4.5e-14 Score=149.71 Aligned_cols=124 Identities=20% Similarity=0.158 Sum_probs=89.5
Q ss_pred cCcccEEEEecCCCccEEEEc-cccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEeC----CeEEEeccc--C
Q 036712 875 TEKHRVCFGKSGIHGWGLFAR-RHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKIS----EEVVIDATN--K 947 (1020)
Q Consensus 875 ~~~~~l~v~~s~~kG~GVfA~-~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i~----~~~vIDa~~--~ 947 (1020)
+....|.|++|.++|.|||+. +.|++|+.+++|.|++++..+++ ..|+|.+. ...+||++. .
T Consensus 69 SLP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~-----------~~y~wei~~~~g~~~~IDgsde~~ 137 (237)
T 3ray_A 69 TIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA-----------GFFSWLIVDKNNRYKSIDGSDETK 137 (237)
T ss_dssp TCCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC----------------CCEEEEECTTSCEEEEECCCTTT
T ss_pred cCCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc-----------ccceEEEEcCCCcEEEEecCCCCC
Confidence 344568999999999999987 89999999999999999764431 23666662 246899997 7
Q ss_pred CCcccccCCCCC---CCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCCCCCeeeecCCcCcccc
Q 036712 948 GNIARLINHSCM---PNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHDELKVPCLCKAPNCRMF 1018 (1020)
Q Consensus 948 GNiaRfINHSC~---PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~~~~~~C~CGs~~CRg~ 1018 (1020)
||++|||||+|. +|+.+.. .+ .+|.++|+|||.+||||+|+|+.++.. .+.+.|+...||..
T Consensus 138 gNWmRfVn~Ar~~~EqNL~A~q--~~---~~Iyy~a~RdI~pGeELlVwYg~~Y~~----~l~~~~~~~~~~~~ 202 (237)
T 3ray_A 138 ANWMRYVVISREEREQNLLAFQ--HS---ERIYFRACRDIRPGEWLRVWYSEDYMK----RLHSMSQETIHRNL 202 (237)
T ss_dssp SCGGGGCEECCCTTTCCEEEEE--ET---TEEEEEESSCBCTTCBCEEEECHHHHH----HHCC----------
T ss_pred CcceeEEEcCCCcccccceeEE--eC---CEEEEEEccccCCCCEEEEeeCHHHHH----Hhcccccchhcccc
Confidence 999999999996 5876643 33 489999999999999999999876532 35566777777643
No 32
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.33 E-value=5.1e-13 Score=133.80 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=78.9
Q ss_pred ccEEEEecCCCccEEEEccccCCCCEEEEEeeEEEehhHHhHHHHHhhhcCCceEEEEe------------CCeEEEecc
Q 036712 878 HRVCFGKSGIHGWGLFARRHIQEGEMVVEYRGEQVTQSIADLREKQYRKEGKDCYLFKI------------SEEVVIDAT 945 (1020)
Q Consensus 878 ~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~Geii~~~~~~~re~~y~~~~~~~Y~f~i------------~~~~vIDa~ 945 (1020)
..|.|.+ .|+||||++.|++||.+++|.|++++..++.. ..|++.+ +..++||++
T Consensus 23 ~~L~i~~---~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~----------~~~~~~v~~~d~~~~~~~~~~~~~iD~~ 89 (152)
T 3ihx_A 23 LVLYIDR---FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD----------CYIHLKVSLDKGDRKERDLHEDLWFELS 89 (152)
T ss_dssp TTEEECT---TTCSEEESSCBCSSCEECCCCSCEECSTTCCS----------SSCCCBC---------------CEECCC
T ss_pred cceEEee---cCCeEEECceecCCCEEEeeccEEcCHHHhcc----------CcceEEEEccccccccccCCccEEEEcc
Confidence 3466654 58999999999999999999999998765311 1122222 135789998
Q ss_pred c--CCCcccccCCCCC---CCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCC
Q 036712 946 N--KGNIARLINHSCM---PNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDP 998 (1020)
Q Consensus 946 ~--~GNiaRfINHSC~---PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~ 998 (1020)
. .||++|||||+|. +|+.+.. .+ .+|.+.|+|+|.+||||.|+|+.++
T Consensus 90 ~~~~~NWmr~vn~a~~~~eqNl~a~q--~~---~~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 90 DETLCNWMMFVRPAQNHLEQNLVAYQ--YG---HHVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp CTTTSCGGGGCCBCCSTTTCCEEEEE--CS---SSEEEEESSCBCTTCBCCEEECHHH
T ss_pred CCCCCcceeeeeccCCccCCCcEEEE--eC---CeEEEEEeeecCCCCEEEEechHHH
Confidence 6 6999999999997 6887643 33 4899999999999999999998654
No 33
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=99.33 E-value=3.1e-13 Score=138.98 Aligned_cols=61 Identities=26% Similarity=0.805 Sum_probs=52.7
Q ss_pred CcCccccccccccCCC-CCCceecCCCCcEEcCcccccchhhhcccC----CCceeCCCcCccccC
Q 036712 404 SEQYCGICKNIWHHSD-SGNWVCCDGCNVWVHAECDEISGKHFKDLE----HIDYYCPNCRVKFKF 464 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d-~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~----~~~Y~Cp~C~~~~~~ 464 (1020)
+|+|||||++.|++++ +..|||||.|++|||++|++|+++.++.+. +..|+||.|+.+++.
T Consensus 1 ~G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 1 SGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp -CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 5999999999999987 789999999999999999999998666653 247999999987654
No 34
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=99.29 E-value=1.1e-12 Score=119.27 Aligned_cols=71 Identities=35% Similarity=0.751 Sum_probs=58.9
Q ss_pred cccCccccccccccccCC-CceeeecC--CccccccccccccCCeEEEEeeecccc----ccccceEEecccccCCCC
Q 036712 688 LRIPTNLFLKSCIICKQT-HGSCTQCC--KCATYFHAMCASRAGYCMEIHSLERYG----KQITRKLIYCAVHRTPNP 758 (1020)
Q Consensus 688 ~~i~~~~~~~~C~iC~~~-~Ga~IqC~--~C~~~FHv~CAr~aGl~~e~~~~~~~g----~~~~~~~~yC~~H~~~~~ 758 (1020)
.+||++||+++|.+|+++ .||||||. +|.++||++||+.+|+.|++...+... ...+.+.+||++|++|..
T Consensus 9 ~NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~aGl~~~~~~~~~~~~~~~~~~v~~~~yC~~HsPpg~ 86 (87)
T 2lq6_A 9 MNIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGGTTFSVRKTAYCDVHTPPGS 86 (87)
T ss_dssp CCCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHHTCCEEEEEEEECTTTSCEEEEEEEECCGGGSSSSC
T ss_pred cCCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHCCCceEeecccccccCCccccceECeECcCCCCcCC
Confidence 578999999999999987 59999997 599999999999999999987654321 223467899999998753
No 35
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.11 E-value=2.5e-11 Score=104.14 Aligned_cols=58 Identities=31% Similarity=0.843 Sum_probs=47.9
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
..+.||++|++.|. ++..|||||.|+.|||..|++|+.+.++.+ ..|+||.|+.++..
T Consensus 4 ~e~~~C~~C~~~~~--~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~--~~~~C~~C~~k~~~ 61 (64)
T 1we9_A 4 GSSGQCGACGESYA--ADEFWICCDLCEMWFHGKCVKITPARAEHI--KQYKCPSCSNKSGP 61 (64)
T ss_dssp SSCCCCSSSCCCCC--SSSCEEECSSSCCEEETTTTTCCTTGGGGC--SSCCCHHHHTTTCS
T ss_pred CCCCCCCCCCCccC--CCCCEEEccCCCCCCCccccCcChhHhcCC--CcEECCCCcCcCCC
Confidence 35789999999884 357999999999999999999998755444 57999999976543
No 36
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.96 E-value=4.4e-10 Score=100.47 Aligned_cols=56 Identities=27% Similarity=0.688 Sum_probs=45.2
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
...|| ||++.|+ ++..|||||.|+.|||..|++|+.+....+ ..|+||.|+.+...
T Consensus 11 ~~~~C-~C~~~~d--~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~--~~~~C~~C~~~~~~ 66 (79)
T 1wep_A 11 VPVYC-LCRQPYN--VNHFMIECGLCQDWFHGSCVGIEEENAVDI--DIYHCPDCEAVFGP 66 (79)
T ss_dssp CCCCS-TTSCSCC--SSSCEEEBTTTCCEEEHHHHTCCHHHHTTC--SBBCCTTTTTTSCS
T ss_pred CccEE-EcCCccC--CCCceEEcCCCCCcEEeeecCcccccccCC--CeEECCCcccccCC
Confidence 35567 9999883 467999999999999999999998755433 57999999976543
No 37
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.87 E-value=1.6e-09 Score=103.12 Aligned_cols=55 Identities=16% Similarity=0.471 Sum_probs=42.6
Q ss_pred cCccccccccccC---CCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcC
Q 036712 405 EQYCGICKNIWHH---SDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCR 459 (1020)
Q Consensus 405 g~~C~iC~k~y~~---~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~ 459 (1020)
..+|.+|.+.-.. .+.+++|.|++|...+|..|.+++.++.+.+....++|+.|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 4678888765322 246799999999999999999987765556667778888887
No 38
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.86 E-value=2.4e-10 Score=98.35 Aligned_cols=52 Identities=25% Similarity=0.675 Sum_probs=44.9
Q ss_pred CccccccccccCCCCCCceecC-CCCcEEcCcccccchhhhccc---CCCceeCCCcC
Q 036712 406 QYCGICKNIWHHSDSGNWVCCD-GCNVWVHAECDEISGKHFKDL---EHIDYYCPNCR 459 (1020)
Q Consensus 406 ~~C~iC~k~y~~~d~~~wv~Cd-~C~~WvH~~C~~~~~~~~~~l---~~~~Y~Cp~C~ 459 (1020)
..|++|++.|++ +.+||+|| .|+.|||..|.+|+.+.++.| +...|+||.|.
T Consensus 9 ~~C~~C~~p~~~--~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 9 YPCGICTNEVND--DQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp CBCTTTCSBCCT--TSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCccCCCccCC--CCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 468999998865 46999999 999999999999999877766 45689999996
No 39
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.86 E-value=4.1e-10 Score=105.99 Aligned_cols=56 Identities=21% Similarity=0.599 Sum_probs=48.2
Q ss_pred CccccccccccCCCCCCceecC-CCCcEEcCcccccchhhhccc---CCCceeCCCcCcccc
Q 036712 406 QYCGICKNIWHHSDSGNWVCCD-GCNVWVHAECDEISGKHFKDL---EHIDYYCPNCRVKFK 463 (1020)
Q Consensus 406 ~~C~iC~k~y~~~d~~~wv~Cd-~C~~WvH~~C~~~~~~~~~~l---~~~~Y~Cp~C~~~~~ 463 (1020)
..|++|++.|+++ .+||+|| .|+.|||.+|++|+.+.++.| ++..|+||.|+.+..
T Consensus 4 ~~C~iC~~p~~~~--~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 4 YPCGACRSEVNDD--QDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CBCTTTCSBCCTT--SCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCCCccCCC--CCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 4799999999654 5799998 999999999999999877776 567899999997654
No 40
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.85 E-value=3e-09 Score=125.42 Aligned_cols=64 Identities=31% Similarity=0.555 Sum_probs=45.2
Q ss_pred ccccCCCCCCCeeEEEEEECC--------CeeEEEEEEccCCCCCCeEEEecCCCCCCC--------CCCCeeeecCCcC
Q 036712 951 ARLINHSCMPNCYARIMSVGD--------CESRIVLIAKTNVSAGDELTYDYLFDPDEH--------DELKVPCLCKAPN 1014 (1020)
Q Consensus 951 aRfINHSC~PN~~~~~v~v~~--------~~~ri~l~A~RdI~~GEELT~DY~~~~~~~--------~~~~~~C~CGs~~ 1014 (1020)
+.||||||.|||.+.....+. ...++.|+|+|||++|||||++|....... ....|.|.|. .
T Consensus 201 ~s~~NHSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C~--~ 278 (490)
T 3n71_A 201 LGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCE--H 278 (490)
T ss_dssp GGGCEECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCCH--H
T ss_pred hhhcccCCCCCeeEEecCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeCC--C
Confidence 567899999999865421110 012899999999999999999997543321 1235888884 6
Q ss_pred cc
Q 036712 1015 CR 1016 (1020)
Q Consensus 1015 CR 1016 (1020)
|.
T Consensus 279 C~ 280 (490)
T 3n71_A 279 CQ 280 (490)
T ss_dssp HH
T ss_pred CC
Confidence 64
No 41
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.81 E-value=2.1e-09 Score=88.47 Aligned_cols=48 Identities=35% Similarity=0.838 Sum_probs=39.6
Q ss_pred ccccccccccCCCCCCceecC-CCCcEEcCcccccchhhhcccCCCceeCCCcC
Q 036712 407 YCGICKNIWHHSDSGNWVCCD-GCNVWVHAECDEISGKHFKDLEHIDYYCPNCR 459 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd-~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~ 459 (1020)
-|++|++.|+ ++..||+|| .|+.|||..|.+|+.+..+ ...|+||.|+
T Consensus 4 ~cc~C~~p~~--~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~---~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCK--DKVDWVQCDGGCDEWFHQVCVGVSPEMAE---NEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCC--TTCCEEECTTTTCCEEETTTTTCCHHHHH---HSCCCCSCC-
T ss_pred cCCCCcCccC--CCCcEEEeCCCCCccCcccccCCCccccC---CCCEECCCCC
Confidence 4789999883 467999999 8999999999999987432 3679999996
No 42
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.79 E-value=3.2e-09 Score=101.35 Aligned_cols=45 Identities=27% Similarity=0.797 Sum_probs=37.1
Q ss_pred ccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCCceeeccCCC
Q 036712 595 CAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 595 C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~~W~C~~C~~ 642 (1020)
|.||+..+ +.+.||.||.|+.+||..|++ +..+|+ +.|+|..|..
T Consensus 61 C~~C~~~~--~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~ 107 (114)
T 2kwj_A 61 CILCGTSE--NDDQLLFCDDCDRGYHMYCLNPPVAEPPE-GSWSCHLCWE 107 (114)
T ss_dssp CTTTTCCT--TTTTEEECSSSCCEEETTTSSSCCSSCCS-SCCCCHHHHH
T ss_pred cCcccccC--CCCceEEcCCCCccccccccCCCccCCCC-CCeECccccc
Confidence 66666543 346899999999999999997 778888 8999999964
No 43
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.73 E-value=1.2e-09 Score=96.87 Aligned_cols=55 Identities=36% Similarity=0.877 Sum_probs=44.3
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhccc--CCCceeCCCcCcccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDL--EHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l--~~~~Y~Cp~C~~~~~ 463 (1020)
..|| ||++.|. +..|||||.|+.|||..|.+|+....+.| ....|+||.|+.++.
T Consensus 16 ~~~C-~C~~~~~---~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~ 72 (76)
T 1wem_A 16 ALYC-ICRQPHN---NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp CCCS-TTCCCCC---SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred CCEE-ECCCccC---CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccC
Confidence 4566 8998774 56899999999999999999998755444 356799999997643
No 44
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.68 E-value=5.3e-09 Score=91.82 Aligned_cols=52 Identities=27% Similarity=0.614 Sum_probs=40.7
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
..|| ||++.+ +++..|||||.|+.|+|..|.+|+... . ....|+||.|+.+.
T Consensus 16 ~~~C-~C~~~~--~~g~~mI~Cd~C~~W~H~~Cvg~~~~~--~-~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 16 KVDC-KCGTKD--DDGERMLACDGCGVWHHTRCIGINNAD--A-LPSKFLCFRCIELS 67 (72)
T ss_dssp EECC-TTCCCS--CCSSCEEECSSSCEEEETTTTTCCTTS--C-CCSCCCCHHHHHHC
T ss_pred ceEe-eCCCcc--CCCCcEEECCCCCCccCCeeeccCccc--c-CCCcEECCCccCCC
Confidence 4466 788865 446789999999999999999998741 1 24679999998654
No 45
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.66 E-value=6.6e-09 Score=90.96 Aligned_cols=52 Identities=40% Similarity=0.882 Sum_probs=47.5
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~ 642 (1020)
.+++.|.||+.+++.+.+.||+||.|+++||+.||++..+|+ +.|+|+.|..
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~-g~W~C~~C~~ 65 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPE-GQWLCRHCLQ 65 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCS-SCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCC-CCcCCccCcC
Confidence 467889999998877889999999999999999999999998 9999999975
No 46
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.65 E-value=7.2e-09 Score=89.99 Aligned_cols=49 Identities=22% Similarity=0.712 Sum_probs=40.0
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRV 460 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~ 460 (1020)
...|| ||++.+ ++..|||||.|+.|+|..|.+|+... + ...|+||.|+.
T Consensus 18 ~~~~C-iC~~~~---~~~~MIqCd~C~~WfH~~Cvgi~~~~---~-~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPF---AGRPMIECNECHTWIHLSCAKIRKSN---V-PEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCC---TTCCEEECTTTCCEEETTTTTCCTTS---C-CSSCCCHHHHT
T ss_pred CceEe-ECCCcC---CCCCEEECCCCCccccccccCcCccc---C-CCcEECCCCCC
Confidence 45677 999855 36789999999999999999999862 2 24699999984
No 47
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=98.63 E-value=5.2e-09 Score=92.60 Aligned_cols=55 Identities=27% Similarity=0.712 Sum_probs=42.9
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
..|| ||++.| +++..|||||.|+.|||..|.+++......+ ..|+||.|+.+...
T Consensus 10 ~~yC-iC~~~~--~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~--~~~~C~~C~~~~~~ 64 (75)
T 3kqi_A 10 PVYC-VCRLPY--DVTRFMIECDACKDWFHGSCVGVEEEEAPDI--DIYHCPNCEKTHGK 64 (75)
T ss_dssp CEET-TTTEEC--CTTSCEEECTTTCCEEEHHHHTCCTTTGGGB--SSCCCHHHHHHHCC
T ss_pred eeEE-ECCCcC--CCCCCEEEcCCCCCCEecccccccccccCCC--CEEECCCCcccCCC
Confidence 3444 999876 3467999999999999999999998744433 46999999976443
No 48
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.63 E-value=5.3e-08 Score=92.34 Aligned_cols=48 Identities=23% Similarity=0.733 Sum_probs=38.8
Q ss_pred cccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCCceeeccCCCCC
Q 036712 594 RCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFTSWVCRACEMPN 644 (1020)
Q Consensus 594 ~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~~W~C~~C~~~~ 644 (1020)
.|.||+..++ ++.|+.||.|+.+||..|+. +..+|+ +.|+|+.|....
T Consensus 56 ~C~~C~~~~~--~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGE--DSKMLVCDTCDKGYHTFCLQPVMKSVPT-NGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSC--CTTEEECSSSCCEEEGGGSSSCCSSCCS-SCCCCHHHHCCS
T ss_pred cccccCccCC--CCCeeECCCCCcHHhHHhcCCccccCCC-CCcCCcCCcCcC
Confidence 3677776543 36799999999999999996 667787 899999997644
No 49
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.62 E-value=6.2e-09 Score=91.97 Aligned_cols=53 Identities=30% Similarity=0.701 Sum_probs=42.9
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
+.||++|++.+ ++..||+||.|+.|||..|.+++.. ..+...|+||.|+.+.+
T Consensus 18 ~~~C~~C~~~~---~~~~mi~CD~C~~wfH~~Cv~~~~~---~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 18 IWICPGCNKPD---DGSPMIGCDDCDDWYHWPCVGIMAA---PPEEMQWFCPKCANKIK 70 (75)
T ss_dssp EECBTTTTBCC---SSCCEEECSSSSSEEEHHHHTCSSC---CCSSSCCCCTTTHHHHC
T ss_pred CcCCCCCCCCC---CCCCEEEcCCCCcccccccCCCCcc---CCCCCCEEChhccCchh
Confidence 46889998865 4568999999999999999999875 23346899999997543
No 50
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.56 E-value=1.5e-08 Score=92.39 Aligned_cols=52 Identities=40% Similarity=0.882 Sum_probs=47.3
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~ 642 (1020)
.+++.|.||+.+++.+.+.||.||.|+.+||+.||++..+|+ +.|+|+.|..
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~-g~W~C~~C~~ 74 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPE-GQWLCRHCLQ 74 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCS-SCCCCHHHHH
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCC-CceECccccC
Confidence 467899999998777788999999999999999999998888 9999999975
No 51
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.46 E-value=4.5e-08 Score=80.49 Aligned_cols=44 Identities=23% Similarity=0.737 Sum_probs=36.6
Q ss_pred cccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCc
Q 036712 410 ICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRV 460 (1020)
Q Consensus 410 iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~ 460 (1020)
||++.+ ++..|||||.|+.|+|..|.+|+.+.+ ...|+||.|+.
T Consensus 8 ~C~~~~---~~~~MI~Cd~C~~W~H~~Cvgi~~~~~----~~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPF---AGRPMIECNECHTWIHLSCAKIRKSNV----PEVFVCQKCRD 51 (52)
T ss_dssp TTCCBC---TTCCEEECTTTCCEEETTTTTCCGGGC----CSSCCCHHHHT
T ss_pred EeCCcC---CCCCEEEcCCCCccccccccCCCcccC----CCcEECcCCCC
Confidence 788754 468999999999999999999998632 24699999974
No 52
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.46 E-value=3e-08 Score=88.37 Aligned_cols=54 Identities=26% Similarity=0.715 Sum_probs=41.4
Q ss_pred cCccccccccccCCCCCCceecC--CCCcEEcCcccccchhhhccc--CCCceeCCCcCccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCD--GCNVWVHAECDEISGKHFKDL--EHIDYYCPNCRVKF 462 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd--~C~~WvH~~C~~~~~~~~~~l--~~~~Y~Cp~C~~~~ 462 (1020)
..|| ||++. ++++.||||| .|+.|+|..|.+|+......+ ....|+||.|+.++
T Consensus 16 ~~~C-iC~~~---~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 16 KVRC-VCGNS---LETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCC-SSCCC---CCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CEEe-ECCCc---CCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 4566 89986 3457999999 999999999999998643211 13569999999654
No 53
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=98.45 E-value=3.9e-08 Score=85.39 Aligned_cols=51 Identities=31% Similarity=0.753 Sum_probs=38.1
Q ss_pred ccccccccccCCCCCCceecCC--CCcEEcCcccccchhhhcccC-CCceeCCCcCcc
Q 036712 407 YCGICKNIWHHSDSGNWVCCDG--CNVWVHAECDEISGKHFKDLE-HIDYYCPNCRVK 461 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd~--C~~WvH~~C~~~~~~~~~~l~-~~~Y~Cp~C~~~ 461 (1020)
|| ||++ .++++.||+||+ |+.|+|..|.+|+.+..+... ...|+||.|+.+
T Consensus 12 ~C-~C~~---~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 12 RC-ICSS---TMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp CC-TTCC---CSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred Ee-ECCC---CcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 44 7875 235678999995 999999999999876443321 346999999854
No 54
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.44 E-value=6.2e-08 Score=112.30 Aligned_cols=61 Identities=33% Similarity=0.546 Sum_probs=46.0
Q ss_pred CcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCC--------CCCCeeeecCCcCcc
Q 036712 949 NIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEH--------DELKVPCLCKAPNCR 1016 (1020)
Q Consensus 949 NiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~--------~~~~~~C~CGs~~CR 1016 (1020)
..+.||||||.|||.+.. . + .+++|+|+|||++|||||++|....... ....|.|.| ..|+
T Consensus 200 ~~~s~~NHsC~PN~~~~~--~-~--~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C--~~C~ 268 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVF--N-G--PHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDC--FRCQ 268 (429)
T ss_dssp TTGGGCEECSSCSEEEEE--E-T--TEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCS--HHHH
T ss_pred hhhHhhCcCCCCCeEEEE--e-C--CEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeC--CCCC
Confidence 346789999999997754 2 3 4799999999999999999998654322 124577777 4665
No 55
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.43 E-value=1.3e-07 Score=82.73 Aligned_cols=49 Identities=29% Similarity=0.899 Sum_probs=38.9
Q ss_pred CcCccccccccccCCCCCCceecCC--CC-cEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDG--CN-VWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~--C~-~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...|| ||++.+ .++||+||. |. .|||..|.+|+.. +...|+||.|+.+.
T Consensus 15 ~~~~C-~C~~~~----~g~MI~CD~~~C~~~wfH~~Cvgl~~~-----p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 15 EPTYC-LCHQVS----YGEMIGCDNPDCSIEWFHFACVGLTTK-----PRGKWFCPRCSQES 66 (71)
T ss_dssp SCCCS-TTCCCS----CSSEECCSCSSCSCCCEETTTTTCSSC-----CSSCCCCTTTSSCS
T ss_pred CCCEE-ECCCCC----CCCEeEeeCCCCCCccEecccCCcCcC-----CCCCEECCCCCccc
Confidence 45678 898864 258999999 77 7999999998763 45679999998643
No 56
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.43 E-value=2.4e-07 Score=87.78 Aligned_cols=81 Identities=23% Similarity=0.590 Sum_probs=64.7
Q ss_pred CCCcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCC-CCceeeccCCCCCcccccCcCCcccCCCcEEEEEec
Q 036712 589 KWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQD-FTSWVCRACEMPNAERKWGALKPTDVQTLWVHVTCA 667 (1020)
Q Consensus 589 ~~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~-~~~W~C~~C~~~~~~~~gGaLk~t~i~~~WvHv~CA 667 (1020)
..+++.|.||+++++ .+.||.|+.|+..||..|.++...+. .+.|+|+.|.
T Consensus 4 ~~~~~~C~~C~~~g~--~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~-------------------------- 55 (111)
T 2ysm_A 4 GSSGANCAVCDSPGD--LLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK-------------------------- 55 (111)
T ss_dssp CCCCSCBTTTCCCCC--TTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC--------------------------
T ss_pred CCCCCCCcCCCCCCC--CcCCeECCCCCCCcChHHhCCccccccccCccCCcCC--------------------------
Confidence 347789999998753 35689999999999999997765432 3789999885
Q ss_pred cccCcccccCCCCccccccccccCccccccccccccCCC--ceeeecCCccccccccccccC
Q 036712 668 WFRPEIGFLNHEKMEPATGILRIPTNLFLKSCIICKQTH--GSCTQCCKCATYFHAMCASRA 727 (1020)
Q Consensus 668 lw~pev~~~d~~~~~pv~~i~~i~~~~~~~~C~iC~~~~--Ga~IqC~~C~~~FHv~CAr~a 727 (1020)
.|.+|++.+ ..++.|..|.++||..|....
T Consensus 56 ------------------------------~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~pp 87 (111)
T 2ysm_A 56 ------------------------------VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPV 87 (111)
T ss_dssp ------------------------------CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSC
T ss_pred ------------------------------cccccCccCCCCCeeECCCCCcHHhHHhcCCc
Confidence 477787653 358999999999999998753
No 57
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.42 E-value=4.5e-08 Score=82.64 Aligned_cols=48 Identities=29% Similarity=0.937 Sum_probs=38.9
Q ss_pred CcCccccccccccCCCCCCceecCC--CC-cEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDG--CN-VWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~--C~-~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
...|| +|++.+ +++||+||+ |. .|||..|.+|+.. +...|+||.|+.+
T Consensus 8 e~~yC-~C~~~~----~g~mi~CD~~~C~~~wfH~~Cvgl~~~-----p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 8 EPTYC-LCHQVS----YGEMIGCDNPDCPIEWFHFACVDLTTK-----PKGKWFCPRCVQE 58 (59)
T ss_dssp CCEET-TTTEEC----CSEEEECSCTTCSSCEEETGGGTCSSC-----CSSCCCCHHHHCC
T ss_pred CCcEE-ECCCCC----CCCeeEeeCCCCCCCCEecccCCcccC-----CCCCEECcCccCc
Confidence 46688 999865 257999999 76 7999999998763 4467999999864
No 58
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.40 E-value=1.3e-07 Score=86.48 Aligned_cols=49 Identities=29% Similarity=0.897 Sum_probs=39.3
Q ss_pred CcCccccccccccCCCCCCceecCC--CC-cEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDG--CN-VWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~--C~-~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...|| ||++.+. ++||+||. |. .|||..|.+|+.. +...|+||.|+.+.
T Consensus 35 e~~yC-iC~~~~~----g~MI~CD~~dC~~~WfH~~CVgl~~~-----p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 35 EPTYC-LCHQVSY----GEMIGCDNPDCSIEWFHFACVGLTTK-----PRGKWFCPRCSQES 86 (91)
T ss_dssp CCBCS-TTCCBCC----SCCCCCSCSSCSCCCCCSTTTTCSSC-----CCSSCCCTTTCCCC
T ss_pred CCcEE-ECCCCCC----CCEeEecCCCCCCCCEecccCCcCcC-----CCCCEECcCccCcC
Confidence 45678 9998652 58999999 66 7999999998763 34679999998654
No 59
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.38 E-value=6.5e-08 Score=82.48 Aligned_cols=49 Identities=31% Similarity=0.826 Sum_probs=39.0
Q ss_pred CcCccccccccccCCCCCCceecCCCC---cEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCN---VWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~---~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...|| +|++.+ .++||+||.|+ .|||..|.+|+.. +...|+||.|+.++
T Consensus 10 e~~yC-~C~~~~----~g~MI~CD~c~C~~~WfH~~Cvgl~~~-----p~~~w~Cp~C~~~r 61 (62)
T 2g6q_A 10 EPTYC-LCNQVS----YGEMIGCDNEQCPIEWFHFSCVSLTYK-----PKGKWYCPKCRGDN 61 (62)
T ss_dssp CCEET-TTTEEC----CSEEEECSCTTCSSCEEETGGGTCSSC-----CSSCCCCHHHHTCC
T ss_pred CCcEE-ECCCCC----CCCeeeeeCCCCCcccEecccCCcCcC-----CCCCEECcCcccCC
Confidence 45678 999864 24799999955 9999999999863 35789999998653
No 60
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.37 E-value=1.1e-07 Score=81.89 Aligned_cols=54 Identities=28% Similarity=0.669 Sum_probs=45.4
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCcccCCcc----c-CCCCceeeccCCCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTD----V-QDFTSWVCRACEMPN 644 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~----~-p~~~~W~C~~C~~~~ 644 (1020)
.++..|.||+.+++.+.+.||+||.|+.+||+.||+... + |+ +.|+|+.|....
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~-~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSD-EKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSS-CCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCC-CCEECCCCcCcc
Confidence 356889999998777788999999999999999998643 2 55 899999997643
No 61
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.36 E-value=4.6e-08 Score=99.79 Aligned_cols=55 Identities=31% Similarity=0.729 Sum_probs=44.0
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
..+.|| +|++.| ++++.|||||.|+.|+|..|.+++...... ...|+||.|+.+.
T Consensus 6 ~~~~~C-~C~~~~--~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~--~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 6 DTKLYC-ICKTPE--DESKFYIGCDRCQNWYHGRCVGILQSEAEL--IDEYVCPQCQSTE 60 (174)
T ss_dssp -CCEET-TTTEEC--CTTSCEEECTTTCCEEEHHHHTCCHHHHTT--CSSCCCHHHHHHH
T ss_pred CCCcEe-eCCCCC--CCCCCEeECCCCCchhChhhcCCchhhccC--ccCeecCCCcchh
Confidence 356789 999987 346799999999999999999998763332 3579999999764
No 62
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.30 E-value=1.2e-07 Score=80.28 Aligned_cols=48 Identities=27% Similarity=0.901 Sum_probs=37.8
Q ss_pred CcCccccccccccCCCCCCceecCC--CC-cEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDG--CN-VWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~--C~-~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
...|| ||++.+ +++||+||+ |. .|||..|.+|+. .+...|+||.|+.+
T Consensus 9 e~~~C-~C~~~~----~g~mi~CD~cdC~~~wfH~~Cvgl~~-----~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 9 EPTYC-LCHQVS----YGEMIGCDNPDCSIEWFHFACVGLTT-----KPRGKWFCPRCSQE 59 (60)
T ss_dssp CCEET-TTTEEC----CSEEEECSCTTCSSCEEETGGGTCSS-----CCSSCCCCHHHHC-
T ss_pred CCCEE-ECCCcC----CCCEEEeCCCCCCCceEehhcCCCCc-----CCCCCEECcCccCc
Confidence 45678 899864 257999999 55 899999999876 34577999999865
No 63
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.29 E-value=2e-07 Score=108.29 Aligned_cols=57 Identities=25% Similarity=0.390 Sum_probs=43.3
Q ss_pred cccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCCCCCCCC--------CCCeeeecC
Q 036712 950 IARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLFDPDEHD--------ELKVPCLCK 1011 (1020)
Q Consensus 950 iaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~~~~~~~--------~~~~~C~CG 1011 (1020)
.+.||||||.|||.+.. ++ ..+.|+|+|||++|||||++|........ ...|.|.|.
T Consensus 201 ~~s~~NHsC~PN~~~~~---~~--~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 265 (433)
T 3qww_A 201 DVALMNHSCCPNVIVTY---KG--TLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECR 265 (433)
T ss_dssp TGGGSEECSSCSEEEEE---ET--TEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCSH
T ss_pred cccccCCCCCCCceEEE---cC--CEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeECC
Confidence 45679999999997643 23 37899999999999999999976542211 246899994
No 64
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.27 E-value=5.4e-07 Score=83.71 Aligned_cols=45 Identities=36% Similarity=0.962 Sum_probs=35.8
Q ss_pred cccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 410 ICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 410 iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
||++.+ +++.||+||.|+.|||..|.+++.+ .++ ..|+||.|+.+
T Consensus 32 iC~~~~---~~~~mi~Cd~C~~w~H~~C~~~~~~---~~p-~~w~C~~C~~~ 76 (98)
T 2lv9_A 32 ICGFTH---DDGYMICCDKCSVWQHIDCMGIDRQ---HIP-DTYLCERCQPR 76 (98)
T ss_dssp TTSCCS---CSSCEEEBTTTCBEEETTTTTCCTT---SCC-SSBCCTTTSSS
T ss_pred ECCCcc---CCCcEEEcCCCCCcCcCcCCCCCcc---CCC-CCEECCCCcCC
Confidence 676643 4678999999999999999999764 333 36999999854
No 65
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.26 E-value=1.1e-06 Score=82.83 Aligned_cols=47 Identities=21% Similarity=0.545 Sum_probs=41.5
Q ss_pred CCCcccccccccCccCCCCcEEEcC--CCCchhcCcccCCcccCCCCceeeccCC
Q 036712 589 KWTTERCAICRWVEDWDYNKIIICN--RCQIAVHQECYGVTDVQDFTSWVCRACE 641 (1020)
Q Consensus 589 ~~~d~~C~VC~~~e~~~~n~Ll~Cd--~C~~~vH~~CYgv~~~p~~~~W~C~~C~ 641 (1020)
..+++.|.+|+++ ++||.|| .|..+||..|+++..+|+ +.|+|+.|.
T Consensus 12 ~~~~~~C~~C~~~-----G~ll~CD~~~Cp~~fH~~Cl~L~~~P~-g~W~Cp~c~ 60 (107)
T 4gne_A 12 QMHEDYCFQCGDG-----GELVMCDKKDCPKAYHLLCLNLTQPPY-GKWECPWHQ 60 (107)
T ss_dssp CSSCSSCTTTCCC-----SEEEECCSTTCCCEECTGGGTCSSCCS-SCCCCGGGB
T ss_pred CCCCCCCCcCCCC-----CcEeEECCCCCCcccccccCcCCcCCC-CCEECCCCC
Confidence 3467889999964 6899999 899999999999999998 999999883
No 66
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.22 E-value=4e-07 Score=82.95 Aligned_cols=52 Identities=23% Similarity=0.548 Sum_probs=44.1
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCcccCCcc------cCCCCceeeccCCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTD------VQDFTSWVCRACEMP 643 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~------~p~~~~W~C~~C~~~ 643 (1020)
.+..|.||+.++..+.+.||+||.|+.+||+.||+... +|+ +.|+|+.|...
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~-g~W~C~~C~~~ 72 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPR-LVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTT-CCCCCHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCC-CCeeCccccch
Confidence 35689999998776678999999999999999997542 566 99999999753
No 67
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.22 E-value=7.6e-07 Score=75.60 Aligned_cols=51 Identities=22% Similarity=0.763 Sum_probs=43.2
Q ss_pred CCCCCcccccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCCceeeccCCCC
Q 036712 587 SVKWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 587 ~~~~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~~W~C~~C~~~ 643 (1020)
....+++.|.||+.+ +.||.||.|..+||..|++ +..+|+ +.|+|+.|...
T Consensus 4 ~~d~~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~-g~W~C~~C~~~ 56 (61)
T 1mm2_A 4 GSDHHMEFCRVCKDG-----GELLCCDTCPSSYHIHCLNPPLPEIPN-GEWLCPRCTCP 56 (61)
T ss_dssp CSCSSCSSCTTTCCC-----SSCBCCSSSCCCBCSSSSSSCCSSCCS-SCCCCTTTTTT
T ss_pred cccCCCCcCCCCCCC-----CCEEEcCCCCHHHcccccCCCcCcCCC-CccCChhhcCc
Confidence 344567889999974 5799999999999999997 677887 89999999764
No 68
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.20 E-value=6.5e-07 Score=85.37 Aligned_cols=77 Identities=25% Similarity=0.653 Sum_probs=61.9
Q ss_pred ccccccccCcc-----CCCCcEEEcCCCCchhcCcccCCc-----ccCCCCceeeccCCCCCcccccCcCCcccCCCcEE
Q 036712 593 ERCAICRWVED-----WDYNKIIICNRCQIAVHQECYGVT-----DVQDFTSWVCRACEMPNAERKWGALKPTDVQTLWV 662 (1020)
Q Consensus 593 ~~C~VC~~~e~-----~~~n~Ll~Cd~C~~~vH~~CYgv~-----~~p~~~~W~C~~C~~~~~~~~gGaLk~t~i~~~Wv 662 (1020)
+.|.+|..++. .+.++||.|+.|+..+|..|.+.. .++. +.|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~-~~W~C~~C~--------------------- 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKT-YKWQCIECK--------------------- 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHH-TTCCCGGGC---------------------
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCC-CccCccccC---------------------
Confidence 56999987652 235699999999999999999876 3444 789998884
Q ss_pred EEEeccccCcccccCCCCccccccccccCccccccccccccCC--CceeeecCCcccccccccccc
Q 036712 663 HVTCAWFRPEIGFLNHEKMEPATGILRIPTNLFLKSCIICKQT--HGSCTQCCKCATYFHAMCASR 726 (1020)
Q Consensus 663 Hv~CAlw~pev~~~d~~~~~pv~~i~~i~~~~~~~~C~iC~~~--~Ga~IqC~~C~~~FHv~CAr~ 726 (1020)
.|.+|++. .+.++.|..|..+||..|...
T Consensus 60 -----------------------------------~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~p 90 (114)
T 2kwj_A 60 -----------------------------------SCILCGTSENDDQLLFCDDCDRGYHMYCLNP 90 (114)
T ss_dssp -----------------------------------CCTTTTCCTTTTTEEECSSSCCEEETTTSSS
T ss_pred -----------------------------------ccCcccccCCCCceEEcCCCCccccccccCC
Confidence 37777753 578999999999999999875
No 69
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.14 E-value=6.5e-07 Score=81.71 Aligned_cols=47 Identities=32% Similarity=0.834 Sum_probs=37.9
Q ss_pred CcCccccccccccCCCCCCceecCCCC---cEEcCcccccchhhhcccCCCceeCCC-cCc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCN---VWVHAECDEISGKHFKDLEHIDYYCPN-CRV 460 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~---~WvH~~C~~~~~~~~~~l~~~~Y~Cp~-C~~ 460 (1020)
...|| ||++.+. ++||+||.|+ .|||..|++|+.. +...|+||. |+.
T Consensus 25 ~~~yC-iC~~~~~----g~MI~CD~c~C~~eWfH~~CVgl~~~-----p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 25 EEVYC-FCRNVSY----GPMVACDNPACPFEWFHYGCVGLKQA-----PKGKWYCSKDCKE 75 (90)
T ss_dssp CSCCS-TTTCCCS----SSEECCCSSSCSCSCEETTTSSCSSC-----TTSCCCSSHHHHH
T ss_pred CCcEE-EeCCCCC----CCEEEecCCCCccccCcCccCCCCcC-----CCCCccCChhhcc
Confidence 45678 9988532 3799999988 9999999999864 346799999 984
No 70
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.14 E-value=1.2e-06 Score=102.31 Aligned_cols=86 Identities=20% Similarity=0.476 Sum_probs=49.9
Q ss_pred cCccccCCCCCcCCCCccccccccccCcccchhhHhhhcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhh
Q 036712 365 KVARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKH 444 (1020)
Q Consensus 365 ~~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~ 444 (1020)
|...+|..||....... -.. +-=..|-.+-+....+.-++.. ++.+..||+||.|+.|||..|++|+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~s~kk~~~~--~n~~~~mI~CD~C~~WfH~~CVgi~~~~ 79 (528)
T 3pur_A 10 KESDRCGGCGKFTHEDD--LIA------LEEEKKKEKEKPLMSKKKSHHH--KKNDFQWIGCDSCQTWYHFLCSGLEQFE 79 (528)
T ss_dssp CCSCCCTTTCCCC---------------------------CCSCCCTTTT--TTSTTSEEECTTTCCEEEGGGTTCCGGG
T ss_pred CccchhhcccCCCchhh--HHH------HHHHhhhhhhhccccccccccC--CCcCCCEEECCCCCcCCCCcCCCCChhH
Confidence 45678999998754431 000 0001122222222222222222 3457899999999999999999999975
Q ss_pred hcccCCCceeCCCcCccc
Q 036712 445 FKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 445 ~~~l~~~~Y~Cp~C~~~~ 462 (1020)
.+.+ ..|+||.|+...
T Consensus 80 a~~~--~~y~Cp~C~~~~ 95 (528)
T 3pur_A 80 YYLY--EKFFCPKCVPHT 95 (528)
T ss_dssp TTTE--EECCCTTTHHHH
T ss_pred hcCC--CeEECcCCcCCC
Confidence 5554 569999999754
No 71
>1ufn_A Putative nuclear protein homolog 5830484A20RIK; SAND domain, KDWK motif, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.217.1.1
Probab=98.13 E-value=5.3e-07 Score=82.00 Aligned_cols=67 Identities=21% Similarity=0.369 Sum_probs=56.4
Q ss_pred cCCCceeEeecccccccccccce--eeeccccCCC-cccCchhhhhccCc-cccCcccceeecCcccchhhHH
Q 036712 486 VLPDKIMVVCNDVEGAYFPKLHL--VVCRCRSCGP-KKLTLSEWERHTGC-RAKKWKYSVKVLGTMLPLGKWT 554 (1020)
Q Consensus 486 ~~~e~l~V~C~~~~g~l~~k~~~--i~CkC~~c~~-~~~SpSefE~h~Gs-r~K~wk~sIr~k~~~~pL~~~l 554 (1020)
.+...|+|+|+.++|+|+.++.. +.-+||+..+ +++||+|||..+|. ++|+|+.||++.+.+ |..++
T Consensus 12 d~~~~lPVtCG~~~G~L~k~k~~~G~~~kCI~~~dg~w~TP~EFe~~~g~~~sKdWKrSIr~~G~~--Lr~Lm 82 (94)
T 1ufn_A 12 DFSPTLPVTCGKAKGTLFQEKLKQGASKKCIQNEAGDWLTVKEFLNEGGRATSKDWKGVIRCNGET--LRHLE 82 (94)
T ss_dssp GGSSEEEEEETTEEEEEEHHHHHSCTTSCCEECTTCCEECHHHHHHHHTCTTCSCHHHHCEETTEE--HHHHH
T ss_pred ccCCccceeecCcEEEEEHHHhcCCCCcccEEeCCCcEEChHHhhhhcCcccccCcceeeEECCEe--HHHHH
Confidence 34778999999999999977644 3558999985 68999999999998 999999999999875 55555
No 72
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.12 E-value=1.1e-06 Score=83.54 Aligned_cols=80 Identities=23% Similarity=0.624 Sum_probs=62.9
Q ss_pred CcccccccccCcc----CCCCcEEEcCCCCchhcCcccCCc-----ccCCCCceeeccCCCCCcccccCcCCcccCCCcE
Q 036712 591 TTERCAICRWVED----WDYNKIIICNRCQIAVHQECYGVT-----DVQDFTSWVCRACEMPNAERKWGALKPTDVQTLW 661 (1020)
Q Consensus 591 ~d~~C~VC~~~e~----~~~n~Ll~Cd~C~~~vH~~CYgv~-----~~p~~~~W~C~~C~~~~~~~~gGaLk~t~i~~~W 661 (1020)
....|.+|...+. .+.++||.|+.|+..+|.+|+++. .++. +.|+|+.|+
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~-~~W~C~~C~-------------------- 62 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKA-LRWQCIECK-------------------- 62 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHT-SCCCCTTTC--------------------
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhc-cccccccCC--------------------
Confidence 3567999987642 234689999999999999999864 3445 889999995
Q ss_pred EEEEeccccCcccccCCCCccccccccccCccccccccccccCC---CceeeecCCccccccccccccC
Q 036712 662 VHVTCAWFRPEIGFLNHEKMEPATGILRIPTNLFLKSCIICKQT---HGSCTQCCKCATYFHAMCASRA 727 (1020)
Q Consensus 662 vHv~CAlw~pev~~~d~~~~~pv~~i~~i~~~~~~~~C~iC~~~---~Ga~IqC~~C~~~FHv~CAr~a 727 (1020)
.|.+|+.. .+..+.|..|..+||..|....
T Consensus 63 ------------------------------------~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~ 95 (112)
T 3v43_A 63 ------------------------------------TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPP 95 (112)
T ss_dssp ------------------------------------CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSC
T ss_pred ------------------------------------ccccccCcCCCccceEEcCCCCCeeecccCCCC
Confidence 37777754 2688999999999999997543
No 73
>1oqj_A Glucocorticoid modulatory element binding protein-1; SAND domain, alpha-beta fold, KDWK motif, zinc-binding motif, DNA binding protein; 1.55A {Homo sapiens} SCOP: d.217.1.1
Probab=98.11 E-value=6.2e-07 Score=82.18 Aligned_cols=65 Identities=17% Similarity=0.306 Sum_probs=55.7
Q ss_pred CCceeEeecccccccccccc---eeeeccccCCCcccCchhhhhccCc-cccCcccceeecCcccchhhHH
Q 036712 488 PDKIMVVCNDVEGAYFPKLH---LVVCRCRSCGPKKLTLSEWERHTGC-RAKKWKYSVKVLGTMLPLGKWT 554 (1020)
Q Consensus 488 ~e~l~V~C~~~~g~l~~k~~---~i~CkC~~c~~~~~SpSefE~h~Gs-r~K~wk~sIr~k~~~~pL~~~l 554 (1020)
...|+|+|+.++|+|+.++. .+.-+||+..++++||+|||..+|. ++|+|+.+|++.+.+ |..++
T Consensus 7 e~~lPVtCG~~~GiL~~~kf~~~G~~~KCI~~~~~w~TP~EFe~~~gk~~sKdWK~sIR~~G~~--L~~Lm 75 (97)
T 1oqj_A 7 EIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIM--LRKMM 75 (97)
T ss_dssp EEEEEEEETTEEEEEEGGGCCTTCTTSCCEEETTEEECHHHHHHHTTCGGGSCHHHHSEETTEE--HHHHH
T ss_pred ceeccEeeCCeEEEEEhhhhccCCCCccCccCCCEEEChHHHhhhcCcCCCCCcchheEECCeE--HHHHH
Confidence 34689999999999876664 3778999999999999999999998 999999999999975 44444
No 74
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.09 E-value=1.7e-06 Score=74.66 Aligned_cols=48 Identities=27% Similarity=0.580 Sum_probs=40.9
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCccc--CCcccCCCCceeeccCCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECY--GVTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CY--gv~~~p~~~~W~C~~C~~~ 643 (1020)
.++..|.||+++ +.||.||.|..+||..|+ .+..+|+ +.|+|..|...
T Consensus 10 ~~~~~C~vC~~~-----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~-g~W~C~~C~~~ 59 (66)
T 2lri_C 10 APGARCGVCGDG-----TDVLRCTHCAAAFHWRCHFPAGTSRPG-TGLRCRSCSGD 59 (66)
T ss_dssp CTTCCCTTTSCC-----TTCEECSSSCCEECHHHHCTTTCCCCS-SSCCCTTTTTC
T ss_pred CCCCCcCCCCCC-----CeEEECCCCCCceecccCCCccCcCCC-CCEECccccCC
Confidence 355789999865 469999999999999999 5678888 89999999754
No 75
>1h5p_A Nuclear autoantigen SP100-B; transcription, DNA binding, SAND domain, KDWK, nuclear protein, alternative splicing; NMR {Homo sapiens} SCOP: d.217.1.1
Probab=98.08 E-value=5.1e-07 Score=82.16 Aligned_cols=65 Identities=23% Similarity=0.394 Sum_probs=55.3
Q ss_pred CCceeEeecccccccccccce--eeeccccCCC-cccCchhhhhccCc-cccCcccceeecCcccchhhHH
Q 036712 488 PDKIMVVCNDVEGAYFPKLHL--VVCRCRSCGP-KKLTLSEWERHTGC-RAKKWKYSVKVLGTMLPLGKWT 554 (1020)
Q Consensus 488 ~e~l~V~C~~~~g~l~~k~~~--i~CkC~~c~~-~~~SpSefE~h~Gs-r~K~wk~sIr~k~~~~pL~~~l 554 (1020)
...|+|+|+.++|+|+.++.. +.-+||+..+ +++||+|||..+|. ++|+|+.||++.+.+ |..++
T Consensus 9 ~~~lPVtCG~~~G~L~k~kf~~G~~~KCI~~~~g~w~TP~EFe~~~g~~~sKdWKrSIR~~G~~--L~~Lm 77 (95)
T 1h5p_A 9 QSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRCGGYT--LKVLM 77 (95)
T ss_dssp GSEEEEEETTEEEEEEHHHHTTGGGSCCEEETTTEEECHHHHHHHHTCSTTCCHHHHCEETTEE--HHHHH
T ss_pred CCccceeeCCcEEEEehhhhcCCCCccCeEeCCCeEEChHHhhhhcCcccCcCcceeeEECCEE--HHHHH
Confidence 457899999999999987754 5668999965 68999999999998 999999999999976 44444
No 76
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.08 E-value=6.7e-07 Score=104.94 Aligned_cols=54 Identities=31% Similarity=0.768 Sum_probs=43.1
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
..|| +|++.| ++++.|||||.|+.|+|..|.+++....... ..|+||.|+.++.
T Consensus 37 ~~yC-~C~~~~--d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~--~~~~C~~C~~~~~ 90 (488)
T 3kv5_D 37 PVYC-VCRQPY--DVNRFMIECDICKDWFHGSCVGVEEHHAVDI--DLYHCPNCAVLHG 90 (488)
T ss_dssp CEET-TTTEEC--CTTSCEEEBTTTCCEEEHHHHTCCGGGGGGE--EEBCCHHHHHHHC
T ss_pred CeEE-eCCCcC--CCCCCeEEccCCCCceeeeecCcCcccccCC--CEEECCCCcCCcC
Confidence 3444 999877 3368999999999999999999998744433 4699999997654
No 77
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=4.7e-07 Score=79.00 Aligned_cols=48 Identities=31% Similarity=0.863 Sum_probs=37.9
Q ss_pred cCccccccccccCCCCCCceecCCCC---cEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCN---VWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~---~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
..|| ||++++ .++||+||.|+ .|||..|.+|+.. +...|+||.|+.+.
T Consensus 6 ~~yC-~C~~~~----~g~MI~CD~cdC~~~WfH~~Cvgl~~~-----p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 6 SGYC-ICNQVS----YGEMVGCDNQDCPIEWFHYGCVGLTEA-----PKGKWYCPQCTAAM 56 (70)
T ss_dssp CCCS-TTSCCC----CSSEECCSCTTCSCCCEEHHHHTCSSC-----CSSCCCCHHHHHHH
T ss_pred CeEE-EcCCCC----CCCEeEeCCCCCCccCCcccccccCcC-----CCCCEECCCCCccc
Confidence 4566 698863 24899999986 8999999999874 35679999998653
No 78
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.05 E-value=1.2e-06 Score=75.44 Aligned_cols=49 Identities=27% Similarity=0.773 Sum_probs=42.3
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCCceeeccCCCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFTSWVCRACEMPN 644 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~~W~C~~C~~~~ 644 (1020)
.+++.|.||+.+ +.||.||.|..+||..|++ +..+|. +.|+|+.|....
T Consensus 6 ~~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~ppl~~~P~-g~W~C~~C~~~~ 56 (66)
T 1xwh_A 6 KNEDECAVCRDG-----GELICCDGCPRAFHLACLSPPLREIPS-GTWRCSSCLQAT 56 (66)
T ss_dssp SCCCSBSSSSCC-----SSCEECSSCCCEECTTTSSSCCSSCCS-SCCCCHHHHHTC
T ss_pred CCCCCCccCCCC-----CCEEEcCCCChhhcccccCCCcCcCCC-CCeECccccCcc
Confidence 467889999975 4799999999999999998 677888 899999997543
No 79
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.03 E-value=1.7e-06 Score=70.58 Aligned_cols=46 Identities=37% Similarity=0.936 Sum_probs=40.1
Q ss_pred cccccccCccCCCCcEEEcCCCCchhcCccc--CCcccCCCCceeeccCCC
Q 036712 594 RCAICRWVEDWDYNKIIICNRCQIAVHQECY--GVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 594 ~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CY--gv~~~p~~~~W~C~~C~~ 642 (1020)
.|.||+..+ +.+.||.||.|+..||..|+ ++..+|+ +.|+|+.|..
T Consensus 2 ~C~vC~~~~--~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~-g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKG--EDDKLILCDECNKAFHLFCLRPALYEVPD-GEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSS--CCSCCEECTTTCCEECHHHHCTTCCSCCS-SCCSCTTTSC
T ss_pred CCCCCCCCC--CCCCEEECCCCChhhCcccCCCCcCCCCC-CcEECcCccc
Confidence 599999875 35689999999999999999 6778888 8999999975
No 80
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.02 E-value=5.2e-07 Score=104.52 Aligned_cols=51 Identities=27% Similarity=0.643 Sum_probs=42.3
Q ss_pred cccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 410 ICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 410 iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
+|++.| ++++.|||||.|+.|+|..|.+++....... ..|+||.|+.++..
T Consensus 9 iC~~~~--d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~--~~y~C~~C~~~~~~ 59 (447)
T 3kv4_A 9 LCRLPY--DVTRFMIECDMCQDWFHGSCVGVEEEKAADI--DLYHCPNCEVLHGP 59 (447)
T ss_dssp TTTEEC--CTTSCEEECTTTCCEEEHHHHTCCHHHHTTE--EECCCHHHHHHHCC
T ss_pred eCCCcC--CCCCCeEEcCCCCcccccccCCcCcccccCC--CEEECCCCccccCC
Confidence 999987 3468999999999999999999998744433 56999999976553
No 81
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=98.02 E-value=1.8e-06 Score=82.40 Aligned_cols=60 Identities=22% Similarity=0.404 Sum_probs=43.9
Q ss_pred hcCcCccccccccccCCC-CCCceecCCCCcEEcCcccccchhhhccc-CCCceeCCCcCcc
Q 036712 402 QKSEQYCGICKNIWHHSD-SGNWVCCDGCNVWVHAECDEISGKHFKDL-EHIDYYCPNCRVK 461 (1020)
Q Consensus 402 ~~~g~~C~iC~k~y~~~d-~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l-~~~~Y~Cp~C~~~ 461 (1020)
.....+|..|.+.+...+ +..||+|+.|+.|||..|+++..+.+-+- ....|.||.|+..
T Consensus 53 ~~~c~~c~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 53 SVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp TCBCTTTCCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred cccccccCcccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 345667777877776665 67799999999999999999876633211 1334999999954
No 82
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=97.99 E-value=4.9e-06 Score=75.51 Aligned_cols=49 Identities=24% Similarity=0.808 Sum_probs=42.8
Q ss_pred CCCcccccccccCccCCCCcEEEcCCCCchhcCccc--CCcccCCCCceeeccCCCC
Q 036712 589 KWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECY--GVTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 589 ~~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CY--gv~~~p~~~~W~C~~C~~~ 643 (1020)
..+++.|.||+.+ +.||.||.|+.+||..|+ ++..+|+ +.|+|+.|...
T Consensus 22 d~n~~~C~vC~~~-----g~LL~CD~C~~~fH~~Cl~PpL~~~P~-g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP-----GDLVMCNQCEFCFHLDCHLPALQDVPG-EEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS-----SCCEECTTSSCEECTTSSSTTCCCCCS-SSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC-----CCEEECCCCCCceecccCCCCCCCCcC-CCcCCccccCC
Confidence 3467899999986 469999999999999999 7788888 99999999853
No 83
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.93 E-value=3.1e-06 Score=71.50 Aligned_cols=47 Identities=21% Similarity=0.819 Sum_probs=41.1
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCCceeeccCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~~W~C~~C~~ 642 (1020)
.+++.|.||+.+ +.|+.||.|..+||..|++ +..+|. +.|+|+.|..
T Consensus 3 ~~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~-g~W~C~~C~~ 51 (60)
T 2puy_A 3 IHEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPK-GMWICPRCQD 51 (60)
T ss_dssp CCCSSCTTTCCC-----SSCEECSSSSCEECGGGSSSCCSSCCC-SCCCCHHHHH
T ss_pred CCCCCCcCCCCC-----CcEEEcCCCCcCEECCcCCCCcCCCCC-CceEChhccC
Confidence 367889999975 5799999999999999997 677887 8999999964
No 84
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.91 E-value=4.6e-06 Score=69.48 Aligned_cols=47 Identities=21% Similarity=0.803 Sum_probs=40.8
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCCceeeccCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~~W~C~~C~~ 642 (1020)
.+++.|.||+.. +.||.||.|..+||..|++ +..+|. +.|+|+.|..
T Consensus 7 ~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~-g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPK-GMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS-----SCCEECSSSSCEECSSSSSSCCCSCCC-SSCCCHHHHC
T ss_pred CCCCCCccCCCC-----CeEEEcCCCCcceECccCCCCcCCCCC-CceEChhhhC
Confidence 457889999975 5799999999999999997 677887 8999999953
No 85
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=97.86 E-value=6.8e-06 Score=67.02 Aligned_cols=49 Identities=22% Similarity=0.662 Sum_probs=38.7
Q ss_pred ccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 407 YCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
+|.+|++. .++..||.||+|++|||..|.... +..++..+++||.|+..
T Consensus 2 ~C~vC~~~---~~~~~ll~Cd~C~~~~H~~Cl~p~---l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKK---GEDDKLILCDECNKAFHLFCLRPA---LYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCS---SCCSCCEECTTTCCEECHHHHCTT---CCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCC---CCCCCEEECCCCChhhCcccCCCC---cCCCCCCcEECcCcccc
Confidence 58888863 346789999999999999998643 23466778999999853
No 86
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.83 E-value=4.6e-06 Score=76.58 Aligned_cols=49 Identities=20% Similarity=0.662 Sum_probs=42.5
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCCceeeccCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~~W~C~~C~~ 642 (1020)
++..|.||+..++ .+.||.||.|+.+||..|++ +..+|. +.|+|+.|..
T Consensus 15 ~~~~C~vC~~~~~--~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~-g~W~C~~C~~ 65 (92)
T 2e6r_A 15 DSYICQVCSRGDE--DDKLLFCDGCDDNYHIFCLLPPLPEIPR-GIWRCPKCIL 65 (92)
T ss_dssp CCCCCSSSCCSGG--GGGCEECTTTCCEECSSSSSSCCSSCCS-SCCCCHHHHH
T ss_pred CCCCCccCCCcCC--CCCEEEcCCCCchhccccCCCCcccCCC-CCcCCccCcC
Confidence 5678999998753 46899999999999999997 777888 8999999975
No 87
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.81 E-value=6.9e-06 Score=69.67 Aligned_cols=46 Identities=28% Similarity=0.796 Sum_probs=40.0
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCcccCC--cccCCCCceeeccCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGV--TDVQDFTSWVCRACEM 642 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv--~~~p~~~~W~C~~C~~ 642 (1020)
+++.|.||+.+ +.||.||.|..+||..|++. ..+|+ +.|+|+.|..
T Consensus 10 ~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~p~l~~~p~-g~W~C~~C~~ 57 (61)
T 2l5u_A 10 HQDYCEVCQQG-----GEIILCDTCPRAYHMVCLDPDMEKAPE-GKWSCPHCEK 57 (61)
T ss_dssp CCSSCTTTSCC-----SSEEECSSSSCEEEHHHHCTTCCSCCC-SSCCCTTGGG
T ss_pred CCCCCccCCCC-----CcEEECCCCChhhhhhccCCCCCCCCC-CceECccccc
Confidence 56789999975 58999999999999999976 56777 8999999974
No 88
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.72 E-value=2.2e-05 Score=69.66 Aligned_cols=49 Identities=24% Similarity=0.748 Sum_probs=41.2
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCC-ceeeccCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFT-SWVCRACEM 642 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~-~W~C~~C~~ 642 (1020)
.+..|.||+..+ +.+.||.||.|+.+||..|++ +..+|+ + .|+|+.|..
T Consensus 25 ~~c~C~vC~~~~--~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~-g~~W~C~~C~~ 76 (77)
T 2e6s_A 25 HSCSCRVCGGKH--EPNMQLLCDECNVAYHIYCLNPPLDKVPE-EEYWYCPSCKT 76 (77)
T ss_dssp SSSSCSSSCCCC--CSTTEEECSSSCCEEETTSSSSCCSSCCC-SSCCCCTTTCC
T ss_pred CCCCCcCcCCcC--CCCCEEEcCCCCccccccccCCCccCCCC-CCCcCCcCccC
Confidence 345789998754 457899999999999999997 778888 6 999999964
No 89
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.68 E-value=1e-05 Score=78.11 Aligned_cols=42 Identities=29% Similarity=0.843 Sum_probs=34.2
Q ss_pred CceecCCCCcEEcCcccccchhhhcccC----CCceeCCCcCcccc
Q 036712 422 NWVCCDGCNVWVHAECDEISGKHFKDLE----HIDYYCPNCRVKFK 463 (1020)
Q Consensus 422 ~wv~Cd~C~~WvH~~C~~~~~~~~~~l~----~~~Y~Cp~C~~~~~ 463 (1020)
.||+||.|+.|+|.+|.+++++.+..+. ...|.||.|..+..
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~~ 46 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHV 46 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTSC
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccccc
Confidence 4999999999999999999987554442 44699999997654
No 90
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.64 E-value=2.4e-05 Score=68.23 Aligned_cols=46 Identities=28% Similarity=0.833 Sum_probs=39.0
Q ss_pred cccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCC-ceeeccCCC
Q 036712 594 RCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFT-SWVCRACEM 642 (1020)
Q Consensus 594 ~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~-~W~C~~C~~ 642 (1020)
.|.||+..+ +.+.||.||.|..+||..|++ +..+|+ + .|+|+.|..
T Consensus 20 ~C~~C~~~~--~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~-g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQ--DPDKQLMCDECDMAFHIYCLDPPLSSVPS-EDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCS--CGGGEEECTTTCCEEEGGGSSSCCSSCCS-SSCCCCTTTSC
T ss_pred CCcCCCCcC--CCCCEEEcCCCCCceecccCCCCcCCCCC-CCCcCCcCccC
Confidence 567888654 357899999999999999998 778888 6 999999974
No 91
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.64 E-value=5.2e-05 Score=67.31 Aligned_cols=48 Identities=27% Similarity=0.731 Sum_probs=38.1
Q ss_pred ccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCC-ceeCCCcCc
Q 036712 407 YCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHI-DYYCPNCRV 460 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~-~Y~Cp~C~~ 460 (1020)
+|.+|++ .++++.||.||.|+.+||..|.... +..++.. +++||.|..
T Consensus 28 ~C~vC~~---~~~~~~ll~CD~C~~~yH~~Cl~Pp---l~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGG---KHEPNMQLLCDECNVAYHIYCLNPP---LDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCC---CCCSTTEEECSSSCCEEETTSSSSC---CSSCCCSSCCCCTTTCC
T ss_pred CCcCcCC---cCCCCCEEEcCCCCccccccccCCC---ccCCCCCCCcCCcCccC
Confidence 5777875 3468899999999999999998743 2345666 899999974
No 92
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=97.59 E-value=3.6e-05 Score=79.19 Aligned_cols=48 Identities=23% Similarity=0.749 Sum_probs=41.3
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCccc--CCcccCCCCceeeccCCCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECY--GVTDVQDFTSWVCRACEMPN 644 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CY--gv~~~p~~~~W~C~~C~~~~ 644 (1020)
+++.|.||+.+ +.|+.||.|..+||..|+ ++..+|. +.|+|+.|....
T Consensus 3 ~~~~C~~C~~~-----g~ll~Cd~C~~~~H~~C~~p~l~~~p~-~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNG-----GELLCCEKCPKVFHLSCHVPTLTNFPS-GEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCC-----SSCEECSSSSCEECTTTSSSCCSSCCS-SCCCCTTTSCSS
T ss_pred CCCccccCCCC-----CeeeecCCCCcccCccccCCCCCCCCC-CCEECccccCcc
Confidence 67889999976 469999999999999999 6667787 899999998643
No 93
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.57 E-value=3.7e-05 Score=80.56 Aligned_cols=48 Identities=21% Similarity=0.663 Sum_probs=41.7
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCccc--CCcccCCCCceeeccCCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECY--GVTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CY--gv~~~p~~~~W~C~~C~~~ 643 (1020)
.+++.|.||+.+ +.|+.||+|+.+||..|+ ++..+|. +.|+|+.|...
T Consensus 5 ~~~~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~-~~W~C~~C~~~ 54 (207)
T 3u5n_A 5 PNEDWCAVCQNG-----GDLLCCEKCPKVFHLTCHVPTLLSFPS-GDWICTFCRDI 54 (207)
T ss_dssp SSCSSBTTTCCC-----EEEEECSSSSCEECTTTSSSCCSSCCS-SCCCCTTTSCS
T ss_pred CCCCCCCCCCCC-----CceEEcCCCCCccCCccCCCCCCCCCC-CCEEeCceeCc
Confidence 467889999976 469999999999999999 6667887 89999999864
No 94
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=97.56 E-value=3.2e-05 Score=68.61 Aligned_cols=46 Identities=28% Similarity=0.835 Sum_probs=38.2
Q ss_pred cccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCCc-eeeccCCC
Q 036712 594 RCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFTS-WVCRACEM 642 (1020)
Q Consensus 594 ~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~~-W~C~~C~~ 642 (1020)
.|.||+..+ +.+.||.||.|+.+||..|++ +..+|. +. |+|..|+.
T Consensus 28 ~C~vC~~~~--d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~-g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQ--DPDKQLMCDECDMAFHIYCLDPPLSSVPS-EDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCS--CGGGEEECTTTCCEEETTTSSSCCSSCCS-SSCCCCTTTC-
T ss_pred cCCccCCCC--CCcceeEeCCCCCccCcccCCCcccCCCC-CCceECcCccc
Confidence 577887654 457899999999999999997 778888 56 99999974
No 95
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.56 E-value=3e-05 Score=65.73 Aligned_cols=48 Identities=25% Similarity=0.715 Sum_probs=39.1
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
..+|.+|++ ++.||.||.|++|||..|.++... .++..+++||.|+..
T Consensus 11 ~~~C~vC~~------~g~ll~CD~C~~~fH~~Cl~p~l~---~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 11 QDYCEVCQQ------GGEIILCDTCPRAYHMVCLDPDME---KAPEGKWSCPHCEKE 58 (61)
T ss_dssp CSSCTTTSC------CSSEEECSSSSCEEEHHHHCTTCC---SCCCSSCCCTTGGGG
T ss_pred CCCCccCCC------CCcEEECCCCChhhhhhccCCCCC---CCCCCceECcccccc
Confidence 467888875 468999999999999999987532 466788999999853
No 96
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.54 E-value=7.6e-05 Score=65.22 Aligned_cols=49 Identities=29% Similarity=0.774 Sum_probs=40.8
Q ss_pred cccccccccCccCCCCcEEEcCC--CC-chhcCcccCCcccCCCCceeeccCCCCCc
Q 036712 592 TERCAICRWVEDWDYNKIIICNR--CQ-IAVHQECYGVTDVQDFTSWVCRACEMPNA 645 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~--C~-~~vH~~CYgv~~~p~~~~W~C~~C~~~~~ 645 (1020)
...| +|+... .+.||.||. |. ..||..|+|+..+|. +.|+|+.|.....
T Consensus 16 ~~~C-~C~~~~---~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~-g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 16 PTYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTKPR-GKWFCPRCSQESG 67 (71)
T ss_dssp CCCS-TTCCCS---CSSEECCSCSSCSCCCEETTTTTCSSCCS-SCCCCTTTSSCSS
T ss_pred CCEE-ECCCCC---CCCEeEeeCCCCCCccEecccCCcCcCCC-CCEECCCCCcccc
Confidence 4567 898864 267999999 77 599999999999998 8999999986543
No 97
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=97.44 E-value=4.2e-05 Score=65.80 Aligned_cols=50 Identities=26% Similarity=0.754 Sum_probs=39.6
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...+|.+|+. +++||.||+|+.|||..|.+..- ..++..+++||.|..+.
T Consensus 7 ~~~~C~vC~~------~g~ll~CD~C~~~fH~~Cl~ppl---~~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 7 NEDECAVCRD------GGELICCDGCPRAFHLACLSPPL---REIPSGTWRCSSCLQAT 56 (66)
T ss_dssp CCCSBSSSSC------CSSCEECSSCCCEECTTTSSSCC---SSCCSSCCCCHHHHHTC
T ss_pred CCCCCccCCC------CCCEEEcCCCChhhcccccCCCc---CcCCCCCeECccccCcc
Confidence 3567889974 46899999999999999998532 24567889999998653
No 98
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.44 E-value=5.1e-05 Score=63.14 Aligned_cols=47 Identities=30% Similarity=0.806 Sum_probs=37.4
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRV 460 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~ 460 (1020)
..+|.+|++ .+.||.||.|++|||..|....- ..++..+++||.|..
T Consensus 9 ~~~C~vC~~------~g~ll~Cd~C~~~~H~~Cl~ppl---~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRK------SGQLLMCDTCSRVYHLDCLDPPL---KTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCC------SSCCEECSSSSCEECSSSSSSCC---CSCCCSSCCCHHHHC
T ss_pred CCCCccCCC------CCeEEEcCCCCcceECccCCCCc---CCCCCCceEChhhhC
Confidence 457888875 35899999999999999998542 246677899999974
No 99
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=97.42 E-value=9.4e-05 Score=62.67 Aligned_cols=48 Identities=27% Similarity=0.843 Sum_probs=38.8
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
..+|.+|++ +++||.||.|+++||..|....- ..++..+++||.|+.+
T Consensus 9 ~~~C~vC~~------~g~ll~Cd~C~~~fH~~Cl~ppl---~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 9 MEFCRVCKD------GGELLCCDTCPSSYHIHCLNPPL---PEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCTTTCC------CSSCBCCSSSCCCBCSSSSSSCC---SSCCSSCCCCTTTTTT
T ss_pred CCcCCCCCC------CCCEEEcCCCCHHHcccccCCCc---CcCCCCccCChhhcCc
Confidence 567888863 46899999999999999998543 2466788999999864
No 100
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=97.41 E-value=9.2e-05 Score=63.77 Aligned_cols=48 Identities=21% Similarity=0.481 Sum_probs=37.8
Q ss_pred CccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 406 QYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 406 ~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
-.|.+|+ +++++|.||.|+++||..|.... +..++..+|+|+.|+...
T Consensus 13 ~~C~vC~------~~~~ll~Cd~C~~~~H~~Cl~P~---l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 13 ARCGVCG------DGTDVLRCTHCAAAFHWRCHFPA---GTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CCCTTTS------CCTTCEECSSSCCEECHHHHCTT---TCCCCSSSCCCTTTTTCC
T ss_pred CCcCCCC------CCCeEEECCCCCCceecccCCCc---cCcCCCCCEECccccCCC
Confidence 4577885 35679999999999999997543 335677889999998654
No 101
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=97.40 E-value=6.2e-05 Score=77.91 Aligned_cols=46 Identities=26% Similarity=0.884 Sum_probs=40.5
Q ss_pred cccccccccCccCCCCcEEEcCCCCchhcCccc--CCcccCCCCceeeccCCCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNRCQIAVHQECY--GVTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CY--gv~~~p~~~~W~C~~C~~~ 643 (1020)
++.|.||+.+ +.|+.||.|..+||..|+ ++..+|. +.|+|+.|...
T Consensus 2 ~~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~-g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKP-----GDLVMCNQCEFCFHLDCHLPALQDVPG-EEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCC-----SSCCCCTTTCCBCCSTTSTTCCSSCCC-TTCCTTTTSCS
T ss_pred CCcCccCCCC-----CceeECCCCCchhccccCCCCcccCCC-CCCCCcCccCC
Confidence 5789999976 469999999999999999 6777887 99999999864
No 102
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.33 E-value=5.6e-05 Score=63.74 Aligned_cols=48 Identities=29% Similarity=0.800 Sum_probs=38.7
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
..+|.+|++ ++.||.||+|+.|||..|.+..- ..++...++||.|..+
T Consensus 5 ~~~C~vC~~------~g~ll~Cd~C~~~fH~~Cl~ppl---~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 5 EDFCSVCRK------SGQLLMCDTCSRVYHLDCLDPPL---KTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CSSCTTTCC------CSSCEECSSSSCEECGGGSSSCC---SSCCCSCCCCHHHHHH
T ss_pred CCCCcCCCC------CCcEEEcCCCCcCEECCcCCCCc---CCCCCCceEChhccCh
Confidence 567889975 36899999999999999998532 2456778999999854
No 103
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.32 E-value=3.7e-05 Score=67.21 Aligned_cols=53 Identities=26% Similarity=0.560 Sum_probs=42.4
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...+|.+|++... .++..||.||+|+.|||..|.++.. ++..+++|+.|+.+.
T Consensus 15 ~~~~C~vC~~~~s-~~~~~ll~CD~C~~~~H~~Cl~~~~-----vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 15 EDAVCSICMDGES-QNSNVILFCDMCNLAVHQECYGVPY-----IPEGQWLCRHCLQSR 67 (71)
T ss_dssp SSCSCSSSCCCCC-CSSSCEEECSSSCCEEEHHHHTCSS-----CCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCC-CCCCCEEECCCCCCccccccCCCCc-----CCCCCcCCccCcCcC
Confidence 4567889987432 2467999999999999999998873 567889999998653
No 104
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.27 E-value=0.00028 Score=65.44 Aligned_cols=48 Identities=27% Similarity=0.795 Sum_probs=38.4
Q ss_pred ccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCCC
Q 036712 593 ERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 593 ~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~~ 643 (1020)
..| ||+..+ +++.||.|+.|...||..|+++........|+|+.|...
T Consensus 29 vrC-iC~~~~--~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 29 TRC-ICGFTH--DDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp CCC-TTSCCS--CSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred EEe-ECCCcc--CCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 457 898754 356899999999999999999875444458999999754
No 105
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.25 E-value=0.00011 Score=64.63 Aligned_cols=50 Identities=24% Similarity=0.535 Sum_probs=40.5
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCC-CCceeeccCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQD-FTSWVCRACEM 642 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~-~~~W~C~~C~~ 642 (1020)
+...|.+|+..+ +.+.||.||.|...||..|+++...+. .+.|+|+.|..
T Consensus 17 ~~~~C~~C~~~~--~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~ 67 (75)
T 2k16_A 17 QIWICPGCNKPD--DGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 67 (75)
T ss_dssp EEECBTTTTBCC--SSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHH
T ss_pred CCcCCCCCCCCC--CCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccC
Confidence 346799999875 345799999999999999999876543 27899999974
No 106
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.25 E-value=0.00021 Score=65.28 Aligned_cols=48 Identities=29% Similarity=0.789 Sum_probs=40.2
Q ss_pred ccccccccCccCCCCcEEEcCC--CC-chhcCcccCCcccCCCCceeeccCCCCCc
Q 036712 593 ERCAICRWVEDWDYNKIIICNR--CQ-IAVHQECYGVTDVQDFTSWVCRACEMPNA 645 (1020)
Q Consensus 593 ~~C~VC~~~e~~~~n~Ll~Cd~--C~-~~vH~~CYgv~~~p~~~~W~C~~C~~~~~ 645 (1020)
..| +|+... .+.||.||. |. ..||..|.|+...|. +.|+|+.|.....
T Consensus 37 ~yC-iC~~~~---~g~MI~CD~~dC~~~WfH~~CVgl~~~p~-g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 37 TYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTKPR-GKWFCPRCSQESG 87 (91)
T ss_dssp BCS-TTCCBC---CSCCCCCSCSSCSCCCCCSTTTTCSSCCC-SSCCCTTTCCCCS
T ss_pred cEE-ECCCCC---CCCEeEecCCCCCCCCEecccCCcCcCCC-CCEECcCccCcCC
Confidence 556 999864 257999999 76 689999999999988 8999999986543
No 107
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=97.24 E-value=8.8e-05 Score=63.57 Aligned_cols=55 Identities=20% Similarity=0.480 Sum_probs=41.5
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhccc-CCCceeCCCcCcc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDL-EHIDYYCPNCRVK 461 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l-~~~~Y~Cp~C~~~ 461 (1020)
..+|.+|++.+.. ++..||.||+|+.+||..|.++.-... .+ +...++|+.|..+
T Consensus 6 ~~~C~vC~~~~~~-~~~~ll~Cd~C~~~~H~~C~~p~l~~~-~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 6 SGVCTICQEEYSE-APNEMVICDKCGQGYHQLCHTPHIDSS-VIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCBSSSCCCCCB-TTBCEEECSSSCCEEETTTSSSCCCHH-HHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCC-CCCCEEECCCCChHHHhhhCCCccccc-ccCCCCCEECCCCcCc
Confidence 5688999875432 467999999999999999998743210 12 5678999999864
No 108
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.24 E-value=7e-05 Score=68.68 Aligned_cols=51 Identities=22% Similarity=0.496 Sum_probs=40.1
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
..+|.+|++.. +...||.||.|++|||..|.+..- ..++..+|+||.|..+
T Consensus 16 ~~~C~vC~~~~---~~~~ll~CD~C~~~~H~~Cl~Ppl---~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 16 SYICQVCSRGD---EDDKLLFCDGCDDNYHIFCLLPPL---PEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCSSSCCSG---GGGGCEECTTTCCEECSSSSSSCC---SSCCSSCCCCHHHHHH
T ss_pred CCCCccCCCcC---CCCCEEEcCCCCchhccccCCCCc---ccCCCCCcCCccCcCc
Confidence 34688888643 356899999999999999998442 2567788999999865
No 109
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.22 E-value=0.00024 Score=61.93 Aligned_cols=56 Identities=29% Similarity=0.830 Sum_probs=42.1
Q ss_pred cccchhhHhhhcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCC-ceeCCCcCcc
Q 036712 392 QFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHI-DYYCPNCRVK 461 (1020)
Q Consensus 392 ~~lC~~C~~l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~-~Y~Cp~C~~~ 461 (1020)
...|..| +|.+|++ .++++.||.||+|++|||..|.+.. +..++.. +++||.|+.+
T Consensus 13 ~w~C~~C--------~C~~C~~---~~~~~~ll~CD~C~~~yH~~Cl~Pp---l~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 13 NRLCRVC--------ACHLCGG---RQDPDKQLMCDECDMAFHIYCLDPP---LSSVPSEDEWYCPECRND 69 (70)
T ss_dssp TSCCTTT--------SBTTTCC---CSCGGGEEECTTTCCEEEGGGSSSC---CSSCCSSSCCCCTTTSCC
T ss_pred CeECCCC--------CCcCCCC---cCCCCCEEEcCCCCCceecccCCCC---cCCCCCCCCcCCcCccCc
Confidence 4556655 3777776 3467899999999999999999843 2245556 8999999854
No 110
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.10 E-value=0.00021 Score=75.49 Aligned_cols=48 Identities=27% Similarity=0.778 Sum_probs=37.4
Q ss_pred cccccccccCccCCCCcEEEcCCCCchhcCcccC--CcccCCCC-ceeeccCCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNRCQIAVHQECYG--VTDVQDFT-SWVCRACEM 642 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYg--v~~~p~~~-~W~C~~C~~ 642 (1020)
+..|.+|+..+ +.+.|++||.|+.++|..|++ +..+|. + .|+|+.|..
T Consensus 174 ~c~C~vC~~~~--~~~~lL~CD~C~~~yH~~CL~PPL~~vP~-G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQ--DPDKQLMCDECDMAFHIYCLDPPLSSVPS-EDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCC--C--CCEECSSSCCEECSCC--CCCCSCCS-SSCCCCGGGC-
T ss_pred CCCCcCCCCCC--CCCCeEEcCCCCcceeCccCCCCcccCCC-CCCCCCcCCcC
Confidence 45799998754 357899999999999999997 777887 6 999999974
No 111
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.08 E-value=0.0002 Score=65.28 Aligned_cols=46 Identities=24% Similarity=0.642 Sum_probs=38.9
Q ss_pred cccccccccCccCCCCcEEEcCCCC---chhcCcccCCcccCCCCceeecc-CCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNRCQ---IAVHQECYGVTDVQDFTSWVCRA-CEM 642 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~C~---~~vH~~CYgv~~~p~~~~W~C~~-C~~ 642 (1020)
...| +|+.... +.||.||.|+ ..||..|+|+...|. +.|+|+. |..
T Consensus 26 ~~yC-iC~~~~~---g~MI~CD~c~C~~eWfH~~CVgl~~~p~-~~W~Cp~cC~~ 75 (90)
T 2jmi_A 26 EVYC-FCRNVSY---GPMVACDNPACPFEWFHYGCVGLKQAPK-GKWYCSKDCKE 75 (90)
T ss_dssp SCCS-TTTCCCS---SSEECCCSSSCSCSCEETTTSSCSSCTT-SCCCSSHHHHH
T ss_pred CcEE-EeCCCCC---CCEEEecCCCCccccCcCccCCCCcCCC-CCccCChhhcc
Confidence 3567 9997643 5799999976 899999999999998 8999999 974
No 112
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.04 E-value=0.00016 Score=61.07 Aligned_cols=45 Identities=31% Similarity=0.835 Sum_probs=38.2
Q ss_pred ccccccccCccCCCCcEEEcCC--CC-chhcCcccCCcccCCCCceeeccCCC
Q 036712 593 ERCAICRWVEDWDYNKIIICNR--CQ-IAVHQECYGVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 593 ~~C~VC~~~e~~~~n~Ll~Cd~--C~-~~vH~~CYgv~~~p~~~~W~C~~C~~ 642 (1020)
..| +|+... .+.||.||+ |. ..||..|+|+..+|. +.|+|+.|..
T Consensus 11 ~~C-~C~~~~---~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~-g~w~C~~C~~ 58 (60)
T 2vnf_A 11 TYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTKPR-GKWFCPRCSQ 58 (60)
T ss_dssp EET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCS-SCCCCHHHHC
T ss_pred CEE-ECCCcC---CCCEEEeCCCCCCCceEehhcCCCCcCCC-CCEECcCccC
Confidence 456 998864 368999999 66 789999999999998 8999999964
No 113
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.02 E-value=0.00019 Score=60.42 Aligned_cols=46 Identities=28% Similarity=0.759 Sum_probs=38.8
Q ss_pred cccccccccCccCCCCcEEEcCC--CC-chhcCcccCCcccCCCCceeeccCCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNR--CQ-IAVHQECYGVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~--C~-~~vH~~CYgv~~~p~~~~W~C~~C~~ 642 (1020)
...| +|+... .+.||.||+ |. ..||..|.|+...|. +.|+|+.|..
T Consensus 9 ~~yC-~C~~~~---~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~-~~w~Cp~C~~ 57 (59)
T 3c6w_A 9 PTYC-LCHQVS---YGEMIGCDNPDCPIEWFHFACVDLTTKPK-GKWFCPRCVQ 57 (59)
T ss_dssp CEET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCS-SCCCCHHHHC
T ss_pred CcEE-ECCCCC---CCCeeEeeCCCCCCCCEecccCCcccCCC-CCEECcCccC
Confidence 3456 999864 368999999 77 599999999999998 8999999964
No 114
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=96.96 E-value=0.00038 Score=65.54 Aligned_cols=45 Identities=31% Similarity=0.635 Sum_probs=36.8
Q ss_pred cCccccccccccCCCCCCceecC--CCCcEEcCcccccchhhhcccCCCceeCCCcCc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCD--GCNVWVHAECDEISGKHFKDLEHIDYYCPNCRV 460 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd--~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~ 460 (1020)
..||.+|+ ++++||.|| +|.+|||..|.+|. .++...++||.|.-
T Consensus 15 ~~~C~~C~------~~G~ll~CD~~~Cp~~fH~~Cl~L~-----~~P~g~W~Cp~c~C 61 (107)
T 4gne_A 15 EDYCFQCG------DGGELVMCDKKDCPKAYHLLCLNLT-----QPPYGKWECPWHQC 61 (107)
T ss_dssp CSSCTTTC------CCSEEEECCSTTCCCEECTGGGTCS-----SCCSSCCCCGGGBC
T ss_pred CCCCCcCC------CCCcEeEECCCCCCcccccccCcCC-----cCCCCCEECCCCCC
Confidence 45778886 467899999 89999999999854 36678899998863
No 115
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=96.94 E-value=0.00025 Score=60.28 Aligned_cols=47 Identities=28% Similarity=0.711 Sum_probs=39.0
Q ss_pred cccccccccCccCCCCcEEEcCC--CC-chhcCcccCCcccCCCCceeeccCCCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNR--CQ-IAVHQECYGVTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~--C~-~~vH~~CYgv~~~p~~~~W~C~~C~~~ 643 (1020)
...| +|+... .+.||.||. |. ..||..|.|+...|. +.|+|+.|...
T Consensus 11 ~~yC-~C~~~~---~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~-~~w~Cp~C~~~ 60 (62)
T 2g6q_A 11 PTYC-LCNQVS---YGEMIGCDNEQCPIEWFHFSCVSLTYKPK-GKWYCPKCRGD 60 (62)
T ss_dssp CEET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCS-SCCCCHHHHTC
T ss_pred CcEE-ECCCCC---CCCeeeeeCCCCCcccEecccCCcCcCCC-CCEECcCcccC
Confidence 3456 999863 358999999 55 899999999999987 99999999753
No 116
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=96.94 E-value=8.4e-05 Score=67.64 Aligned_cols=54 Identities=26% Similarity=0.552 Sum_probs=42.7
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
....+|.+|++... .++..||.||+|+.|||..|.++.. ++..+++||.|....
T Consensus 23 ~~~~~C~vC~~~~s-~~~~~ll~CD~C~~~fH~~Cl~p~~-----vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 23 DEDAVCSICMDGES-QNSNVILFCDMCNLAVHQECYGVPY-----IPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCCSSCCSSSS-CSEEEEEECSSSCCCCCHHHHTCSS-----CCSSCCCCHHHHHHT
T ss_pred CCCCcCCcCCCCCC-CCCCCEEECCCCCchhhcccCCCCc-----cCCCceECccccCcc
Confidence 34568899986432 2456899999999999999998863 567789999998653
No 117
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=96.88 E-value=0.00065 Score=69.76 Aligned_cols=51 Identities=25% Similarity=0.718 Sum_probs=40.0
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
..+|.+|+ +++++++||+|.+|||..|....- ..++...|+||.|+.....
T Consensus 4 ~~~C~~C~------~~g~ll~Cd~C~~~~H~~C~~p~l---~~~p~~~W~C~~C~~~~~~ 54 (184)
T 3o36_A 4 EDWCAVCQ------NGGELLCCEKCPKVFHLSCHVPTL---TNFPSGEWICTFCRDLSKP 54 (184)
T ss_dssp CSSCTTTC------CCSSCEECSSSSCEECTTTSSSCC---SSCCSSCCCCTTTSCSSSC
T ss_pred CCccccCC------CCCeeeecCCCCcccCccccCCCC---CCCCCCCEECccccCcccc
Confidence 45789996 357799999999999999975432 2566778999999976543
No 118
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=96.81 E-value=0.00099 Score=59.06 Aligned_cols=56 Identities=30% Similarity=0.858 Sum_probs=42.2
Q ss_pred CcccchhhHhhhcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCc-eeCCCcCc
Q 036712 391 TQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHID-YYCPNCRV 460 (1020)
Q Consensus 391 ~~~lC~~C~~l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~-Y~Cp~C~~ 460 (1020)
....|..|. |.+|++ ..+...||.||.|+++||..|.... +..++..+ ++||.|++
T Consensus 20 ~~W~C~~C~--------C~vC~~---~~d~~~ll~CD~C~~~yH~~Cl~Pp---L~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 20 VNRLCRVCA--------CHLCGG---RQDPDKQLMCDECDMAFHIYCLDPP---LSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSCCTTTS--------BTTTCC---CSCGGGEEECTTTCCEEETTTSSSC---CSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCCc--------CCccCC---CCCCcceeEeCCCCCccCcccCCCc---ccCCCCCCceECcCccc
Confidence 356787772 778875 3456789999999999999998743 22466667 99999984
No 119
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.74 E-value=0.00085 Score=66.13 Aligned_cols=89 Identities=25% Similarity=0.554 Sum_probs=64.2
Q ss_pred CccccCCCCCcCC-CCc-cccccccccCcccchhhHhhhcCc----------CccccccccccCCCCCCceecCCCCcEE
Q 036712 366 VARVCDGCGLFRP-CKL-KRMKGLVSETQFLCKHCSKLQKSE----------QYCGICKNIWHHSDSGNWVCCDGCNVWV 433 (1020)
Q Consensus 366 ~~~~C~~Cg~~~p-~k~-~~~~~~~~~~~~lC~~C~~l~~~g----------~~C~iC~k~y~~~d~~~wv~Cd~C~~Wv 433 (1020)
+-+.|..||.... ... ....|+.- ...+|..|...|.++ .||.+|+ ++++.++||.|.+-|
T Consensus 13 ~~i~Ct~Cg~~~~~~q~~~~~~HPll-~v~~C~~C~~~y~~~~~~~d~Dg~~d~C~vC~------~GG~LlcCD~Cpr~F 85 (142)
T 2lbm_A 13 GIVSCTACGQQVNHFQKDSIYRHPSL-QVLICKNCFKYYMSDDISRDSDGMDEQCRWCA------EGGNLICCDFCHNAF 85 (142)
T ss_dssp CCCBCTTTCSBSTTTCSSSEEEETTT-TEEEEHHHHHHHHHSCCCBCTTSCBCSCSSSC------CCSSEEECSSSCCEE
T ss_pred CCCEecCCCCccccccccchhcCCCc-cccccHHHHHHHhcCCceecCCCCCCeecccC------CCCcEEeCCCCCCee
Confidence 6678999998763 211 22234433 367899999866643 5788885 688999999999999
Q ss_pred cCccccc--chhhhccc--CCCceeCCCcCcc
Q 036712 434 HAECDEI--SGKHFKDL--EHIDYYCPNCRVK 461 (1020)
Q Consensus 434 H~~C~~~--~~~~~~~l--~~~~Y~Cp~C~~~ 461 (1020)
|.+|... ..+.+..+ +..++.|+.|..+
T Consensus 86 h~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 86 CKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp EHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred eHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 9999873 33334333 5678999999854
No 120
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=96.71 E-value=0.00087 Score=70.12 Aligned_cols=51 Identities=27% Similarity=0.739 Sum_probs=39.9
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
..+|.+|+ +++++|.||+|++|+|..|.... +..++...|+||.|+.....
T Consensus 7 ~~~C~~C~------~~g~ll~Cd~C~~~~H~~Cl~p~---l~~~p~~~W~C~~C~~~~~~ 57 (207)
T 3u5n_A 7 EDWCAVCQ------NGGDLLCCEKCPKVFHLTCHVPT---LLSFPSGDWICTFCRDIGKP 57 (207)
T ss_dssp CSSBTTTC------CCEEEEECSSSSCEECTTTSSSC---CSSCCSSCCCCTTTSCSSSC
T ss_pred CCCCCCCC------CCCceEEcCCCCCccCCccCCCC---CCCCCCCCEEeCceeCcccc
Confidence 46788996 34679999999999999998543 22466788999999976543
No 121
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.68 E-value=0.00088 Score=57.97 Aligned_cols=49 Identities=22% Similarity=0.489 Sum_probs=39.6
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~ 642 (1020)
+...| +|+...+ +..||.||.|...+|..|.|+...+..+.|+|+.|..
T Consensus 18 ~~~~C-iC~~~~~--~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFA--GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCT--TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CceEe-ECCCcCC--CCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 34567 9987643 4579999999999999999998755447899999964
No 122
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=96.68 E-value=0.001 Score=70.30 Aligned_cols=49 Identities=27% Similarity=0.777 Sum_probs=34.6
Q ss_pred ccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCC-ceeCCCcCcc
Q 036712 407 YCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHI-DYYCPNCRVK 461 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~-~Y~Cp~C~~~ 461 (1020)
+|.+|++ .++++.|+.||+|+.++|..|.... +..++.. +++||.|...
T Consensus 176 ~C~vC~~---~~~~~~lL~CD~C~~~yH~~CL~PP---L~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 176 ACHLCGG---RQDPDKQLMCDECDMAFHIYCLDPP---LSSVPSEDEWYCPECRND 225 (226)
T ss_dssp SCSSSCC---CCC--CCEECSSSCCEECSCC--CC---CCSCCSSSCCCCGGGC--
T ss_pred CCcCCCC---CCCCCCeEEcCCCCcceeCccCCCC---cccCCCCCCCCCcCCcCc
Confidence 4888876 3457899999999999999998743 2346666 8999999853
No 123
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=96.47 E-value=0.0045 Score=56.16 Aligned_cols=49 Identities=27% Similarity=0.761 Sum_probs=38.8
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
...+|.+|++ ++.++.||.|++.||..|.... +..++..+++||.|...
T Consensus 24 n~~~C~vC~~------~g~LL~CD~C~~~fH~~Cl~Pp---L~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 24 SATICRVCQK------PGDLVMCNQCEFCFHLDCHLPA---LQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSCCSSSCS------SSCCEECTTSSCEECTTSSSTT---CCCCCSSSCCCCSCCCC
T ss_pred CCCcCcCcCC------CCCEEECCCCCCceecccCCCC---CCCCcCCCcCCccccCC
Confidence 3567888874 3579999999999999998433 33567788999999964
No 124
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.28 E-value=0.0022 Score=54.55 Aligned_cols=52 Identities=19% Similarity=0.529 Sum_probs=41.4
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCC--CCceeeccCCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQD--FTSWVCRACEMP 643 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~--~~~W~C~~C~~~ 643 (1020)
+...|.+|+...+ +...||.||.|...||..|.|+...+. ...|+|..|...
T Consensus 5 e~~~C~~C~~~~~-~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 5 SSGQCGACGESYA-ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCC-SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCccC-CCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 4567999987643 346799999999999999999986542 368999999753
No 125
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.19 E-value=0.0036 Score=60.72 Aligned_cols=90 Identities=23% Similarity=0.531 Sum_probs=63.8
Q ss_pred cCccccCCCCCcCCCCc--cccccccccCcccchhhHhhhcCc----------CccccccccccCCCCCCceecCCCCcE
Q 036712 365 KVARVCDGCGLFRPCKL--KRMKGLVSETQFLCKHCSKLQKSE----------QYCGICKNIWHHSDSGNWVCCDGCNVW 432 (1020)
Q Consensus 365 ~~~~~C~~Cg~~~p~k~--~~~~~~~~~~~~lC~~C~~l~~~g----------~~C~iC~k~y~~~d~~~wv~Cd~C~~W 432 (1020)
...+.|.+||....--. ....|+.-. -.+|..|...|.++ .||.+|. ++++.++||.|.+-
T Consensus 6 ~~~~~Ct~Cg~~~~~~~~~~~~~HPll~-v~~C~~C~~~y~~~~~~~d~Dg~~~~C~vC~------dGG~LlcCd~Cpr~ 78 (129)
T 3ql9_A 6 MGIVSCTACGQQVNHFQKDSIYRHPSLQ-VLICKNCFKYYMSDDISRDSDGMDEQCRWCA------EGGNLICCDFCHNA 78 (129)
T ss_dssp CCSCBCTTTCCBCCCCBTTTEEECTTTC-CEEEHHHHHHHHHSCCCBCTTSCBSSCTTTC------CCSEEEECSSSSCE
T ss_pred CCceEeccCCCCCcccCCCccccCCCcC-ceeCHhHHhhhhccccccCCCCCCCcCeecC------CCCeeEecCCCchh
Confidence 45678999998863111 223344322 67899999977533 4688884 68899999999999
Q ss_pred EcCcccccc--hhhhccc--CCCceeCCCcCcc
Q 036712 433 VHAECDEIS--GKHFKDL--EHIDYYCPNCRVK 461 (1020)
Q Consensus 433 vH~~C~~~~--~~~~~~l--~~~~Y~Cp~C~~~ 461 (1020)
||.+|.... ...+..+ +...+.|+.|..+
T Consensus 79 Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 79 FCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp EEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred hhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 999998743 3223333 5678999999854
No 126
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.13 E-value=0.0015 Score=64.40 Aligned_cols=49 Identities=22% Similarity=0.560 Sum_probs=40.0
Q ss_pred CCCcccccccccCccCCCCcEEEcCCCCchhcCcccCCc-------c--cCCCCceeeccCCCC
Q 036712 589 KWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVT-------D--VQDFTSWVCRACEMP 643 (1020)
Q Consensus 589 ~~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~-------~--~p~~~~W~C~~C~~~ 643 (1020)
..+++.|.||.++ +.|+.||.|..+||..|.... . .|+ +.|.|..|...
T Consensus 60 Dg~~d~C~vC~~G-----G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~-~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCAEG-----GNLICCDFCHNAFCKKCILRNLGRKELSTIMDEN-NQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSCCC-----SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTST-TCCCCTTTCCC
T ss_pred CCCCCeecccCCC-----CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCC-CCCEeecccCc
Confidence 4467899999987 579999999999999999532 2 255 89999999753
No 127
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.04 E-value=0.0033 Score=57.11 Aligned_cols=59 Identities=19% Similarity=0.496 Sum_probs=42.6
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhh-cccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHF-KDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~-~~l~~~~Y~Cp~C~~~~~ 463 (1020)
...+|.+|++.... .+..+|.||.|+..||..|....-... ..++...|+|+.|....+
T Consensus 15 ~~~~C~vC~~~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 15 MGLACVVCRQMTVA-SGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCC-TTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCcCCCCCCCCCC-CCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 36789999874221 246899999999999999987543210 125678899999996543
No 128
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=96.00 E-value=0.0042 Score=72.32 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=35.6
Q ss_pred CcccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCC
Q 036712 949 NIARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLF 996 (1020)
Q Consensus 949 NiaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~ 996 (1020)
-++-++||||.||+.+. .++ ..+.++|.|+|++||||+++|+.
T Consensus 221 P~~D~~NH~~~~~~~~~---~~~--~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 221 PAADILNHLANHNANLE---YSA--NCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp TTGGGCEECSSCSEEEE---ECS--SEEEEEESSCBCTTCEEEECCSS
T ss_pred ecHHHhcCCCCCCeEEE---EeC--CeEEEEECCCcCCCchhhccCCC
Confidence 35678999999998654 333 47899999999999999999975
No 129
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=95.86 E-value=0.0048 Score=63.74 Aligned_cols=49 Identities=24% Similarity=0.718 Sum_probs=39.2
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
..+|.+|+ +++.++.||+|++.||..|.... +..++..+++||.|+...
T Consensus 2 ~~~C~~C~------~~g~ll~Cd~C~~~~H~~Cl~p~---l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQ------KPGDLVMCNQCEFCFHLDCHLPA---LQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTC------CCSSCCCCTTTCCBCCSTTSTTC---CSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCC------CCCceeECCCCCchhccccCCCC---cccCCCCCCCCcCccCCC
Confidence 56899997 35679999999999999998532 224667889999999763
No 130
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=95.82 E-value=0.0053 Score=62.45 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=34.3
Q ss_pred cccccccCCCCCCceecCCCCcEEcCcccccchhhhcc-cCCCceeCCCcCc
Q 036712 410 ICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKD-LEHIDYYCPNCRV 460 (1020)
Q Consensus 410 iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~-l~~~~Y~Cp~C~~ 460 (1020)
.|++-. +.+..|+||+.|.+|||..|.+.....+.. .-...|+|..|+.
T Consensus 9 YCG~~~--~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 9 DEENGR--QLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHH 58 (177)
T ss_dssp --CTTC--CTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTST
T ss_pred EcCCCC--CCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCC
Confidence 566522 237889999999999999999854432221 2367799999984
No 131
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=95.81 E-value=0.0036 Score=55.52 Aligned_cols=50 Identities=26% Similarity=0.634 Sum_probs=40.1
Q ss_pred cccccccccCccCCCCcEEEcC--CCCchhcCcccCCcccCC------CCceeeccCCCCC
Q 036712 592 TERCAICRWVEDWDYNKIIICN--RCQIAVHQECYGVTDVQD------FTSWVCRACEMPN 644 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd--~C~~~vH~~CYgv~~~p~------~~~W~C~~C~~~~ 644 (1020)
...| +|+..+ +++.||.|| .|...+|..|+|+...+. ...|+|..|....
T Consensus 16 ~~~C-iC~~~~--~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 16 KVRC-VCGNSL--ETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCC-SSCCCC--CCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CEEe-ECCCcC--CCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 3567 899873 456899999 999999999999987653 3689999997543
No 132
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.81 E-value=0.0013 Score=57.91 Aligned_cols=49 Identities=27% Similarity=0.764 Sum_probs=38.9
Q ss_pred cccccccccCccCCCCcEEEcCCCCchhcCcccCCcccC------CCCceeeccCCCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQ------DFTSWVCRACEMP 643 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p------~~~~W~C~~C~~~ 643 (1020)
...| +|+.... ...||.||.|...||..|.|+...+ ....|+|..|...
T Consensus 16 ~~~C-~C~~~~~--~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 16 ALYC-ICRQPHN--NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCCCC--SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCEE-ECCCccC--CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 3556 8988653 4589999999999999999998654 2368999999753
No 133
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.80 E-value=0.0026 Score=55.34 Aligned_cols=46 Identities=28% Similarity=0.752 Sum_probs=38.0
Q ss_pred ccccccccCccCCCCcEEEcCCCC---chhcCcccCCcccCCCCceeeccCCCC
Q 036712 593 ERCAICRWVEDWDYNKIIICNRCQ---IAVHQECYGVTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 593 ~~C~VC~~~e~~~~n~Ll~Cd~C~---~~vH~~CYgv~~~p~~~~W~C~~C~~~ 643 (1020)
..| +|+..+ ++.||.||.|+ ..||..|.|+...|. +.|+|+.|...
T Consensus 7 ~yC-~C~~~~---~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~-~~w~Cp~C~~~ 55 (70)
T 1x4i_A 7 GYC-ICNQVS---YGEMVGCDNQDCPIEWFHYGCVGLTEAPK-GKWYCPQCTAA 55 (70)
T ss_dssp CCS-TTSCCC---CSSEECCSCTTCSCCCEEHHHHTCSSCCS-SCCCCHHHHHH
T ss_pred eEE-EcCCCC---CCCEeEeCCCCCCccCCcccccccCcCCC-CCEECCCCCcc
Confidence 445 688763 35899999985 899999999999887 89999999753
No 134
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=95.73 E-value=0.0043 Score=50.67 Aligned_cols=45 Identities=22% Similarity=0.484 Sum_probs=37.0
Q ss_pred cccccCccCCCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCC
Q 036712 596 AICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 596 ~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~ 642 (1020)
.+|+... ++..||.||.|..-+|..|.|+...+....|+|+.|..
T Consensus 7 C~C~~~~--~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 7 CFCMKPF--AGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp STTCCBC--TTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EEeCCcC--CCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 4787654 35689999999999999999998765557899999963
No 135
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=95.66 E-value=0.0022 Score=62.15 Aligned_cols=48 Identities=23% Similarity=0.623 Sum_probs=39.5
Q ss_pred CCCcccccccccCccCCCCcEEEcCCCCchhcCcccCC-------ccc--CCCCceeeccCCC
Q 036712 589 KWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGV-------TDV--QDFTSWVCRACEM 642 (1020)
Q Consensus 589 ~~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv-------~~~--p~~~~W~C~~C~~ 642 (1020)
+.+++.|.||+++ ++|+.||.|..+||..|... ..+ +. +.|.|..|..
T Consensus 54 Dg~~~~C~vC~dG-----G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~-~~W~C~~C~~ 110 (129)
T 3ql9_A 54 DGMDEQCRWCAEG-----GNLICCDFCHNAFCKKCILRNLGRRELSTIMDEN-NQWYCYICHP 110 (129)
T ss_dssp TSCBSSCTTTCCC-----SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTT-SCCCCTTTCC
T ss_pred CCCCCcCeecCCC-----CeeEecCCCchhhhHHHhCCCcchhHHHHhccCC-CCeEcCCcCC
Confidence 4467889999987 68999999999999999953 233 44 8999999965
No 136
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.60 E-value=0.0051 Score=54.58 Aligned_cols=50 Identities=26% Similarity=0.556 Sum_probs=39.7
Q ss_pred ccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCC--CCceeeccCCCCC
Q 036712 593 ERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQD--FTSWVCRACEMPN 644 (1020)
Q Consensus 593 ~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~--~~~W~C~~C~~~~ 644 (1020)
..| +|+...+ +...||.||.|...||..|.|+...+. ...|+|..|....
T Consensus 13 ~~C-~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 13 VYC-LCRQPYN-VNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCS-TTSCSCC-SSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred cEE-EcCCccC-CCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 456 9988643 346899999999999999999986542 3689999998653
No 137
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.26 E-value=0.0062 Score=49.76 Aligned_cols=47 Identities=23% Similarity=0.538 Sum_probs=36.0
Q ss_pred cccccccCccCCCCcEEEcC-CCCchhcCcccCCcccC-CCCceeeccCC
Q 036712 594 RCAICRWVEDWDYNKIIICN-RCQIAVHQECYGVTDVQ-DFTSWVCRACE 641 (1020)
Q Consensus 594 ~C~VC~~~e~~~~n~Ll~Cd-~C~~~vH~~CYgv~~~p-~~~~W~C~~C~ 641 (1020)
.|.+|+...+ ++..+|.|| .|..-||..|.|+...+ ....|+|+.|+
T Consensus 4 ~cc~C~~p~~-~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCK-DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCC-TTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccC-CCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 3677877542 345799999 89999999999998654 12789999984
No 138
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=95.16 E-value=0.008 Score=69.58 Aligned_cols=49 Identities=24% Similarity=0.292 Sum_probs=35.2
Q ss_pred CcccccCCCCCCCeeEEEEEECC------CeeEEEEEEccCCCCCCeEEEecCCC
Q 036712 949 NIARLINHSCMPNCYARIMSVGD------CESRIVLIAKTNVSAGDELTYDYLFD 997 (1020)
Q Consensus 949 NiaRfINHSC~PN~~~~~v~v~~------~~~ri~l~A~RdI~~GEELT~DY~~~ 997 (1020)
-++-++||++.||.....+.+.+ ....+.++|.|+|++||||+++|+..
T Consensus 188 P~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~ 242 (440)
T 2h21_A 188 PMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN 242 (440)
T ss_dssp SSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred echHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence 35678899999975322233221 24579999999999999999999854
No 139
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=95.15 E-value=0.012 Score=51.15 Aligned_cols=48 Identities=23% Similarity=0.651 Sum_probs=37.1
Q ss_pred ccccccccCccCCCCcEEEcCCCCchhcCcccCCcccC-CCCceeeccCCC
Q 036712 593 ERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQ-DFTSWVCRACEM 642 (1020)
Q Consensus 593 ~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p-~~~~W~C~~C~~ 642 (1020)
..| +|+...+ +...||.||.|...+|..|+|+...+ ....|+|+.|..
T Consensus 17 ~~C-~C~~~~~-~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~ 65 (72)
T 1wee_A 17 VDC-KCGTKDD-DGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIE 65 (72)
T ss_dssp ECC-TTCCCSC-CSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHH
T ss_pred eEe-eCCCccC-CCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccC
Confidence 568 7987632 22369999999999999999998532 236899999964
No 140
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=95.13 E-value=0.0042 Score=53.23 Aligned_cols=49 Identities=31% Similarity=0.737 Sum_probs=39.1
Q ss_pred CcccccccccCccCCCCcEEEcC-CCCchhcCcccCCccc--------CCCCceeeccCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICN-RCQIAVHQECYGVTDV--------QDFTSWVCRACE 641 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd-~C~~~vH~~CYgv~~~--------p~~~~W~C~~C~ 641 (1020)
....|.+|..... ++..+|.|| .|..-||..|.|+... |. +.|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~-~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~-~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVN-DDQDAILCEASCQKWFHRICTGMTETAYGLLTAEAS-AVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCC-TTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTT-EEECCHHHH
T ss_pred CcCcCccCCCccC-CCCCeEecccCccccCchhccCCCHHHHHHhhccCC-CcEECcCcc
Confidence 3467999998643 345799999 9999999999999873 44 689999985
No 141
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=95.02 E-value=0.0082 Score=57.09 Aligned_cols=61 Identities=33% Similarity=0.483 Sum_probs=39.0
Q ss_pred CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccch
Q 036712 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFA 291 (1020)
Q Consensus 219 ~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~ 291 (1020)
|..|..|=|||.|+ ..||+|||.| +.|.+.. -...|+|.--..+ +.+.=.=|.=.+|+||.
T Consensus 2 p~~~e~GmlVW~K~-q~yPfWPAVV--------KSV~r~e--kkA~VL~Ie~~m~-~ekrGi~V~LrrLK~fD 62 (134)
T 3pmi_A 2 PRSFEVGMLVWHKH-KKYPFWPAVV--------KSVRQRD--KKASVLYIEGHMN-PKMKGFTVSLKSLKHFD 62 (134)
T ss_dssp --CCCTTCEEEECC-TTSCCEEEEE--------EEEEGGG--TEEEEEECCSSCC-TTSCCEEEEGGGCEETT
T ss_pred CcccccceEEEEEe-ccCCCcchhe--------eeeeecc--ceEEEEEEeCCCC-cccCceEeEcccCCCCC
Confidence 66789999999999 5899999998 4443332 2577888752222 22222334556677775
No 142
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=94.78 E-value=0.0093 Score=55.88 Aligned_cols=50 Identities=32% Similarity=0.751 Sum_probs=40.2
Q ss_pred cccccccccCccCCCCcEEEcC-CCCchhcCcccCCcc--------cCCCCceeeccCCCC
Q 036712 592 TERCAICRWVEDWDYNKIIICN-RCQIAVHQECYGVTD--------VQDFTSWVCRACEMP 643 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd-~C~~~vH~~CYgv~~--------~p~~~~W~C~~C~~~ 643 (1020)
...|.+|+.... +++.++.|+ .|...||..|.|+.. .++ ..|+|+.|...
T Consensus 3 ~~~C~iC~~p~~-~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~-~~~~Cp~C~~~ 61 (105)
T 2xb1_A 3 VYPCGACRSEVN-DDQDAILCEASCQKWFHRECTGMTESAYGLLTTEAS-AVWACDLCLKT 61 (105)
T ss_dssp CCBCTTTCSBCC-TTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTT-EEECCHHHHHT
T ss_pred cCCCCCCCCccC-CCCCEEEecCCcccccccccCCcCHHHHHhhccCCC-CCEECccccCc
Confidence 346999998643 345799998 999999999999986 345 78999999754
No 143
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=94.72 E-value=0.015 Score=50.08 Aligned_cols=47 Identities=30% Similarity=0.686 Sum_probs=36.2
Q ss_pred ccccccccCccCCCCcEEEcC--CCCchhcCcccCCcccCCC-----CceeeccCCC
Q 036712 593 ERCAICRWVEDWDYNKIIICN--RCQIAVHQECYGVTDVQDF-----TSWVCRACEM 642 (1020)
Q Consensus 593 ~~C~VC~~~e~~~~n~Ll~Cd--~C~~~vH~~CYgv~~~p~~-----~~W~C~~C~~ 642 (1020)
..| +|+... +++.||.|+ .|...+|..|+|+...+.. ..|+|+.|+.
T Consensus 11 v~C-~C~~~~--~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 11 VRC-ICSSTM--VNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp ECC-TTCCCS--CCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred EEe-ECCCCc--CCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 445 897653 346899999 5999999999999765432 3699999964
No 144
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=94.49 E-value=0.006 Score=61.82 Aligned_cols=50 Identities=34% Similarity=0.704 Sum_probs=39.8
Q ss_pred CcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccC--CCCceeeccCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQ--DFTSWVCRACEM 642 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p--~~~~W~C~~C~~ 642 (1020)
....| +|+...+ +.+.++.||.|...+|..|.|+...+ ..+.|+|+.|..
T Consensus 7 ~~~~C-~C~~~~~-~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 7 TKLYC-ICKTPED-ESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp CCEET-TTTEECC-TTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCcEe-eCCCCCC-CCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 45678 9998643 34679999999999999999987543 247899999974
No 145
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=94.08 E-value=0.027 Score=66.38 Aligned_cols=43 Identities=16% Similarity=0.122 Sum_probs=33.3
Q ss_pred cccccCCCCCCCeeEEEEEECCCeeEEEEEEccCCCCCCeEEEecCC
Q 036712 950 IARLINHSCMPNCYARIMSVGDCESRIVLIAKTNVSAGDELTYDYLF 996 (1020)
Q Consensus 950 iaRfINHSC~PN~~~~~v~v~~~~~ri~l~A~RdI~~GEELT~DY~~ 996 (1020)
++-++||||.||.. .+... ...+.++|.|+|++||||+++|+.
T Consensus 272 ~~Dm~NH~~~~~~~--~~~~~--~~~~~~~a~~~i~~Geei~isYG~ 314 (497)
T 3smt_A 272 LWDMCNHTNGLITT--GYNLE--DDRCECVALQDFRAGEQIYIFYGT 314 (497)
T ss_dssp TGGGCEECSCSEEE--EEETT--TTEEEEEESSCBCTTCEEEECCCS
T ss_pred hHHhhcCCCcccce--eeecc--CCeEEEEeCCccCCCCEEEEeCCC
Confidence 46789999999632 22222 347889999999999999999975
No 146
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=93.90 E-value=0.014 Score=51.19 Aligned_cols=50 Identities=26% Similarity=0.561 Sum_probs=38.6
Q ss_pred cccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCC--CCceeeccCCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQD--FTSWVCRACEM 642 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~--~~~W~C~~C~~ 642 (1020)
...-.+|+...+ ++..||.|+.|..-+|..|.|+...+. ...|+|..|..
T Consensus 9 ~~~yCiC~~~~~-~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 9 VPVYCVCRLPYD-VTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 60 (75)
T ss_dssp CCEETTTTEECC-TTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHH
T ss_pred CeeEEECCCcCC-CCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcc
Confidence 334558986532 346899999999999999999987653 25799999974
No 147
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=93.21 E-value=0.025 Score=58.09 Aligned_cols=52 Identities=25% Similarity=0.622 Sum_probs=39.1
Q ss_pred ccccccccCccCC--CCcEEEcCCCCchhcCcccCCccc--------CCCCceeeccCCCCC
Q 036712 593 ERCAICRWVEDWD--YNKIIICNRCQIAVHQECYGVTDV--------QDFTSWVCRACEMPN 644 (1020)
Q Consensus 593 ~~C~VC~~~e~~~--~n~Ll~Cd~C~~~vH~~CYgv~~~--------p~~~~W~C~~C~~~~ 644 (1020)
..|.||+..-..+ ...||.||.|...||..|.|+... |+...|+|+.|....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 5699998754332 235999999999999999999752 222479999998643
No 148
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=91.77 E-value=0.16 Score=40.74 Aligned_cols=50 Identities=22% Similarity=0.414 Sum_probs=35.0
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...-|+||...+...+ ..+.-..|.+.||..|.. .+-.....||.||...
T Consensus 4 ~~~~C~IC~~~~~~~~--~~~~~~~C~H~f~~~Ci~-------~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 4 DGVECAVCLAELEDGE--EARFLPRCGHGFHAECVD-------MWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CSCCCTTTCCCCCTTS--CCEECSSSCCEECTTHHH-------HTTTTCCSCSSSCCCS
T ss_pred CCCcCccCCccccCCC--ceEECCCCCCcccHHHHH-------HHHHcCCcCcCCCCEe
Confidence 4567999988775543 455556799999999953 2222357899999653
No 149
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=91.53 E-value=0.085 Score=47.03 Aligned_cols=56 Identities=23% Similarity=0.564 Sum_probs=40.8
Q ss_pred CCCCCCCcccccccccCccCCCCcEEEcCCCCchhcCccc---CCcccC----------CCCceeeccCCCC
Q 036712 585 PVSVKWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECY---GVTDVQ----------DFTSWVCRACEMP 643 (1020)
Q Consensus 585 p~~~~~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CY---gv~~~p----------~~~~W~C~~C~~~ 643 (1020)
+.....+|+.|.||.... .+.++-|.-|++.||..|. |....+ ....|.|..|...
T Consensus 8 ~~e~~~~D~~C~VC~~~t---~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 8 PREPVVNDEMCDVCEVWT---AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp SCCCCCCSCCCTTTCCCC---SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred cccCCCCCcccCcccccc---ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 344445899999998654 4689999999999999997 222111 1257999999753
No 150
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=90.19 E-value=0.16 Score=45.67 Aligned_cols=57 Identities=21% Similarity=0.240 Sum_probs=39.8
Q ss_pred CCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 218 KPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
++..|.+||.|.||.| .-.|.||+|..-. + .+.|-|.|++ .. + -=|+...|.|+...
T Consensus 18 ~~~~f~vGd~VlArW~-D~~yYPAkI~sV~----~-------~~~YtV~F~D-G~---~---etvk~~~IKp~~~~ 74 (85)
T 3qii_A 18 GSSEFQINEQVLACWS-DCRFYPAKVTAVN----K-------DGTYTVKFYD-GV---V---QTVKHIHVKAFSKD 74 (85)
T ss_dssp ---CCCTTCEEEEECT-TSCEEEEEEEEEC----T-------TSEEEEEETT-SC---E---EEEEGGGEEECC--
T ss_pred CCcccccCCEEEEEeC-CCCEeeEEEEEEC----C-------CCeEEEEEeC-CC---e---EEecHHHcccCChh
Confidence 4789999999999996 7899999995433 1 1469999996 22 1 33677778888654
No 151
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=87.65 E-value=0.23 Score=39.77 Aligned_cols=49 Identities=27% Similarity=0.376 Sum_probs=34.2
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...|+||...|.+. ...+.--.|.+.||..|...-- .....||.|+...
T Consensus 5 ~~~C~IC~~~~~~~--~~~~~~~~CgH~fc~~Ci~~~~-------~~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIHTS--RVVAHVLPCGHLLHRTCYEEML-------KEGYRCPLCSGPS 53 (55)
T ss_dssp CCSCTTTCCCCCTT--TSCEEECTTSCEEETTHHHHHH-------HHTCCCTTSCCSS
T ss_pred CCcCcccChhhcCC--CcCeEecCCCCcccHHHHHHHH-------HcCCcCCCCCCcC
Confidence 46799998877543 3456667899999999963221 1127899999653
No 152
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=87.46 E-value=0.45 Score=44.17 Aligned_cols=56 Identities=18% Similarity=0.287 Sum_probs=35.6
Q ss_pred cCccccccccccCCC------------CCCceecCCCCcEEcCcccccchhhhccc-CCCceeCCCcCcccc
Q 036712 405 EQYCGICKNIWHHSD------------SGNWVCCDGCNVWVHAECDEISGKHFKDL-EHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d------------~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l-~~~~Y~Cp~C~~~~~ 463 (1020)
..-|+||...|...+ ....+.--.|.|.||..|...- +..- ......||.||....
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~w---l~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAM---YCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHH---HHHTCCSSCCBCTTTCCBSS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHH---HHcccCCCCCcCCCCCCccC
Confidence 357999988775532 1123446789999999996421 1110 134689999997654
No 153
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=87.06 E-value=0.29 Score=57.49 Aligned_cols=36 Identities=25% Similarity=0.585 Sum_probs=30.8
Q ss_pred CcEEEcCCCCchhcCcccCCcccCC--CCceeeccCCC
Q 036712 607 NKIIICNRCQIAVHQECYGVTDVQD--FTSWVCRACEM 642 (1020)
Q Consensus 607 n~Ll~Cd~C~~~vH~~CYgv~~~p~--~~~W~C~~C~~ 642 (1020)
..+|.||.|..-||..|.|+..... .+.|+|+.|..
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 4799999999999999999987543 26799999975
No 154
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.73 E-value=0.32 Score=42.77 Aligned_cols=62 Identities=21% Similarity=0.332 Sum_probs=41.2
Q ss_pred CcccchhhHhhhcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 391 TQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 391 ~~~lC~~C~~l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
+...|.-|...+ ...|+||..-|..++ ..+.-..|.|-||..|.. .+-...-.||.||....
T Consensus 14 ~~~~C~IC~~~~--~~~C~iC~~~~~~~~--~~~~~~~C~H~FH~~Ci~-------~Wl~~~~~CP~CR~~~~ 75 (81)
T 2ecl_A 14 ECDTCAICRVQV--MDACLRCQAENKQED--CVVVWGECNHSFHNCCMS-------LWVKQNNRCPLCQQDWV 75 (81)
T ss_dssp CCSCBTTTTBCT--TSCCTTHHHHTCTTT--CCEEEETTSCEEEHHHHH-------HHTTTCCBCTTTCCBCC
T ss_pred CCCCCcccChhh--hccCcccccccCCCc--eEEEeCCCCCccChHHHH-------HHHHhCCCCCCcCCCcc
Confidence 456688887766 456888887665433 334444799999999953 22122359999997643
No 155
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=86.64 E-value=0.27 Score=42.48 Aligned_cols=51 Identities=25% Similarity=0.348 Sum_probs=33.5
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
....|+||...|...+ -+.--.|.|.||..|...-- .....||.||.....
T Consensus 14 ~~~~C~IC~~~~~~~~---~~~~~~C~H~fc~~Ci~~~~-------~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 14 SGLECPVCKEDYALGE---SVRQLPCNHLFHDSCIVPWL-------EQHDSCPVCRKSLTG 64 (78)
T ss_dssp SSCCCTTTTSCCCTTS---CEEECTTSCEEETTTTHHHH-------TTTCSCTTTCCCCCC
T ss_pred CCCCCeeCCccccCCC---CEEEeCCCCeecHHHHHHHH-------HcCCcCcCcCCccCC
Confidence 4567899988775443 22222599999999963211 233689999976543
No 156
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=84.99 E-value=0.35 Score=40.74 Aligned_cols=52 Identities=29% Similarity=0.458 Sum_probs=34.2
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccCC
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKFQ 465 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~~ 465 (1020)
....|+||...|...+ -+..-.|.|.||..|...-- .....||.|+......
T Consensus 13 ~~~~C~IC~~~~~~~~---~~~~~~C~H~fc~~Ci~~~~-------~~~~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 13 TEEKCTICLSILEEGE---DVRRLPCMHLFHQVCVDQWL-------ITNKKCPICRVDIEAQ 64 (69)
T ss_dssp CCCSBTTTTBCCCSSS---CEEECTTSCEEEHHHHHHHH-------HHCSBCTTTCSBSCSC
T ss_pred CCCCCeeCCccccCCC---cEEEeCCCCHHHHHHHHHHH-------HcCCCCcCcCccccCc
Confidence 3557899987774432 24445699999999964221 1134699999876543
No 157
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=84.90 E-value=0.19 Score=45.24 Aligned_cols=50 Identities=28% Similarity=0.518 Sum_probs=33.1
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...|...+ ..+. -.|.|.||..|... +-.....||.||....
T Consensus 39 ~~~~C~IC~~~~~~~~--~~~~-l~C~H~Fh~~Ci~~-------wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGD--VATE-LPCHHYFHKPCVSI-------WLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SCSEETTTTEECCTTC--EEEE-ETTTEEEEHHHHHH-------HHTTTCBCTTTCCBSS
T ss_pred CCCCCcccChhhcCCC--cEEe-cCCCChHHHHHHHH-------HHHcCCcCcCcCccCC
Confidence 3456999988775543 2332 34999999999532 2123469999997644
No 158
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.46 E-value=0.38 Score=41.27 Aligned_cols=50 Identities=22% Similarity=0.421 Sum_probs=34.1
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...|... ..+..-.|.|.||..|...-- .....||.||....
T Consensus 22 ~~~~C~IC~~~~~~~---~~~~~l~C~H~fh~~Ci~~w~-------~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESR---QLLRVLPCNHEFHAKCVDKWL-------KANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBT---CEEEEETTTEEEETTHHHHHH-------HHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCC---CeEEEECCCCHhHHHHHHHHH-------HcCCcCcCcCCcCC
Confidence 456799999877553 344555699999999964221 12368999996543
No 159
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.91 E-value=0.33 Score=42.63 Aligned_cols=55 Identities=16% Similarity=0.221 Sum_probs=35.8
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
.....|+||...|.+.+.. .+.- .|.|.||..|...--. .......||.|+....
T Consensus 13 ~~~~~C~IC~~~~~~~~~~-~~~~-~CgH~fC~~Ci~~~~~----~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLR-PKLL-HCGHTICRQCLEKLLA----SSINGVRCPFCSKITR 67 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSC-EEEC-SSSCEEEHHHHHHHHH----HCSSCBCCTTTCCCBC
T ss_pred cCCCCCccCCccccccCCC-eEEC-CCCChhhHHHHHHHHH----cCCCCcCCCCCCCccc
Confidence 3456789999888665422 2332 7999999999642211 1123589999997644
No 160
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.66 E-value=0.25 Score=41.34 Aligned_cols=53 Identities=25% Similarity=0.464 Sum_probs=36.5
Q ss_pred cCcCccccccccccCCC-CCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 403 KSEQYCGICKNIWHHSD-SGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d-~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
.....|+||...|.+.. ....+.-..|.|.||..|...-- + ....||.|+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~---~----~~~~CP~Cr~~~ 66 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL---K----NANTCPTCRKKI 66 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHH---H----HCSSCTTTCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHH---H----cCCCCCCCCCcc
Confidence 34567899988876543 34555667899999999963221 1 246899999654
No 161
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.38 E-value=0.32 Score=41.54 Aligned_cols=50 Identities=20% Similarity=0.469 Sum_probs=32.9
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...|...+ ..+.. .|.|.||..|...-- .....||.||....
T Consensus 14 ~~~~C~IC~~~~~~~~--~~~~~-~C~H~f~~~Ci~~~~-------~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRD--ELGIC-PCKHAFHRKCLIKWL-------EVRKVCPLCNMPVL 63 (74)
T ss_dssp CSCBCSSSCCBCCSSS--CEEEE-TTTEEEEHHHHHHHH-------HHCSBCTTTCCBCS
T ss_pred CCCCCcCCCcccCCCC--cEEEc-CCCCEecHHHHHHHH-------HcCCcCCCcCcccc
Confidence 4567999988775543 22222 599999999963211 11248999997654
No 162
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=80.49 E-value=0.33 Score=57.04 Aligned_cols=48 Identities=25% Similarity=0.555 Sum_probs=38.1
Q ss_pred cccccccCccCCCCcEEEcCCCCchhcCcccCCcccCC--CCceeeccCCC
Q 036712 594 RCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQD--FTSWVCRACEM 642 (1020)
Q Consensus 594 ~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~--~~~W~C~~C~~ 642 (1020)
.-++|+...+ ++..||.||.|..-+|..|.|+...+. .+.|+|..|..
T Consensus 38 ~yC~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 38 VYCVCRQPYD-VNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp EETTTTEECC-TTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred eEEeCCCcCC-CCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 3349987542 246899999999999999999987653 25799999975
No 163
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.56 E-value=0.58 Score=41.41 Aligned_cols=53 Identities=23% Similarity=0.465 Sum_probs=33.1
Q ss_pred cCccccccccccCCCCCCcee---cCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 405 EQYCGICKNIWHHSDSGNWVC---CDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~---Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
...|.||..-|.++ ..+|. |.+..++||..|...=-. ......||.|+.....
T Consensus 15 ~~~C~IC~~~~~~~--~~l~~pC~C~Gs~h~fH~~Cl~~Wl~-----~~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 15 QDICRICHCEGDDE--SPLITPCHCTGSLHFVHQACLQQWIK-----SSDTRCCELCKYEFIM 70 (80)
T ss_dssp SCCCSSSCCCCCSS--SCEECSSSCCSSSCCEETTHHHHHHH-----HHCCSBCSSSCCBCCC
T ss_pred CCCCeEcCccccCC--CeeEeccccCCcCCeeCHHHHHHHHh-----hCCCCCCCCCCCeeec
Confidence 45789998766543 34552 333349999999632110 1123799999987654
No 164
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=79.13 E-value=0.39 Score=42.83 Aligned_cols=34 Identities=35% Similarity=0.745 Sum_probs=30.0
Q ss_pred cccccccC-CCceeeecCCccccccccccccCCeE
Q 036712 697 KSCIICKQ-THGSCTQCCKCATYFHAMCASRAGYC 730 (1020)
Q Consensus 697 ~~C~iC~~-~~Ga~IqC~~C~~~FHv~CAr~aGl~ 730 (1020)
..|.||.+ ..+..+.|.-|.+.||..|.++.|+.
T Consensus 16 ~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~ 50 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYI 50 (89)
T ss_dssp CCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSC
T ss_pred cccCccccccccceeccccccccccHhhccccccc
Confidence 57999996 46788899999999999999999984
No 165
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=78.59 E-value=0.25 Score=57.25 Aligned_cols=48 Identities=29% Similarity=0.604 Sum_probs=38.3
Q ss_pred cccccccCccCCCCcEEEcCCCCchhcCcccCCcccCC--CCceeeccCCC
Q 036712 594 RCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQD--FTSWVCRACEM 642 (1020)
Q Consensus 594 ~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~--~~~W~C~~C~~ 642 (1020)
..++|+...+ +++.||.||.|..-+|..|.|+...+. .+.|+|+.|..
T Consensus 6 ~yCiC~~~~d-~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~ 55 (447)
T 3kv4_A 6 VYCLCRLPYD-VTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEV 55 (447)
T ss_dssp EETTTTEECC-TTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHH
T ss_pred eEEeCCCcCC-CCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcc
Confidence 4568987542 357899999999999999999987642 25799999975
No 166
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=78.52 E-value=0.25 Score=40.62 Aligned_cols=52 Identities=25% Similarity=0.463 Sum_probs=36.3
Q ss_pred cCccccccccccCCC-CCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 405 EQYCGICKNIWHHSD-SGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d-~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
...|+||...+.+.. ....+.-..|.|.||.+|...--. ....||.|+....
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-------~~~~CP~Cr~~~~ 55 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-------NANTCPTCRKKIN 55 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHH-------HCSBCTTTCCBCT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHH-------cCCCCCCCCccCC
Confidence 457999998876542 345566679999999999642211 2469999997643
No 167
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.11 E-value=1.5 Score=38.41 Aligned_cols=51 Identities=20% Similarity=0.598 Sum_probs=35.1
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccC-CCceeCCCcCccccCCC
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLE-HIDYYCPNCRVKFKFQS 466 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~-~~~Y~Cp~C~~~~~~~~ 466 (1020)
-..|.||..++.. -+.|..|++=||..|... =+. ...=.||.|+.......
T Consensus 15 i~~C~IC~~~i~~-----g~~C~~C~h~fH~~Ci~k------Wl~~~~~~~CP~Cr~~w~~~~ 66 (74)
T 2ct0_A 15 VKICNICHSLLIQ-----GQSCETCGIRMHLPCVAK------YFQSNAEPRCPHCNDYWPHEI 66 (74)
T ss_dssp SCBCSSSCCBCSS-----SEECSSSCCEECHHHHHH------HSTTCSSCCCTTTCSCCCSCC
T ss_pred CCcCcchhhHccc-----CCccCCCCchhhHHHHHH------HHHhcCCCCCCCCcCcCCCCC
Confidence 3567888887753 368889999999999531 111 11258999997665544
No 168
>2jwo_A RAG-2, V(D)J recombination-activating protein 2; phosphoinositide signaling, PHD domain, DNA recombination, DNA-binding, endonuclease, hydrolase; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 2v83_A* 2v85_A* 2v86_A* 2v87_A* 2v88_A* 2v89_A*
Probab=77.83 E-value=1 Score=39.25 Aligned_cols=35 Identities=31% Similarity=0.828 Sum_probs=26.1
Q ss_pred ceecC-CCCcEEcCcccccchhhhccc--CCCceeCCC
Q 036712 423 WVCCD-GCNVWVHAECDEISGKHFKDL--EHIDYYCPN 457 (1020)
Q Consensus 423 wv~Cd-~C~~WvH~~C~~~~~~~~~~l--~~~~Y~Cp~ 457 (1020)
||.|. +=.+|||+.|+.+++.++-.| ++..|+|..
T Consensus 38 mi~cs~g~ghwvhaqcm~l~e~~l~~lsq~n~ky~c~~ 75 (82)
T 2jwo_A 38 MIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNE 75 (82)
T ss_dssp CEECCSSSCCEECSGGGTCCHHHHHHHTTSSCCCCCST
T ss_pred hhhcCCCcchHHHHHHhhHHHHHHHHHhcCCcEEEEcC
Confidence 77773 228999999999988766655 466788753
No 169
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=77.45 E-value=1.7 Score=50.04 Aligned_cols=35 Identities=20% Similarity=0.158 Sum_probs=30.4
Q ss_pred cCcccEEEEecCCCccEEEEccccCCCCEEEEEee
Q 036712 875 TEKHRVCFGKSGIHGWGLFARRHIQEGEMVVEYRG 909 (1020)
Q Consensus 875 ~~~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~G 909 (1020)
+..+.|++..++++|+||+|+++|++|++|++-..
T Consensus 4 ~~~~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e~P 38 (433)
T 3qww_A 4 EARGGLERFCSAGKGRGLRALRPFHVGDLLFSCPA 38 (433)
T ss_dssp CSSTTEEEEECTTSCEEEEESSCBCTTCEEEEEEC
T ss_pred CCCCcEEEeecCCCcCeEEECCCCCCCCEEEecCC
Confidence 34578999999999999999999999999986543
No 170
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=77.05 E-value=0.45 Score=40.07 Aligned_cols=53 Identities=23% Similarity=0.476 Sum_probs=36.7
Q ss_pred CcCccccccccccCC-CCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHS-DSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~-d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+. .+...+.--.|.|.||..|...-- .....||.|+....
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~-------~~~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL-------KNANTCPTCRKKIN 62 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHH-------HHCSBCTTTCCBCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHH-------HcCCCCCCCCCccC
Confidence 355789999887653 244566667899999999963211 12258999997644
No 171
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=76.84 E-value=2.1 Score=36.73 Aligned_cols=56 Identities=21% Similarity=0.253 Sum_probs=40.1
Q ss_pred CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 219 ~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
|..|++||.|.||.| .-.+-||+|..-. . .+.|-|.|++ .. -.=|+...|.|+...
T Consensus 4 ~~~~~vGd~vmArW~-D~~yYpA~I~si~----~-------~~~Y~V~F~d-G~------~etvk~~~ikp~~~~ 59 (67)
T 3p8d_A 4 SSEFQINEQVLACWS-DCRFYPAKVTAVN----K-------DGTYTVKFYD-GV------VQTVKHIHVKAFSKD 59 (67)
T ss_dssp -CCCCTTCEEEEECT-TSCEEEEEEEEEC----T-------TSEEEEEETT-SC------EEEEEGGGEEECC--
T ss_pred CcccccCCEEEEEcC-CCCEeeEEEEEEC----C-------CCeEEEEEeC-Cc------eEEEeHHHcccCCcc
Confidence 678999999999996 7889999995432 1 1469999997 22 234677778887653
No 172
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=74.33 E-value=2 Score=48.79 Aligned_cols=87 Identities=17% Similarity=0.375 Sum_probs=61.7
Q ss_pred ccCcc--ccCCCCCcCCCCccccccccccCcccchhhHhhhcCc----------CccccccccccCCCCCCceecC--CC
Q 036712 364 YKVAR--VCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSE----------QYCGICKNIWHHSDSGNWVCCD--GC 429 (1020)
Q Consensus 364 ~~~~~--~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g----------~~C~iC~k~y~~~d~~~wv~Cd--~C 429 (1020)
.+..+ .|.+||..-+ . ..|+.- .-.+|..|...|.++ -||.+|. ++++.+.|| .|
T Consensus 45 ~~~~~e~~C~~CG~~~~--~--~~HPl~-~v~lC~~Ck~~y~~~~f~~D~DG~~~yCr~C~------~Gg~l~~Cdn~~C 113 (386)
T 2pv0_B 45 NQRNIEDICICCGSLQV--H--TQHPLF-EGGICAPCKDKFLDALFLYDDDGYQSYCSICC------SGETLLICGNPDC 113 (386)
T ss_dssp SCCCGGGSBTTTCCSCC--C--SBCSSB-SSBCCHHHHHHHHTTTTCBCSSSSBCSCTTTC------CCSSCEECCSTTC
T ss_pred ccCcccceeCCCCCcCc--c--ccCCCc-CcchhhHHHHHHhccCcccCCCCCcccceEcC------CCCeEEEeCCCCC
Confidence 44445 8999998622 1 123333 367899999977754 4789995 578999999 99
Q ss_pred CcEEcCcccccch--hhhccc-CCCceeCCCcCcc
Q 036712 430 NVWVHAECDEISG--KHFKDL-EHIDYYCPNCRVK 461 (1020)
Q Consensus 430 ~~WvH~~C~~~~~--~~~~~l-~~~~Y~Cp~C~~~ 461 (1020)
.+-|=.+|....- ..+..+ ....+.|=-|..+
T Consensus 114 ~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 114 TRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp CCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 9999999987432 233332 3466999999854
No 173
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=73.37 E-value=1.6 Score=40.52 Aligned_cols=60 Identities=17% Similarity=0.276 Sum_probs=47.9
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
..|.+|+.|++..| --|++|+|++-. .. .....|.|-|-|+.. .-| -||..++|++|.+.
T Consensus 21 ~~f~vGekVl~~~~--~~~YeAkIl~v~---~~-----~~~~~Y~VHY~GwNk---R~D-EWV~~~Rl~k~t~e 80 (102)
T 2f5k_A 21 PKFQEGERVLCFHG--PLLYEAKCVKVA---IK-----DKQVKYFIHYSGWNK---NWD-EWVPESRVLKYVDT 80 (102)
T ss_dssp CSCCTTCEEEEESS--SSEEEEEEEEEE---EE-----TTEEEEEEEETTSCG---GGC-EEEEGGGEEESSHH
T ss_pred cccCCCCEEEEEEC--CEEEEEEEEEEE---Ec-----CCCcEEEEEeCCcCC---Cce-eeccHhhcccCCHH
Confidence 47999999999985 468999998864 11 123479999999877 567 99999999999765
No 174
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=71.81 E-value=1.2 Score=41.59 Aligned_cols=64 Identities=17% Similarity=0.237 Sum_probs=35.6
Q ss_pred CcccchhhHhhhcCcCccccccccccCCC-CCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 391 TQFLCKHCSKLQKSEQYCGICKNIWHHSD-SGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 391 ~~~lC~~C~~l~~~g~~C~iC~k~y~~~d-~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
+...|.-|...+. .-|++|+-.+.... +..-+.-..|.|-||..|.. .+-.....||.||....
T Consensus 36 ~~d~CaIC~~~~~--~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~-------~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 36 VVDNCAICRNHIM--DLCIECQANQASATSEECTVAWGVCNHAFHFHCIS-------RWLKTRQVCPLDNREWE 100 (106)
T ss_dssp CSCCCSSSCSCTT--SCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHH-------HHHTTCSBCSSSCSBCC
T ss_pred CCCCCccCChhHh--CcCchhhccccccCCccceEeecccCcEECHHHHH-------HHHHcCCcCcCCCCcce
Confidence 3445555554443 24556653322211 22234445899999999942 22123578999997643
No 175
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=71.65 E-value=1.5 Score=39.62 Aligned_cols=49 Identities=20% Similarity=0.356 Sum_probs=33.9
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
.....|+||...+.+ -+....|.|.||..|..-.- .....||.|+....
T Consensus 20 ~~~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~-------~~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 20 DDLLRCGICFEYFNI-----AMIIPQCSHNYCSLCIRKFL-------SYKTQCPTCCVTVT 68 (99)
T ss_dssp HHHTBCTTTCSBCSS-----EEECTTTCCEEEHHHHHHHH-------TTCCBCTTTCCBCC
T ss_pred CCCCCcccCChhhCC-----cCEECCCCCHhhHHHHHHHH-------HCCCCCCCCCCcCC
Confidence 345679999887754 34446899999999953221 23479999997543
No 176
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=71.61 E-value=0.99 Score=41.16 Aligned_cols=50 Identities=20% Similarity=0.370 Sum_probs=36.1
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
.....|+||...+. .-+.|..|.|.||..|...-- ......||.||....
T Consensus 20 ~~~~~C~IC~~~~~-----~p~~~~~CgH~FC~~Ci~~~~------~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 20 AEVFRCFICMEKLR-----DARLCPHCSKLCCFSCIRRWL------TEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HHHTBCTTTCSBCS-----SEEECTTTCCEEEHHHHHHHH------HHTCSBCTTTCCBCC
T ss_pred CCCCCCccCCcccc-----CccccCCCCChhhHHHHHHHH------HHCcCCCCCCCCcCC
Confidence 44567999988774 368889999999999964221 111279999997653
No 177
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=71.47 E-value=1.2 Score=44.24 Aligned_cols=47 Identities=28% Similarity=0.557 Sum_probs=33.7
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...|+||...+.+ -+....|.|.||..|.... +......||.|+...
T Consensus 54 ~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~------~~~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 54 ELMCPICLDMLKN-----TMTTKECLHRFCADCIITA------LRSGNKECPTCRKKL 100 (165)
T ss_dssp HHBCTTTSSBCSS-----EEEETTTCCEEEHHHHHHH------HHTTCCBCTTTCCBC
T ss_pred CCCCcccChHhhC-----cCEeCCCCChhHHHHHHHH------HHhCcCCCCCCCCcC
Confidence 4568999877653 4666799999999996322 222358899999654
No 178
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.07 E-value=1.1 Score=38.12 Aligned_cols=48 Identities=19% Similarity=0.317 Sum_probs=33.5
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+ -+.-..|.|-||..|....- .....||.|+....
T Consensus 14 ~~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~-------~~~~~CP~Cr~~~~ 61 (72)
T 2djb_A 14 PYILCSICKGYLID-----ATTITECLHTFCKSCIVRHF-------YYSNRCPKCNIVVH 61 (72)
T ss_dssp GGGSCTTTSSCCSS-----CEECSSSCCEECHHHHHHHH-------HHCSSCTTTCCCCC
T ss_pred CCCCCCCCChHHHC-----cCEECCCCCHHHHHHHHHHH-------HcCCcCCCcCcccC
Confidence 35578999876643 35556899999999963221 12478999997654
No 179
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.69 E-value=2.4 Score=35.86 Aligned_cols=46 Identities=22% Similarity=0.384 Sum_probs=31.3
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
...|+||...+.+ .+.- .|.|.||..|.. .+-.....||.|+....
T Consensus 15 ~~~C~IC~~~~~~-----~~~~-~CgH~fC~~Ci~-------~~~~~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 15 VPECAICLQTCVH-----PVSL-PCKHVFCYLCVK-------GASWLGKRCALCRQEIP 60 (71)
T ss_dssp CCBCSSSSSBCSS-----EEEE-TTTEEEEHHHHH-------HCTTCSSBCSSSCCBCC
T ss_pred CCCCccCCcccCC-----CEEc-cCCCHHHHHHHH-------HHHHCCCcCcCcCchhC
Confidence 4568999876633 2333 699999999953 22223479999997654
No 180
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=69.23 E-value=1.8 Score=37.99 Aligned_cols=61 Identities=20% Similarity=0.217 Sum_probs=45.3
Q ss_pred CCCCCCCEEEEeeC--CCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchh
Q 036712 220 EDFALGDLVWAKCG--RSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAE 292 (1020)
Q Consensus 220 ~~~~~gd~VwaK~g--k~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e 292 (1020)
+.|.+|+.|+++.| +.--|.||+|++-. . ....-.|.|-|-|+.. .-| -||..++|..+.+
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~---~-----~~~~~~Y~VHY~gwnk---r~D-EWV~~~ri~~~~~ 66 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTE---I-----DDGEVLYLVHYYGWNV---RYD-EWVKADRIIWPLD 66 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEE---E-----ETTEEEEEEEETTSCC---SSC-EEEEGGGEECSSC
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEE---c-----cCCceEEEEEeCCcCC---Cce-EecChhhcccccc
Confidence 57999999999985 21247899997743 1 1122369999999776 566 9999999987754
No 181
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=68.73 E-value=0.33 Score=45.74 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=21.8
Q ss_pred ecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 425 CCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 425 ~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|.+.||..|...-- .....||.|+....
T Consensus 93 ~~~~CgH~fc~~Ci~~~~-------~~~~~CP~Cr~~~~ 124 (133)
T 4ap4_A 93 VSTECGHVFCSQCLRDSL-------KNANTCPTCRKKIN 124 (133)
T ss_dssp EEETTSBEEEHHHHHHHH-------HHCSBCTTTCCBCC
T ss_pred EeCCCCChhhHHHHHHHH-------HcCCCCCCCCCcCC
Confidence 455799999999953221 12369999997543
No 182
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=68.40 E-value=3.5 Score=41.15 Aligned_cols=83 Identities=19% Similarity=0.499 Sum_probs=59.4
Q ss_pred cccCCCCCcCCCCccccccccccCcccchhhHhhhcC----------cCccccccccccCCCCCCceecC--CCCcEEcC
Q 036712 368 RVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKS----------EQYCGICKNIWHHSDSGNWVCCD--GCNVWVHA 435 (1020)
Q Consensus 368 ~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~----------g~~C~iC~k~y~~~d~~~wv~Cd--~C~~WvH~ 435 (1020)
..|.+||...+- ..|+.- .-.+|..|...|.+ --||.+|. ++++.+.|| .|.+-|=.
T Consensus 37 ~~Ct~CG~~~~~----~~HPlf-~v~lC~~Ck~~y~e~~f~~DeDG~~~yC~wC~------~Gg~l~~Cdn~~C~r~FC~ 105 (159)
T 3a1b_A 37 DICISCGSLNVT----LEHPLF-VGGMCQNCKNCFLECAYQYDDDGYQSYCTICC------GGREVLMCGNNNCCRCFCV 105 (159)
T ss_dssp GSBTTTCCSCCC----EECSSB-SSEECHHHHHHHHHHTTCBCTTSSBSSCTTTS------CCSEEEECSSTTTCCEEEH
T ss_pred CcccCCCCcCcc----ccCCCc-cchhhHHHHHHHhhcccccCCCCCcceeeEec------CCCeEEeeCCCCCCCchhH
Confidence 469999985332 224332 46789999987764 35899995 578999999 89999999
Q ss_pred cccccc--hhhhcc-cCCCceeCCCcCcc
Q 036712 436 ECDEIS--GKHFKD-LEHIDYYCPNCRVK 461 (1020)
Q Consensus 436 ~C~~~~--~~~~~~-l~~~~Y~Cp~C~~~ 461 (1020)
+|.... ...++. .+...+.|=-|..+
T Consensus 106 ~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 106 ECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp HHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred HHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 998743 222333 34566899889843
No 183
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.81 E-value=2.8 Score=35.32 Aligned_cols=51 Identities=24% Similarity=0.473 Sum_probs=33.7
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
.....|+||...+.+ -+.- .|.|.||..|...-- + .......||.|+....
T Consensus 18 ~~~~~C~IC~~~~~~-----~~~~-~CgH~fC~~Ci~~~~---~-~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 18 QEEVICPICLDILQK-----PVTI-DCGHNFCLKCITQIG---E-TSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCCBCTTTCSBCSS-----EEEC-TTCCEEEHHHHHHHC---S-SSCSCCCCSSSCCCCC
T ss_pred ccCCEeccCCcccCC-----eEEc-CCCChhhHHHHHHHH---H-cCCCCCCCCCCCCcCC
Confidence 345678999876642 2333 899999999963211 1 1135689999997654
No 184
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=66.78 E-value=2.1 Score=35.59 Aligned_cols=48 Identities=19% Similarity=0.263 Sum_probs=32.6
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+ -+.--.|.|-||..|...-- .....||.|+....
T Consensus 4 ~~~~C~IC~~~~~~-----~~~~~~C~H~fc~~Ci~~~~-------~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 4 VAERCPICLEDPSN-----YSMALPCLHAFCYVCITRWI-------RQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCSSCCSCCCS-----CEEETTTTEEESTTHHHHHH-------HHSCSTTTTCCCCC
T ss_pred CCCCCeeCCccccC-----CcEecCCCCeeHHHHHHHHH-------hCcCcCcCCChhhH
Confidence 45679999876532 23446799999999963211 12368999997654
No 185
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=66.56 E-value=2.5 Score=38.85 Aligned_cols=50 Identities=18% Similarity=0.328 Sum_probs=35.2
Q ss_pred hcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 402 QKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 402 ~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
......|+||...+.+ -+....|.|.||..|....- .....||.|+....
T Consensus 12 ~~~~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~-------~~~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 12 LNPHLMCVLCGGYFID-----ATTIIECLHSFCKTCIVRYL-------ETSKYCPICDVQVH 61 (108)
T ss_dssp HGGGTBCTTTSSBCSS-----EEEETTTCCEEEHHHHHHHH-------TSCSBCTTTCCBSC
T ss_pred cCCcCCCccCChHHhC-----cCEeCCCCChhhHHHHHHHH-------HhCCcCcCCCcccc
Confidence 3456789999877743 45667899999999953221 22389999996543
No 186
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=65.17 E-value=1.3 Score=42.08 Aligned_cols=63 Identities=17% Similarity=0.239 Sum_probs=0.4
Q ss_pred cccchhhHhhhcCcCccccccccccCCC-CCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 392 QFLCKHCSKLQKSEQYCGICKNIWHHSD-SGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 392 ~~lC~~C~~l~~~g~~C~iC~k~y~~~d-~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
...|.=|...+.. -|++|+-.+.... +..-|.-..|.+.||..|.. .+-...-.||.||....
T Consensus 48 ~d~CaICl~~~~~--~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~-------~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 48 VDNCAICRNHIMD--LCIECQANQASATSEECTVAWGVCNHAFHFHCIS-------RWLKTRQVCPLDNREWE 111 (117)
T ss_dssp C------------------------------------------------------------------------
T ss_pred CCcCeECChhhcC--cChhhhcccccccccccccccCCcCceEcHHHHH-------HHHHcCCcCCCCCCeee
Confidence 3445555554432 4555543222111 22233335799999999952 22223578999997644
No 187
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=64.80 E-value=3.4 Score=38.67 Aligned_cols=37 Identities=24% Similarity=0.562 Sum_probs=27.5
Q ss_pred CcEEEcCCCCchhcCcccCCccc--C---CCCceeeccCCCC
Q 036712 607 NKIIICNRCQIAVHQECYGVTDV--Q---DFTSWVCRACEMP 643 (1020)
Q Consensus 607 n~Ll~Cd~C~~~vH~~CYgv~~~--p---~~~~W~C~~C~~~ 643 (1020)
..|+.|+.|...||..|.++... + ....|.|..|...
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred cceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 45999999999999999976532 1 1245999999864
No 188
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=63.93 E-value=5 Score=46.04 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=27.6
Q ss_pred cccEEEEecCCCccEEEEccccCCCCEEEEEe
Q 036712 877 KHRVCFGKSGIHGWGLFARRHIQEGEMVVEYR 908 (1020)
Q Consensus 877 ~~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~ 908 (1020)
...|....+++.|+||+|+++|++|++|+.-.
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~ 35 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFRSD 35 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEEEC
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEecC
Confidence 35677788999999999999999999998743
No 189
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.67 E-value=1.7 Score=37.70 Aligned_cols=46 Identities=17% Similarity=0.308 Sum_probs=31.7
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
...|+||...+.+ -+. -.|.|.||..|..-.- .....||.|+....
T Consensus 15 ~~~C~IC~~~~~~-----p~~-~~CgH~fC~~Ci~~~~-------~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 15 PFRCFICRQAFQN-----PVV-TKCRHYFCESCALEHF-------RATPRCYICDQPTG 60 (81)
T ss_dssp CSBCSSSCSBCCS-----EEE-CTTSCEEEHHHHHHHH-------HHCSBCSSSCCBCC
T ss_pred CCCCcCCCchhcC-----eeE-ccCCCHhHHHHHHHHH-------HCCCcCCCcCcccc
Confidence 4468999877633 233 5899999999963221 12578999997654
No 190
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.43 E-value=1.2 Score=37.53 Aligned_cols=46 Identities=22% Similarity=0.458 Sum_probs=31.9
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+ .--.|.|.||..|.. .+-.....||.||....
T Consensus 14 ~~~~C~IC~~~~~~-------~~~~CgH~fc~~Ci~-------~~~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 14 DEEECCICMDGRAD-------LILPCAHSFCQKCID-------KWSDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCSSSCCSCCS-------EEETTTEEECHHHHH-------HSSCCCSSCHHHHHCTT
T ss_pred CCCCCeeCCcCccC-------cccCCCCcccHHHHH-------HHHHCcCcCCCcCCccc
Confidence 45678999876543 224699999999953 22224689999997654
No 191
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=66.86 E-value=1.5 Score=39.33 Aligned_cols=60 Identities=23% Similarity=0.390 Sum_probs=47.5
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
..|.+|+.|++..| . -|.+|+|++-. . .. ....|.|-|-|+.. .-| -||..++|++|.+.
T Consensus 11 ~~~~~Gekv~~~~~-~-~~y~AkIl~i~-~--~~-----~~~~YyVHY~GwNk---R~D-EWV~~~Rl~k~t~e 70 (85)
T 2lrq_A 11 TLFVDGERVLCFHG-P-LIYEAKVLKTK-P--DA-----TPVEYYIHYAGWSK---NWD-EWVPENRVLKYNDD 70 (85)
Confidence 46899999999996 3 56899998864 1 11 23579999999877 566 99999999999865
No 192
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=62.79 E-value=2.5 Score=36.13 Aligned_cols=48 Identities=27% Similarity=0.468 Sum_probs=32.1
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
....|+||...+.+ -+.-..|.|.||..|....-. . .....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~-----p~~~~~CgH~fC~~Ci~~~~~---~--~~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTD-----AVVIPCCGNSYCDECIRTALL---E--SDEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTT-----CEECSSSCCEECTTHHHHHHH---H--SSSSCCSSSCCS
T ss_pred CCCCCcCCChHHhC-----CeEcCCCCCHHHHHHHHHHHH---h--cCCCcCCCCCCc
Confidence 34568999877643 344445999999999632221 1 124799999974
No 193
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=61.24 E-value=6.1 Score=34.56 Aligned_cols=54 Identities=20% Similarity=0.425 Sum_probs=35.5
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
.....||||...+...|- ....| .|.|-|+..|.... +....+.||.||.....
T Consensus 9 ~~~~~CpICle~~~~~d~-~~~p~-~CGH~fC~~Cl~~~------~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDI-NFFPC-TCGYQICRFCWHRI------RTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTTT-TCCSS-TTSCCCCHHHHHHH------TTSSCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCccccc-ccccc-CCCCCcCHHHHHHH------HhcCCCCCCCCCCccCC
Confidence 345679999886643332 23334 79999999995321 22356999999987654
No 194
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=61.23 E-value=4.1 Score=45.58 Aligned_cols=58 Identities=31% Similarity=0.394 Sum_probs=38.9
Q ss_pred CccccccccccCCCCCCceecC--CCCcEEcCcccccchh----hhcccCCCceeCCCcCcccc
Q 036712 406 QYCGICKNIWHHSDSGNWVCCD--GCNVWVHAECDEISGK----HFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 406 ~~C~iC~k~y~~~d~~~wv~Cd--~C~~WvH~~C~~~~~~----~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
.-|+||--.+.+++.-.-..|+ .|++-||..|...--. .-..+....-.||.|+....
T Consensus 309 ~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 309 LRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred ccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 3588998877665556667898 8999999999742100 00122234478999997544
No 195
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=60.82 E-value=2.9 Score=40.26 Aligned_cols=45 Identities=24% Similarity=0.442 Sum_probs=30.2
Q ss_pred CccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 406 QYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 406 ~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
..|+||...+.+ -|. -.|.|.||..|.. .+-.....||.||....
T Consensus 54 ~~C~iC~~~~~~-----~~~-~~CgH~fc~~Ci~-------~~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 54 LQCIICSEYFIE-----AVT-LNCAHSFCSYCIN-------EWMKRKIECPICRKDIK 98 (138)
T ss_dssp SBCTTTCSBCSS-----EEE-ETTSCEEEHHHHH-------HHTTTCSBCTTTCCBCC
T ss_pred CCCcccCcccCC-----ceE-CCCCCCccHHHHH-------HHHHcCCcCCCCCCcCC
Confidence 469999877643 232 2699999999952 12223478999996543
No 196
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.65 E-value=2.3 Score=36.62 Aligned_cols=53 Identities=23% Similarity=0.521 Sum_probs=33.4
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+. +. -.|.|.||..|....-.. .........||.|+....
T Consensus 18 ~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~~~-~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 18 EEVTCPICLELLTQP-----LS-LDCGHSFCQACLTANHKK-SMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCTTTCSCCSSC-----BC-CSSSCCBCTTHHHHHHHH-HHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCCCCcccCCc-----ee-CCCCCHHHHHHHHHHHHH-hhcCCCCCcCCCCCCccC
Confidence 456789998776432 22 279999999997432110 001123689999997654
No 197
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=59.48 E-value=2.9 Score=38.66 Aligned_cols=16 Identities=38% Similarity=1.055 Sum_probs=13.6
Q ss_pred CCCceecCCCCcEEcC
Q 036712 420 SGNWVCCDGCNVWVHA 435 (1020)
Q Consensus 420 ~~~wv~Cd~C~~WvH~ 435 (1020)
...|||||.|.+|=-.
T Consensus 25 ~~~WVQCD~C~KWRrL 40 (100)
T 2l7p_A 25 ESAWVRCDDCFKWRRI 40 (100)
T ss_dssp SSEEEECTTTCCEEEE
T ss_pred CCeEEeeCCCCccccC
Confidence 5679999999999655
No 198
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=59.34 E-value=7.8 Score=34.77 Aligned_cols=49 Identities=14% Similarity=0.269 Sum_probs=35.1
Q ss_pred ccCccccCCCCCcCCCCccccccccccCcccchhhHhhhcCcCccccccccccC
Q 036712 364 YKVARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHH 417 (1020)
Q Consensus 364 ~~~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k~y~~ 417 (1020)
+..+.+|..|+..+.+..-- ..++..+|..|+... -+..|..|++...+
T Consensus 30 H~~CF~C~~C~~~L~~~~~~----~~~g~~yC~~cy~~~-~~~~C~~C~~~I~~ 78 (101)
T 2cup_A 30 HDTCFRCAKCLHPLANETFV----AKDNKILCNKCTTRE-DSPKCKGCFKAIVA 78 (101)
T ss_dssp ETTTCCCSSSCCCTTSSCCE----EETTEEECHHHHTTC-CCCBCSSSCCBCCS
T ss_pred hhcCCcccccCCCCCcCeeE----CcCCEEEChhHhhhh-cCCccccCCCcccc
Confidence 78999999999998765411 123688999999644 36678888776543
No 199
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=58.38 E-value=2.3 Score=35.18 Aligned_cols=51 Identities=20% Similarity=0.446 Sum_probs=32.8
Q ss_pred cCccccccc-cccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 405 EQYCGICKN-IWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k-~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
...|+||.. .|.+......+ ..|.|-||..|.... +......||.|+....
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~--~~CgH~fC~~Ci~~~------~~~~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMV--NVCGHTLCESCVDLL------FVRGAGNCPECGTPLR 54 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEE--CTTCCCEEHHHHHHH------HHTTSSSCTTTCCCCS
T ss_pred CCcCCcCCCCccCCCccCeec--CCCCCHhHHHHHHHH------HHcCCCcCCCCCCccc
Confidence 356999988 66443211122 489999999996322 1223578999997644
No 200
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=55.95 E-value=4.3 Score=34.59 Aligned_cols=54 Identities=20% Similarity=0.393 Sum_probs=33.2
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+- .+ -.|.|.||..|....-..-..-......||.|+....
T Consensus 11 ~~~~C~IC~~~~~~p----~~--l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 11 EEVTCPICLELLTEP----LS--LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCEETTTTEECSSC----CC--CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred cCCCCcCCCcccCCe----eE--CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 456689998877442 22 2699999999965321100000123689999997654
No 201
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=55.87 E-value=3.3 Score=39.07 Aligned_cols=38 Identities=21% Similarity=0.706 Sum_probs=30.5
Q ss_pred EEEcCCCCchhcCcccCCcc--------cCCCCceeeccCCCCCcc
Q 036712 609 IIICNRCQIAVHQECYGVTD--------VQDFTSWVCRACEMPNAE 646 (1020)
Q Consensus 609 Ll~Cd~C~~~vH~~CYgv~~--------~p~~~~W~C~~C~~~~~~ 646 (1020)
|+.||.|...+|..|-++.. .|+...|.|+.|......
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~~~ 47 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHVD 47 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTSCC
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccccC
Confidence 78999999999999998864 354468999999865433
No 202
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.22 E-value=3.5 Score=34.16 Aligned_cols=48 Identities=15% Similarity=0.302 Sum_probs=32.2
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+. .+ -.|.|.||..|.... +......||.|+....
T Consensus 14 ~~~~C~IC~~~~~~p----~~--~~CgH~fC~~Ci~~~------~~~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSP----KQ--TECGHRFCESCMAAL------LSSSSPKCTACQESIV 61 (66)
T ss_dssp CCEECTTTCCEESSC----CC--CSSSCCCCHHHHHHH------HTTSSCCCTTTCCCCC
T ss_pred cCCCCCCCChHhcCe----eE--CCCCCHHHHHHHHHH------HHhCcCCCCCCCcCCC
Confidence 345689998777532 11 489999999995322 1234578999997643
No 203
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=54.96 E-value=2 Score=39.31 Aligned_cols=37 Identities=16% Similarity=0.456 Sum_probs=27.4
Q ss_pred cccCCCCCcCCCCccccccccccCcccchhhHhhhcCcCccccccc
Q 036712 368 RVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSEQYCGICKN 413 (1020)
Q Consensus 368 ~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k 413 (1020)
+.|..|+..+ .|.+.+..|..|.+-|++--+||-|++
T Consensus 33 ~~CP~Cq~eL---------~~~g~~~hC~~C~~~f~~~a~CPdC~q 69 (101)
T 2jne_A 33 LHCPQCQHVL---------DQDNGHARCRSCGEFIEMKALCPDCHQ 69 (101)
T ss_dssp CBCSSSCSBE---------EEETTEEEETTTCCEEEEEEECTTTCS
T ss_pred ccCccCCCcc---------eecCCEEECccccchhhccccCcchhh
Confidence 5788888752 123356679999999998889998865
No 204
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=53.92 E-value=3.6 Score=40.77 Aligned_cols=68 Identities=16% Similarity=0.332 Sum_probs=27.9
Q ss_pred CccccCCCCCcCCCCc----cccccccccCcccchhhHhhhc---------------CcCccccccccccCC--------
Q 036712 366 VARVCDGCGLFRPCKL----KRMKGLVSETQFLCKHCSKLQK---------------SEQYCGICKNIWHHS-------- 418 (1020)
Q Consensus 366 ~~~~C~~Cg~~~p~k~----~~~~~~~~~~~~lC~~C~~l~~---------------~g~~C~iC~k~y~~~-------- 418 (1020)
....|..||.....+. ....+ .....+.|..|.+.+. +...|++|++.|...
T Consensus 20 ~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 98 (190)
T 2i13_A 20 KPYACPECGKSFSRSDHLAEHQRTH-TGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR 98 (190)
T ss_dssp -----------CCSSHHHHHGGGCC----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred CCCcCCCCccccCCHHHHHHHHHHc-CCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHH
Confidence 4457888988776665 11111 1223455777765332 223577777666433
Q ss_pred --CCCCceecCCCCcEEc
Q 036712 419 --DSGNWVCCDGCNVWVH 434 (1020)
Q Consensus 419 --d~~~wv~Cd~C~~WvH 434 (1020)
.+.....|+.|++.+-
T Consensus 99 ~h~~~~~~~C~~C~~~f~ 116 (190)
T 2i13_A 99 THTGEKPYACPECGKSFS 116 (190)
T ss_dssp HHHTCCCEECTTTCCEES
T ss_pred hcCCCCCCcCCCCCCccC
Confidence 1334566777766653
No 205
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=53.18 E-value=15 Score=31.40 Aligned_cols=57 Identities=23% Similarity=0.278 Sum_probs=42.1
Q ss_pred CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecC--ccccc
Q 036712 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQG--MLFPF 290 (1020)
Q Consensus 219 ~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~--~i~py 290 (1020)
+..|++|.-|=|.- +.-|++||.|++-. ...+.+.|-|-|++. ..|| |+... .|+|-
T Consensus 10 ~~~F~vGmkLEa~d-~~~p~~~AtV~~v~----------~~~~~~~VhfdGw~~---~~D~-W~~~dS~~i~Pv 68 (69)
T 3sd4_A 10 GISFEVGAQLEARD-RLKNWYPAHIEDID----------YEEGKVLIHFKRWNH---RYDE-WFCWDSPYLRPL 68 (69)
T ss_dssp TCCCSTTCEEEEEC-TTSCEEEEEEEEEE----------TTTTEEEEEETTSCG---GGCE-EEETTCTTEECC
T ss_pred CCCcCCCCEEEEEE-CCCCccccEEEEEe----------ccCCEEEEEeCCCCC---CCCE-EEcCCCCCeeEC
Confidence 46799999998877 56788999997631 013468999999865 6775 99854 47764
No 206
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=52.41 E-value=7.3 Score=35.99 Aligned_cols=47 Identities=30% Similarity=0.595 Sum_probs=31.4
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
...|+||...+.+ ..+- .|.|-||..|.... +....+.||.|+....
T Consensus 15 ~~~C~iC~~~~~~----p~~~--~CgH~fC~~Ci~~~------~~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 15 ECQCGICMEILVE----PVTL--PCNHTLCKPCFQST------VEKASLCCPFCRRRVS 61 (115)
T ss_dssp HHBCTTTCSBCSS----CEEC--TTSCEECHHHHCCC------CCTTTSBCTTTCCBCH
T ss_pred CCCCccCCcccCc----eeEc--CCCCHHhHHHHHHH------HhHCcCCCCCCCcccC
Confidence 4568899876643 2222 79999999995322 2233589999997643
No 207
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=51.68 E-value=5.4 Score=36.43 Aligned_cols=51 Identities=18% Similarity=0.309 Sum_probs=33.2
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
.....|+||...+.+. +. -.|.|.||..|..-.-. .......||.|+....
T Consensus 19 ~~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~~----~~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 19 QKILECPICLELIKEP-----VS-TKCDHIFCKFCMLKLLN----QKKGPSQCPLCKNDIT 69 (112)
T ss_dssp HHHTSCSSSCCCCSSC-----CB-CTTSCCCCSHHHHHHHH----SSSSSCCCTTTSCCCC
T ss_pred cCCCCCcccChhhcCe-----EE-CCCCCHHHHHHHHHHHH----hCCCCCCCcCCCCcCC
Confidence 3456799998877432 22 37999999999632211 1133479999997543
No 208
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=51.30 E-value=18 Score=36.29 Aligned_cols=73 Identities=15% Similarity=0.249 Sum_probs=47.3
Q ss_pred ccCccccCCCCCcCCCCccccccccccCcccchhhHhhhcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchh
Q 036712 364 YKVARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGK 443 (1020)
Q Consensus 364 ~~~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~ 443 (1020)
+..+.+|..|+..+.+..= ..++..+|..|+...- +..|..|++.....+ ++. ..=++++|..|
T Consensus 84 H~~CF~C~~C~~~L~~~~f-----~~~g~~yC~~~y~~~f-~~kC~~C~~~I~~~~---~v~-~a~~~~~H~~C------ 147 (182)
T 2jtn_A 84 HSKCLKCSDCHVPLAERCF-----SRGESVYCKDDFFKRF-GTKCAACQLGIPPTQ---VVR-RAQDFVYHLHC------ 147 (182)
T ss_dssp CSSTTSCTTTCCCCSSCCE-----EETTEEECHHHHHHTT-SCCCTTTCCCCCSSC---CCC-EETTEECCTTT------
T ss_pred ccccCccCCCCCccCCCce-----eECCEeeecCcccccc-ccccccCCCccCCCc---eEE-ecCCCCEEeCC------
Confidence 6789999999988876541 1236888999986432 567888877554321 110 12345667777
Q ss_pred hhcccCCCceeCCCcCcc
Q 036712 444 HFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 444 ~~~~l~~~~Y~Cp~C~~~ 461 (1020)
|.|..|...
T Consensus 148 ---------F~C~~C~~~ 156 (182)
T 2jtn_A 148 ---------FACVVCKRQ 156 (182)
T ss_dssp ---------CCCTTTCCC
T ss_pred ---------CcCCCCCCC
Confidence 688888743
No 209
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=51.09 E-value=6.6 Score=30.78 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=23.2
Q ss_pred cccCCCCCcCCCCccccccccccCcccchhhHhhhcCc
Q 036712 368 RVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSE 405 (1020)
Q Consensus 368 ~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g 405 (1020)
..|..||++...-+ ++.. . +..||+.|+..+++.
T Consensus 2 ~~C~~C~tt~Tp~W--R~gp-~-G~~LCNaCGl~~k~~ 35 (43)
T 2vut_I 2 TTCTNCFTQTTPLW--RRNP-E-GQPLCNACGLFLKLH 35 (43)
T ss_dssp CCCSSSCCCCCSCC--EECT-T-SCEECHHHHHHHHHH
T ss_pred CcCCccCCCCCCcc--ccCC-C-CCcccHHHHHHHHHh
Confidence 57999998754443 2232 2 459999999987753
No 210
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=50.80 E-value=9.9 Score=44.58 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=27.9
Q ss_pred ccEEEEecCCCccEEEEccccCCCCEEEEEe
Q 036712 878 HRVCFGKSGIHGWGLFARRHIQEGEMVVEYR 908 (1020)
Q Consensus 878 ~~l~v~~s~~kG~GVfA~~~I~~Gt~I~EY~ 908 (1020)
..|.+...+..|+||+|+++|++|+.|+.--
T Consensus 93 ~~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP 123 (497)
T 3smt_A 93 EGFEMVNFKEEGFGLRATRDIKAEELFLWVP 123 (497)
T ss_dssp TTEEEEEETTTEEEEEESSCBCTTCEEEEEE
T ss_pred cceEEEEcCCCccEEEEcccCCCCCEEEEcC
Confidence 4789999999999999999999999998754
No 211
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=50.03 E-value=15 Score=33.06 Aligned_cols=61 Identities=20% Similarity=0.169 Sum_probs=46.3
Q ss_pred CCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecC--ccccchhc
Q 036712 218 KPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQG--MLFPFAEF 293 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~--~i~py~e~ 293 (1020)
.+..|.+|.-|=|.- ..-||.||.|..-. . ....+.|-|-|++. ..| .|+... +|+|..-.
T Consensus 16 ~~~~F~vGmkLEA~D-~~~~~~~a~i~~v~---~-------~~~~v~VHfdGW~~---~yD-eWv~~dS~~I~P~g~~ 78 (88)
T 2eqm_A 16 PGITFEIGARLEALD-YLQKWYPSRIEKID---Y-------EEGKMLVHFERWSH---RYD-EWIYWDSNRLRPLERP 78 (88)
T ss_dssp SSCCCCSSCEEEEEC-TTSCEEEEEEEEEE---T-------TTTEEEEEESSSTT---TEE-EEEETTSCCEECCCCC
T ss_pred CcCcCCCCCEEEEEc-CCCCeeEEEEEEEe---c-------cCCEEEEEECCCCC---ccc-EEeeCCCCcEeccccc
Confidence 367899999998888 45688999986421 0 13379999999876 566 899977 89998643
No 212
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=49.18 E-value=6.4 Score=33.60 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=32.5
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+ . |.- .|.|.|+..|.... +......||.|+....
T Consensus 7 ~~~~C~IC~~~~~~----P-v~~-~CgH~fc~~Ci~~~------~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKD----P-VIV-STGQTYERSSIQKW------LDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSS----E-EEE-TTTEEEEHHHHHHH------HTTTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccC----C-EEc-CCCCeecHHHHHHH------HHHCcCCCCCCcCCCC
Confidence 35678999887743 2 222 69999999995321 2223689999996543
No 213
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=48.81 E-value=12 Score=29.85 Aligned_cols=35 Identities=26% Similarity=0.520 Sum_probs=24.0
Q ss_pred CccccCCCCCcCCCCccccccccccCcccchhhHhhhcC
Q 036712 366 VARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKS 404 (1020)
Q Consensus 366 ~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~ 404 (1020)
....|..||++...-+ ++.. . ...||+.|+..+++
T Consensus 3 ~~~~C~~C~tt~Tp~W--R~gp-~-G~~LCNaCGl~~k~ 37 (46)
T 1gnf_A 3 EARECVNCGATATPLW--RRDR-T-GHYLCNACGLYHKM 37 (46)
T ss_dssp CSCCCTTTCCCCCSSC--BCCT-T-CCCBCSHHHHHHHH
T ss_pred CCCCCCCcCCCCCCcC--ccCC-C-CCccchHHHHHHHH
Confidence 4568999998854443 2232 2 35999999987764
No 214
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=48.41 E-value=5.8 Score=37.26 Aligned_cols=48 Identities=21% Similarity=0.462 Sum_probs=32.4
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+ -|.- .|.|-||..|.... +....+.||.|+....
T Consensus 51 ~~~~C~IC~~~~~~-----p~~~-~CgH~fC~~Ci~~~------~~~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 51 ETFQCICCQELVFR-----PITT-VCQHNVCKDCLDRS------FRAQVFSCPACRYDLG 98 (124)
T ss_dssp HHTBCTTTSSBCSS-----EEEC-TTSCEEEHHHHHHH------HHTTCCBCTTTCCBCC
T ss_pred cCCCCCcCChHHcC-----cEEe-eCCCcccHHHHHHH------HhHCcCCCCCCCccCC
Confidence 34568999877653 1222 79999999995322 1234579999997654
No 215
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=47.88 E-value=4.3 Score=34.84 Aligned_cols=53 Identities=25% Similarity=0.459 Sum_probs=33.1
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...+.+. +. -.|.|.||..|....-..- ........||.|+....
T Consensus 18 ~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~~~~~-~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 18 EEVTCPICLELLKEP-----VS-ADCNHSFCRACITLNYESN-RNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TTTSCTTTCSCCSSC-----EE-CTTSCCBCHHHHHHHHHHS-BCTTSCBCCTTTCCCCC
T ss_pred cCCCCcCCChhhCcc-----ee-CCCCCHHHHHHHHHHHHhc-cCCCCCCCCCCCCCcCC
Confidence 355789998776432 23 3599999999974321100 01123689999997654
No 216
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=47.80 E-value=9.1 Score=35.95 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=46.5
Q ss_pred CCCCCCCEEEEeeCCC----CCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 220 EDFALGDLVWAKCGRS----YPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~----~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
..|..|+-|.+.=| . --+.+|.|++-...-++.- .....|.|-|.|+.. +-| -||.+++|++|.+.
T Consensus 18 ~~F~~GEkVLc~hg-d~~k~~~lYeAKIl~v~~~~~~~g---~~~~~Y~VHY~GWn~---~wD-EWV~e~rllk~~ee 87 (110)
T 3m9p_A 18 FKFHSGEKVLCFEP-DPTKARVLYDAKIVDVIVGKDEKG---RKIPEYLIHFNGWNR---SWD-RWAAEDHVLRDTDE 87 (110)
T ss_dssp CCSCTTCEEEEECS-CTTSCCCEEEEEEEEEEEEECTTC---CEEEEEEEEETTSCG---GGC-EEEEGGGEEECCHH
T ss_pred CcccCCCEEEEEcC-CCCCCCCceeeEEEEEEeccCccc---ccceEEEEEECCCCc---chh-hccCHhhhhcCCHH
Confidence 46999999999875 1 2367899988641101100 001379999999888 677 99999999999655
No 217
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=47.00 E-value=16 Score=33.21 Aligned_cols=61 Identities=16% Similarity=0.300 Sum_probs=47.2
Q ss_pred ccccCCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccc
Q 036712 214 KDVYKPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLF 288 (1020)
Q Consensus 214 ~~~~~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~ 288 (1020)
++++.+..|.+|+.|+++-+ --|-+|+|++-. .. .....|.|-|-|+.. .-| -||..++|-
T Consensus 16 ~~~~~~~~~~vG~kv~v~~~--~~~y~AkIl~ir-~~-------~~~~~YyVHY~g~Nk---RlD-EWV~~~rl~ 76 (92)
T 2ro0_A 16 KKINSVDDIIIKCQCWVQKN--DEERLAEILSIN-TR-------KAPPKFYVHYVNYNK---RLD-EWITTDRIN 76 (92)
T ss_dssp ECCSCTTSCCTTCEEEEEET--TEEEEEEEEEEE-CS-------SSSCEEEEEETTSCT---TSC-EEEEGGGEE
T ss_pred ccccccccccCCCEEEEEEC--CEEEEEEEEEEE-Ec-------CCCcEEEEEeCCcCc---ccc-cccCHhHcc
Confidence 38899999999999999974 457889998754 11 124579999999665 345 899999984
No 218
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=46.63 E-value=17 Score=34.04 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=36.6
Q ss_pred ccCccccCCCCCcCCCCc-cccccccccCcccchhhHhhhcCcCccccccccccC
Q 036712 364 YKVARVCDGCGLFRPCKL-KRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHH 417 (1020)
Q Consensus 364 ~~~~~~C~~Cg~~~p~k~-~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k~y~~ 417 (1020)
+..+.+|..|+..+.+.. -. .++..+|..|+... -+..|..|++...+
T Consensus 27 H~~CF~C~~C~~~L~~~~f~~-----~~g~~yC~~cy~~~-~~~~C~~C~~~I~~ 75 (126)
T 2xqn_T 27 HLKHFCCFDCDSILAGEIYVM-----VNDKPVCKPCYVKN-HAVVCQGCHNAIDP 75 (126)
T ss_dssp CGGGSBCTTTCCBCTTSEEEE-----ETTEEEEHHHHHHH-SCCBCTTTCSBCCT
T ss_pred cCCCCCcCCCCCCCCcCEEEe-----ECCEEechHHhCcC-cCccCcccCCcCCc
Confidence 778999999999988765 21 23689999999754 36778888886654
No 219
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=46.06 E-value=3.8 Score=40.64 Aligned_cols=95 Identities=20% Similarity=0.370 Sum_probs=57.9
Q ss_pred CccccCCCCCcCCCCc----cccccccccCcccchhhHhhhc---------------CcCccccccccccCC--------
Q 036712 366 VARVCDGCGLFRPCKL----KRMKGLVSETQFLCKHCSKLQK---------------SEQYCGICKNIWHHS-------- 418 (1020)
Q Consensus 366 ~~~~C~~Cg~~~p~k~----~~~~~~~~~~~~lC~~C~~l~~---------------~g~~C~iC~k~y~~~-------- 418 (1020)
....|..||.....+. ....+ .....+.|..|.+.+. +..-|++|++.|...
T Consensus 48 ~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 126 (190)
T 2i13_A 48 KPYKCPECGKSFSDKKDLTRHQRTH-TGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR 126 (190)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHH-HCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred CCccCCCcCchhCCHHHHHHHHHhc-CCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence 4457888988776654 11111 1223467888877542 345799999988654
Q ss_pred --CCCCceecCCCCcEEcCcccccchhhhc-ccCCCceeCCCcCcccc
Q 036712 419 --DSGNWVCCDGCNVWVHAECDEISGKHFK-DLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 419 --d~~~wv~Cd~C~~WvH~~C~~~~~~~~~-~l~~~~Y~Cp~C~~~~~ 463 (1020)
.+.....|+.|++.+-..=.=. .++. -.....|.|+.|...+.
T Consensus 127 ~h~~~~~~~C~~C~~~f~~~~~L~--~H~~~H~~~~~~~C~~C~~~f~ 172 (190)
T 2i13_A 127 THTGEKPYKCPECGKSFSREDNLH--THQRTHTGEKPYKCPECGKSFS 172 (190)
T ss_dssp HHHCCCCEECTTTCCEESCHHHHH--HHHHHHHCCCCEECTTTCCEES
T ss_pred HhCCCCCeECCCCCcccCCHHHHH--HHHHhcCCCCCeECCCCCCccC
Confidence 1456788999999875432100 0111 11345699999997654
No 220
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=45.96 E-value=20 Score=28.85 Aligned_cols=53 Identities=21% Similarity=0.153 Sum_probs=34.9
Q ss_pred CCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCcccc
Q 036712 221 DFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFP 289 (1020)
Q Consensus 221 ~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~p 289 (1020)
.|++||++-||...---|.+|+|..-. +. .+.+.|+|-++. +..-|....|.|
T Consensus 1 ~wk~G~~c~A~~s~Dg~wYrA~I~~i~---~~-------~~~~~V~fvDYG------n~e~v~~~~lrp 53 (54)
T 3s6w_A 1 MWKPGDECFALYWEDNKFYRAEVEALH---SS-------GMTAVVKFIDYG------NYEEVLLSNIKP 53 (54)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEC-----C-------CSEEEEEETTTC------CEEEEEGGGEEC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEe---CC-------CCEEEEEEEccC------CeEEEeHHHEEE
Confidence 478999999998322358999996532 11 246889998733 345566666655
No 221
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=45.76 E-value=7.8 Score=30.82 Aligned_cols=35 Identities=29% Similarity=0.698 Sum_probs=22.5
Q ss_pred CccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcc
Q 036712 406 QYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 406 ~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
--|.+|+-+|.+..+.. ..++++ ..+|.||.|...
T Consensus 5 y~C~vCGyvyd~~~Gd~--------------------t~f~~l-P~dw~CP~Cg~~ 39 (46)
T 6rxn_A 5 YVCNVCGYEYDPAEHDN--------------------VPFDQL-PDDWCCPVCGVS 39 (46)
T ss_dssp EEETTTCCEECGGGGTT--------------------CCGGGS-CTTCBCTTTCCB
T ss_pred EECCCCCeEEeCCcCCC--------------------cchhhC-CCCCcCcCCCCc
Confidence 45788887776543322 235566 345999999964
No 222
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.80 E-value=5.6 Score=34.71 Aligned_cols=30 Identities=27% Similarity=0.608 Sum_probs=24.7
Q ss_pred cccccccCCCceeeecCCcccccccccccc
Q 036712 697 KSCIICKQTHGSCTQCCKCATYFHAMCASR 726 (1020)
Q Consensus 697 ~~C~iC~~~~Ga~IqC~~C~~~FHv~CAr~ 726 (1020)
..|.||+...-..+.|..|...||..|..+
T Consensus 16 ~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCETCGIRMHLPCVAK 45 (74)
T ss_dssp CBCSSSCCBCSSSEECSSSCCEECHHHHHH
T ss_pred CcCcchhhHcccCCccCCCCchhhHHHHHH
Confidence 579999976555578889999999999853
No 223
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.53 E-value=7 Score=31.10 Aligned_cols=45 Identities=27% Similarity=0.569 Sum_probs=29.4
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNC 458 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C 458 (1020)
....|+||...+.+. +. -.|.|.||..|.... +..+ .....||.|
T Consensus 14 ~~~~C~IC~~~~~~p-----~~-~~CgH~fC~~Ci~~~---~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEP-----VI-IECGHNFCKACITRW---WEDL-ERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSC-----CC-CSSCCCCCHHHHHHH---TTSS-CCSCCCSCC
T ss_pred cCCCCccCCcccCcc-----Ee-CCCCCccCHHHHHHH---HHhc-CCCCCCCCC
Confidence 456789998877542 22 369999999996322 1111 245889987
No 224
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=44.22 E-value=9.1 Score=33.02 Aligned_cols=16 Identities=31% Similarity=0.893 Sum_probs=13.5
Q ss_pred CCCceecC--CCCcEEcC
Q 036712 420 SGNWVCCD--GCNVWVHA 435 (1020)
Q Consensus 420 ~~~wv~Cd--~C~~WvH~ 435 (1020)
...||||| .|.+|=-.
T Consensus 15 ~~~WVQCd~p~C~KWR~L 32 (69)
T 2e61_A 15 CLVWVQCSFPNCGKWRRL 32 (69)
T ss_dssp CCCEEECSSTTTCCEEEC
T ss_pred CCeEEEeCccccCcccCC
Confidence 46799999 99999655
No 225
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=44.21 E-value=10 Score=36.85 Aligned_cols=67 Identities=19% Similarity=0.255 Sum_probs=47.0
Q ss_pred CCCCCCEEEEeeCCCCCCCCceecCCCCC---Cchh---------h-----hccc-------------CCCeEEEEEecc
Q 036712 221 DFALGDLVWAKCGRSYPAWPAVVIDPILQ---APEA---------V-----LRCC-------------IPGCLCVMFFGY 270 (1020)
Q Consensus 221 ~~~~gd~VwaK~gk~~p~WPa~v~~p~~~---~p~~---------~-----~~~~-------------~~~~~~V~FfG~ 270 (1020)
.|.+|+.|.|..| --+++|+|++-..- .... + .+.. ....|.|-|-|+
T Consensus 9 ~f~~gekvl~~hg--~llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GW 86 (136)
T 2k3y_A 9 EFALGGRVLAFHG--PLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIHYQGW 86 (136)
T ss_dssp SCCTTSEEEEECS--SCEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEECCTTS
T ss_pred ccCCCCEEEEEEC--CeeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEEeCCc
Confidence 5999999999997 34999999874310 0000 0 0000 022899999998
Q ss_pred cCCCCCcceeeeecCccccchhc
Q 036712 271 SKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 271 ~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
.. +-| -||..++|.+|.|.
T Consensus 87 n~---rwD-EWV~~dRil~~~ee 105 (136)
T 2k3y_A 87 KS---SWD-EWVGYDRIRAYNEE 105 (136)
T ss_dssp CG---GGC-EEEETTTEEESCHH
T ss_pred CC---cce-eeecHhhhhhCCHh
Confidence 87 567 99999999999765
No 226
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=44.17 E-value=15 Score=31.67 Aligned_cols=34 Identities=21% Similarity=0.583 Sum_probs=24.2
Q ss_pred hcCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 402 QKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 402 ~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
+..-.+|..|+... ....++|..|+.-+|.+|..
T Consensus 32 ~~~pt~C~~C~~~l----~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 32 RGGPGWCDLCGREV----LRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp CSSCCBCTTTSSBC----SSCCEECTTSSCEECTGGGG
T ss_pred CCCCcchhhhhHHH----HhCcCccCCCCCeechhhhc
Confidence 34445555555543 35789999999999999964
No 227
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=43.88 E-value=15 Score=38.87 Aligned_cols=52 Identities=21% Similarity=0.624 Sum_probs=35.8
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccCCC
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKFQS 466 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~~~ 466 (1020)
-..|.+|+.+-.. =+.|..|+.-+|..|...- ++ ....-.||.|...-+...
T Consensus 180 i~~C~iC~~iv~~-----g~~C~~C~~~~H~~C~~~~---~~--~~~~~~CP~C~~~W~~~~ 231 (238)
T 3nw0_A 180 VKICNICHSLLIQ-----GQSCETCGIRMHLPCVAKY---FQ--SNAEPRCPHCNDYWPHEI 231 (238)
T ss_dssp CCBCTTTCSBCSS-----CEECSSSCCEECHHHHHHH---TT--TCSSCBCTTTCCBCCSCC
T ss_pred CCcCcchhhHHhC-----CcccCccChHHHHHHHHHH---HH--hCCCCCCCCCCCCCCCCC
Confidence 4568888776653 2889899999999996321 11 124579999998665543
No 228
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=43.07 E-value=26 Score=28.08 Aligned_cols=44 Identities=18% Similarity=0.351 Sum_probs=31.0
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
...|+||...|.+- .. -.|.|-|+..|... ....||.|+.....
T Consensus 6 ~~~C~IC~~~~~~p---~~---l~CgH~fC~~Ci~~----------~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 6 FLRCQQCQAEAKCP---KL---LPCLHTLCSGCLEA----------SGMQCPICQAPWPL 49 (56)
T ss_dssp CSSCSSSCSSCBCC---SC---STTSCCSBTTTCSS----------SSSSCSSCCSSSSC
T ss_pred CCCceEeCCccCCe---EE---cCCCCcccHHHHcc----------CCCCCCcCCcEeec
Confidence 44689998877542 22 35899999999533 35789999976554
No 229
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=42.80 E-value=16 Score=42.08 Aligned_cols=33 Identities=24% Similarity=0.541 Sum_probs=26.5
Q ss_pred cccEEEEec-CCCccEEEEccccCCCCEEEEEee
Q 036712 877 KHRVCFGKS-GIHGWGLFARRHIQEGEMVVEYRG 909 (1020)
Q Consensus 877 ~~~l~v~~s-~~kG~GVfA~~~I~~Gt~I~EY~G 909 (1020)
.+.|.|... +..|+||+|+++|++|+.|+.---
T Consensus 37 ~~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~ 70 (449)
T 3qxy_A 37 SPKVAVSRQGTVAGYGMVARESVQAGELLFVVPR 70 (449)
T ss_dssp CTTEEEESSSCSSSSEEEESSCBCTTCEEEEEEG
T ss_pred CCceEEEecCCCceEEEEECCCCCCCCEEEEeCc
Confidence 356887764 478999999999999999986543
No 230
>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*
Probab=42.74 E-value=13 Score=31.55 Aligned_cols=37 Identities=14% Similarity=0.319 Sum_probs=25.5
Q ss_pred CccccCCCCCcCCCCccccccccccCcccchhhHhhhcCcC
Q 036712 366 VARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSEQ 406 (1020)
Q Consensus 366 ~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g~ 406 (1020)
....|..||++...-+ ++.. . +..||+.|+..+++..
T Consensus 6 ~~~~C~~C~tt~Tp~W--R~gp-~-G~~LCNACGl~~~~~~ 42 (63)
T 3dfx_A 6 AGTSCANCQTTTTTLW--RRNA-N-GDPVCNACGLYYKLHN 42 (63)
T ss_dssp TTCCCTTTCCSCCSSC--CCCT-T-SCCCCHHHHHHHHHHS
T ss_pred CCCcCCCcCCCCCCcc--CCCC-C-CCchhhHHHHHHHHcC
Confidence 4567999999854443 2232 2 3499999999987654
No 231
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=42.56 E-value=13 Score=34.49 Aligned_cols=67 Identities=15% Similarity=0.105 Sum_probs=46.6
Q ss_pred CCCCCCCEEEEeeC---CCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 220 EDFALGDLVWAKCG---RSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 220 ~~~~~gd~VwaK~g---k~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
..|.+|+.|++--+ ++--++.|.|++-. . .+.. .......|.|-|-|+.. +-| -||.+++|.+|.+.
T Consensus 18 ~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~-~-~~~~-~~~~~~~Y~VHY~GWn~---rwD-EWV~edRilk~~ee 87 (101)
T 3m9q_A 18 PLFHKGEIVLCYEPDKSKARVLYTSKVLNVF-E-RRNE-HGLRFYEYKIHFQGWRP---SYD-RAVRATVLLKDTEE 87 (101)
T ss_dssp CCCCTTCEEEEECCCTTSCCCEEEEEEEEEE-E-EECT-TSCEEEEEEEEETTSCG---GGC-EEECGGGEEECCHH
T ss_pred CcccCCCEEEEEecCCCCCCcceEeEEEEEE-e-cCCc-cccCceEEEEEeCCCCc---Cce-eecCHHHcccCCHH
Confidence 46999999999873 12346788887753 1 0000 00113379999999988 677 99999999999655
No 232
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=42.47 E-value=26 Score=34.66 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=49.3
Q ss_pred ccCccccCCCCCcCCCCccccccccccCcccchhhHhhhcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchh
Q 036712 364 YKVARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGK 443 (1020)
Q Consensus 364 ~~~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~ 443 (1020)
+..+.+|..|+..+.+..= ..++..+|..|+...- +..|..|++..... ++|. ..=++.+|.+|
T Consensus 30 H~~CF~C~~C~~~L~~~~f-----~~~g~~yC~~~y~~~f-~~~C~~C~~~I~~~---~~v~-~a~~~~~H~~C------ 93 (169)
T 2rgt_A 30 HSKCLKCSDCHVPLAERCF-----SRGESVYCKDDFFKRF-GTKCAACQLGIPPT---QVVR-RAQDFVYHLHC------ 93 (169)
T ss_dssp CTTTSBCTTTCCBCCSCCE-----ESSSCEECHHHHHHHH-SCBCTTTCCBCCTT---SEEE-EETTEEEEGGG------
T ss_pred ccccCccCCCCCcCCCCCc-----ccCCeeeecccccccc-cccccccccccCCC---cEEE-EcCCceEeeCC------
Confidence 7899999999998877541 1236899999986433 57788888755432 2221 12356778777
Q ss_pred hhcccCCCceeCCCcCc
Q 036712 444 HFKDLEHIDYYCPNCRV 460 (1020)
Q Consensus 444 ~~~~l~~~~Y~Cp~C~~ 460 (1020)
|.|..|..
T Consensus 94 ---------F~C~~C~~ 101 (169)
T 2rgt_A 94 ---------FACVVCKR 101 (169)
T ss_dssp ---------CBCTTTCC
T ss_pred ---------CcCCCCCC
Confidence 78888874
No 233
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=41.92 E-value=9.6 Score=35.80 Aligned_cols=67 Identities=15% Similarity=0.197 Sum_probs=43.9
Q ss_pred CCCCCCCEEEEee-C--CCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 220 EDFALGDLVWAKC-G--RSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 220 ~~~~~gd~VwaK~-g--k~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
-.|..|+.|.+== + ++--.+-|.|++-. . -++. .......|.|-|-|+.. +-| -||.+.+|.+|.|.
T Consensus 18 ~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~-~-~~~~-~~~~~~~Y~VHY~GWn~---~WD-EWV~~drllk~nee 87 (110)
T 3oa6_A 18 FKFHSGEKVLCFEPDPTKARVLYDAKIVDVI-V-GKDE-KGRKIPEYLIHFNGWNR---SWD-RWAAEDHVLRDTDE 87 (110)
T ss_dssp CCSCTTCEEEEECSCTTSCCCEEEEEEEEEE-E-EECT-TCCEEEEEEEEETTSCG---GGC-EEEEGGGEEECCHH
T ss_pred cccCCCCEEEEEecCCCCCcccEEEEEEEEE-e-ccCC-cCCcccEEEEEECCcCc---chh-hccChhhhhcCCHH
Confidence 4699999999843 1 11224788887753 0 0110 00012269999999998 566 79999999999655
No 234
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=41.92 E-value=11 Score=34.06 Aligned_cols=87 Identities=15% Similarity=0.240 Sum_probs=47.5
Q ss_pred cCccccCCCCCcCCCCccccccccccCcccchhhHhhhcCcCccccccccccC-------------CCCCCceecCCCCc
Q 036712 365 KVARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSEQYCGICKNIWHH-------------SDSGNWVCCDGCNV 431 (1020)
Q Consensus 365 ~~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k~y~~-------------~d~~~wv~Cd~C~~ 431 (1020)
.....|.-||.....+..-..|.... .-.+...|++|.+.|.. ..+.....|+.|++
T Consensus 5 ~~~~~C~~C~~~f~~~~~l~~H~~~h----------~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~ 74 (124)
T 2dlq_A 5 SSGVECPTCHKKFLSKYYLKVHNRKH----------TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQE 74 (124)
T ss_dssp CSSCCCTTTCCCCSSHHHHHHHHHHH----------SSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCC
T ss_pred CCCCCCCCCCCcCCCHHHHHHHHHhC----------CCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCC
Confidence 34567999998776655111110000 01133457777776632 23456788999998
Q ss_pred EEcCcccccchhhhc-ccCCCceeCCCcCcccc
Q 036712 432 WVHAECDEISGKHFK-DLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 432 WvH~~C~~~~~~~~~-~l~~~~Y~Cp~C~~~~~ 463 (1020)
.|-..=.=. .++. -.....|.|+.|...+.
T Consensus 75 ~f~~~~~l~--~H~~~h~~~~~~~C~~C~~~f~ 105 (124)
T 2dlq_A 75 TFRRRMELR--LHMVSHTGEMPYKCSSCSQQFM 105 (124)
T ss_dssp EESSHHHHH--HHHHHHSSSCSEECSSSCCEES
T ss_pred ccCCHHHHH--HHHHHcCCCCCccCCCccchhC
Confidence 875432110 0111 11345699999997765
No 235
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.85 E-value=7.4 Score=31.76 Aligned_cols=46 Identities=26% Similarity=0.493 Sum_probs=30.1
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNC 458 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C 458 (1020)
.....|+||...+.+ -+.- .|.|.||..|...--+ . ......||.|
T Consensus 18 ~~~~~C~IC~~~~~~-----p~~~-~CgH~fC~~Ci~~~~~---~-~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQK-----PVTI-DCGHNFCLKCITQIGE---T-SCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSS-----CEEC-TTSSEECHHHHHHHHH---H-CSSCCCCSCC
T ss_pred ccCCCCCcCCchhCC-----eEEe-CCCCcchHHHHHHHHH---c-CCCCCcCcCC
Confidence 445678999876643 2333 8999999999642211 1 1245789987
No 236
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=40.75 E-value=10 Score=38.41 Aligned_cols=66 Identities=14% Similarity=0.153 Sum_probs=42.3
Q ss_pred ccCccccCCCCCcCCC--CccccccccccCcccchhhHhhhcCcC-ccccccccccCCCCCCceecCCCCcEEcCcc
Q 036712 364 YKVARVCDGCGLFRPC--KLKRMKGLVSETQFLCKHCSKLQKSEQ-YCGICKNIWHHSDSGNWVCCDGCNVWVHAEC 437 (1020)
Q Consensus 364 ~~~~~~C~~Cg~~~p~--k~~~~~~~~~~~~~lC~~C~~l~~~g~-~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C 437 (1020)
+..+.+|..|+..+.. ..-- ..++..+|..|+....... .|..|++.....+ ..|.- -++-+|..|
T Consensus 29 H~~CF~C~~C~~~L~~~g~~~~----~~~g~~yC~~cy~~~~~~~~~C~~C~~~I~~~e--~~i~a--~~~~~H~~C 97 (188)
T 1rut_X 29 HSRCLKCSSCQAQLGDIGTSSY----TKSGMILCRNDYIRLFGNSGACSACGQSIPASE--LVMRA--QGNVYHLKC 97 (188)
T ss_dssp CGGGCBCTTTCCBHHHHCSEEE----EETTEEECHHHHHHHHSCCEECTTTCCEECTTS--EEEEE--TTEEECGGG
T ss_pred cccCcccCCCCcccccCCceEE----EeCCccccccccccccccCCccccCCCccccCc--EEEEc--CCCEEeCCC
Confidence 7889999999998764 3300 1226899999997654333 7999988654432 12222 245667777
No 237
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.47 E-value=12 Score=32.89 Aligned_cols=52 Identities=23% Similarity=0.422 Sum_probs=30.3
Q ss_pred CcccccccccCccCCCCcEEE---cCCCCchhcCcccCCcccCCCCceeeccCCCCC
Q 036712 591 TTERCAICRWVEDWDYNKIII---CNRCQIAVHQECYGVTDVQDFTSWVCRACEMPN 644 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~---Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~~~ 644 (1020)
.++.|.||...... .+.|+. |.+..-.||+.|.-.=-... +...|+.|+...
T Consensus 14 ~~~~C~IC~~~~~~-~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~-~~~~CplCr~~~ 68 (80)
T 2d8s_A 14 SQDICRICHCEGDD-ESPLITPCHCTGSLHFVHQACLQQWIKSS-DTRCCELCKYEF 68 (80)
T ss_dssp TSCCCSSSCCCCCS-SSCEECSSSCCSSSCCEETTHHHHHHHHH-CCSBCSSSCCBC
T ss_pred CCCCCeEcCccccC-CCeeEeccccCCcCCeeCHHHHHHHHhhC-CCCCCCCCCCee
Confidence 45789999975432 345553 22234899999971110000 234799998654
No 238
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=46.51 E-value=5.9 Score=35.25 Aligned_cols=57 Identities=21% Similarity=0.237 Sum_probs=39.7
Q ss_pred CCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 218 KPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
-|..|++||.|-||.. ---|-||+|..-. . .+.+-|+|.+ +| -.=|....|.|..+-
T Consensus 3 ~~~~~kvGd~clAkws-Dg~wY~A~I~~v~----~-------~~~y~V~F~D--Gn-----~E~V~~s~LrPl~~~ 59 (81)
T 2ldm_A 3 MSSEFQINEQVLASWS-DSRFYPAKVTAVN----K-------DGTYTVKFYD--GV-----VQTVKHIHVKAFSKD 59 (81)
Confidence 3788999999999994 5579999995532 1 2368888885 22 233555668888644
No 239
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.21 E-value=30 Score=30.08 Aligned_cols=56 Identities=21% Similarity=0.220 Sum_probs=40.3
Q ss_pred CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 219 ~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
+..|++||.|-||.. ---|-||+|..-. . .+.+.|+|.++ +--=|...+|.|..+.
T Consensus 7 ~~~~kvGd~clA~ws-Dg~~Y~A~I~~v~----~-------~~~~~V~f~Dy-------n~e~v~~~~lrplp~~ 62 (74)
T 2equ_A 7 GFDFKAGEEVLARWT-DCRYYPAKIEAIN----K-------EGTFTVQFYDG-------VIRCLKRMHIKAMPED 62 (74)
T ss_dssp CCCCCTTCEEEEECS-SSSEEEEEEEEES----T-------TSSEEEEETTS-------CEEEECGGGEECCCGG
T ss_pred CCCCCCCCEEEEECC-CCCEEEEEEEEEC----C-------CCEEEEEEecC-------CeEEecHHHCeeCChh
Confidence 467999999999994 5568999995432 1 25689999984 2344566778887653
No 240
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=39.81 E-value=20 Score=32.71 Aligned_cols=61 Identities=15% Similarity=0.256 Sum_probs=46.6
Q ss_pred ccccCCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccc
Q 036712 214 KDVYKPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLF 288 (1020)
Q Consensus 214 ~~~~~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~ 288 (1020)
++.+.+..|.+|+.|+++-+ --|-+|+|+.-. .. .....|.|-|-|+.. .-| -||..++|-
T Consensus 18 ~~~~~~~~~~vG~kv~v~~~--~~~yeAeIl~ir-~~-------~g~~~YYVHY~g~Nk---RlD-EWV~~~RI~ 78 (94)
T 2rnz_A 18 GSHMSVDDIIIKCQCWVQKN--DEERLAEILSIN-TR-------KAPPKFYVHYVNYNK---RLD-EWITTDRIN 78 (94)
T ss_dssp SCSSCGGGCCTTEEEEEECS--SCEEEEEEEEEE-CS-------SSSCEEEEECTTSCS---TTC-EEEETTTBC
T ss_pred CCccccccccCCCEEEEEEC--CEEEEEEEEEEE-Ec-------CCCcEEEEEeCCcCc---ccc-cccCHHHcc
Confidence 37888899999999999974 457889998754 11 123579999999655 345 899999984
No 241
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=39.72 E-value=12 Score=36.65 Aligned_cols=73 Identities=23% Similarity=0.605 Sum_probs=50.0
Q ss_pred ccccCCCCCcCCCCc--c-ccccc---cccCcccchhhHhhhcCcCccccccccccCCCCCCceecCCCCcEEcCccccc
Q 036712 367 ARVCDGCGLFRPCKL--K-RMKGL---VSETQFLCKHCSKLQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEI 440 (1020)
Q Consensus 367 ~~~C~~Cg~~~p~k~--~-~~~~~---~~~~~~lC~~C~~l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~ 440 (1020)
.++|.-|+...|+.- . ...|. ......+|..|.+...-.+.|+-|+..++. --|+.|+.| |
T Consensus 27 ~lr~pCC~k~y~Cr~CHde~~dH~l~r~~~~~vlCg~C~~~q~~~~~C~~Cg~~f~~------Y~C~~C~l~-----d-- 93 (143)
T 2dkt_A 27 LLKAPCCDKLYTCRLCHDTNEDHQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLFGE------YYCSICHLF-----D-- 93 (143)
T ss_dssp EEEETTTTEEESSHHHHHHTSSSCCCSSSCCCEEESSSCCEECSCSBCSSSCCBSCS------EECSSSCCE-----E--
T ss_pred eEECCCCCCccchhhhhccccccccchhccceeeecccCccccccCcCCCCCcccee------eEeceeecc-----c--
Confidence 477888887666543 1 11111 123478899999999999999999876644 479999999 2
Q ss_pred chhhhcccCCCceeCCCcC
Q 036712 441 SGKHFKDLEHIDYYCPNCR 459 (1020)
Q Consensus 441 ~~~~~~~l~~~~Y~Cp~C~ 459 (1020)
.+ ...|+|+.|-
T Consensus 94 ~~-------k~~yHC~~Cg 105 (143)
T 2dkt_A 94 KD-------KRQYHCESCG 105 (143)
T ss_dssp CS-------SSEEEETTTT
T ss_pred CC-------CceecCCCCC
Confidence 11 2349998887
No 242
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=38.43 E-value=10 Score=37.13 Aligned_cols=48 Identities=23% Similarity=0.442 Sum_probs=32.5
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
...|+||...+.+ -+. -.|.+.|+..|.... +....+.||.|+.....
T Consensus 78 ~~~C~IC~~~~~~-----pv~-~~CgH~fC~~Ci~~~------~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 78 SFMCVCCQELVYQ-----PVT-TECFHNVCKDCLQRS------FKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HTBCTTTSSBCSS-----EEE-CTTSCEEEHHHHHHH------HHTTCCBCTTTCCBCCT
T ss_pred CCEeecCChhhcC-----CEE-cCCCCchhHHHHHHH------HHhCCCcCCCCCccCCC
Confidence 4568999877643 222 489999999996322 22345799999976543
No 243
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=38.02 E-value=6.5 Score=36.66 Aligned_cols=53 Identities=23% Similarity=0.486 Sum_probs=35.1
Q ss_pred CcCccccccccccCC-CCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 404 SEQYCGICKNIWHHS-DSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~-d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
....|+||...|.+. .+...+.--.|.|-||..|...- -.....||.|+....
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~-------~~~~~~CP~Cr~~~~ 59 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDS-------LKNANTCPTCRKKIN 59 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHH-------HTTCSBCTTTCCBCT
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHH-------HHhCCCCCCCCCcCc
Confidence 455799999877553 12334445689999999995322 122359999996543
No 244
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=37.38 E-value=33 Score=34.59 Aligned_cols=43 Identities=14% Similarity=0.084 Sum_probs=30.4
Q ss_pred ccCccccCCCCCcCCCCc-cccccccccCcccchhhHhhhcCcCcccccc
Q 036712 364 YKVARVCDGCGLFRPCKL-KRMKGLVSETQFLCKHCSKLQKSEQYCGICK 412 (1020)
Q Consensus 364 ~~~~~~C~~Cg~~~p~k~-~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~ 412 (1020)
+..+.+|..|+..+.... -. .++..+|..|+...- +..|..|+
T Consensus 31 H~~CF~C~~C~~~L~~~~~~~-----~~g~~yC~~cy~~~f-~~~c~~c~ 74 (192)
T 1b8t_A 31 HKSCFLCMVCKKNLDSTTVAV-----HGDEIYCKSCYGKKY-GPKGKGKG 74 (192)
T ss_dssp CTTTCBCTTTCCBCCSSSEEE-----ETTEEEEHHHHHHHH-SCCCCCCC
T ss_pred cCCCCcCcccCCcCCCCeeEe-----cCCEeeChhhhHhhc-Cccccccc
Confidence 789999999999988765 21 236899999997543 33344343
No 245
>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}
Probab=37.31 E-value=18 Score=31.39 Aligned_cols=37 Identities=19% Similarity=0.363 Sum_probs=23.8
Q ss_pred cCccccCCCCCcCCCCccccccccccCcccchhhHhhhcC
Q 036712 365 KVARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKS 404 (1020)
Q Consensus 365 ~~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~ 404 (1020)
+....|..||++...-| ++...... .||+.|+..+++
T Consensus 6 ~~~~~C~nC~tt~Tp~W--Rrg~~~~g-~LCNACGl~~~~ 42 (71)
T 2kae_A 6 KKSFQCSNCSVTETIRW--RNIRSKEG-IQCNACFIYQRK 42 (71)
T ss_dssp --CCCCSSSCCSCCSSC--CCCSSSSC-CCSSHHHHHHHH
T ss_pred CCCCcCCccCCCCCCcc--ccCCCCCC-ccchHHHHHHHH
Confidence 45678999999854433 22112223 899999998875
No 246
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=36.15 E-value=40 Score=27.64 Aligned_cols=55 Identities=16% Similarity=0.140 Sum_probs=37.7
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccc
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPF 290 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py 290 (1020)
..|++||+|-||...---|-+|+|..-. + ..+.+-|+|.++. |..-|....|.|.
T Consensus 2 ~~~~~G~~c~A~~s~Dg~wYrA~I~~i~---~-------~~~~~~V~f~DYG------n~e~v~~~~Lr~~ 56 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSEDGCIYPATIASID---F-------KRETCVVVYTGYG------NREEQNLSDLLSP 56 (59)
T ss_dssp CCCCTTCEEEEECTTTSCEEEEEEEEEE---T-------TTTEEEEEETTTT------EEEEEEGGGCBCT
T ss_pred CcCCcCCEEEEEECCCCCEEEEEEEEEc---C-------CCCEEEEEEEcCC------CEEEEcHHHeeCC
Confidence 3689999999998312358999996542 1 1357899998733 3456666667664
No 247
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=35.84 E-value=41 Score=29.32 Aligned_cols=59 Identities=17% Similarity=0.034 Sum_probs=43.5
Q ss_pred CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 219 ~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
+..+++||+|-||...---|.+|+|..-. +. .+.+-|+|.. -.|..-|....|.|....
T Consensus 7 ~~~~~~G~~c~A~~s~Dg~wYRA~I~~i~---~~-------~~~~~V~fiD------YGN~e~V~~~~Lr~l~~~ 65 (78)
T 2d9t_A 7 GKVWKPGDECFALYWEDNKFYRAEVEALH---SS-------GMTAVVKFTD------YGNYEEVLLSNIKPVQTE 65 (78)
T ss_dssp CCCCCTTCEEEEECTTTCCEEEEEEEEEC---SS-------SSEEEEEETT------TTEEEEEEGGGEEECCCC
T ss_pred ccCCCcCCEEEEEECCCCCEEEEEEEEEe---CC-------CCEEEEEEEc------CCCeEEEcHHHeEeCCHH
Confidence 45789999999998212359999997542 11 3578899987 445788999999998654
No 248
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=35.67 E-value=17 Score=28.80 Aligned_cols=32 Identities=25% Similarity=0.652 Sum_probs=24.0
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
.+-.+|.+|++..- ..++|..|+.-+|.+|..
T Consensus 12 ~~pt~C~~C~~~l~-----qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 12 LKLAFCDICQKFLL-----NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp SSCEECTTSSSEEC-----SEEECTTTTCCBCSTTSS
T ss_pred CCCcCCCCcccccc-----cCCEeCCCCCeEChhHHh
Confidence 44566777766432 578999999999999965
No 249
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=35.58 E-value=29 Score=28.97 Aligned_cols=37 Identities=27% Similarity=0.623 Sum_probs=27.4
Q ss_pred hcCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 402 QKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 402 ~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
+.+-.+|..|.+.. ..-.....+|..|+.-+|.+|..
T Consensus 20 ~~~pt~C~~C~~~l-~Gl~~qg~~C~~C~~~~Hk~C~~ 56 (65)
T 2enz_A 20 YKSPTFCEHCGTLL-WGLARQGLKCDACGMNVHHRCQT 56 (65)
T ss_dssp CCSCCBCSSSCCBC-CCSSSCSEEESSSCCEECTTTTT
T ss_pred CCCCcCchhcChhh-eecCCcccccCCCCCccCHhHHh
Confidence 55677888887643 11235778999999999999964
No 250
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=35.57 E-value=13 Score=32.62 Aligned_cols=48 Identities=29% Similarity=0.472 Sum_probs=31.4
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
...|+||...+.+- |.-..|.|-|+..|..-.- . ....+.||.|+...
T Consensus 13 ~~~C~IC~~~~~~p-----~~~~~CgH~fC~~Ci~~~~---~--~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 13 ELLCLICKDIMTDA-----VVIPCCGNSYCDECIRTAL---L--ESDEHTCPTCHQND 60 (92)
T ss_dssp TTEETTTTEECSSC-----EECTTTCCEECHHHHHHHH---H--HCTTCCCTTTCCSS
T ss_pred CCCCCCCChhhcCc-----eECCCCCCHHHHHHHHHHH---H--hcCCCcCcCCCCcC
Confidence 45688998877532 3334499999999963221 1 12348999999653
No 251
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=35.33 E-value=13 Score=41.66 Aligned_cols=33 Identities=24% Similarity=0.553 Sum_probs=25.0
Q ss_pred cccccccccCccC-CCCcEEEcC--CCCchhcCccc
Q 036712 592 TERCAICRWVEDW-DYNKIIICN--RCQIAVHQECY 624 (1020)
Q Consensus 592 d~~C~VC~~~e~~-~~n~Ll~Cd--~C~~~vH~~CY 624 (1020)
...|+||...... +.-+-..|+ .|+..||..|.
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL 343 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCL 343 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGG
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHH
Confidence 4589999987543 222346798 89999999997
No 252
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=35.28 E-value=26 Score=32.82 Aligned_cols=75 Identities=17% Similarity=0.283 Sum_probs=46.9
Q ss_pred ccCccccCCCCCcCCC--CccccccccccCcccchhhHhhhc-CcCccccccccccCCCCCCceecCCCCcEEcCccccc
Q 036712 364 YKVARVCDGCGLFRPC--KLKRMKGLVSETQFLCKHCSKLQK-SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEI 440 (1020)
Q Consensus 364 ~~~~~~C~~Cg~~~p~--k~~~~~~~~~~~~~lC~~C~~l~~-~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~ 440 (1020)
+..+.+|..|+..+.. ..= ...++..+|..|+.... ....|..|++.....+ ..|.- =++-+|.+|
T Consensus 26 H~~CF~C~~C~~~L~~~~~~~----~~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~~~e--~~~~a--~~~~~H~~C--- 94 (131)
T 2xjy_A 26 HEDCLSCDLCGCRLGEVGRRL----YYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAYE--MTMRV--KDKVYHLEC--- 94 (131)
T ss_dssp ETTTCBCTTTCCBCSSTTCCE----EEETTEEECHHHHHHHHCCCEECTTTCCEECTTS--EEEEE--TTEEEEGGG---
T ss_pred cHHHcccCcCCCccccCCCeE----EEECCEEeecCchhhhCCCccChhhcCCccCccc--eeEee--CCceECccC---
Confidence 7899999999998853 330 11236899999987543 2237888887654322 11111 234556666
Q ss_pred chhhhcccCCCceeCCCcCcc
Q 036712 441 SGKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 441 ~~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
|.|..|...
T Consensus 95 ------------F~C~~C~~~ 103 (131)
T 2xjy_A 95 ------------FKCAACQKH 103 (131)
T ss_dssp ------------CBCTTTCCB
T ss_pred ------------cccCCCCCC
Confidence 778888743
No 253
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=34.63 E-value=18 Score=28.34 Aligned_cols=37 Identities=24% Similarity=0.582 Sum_probs=26.2
Q ss_pred hcCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 402 QKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 402 ~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
+.+-.+|..|++.. ..-.....+|..|+.-+|.+|..
T Consensus 8 ~~~pt~C~~C~~~l-~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 8 YMSPTFCDHCGSLL-WGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp CSSCCBCTTTCCBC-CSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCCCCcCCCCcee-eccCCccCEeCCCCCeECHHHhh
Confidence 34556777776643 11235789999999999999964
No 254
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=34.11 E-value=9.2 Score=34.00 Aligned_cols=37 Identities=19% Similarity=0.398 Sum_probs=28.7
Q ss_pred cccCCCCCcCCCCccccccccccCcccchhhHhhhcCcCccccccc
Q 036712 368 RVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKSEQYCGICKN 413 (1020)
Q Consensus 368 ~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~g~~C~iC~k 413 (1020)
+.|..|+..+.- .+.+..|..|.+-|...-|||-|++
T Consensus 3 ~~CP~C~~~l~~---------~~~~~~C~~C~~~~~~~afCPeCgq 39 (81)
T 2jrp_A 3 ITCPVCHHALER---------NGDTAHCETCAKDFSLQALCPDCRQ 39 (81)
T ss_dssp CCCSSSCSCCEE---------CSSEEECTTTCCEEEEEEECSSSCS
T ss_pred CCCCCCCCcccc---------CCCceECccccccCCCcccCcchhh
Confidence 468888876432 2246679999999999999999976
No 255
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.03 E-value=16 Score=30.93 Aligned_cols=51 Identities=14% Similarity=0.333 Sum_probs=31.0
Q ss_pred CCCcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCCCC
Q 036712 589 KWTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEMPN 644 (1020)
Q Consensus 589 ~~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~~~ 644 (1020)
...+..|.||...-.. ...+..-.|+-.||..|...-.. ....|+.|+...
T Consensus 20 ~~~~~~C~IC~~~~~~--~~~~~~l~C~H~fh~~Ci~~w~~---~~~~CP~Cr~~~ 70 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFES--RQLLRVLPCNHEFHAKCVDKWLK---ANRTCPICRADS 70 (75)
T ss_dssp SSSCCEETTTTEECCB--TCEEEEETTTEEEETTHHHHHHH---HCSSCTTTCCCC
T ss_pred cCCCCCCeECCcccCC--CCeEEEECCCCHhHHHHHHHHHH---cCCcCcCcCCcC
Confidence 3456789999975322 22334445999999999722111 113699997654
No 256
>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*
Probab=33.95 E-value=15 Score=31.37 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=24.4
Q ss_pred CccccCCCCCcCCCCccccccccccCcccchhhHhhhcC
Q 036712 366 VARVCDGCGLFRPCKLKRMKGLVSETQFLCKHCSKLQKS 404 (1020)
Q Consensus 366 ~~~~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~l~~~ 404 (1020)
....|..||++...-+ ++.. .+ ..||+.|+..+++
T Consensus 8 ~~~~C~~C~t~~Tp~W--R~gp-~G-~~LCNaCGl~~~~ 42 (66)
T 4gat_A 8 GPTTCTNCFTQTTPLW--RRNP-EG-QPLCNACGLFLKL 42 (66)
T ss_dssp SSCCCTTTCCCCCSSC--EEET-TT-EEECHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCcC--CcCC-CC-CCccHHHHHHHHH
Confidence 4678999998754443 2332 33 4999999998864
No 257
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.09 E-value=33 Score=30.29 Aligned_cols=37 Identities=24% Similarity=0.512 Sum_probs=27.5
Q ss_pred hcCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 402 QKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 402 ~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
|.+-.||..|.+.. .--....++|..|+.-+|.+|..
T Consensus 25 ~~~pt~C~~C~~~l-~Gl~kqG~~C~~C~~~~Hk~C~~ 61 (85)
T 2eli_A 25 YGSPTFCDHCGSLL-YGLIHQGMKCDTCDMNVHKQCVI 61 (85)
T ss_dssp CSSCCBCSSSCCBC-CCSSSCEEECSSSCCEEETTTTT
T ss_pred CCCCcCCcccCccc-cccccCCCcCCCcCCccCHhHHh
Confidence 55677888887643 11235789999999999999954
No 258
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=32.65 E-value=25 Score=32.56 Aligned_cols=47 Identities=26% Similarity=0.557 Sum_probs=32.4
Q ss_pred hcCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 402 QKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 402 ~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
......|+||...+.+- |.-..|.|-|+..|..-. + ...||.|+...
T Consensus 19 l~~~~~C~IC~~~~~~p-----v~~~~CgH~fC~~Ci~~~------~---~~~CP~Cr~~~ 65 (117)
T 1jm7_B 19 LEKLLRCSRCTNILREP-----VCLGGCEHIFCSNCVSDC------I---GTGCPVCYTPA 65 (117)
T ss_dssp HHHTTSCSSSCSCCSSC-----BCCCSSSCCBCTTTGGGG------T---TTBCSSSCCBC
T ss_pred chhCCCCCCCChHhhCc-----cEeCCCCCHHHHHHHHHH------h---cCCCcCCCCcC
Confidence 34567899998877442 333379999999995322 1 17899999654
No 259
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=32.24 E-value=29 Score=33.44 Aligned_cols=57 Identities=18% Similarity=0.106 Sum_probs=35.7
Q ss_pred CCCCCCCEEEEeeCCC-----CCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhc
Q 036712 220 EDFALGDLVWAKCGRS-----YPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEF 293 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~-----~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~ 293 (1020)
.+|..||-|=|=. +. .-||+|+|..-. .+.+.|.|-|+.+ +.+ -||..++|-|=..+
T Consensus 59 ~~f~~gd~VEV~~-~~~d~ep~gWw~a~I~~~k------------g~f~~V~y~~~~~---~~~-EiV~~~rlR~~n~~ 120 (128)
T 3h8z_A 59 KEITEGDEVEVYS-RANEQEPCGWWLARVRMMK------------GDFYVIEYAACDA---TYN-EIVTLERLRPVNPN 120 (128)
T ss_dssp -CCCTTCEEEEEE-CC---CCCEEEEEEEEEEE------------TTEEEEEETTC-------C-EEECGGGEEECCCC
T ss_pred cCCCCCCEEEEEe-cCCCCCcCccEEEEEEEee------------CCEEEEEEcCCCC---Ccc-eEEehhheEeCCCC
Confidence 3689999875554 22 149999995432 3457777777554 344 78888888776443
No 260
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=32.17 E-value=45 Score=27.82 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=39.9
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchh
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAE 292 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e 292 (1020)
..+++||+|-||...---|-+|+|..-. + ..+.+-|+|-++. +-..|....|.|-.|
T Consensus 7 ~~~~vGd~c~A~~s~Dg~wYrA~I~~v~---~-------~~~~~~V~fvdYG------n~e~V~~~~Lrpl~~ 63 (64)
T 4a4f_A 7 HSWKVGDKCMAVWSEDGQCYEAEIEEID---E-------ENGTAAITFAGYG------NAEVTPLLNLKPVEE 63 (64)
T ss_dssp SCCCTTCEEEEECTTTSSEEEEEEEEEE---T-------TTTEEEEEETTTT------EEEEEEGGGEECCSC
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEEc---C-------CCCEEEEEEEecC------CEEEEeHHHcEeCCC
Confidence 4689999999998222358899996532 1 1256889998743 346788888888655
No 261
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=31.96 E-value=9 Score=35.66 Aligned_cols=47 Identities=21% Similarity=0.215 Sum_probs=31.0
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
....|+||...+.+ -+.. .|.+.|+..|....- ......||.|+...
T Consensus 17 ~~~~C~IC~~~~~~-----p~~~-~CgH~fC~~Ci~~~~------~~~~~~CP~Cr~~~ 63 (118)
T 3hct_A 17 SKYECPICLMALRE-----AVQT-PCGHRFCKACIIKSI------RDAGHKCPVDNEIL 63 (118)
T ss_dssp GGGBCTTTCSBCSS-----EEEC-TTSCEEEHHHHHHHH------HHHCSBCTTTCCBC
T ss_pred CCCCCCcCChhhcC-----eEEC-CcCChhhHHHHHHHH------hhCCCCCCCCCCCc
Confidence 34578999877643 2444 699999999963221 11224999999653
No 262
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=31.78 E-value=24 Score=29.67 Aligned_cols=38 Identities=21% Similarity=0.564 Sum_probs=27.3
Q ss_pred hhcCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 401 LQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 401 l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
.|.+-.+|..|.+.. .--....++|..|+.-+|.+|..
T Consensus 20 ~~~~pt~C~~C~~~l-~Gl~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 20 TATTPTYCYECEGLL-WGIARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp ECSSCCCCTTTCCCC-CSSCCEEEEETTTCCEECTTHHH
T ss_pred eCCCCcChhhcChhh-cccCcceeEcCCCCCeeCHHHHh
Confidence 355677888887643 11134678999999999999954
No 263
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=31.76 E-value=33 Score=34.76 Aligned_cols=61 Identities=11% Similarity=0.199 Sum_probs=37.4
Q ss_pred cccCccCCCCcEEEcCCCCchhcCcccCCcc---cC--CCCceeeccCCCCCcccccCcCCcccCCCcEEEEE
Q 036712 598 CRWVEDWDYNKIIICNRCQIAVHQECYGVTD---VQ--DFTSWVCRACEMPNAERKWGALKPTDVQTLWVHVT 665 (1020)
Q Consensus 598 C~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~---~p--~~~~W~C~~C~~~~~~~~gGaLk~t~i~~~WvHv~ 665 (1020)
|+....+ +-.+++|.+|...||..|..... +| ....+.|..|..+... -+++. +-.|+|+.
T Consensus 10 CG~~~~~-~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g~E----~f~R~--~~~w~~v~ 75 (177)
T 3rsn_A 10 EENGRQL-GEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNT----YFLRK--QANLKEMC 75 (177)
T ss_dssp -CTTCCT-TSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTSSC----EEEEC--CCCHHHHH
T ss_pred cCCCCCC-CceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCCcc----eeEec--cCCHHHHH
Confidence 4544344 34799999999999999996432 22 1245889999752211 23333 34577764
No 264
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=31.49 E-value=59 Score=28.93 Aligned_cols=62 Identities=19% Similarity=0.103 Sum_probs=44.7
Q ss_pred CCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhccccc
Q 036712 219 PEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKC 297 (1020)
Q Consensus 219 ~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~ 297 (1020)
+..+++||+|=|+....--|..|+|..-. + .+.+-|+|.. -.++..|....|.|-.+..-.+
T Consensus 25 ~~~~~~G~~c~a~~~~d~~wyRA~I~~~~---~--------~~~~~V~fvD------yGn~e~v~~~~lr~l~~~f~~l 86 (94)
T 3fdr_A 25 DLTVHVGDIVAAPLPTNGSWYRARVLGTL---E--------NGNLDLYFVD------FGDNGDCPLKDLRALRSDFLSL 86 (94)
T ss_dssp CCCCCTTCEEEEEETTTTEEEEEEEEEEC---T--------TSCEEEEETT------TCCEEEECGGGCEECCGGGGCS
T ss_pred CCCCCCCCEEEEEECCCCeEEEEEEEEEC---C--------CCeEEEEEEc------CCCeEEEEHHHhhhcCHHHhcC
Confidence 45688999999997223459999997643 1 2467888887 4457889999999887654444
No 265
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.40 E-value=36 Score=29.40 Aligned_cols=41 Identities=17% Similarity=0.284 Sum_probs=24.4
Q ss_pred cCccccCCCCCcC-CCCc----cccccccccCcccchhhHhhhcCcCcc
Q 036712 365 KVARVCDGCGLFR-PCKL----KRMKGLVSETQFLCKHCSKLQKSEQYC 408 (1020)
Q Consensus 365 ~~~~~C~~Cg~~~-p~k~----~~~~~~~~~~~~lC~~C~~l~~~g~~C 408 (1020)
.....|..|+... +... .+.+|. +=+.|..|.+.+..+.|+
T Consensus 13 ~~~~~C~~C~~~I~~~e~v~a~~~~wH~---~CF~C~~C~~~L~~~~~~ 58 (82)
T 2co8_A 13 GAGDLCALCGEHLYVLERLCVNGHFFHR---SCFRCHTCEATLWPGGYE 58 (82)
T ss_dssp CSSCBCSSSCCBCCTTTBCCBTTBCCBT---TTCBCSSSCCBCCTTSEE
T ss_pred CCCCCCcccCCCcccceEEEECCCeeCC---CcCEEcCCCCCcCCCcee
Confidence 3556788888766 3322 222222 456788887777666665
No 266
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=31.30 E-value=17 Score=37.28 Aligned_cols=52 Identities=17% Similarity=0.399 Sum_probs=37.4
Q ss_pred cCccccCCCCCcCCCCc-ccccccccc---CcccchhhHh--------------hhc-Cc-----Ccccccccccc
Q 036712 365 KVARVCDGCGLFRPCKL-KRMKGLVSE---TQFLCKHCSK--------------LQK-SE-----QYCGICKNIWH 416 (1020)
Q Consensus 365 ~~~~~C~~Cg~~~p~k~-~~~~~~~~~---~~~lC~~C~~--------------l~~-~g-----~~C~iC~k~y~ 416 (1020)
.....|..||..+|... .+.+....+ -.+.|..|.+ |++ .+ .-|+||++...
T Consensus 73 ~G~K~C~~Cg~~Kp~seF~rnkt~~DG~~~l~s~CkeC~~~lr~YGIT~eey~~L~e~Qg~~~~~G~C~ICg~~~~ 148 (200)
T 3gox_A 73 YDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSSTEKKKMDEIAPPKGSVFTCPICEKRSI 148 (200)
T ss_dssp SSEEECTTTCBEEEGGGSCEEEECTTSCEEECSSCHHHHHHHHCSCCCHHHHHHHHTTCCCTTCEEECTTTCCEEE
T ss_pred CCCeECCCCCCCcchhhhcccccCCCCCcccCccChhhhhccCCcCCCHHHHHHHHHHcccCCCCCcCcCCCCCCC
Confidence 46788999999998776 555544456 6789999975 222 34 57999988554
No 267
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=31.28 E-value=17 Score=30.06 Aligned_cols=33 Identities=21% Similarity=0.585 Sum_probs=23.5
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
..-.+|..|++.. ....++|..|+.-+|.+|..
T Consensus 20 ~~pt~C~~C~~~i----~kqg~kC~~C~~~cH~kC~~ 52 (59)
T 1rfh_A 20 GGPGWCDLCGREV----LRQALRCANCKFTCHSECRS 52 (59)
T ss_dssp SCCEECTTTCSEE----CSCCEECTTTSCEECHHHHT
T ss_pred CCCeEchhcchhh----hhCccEeCCCCCeEehhhhh
Confidence 3445555555443 35689999999999999954
No 268
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=31.24 E-value=30 Score=29.57 Aligned_cols=13 Identities=31% Similarity=0.802 Sum_probs=9.7
Q ss_pred CceeCCCcCcccc
Q 036712 451 IDYYCPNCRVKFK 463 (1020)
Q Consensus 451 ~~Y~Cp~C~~~~~ 463 (1020)
..|.|+.|...+.
T Consensus 64 ~~~~C~~C~~~f~ 76 (95)
T 2yt9_A 64 KPYICQSCGKGFS 76 (95)
T ss_dssp SSBCCSSSCCCBS
T ss_pred CceECCCccchhC
Confidence 5699999986554
No 269
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=30.06 E-value=13 Score=34.37 Aligned_cols=49 Identities=27% Similarity=0.445 Sum_probs=33.1
Q ss_pred cCcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCcccc
Q 036712 403 KSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFK 463 (1020)
Q Consensus 403 ~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~ 463 (1020)
.....|+||...+.+ -+. -.|.+.||..|..-.-. .....||.|+....
T Consensus 21 ~~~~~C~IC~~~~~~-----p~~-~~CgH~fC~~Ci~~~~~------~~~~~CP~Cr~~~~ 69 (116)
T 1rmd_A 21 VKSISCQICEHILAD-----PVE-TSCKHLFCRICILRCLK------VMGSYCPSCRYPCF 69 (116)
T ss_dssp HHHTBCTTTCSBCSS-----EEE-CTTSCEEEHHHHHHHHH------HTCSBCTTTCCBCC
T ss_pred cCCCCCCCCCcHhcC-----cEE-cCCCCcccHHHHHHHHh------HCcCcCCCCCCCCC
Confidence 345679999877643 344 48999999999632211 12468999996543
No 270
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.05 E-value=33 Score=30.10 Aligned_cols=38 Identities=21% Similarity=0.561 Sum_probs=28.2
Q ss_pred hhcCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 401 LQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 401 l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
.|..-.||.+|.+..- .-....++|..|+.-+|.+|..
T Consensus 24 ~~~~pt~C~~C~~~lw-Gl~kqg~~C~~C~~~~Hk~C~~ 61 (83)
T 2yuu_A 24 FFGQPTFCSVCKDFVW-GLNKQGYKCRQCNAAIHKKCID 61 (83)
T ss_dssp CCSSCCCCSSSCCCCC-SSSCCEEEETTTCCEECTTGGG
T ss_pred eCCCCcChhhcChhhc-cccccccccCCcCCeeChhhhh
Confidence 3567788888876431 1135789999999999999953
No 271
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=29.52 E-value=16 Score=38.74 Aligned_cols=31 Identities=26% Similarity=0.608 Sum_probs=26.1
Q ss_pred ccccccccCCCceeeecCCcccccccccccc
Q 036712 696 LKSCIICKQTHGSCTQCCKCATYFHAMCASR 726 (1020)
Q Consensus 696 ~~~C~iC~~~~Ga~IqC~~C~~~FHv~CAr~ 726 (1020)
...|.+|+....--+.|.+|...||..|...
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~ 210 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAK 210 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHH
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHH
Confidence 4679999986555689999999999999854
No 272
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=29.04 E-value=18 Score=43.69 Aligned_cols=31 Identities=23% Similarity=0.510 Sum_probs=23.5
Q ss_pred cccccccCC-Cc---eeeecCCccccccccccccC
Q 036712 697 KSCIICKQT-HG---SCTQCCKCATYFHAMCASRA 727 (1020)
Q Consensus 697 ~~C~iC~~~-~G---a~IqC~~C~~~FHv~CAr~a 727 (1020)
..|.+|+.. .| --.+|..|...+|..|+...
T Consensus 114 ~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v 148 (674)
T 3pfq_A 114 TFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNV 148 (674)
T ss_dssp CCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSS
T ss_pred CCCCccccccchhhcCccccccCCcchhhhhhhcc
Confidence 579999764 22 24689999999999998554
No 273
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=28.90 E-value=32 Score=33.31 Aligned_cols=53 Identities=21% Similarity=0.477 Sum_probs=40.0
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCcccCCcc-cCCCCceeeccCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTD-VQDFTSWVCRACEM 642 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~-~p~~~~W~C~~C~~ 642 (1020)
.+...|.+|...-..-.|.=..|..|...|=+.|-+... .+....|+|..|..
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k 106 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLE 106 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHH
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHH
Confidence 466889999986544445668999999999999976542 23446799999974
No 274
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=28.86 E-value=11 Score=37.51 Aligned_cols=47 Identities=23% Similarity=0.598 Sum_probs=36.6
Q ss_pred CcccccccccCccCCCCcEEEcC--CCCchhcCccc----CCc---ccCCCCceeeccCCC
Q 036712 591 TTERCAICRWVEDWDYNKIIICN--RCQIAVHQECY----GVT---DVQDFTSWVCRACEM 642 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~~~n~Ll~Cd--~C~~~vH~~CY----gv~---~~p~~~~W~C~~C~~ 642 (1020)
.+..|.+|.++ +.|+.|+ .|..+|=..|. |.. .+.....|.|=.|..
T Consensus 78 ~~~yC~wC~~G-----g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 78 YQSYCTICCGG-----REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp SBSSCTTTSCC-----SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred CcceeeEecCC-----CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 46789999986 5899999 79999999997 221 223347899999975
No 275
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=28.63 E-value=35 Score=29.19 Aligned_cols=14 Identities=14% Similarity=0.425 Sum_probs=10.2
Q ss_pred CCceeCCCcCcccc
Q 036712 450 HIDYYCPNCRVKFK 463 (1020)
Q Consensus 450 ~~~Y~Cp~C~~~~~ 463 (1020)
...|.|+.|...+.
T Consensus 62 ~~~~~C~~C~~~f~ 75 (96)
T 2dmd_A 62 ERPFKCQICPYASR 75 (96)
T ss_dssp CCCEECSSSSCEES
T ss_pred CCCccCCCCCCccC
Confidence 45599999987654
No 276
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.42 E-value=46 Score=29.90 Aligned_cols=60 Identities=12% Similarity=0.044 Sum_probs=43.6
Q ss_pred cCCCCCCCCCEEEEeeC---CCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccc
Q 036712 217 YKPEDFALGDLVWAKCG---RSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLF 288 (1020)
Q Consensus 217 ~~~~~~~~gd~VwaK~g---k~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~ 288 (1020)
.....|.+|+.|+|..+ +.--|-+|+|++-. . ......|.|-|-|+.. .-| -||..++|-
T Consensus 5 ~~~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~-~-------~~~~~~YyVHY~g~Nk---RlD-EWV~~~rl~ 67 (87)
T 2eko_A 5 SSGGEIIEGCRLPVLRRNQDNEDEWPLAEILSVK-D-------ISGRKLFYVHYIDFNR---RLD-EWVTHERLD 67 (87)
T ss_dssp CSSCSCCTTCEEEBCEECTTCCEECCEEEEEEEC-C-------SSSCCCEEEEECSSCS---CCC-EEECTTTBC
T ss_pred cccccccCCCEEEEEEcccCCCCeEEEEEEEEEE-E-------cCCCcEEEEEeCCCCc---ccc-cccCHhHcc
Confidence 34578999999999973 23457789997754 1 1124579999999665 345 899999984
No 277
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=28.15 E-value=29 Score=33.51 Aligned_cols=57 Identities=18% Similarity=0.263 Sum_probs=42.0
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCcc
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGML 287 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i 287 (1020)
..|.+|+.|+++.| .--|.+|+|++-. ..+. .....|.|-|-|+.. .-| -||..++|
T Consensus 11 ~~~~vGe~v~~~~~-d~~~y~AkIl~i~-~~~~-----~~~~~YyVHY~gwNk---R~D-EWV~~~ri 67 (133)
T 1wgs_A 11 VTVEIGETYLCRRP-DSTWHSAEVIQSR-VNDQ-----EGREEFYVHYVGFNR---RLD-EWVDKNRL 67 (133)
T ss_dssp CCCCTTSEEEEEET-TTEEEEEEEEEEE-EETT-----TTEEEEEEECTTTCS---SCC-EEECTTTS
T ss_pred cccCCCCEEEEEeC-CCCEEEEEEEEEE-eccC-----CCceEEEEeccCcCC---Cce-eecChhhc
Confidence 46999999999995 2358899998753 1111 123479999999776 566 99999998
No 278
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=27.51 E-value=21 Score=30.93 Aligned_cols=27 Identities=19% Similarity=0.436 Sum_probs=21.1
Q ss_pred cccccccccCCCCCCceecCCCCcEEcCc
Q 036712 408 CGICKNIWHHSDSGNWVCCDGCNVWVHAE 436 (1020)
Q Consensus 408 C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~ 436 (1020)
|| |+..|-.+++.+|.+|- |..-++.+
T Consensus 7 C~-C~~~~~~~~~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 7 CD-CGRALYSREGAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp ET-TSCCEEEETTCSEEEET-TTEEEECC
T ss_pred CC-CCCEEEEcCCCcEEECC-CCCeeeec
Confidence 77 88877777788888886 88877654
No 279
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=27.37 E-value=34 Score=39.05 Aligned_cols=22 Identities=23% Similarity=0.502 Sum_probs=19.4
Q ss_pred CccEEEEccccCCCCEEEEEee
Q 036712 888 HGWGLFARRHIQEGEMVVEYRG 909 (1020)
Q Consensus 888 kG~GVfA~~~I~~Gt~I~EY~G 909 (1020)
.|+||+|+++|++|+.|+.---
T Consensus 32 ~GrGl~A~~~I~~ge~ll~IP~ 53 (440)
T 2h21_A 32 EGLGLVALKDISRNDVILQVPK 53 (440)
T ss_dssp TEEEEEESSCBCTTEEEEEEEG
T ss_pred CCCEEEEcccCCCCCEEEEeCh
Confidence 6999999999999999987543
No 280
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=26.92 E-value=28 Score=34.46 Aligned_cols=51 Identities=22% Similarity=0.513 Sum_probs=38.7
Q ss_pred CCcccccccccCccCCCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCC
Q 036712 590 WTTERCAICRWVEDWDYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 590 ~~d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~ 642 (1020)
.++..|.+|...-..-.|.=..|..|...|=..|-.. .+....|+|..|..
T Consensus 66 ~~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~--~~~~~~W~C~vC~k 116 (153)
T 2zet_C 66 LNETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHA--HPEEQGWLCDPCHL 116 (153)
T ss_dssp GGGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEEC--CSSSSSCEEHHHHH
T ss_pred CCCccchhhcCccccccCCCCcCCCCCchhhcccccc--cCCCCcEeeHHHHH
Confidence 3578899999864444566789999999999999732 23347899999974
No 281
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=26.90 E-value=36 Score=29.54 Aligned_cols=38 Identities=18% Similarity=0.535 Sum_probs=28.4
Q ss_pred hhcCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 401 LQKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 401 l~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
.|..-.||.+|.+..- .-....++|..|+.-+|..|..
T Consensus 30 ~f~~pt~C~~C~~~lw-Gl~kqG~~C~~C~~~~Hk~C~~ 67 (77)
T 2enn_A 30 FFPQPTFCSVCHEFVW-GLNKQGYQCRQCNAAIHKKCID 67 (77)
T ss_dssp CCSSCEECSSSCCEEC-CTTCCEEECSSSCCEEESGGGS
T ss_pred cCCCCcCccccChhhc-cccccccCcCCCCCcCCHhHHh
Confidence 3567788888877421 1135789999999999999954
No 282
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=26.75 E-value=86 Score=28.70 Aligned_cols=63 Identities=19% Similarity=0.107 Sum_probs=44.9
Q ss_pred CCCCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhccccc
Q 036712 218 KPEDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKC 297 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~ 297 (1020)
.+..+++||+|-|+...---|..|+|.... + .+.+-|+|-. -.++..|....|.|-.+....+
T Consensus 29 ~~~~~~~G~~c~a~~~~d~~wyRA~V~~~~---~--------~~~~~V~fvD------yGn~e~v~~~~Lr~l~~~f~~l 91 (110)
T 2diq_A 29 EDLTVHVGDIVAAPLPTNGSWYRARVLGTL---E--------NGNLDLYFVD------FGDNGDCPLKDLRALRSDFLSL 91 (110)
T ss_dssp CCCCCCTTCEEEECCTTTCSCEEEEECCCC---S--------SSCEEEEETT------TCCEEEECGGGCEECCHHHHSS
T ss_pred CCCCCCCCCEEEEEECCCCeEEEEEEEEEC---C--------CCeEEEEEEe------CCCeEEEehHHhhcCcHHHhCC
Confidence 356789999999998212459999997753 1 1467888876 4457888888898886543333
No 283
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=25.94 E-value=74 Score=28.50 Aligned_cols=44 Identities=20% Similarity=0.514 Sum_probs=31.8
Q ss_pred ccccCccCC----CCcEEEcCCCCc-hhcCcccCCcccCCCCceeeccCCC
Q 036712 597 ICRWVEDWD----YNKIIICNRCQI-AVHQECYGVTDVQDFTSWVCRACEM 642 (1020)
Q Consensus 597 VC~~~e~~~----~n~Ll~Cd~C~~-~vH~~CYgv~~~p~~~~W~C~~C~~ 642 (1020)
+|..+.... .-+|+.|..|+. ..|..|..+... ...|.|..|..
T Consensus 30 lc~~GR~~~~~~~~W~L~lC~~Cgs~gtH~~Cs~l~~~--~~~weC~~C~~ 78 (85)
T 1weq_A 30 LYEQGRDSFEDEGRWRLILCATCGSHGTHRDCSSLRPN--SKKWECNECLP 78 (85)
T ss_dssp CSTTCSSCCBSSSTTBCEECSSSCCCEECSGGGTCCTT--CSCCCCTTTSC
T ss_pred CCCCCcccccCCCCEEEEeCcccCCchhHHHHhCCcCC--CCCEECCcCcc
Confidence 454544433 358999999975 689999987543 36899999974
No 284
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=25.93 E-value=30 Score=28.83 Aligned_cols=37 Identities=24% Similarity=0.582 Sum_probs=26.4
Q ss_pred hcCcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 402 QKSEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 402 ~~~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
+.+-.+|..|++.. ..-.....+|..|+.-+|.+|..
T Consensus 17 ~~~pt~C~~C~~~l-~Gl~~qg~~C~~C~~~~Hk~C~~ 53 (65)
T 3uej_A 17 YMSPTFCDHCGSLL-WGLVKQGLKCEDCGMNVHHKCRE 53 (65)
T ss_dssp CSSCCBCTTTCCBC-CSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCCCcccccChhh-hccCceeeECCCCCCeEchhHhh
Confidence 44567777886642 11235678999999999999964
No 285
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.22 E-value=24 Score=30.92 Aligned_cols=18 Identities=33% Similarity=0.449 Sum_probs=15.2
Q ss_pred EEEEEccCCCCCCeEEEe
Q 036712 976 IVLIAKTNVSAGDELTYD 993 (1020)
Q Consensus 976 i~l~A~RdI~~GEELT~D 993 (1020)
-.|+|.|||++||-||-+
T Consensus 7 rslvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 7 GSVVAKVKIPEGTILTMD 24 (79)
T ss_dssp CEEEESSCBCTTCBCCGG
T ss_pred EEEEEeCccCCCCCcCHH
Confidence 358899999999999854
No 286
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=25.20 E-value=28 Score=29.07 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=25.4
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
+.-+|..|++.+. -+.....|-.|..-+|.+|-.
T Consensus 18 ~~~~C~~Cg~~i~--~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 18 KPESCVPCGKRIK--FGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp SCEECTTTCCEEC--TTCEEEEESSSSCEECGGGGG
T ss_pred CCcccccccCEEE--EeeEeeECCCCCCeEchhHhh
Confidence 4556777766553 356678999999999999954
No 287
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=25.01 E-value=37 Score=29.68 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=11.5
Q ss_pred ccCccccCCCCCcCCCCc
Q 036712 364 YKVARVCDGCGLFRPCKL 381 (1020)
Q Consensus 364 ~~~~~~C~~Cg~~~p~k~ 381 (1020)
.+....|..||.....+.
T Consensus 14 ~~~~~~C~~C~~~f~~~~ 31 (106)
T 2ee8_A 14 TKKEFICKFCGRHFTKSY 31 (106)
T ss_dssp CCCCCBCSSSCCBCSSHH
T ss_pred CCcCeECCCCCCccCCHH
Confidence 456677777777655444
No 288
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=24.60 E-value=75 Score=28.50 Aligned_cols=57 Identities=16% Similarity=0.105 Sum_probs=39.4
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchh
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAE 292 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e 292 (1020)
..|++||+|-||...---|-+|+|..-. + ..+.+-|+|.++.. -.=|....|.|...
T Consensus 9 ~~~kvGd~C~A~ys~Dg~wYrA~I~~i~---~-------~~~~~~V~fiDYGN------~E~V~~~~Lrp~~~ 65 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSEDGCIYPATIASID---F-------KRETCVVVYTGYGN------REEQNLSDLLSPIC 65 (88)
T ss_dssp CCCCSSCEEEEECTTTCCEEEEEEEEEE---T-------TTTEEEEEETTTCC------EEEEEGGGCBCCC-
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEec---C-------CCCEEEEEEecCCC------EEEEcHHHcccCCh
Confidence 4789999999999323469999996532 1 13578999988443 35567777888643
No 289
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=24.08 E-value=76 Score=26.39 Aligned_cols=53 Identities=13% Similarity=-0.066 Sum_probs=38.4
Q ss_pred CCCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccc
Q 036712 220 EDFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPF 290 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py 290 (1020)
..|..|+=|.|+. +-=...||.|+.-. + ....+.|+|+- +.-.|+.-..|.+-
T Consensus 2 ~~f~~GedVLarw-sDG~fYlGtI~~V~---~-------~~~~clV~F~D-------~s~~W~~~kdi~~~ 54 (58)
T 4hcz_A 2 PRLWEGQDVLARW-TDGLLYLGTIKKVD---S-------AREVCLVQFED-------DSQFLVLWKDISPA 54 (58)
T ss_dssp CSCCTTCEEEEEC-TTSCEEEEEEEEEE---T-------TTTEEEEEETT-------SCEEEEEGGGEEEC
T ss_pred CccccCCEEEEEe-cCCCEEeEEEEEEe---c-------CCCEEEEEEcC-------CCeEEEEhHHcccc
Confidence 3689999999999 34568899997642 0 13468888884 33489998888753
No 290
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=24.07 E-value=19 Score=34.07 Aligned_cols=50 Identities=24% Similarity=0.267 Sum_probs=0.9
Q ss_pred CcccccccccCccC-------------CCCcEEEcCCCCchhcCcccCCcccCCCCceeeccCCCC
Q 036712 591 TTERCAICRWVEDW-------------DYNKIIICNRCQIAVHQECYGVTDVQDFTSWVCRACEMP 643 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~-------------~~n~Ll~Cd~C~~~vH~~CYgv~~~p~~~~W~C~~C~~~ 643 (1020)
.++.|+||...-.. .++..+.-..|+-.||..|.-.-.. ..-.|+.|+..
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~---~~~~CP~Cr~~ 109 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK---TRQVCPLDNRE 109 (117)
T ss_dssp CC----------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHH---cCCcCCCCCCe
Confidence 35789999864221 1112223346888999999511100 12248888764
No 291
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.98 E-value=1e+02 Score=25.79 Aligned_cols=24 Identities=29% Similarity=0.719 Sum_probs=18.7
Q ss_pred ccCcccchhhHhhhcCcCccccccccc
Q 036712 389 SETQFLCKHCSKLQKSEQYCGICKNIW 415 (1020)
Q Consensus 389 ~~~~~lC~~C~~l~~~g~~C~iC~k~y 415 (1020)
.++..+|..|.... ..||+|++..
T Consensus 33 CgH~~~C~~C~~~~---~~CP~CR~~i 56 (68)
T 2ea5_A 33 CRHTCLCDGCVKYF---QQCPMCRQFV 56 (68)
T ss_dssp TTBCCSCTTHHHHC---SSCTTTCCCC
T ss_pred CCChhhhHHHHhcC---CCCCCCCcch
Confidence 44677999999854 6899998744
No 292
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=23.48 E-value=32 Score=30.79 Aligned_cols=32 Identities=25% Similarity=0.630 Sum_probs=23.2
Q ss_pred CccccccccccCCCCCCceecCC--CCcEEcCcccccc
Q 036712 406 QYCGICKNIWHHSDSGNWVCCDG--CNVWVHAECDEIS 441 (1020)
Q Consensus 406 ~~C~iC~k~y~~~d~~~wv~Cd~--C~~WvH~~C~~~~ 441 (1020)
.-|.||++ ...+--|||.. |...||..|-...
T Consensus 18 l~C~iC~~----~~~GAciqC~~~~C~~~fHv~CA~~a 51 (87)
T 2lq6_A 18 LTCYLCKQ----KGVGASIQCHKANCYTAFHVTCAQKA 51 (87)
T ss_dssp CCBTTTTB----CCSSCEEECSCTTTCCEEEHHHHHHH
T ss_pred CCCcCCCC----CCCcEeEecCCCCCCCcCcHHHHHHC
Confidence 34778864 12367899986 9999999996543
No 293
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=23.33 E-value=28 Score=31.47 Aligned_cols=55 Identities=24% Similarity=0.617 Sum_probs=37.6
Q ss_pred CcCccccccccccCC-CCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccccC
Q 036712 404 SEQYCGICKNIWHHS-DSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKFKF 464 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~-d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~~~ 464 (1020)
.+|.|-||+---..+ ++...|.|..|..=|=-.|-.- +..+..-.||.|+++...
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY------ErkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY------ERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH------HHHTSCSSCTTTCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHH------HHhccCccccccCCcccc
Confidence 367788887543333 4778899999988877777311 233556789999987763
No 294
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=23.29 E-value=50 Score=28.60 Aligned_cols=35 Identities=20% Similarity=0.451 Sum_probs=25.2
Q ss_pred cccccccccCccCCCCcEEEcCCCCchhcCcccCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNRCQIAVHQECYGV 626 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv 626 (1020)
...|.+|...=-.-...-+.|..|.+.+|..|...
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 35699997632111236689999999999999854
No 295
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=23.26 E-value=1.4e+02 Score=28.26 Aligned_cols=88 Identities=16% Similarity=0.123 Sum_probs=59.8
Q ss_pred CCCCCCCEEEEeeCC-CCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchhcccccC
Q 036712 220 EDFALGDLVWAKCGR-SYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAEFMDKCE 298 (1020)
Q Consensus 220 ~~~~~gd~VwaK~gk-~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e~~~~~~ 298 (1020)
.+-.+|-+|=+..+. +-.|-||.|+.|. +-+.+. . ..+.+.|.=|= ...|+=|-+..|.-+......
T Consensus 9 ~de~lGkVV~V~~~~kk~~WfPALVVsPs--~~d~v~-v-kKd~~LVRSFk------DgKf~sV~rkdv~e~~~~~~~-- 76 (117)
T 2yrv_A 9 NDELLGKVVSVVSATERTEWYPALVISPS--CNDDIT-V-KKDQCLVRSFI------DSKFYSIARKDIKEVDILNLP-- 76 (117)
T ss_dssp CCSSTTSEEEEECSSCSSCEEEEEEECCS--SCSSCC-C-CTTCEEEEESS------SCCEEEECTTTEECCCSTTSC--
T ss_pred CHHHcCcEEEEecCCCCCceeeeEEECCC--CCCCee-e-ccceEEEEeec------cCeEEEEEhHhhhhccccccc--
Confidence 344589999998854 4579999999996 333442 2 27899999997 445888888887766433221
Q ss_pred ccccccCChHHHHHHHHHHHH-hcCCcc
Q 036712 299 PTQLHKSKISGFQIALEEAVL-AENGFL 325 (1020)
Q Consensus 299 q~~~~~~k~~~f~~Aleea~~-ae~g~~ 325 (1020)
+. ....+.||+.|++ .+.|.+
T Consensus 77 -----k~-d~slK~a~d~A~~fl~~~~l 98 (117)
T 2yrv_A 77 -----ES-ELSTKPGLQKASIFLKTRVV 98 (117)
T ss_dssp -----HH-HHHHCHHHHHHHHHHHTCCC
T ss_pred -----cC-chhHHHHHHHHHHHHhcCCC
Confidence 11 2346789999966 666655
No 296
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=22.92 E-value=38 Score=26.45 Aligned_cols=33 Identities=24% Similarity=0.681 Sum_probs=24.8
Q ss_pred ccccccccCccCC-CCcEEEcCCCCchhcCcccCC
Q 036712 593 ERCAICRWVEDWD-YNKIIICNRCQIAVHQECYGV 626 (1020)
Q Consensus 593 ~~C~VC~~~e~~~-~n~Ll~Cd~C~~~vH~~CYgv 626 (1020)
..|.+|+..- +. ...-+.|..|++.+|..|...
T Consensus 12 t~C~~C~~~l-~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 12 TFCDHCGSLL-WGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CBCTTTCCBC-CSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCcCCCCcee-eccCCccCEeCCCCCeECHHHhhh
Confidence 5699997642 21 246789999999999999743
No 297
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=22.57 E-value=31 Score=30.77 Aligned_cols=23 Identities=13% Similarity=0.430 Sum_probs=18.0
Q ss_pred CCCCceecCCCCcEEcCcccccc
Q 036712 419 DSGNWVCCDGCNVWVHAECDEIS 441 (1020)
Q Consensus 419 d~~~wv~Cd~C~~WvH~~C~~~~ 441 (1020)
++...++|++|.-|+...=+...
T Consensus 41 ~ge~iv~C~sCSL~I~V~~~~~d 63 (83)
T 1yop_A 41 EGEKVAVCPSCSLMIDVVFDKED 63 (83)
T ss_dssp TTCCEEECSSSCCEEECBCCSSH
T ss_pred CCCEEEECCCCccEEEEEEcccc
Confidence 35679999999999988665533
No 298
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=22.50 E-value=44 Score=28.46 Aligned_cols=28 Identities=21% Similarity=0.367 Sum_probs=23.0
Q ss_pred CCCCCCCCCEEEEee-CCCCCCCCceecCC
Q 036712 218 KPEDFALGDLVWAKC-GRSYPAWPAVVIDP 246 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~-gk~~p~WPa~v~~p 246 (1020)
-+..|.+||.|-||. | .--+.||+|..-
T Consensus 9 p~~~f~vgd~VmaRW~G-d~~yYparItSi 37 (68)
T 2dig_A 9 PSRKFADGEVVRGRWPG-SSLYYEVEILSH 37 (68)
T ss_dssp CCCSSCSSCEEEEECTT-TCCEEEEEEEEE
T ss_pred CceEeecCCEEEEEccC-CccceEEEEEEe
Confidence 467899999999999 5 467889999654
No 299
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=22.46 E-value=50 Score=25.97 Aligned_cols=31 Identities=23% Similarity=0.518 Sum_probs=24.8
Q ss_pred cccccccccCccCCCCcEEEcCCCCchhcCcccCC
Q 036712 592 TERCAICRWVEDWDYNKIIICNRCQIAVHQECYGV 626 (1020)
Q Consensus 592 d~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv 626 (1020)
...|.+|+..- + .-+.|..|++.+|..|...
T Consensus 14 pt~C~~C~~~l-~---qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 14 LAFCDICQKFL-L---NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CEECTTSSSEE-C---SEEECTTTTCCBCSTTSSS
T ss_pred CcCCCCccccc-c---cCCEeCCCCCeEChhHHhh
Confidence 36799998742 2 5789999999999999754
No 300
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=22.26 E-value=21 Score=32.58 Aligned_cols=55 Identities=20% Similarity=0.227 Sum_probs=32.5
Q ss_pred CcccccccccCccC-------------CCCcEEEcCCCCchhcCcccCCcc--cCCCCceeeccCCCCCc
Q 036712 591 TTERCAICRWVEDW-------------DYNKIIICNRCQIAVHQECYGVTD--VQDFTSWVCRACEMPNA 645 (1020)
Q Consensus 591 ~d~~C~VC~~~e~~-------------~~n~Ll~Cd~C~~~vH~~CYgv~~--~p~~~~W~C~~C~~~~~ 645 (1020)
.++.|.||.+.-.. .....+.-..|+-.||..|...-. ......-.|+.|+....
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 45789999864321 112344456799999999972111 00013457999986543
No 301
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=22.13 E-value=45 Score=28.34 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=22.8
Q ss_pred CCCCCCCCCEEEEee-CCCCCCCCceecCC
Q 036712 218 KPEDFALGDLVWAKC-GRSYPAWPAVVIDP 246 (1020)
Q Consensus 218 ~~~~~~~gd~VwaK~-gk~~p~WPa~v~~p 246 (1020)
-+..|.+||.|-||. | .--+.||+|..-
T Consensus 6 p~~~~~vgd~VmaRW~G-d~~yYparI~Si 34 (66)
T 2l8d_A 6 PNRKYADGEVVMGRWPG-SVLYYEVQVTSY 34 (66)
T ss_dssp SSSSSCSSCEEEEECTT-SSCEEEEEEEEE
T ss_pred CceEeecCCEEEEEcCC-CccceEEEEEEe
Confidence 367899999999999 4 467889999654
No 302
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=21.54 E-value=41 Score=28.89 Aligned_cols=30 Identities=20% Similarity=0.270 Sum_probs=18.1
Q ss_pred ccccccccccCCCCCCceecCCCCcEEcCc
Q 036712 407 YCGICKNIWHHSDSGNWVCCDGCNVWVHAE 436 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~ 436 (1020)
-||+|+.--.-+.....+.|..|+.+|=..
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (69)
T 2pk7_A 10 ACPICKGPLKLSADKTELISKGAGLAYPIR 39 (69)
T ss_dssp CCTTTCCCCEECTTSSEEEETTTTEEEEEE
T ss_pred eCCCCCCcCeEeCCCCEEEcCCCCcEecCc
Confidence 467776544333445566777777776554
No 303
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=21.00 E-value=57 Score=27.16 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=24.6
Q ss_pred ccccccccCccCCCCcEEEcCCCCchhcCcccCC
Q 036712 593 ERCAICRWVEDWDYNKIIICNRCQIAVHQECYGV 626 (1020)
Q Consensus 593 ~~C~VC~~~e~~~~n~Ll~Cd~C~~~vH~~CYgv 626 (1020)
..|.+|...=-.-...-+.|..|.+.+|..|...
T Consensus 24 t~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 24 TFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred cCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 5699997642111235689999999999999754
No 304
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.91 E-value=61 Score=28.37 Aligned_cols=34 Identities=24% Similarity=0.742 Sum_probs=25.4
Q ss_pred cccccccccCccCC-CCcEEEcCCCCchhcCcccCC
Q 036712 592 TERCAICRWVEDWD-YNKIIICNRCQIAVHQECYGV 626 (1020)
Q Consensus 592 d~~C~VC~~~e~~~-~n~Ll~Cd~C~~~vH~~CYgv 626 (1020)
...|.+|...- +. ...-+.|..|.+.+|..|...
T Consensus 28 pt~C~~C~~~l-wGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 28 PTFCSVCKDFV-WGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CCCCSSSCCCC-CSSSCCEEEETTTCCEECTTGGGT
T ss_pred CcChhhcChhh-ccccccccccCCcCCeeChhhhhh
Confidence 35699997642 21 246789999999999999854
No 305
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=20.87 E-value=91 Score=27.11 Aligned_cols=56 Identities=20% Similarity=0.149 Sum_probs=37.5
Q ss_pred CCCCCCEEEEeeCCCCCCCCceecCCCCCCchhhhcccCCCeEEEEEecccCCCCCcceeeeecCccccchh
Q 036712 221 DFALGDLVWAKCGRSYPAWPAVVIDPILQAPEAVLRCCIPGCLCVMFFGYSKNGTQRDYGWVKQGMLFPFAE 292 (1020)
Q Consensus 221 ~~~~gd~VwaK~gk~~p~WPa~v~~p~~~~p~~~~~~~~~~~~~V~FfG~~~~~~~~dy~W~~~~~i~py~e 292 (1020)
.+++||+|-||...---|.+|+|..-. +. .+.+.|+|.++. +..-|....|.|...
T Consensus 17 ~~kvGd~C~A~ys~Dg~wYRA~I~~i~---~~-------~~~~~V~fvDYG------N~e~V~~~~Lr~l~~ 72 (77)
T 3pnw_C 17 MWKPGDECFALYWEDNKFYRAEVEALH---SS-------GMTAVVKFIDYG------NYEEVLLSNIKPIQT 72 (77)
T ss_dssp TCCTTCEEEEEETTTTEEEEEEEEEEC---TT-------SSEEEEEETTTC------CEEEEEGGGEECC--
T ss_pred CCCcCCEEEEEECCCCCEEEEEEEEEe---CC-------CCEEEEEEEcCC------CeEEEeHHHeEECCh
Confidence 689999999998323459999996532 11 246889988733 346677777777643
No 306
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=20.66 E-value=53 Score=26.28 Aligned_cols=29 Identities=31% Similarity=0.806 Sum_probs=21.5
Q ss_pred CccccccccccCCCCCCceecCCCCcEEcCcccc
Q 036712 406 QYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDE 439 (1020)
Q Consensus 406 ~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~ 439 (1020)
.+|..|++..- .+ ++|..|+.-+|.+|..
T Consensus 15 t~C~~C~k~i~---~G--~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSMI---FG--VKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSSC---CE--EEETTTTEEESSSCTT
T ss_pred cCccccCceeE---Cc--CCCCCCCCccchhhcC
Confidence 56666666542 12 7999999999999975
No 307
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=20.57 E-value=37 Score=29.06 Aligned_cols=30 Identities=20% Similarity=0.394 Sum_probs=17.3
Q ss_pred ccccccccccCCCCCCceecCCCCcEEcCc
Q 036712 407 YCGICKNIWHHSDSGNWVCCDGCNVWVHAE 436 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~ 436 (1020)
-||+|+.--.-+.....+.|..|+.+|=..
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (68)
T 2hf1_A 10 VCPLCKGPLVFDKSKDELICKGDRLAFPIK 39 (68)
T ss_dssp BCTTTCCBCEEETTTTEEEETTTTEEEEEE
T ss_pred ECCCCCCcCeEeCCCCEEEcCCCCcEecCC
Confidence 366666543333344566677777776544
No 308
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=20.46 E-value=47 Score=29.60 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=25.8
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCccc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECD 438 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~ 438 (1020)
+.+|-+|++.-.......-..|--|+.-||.+|-
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~ 71 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCK 71 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHH
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChhHHHHHH
Confidence 4688888886444444556789999999999994
No 309
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=20.40 E-value=47 Score=40.26 Aligned_cols=46 Identities=22% Similarity=0.318 Sum_probs=29.1
Q ss_pred CccccCCCCCcCCCCc----cccccccccCcccchhhHhhhc---------CcCcccccc
Q 036712 366 VARVCDGCGLFRPCKL----KRMKGLVSETQFLCKHCSKLQK---------SEQYCGICK 412 (1020)
Q Consensus 366 ~~~~C~~Cg~~~p~k~----~~~~~~~~~~~~lC~~C~~l~~---------~g~~C~iC~ 412 (1020)
.-+.|..||-|..=-- ++-..+|. .+.||..|.+-|+ .-+-||.|+
T Consensus 38 pF~nCt~CGPR~tii~~lPYDR~~TsM~-~F~mC~~C~~EY~dp~dRRfHAqp~aCp~CG 96 (657)
T 3ttc_A 38 PFINCTHCGPRFTIIRAMPYDRPFTVMA-AFPLCPACDKEYRDPLDRRFHAQPVACPECG 96 (657)
T ss_dssp TTCCBTTBBCSGGGBSSSSCSGGGBGGG-GSCCCHHHHHHHHCTTSTTTTCTTCCCTTTS
T ss_pred ccccCcCCCchHHhcccCCCCCCCCccc-CCCCChHHHHHhCCCCCCcCcCCCCcCcccC
Confidence 4567999996642211 44444443 4999999998765 345566664
No 310
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=20.38 E-value=58 Score=26.67 Aligned_cols=42 Identities=33% Similarity=0.740 Sum_probs=24.8
Q ss_pred cCccccccccccCCCCCCceecCCCCcEEcCcccccc-hhhhcccCCCceeCCCcCcc
Q 036712 405 EQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEIS-GKHFKDLEHIDYYCPNCRVK 461 (1020)
Q Consensus 405 g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~-~~~~~~l~~~~Y~Cp~C~~~ 461 (1020)
.--|.+|+-+|.+..+.. =.+|. ...+++| ..+|.||.|...
T Consensus 3 ~y~C~vCGyvYd~~~Gdp--------------~~gi~pGt~fe~l-P~dw~CP~Cg~~ 45 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDP--------------DDGVNPGTDFKDI-PDDWVCPLCGVG 45 (54)
T ss_dssp CEEETTTCCEECTTTCBG--------------GGTBCTTCCGGGS-CTTCBCTTTCCB
T ss_pred ceECCCCCeEECCCcCCc--------------ccCcCCCCChhHC-CCCCcCcCCCCc
Confidence 345888888887653211 01222 2245566 456999999964
No 311
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=20.27 E-value=42 Score=30.66 Aligned_cols=41 Identities=27% Similarity=0.539 Sum_probs=27.2
Q ss_pred ccCCCCCcCCCCccccccccccCcccchhhHh-hhcCcCccccccccc
Q 036712 369 VCDGCGLFRPCKLKRMKGLVSETQFLCKHCSK-LQKSEQYCGICKNIW 415 (1020)
Q Consensus 369 ~C~~Cg~~~p~k~~~~~~~~~~~~~lC~~C~~-l~~~g~~C~iC~k~y 415 (1020)
-|++|=-. .++ .....+-.||-.|-. |..-.++|+||++.-
T Consensus 30 nCKsCWf~--~k~----LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pL 71 (99)
T 2ko5_A 30 FCKSCWFE--NKG----LVECNNHYLCLNCLTLLLSVSNRCPICKMPL 71 (99)
T ss_dssp CCCSSCSC--CSS----EEECSSCEEEHHHHHHTCSSSSEETTTTEEC
T ss_pred cChhhccc--cCC----eeeecchhhHHHHHHHHHhhccCCcccCCcC
Confidence 47777432 222 122336789999976 556789999998743
No 312
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=20.26 E-value=37 Score=29.26 Aligned_cols=33 Identities=15% Similarity=0.379 Sum_probs=19.3
Q ss_pred ccccccccccCCCCCCceecCCCCcEEcCccccc
Q 036712 407 YCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEI 440 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~ 440 (1020)
-||+|+.--.-+.....+.|..|+.+|=.. ++|
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~-dGI 42 (70)
T 2js4_A 10 VCPVCKGRLEFQRAQAELVCNADRLAFPVR-DGV 42 (70)
T ss_dssp BCTTTCCBEEEETTTTEEEETTTTEEEEEE-TTE
T ss_pred ECCCCCCcCEEeCCCCEEEcCCCCceecCC-CCe
Confidence 467776644333345566777777777555 444
No 313
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=20.23 E-value=39 Score=28.97 Aligned_cols=30 Identities=7% Similarity=0.046 Sum_probs=16.2
Q ss_pred ccccccccccCCCCCCceecCCCCcEEcCc
Q 036712 407 YCGICKNIWHHSDSGNWVCCDGCNVWVHAE 436 (1020)
Q Consensus 407 ~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~ 436 (1020)
-||+|+.--.-+.....+.|..|+.+|=..
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (68)
T 2jr6_A 10 VCPVTKGRLEYHQDKQELWSRQAKLAYPIK 39 (68)
T ss_dssp BCSSSCCBCEEETTTTEEEETTTTEEEEEE
T ss_pred ECCCCCCcCeEeCCCCEEEcCCCCcEecCC
Confidence 366666543333334556666676666544
No 314
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=20.08 E-value=15 Score=35.56 Aligned_cols=47 Identities=17% Similarity=0.308 Sum_probs=32.7
Q ss_pred CcCccccccccccCCCCCCceecCCCCcEEcCcccccchhhhcccCCCceeCCCcCccc
Q 036712 404 SEQYCGICKNIWHHSDSGNWVCCDGCNVWVHAECDEISGKHFKDLEHIDYYCPNCRVKF 462 (1020)
Q Consensus 404 ~g~~C~iC~k~y~~~d~~~wv~Cd~C~~WvH~~C~~~~~~~~~~l~~~~Y~Cp~C~~~~ 462 (1020)
....|+||...+.+ -|+. .|.+-|+..|.... +......||.|+...
T Consensus 30 ~~~~C~IC~~~~~~-----pv~~-~CgH~FC~~Ci~~~------~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 30 AKYLCSACRNVLRR-----PFQA-QCGHRYCSFCLASI------LSSGPQNCAACVHEG 76 (141)
T ss_dssp GGGBCTTTCSBCSS-----EEEC-TTSCEEEHHHHHHH------GGGSCEECHHHHHTT
T ss_pred cCcCCCCCChhhcC-----cEEC-CCCCccCHHHHHHH------HhcCCCCCCCCCCcc
Confidence 45568999877643 2564 89999999996321 223457999999754
Done!