Query 036716
Match_columns 208
No_of_seqs 130 out of 1553
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 07:31:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036716.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036716hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nxu_A Cytochrome P450 3A4; al 99.9 2.1E-26 7.3E-31 186.4 15.4 158 15-181 18-176 (485)
2 3k9v_A 1,25-dihydroxyvitamin D 99.9 2E-25 6.7E-30 180.5 16.9 178 15-198 28-216 (482)
3 3s79_A Cytochrome P450 19A1; o 99.9 2.6E-23 8.9E-28 169.0 18.1 156 15-177 49-209 (503)
4 3pm0_A Cypib1, cytochrome P450 99.9 2.9E-24 9.9E-29 174.7 10.9 157 15-179 13-177 (507)
5 3e6i_A CYPIIE1, P450-J, cytoch 99.9 7.6E-24 2.6E-28 171.0 12.9 157 15-180 14-172 (476)
6 2ij2_A Cytochrome P450 BM3; mo 99.9 7.2E-23 2.5E-27 165.4 16.3 175 14-199 6-184 (470)
7 3swz_A Steroid 17-alpha-hydrox 99.9 1.3E-23 4.4E-28 170.5 11.5 156 15-178 12-172 (494)
8 3n9y_A Cholesterol SIDE-chain 99.9 7.6E-23 2.6E-27 165.6 15.7 176 15-197 13-202 (487)
9 2fdv_A Cytochrome P450 2A6; CY 99.9 4.6E-23 1.6E-27 166.7 14.2 155 15-178 14-171 (476)
10 1po5_A Cytochrome P450 2B4; ox 99.9 8.9E-23 3.1E-27 165.0 14.5 155 15-178 14-171 (476)
11 2hi4_A Cytochrome P450 1A2; CY 99.9 5.5E-23 1.9E-27 167.0 12.4 156 15-178 20-187 (495)
12 3gw9_A Sterol 14alpha-demethyl 99.9 4.4E-23 1.5E-27 165.4 10.2 166 16-195 9-177 (450)
13 3ld6_A Lanosterol 14-alpha dem 99.9 1.4E-22 4.7E-27 163.3 12.5 150 18-179 19-170 (461)
14 3czh_A Cytochrome P450 2R1; vi 99.9 4E-22 1.4E-26 161.4 14.9 157 15-178 16-176 (481)
15 3dbg_A Putative cytochrome P45 99.9 7E-23 2.4E-27 165.2 9.5 166 15-199 27-194 (467)
16 1r9o_A Cytochrome P450 2C9; mo 99.9 2E-22 6.8E-27 163.0 11.8 155 15-178 15-172 (477)
17 1n97_A CYP175A1; electron tran 99.9 1.1E-21 3.6E-26 155.0 13.1 161 15-199 3-164 (389)
18 3mdm_A Cholesterol 24-hydroxyl 99.9 5.1E-21 1.7E-25 153.8 17.1 159 33-200 10-175 (456)
19 3tbg_A Cytochrome P450 2D6; mo 99.9 5.8E-22 2E-26 160.0 11.4 158 15-180 14-177 (479)
20 3i3k_A Lanosterol 14-alpha dem 99.9 2E-21 7E-26 156.3 12.5 151 16-178 17-169 (461)
21 2ve3_A Putative cytochrome P45 99.9 2.1E-21 7.1E-26 155.8 12.4 145 15-173 16-161 (444)
22 2cib_A Cytochrome P450 51; hem 99.9 1.2E-21 4.1E-26 157.6 10.8 163 16-195 10-172 (455)
23 3qz1_A Steroid 21-hydroxylase; 99.8 1.1E-21 3.7E-26 159.2 5.7 136 32-174 42-180 (496)
24 2cd8_A Cytochrome P450 monooxy 99.8 3.2E-20 1.1E-24 148.6 14.1 150 15-177 30-186 (436)
25 1izo_A P450bsbeta, cytochrome 99.8 1.9E-19 6.5E-24 143.3 16.4 149 15-178 4-156 (417)
26 3awm_A Fatty acid alpha-hydrox 99.8 3.3E-19 1.1E-23 141.8 14.3 148 16-178 4-155 (415)
27 3v8d_A Cholesterol 7-alpha-mon 99.8 1.5E-19 5.1E-24 146.6 9.2 155 15-178 17-177 (491)
28 1jfb_A Nitric-oxide reductase 99.8 1E-17 3.5E-22 132.8 13.4 151 15-177 5-163 (404)
29 1ued_A P450 OXYC, P450 monooxy 99.8 7.6E-18 2.6E-22 133.6 11.8 142 15-176 14-169 (406)
30 3b6h_A Prostacyclin synthase; 99.7 1.3E-16 4.3E-21 129.6 17.9 153 15-178 22-177 (498)
31 3dax_A Cytochrome P450 7A1; ch 99.7 9.3E-18 3.2E-22 135.9 10.7 151 19-178 22-177 (491)
32 3dsk_A Cytochrome P450 74A, ch 99.7 3E-17 1E-21 133.1 13.4 157 15-179 32-206 (495)
33 2zbx_A Cytochrome P450-SU1; be 99.7 3E-17 1E-21 130.4 11.8 148 15-177 9-168 (412)
34 3oo3_A OXY protein; cytochrome 99.7 5.3E-17 1.8E-21 127.8 12.8 135 33-177 12-152 (384)
35 1s1f_A Putative cytochrome P45 99.7 9.6E-17 3.3E-21 127.3 13.1 145 15-177 12-166 (406)
36 3abb_A CYP105D6, cytochrome P4 99.7 4.8E-17 1.6E-21 129.1 10.8 131 34-176 25-166 (408)
37 3dan_A Cytochrome P450 74A2; A 99.7 2.2E-16 7.4E-21 127.3 14.7 156 15-178 13-187 (473)
38 3a4g_A Vitamin D hydroxylase; 99.7 1.6E-16 5.6E-21 126.2 12.2 131 34-177 21-159 (411)
39 1z8o_A 6-deoxyerythronolide B 99.7 1.4E-16 5E-21 126.2 11.8 131 34-177 15-162 (404)
40 2wm5_A CYP124, putative cytoch 99.7 2.3E-16 7.8E-21 126.2 13.0 135 34-177 45-192 (435)
41 3ejb_B Biotin biosynthesis cyt 99.7 2.6E-16 8.8E-21 124.7 13.0 132 34-177 14-152 (404)
42 1odo_A Putative cytochrome P45 99.7 2.2E-16 7.5E-21 125.3 12.2 133 34-176 16-161 (408)
43 3b98_A Prostaglandin I2 syntha 99.7 3E-16 1E-20 126.5 12.5 149 15-175 22-174 (475)
44 2zwu_A Camphor 5-monooxygenase 99.7 1.7E-16 6E-21 126.2 10.9 130 34-177 38-173 (415)
45 3aba_A Cytochrome P450; oxidor 99.7 1.6E-16 5.4E-21 126.0 10.0 132 34-177 20-160 (403)
46 2xkr_A CYP142, putative cytoch 99.7 3.9E-16 1.3E-20 123.4 11.8 129 33-177 18-147 (398)
47 2xbk_A PIMD protein; epoxidati 99.7 8.3E-16 2.8E-20 121.9 13.1 132 34-177 27-170 (404)
48 3tyw_A Putative cytochrome P45 99.7 9.1E-16 3.1E-20 122.1 12.8 133 34-178 30-173 (417)
49 2z3t_A Cytochrome P450; monoxy 99.7 1.4E-15 4.7E-20 121.4 13.5 131 34-177 21-170 (425)
50 1gwi_A CYP154C1, cytochrome P4 99.7 9.3E-16 3.2E-20 121.9 11.8 132 34-177 18-165 (411)
51 2dkk_A Cytochrome P450; CYP158 99.7 1.1E-15 3.9E-20 121.4 12.2 132 34-177 28-169 (411)
52 2uuq_A CYP130, cytochrome P450 99.6 1.4E-15 4.8E-20 120.9 12.2 130 34-177 26-168 (414)
53 2y5n_A MYCG, P-450-like protei 99.6 5.4E-16 1.9E-20 123.4 9.8 132 34-177 38-176 (417)
54 2z36_A MOXA, cytochrome P450 t 99.6 1.9E-15 6.4E-20 120.2 12.3 133 34-177 23-169 (413)
55 3ivy_A Cytochrome P450 CYP125; 99.6 8.6E-16 2.9E-20 122.8 10.1 133 34-175 38-186 (433)
56 3tkt_A Cytochrome P450; aromat 99.6 1.1E-15 3.8E-20 122.8 10.3 131 35-176 47-196 (450)
57 4fb2_A P450CIN; heme, monooxyg 99.6 6.8E-16 2.3E-20 122.1 8.6 131 34-176 20-155 (398)
58 1cpt_A Cytochrome P450-TERP; o 99.6 2.6E-15 8.8E-20 119.9 9.9 146 21-177 11-175 (428)
59 2jjn_A Cytochrome P450 113A1; 99.6 5E-15 1.7E-19 117.6 11.0 127 34-178 29-158 (411)
60 1q5d_A P450 epoxidase; cytochr 99.6 4E-15 1.4E-19 118.5 9.1 129 34-177 27-167 (419)
61 3buj_A CALO2; heme, iron, meta 99.6 1.3E-14 4.5E-19 114.7 11.9 128 34-177 14-151 (397)
62 1lfk_A OXYB, P450 monooxygenas 99.6 1.7E-14 5.9E-19 114.0 11.5 126 41-177 21-161 (398)
63 1io7_A Cytochrome P450 CYP119; 99.6 1.4E-14 4.7E-19 113.5 10.4 125 36-177 2-139 (368)
64 3r9b_A Cytochrome P450 164A2; 99.6 2.9E-14 1E-18 113.4 12.2 129 33-177 29-168 (418)
65 3nc3_A Cytochrome P450 CYPX; c 99.6 3.7E-15 1.3E-19 119.4 6.5 143 35-197 55-199 (441)
66 3mgx_A Putative P450 monooxyge 99.6 8.4E-15 2.9E-19 116.5 8.3 131 34-176 38-177 (415)
67 3b4x_A 367AA long hypothetical 99.5 3E-14 1E-18 111.5 10.5 119 37-175 3-134 (367)
68 2rfb_A Cytochrome P450; heme, 99.5 1.4E-14 4.8E-19 112.4 7.1 113 44-177 2-116 (343)
69 3oft_A Cytochrome P450, CYP101 99.5 8.2E-14 2.8E-18 110.0 10.5 131 33-176 24-157 (396)
70 1n40_A P450 MT2, cytochrome P4 99.5 1.1E-14 3.7E-19 115.2 5.3 128 34-177 17-155 (396)
71 3rwl_A Cytochrome P450 alkane 99.5 5.3E-13 1.8E-17 106.4 15.1 132 33-176 38-182 (426)
72 3lxh_A Cytochrome P450; heme, 99.5 1.5E-13 5.2E-18 109.4 9.6 132 34-177 39-174 (421)
73 2wiy_A XPLA-heme, cytochrome P 99.4 1.7E-12 5.8E-17 102.5 13.0 128 34-176 21-150 (394)
74 3p3o_A Cytochrome P450; monoox 99.4 9.5E-13 3.3E-17 104.7 7.3 128 34-177 34-171 (416)
75 4dnj_A Putative cytochrome P45 99.2 3.7E-11 1.3E-15 95.4 10.1 142 16-172 17-168 (412)
76 4dxy_A Cytochrome P450, CYP101 98.9 5E-09 1.7E-13 83.2 10.5 131 34-176 38-172 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.1 5.3E-08 1.8E-12 76.4 -4.5 128 18-177 42-180 (381)
78 2diu_A KIAA0430 protein; struc 70.6 2.6 8.8E-05 25.8 2.1 51 22-77 14-65 (96)
79 1whx_A Hypothetical protein ri 60.4 21 0.00073 21.8 5.1 43 35-77 23-65 (111)
80 2ytc_A PRE-mRNA-splicing facto 52.8 29 0.001 19.6 4.8 52 21-77 16-67 (85)
81 2wbr_A GW182, gawky, LD47780P; 52.4 35 0.0012 20.4 4.8 51 21-76 11-61 (89)
82 2cq2_A Hypothetical protein LO 50.7 38 0.0013 21.2 5.0 42 36-77 41-82 (114)
83 1x5p_A Negative elongation fac 50.2 30 0.001 20.3 4.4 43 35-77 26-68 (97)
84 1iqt_A AUF1, heterogeneous nuc 46.9 34 0.0012 18.7 5.1 43 36-78 13-61 (75)
85 2a3j_A U1 small nuclear ribonu 45.8 14 0.00049 23.5 2.5 56 21-77 33-91 (127)
86 3r27_A HnRNP L, heterogeneous 40.3 61 0.0021 19.6 4.8 53 20-77 24-76 (100)
87 2krb_A Eukaryotic translation 40.1 49 0.0017 18.5 4.6 43 35-77 20-66 (81)
88 1why_A Hypothetical protein ri 40.1 55 0.0019 19.1 5.0 52 21-77 21-72 (97)
89 1x4c_A Splicing factor, argini 40.0 60 0.002 19.5 4.9 51 21-77 19-69 (108)
90 1wex_A Hypothetical protein (r 39.6 58 0.002 19.7 4.6 51 21-76 19-69 (104)
91 1x4g_A Nucleolysin TIAR; struc 38.9 62 0.0021 19.4 4.8 52 21-77 29-80 (109)
92 2dgu_A Heterogeneous nuclear r 38.4 61 0.0021 19.1 5.0 50 21-77 15-64 (103)
93 1sjq_A Polypyrimidine tract-bi 38.1 68 0.0023 19.6 4.9 51 21-76 20-70 (105)
94 3d2w_A TAR DNA-binding protein 38.1 57 0.002 18.8 4.3 49 21-74 15-64 (89)
95 2d9o_A DNAJ (HSP40) homolog, s 37.6 67 0.0023 19.3 5.0 44 35-78 30-74 (100)
96 2nlw_A Eukaryotic translation 37.5 62 0.0021 19.3 4.5 57 21-77 19-80 (105)
97 1s79_A Lupus LA protein; RRM, 37.3 67 0.0023 19.3 5.9 53 21-78 15-72 (103)
98 2cpj_A Non-POU domain-containi 36.1 35 0.0012 20.1 3.1 52 21-77 19-70 (99)
99 2dgt_A RNA-binding protein 30; 35.8 63 0.0022 18.5 4.6 50 21-77 14-63 (92)
100 1x4d_A Matrin 3; structural ge 35.7 46 0.0016 20.2 3.6 52 21-77 19-71 (102)
101 3beg_B Splicing factor, argini 35.6 60 0.0021 19.8 4.3 51 21-77 20-70 (115)
102 2dnp_A RNA-binding protein 14; 34.4 66 0.0023 18.4 4.9 50 21-77 13-62 (90)
103 2la4_A Nuclear and cytoplasmic 34.3 67 0.0023 18.8 4.2 52 21-77 31-82 (101)
104 3v4m_A Splicing factor U2AF 65 33.2 81 0.0028 19.0 5.1 43 35-77 28-78 (105)
105 2dnq_A RNA-binding protein 4B; 33.1 70 0.0024 18.2 4.5 40 36-77 22-61 (90)
106 3ex7_B RNA-binding protein 8A; 32.9 82 0.0028 19.4 4.6 52 21-77 26-83 (126)
107 2kvi_A Nuclear polyadenylated 32.9 67 0.0023 18.7 4.0 50 21-77 14-64 (96)
108 2p22_C Protein SRN2; endosome, 32.6 1.2E+02 0.0042 20.9 5.9 57 104-162 110-167 (192)
109 2bz2_A Negative elongation fac 32.0 49 0.0017 20.6 3.4 43 35-77 50-92 (121)
110 2cq1_A PTB-like protein L; RRM 31.3 58 0.002 19.6 3.5 51 21-76 19-69 (101)
111 2hvz_A Splicing factor, argini 30.9 83 0.0028 18.4 4.3 42 36-77 14-56 (101)
112 2ad9_A Polypyrimidine tract-bi 30.8 73 0.0025 20.0 4.0 51 21-76 35-85 (119)
113 2mss_A Protein (musashi1); RNA 30.8 69 0.0023 17.4 5.2 43 36-78 13-61 (75)
114 3ns6_A Eukaryotic translation 30.1 87 0.003 18.4 4.6 43 35-77 25-73 (100)
115 3mdf_A Peptidyl-prolyl CIS-tra 30.0 76 0.0026 17.7 4.6 42 36-77 21-68 (85)
116 2xnq_A Nuclear polyadenylated 29.9 87 0.003 18.3 4.8 51 21-77 26-76 (97)
117 1nu4_A U1A RNA binding domain; 29.9 83 0.0029 18.1 4.7 56 21-77 12-70 (97)
118 2dnm_A SRP46 splicing factor; 29.8 83 0.0028 18.5 4.1 52 21-77 17-74 (103)
119 2do4_A Squamous cell carcinoma 29.4 63 0.0021 18.9 3.5 52 21-77 21-77 (100)
120 2dgx_A KIAA0430 protein; RRM d 28.9 89 0.003 18.1 4.4 56 21-77 13-71 (96)
121 3md1_A Nuclear and cytoplasmic 28.6 80 0.0027 17.5 3.9 42 36-77 15-62 (83)
122 2cq3_A RNA-binding protein 9; 28.5 83 0.0029 18.5 4.0 52 21-77 19-74 (103)
123 1whv_A Poly(A)-specific ribonu 28.0 60 0.0021 19.8 3.0 38 36-76 29-67 (100)
124 1whw_A Hypothetical protein ri 27.9 93 0.0032 18.0 4.9 42 36-77 22-69 (99)
125 3s6e_A RNA-binding protein 39; 27.4 99 0.0034 19.1 4.2 43 35-77 30-74 (114)
126 2ywk_A Putative RNA-binding pr 27.3 93 0.0032 17.8 4.0 42 36-77 30-76 (95)
127 2fy1_A RNA-binding motif prote 27.0 1E+02 0.0035 18.8 4.3 52 21-77 11-67 (116)
128 2cph_A RNA binding motif prote 27.0 1E+02 0.0035 18.2 4.9 52 21-77 19-77 (107)
129 2dgv_A HnRNP M, heterogeneous 26.9 89 0.003 17.8 3.8 52 21-77 12-67 (92)
130 1x5s_A Cold-inducible RNA-bind 26.9 90 0.0031 18.2 3.9 52 21-77 16-73 (102)
131 1x4a_A Splicing factor, argini 26.7 1.1E+02 0.0036 18.2 5.1 52 21-77 26-80 (109)
132 4f25_A Polyadenylate-binding p 26.5 89 0.0031 19.0 3.9 52 21-77 9-64 (115)
133 2cqi_A Nucleolysin TIAR; RNA r 26.3 1E+02 0.0035 18.0 4.2 51 21-76 19-73 (103)
134 2cpf_A RNA binding motif prote 26.0 98 0.0034 17.9 3.9 52 21-77 9-69 (98)
135 1p27_B RNA-binding protein 8A; 25.9 1E+02 0.0034 18.2 4.0 52 21-77 27-84 (106)
136 2x1f_A MRNA 3'-END-processing 25.9 1E+02 0.0035 17.8 4.6 42 36-77 16-63 (96)
137 2cqc_A Arginine/serine-rich sp 25.8 95 0.0032 17.7 3.8 42 36-77 29-76 (95)
138 1oo0_B CG8781-PA, drosophila Y 25.8 1.1E+02 0.0038 18.2 4.7 52 21-77 30-87 (110)
139 1x4f_A Matrin 3; structural ge 25.6 49 0.0017 20.5 2.5 52 21-76 29-80 (112)
140 2jvo_A Nucleolar protein 3; nu 25.2 97 0.0033 18.6 3.9 50 21-77 35-84 (108)
141 2dnr_A Synaptojanin-1; RRM dom 24.9 1.2E+02 0.004 18.2 5.1 42 35-78 28-69 (91)
142 4a8x_A RNA-binding protein wit 24.4 1E+02 0.0034 17.2 4.7 42 36-77 18-66 (88)
143 1x5u_A Splicing factor 3B subu 24.4 1.1E+02 0.0039 17.9 4.7 52 21-77 19-76 (105)
144 2cq4_A RNA binding motif prote 24.4 1.2E+02 0.0041 18.1 4.2 40 36-75 39-84 (114)
145 4fxv_A ELAV-like protein 1; RN 24.3 1.1E+02 0.0038 18.0 3.9 52 21-77 23-80 (99)
146 3pgw_S U1-70K; protein-RNA com 23.9 93 0.0032 24.5 4.3 52 21-77 106-163 (437)
147 1sjr_A Polypyrimidine tract-bi 23.6 1.2E+02 0.004 20.4 4.2 52 21-77 50-103 (164)
148 2dnh_A Bruno-like 5, RNA bindi 23.6 97 0.0033 18.2 3.6 52 21-77 19-75 (105)
149 3s8s_A Histone-lysine N-methyl 23.4 92 0.0032 18.9 3.5 52 21-77 10-67 (110)
150 3zzy_A Polypyrimidine tract-bi 23.2 1E+02 0.0035 19.7 3.7 52 21-77 32-85 (130)
151 1wf1_A RNA-binding protein RAL 22.9 1.2E+02 0.0039 18.1 3.9 40 36-77 42-81 (110)
152 3bs9_A Nucleolysin TIA-1 isofo 22.9 1.1E+02 0.0037 17.1 4.0 42 36-77 20-67 (87)
153 3s7r_A Heterogeneous nuclear r 22.7 1.1E+02 0.0038 17.1 3.8 53 21-78 15-73 (87)
154 2dgo_A Cytotoxic granule-assoc 22.5 1.3E+02 0.0044 18.0 4.1 52 21-77 19-76 (115)
155 2cqd_A RNA-binding region cont 22.3 1.4E+02 0.0047 18.0 4.5 53 21-78 21-79 (116)
156 1x4h_A RNA-binding protein 28; 22.2 1.3E+02 0.0045 17.8 4.9 52 21-77 19-76 (111)
157 3ulh_A THO complex subunit 4; 22.0 1.2E+02 0.0041 17.8 3.8 52 21-77 33-89 (107)
158 2dit_A HIV TAT specific factor 22.0 99 0.0034 18.6 3.4 43 35-77 39-83 (112)
159 1wf0_A TDP-43, TAR DNA-binding 21.9 91 0.0031 17.6 3.1 40 36-75 19-59 (88)
160 2cqb_A Peptidyl-prolyl CIS-tra 21.6 86 0.0029 18.3 3.0 52 21-77 16-73 (102)
161 2err_A Ataxin-2-binding protei 21.5 87 0.003 18.8 3.1 52 21-77 33-88 (109)
162 2dis_A Unnamed protein product 21.5 1.4E+02 0.0046 17.7 5.0 52 21-77 12-71 (109)
163 2e5h_A Zinc finger CCHC-type a 21.5 1.2E+02 0.0041 17.3 3.6 52 21-77 20-77 (94)
164 1jmt_A Splicing factor U2AF 35 21.2 1.4E+02 0.0049 17.8 4.6 42 36-77 40-87 (104)
165 2cpz_A CUG triplet repeat RNA- 21.2 1E+02 0.0036 18.5 3.4 52 21-77 29-86 (115)
166 2pe8_A Splicing factor 45; RRM 21.1 1.5E+02 0.005 17.8 4.2 43 35-77 26-75 (105)
167 2e5i_A Heterogeneous nuclear r 20.8 1.7E+02 0.0057 18.4 4.4 42 36-77 39-81 (124)
168 1fxl_A Paraneoplastic encephal 20.4 1.7E+02 0.0058 18.5 4.6 42 36-77 16-63 (167)
169 2dgp_A Bruno-like 4, RNA bindi 20.4 1.4E+02 0.0048 17.5 4.4 52 21-77 17-74 (106)
170 2ku7_A MLL1 PHD3-CYP33 RRM chi 20.2 1.7E+02 0.0057 18.2 4.7 52 21-77 67-124 (140)
171 2kxn_B Transformer-2 protein h 20.1 1.7E+02 0.0058 18.2 4.5 52 21-77 50-107 (129)
172 2jwn_A Embryonic polyadenylate 20.1 1.4E+02 0.0046 18.2 3.9 40 36-75 50-95 (124)
No 1
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.94 E-value=2.1e-26 Score=186.38 Aligned_cols=158 Identities=17% Similarity=0.241 Sum_probs=137.2
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcC-CCCCCCChhhhhhhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKN-FSNYPKGPDLRMILE 93 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~-~~~~~~~~~~~~~~~ 93 (208)
||+++|++||++.+.. +.+.++.+++++||+++++ ++|+.++|+++||+++++|+.++ .+.|.+++.+.. ..
T Consensus 18 GP~~~PliGn~~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~-~~ 90 (485)
T 3nxu_A 18 GPTPLPFLGNILSYHK---GFCMFDMECHKKYGKVWGF---YDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP-VG 90 (485)
T ss_dssp CCCCBTTTBTGGGGGG---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSC-CG
T ss_pred CCCCcCeecCcHHhhc---ChHHHHHHHHHHcCCeEEE---EeCCCCEEEECCHHHHHHHHhccchhhccCCccccc-cc
Confidence 8899999999998853 4788889999999999999 89999999999999999999876 566776654322 23
Q ss_pred hccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhc
Q 036716 94 PFGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLG 173 (208)
Q Consensus 94 ~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg 173 (208)
.+++++++.+|+.|+++||+++++|+.++++.+ .+.++++ ++.+++.+.+..+.++++|+.+.+..+++|+|+.++||
T Consensus 91 ~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG 168 (485)
T 3nxu_A 91 FMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM-VPIIAQY-GDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFG 168 (485)
T ss_dssp GGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred ccccCccccCCcHHHHHHhhcChhcCHHHHHHH-HHHHHHH-HHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcC
Confidence 567889999999999999999999999999996 6899998 59999999876666778999999999999999999999
Q ss_pred CCCCCCCC
Q 036716 174 IDPNYLSF 181 (208)
Q Consensus 174 ~~~~~~~~ 181 (208)
.+++..++
T Consensus 169 ~~~~~~~~ 176 (485)
T 3nxu_A 169 VNIDSLNN 176 (485)
T ss_dssp CCCCGGGC
T ss_pred CccccccC
Confidence 99987654
No 2
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.94 E-value=2e-25 Score=180.48 Aligned_cols=178 Identities=13% Similarity=0.205 Sum_probs=144.4
Q ss_pred cCCCCccccchHHHHHc--ccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhh--
Q 036716 15 SFKRSSRTRMLSTLVLN--AHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRM-- 90 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~-- 90 (208)
||+++|++||+..+... .++++..+.+++++||+++++ ++|+.++|+++||+++++|+.++ +.|.+++....
T Consensus 28 GP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~---~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~~~~ 103 (482)
T 3k9v_A 28 GPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRM---KLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIKPWK 103 (482)
T ss_dssp CSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCHHHH
T ss_pred CCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEE---ccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCchHHH
Confidence 89999999999998642 346788999999999999999 88999999999999999999886 67887753221
Q ss_pred -hh--hhccCcccccCChhHHHHHHhhhccc-chhHHHHHHHHHHHHHHHhhHHHHHhhhhc-cCCcccHHHHHHHHHHH
Q 036716 91 -IL--EPFGDGVFAADGNLWKMQRKMIHSVM-KHNKFESALEKTIYQKLENGLIPVLDHASE-VGIKVDLQDVFQRFTFD 165 (208)
Q Consensus 91 -~~--~~~g~~i~~~~g~~w~~~Rk~l~~~f-~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~-~~~~vd~~~~~~~~~~~ 165 (208)
.. ...++++++++|+.|+++||.+++.| +.+.++.+ ++.++++ ++.+++.+.+..+ .++++|+.+.+..+++|
T Consensus 104 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~-~~~i~~~-~~~l~~~l~~~~~~~g~~vd~~~~~~~~t~d 181 (482)
T 3k9v_A 104 AYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKL-DKKINEV-LADFLERMDELCDERGRIPDLYSELNKWSFE 181 (482)
T ss_dssp HHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGG-HHHHHHH-HHHHHHHHHHHCCTTSCCTTHHHHHHHHHHH
T ss_pred HHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHH-HHHHHHH-HHHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 11 12368899999999999999999996 77788886 6889888 5999999987643 45679999999999999
Q ss_pred HHHHHhhcCCCCCCCCC--CCchHHHHHHHHHHHH
Q 036716 166 NICMSVLGIDPNYLSFE--FPQVAYANAFNATEQA 198 (208)
Q Consensus 166 ~i~~~~fg~~~~~~~~~--~~~~~~~~~~~~~~~~ 198 (208)
+|+.++||.+++..+++ .+..++.+.+..++..
T Consensus 182 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (482)
T 3k9v_A 182 SICLVLYEKRFGLLQKETEEEALTFITAIKTMMST 216 (482)
T ss_dssp HHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTT
T ss_pred HHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHH
Confidence 99999999999765432 2346677777666544
No 3
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.91 E-value=2.6e-23 Score=169.00 Aligned_cols=156 Identities=12% Similarity=0.116 Sum_probs=125.9
Q ss_pred cCCCCccccchHHHHHcc-cchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhh--
Q 036716 15 SFKRSSRTRMLSTLVLNA-HQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMI-- 91 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~-- 91 (208)
||+++|++||+.++.... ...+..+.+++++||+++++ ++|+.++|+++||+++++++.++ .|.+++.....
T Consensus 49 GP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~~~~ 123 (503)
T 3s79_A 49 GPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRV---WISGEETLIISKSSSMFHIMKHN--HYSSRFGSKLGLQ 123 (503)
T ss_dssp SCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEE---ESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHHHHH
T ss_pred CCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEE---EeCCccEEEECCHHHHHHHHhcC--CCCCcchhhhhhh
Confidence 888999999999985421 23556788999999999999 99999999999999999999654 45554322111
Q ss_pred -hhhccCcccc-cCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHH
Q 036716 92 -LEPFGDGVFA-ADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICM 169 (208)
Q Consensus 92 -~~~~g~~i~~-~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~ 169 (208)
....++++++ .+|+.|+++||+++++|+...++++ .+.+.++ ++.+++.+.+..+.++++|+.+.++.+++|+++.
T Consensus 124 ~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~-~~~~~~~-~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi~~ 201 (503)
T 3s79_A 124 CIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRM-VTVCAES-LKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSNT 201 (503)
T ss_dssp HHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHH-HHHHHHH-HHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHHHH
T ss_pred hhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHH-HHHHHHH-HHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHHHH
Confidence 1334567654 5699999999999999999999997 4788887 5888888876555567899999999999999999
Q ss_pred HhhcCCCC
Q 036716 170 SVLGIDPN 177 (208)
Q Consensus 170 ~~fg~~~~ 177 (208)
++||.+++
T Consensus 202 ~~fG~~~~ 209 (503)
T 3s79_A 202 LFLRIPLD 209 (503)
T ss_dssp HHTCCCCC
T ss_pred HHcCcccC
Confidence 99998774
No 4
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.91 E-value=2.9e-24 Score=174.70 Aligned_cols=157 Identities=13% Similarity=0.117 Sum_probs=116.4
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh-h
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-E 93 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~-~ 93 (208)
||+++|++||+..+.. +++..+.+++++||+++++ ++|+.++|+++||+++++|+.++.+.|.+++...... .
T Consensus 13 gP~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~ 86 (507)
T 3pm0_A 13 GPFAWPLIGNAAAVGQ---AAHLSFARLARRYGDVFQI---RLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVV 86 (507)
T ss_dssp ---------------C---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHHG
T ss_pred CCCCCCeeCchhhcCc---cHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHhh
Confidence 7889999999988853 5788999999999999999 8999999999999999999988777888776544333 2
Q ss_pred hccCccccc-CChhHHHHHHhhhcccchhHH------HHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHH
Q 036716 94 PFGDGVFAA-DGNLWKMQRKMIHSVMKHNKF------ESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDN 166 (208)
Q Consensus 94 ~~g~~i~~~-~g~~w~~~Rk~l~~~f~~~~l------~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~ 166 (208)
..|.+++++ +|+.|+++||++++.|+.... +.+ ++.+.++ ++.+++.+.+..++++++|+.+.+..+++|+
T Consensus 87 ~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~-~~~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dv 164 (507)
T 3pm0_A 87 SGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVL-EGHVLSE-ARELVALLVRGSADGAFLDPRPLTVVAVANV 164 (507)
T ss_dssp GGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHH-HHHHHHH-HHHHHHHHHHTTGGGCCBCCHHHHHHHHHHH
T ss_pred cCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHH-HHHHHHH-HHHHHHHHHhhcccCCCcChHHHHHHHHHHH
Confidence 246777555 599999999999998764332 334 6888888 5999999987655567899999999999999
Q ss_pred HHHHhhcCCCCCC
Q 036716 167 ICMSVLGIDPNYL 179 (208)
Q Consensus 167 i~~~~fg~~~~~~ 179 (208)
|+.++||.+++..
T Consensus 165 i~~~~fG~~~~~~ 177 (507)
T 3pm0_A 165 MSAVCFGCRYSHD 177 (507)
T ss_dssp HHHHHTSCCCCTT
T ss_pred HHHHHccccCCCC
Confidence 9999999988753
No 5
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.91 E-value=7.6e-24 Score=171.00 Aligned_cols=157 Identities=13% Similarity=0.122 Sum_probs=129.2
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEP 94 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~ 94 (208)
||+++|++||++++. ..+++..+.+++++||+++++ ++|+.++|+++||+++++|+.++...|++++.+......
T Consensus 14 gP~~~PliG~~~~~~--~~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~~~ 88 (476)
T 3e6i_A 14 GPFPLPIIGNLFQLE--LKNIPKSFTRLAQRFGPVFTL---YVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAH 88 (476)
T ss_dssp CCCCBTTTBTGGGCC--TTCHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGGGG
T ss_pred CCCCcccccChhhhc--cccHhHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhhee
Confidence 888999999998873 335788999999999999999 889999999999999999999876778877654444444
Q ss_pred ccCcccccCChhHHHHHHhhhcccchhHH--HHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhh
Q 036716 95 FGDGVFAADGNLWKMQRKMIHSVMKHNKF--ESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVL 172 (208)
Q Consensus 95 ~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l--~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~f 172 (208)
.+.++++++|+.|+++||++.+.|+...+ .. +++.++++ ++.+++.+.+. .++++|+.+.+..+++|+|+.++|
T Consensus 89 ~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~-~~~~i~~~-~~~l~~~l~~~--~~~~~d~~~~~~~~~~dvi~~~~f 164 (476)
T 3e6i_A 89 RDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQG-NESRIQRE-AHFLLEALRKT--QGQPFDPTFLIGCAPCNVIADILF 164 (476)
T ss_dssp TTSSSTTCCSTTHHHHHHHHHHHHHHTC-CCSH-HHHHHHHH-HHHHHHHHHTT--TTSCBCTHHHHTHHHHHHHHHHHH
T ss_pred cCCCEEecCCcHHHHHHHHHHHHHHhcCCCchH-HHHHHHHH-HHHHHHHHHHh--CCCCcChHHHHHHHHHHHHHHHHc
Confidence 55689999999999999988888875443 23 35777777 58999988653 356799999999999999999999
Q ss_pred cCCCCCCC
Q 036716 173 GIDPNYLS 180 (208)
Q Consensus 173 g~~~~~~~ 180 (208)
|.+++..+
T Consensus 165 G~~~~~~~ 172 (476)
T 3e6i_A 165 RKHFDYND 172 (476)
T ss_dssp SCCCCTTC
T ss_pred CCCCCCCC
Confidence 99987643
No 6
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.90 E-value=7.2e-23 Score=165.39 Aligned_cols=175 Identities=11% Similarity=0.151 Sum_probs=136.4
Q ss_pred hcCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh--hhhh
Q 036716 14 WSFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD--LRMI 91 (208)
Q Consensus 14 ~~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~--~~~~ 91 (208)
-||+++|++||+..+. .++.+..+.+++++||+++++ ++++.+.++++||+++++|+.+. .|.+... +...
T Consensus 6 PGP~~~p~iG~l~~~~--~~~~~~~~~~~~~~yG~v~~~---~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~ 78 (470)
T 2ij2_A 6 PQPKTFGELKNLPLLN--TDKPVQALMKIADELGEIFKF---EAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFV 78 (470)
T ss_dssp CCCCCCGGGTTGGGGC--SSCHHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHH
T ss_pred CCCCCCCccccHHHHh--cccchHHHHHHHHHhCCeEEE---ecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHH
Confidence 3788999999998873 235777888999999999999 88889999999999999999643 3544221 2222
Q ss_pred hhhccCccccc--CChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHH
Q 036716 92 LEPFGDGVFAA--DGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICM 169 (208)
Q Consensus 92 ~~~~g~~i~~~--~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~ 169 (208)
....+++++++ +|+.|+++||+++++|+.+.++.+ .+.+.++ ++.+++.+.+.. .++++|+.+.+..+++|+|+.
T Consensus 79 ~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~~~-~~~~vd~~~~~~~~~~~vi~~ 155 (470)
T 2ij2_A 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGY-HAMMVDI-AVQLVQKWERLN-ADEHIEVPEDMTRLTLDTIGL 155 (470)
T ss_dssp HHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHH-HHHHHHH-HHHHHHHHHTCC-TTCCEEHHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEcCCCchHHHHHHHHhccccCHHHHHHH-HHHHHHH-HHHHHHHHHhhC-CCCeEEHHHHHHHHHHHHHHH
Confidence 23457788876 799999999999999999999996 6889888 599999886532 345799999999999999999
Q ss_pred HhhcCCCCCCCCCCCchHHHHHHHHHHHHH
Q 036716 170 SVLGIDPNYLSFEFPQVAYANAFNATEQAV 199 (208)
Q Consensus 170 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (208)
++||.+++..+.+ +..++.+.+...+...
T Consensus 156 ~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~ 184 (470)
T 2ij2_A 156 CGFNYRFNSFYRD-QPHPFITSMVRALDEA 184 (470)
T ss_dssp HHHSCCCCGGGCS-SCCHHHHHHHHHHHHH
T ss_pred HHcCCcccccccC-CCCHHHHHHHHHHHHH
Confidence 9999998765221 2346666666555443
No 7
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.90 E-value=1.3e-23 Score=170.54 Aligned_cols=156 Identities=15% Similarity=0.149 Sum_probs=128.1
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh--
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-- 92 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~-- 92 (208)
||+++|++||++.+.. .+.++..+.+++++||+++++ ++|+.++|+++||+++++++.++...|.+++......
T Consensus 12 gP~~lPliGnl~~l~~-~~~~~~~~~~~~~kYG~i~~~---~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~~~ 87 (494)
T 3swz_A 12 SLLSLPLVGSLPFLPR-HGHMHNNFFKLQKKYGPIYSV---RMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIA 87 (494)
T ss_dssp CCBCCCEEEEESSCTT-SSCHHHHHHHTHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHHHH
T ss_pred CCCCCCeEcchHHhCC-CCchhHHHHHHHHHcCCEEEE---EeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHHh
Confidence 6777999999987743 235788899999999999999 9999999999999999999999878888777543322
Q ss_pred hhccCcccccC-ChhHHHHHHhhhcccch--hHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHH
Q 036716 93 EPFGDGVFAAD-GNLWKMQRKMIHSVMKH--NKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICM 169 (208)
Q Consensus 93 ~~~g~~i~~~~-g~~w~~~Rk~l~~~f~~--~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~ 169 (208)
...++|+++++ |+.|+++||+++++|+. ..++.+ ++.++++ ++.+++.+.+. .++++|+.+.+..+++|+|+.
T Consensus 88 ~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~-~~~i~~~-~~~l~~~l~~~--~~~~vd~~~~~~~~t~dvi~~ 163 (494)
T 3swz_A 88 SNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKL-EKIICQE-ISTLCDMLATH--NGQSIDISFPVFVAVTNVISL 163 (494)
T ss_dssp TTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCH-HHHHHHH-HHHHHHHHHHT--TTEEECCHHHHHHHHHHHHHH
T ss_pred ccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHH-HHHHHHHHHHc--CCCcccHHHHHHHHHHHHHHH
Confidence 22356787775 99999999999999974 345564 6888888 58899888752 456899999999999999999
Q ss_pred HhhcCCCCC
Q 036716 170 SVLGIDPNY 178 (208)
Q Consensus 170 ~~fg~~~~~ 178 (208)
++||.+++.
T Consensus 164 ~~fG~~~~~ 172 (494)
T 3swz_A 164 ICFNTSYKN 172 (494)
T ss_dssp HHHSCCCCT
T ss_pred HHcCCcCCC
Confidence 999998864
No 8
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.90 E-value=7.6e-23 Score=165.63 Aligned_cols=176 Identities=15% Similarity=0.153 Sum_probs=135.1
Q ss_pred cCCCCccccchHHHHHc--ccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhh--
Q 036716 15 SFKRSSRTRMLSTLVLN--AHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRM-- 90 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~-- 90 (208)
||+..|+. ++..+... .++++..+.+++++||+|+++ ++|+.++|+++||+++++|+.++ +.|++++....
T Consensus 13 GP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~---~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~~~~~ 87 (487)
T 3n9y_A 13 SPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYRE---KLGNVESVYVIDPEDVALLFKSE-GPNPERFLIPPWV 87 (487)
T ss_dssp CSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHHTC-CSSCCCCCCHHHH
T ss_pred CCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeec---cCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCCcHHH
Confidence 56656654 66666432 346788999999999999999 88999999999999999999876 56777653221
Q ss_pred -h--hhhccCcccccCChhHHHHHHhhhcc-cchhHHHHHHHHHHHHHHHhhHHHHHhhhh----ccCCcccHHHHHHHH
Q 036716 91 -I--LEPFGDGVFAADGNLWKMQRKMIHSV-MKHNKFESALEKTIYQKLENGLIPVLDHAS----EVGIKVDLQDVFQRF 162 (208)
Q Consensus 91 -~--~~~~g~~i~~~~g~~w~~~Rk~l~~~-f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~----~~~~~vd~~~~~~~~ 162 (208)
. ....++++++.+|+.|+++||+++++ |+.+.++.+ .+.++++ ++.+++.|.+.. +.+.++|+.+.+..+
T Consensus 88 ~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~ 165 (487)
T 3n9y_A 88 AYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNF-LPLLDAV-SRDFVSVLHRRIKKAGSGNYSGDISDDLFRF 165 (487)
T ss_dssp HHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTH-HHHHHHH-HHHHHHHHHHHHHHHTSSSEEECCHHHHHHH
T ss_pred HHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHh-hhHHHHH-HHHHHHHHHHHhcccccCCCCccHHHHHHHH
Confidence 1 12246789999999999999999995 999999997 6899888 599999987643 224479999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCC--chHHHHHHHHHHH
Q 036716 163 TFDNICMSVLGIDPNYLSFEFP--QVAYANAFNATEQ 197 (208)
Q Consensus 163 ~~~~i~~~~fg~~~~~~~~~~~--~~~~~~~~~~~~~ 197 (208)
++|+|+.++||.+++.+++... ..++.+.+..++.
T Consensus 166 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (487)
T 3n9y_A 166 AFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFH 202 (487)
T ss_dssp HHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHH
Confidence 9999999999999987664211 1334555544443
No 9
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.90 E-value=4.6e-23 Score=166.69 Aligned_cols=155 Identities=14% Similarity=0.089 Sum_probs=127.7
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhh-
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILE- 93 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~- 93 (208)
||+++|++||+..+. ..+++..+.+++++||+++++ ++++.++++++||+++++|+.++...|.+++.......
T Consensus 14 gP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~---~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 2fdv_A 14 GPTPLPFIGNYLQLN--TEQMYNSLMKISERYGPVFTI---HLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV 88 (476)
T ss_dssp CCCCBTTTBTGGGCC--TTBHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHH
T ss_pred CCCCCcccccHhhcC--CcchHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhh
Confidence 778899999998762 245788899999999999999 88888999999999999999766567776543222211
Q ss_pred hccCcccccCChhHHHHHHhhhcccchhHH--HHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHh
Q 036716 94 PFGDGVFAADGNLWKMQRKMIHSVMKHNKF--ESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSV 171 (208)
Q Consensus 94 ~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l--~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~ 171 (208)
..+.++++++|+.|+++||+++++|+...+ +.+ .+.++++ ++.+++.+.+. .++++|+.+.+..+++|+|++++
T Consensus 89 ~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~-~~~i~~~-~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~~ 164 (476)
T 2fdv_A 89 FKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGI-EERIQEE-AGFLIDALRGT--GGANIDPTFFLSRTVSNVISSIV 164 (476)
T ss_dssp HTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHH-HHHHHHH-HHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhH-HHHHHHH-HHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHHH
Confidence 236788889999999999999999988766 665 6888888 59999998753 34679999999999999999999
Q ss_pred hcCCCCC
Q 036716 172 LGIDPNY 178 (208)
Q Consensus 172 fg~~~~~ 178 (208)
||.+++.
T Consensus 165 fG~~~~~ 171 (476)
T 2fdv_A 165 FGDRFDY 171 (476)
T ss_dssp HSSCCCT
T ss_pred cCCcCCC
Confidence 9998874
No 10
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.89 E-value=8.9e-23 Score=164.99 Aligned_cols=155 Identities=17% Similarity=0.211 Sum_probs=127.7
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhh-
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILE- 93 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~- 93 (208)
||+++|++||+..+. ..+++..+.+++++||+++++ ++|+.++|+++||+++++|+.++...|.+++.......
T Consensus 14 gP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~---~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 1po5_A 14 GPSPLPVLGNLLQMD--RKGLLRSFLRLREKYGDVFTV---YLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPI 88 (476)
T ss_dssp CSCCBTTTBTGGGCC--TTCHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSC
T ss_pred CCCCCCccccHHhcc--CCcHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhh
Confidence 788899999998772 345788999999999999999 88888999999999999999776567877543322222
Q ss_pred hccCcccccCChhHHHHHHhhhcccchh--HHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHh
Q 036716 94 PFGDGVFAADGNLWKMQRKMIHSVMKHN--KFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSV 171 (208)
Q Consensus 94 ~~g~~i~~~~g~~w~~~Rk~l~~~f~~~--~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~ 171 (208)
..+.++++++|+.|+++||+++++|+.. ..+.+ .+.+.++ ++.+++.+.+. .++++|+.+.+..+++|+|++++
T Consensus 89 ~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~-~~~i~~~-~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~ 164 (476)
T 1po5_A 89 FQGYGVIFANGERWRALRRFSLATMRDFGMGKRSV-EERIQEE-ARCLVEELRKS--KGALLDNTLLFHSITSNIICSIV 164 (476)
T ss_dssp CSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHH-HHHHHHH-HHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHHH
T ss_pred cCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHH-HHHHHHH-HHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHHHH
Confidence 2457888899999999999999999877 45665 6888888 59999998753 35679999999999999999999
Q ss_pred hcCCCCC
Q 036716 172 LGIDPNY 178 (208)
Q Consensus 172 fg~~~~~ 178 (208)
||.+++.
T Consensus 165 fG~~~~~ 171 (476)
T 1po5_A 165 FGKRFDY 171 (476)
T ss_dssp HSSCCCT
T ss_pred cCCCCCC
Confidence 9998874
No 11
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.89 E-value=5.5e-23 Score=167.01 Aligned_cols=156 Identities=13% Similarity=0.079 Sum_probs=125.7
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEP 94 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~ 94 (208)
||+++|++|++..+.. +++..+.+++++||+++++ ++|+.++++++||+++++|+.++...|.+++........
T Consensus 20 gP~~~p~~G~~~~~~~---~~~~~~~~l~~~yG~v~~~---~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~ 93 (495)
T 2hi4_A 20 EPWGWPLLGHVLTLGK---NPHLALSRMSQRYGDVLQI---RIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLI 93 (495)
T ss_dssp CCCCBTTTBTHHHHTT---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTS
T ss_pred CCCCCcceeeHHhcCc---cHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHh
Confidence 6778899999988743 4788899999999999998 888999999999999999998775668766543322222
Q ss_pred -ccCccccc--CChhHHHHHHhhhcccchh---HH---H---HHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHH
Q 036716 95 -FGDGVFAA--DGNLWKMQRKMIHSVMKHN---KF---E---SALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRF 162 (208)
Q Consensus 95 -~g~~i~~~--~g~~w~~~Rk~l~~~f~~~---~l---~---~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~ 162 (208)
.+++++++ +|+.|+++||+++++|+.. .. + .+ ++.++++ ++.+++.+.+.+++++++|+.+.+..+
T Consensus 94 ~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~-~~~i~~~-~~~l~~~l~~~~~~~~~~d~~~~~~~~ 171 (495)
T 2hi4_A 94 TDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYL-EEHVSKE-AKALISRLQELMAGPGHFDPYNQVVVS 171 (495)
T ss_dssp TTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHH-HHHHHHH-HHHHHHHHHHHHHTTSCBCHHHHHHHH
T ss_pred cCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhH-HHHHHHH-HHHHHHHHHHhccCCCccchHHHHHHH
Confidence 35788777 6999999999999987532 22 1 44 6888888 599999997655556789999999999
Q ss_pred HHHHHHHHhhcCCCCC
Q 036716 163 TFDNICMSVLGIDPNY 178 (208)
Q Consensus 163 ~~~~i~~~~fg~~~~~ 178 (208)
++|+|++++||.+++.
T Consensus 172 ~~dvi~~~~fG~~~~~ 187 (495)
T 2hi4_A 172 VANVIGAMCFGQHFPE 187 (495)
T ss_dssp HHHHHHHHHHGGGSCT
T ss_pred HHHHHHHHHcCCCCCC
Confidence 9999999999998764
No 12
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.89 E-value=4.4e-23 Score=165.37 Aligned_cols=166 Identities=12% Similarity=0.111 Sum_probs=134.6
Q ss_pred CCCCccccchHHHHHcccchHHHHHHHHHHcC-CceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhhh
Q 036716 16 FKRSSRTRMLSTLVLNAHQLHEFATRVLQKSR-GTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEP 94 (208)
Q Consensus 16 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~ 94 (208)
|.++|++||++.+... .+..+.+++++|| +++++ ++++.++|+++||+++++++.++...+.+++.+......
T Consensus 9 p~~~P~iG~~~~~~~~---~~~~~~~~~~~yG~~i~~~---~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~ 82 (450)
T 3gw9_A 9 PVTVPILGHIIQFGKS---PLGFMQECKRQLKSGIFTI---NIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPV 82 (450)
T ss_dssp CCCSTTTBTHHHHHHC---HHHHHHHHHHHHTCSEEEE---EETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHHH
T ss_pred CCCcchhccHHHHccC---HHHHHHHHHHHhCCCeEEE---EECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHHH
Confidence 3449999999998654 7888999999999 99999 889999999999999999998876777777665544466
Q ss_pred ccCcccc-cCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHH-HHhhhhccCCcccHHHHHHHHHHHHHHHHhh
Q 036716 95 FGDGVFA-ADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIP-VLDHASEVGIKVDLQDVFQRFTFDNICMSVL 172 (208)
Q Consensus 95 ~g~~i~~-~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~-~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~f 172 (208)
+|.++++ .+|+.|+++|++++++|+.+.++.+ .+.++++ ++.+++ .+.+ .++++|+.+.+..+++|++++++|
T Consensus 83 ~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~-~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~~~~f 157 (450)
T 3gw9_A 83 FGEGVAYAAPYPRMREQLNFLAEELTIAKFQNF-VPAIQHE-VRKFMAANWDK---DEGEINLLEDCSTMIINTACQCLF 157 (450)
T ss_dssp HCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTH-HHHHHHH-HHHHHHHHSCS---SEEEEEHHHHHHHHHHHHHHHHHS
T ss_pred hcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHH-HHHHHHH-HHHHHHHHhcc---CCCcccHHHHHHHHHHHHHHHHHc
Confidence 7888766 4799999999999999999999997 5888888 588877 5542 345799999999999999999999
Q ss_pred cCCCCCCCCCCCchHHHHHHHHH
Q 036716 173 GIDPNYLSFEFPQVAYANAFNAT 195 (208)
Q Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~ 195 (208)
|.+++... +..++.+.+..+
T Consensus 158 G~~~~~~~---~~~~~~~~~~~~ 177 (450)
T 3gw9_A 158 GEDLRKRL---DARRFAQLLAKM 177 (450)
T ss_dssp CHHHHHHS---CHHHHHHHHHHH
T ss_pred Ccchhhhh---hhHHHHHHHHHH
Confidence 98775432 134455555443
No 13
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.88 E-value=1.4e-22 Score=163.28 Aligned_cols=150 Identities=11% Similarity=0.072 Sum_probs=128.9
Q ss_pred CCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh-hhcc
Q 036716 18 RSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPFG 96 (208)
Q Consensus 18 ~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~-~~~g 96 (208)
++|++||++++.++ ++.++.++++|||+||++ ++++.++|+++||+++++++.++...+.+++.+.... ..+|
T Consensus 19 ~lP~iG~~~~~~~~---~~~~~~~~~~kYG~i~~~---~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~~g 92 (461)
T 3ld6_A 19 PIPFLGHAIAFGKS---PIEFLENAYEKYGPVFSF---TMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFG 92 (461)
T ss_dssp SSTTTBTHHHHHHC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHHC
T ss_pred CcCeeeeHHHhhhC---HHHHHHHHHHHhCCEEEE---EECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhccCC
Confidence 38999999998754 788999999999999999 9999999999999999999988867788887666555 6778
Q ss_pred Ccccc-cCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhcCC
Q 036716 97 DGVFA-ADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGID 175 (208)
Q Consensus 97 ~~i~~-~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg~~ 175 (208)
+++++ .+|+.|+++|++++++|+...++++ .+.++++ ++.+++.+. +++++|+.+.+..+++++++.++||.+
T Consensus 93 ~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~fG~~ 166 (461)
T 3ld6_A 93 KGVAYDVPNPVFLEQKKMLKSGLNIAHFKQH-VSIIEKE-TKEYFESWG----ESGEKNVFEALSELIILTASHCLHGKE 166 (461)
T ss_dssp TTSGGGSCHHHHHHHHHHHHHHSSHHHHHHH-HHHHHHH-HHHHGGGGC----SEEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred CccccCCCcHHHHHHHHhccccccHHHHhhh-hHHHHHH-HHHHHHHHh----hcCCccHHHHHHHHHHHHHHHHHcCcc
Confidence 87765 6799999999999999999999997 5888887 477777664 344689999999999999999999987
Q ss_pred CCCC
Q 036716 176 PNYL 179 (208)
Q Consensus 176 ~~~~ 179 (208)
++..
T Consensus 167 ~~~~ 170 (461)
T 3ld6_A 167 IRSQ 170 (461)
T ss_dssp HHHT
T ss_pred hhhh
Confidence 7543
No 14
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.88 E-value=4e-22 Score=161.43 Aligned_cols=157 Identities=11% Similarity=0.127 Sum_probs=125.2
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEP 94 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~ 94 (208)
||+++|++|++..+......++..+.+++++||+++++ ++|+.++++++||+++++|+.++...|.+++........
T Consensus 16 gP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~---~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~~~~ 92 (481)
T 3czh_A 16 GPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSL---DLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKM 92 (481)
T ss_dssp CCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEE---EETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHHHHH
T ss_pred CCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHHHhh
Confidence 78889999999988643222788899999999999998 888889999999999999998875678776533222222
Q ss_pred c-cCccc-ccCChhHHHHHHhhhcccchhHH--HHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHH
Q 036716 95 F-GDGVF-AADGNLWKMQRKMIHSVMKHNKF--ESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMS 170 (208)
Q Consensus 95 ~-g~~i~-~~~g~~w~~~Rk~l~~~f~~~~l--~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~ 170 (208)
. +.+++ ..+|+.|+++|++++++|+...+ ..+ ++.++++ ++.+++.+.+. .++++|+.+.+..+++|+|+.+
T Consensus 93 ~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~-~~~i~~~-~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~ 168 (481)
T 3czh_A 93 TKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSF-ESKILEE-TKFFNDAIETY--KGRPFDFKQLITNAVSNITNLI 168 (481)
T ss_dssp HTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTH-HHHHHHH-HHHHHHHHHTT--TTCCBCCHHHHHHHHHHHHHHH
T ss_pred cCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHH-HHHHHHH-HHHHHHHHHHc--CCCCcCHHHHHHHHHHHHHHHH
Confidence 2 34644 46899999999999999986544 454 6888888 59999988753 3457999999999999999999
Q ss_pred hhcCCCCC
Q 036716 171 VLGIDPNY 178 (208)
Q Consensus 171 ~fg~~~~~ 178 (208)
+||.+++.
T Consensus 169 ~fG~~~~~ 176 (481)
T 3czh_A 169 IFGERFTY 176 (481)
T ss_dssp HHSSCCCT
T ss_pred HcCCCCCC
Confidence 99998864
No 15
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.88 E-value=7e-23 Score=165.23 Aligned_cols=166 Identities=13% Similarity=0.110 Sum_probs=114.5
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCC-CCChhhhhhhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNY-PKGPDLRMILE 93 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~-~~~~~~~~~~~ 93 (208)
||+++|++||++.+..+ ++.++.++++ ||+++++ ++++.++++++||+++++|+.++ .| .+++.+.....
T Consensus 27 gP~~~P~iG~~~~~~~~---p~~~~~~l~~-yGpv~~~---~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~ 97 (467)
T 3dbg_A 27 AGGGVPLLGHGWRLARD---PLAFMSQLRD-HGDVVRI---KLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEG 97 (467)
T ss_dssp ECCCCSTTHHHHHHHHC---HHHHHHHHGG-GCSEEEE---EETTEEEEEECSHHHHHHHHHCT--TC------------
T ss_pred CCCCCCcccchHHhccC---HHHHHHHHHH-hCCEEEE---EeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHH
Confidence 78889999999999754 7778888877 9999999 88899999999999999999876 45 55544443335
Q ss_pred hcc-CcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhh
Q 036716 94 PFG-DGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVL 172 (208)
Q Consensus 94 ~~g-~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~f 172 (208)
.+| +++++.+|+.|+++|++++++|+.+.++.+ .+.++++ ++.+++.+. +++++|+.+.+..+++++++.++|
T Consensus 98 ~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~~~ 171 (467)
T 3dbg_A 98 LLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAY-GPIMEEE-AHALTERWQ----PGKTVDATSESFRVAVRVAARCLL 171 (467)
T ss_dssp ------------------CGGGHHHHSTTTSTTT-HHHHHHH-HHHHHHHSC----TTSCEEHHHHHHHHHHHHHHHHHS
T ss_pred hcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHH-HHHHHHH-HHHHHHHhc----cCCcCcHHHHHHHHHHHHHHHHHh
Confidence 567 889999999999999999999999999996 6888888 588888875 356799999999999999999999
Q ss_pred cCCCCCCCCCCCchHHHHHHHHHHHHH
Q 036716 173 GIDPNYLSFEFPQVAYANAFNATEQAV 199 (208)
Q Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (208)
|.+.+.. ....+.+.+..+...+
T Consensus 172 g~~~~~~----~~~~~~~~~~~~~~~~ 194 (467)
T 3dbg_A 172 RGQYMDE----RAERLCVALATVFRGM 194 (467)
T ss_dssp CSSCCHH----HHHHHHHHHHHHHHC-
T ss_pred CCcccch----hHHHHHHHHHHHHHHH
Confidence 9887641 2345555555554433
No 16
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.88 E-value=2e-22 Score=162.96 Aligned_cols=155 Identities=11% Similarity=0.107 Sum_probs=120.6
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhh-
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILE- 93 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~- 93 (208)
||+++|++|++..+. ..+++..+.+++++||+++++ ++|+.+.|+++||+++++|+.++.+.|.+++.......
T Consensus 15 gP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~---~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~ 89 (477)
T 1r9o_A 15 GPTPLPVIGNILQIG--IKDISKSLTNLSKVYGPVFTL---YFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERA 89 (477)
T ss_dssp CSSSCC-----CCBC--HHHHHHHHHHHHHHHCSEEEE---ESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTT
T ss_pred CCCCCceeccHhhcC--CCChHHHHHHHHHHhCCEEEE---EECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhc
Confidence 777899999997762 224778889999999999999 88888999999999999999766567776543221211
Q ss_pred hccCcccccCChhHHHHHHhhhcccchh--HHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHh
Q 036716 94 PFGDGVFAADGNLWKMQRKMIHSVMKHN--KFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSV 171 (208)
Q Consensus 94 ~~g~~i~~~~g~~w~~~Rk~l~~~f~~~--~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~ 171 (208)
..|.++++++|+.|+++||+++++|+.. .++.+ .+.+.++ ++.+++.+.+. .++++|+.+.+..+++|+|++++
T Consensus 90 ~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~-~~~i~~~-~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~~ 165 (477)
T 1r9o_A 90 NRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSI-EDRVQEE-ARCLVEELRKT--KASPCDPTFILGCAPCNVICSII 165 (477)
T ss_dssp TCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCH-HHHHHHH-HHHHHHHHHTT--TTSCBCTHHHHHHHHHHHHHHHH
T ss_pred cCCCceEecCChHHHHHHHHHHHHHHHhCCChHHH-HHHHHHH-HHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHHH
Confidence 2457888889999999999999999876 34554 5788888 59999988753 34679999999999999999999
Q ss_pred hcCCCCC
Q 036716 172 LGIDPNY 178 (208)
Q Consensus 172 fg~~~~~ 178 (208)
||.+++.
T Consensus 166 fG~~~~~ 172 (477)
T 1r9o_A 166 FHKRFDY 172 (477)
T ss_dssp HSCCCCT
T ss_pred ccCcCCC
Confidence 9998874
No 17
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.87 E-value=1.1e-21 Score=154.98 Aligned_cols=161 Identities=12% Similarity=0.124 Sum_probs=131.1
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCCh-hhhhhhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGP-DLRMILE 93 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~-~~~~~~~ 93 (208)
++..+|++||++.+.. +++..+.+++++||++++ . +++.++++++||+++++|+.++ .|.+++ .+.....
T Consensus 3 ~~~~~p~iGnl~~~~~---~p~~~~~~l~~~yGpv~~-~---~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~ 73 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQ---DPLAVLLAWGRAHPRLFL-P---LPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSR 73 (389)
T ss_dssp ECCHHHHHHHHHHHHH---CHHHHHHHHHHHCSEEEE-C---CTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHH
T ss_pred ccccccccccHHHHhh---ChHHHHHHHHHHcCCeeE-e---cCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHH
Confidence 3566799999998864 377889999999999876 2 3677899999999999999876 688876 4433335
Q ss_pred hccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhc
Q 036716 94 PFGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLG 173 (208)
Q Consensus 94 ~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg 173 (208)
.+|+++++++|+.|+++|++++++|+++.++.+ .+.++++ ++.+++.+. ++++|+.+.+..+++|+|++++||
T Consensus 74 ~~g~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG 146 (389)
T 1n97_A 74 LTGRGLLTDWGESWKEARKALKDPFLPKNVRGY-REAMEEE-ARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFG 146 (389)
T ss_dssp HHCSSTTTCCHHHHHHHHHHHCGGGSHHHHHTT-HHHHHHH-HHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred HhCCccccCCcHHHHHHHHHhCcccCHHHHHHH-HHHHHHH-HHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcC
Confidence 568899999999999999999999999999996 6888888 588888875 457999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHH
Q 036716 174 IDPNYLSFEFPQVAYANAFNATEQAV 199 (208)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (208)
.+.+. ++.+.+..+...+
T Consensus 147 ~~~~~--------~~~~~~~~~~~~~ 164 (389)
T 1n97_A 147 KPLSP--------SLAEHALKALDRI 164 (389)
T ss_dssp SCCCH--------HHHHHHHHHHHHH
T ss_pred CcchH--------HHHHHHHHHHHHH
Confidence 88751 4555555555443
No 18
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.87 E-value=5.1e-21 Score=153.80 Aligned_cols=159 Identities=17% Similarity=0.273 Sum_probs=128.9
Q ss_pred cchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhh-hhh-----hhccCccccc-CCh
Q 036716 33 HQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLR-MIL-----EPFGDGVFAA-DGN 105 (208)
Q Consensus 33 ~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~-~~~-----~~~g~~i~~~-~g~ 105 (208)
..++..+.+++++||+++++ ++|+.++|+++||+++++|+.++ .+.+++... ... ..+|.++++. +|+
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~---~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 84 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRV---NVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYE 84 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHH
T ss_pred chHHHHHHHHHHHhCCeEEE---EeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChH
Confidence 35788889999999999999 88999999999999999999753 566665432 221 2346777765 799
Q ss_pred hHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 036716 106 LWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIDPNYLSFEFPQ 185 (208)
Q Consensus 106 ~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~ 185 (208)
.|+++||+++++|+.+.++.+ .+.++++ ++.+++.+.+..+.+.++|+.+.+..+++|+|+.++||.+++..++ ..
T Consensus 85 ~w~~~Rr~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~--~~ 160 (456)
T 3mdm_A 85 RWHKQRRVIDLAFSRSSLVSL-METFNEK-AEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLG--AQ 160 (456)
T ss_dssp HHHHHHHHHGGGGSHHHHHTT-HHHHHHH-HHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGT--CC
T ss_pred HHHHHHhhcccccCHHHHHHH-HHHHHHH-HHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcc--cc
Confidence 999999999999999999996 5889888 5999999987665667899999999999999999999999987654 34
Q ss_pred hHHHHHHHHHHHHHH
Q 036716 186 VAYANAFNATEQAVF 200 (208)
Q Consensus 186 ~~~~~~~~~~~~~~~ 200 (208)
.++.+.+..+...+.
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (456)
T 3mdm_A 161 KPLSQAVKLMLEGIT 175 (456)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 566666666655443
No 19
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.87 E-value=5.8e-22 Score=160.00 Aligned_cols=158 Identities=13% Similarity=0.134 Sum_probs=122.5
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh--
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-- 92 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~-- 92 (208)
||+++|++||++++.. .+.+..+.+++++||+||++ ++|+.++|+++||+++++|+.++...|..++......
T Consensus 14 GP~~lP~iGn~~~~~~--~~~~~~~~~~~~kYG~i~~~---~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~~ 88 (479)
T 3tbg_A 14 GPLPLPGLGNLLHVDF--QNTPYCFDQLRRRFGDVFSL---QLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQIL 88 (479)
T ss_dssp CSCCBTTTBTGGGCCT--TSHHHHHHHHHHHHCSEEEE---EETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGGG
T ss_pred CCCCcCcccchHhhcC--CCHHHHHHHHHHHhCCEEEE---EECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHHh
Confidence 7889999999988743 35788889999999999999 9999999999999999999988767777655322221
Q ss_pred --hhccCcccc-cCChhHHHHHHhhhcccchhHHHH-HHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHH
Q 036716 93 --EPFGDGVFA-ADGNLWKMQRKMIHSVMKHNKFES-ALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNIC 168 (208)
Q Consensus 93 --~~~g~~i~~-~~g~~w~~~Rk~l~~~f~~~~l~~-~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~ 168 (208)
...+.++++ .+|+.|+++|+.+++.|+...+.. .++..+... ...+.+.+... .+..+|+.+.+..+++|+++
T Consensus 89 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 165 (479)
T 3tbg_A 89 GFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEE-AACLCAAFANH--SGRPFRPNGLLDKAVSNVIA 165 (479)
T ss_dssp TCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHH-HHHHHHHHHTT--TTCCBCTHHHHHHHHHHHHH
T ss_pred ccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHH-HHHHHHHHHhc--cCCcccHHHHHHHHHHHHHH
Confidence 223455555 459999999999999998766543 234555555 46666655532 35579999999999999999
Q ss_pred HHhhcCCCCCCC
Q 036716 169 MSVLGIDPNYLS 180 (208)
Q Consensus 169 ~~~fg~~~~~~~ 180 (208)
.++||.+++..+
T Consensus 166 ~~~fg~~~~~~~ 177 (479)
T 3tbg_A 166 SLTCGRRFEYDD 177 (479)
T ss_dssp HHHHSCCCCTTC
T ss_pred HhhcCCcccccc
Confidence 999999987654
No 20
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.86 E-value=2e-21 Score=156.35 Aligned_cols=151 Identities=11% Similarity=0.095 Sum_probs=127.6
Q ss_pred CCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh-hh
Q 036716 16 FKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EP 94 (208)
Q Consensus 16 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~-~~ 94 (208)
|+++|++||++.+... ++.++.+++++||+++++ ++++.+.+++++|+++++++.++...+.++..+.... ..
T Consensus 17 P~~lP~iG~l~~~~~~---~~~~~~~~~~~yG~v~~l---~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 90 (461)
T 3i3k_A 17 FSPIPFLGHAIAFGKS---PIEFLENAYEKYGPVFSF---TMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPV 90 (461)
T ss_dssp CCSSTTTBTHHHHHHC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHH
T ss_pred CCCCCccccHHhhccC---HHHHHHHHHHHhCCEEEE---EecCceEEEEeChHHHHHHHhccccccccchHHHHhhhhh
Confidence 7789999999998754 788899999999999999 8899999999999999999988756667666555443 56
Q ss_pred ccCccccc-CChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhc
Q 036716 95 FGDGVFAA-DGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLG 173 (208)
Q Consensus 95 ~g~~i~~~-~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg 173 (208)
+|+++++. +|+.|+++||++++.|+...++.+ .+.++++ ++.+++.|.+ ++.+|+.+.+..++++++++++||
T Consensus 91 ~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~-~~~~~~~-~~~ll~~l~~----~~~~dl~~~~~~~~~~~~~~~~~G 164 (461)
T 3i3k_A 91 FGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQH-VSIIEKE-TKEYFESWGE----SGEKNVFEALSELIILTASHCLHG 164 (461)
T ss_dssp HCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHH-HHHHHHH-HHHHGGGGCS----EEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred cCCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHH-HHHHHHH-HHHHHHHhhh----cCCcCHHHHHHHHHHHHHHHHHcc
Confidence 78888775 699999999999999999999997 4888887 5877777642 335899999999999999999999
Q ss_pred CCCCC
Q 036716 174 IDPNY 178 (208)
Q Consensus 174 ~~~~~ 178 (208)
.++..
T Consensus 165 ~~~~~ 169 (461)
T 3i3k_A 165 KEIRS 169 (461)
T ss_dssp HHHHH
T ss_pred Hhhhh
Confidence 87643
No 21
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.86 E-value=2.1e-21 Score=155.77 Aligned_cols=145 Identities=12% Similarity=0.087 Sum_probs=120.4
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEP 94 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~ 94 (208)
||+++|++|++..+..+ .. .+.+++++||+++++ ++++.+.++++||+++++|+.++...|..+ ........
T Consensus 16 gp~~~P~iG~~~~~~~~---~~-~~~~~~~~yg~v~~~---~~~g~~~vvv~~~~~~~~il~~~~~~~~~~-~~~~~~~~ 87 (444)
T 2ve3_A 16 GDFGLPWLGETLNFLND---GD-FGKKRQQQFGPIFKT---RLFGKNVIFISGALANRFLFTKEQETFQAT-WPLSTRIL 87 (444)
T ss_dssp CCCCBTTTBTHHHHHHC---TT-HHHHHHHHHCSSEEE---EETTEEEEEECSHHHHHHHTSSCTTTEEEE-CCHHHHHH
T ss_pred CCCCCCccccHHHHhcC---cH-HHHHHHHHcCCeEEE---eeCCCCEEEEcCHHHHHHHHhCCCcccccc-hhHHHHHH
Confidence 78889999999998754 34 677999999999999 767788999999999999998764445522 11222244
Q ss_pred ccC-cccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhc
Q 036716 95 FGD-GVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLG 173 (208)
Q Consensus 95 ~g~-~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg 173 (208)
+|. ++++.+|+.|+++|++++++|+.++++.+ .+.++++ ++.+++.|. .++++|+.+.+..+++|++++++||
T Consensus 88 ~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~l~----~~~~vd~~~~~~~~~~~vi~~~~fG 161 (444)
T 2ve3_A 88 LGPNALATQMGEIHRSRRKILYQAFLPRTLDSY-LPKMDGI-VQGYLEQWG----KANEVIWYPQLRRMTFDVAATLFMG 161 (444)
T ss_dssp HCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTT-HHHHHHH-HHHHHHHHH----HSSEEEHHHHHHHHHHHHHHHHHTC
T ss_pred hCccccccCCchHHHHHHHHHHhhcCHHHHHHH-HHHHHHH-HHHHHHHhc----CCCcEeHHHHHHHHHHHHHHHHHcC
Confidence 565 88889999999999999999999999997 5889888 599998885 3567999999999999999999999
No 22
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.86 E-value=1.2e-21 Score=157.62 Aligned_cols=163 Identities=13% Similarity=0.162 Sum_probs=112.2
Q ss_pred CCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhhhc
Q 036716 16 FKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPF 95 (208)
Q Consensus 16 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~ 95 (208)
|+++|++||+..+.. +++..+.+++++||+++++ ++++.++++++||+++++|+.++...|.+++.+......+
T Consensus 10 p~~~P~iG~~~~~~~---~~~~~~~~l~~~yG~v~~~---~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 10 SGGHDEHGHLEEFRT---DPIGLMQRVRDELGDVGTF---QLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp SCCCBTTBTHHHHTT---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCccCHHHHhh---ChHHHHHHHHHHcCCEEEE---EeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 668999999998843 4788899999999999998 8888899999999999999987645677766543232455
Q ss_pred cCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhcCC
Q 036716 96 GDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGID 175 (208)
Q Consensus 96 g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg~~ 175 (208)
|.+++ .+|+.|+++|++++++|+.++++.+ .+.++++ ++.+++.+.+ ++++|+.+.+..+++|+|++++||.+
T Consensus 84 g~~~~-~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~~~~----~~~vd~~~~~~~~~~~vi~~~~fG~~ 156 (455)
T 2cib_A 84 GEGVV-FDASPERRKEMLHNAALRGEQMKGH-AATIEDQ-VRRMIADWGE----AGEIDLLDFFAELTIYTSSACLIGKK 156 (455)
T ss_dssp C---------------------CCHHHHHHH-HHHHHHH-HHHHHTTCCS----EEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred CCccc-cCcHHHHHHHhhhccccCHHHHHHH-HHHHHHH-HHHHHHHhCC----CCcEeHHHHHHHHHHHHHHHHHcCCC
Confidence 66654 5799999999999999999999997 5888888 5888877642 34799999999999999999999988
Q ss_pred CCCCCCCCCchHHHHHHHHH
Q 036716 176 PNYLSFEFPQVAYANAFNAT 195 (208)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~ 195 (208)
++... +.++.+.+..+
T Consensus 157 ~~~~~----~~~~~~~~~~~ 172 (455)
T 2cib_A 157 FRDQL----DGRFAKLYHEL 172 (455)
T ss_dssp HHTTC----CHHHHHHHHHH
T ss_pred cchhh----hHHHHHHHHHH
Confidence 75422 23455544433
No 23
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.84 E-value=1.1e-21 Score=159.24 Aligned_cols=136 Identities=15% Similarity=0.205 Sum_probs=114.5
Q ss_pred ccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhh-hccC-cccccC-ChhHH
Q 036716 32 AHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILE-PFGD-GVFAAD-GNLWK 108 (208)
Q Consensus 32 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~-~~g~-~i~~~~-g~~w~ 108 (208)
.++++..+.+++++||+++++ ++|+.++|+++||+++++|+.++.+.|.+++....... ..+. ++++++ |+.|+
T Consensus 42 ~~~~~~~~~~l~~~yG~v~~~---~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~ 118 (496)
T 3qz1_A 42 QPNLPIHLLSLTQKLGPVYRL---RLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWK 118 (496)
T ss_dssp SSCHHHHHHHGGGTSCSEEEE---CSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHH
T ss_pred CCcchHHHHHHHHHhCCEEEE---EeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHH
Confidence 346888999999999999999 99999999999999999999888677887765443332 2344 899999 99999
Q ss_pred HHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhcC
Q 036716 109 MQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGI 174 (208)
Q Consensus 109 ~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg~ 174 (208)
++||+++++|+...++.+ ++.++++ ++.+++.+.+ +.++++|+.+.+..+++|+|+.++||.
T Consensus 119 ~~Rr~~~~~f~~~~~~~~-~~~i~~~-~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi~~~~fG~ 180 (496)
T 3qz1_A 119 AHKKLTRSALLLGTRSSM-EPWVDQL-TQEFCERMRV--QAGAPVTIQKEFSLLTCSIICYLTFGN 180 (496)
T ss_dssp HHHHHHHHHHHC--CCCH-HHHHHHH-HHHHHHHHHT--TCSCCCHHHHHHTHHHHHHTTTTSTTC
T ss_pred HHHHHHHHHHhhccHhhH-HHHHHHH-HHHHHHHHHh--cCCCccCHHHHHHHHHHHHHHHHhcCC
Confidence 999999999997666675 6899988 5999999975 346689999999999999999999998
No 24
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.84 E-value=3.2e-20 Score=148.61 Aligned_cols=150 Identities=9% Similarity=0.062 Sum_probs=117.4
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChhh--hhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPDL--RMI 91 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~--~~~ 91 (208)
||+++|++|++...... +++..+.++ ++||+++++ ++ ++.++++++||+++++|+.++ .|.+++.. ...
T Consensus 30 GP~~~p~lG~~~~~~~~--~p~~~~~~l-~~yGpv~~~---~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~ 101 (436)
T 2cd8_A 30 ASPPVLDLGALGQDFAA--DPYPTYARL-RAEGPAHRV---RTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPL 101 (436)
T ss_dssp ----CCBHHHHHHHHHH--CCHHHHHHH-HTTCSEEEE---ECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCC
T ss_pred CCCccccCCCCCccccc--ChHHHHHHH-HHhCCeeee---ccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccccc
Confidence 88999999998743322 467788888 899999999 76 778899999999999999876 57776531 111
Q ss_pred h---hhccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHH
Q 036716 92 L---EPFGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNI 167 (208)
Q Consensus 92 ~---~~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i 167 (208)
. ...++++++.+|+.|+++||+++++|+.+.++.+ .+.++++ ++.+++.|.+ +.++++|+.+.+ ..+++|+|
T Consensus 102 ~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~vi 177 (436)
T 2cd8_A 102 TEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELL-RPRVQEI-VDGLVDAMLA--APDGRADLMESLAWPLPITVI 177 (436)
T ss_dssp CTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHTT-HHHHHHH-HHHHHHHHHT--CTTSCEEHHHHTTTHHHHHHH
T ss_pred ccccccccccccccCchHHHHHHHHhHHhhCHHHHHHH-HHHHHHH-HHHHHHHHHh--ccCCCcchHHHHHHHHHHHHH
Confidence 1 2346788889999999999999999999999996 6899988 5999999874 125679999876 58999999
Q ss_pred HHHhhcCCCC
Q 036716 168 CMSVLGIDPN 177 (208)
Q Consensus 168 ~~~~fg~~~~ 177 (208)
+. +||.+.+
T Consensus 178 ~~-~~G~~~~ 186 (436)
T 2cd8_A 178 SE-LLGVPEP 186 (436)
T ss_dssp HH-HHTCCGG
T ss_pred HH-HhCCCHH
Confidence 98 6998653
No 25
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.83 E-value=1.9e-19 Score=143.27 Aligned_cols=149 Identities=11% Similarity=0.133 Sum_probs=119.7
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcC-CceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhh-hhhh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSR-GTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDL-RMIL 92 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~-~~~~ 92 (208)
.|++.|++|+++.+..+ ++.++.+++++|| +++++ ++++.+++++++|++++.++. . ..|.+.+.+ ....
T Consensus 4 p~Pg~P~lG~~~~~~~~---p~~~~~~l~~~yg~pv~~~---~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~ 75 (417)
T 1izo_A 4 QIPHDKSLDNSLTLLKE---GYLFIKNRTERYNSDLFQA---RLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQ 75 (417)
T ss_dssp --CBCCCTTHHHHHHHH---GGGHHHHHHHHTTSSEEEE---EETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHH
T ss_pred CCCCCCccchHHHHhhC---cHHHHHHHHHHhCCCeEEe---ecCCccEEEECCHHHHHHHhc-c-cccccccccccchh
Confidence 46777999999998754 6778999999998 89999 777889999999999986554 3 345554322 2222
Q ss_pred -hhcc-CcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHH
Q 036716 93 -EPFG-DGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMS 170 (208)
Q Consensus 93 -~~~g-~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~ 170 (208)
..+| +++++.+|+.|+++|++++++|+++.++.+ .+.+++. ++.+++.|.+ ++++|+.+.+..+++++|+++
T Consensus 76 ~~~~g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~ 149 (417)
T 1izo_A 76 KSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRL-AELMTEE-WKAAVTRWEK----ADEVVLFEEAKEILCRVACYW 149 (417)
T ss_dssp TTTTCTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHH-HHHHHHH-HHHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH
T ss_pred hhhccccceeecCChHHHHHHHHhhhhcCHHHHHHH-HHHHHHH-HHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH
Confidence 4566 578889999999999999999999999997 6889888 5889888853 567999999999999999998
Q ss_pred hhcCCCCC
Q 036716 171 VLGIDPNY 178 (208)
Q Consensus 171 ~fg~~~~~ 178 (208)
||.+.+.
T Consensus 150 -~G~~~~~ 156 (417)
T 1izo_A 150 -AGVPLKE 156 (417)
T ss_dssp -HTCCCCT
T ss_pred -cCCCCCc
Confidence 6987654
No 26
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.81 E-value=3.3e-19 Score=141.83 Aligned_cols=148 Identities=13% Similarity=0.154 Sum_probs=116.9
Q ss_pred CCCCccccchHHHHHcccchHHHHHHHHHHc-CCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhh-hhh-
Q 036716 16 FKRSSRTRMLSTLVLNAHQLHEFATRVLQKS-RGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLR-MIL- 92 (208)
Q Consensus 16 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~-~~~- 92 (208)
|++.|++|+++.+..+ ++.++.+++++| |+++++ ..++.+.+++++|+.++ ++.+. ..|.+++.+. ...
T Consensus 4 pPg~P~iG~~~~~~~~---p~~~~~~l~~~y~gpv~~~---~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~ 75 (415)
T 3awm_A 4 TPHTKGPDETLSLLAD---PYRFISRQCQRLGANAFES---RFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQK 75 (415)
T ss_dssp -----CCCCHHHHHHS---TTTHHHHHHHHHTSSEEEE---EETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHT
T ss_pred CCCCCccchHHHHHhC---hHHHHHHHHHHhCCCeEEE---ecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhh
Confidence 6677999999998754 677889999999 799998 66678899999999987 66554 4566654322 122
Q ss_pred hhcc-CcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHh
Q 036716 93 EPFG-DGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSV 171 (208)
Q Consensus 93 ~~~g-~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~ 171 (208)
..+| ++++..+|+.|+++|++++++|+++.++.+ .+.+++. ++.+++.|.+ ++++|+.+.+..+++++|+++
T Consensus 76 ~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~- 148 (415)
T 3awm_A 76 TLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRAL-AQLFEAE-WRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW- 148 (415)
T ss_dssp TTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHH-HHHHHHH-HHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-
T ss_pred hccCCcceeecCcHHHHHHHHHHHHhcCHHHHHHH-HHHHHHH-HHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-
Confidence 4556 678889999999999999999999999997 6899888 5999998863 347999999999999999999
Q ss_pred hcCCCCC
Q 036716 172 LGIDPNY 178 (208)
Q Consensus 172 fg~~~~~ 178 (208)
||.+.+.
T Consensus 149 ~G~~~~~ 155 (415)
T 3awm_A 149 AGVPLPD 155 (415)
T ss_dssp HTCCCCG
T ss_pred cCCCCCc
Confidence 8987653
No 27
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.80 E-value=1.5e-19 Score=146.60 Aligned_cols=155 Identities=10% Similarity=0.082 Sum_probs=122.3
Q ss_pred cCCC-CccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh-
Q 036716 15 SFKR-SSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL- 92 (208)
Q Consensus 15 ~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~- 92 (208)
||++ +|++||++.+.. +++.++.+++++||+++++ ++++.+++++++|+++++++.++ +.+..........
T Consensus 17 gp~~~lPliG~~~~~~~---~p~~~~~~l~~~yGpv~~~---~lg~~~~vvv~~p~~v~~vl~~~-~~~~~~~~~~~~~~ 89 (491)
T 3v8d_A 17 LENGLIPYLGCALQFGA---NPLEFLRANQRKHGHVFTC---KLMGKYVHFITNPLSYHKVLCHG-KYFDWKKFHFALSA 89 (491)
T ss_dssp EEEEEESSTTTTGGGTC---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECCGGGHHHHHSCC-TTEESSHHHHHHHH
T ss_pred CCCCCcceeccHHHHhc---CHHHHHHHHHHHcCCceEE---EECCEEEEEEcCHHHHHHHHhcC-CccchHHHHHHHHH
Confidence 6677 699999999853 4889999999999999999 88999999999999999999766 3344444333333
Q ss_pred hhccCccc-ccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhc---cCCcccHHHHHHHHHHHHHH
Q 036716 93 EPFGDGVF-AADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASE---VGIKVDLQDVFQRFTFDNIC 168 (208)
Q Consensus 93 ~~~g~~i~-~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~---~~~~vd~~~~~~~~~~~~i~ 168 (208)
..+|.+.. ..+|+.|+++|+.++++|+.+.++.+ .+.+.++ ++.+++.+..... ....+++.+.+..+++++++
T Consensus 90 ~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~-~~~i~~~-~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 167 (491)
T 3v8d_A 90 KAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSL-TESMMEN-LQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGY 167 (491)
T ss_dssp HHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHH-HHHHHHH-HHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHH
T ss_pred HhcCCcccccccchhHHHHHHHHHHHcCccchHHH-HHHHHHH-HHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHH
Confidence 66675554 45799999999999999999999997 5788777 4777764422211 23467999999999999999
Q ss_pred HHhhcCCCCC
Q 036716 169 MSVLGIDPNY 178 (208)
Q Consensus 169 ~~~fg~~~~~ 178 (208)
.++||.+.+.
T Consensus 168 ~~~fG~~~~~ 177 (491)
T 3v8d_A 168 LTIFGRDLTR 177 (491)
T ss_dssp HHHHCBCCSC
T ss_pred HHHcCccccc
Confidence 9999988764
No 28
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.76 E-value=1e-17 Score=132.75 Aligned_cols=151 Identities=11% Similarity=0.063 Sum_probs=114.7
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccC-cccEEEecChhHHHHhhhcCC-CCCCCChhhhhh-
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFA-KMDFIITSDPMNVHYISSKNF-SNYPKGPDLRMI- 91 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~-~~~~v~v~~p~~~~~i~~~~~-~~~~~~~~~~~~- 91 (208)
||+++|++|++.. +++..+.++. +||+++++ .++ +.+.+++++++.+++++.++. +.+..++.+...
T Consensus 5 Gp~~~P~~g~~~~------~p~~~~~~l~-~~Gpv~~~---~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~ 74 (404)
T 1jfb_A 5 GAPSFPFSRASGP------EPPAEFAKLR-ATNPVSQV---KLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS 74 (404)
T ss_dssp -CCBSSCCCSSTT------SCCTHHHHHH-HHCSEEEE---ECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred CCCCCCCCCCcCC------CccHHHHHHH-HhCCeeee---ecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence 7889999999864 3566677774 69999988 543 556777899999999998752 222222221111
Q ss_pred ----hhhc-cCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHH
Q 036716 92 ----LEPF-GDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDN 166 (208)
Q Consensus 92 ----~~~~-g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~ 166 (208)
.... +.++++++|+.|+++||+++++|++++++.+ .+.++++ ++.+++.|.+..+.++++|+.+.+...+.++
T Consensus 75 ~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~ 152 (404)
T 1jfb_A 75 ASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNL-QPYIQRT-VDDLLEQMKQKGCANGPVDLVKEFALPVPSY 152 (404)
T ss_dssp HHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHH-HHHHHHH-HHHHHHHHHHHCSTTSCEEHHHHTTTHHHHH
T ss_pred ccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHH-HHHHHHH-HHHHHHHHHhcCCCCCCccHHHHHHHHHHHH
Confidence 0122 3578888999999999999999999999996 6899998 5999999976543456799999999999999
Q ss_pred HHHHhhcCCCC
Q 036716 167 ICMSVLGIDPN 177 (208)
Q Consensus 167 i~~~~fg~~~~ 177 (208)
++..+||.+.+
T Consensus 153 i~~~~~G~~~~ 163 (404)
T 1jfb_A 153 IIYTLLGVPFN 163 (404)
T ss_dssp HHHHHHTCCGG
T ss_pred HHHHHcCCCHH
Confidence 99999998653
No 29
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.75 E-value=7.6e-18 Score=133.65 Aligned_cols=142 Identities=16% Similarity=0.128 Sum_probs=110.3
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEeccc----c-Cc-ccEEEecChhHHHHhh-hcCCCCCCCChh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPW----F-AK-MDFIITSDPMNVHYIS-SKNFSNYPKGPD 87 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~----~-~~-~~~v~v~~p~~~~~i~-~~~~~~~~~~~~ 87 (208)
||+++|+. + ..+++..+.++ ++||+++++ + + ++ .++++++||+++++|+ .++ .+.+++.
T Consensus 14 gp~~~p~~-----~---~~~p~~~~~~l-~~yGpv~~~---~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~ 79 (406)
T 1ued_A 14 EPANFQLR-----T---NCDPHEDNFGL-RAHGPLVRI---VGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQ 79 (406)
T ss_dssp CCTTTTCE-----E---TTEECHHHHHH-HTTCSEEEE---ESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCC
T ss_pred cCcccCCC-----C---CCCcHHHHHHH-HHhCCeeee---cccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccccc
Confidence 57788766 1 23467788888 999999999 7 5 77 8999999999999999 543 3555432
Q ss_pred --hh--hhh-h-hccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHH
Q 036716 88 --LR--MIL-E-PFGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQR 161 (208)
Q Consensus 88 --~~--~~~-~-~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~ 161 (208)
+. ... . ..+.++++.+|+.|+++||+++++|+.+.++.+ .+.++++ ++.+++.+.+ .++++|+.+.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~g~~~d~~~~~~~ 154 (406)
T 1ued_A 80 FTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRM-EPAIQSL-IDDRLDLLEA---EGPSADLQGLFAD 154 (406)
T ss_dssp C---------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHH-HHHHHHH-HHHHHHHHHH---HCTTEEHHHHTHH
T ss_pred ccccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCeeHHHHHHH
Confidence 11 111 1 135678889999999999999999999999996 6899998 5999999873 3567999988765
Q ss_pred -HHHHHHHHHhhcCCC
Q 036716 162 -FTFDNICMSVLGIDP 176 (208)
Q Consensus 162 -~~~~~i~~~~fg~~~ 176 (208)
+++|+|+ .+||.+.
T Consensus 155 ~~~~~vi~-~~~G~~~ 169 (406)
T 1ued_A 155 PVGAHALC-ELLGIPR 169 (406)
T ss_dssp HHHHHHHH-HHHTCCH
T ss_pred HhHHHHHH-HHcCCCH
Confidence 9999999 4799764
No 30
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.74 E-value=1.3e-16 Score=129.58 Aligned_cols=153 Identities=10% Similarity=0.030 Sum_probs=110.2
Q ss_pred cCCC-CccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhh-h
Q 036716 15 SFKR-SSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMI-L 92 (208)
Q Consensus 15 ~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~-~ 92 (208)
||++ +|++||++.+..+ .+..+.+++++||++|++ ++|+.++++++||+++++++.++...+..++..... .
T Consensus 22 gp~~~~P~iG~~~~~~~~---~~~~~~~l~~kYG~i~~v---~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 95 (498)
T 3b6h_A 22 LDLGSIPWLGYALDFGKD---AASFLTRMKEKHGDIFTI---LVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLME 95 (498)
T ss_dssp EECCSSTTTBTHHHHHHC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHHH
T ss_pred CCCCCCcchhhHHHhccC---HHHHHHHHHHHcCCeEEE---EECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHHH
Confidence 6667 8999999998643 788999999999999999 889999999999999999998763323433332222 2
Q ss_pred hhccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhh-hccCCcccHHHHHHHHHHHHHHHHh
Q 036716 93 EPFGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHA-SEVGIKVDLQDVFQRFTFDNICMSV 171 (208)
Q Consensus 93 ~~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~-~~~~~~vd~~~~~~~~~~~~i~~~~ 171 (208)
..+|.+++..+|+.|+ ++..++|+.+.++.+. +.+.+.+ ...++..... ......+++.+.+..+++++++.++
T Consensus 96 ~~~g~~~~~~~~~~~r---r~~~~~~~~~~l~~~~-~~~~~~~-~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~~ 170 (498)
T 3b6h_A 96 RIFDVQLPHYSPSDEK---ARMKLTLLHRELQALT-EAMYTNL-HAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTL 170 (498)
T ss_dssp HTSCCCCTTCCHHHHH---HHHHTTSSHHHHHHHH-HHHHHHH-HHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCccccCHHHHH---HHHHHhhchHhHHHHH-HHHHHHH-HHHHhhcccccCCCcceecHHHHHHHHHHHHHHHhh
Confidence 5567777777788774 4555689888888875 3343332 3333332211 1122357899999999999999999
Q ss_pred hcCCCCC
Q 036716 172 LGIDPNY 178 (208)
Q Consensus 172 fg~~~~~ 178 (208)
||.+++.
T Consensus 171 fG~~~~~ 177 (498)
T 3b6h_A 171 YGIEALP 177 (498)
T ss_dssp HCBSCSS
T ss_pred cCccccc
Confidence 9988754
No 31
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.74 E-value=9.3e-18 Score=135.90 Aligned_cols=151 Identities=11% Similarity=0.096 Sum_probs=111.0
Q ss_pred CccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh-hhccC
Q 036716 19 SSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL-EPFGD 97 (208)
Q Consensus 19 ~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~-~~~g~ 97 (208)
+|++||++.+.. +++..+.+++++||+++++ ++|+.++++++||+++++++.++. .+..++...... ..+|.
T Consensus 22 ~P~iG~~~~~~~---~~~~~~~~~~~kyG~i~~~---~~g~~~~vvv~dp~~~~~il~~~~-~~~~~~~~~~~~~~~~g~ 94 (491)
T 3dax_A 22 IPYLGCALQFGA---NPLEFLRANQRKHGHVFTC---KLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFHFATSAKAFGH 94 (491)
T ss_dssp ESCTTTTGGGTC---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECCGGGTHHHHSCCT-TEESSHHHHHHHHHHHTC
T ss_pred ccchhhHHHHhh---CHHHHHHHHHHhcCCeEEE---EECCeEEEEEcChHHHHHHHcCCc-cCChHHHHHHHHHHHcCC
Confidence 799999988743 4788899999999999999 899999999999999999997762 233333222222 45677
Q ss_pred ccc-ccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhh---hccCCcccHHHHHHHHHHHHHHHHhhc
Q 036716 98 GVF-AADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHA---SEVGIKVDLQDVFQRFTFDNICMSVLG 173 (208)
Q Consensus 98 ~i~-~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~---~~~~~~vd~~~~~~~~~~~~i~~~~fg 173 (208)
+++ ..+|+.|+++|+.+.++|+.+.++.+. +.+.+.+ ..+++..... ......+++.+.+..+++++++.+.||
T Consensus 95 ~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~-~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~fG 172 (491)
T 3dax_A 95 RSIDPMDGNTTENINDTFIKTLQGHALNSLT-ESMMENL-QRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFG 172 (491)
T ss_dssp CCCCGGGTSBCCCHHHHHHHHHSHHHHHHHH-HHHHHHH-HHHHC----------CCEEEEHHHHHHHHHHHHHHHHHHC
T ss_pred CcccccchhHHHHHHHHHHHhcCcccHHHHH-HHHHHHH-HHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhHHHHcC
Confidence 766 678999999999999999999988875 4444442 4443332211 111235789999999999999999999
Q ss_pred CCCCC
Q 036716 174 IDPNY 178 (208)
Q Consensus 174 ~~~~~ 178 (208)
.+.+.
T Consensus 173 ~~~~~ 177 (491)
T 3dax_A 173 RDLTR 177 (491)
T ss_dssp BCSTT
T ss_pred ccccc
Confidence 87654
No 32
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.74 E-value=3e-17 Score=133.14 Aligned_cols=157 Identities=10% Similarity=0.041 Sum_probs=117.8
Q ss_pred cCCCCccccchHHHHH--cccchHHHHHHHHHHcCC-ceEEeccccCcccE-------EEecChhHHHHhhhcCC----C
Q 036716 15 SFKRSSRTRMLSTLVL--NAHQLHEFATRVLQKSRG-TLEFKGPWFAKMDF-------IITSDPMNVHYISSKNF----S 80 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yG~-i~~~~~~~~~~~~~-------v~v~~p~~~~~i~~~~~----~ 80 (208)
||.++|++|++.++.. ...+++.++.++.++||+ ||++ ++++.++ +++++++..+.++..+. .
T Consensus 32 Gp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~---~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k~~ 108 (495)
T 3dsk_A 32 GNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRV---NMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKKD 108 (495)
T ss_dssp CCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEE---ECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEECSS
T ss_pred CCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEee---cCCCCCCccCCCCEEEEeCCcceeeecccccccccc
Confidence 7778999999998863 234688999999999999 9999 8888777 66777777766664421 1
Q ss_pred CCCCChhhhhhhhhcc----CcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHH
Q 036716 81 NYPKGPDLRMILEPFG----DGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQ 156 (208)
Q Consensus 81 ~~~~~~~~~~~~~~~g----~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~ 156 (208)
.+.. .+.... .++| .+++..+|+.|+++|+++++.|+... +.+ .+.+++. ++.+++.|.+....++++|+.
T Consensus 109 ~~~~-~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~-~~~i~~~-~~~ll~~~~~~~~~~~~vdl~ 183 (495)
T 3dsk_A 109 LLTG-TYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRI-FPEFQAT-YSELFDSLEKELSLKGKADFG 183 (495)
T ss_dssp CTTS-SSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTH-HHHHHHH-HHHHHHHHHHHHHHHSSEESH
T ss_pred cccc-cCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHH-HHHHHHH-HHHHHHHHHHHhccCCCccHH
Confidence 1111 110111 3444 34455689999999999999998754 665 5888888 599999887654445689999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCC
Q 036716 157 DVFQRFTFDNICMSVLGIDPNYL 179 (208)
Q Consensus 157 ~~~~~~~~~~i~~~~fg~~~~~~ 179 (208)
+.+..++++++++++||.+.+..
T Consensus 184 ~~~~~~~~~~i~~~~~G~~~~~~ 206 (495)
T 3dsk_A 184 GSSDGTAFNFLARAFYGTNPADT 206 (495)
T ss_dssp HHHHHHHHHHHHHHHHSCCGGGS
T ss_pred HHHHHHHHHHHHHHHcCCCcchh
Confidence 99999999999999999887654
No 33
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.73 E-value=3e-17 Score=130.44 Aligned_cols=148 Identities=10% Similarity=0.069 Sum_probs=111.3
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHc-CCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChh---hh
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKS-RGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPD---LR 89 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~y-G~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~---~~ 89 (208)
+|+++|.+..-+.+. .+++..+.++ ++| |+++++ ++ ++.++++++||+++++|+.++ .+.+++. +.
T Consensus 9 ~~~~~P~~~~~~~~~---~~p~~~~~~l-~~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~ 79 (412)
T 2zbx_A 9 QTTDAPAFPSNRSCP---YQLPDGYAQL-RDTPGPLHRV---TLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNFP 79 (412)
T ss_dssp CCCSSCBSSCCCSST---TSCCHHHHHH-HHSSSSEEEE---ECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTSC
T ss_pred CCCCCCCCCCCchhc---cChHHHHHHH-HhcCCCeEee---ccCCCCcEEEEecHHHHHHHHcCc--ccccCccccccc
Confidence 566677552222222 2467788888 788 999999 76 788999999999999999865 2444432 11
Q ss_pred hhh----hh--ccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHH-HH
Q 036716 90 MIL----EP--FGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQ-RF 162 (208)
Q Consensus 90 ~~~----~~--~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~-~~ 162 (208)
... .. .+.++++.+|+.|+++||+++++|+.+.++.+ .+.++++ ++.+++.|.+ .++++|+.+.+. .+
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~g~~~d~~~~~~~~~ 154 (412)
T 2zbx_A 80 ATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGM-RPEVEEV-VHGFLDEMLA---AGPTADLVSQFALPV 154 (412)
T ss_dssp CCSGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHH-HHHHHHH-HHHHHHHHHH---HCSCEEHHHHTTTHH
T ss_pred ccccccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCccHHHHHHHHH
Confidence 110 01 34678888999999999999999999999996 6899998 5999999873 356799998876 59
Q ss_pred HHHHHHHHhhcCCCC
Q 036716 163 TFDNICMSVLGIDPN 177 (208)
Q Consensus 163 ~~~~i~~~~fg~~~~ 177 (208)
++|+|+. +||.+.+
T Consensus 155 ~~~vi~~-~~G~~~~ 168 (412)
T 2zbx_A 155 PSMVICR-LLGVPYA 168 (412)
T ss_dssp HHHHHHH-HHTCCGG
T ss_pred HHHHHHH-HcCCCHH
Confidence 9999997 6998653
No 34
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.72 E-value=5.3e-17 Score=127.84 Aligned_cols=135 Identities=13% Similarity=0.033 Sum_probs=107.7
Q ss_pred cchHHHHHHHHHHcCCceEEeccccCc----ccEEEecChhHHHHhhhcCCCCCCCChhhhhhh--hhccCcccccCChh
Q 036716 33 HQLHEFATRVLQKSRGTLEFKGPWFAK----MDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL--EPFGDGVFAADGNL 106 (208)
Q Consensus 33 ~~~~~~~~~~~~~yG~i~~~~~~~~~~----~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~--~~~g~~i~~~~g~~ 106 (208)
.+++..+.++ ++||+++++ +.++ .++++++||+++++|+.+. +.|++++.+.... ...+.+++..+|+.
T Consensus 12 ~~p~~~~~~l-r~yGpv~~~---~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (384)
T 3oo3_A 12 LDPVPEFEEL-QKAGPLHEY---DTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRALLPGILQAYDPPD 86 (384)
T ss_dssp TEECHHHHHH-HHTCSEECC---CCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CCCTTCGGGCCTTH
T ss_pred cChhHHHHHH-HhcCCeeec---ccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCccccccccccccccccccCCChh
Confidence 3567788888 599999999 7766 8999999999999999554 6788876543222 23456777889999
Q ss_pred HHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhcCCCC
Q 036716 107 WKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 107 w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg~~~~ 177 (208)
|+++|++++++|+.+.++.+ .+.+++. ++.+++.|.+ .++++|+.+.+...+.+++...+||.+.+
T Consensus 87 ~~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~ 152 (384)
T 3oo3_A 87 HTRLRRTVAPAYSARRMERL-RPRIEEI-VEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRD 152 (384)
T ss_dssp HHHHHHHHGGGGCHHHHHHH-HHHHHHH-HHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99999999999999999996 6899888 5999998864 46689999999988877777778998653
No 35
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.71 E-value=9.6e-17 Score=127.31 Aligned_cols=145 Identities=10% Similarity=0.134 Sum_probs=111.3
Q ss_pred cCCCCccccchHHHHHcccchHHHHHHHHHHcCCceEEecccc-Cccc-EEEecChhHHHHhhhcCCCCCCCChhhhhh-
Q 036716 15 SFKRSSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF-AKMD-FIITSDPMNVHYISSKNFSNYPKGPDLRMI- 91 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~-~~~~-~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~- 91 (208)
+|+++|+.++. ..+++.++.++ ++||+++++ ++ ++.+ .++++||+++++|+.++ .|.+++.+...
T Consensus 12 ~~~~~p~~~~~------~~~p~~~~~~l-~~~Gpv~~~---~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~ 79 (406)
T 1s1f_A 12 PVRDWPAVDLP------GSDFDPVLTEL-MREGPVTRI---SLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQV 79 (406)
T ss_dssp CEEECCCCCCC------TTCCCHHHHHH-HHHCSEEEE---ECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTB
T ss_pred CCCCCCCCccc------ccCchHHHHHH-HhcCCeeee---ccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCc
Confidence 45556766662 23467777777 479999998 64 4555 99999999999999863 57776543211
Q ss_pred --h-h-h--ccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHH
Q 036716 92 --L-E-P--FGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTF 164 (208)
Q Consensus 92 --~-~-~--~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~ 164 (208)
. + . +++++++.+|+.|+++||+++++|+++.++.+ .+.++++ ++.+++.|.+ .++++|+.+.+ ..+++
T Consensus 80 ~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~ 154 (406)
T 1s1f_A 80 TRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERV-RERSRGM-LDELVDAMLR---AGPPADLTEAVLSPFPI 154 (406)
T ss_dssp CBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHH-HHHHHHH-HHHHHHHHHH---HCSSEEHHHHTTTHHHH
T ss_pred ccccccccccccccccCCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCccHHHHHhhHhHH
Confidence 1 2 2 36888899999999999999999999999996 6899988 5999999874 24579988665 57999
Q ss_pred HHHHHHhhcCCCC
Q 036716 165 DNICMSVLGIDPN 177 (208)
Q Consensus 165 ~~i~~~~fg~~~~ 177 (208)
|+|+. +||.+.+
T Consensus 155 ~vi~~-~~G~~~~ 166 (406)
T 1s1f_A 155 AVICE-LMGVPAT 166 (406)
T ss_dssp HHHHH-HHTCCGG
T ss_pred HHHHH-HhCCCHH
Confidence 99999 5998653
No 36
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.71 E-value=4.8e-17 Score=129.14 Aligned_cols=131 Identities=11% Similarity=0.086 Sum_probs=103.6
Q ss_pred chHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChh---hhh---hhh---hccCcccccC
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPD---LRM---ILE---PFGDGVFAAD 103 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~---~~~---~~~---~~g~~i~~~~ 103 (208)
+++..+.++ ++||+++++ ++ ++.++++++||+++++|+.++ .+.+++. +.. ... ..+.++++.+
T Consensus 25 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (408)
T 3abb_A 25 QPPKAYEER-RGESPLTQV---TLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIGVD 98 (408)
T ss_dssp SCCHHHHHH-CCSSSEEEE---ECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTTCC
T ss_pred CchHHHHHH-HhcCCeeee---ecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccccccccCC
Confidence 467788888 899999999 76 788999999999999999875 2444332 111 111 1345788889
Q ss_pred ChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHH-HHHHHHHHHHhhcCCC
Q 036716 104 GNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQ-RFTFDNICMSVLGIDP 176 (208)
Q Consensus 104 g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~-~~~~~~i~~~~fg~~~ 176 (208)
|+.|+++||+++++|+.+.++.+ .+.++++ ++.+++.|.+ .++++|+.+.+. .+++|+|+. +||.+.
T Consensus 99 g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~ 166 (408)
T 3abb_A 99 DPVHARQRRMLIPSFGVKRMNAI-RPRLQSL-VDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPY 166 (408)
T ss_dssp TTHHHHHHHHHGGGGCHHHHHHH-HHHHHHH-HHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred chHHHHHHHHhhhhcCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCH
Confidence 99999999999999999999996 6899998 5999999873 356799998776 599999997 699865
No 37
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.71 E-value=2.2e-16 Score=127.31 Aligned_cols=156 Identities=9% Similarity=0.016 Sum_probs=113.8
Q ss_pred cCCCCccccchHHHHHc--cc-chHHHHHHHHHHcCC-ceEEeccccCcc-------cEEEecChhHHHHhhhc----CC
Q 036716 15 SFKRSSRTRMLSTLVLN--AH-QLHEFATRVLQKSRG-TLEFKGPWFAKM-------DFIITSDPMNVHYISSK----NF 79 (208)
Q Consensus 15 ~p~~~p~~G~~~~~~~~--~~-~~~~~~~~~~~~yG~-i~~~~~~~~~~~-------~~v~v~~p~~~~~i~~~----~~ 79 (208)
||.++|++|++.++... .. +++.++.++.++||+ ||++ ++++. ..|++++++..+.++.. +.
T Consensus 13 Gp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~---~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~~~~~ 89 (473)
T 3dan_A 13 GSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRA---NMPPGPFVSSNPKVIVLLDAKSFPILFDVSKVEKK 89 (473)
T ss_dssp CCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEE---ECTTCTTTCSCCEEEEECSTTTGGGGGCTTTEECS
T ss_pred CCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEe---cCCCCCccccCCceEEeecccccceecCCcceecc
Confidence 78889999999987532 34 678899999999999 9999 66533 44455666655555531 10
Q ss_pred CCCCCChhhhhhhhhcc----CcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccH
Q 036716 80 SNYPKGPDLRMILEPFG----DGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDL 155 (208)
Q Consensus 80 ~~~~~~~~~~~~~~~~g----~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~ 155 (208)
..+... +......+| .+++..+|+.|+++|++++++|+++ ++.+ .+.+++. ++.+++.|.+..++++++|+
T Consensus 90 ~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~~-~~~~-~~~i~~~-~~~ll~~~~~~~~~~~~vdl 164 (473)
T 3dan_A 90 DLFTGT--YMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNS-SNRV-IPQFETT-YTELFEGLEAELAKNGKAAF 164 (473)
T ss_dssp SCTTSS--SCCCGGGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHHH-HHHH-HHHHHHH-HHHHHHHHHHHHHHHSCEEC
T ss_pred cccccc--ccCCccccCCCcceeeeCCCcHHHHHHHHHHHHHHHHH-HHHH-HHHHHHH-HHHHHHHHHHHhccCCcccH
Confidence 111111 111112233 4556678999999999999999994 8886 6889888 59999998765444568999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC
Q 036716 156 QDVFQRFTFDNICMSVLGIDPNY 178 (208)
Q Consensus 156 ~~~~~~~~~~~i~~~~fg~~~~~ 178 (208)
.+.+..++++++++++||.+.+.
T Consensus 165 ~~~~~~~~~~~i~~~~~G~~~~~ 187 (473)
T 3dan_A 165 NDVGEQAAFRFLGRAYFNSNPEE 187 (473)
T ss_dssp HHHHHHHHHHHHHHHHHSCCGGG
T ss_pred HHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999998876
No 38
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.70 E-value=1.6e-16 Score=126.21 Aligned_cols=131 Identities=14% Similarity=0.090 Sum_probs=107.0
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhh-h------hhhhccCcccccCChh
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLR-M------ILEPFGDGVFAADGNL 106 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~-~------~~~~~g~~i~~~~g~~ 106 (208)
+++..+.++ ++||+++++ ++++.+++++++|+++++++.++ + |++++... . ..+..++++++.+|+.
T Consensus 21 ~p~~~~~~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 94 (411)
T 3a4g_A 21 NPHPAYAAL-RAEDPVRKL---ALPDGPVWLLTRYADVREAFVDP-R-LSKDWRHTLPEDQRADMPATPTPMMILMDPPD 94 (411)
T ss_dssp CCHHHHHHH-HHHCSEEEE---EETTEEEEEECSHHHHHHHHTCT-T-EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTH
T ss_pred CchHHHHHH-HhcCCeeec---cCCCCCEEEEecHHHHHHHHhCC-C-cccccccccccccccccCcccccccccCCchH
Confidence 467788888 899999999 77888999999999999999876 3 77776432 1 1132467888899999
Q ss_pred HHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHH-HHHHHHHHHHHHHhhcCCCC
Q 036716 107 WKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQD-VFQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 107 w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~i~~~~fg~~~~ 177 (208)
|+++||+++++|+++.++.+ .+.++++ ++.+++.|.+ ++++|+.+ .+..+++|+|+.+ ||.+.+
T Consensus 95 h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~ 159 (411)
T 3a4g_A 95 HTRLRKLVGRSFTVRRMNEL-EPRITEI-ADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAE 159 (411)
T ss_dssp HHHHHHHHHTTCCHHHHHHH-HHHHHHH-HHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHhhhhhCHHHHHHH-HHHHHHH-HHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHH
Confidence 99999999999999999996 6899888 5999888863 35799975 4578999999975 998654
No 39
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.69 E-value=1.4e-16 Score=126.20 Aligned_cols=131 Identities=15% Similarity=0.173 Sum_probs=107.3
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhh--h----------hh-hh---hccC
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDL--R----------MI-LE---PFGD 97 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~--~----------~~-~~---~~g~ 97 (208)
+++..+.++ ++||+++++ ++++.+++++++|+.+++++.++ .|++++.+ . .+ .+ ..++
T Consensus 15 ~p~~~~~~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 15 DWYRTYAEL-RETAPVTPV---RFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp SHHHHHHHH-HHHCSEEEE---EETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred CcHHHHHHH-HhcCCeeee---cCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 578888888 999999999 88888999999999999999876 56766532 2 11 12 1478
Q ss_pred cccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCC
Q 036716 98 GVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDP 176 (208)
Q Consensus 98 ~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~ 176 (208)
++++.+|+.|+++||+++++|+.+.++.+ .+.+++. ++.+++.+.+ ++++|+.+.+ ..+++|+|+.+ ||.+.
T Consensus 89 ~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~ 161 (404)
T 1z8o_A 89 NMGTSDPPTHTRLRKLVSQEFTVRRVEAM-RPRVEQI-TAELLDEVGD----SGVVDIVDRFAHPLPIKVICEL-LGVDE 161 (404)
T ss_dssp SGGGCCTTHHHHHHHHHHTTSCHHHHHHT-HHHHHHH-HHHHHHTSCS----SSEEEHHHHTTTHHHHHHHHHH-TTCCG
T ss_pred ccccCCCcHHHHHHHHHHHhhCHHHHHHH-HHHHHHH-HHHHHHhhhh----cCCcchHHHHhHHHHHHHHHHH-hCCCH
Confidence 88889999999999999999999999996 6899888 5999888752 5579998655 68999999985 99866
Q ss_pred C
Q 036716 177 N 177 (208)
Q Consensus 177 ~ 177 (208)
+
T Consensus 162 ~ 162 (404)
T 1z8o_A 162 K 162 (404)
T ss_dssp G
T ss_pred H
Confidence 4
No 40
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.69 E-value=2.3e-16 Score=126.25 Aligned_cols=135 Identities=11% Similarity=0.112 Sum_probs=108.1
Q ss_pred chHHHHHHHHHHcCCceEEeccccC-------cccEEEecChhHHHHhhhcCCCCCCCChh--hhhh-hh--hccCcccc
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFA-------KMDFIITSDPMNVHYISSKNFSNYPKGPD--LRMI-LE--PFGDGVFA 101 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~-------~~~~v~v~~p~~~~~i~~~~~~~~~~~~~--~~~~-~~--~~g~~i~~ 101 (208)
+++..+.++. +||+|+++ +++ +.++++++||+.+++|+.++ +.|++++. +... .. ..++++++
T Consensus 45 ~p~~~~~~l~-~~Gpv~~~---~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~ 119 (435)
T 2wm5_A 45 VRDGAFATLR-REAPISFW---PTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIV 119 (435)
T ss_dssp HHHHHHHHHH-HHCSEEEE---CCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGG
T ss_pred ChhHHHHHHH-hcCCeEec---ccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhcccccc
Confidence 4677788884 79999999 765 56899999999999999876 56777652 1111 11 23678888
Q ss_pred cCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 102 ADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 102 ~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
.+|+.|+++|++++++|+++.++.+ .+.++++ ++.+++.+.+.. +++++|+.+.+ ..+++|+|+++ ||.+.+
T Consensus 120 ~dg~~h~~~R~~l~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~~~-~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~ 192 (435)
T 2wm5_A 120 LDDPRHQRLRSIVSRAFTPKVVARI-EAAVRDR-AHRLVSSMIANN-PDRQADLVSELAGPLPLQIICDM-MGIPKA 192 (435)
T ss_dssp CCTTHHHHHHHHHHHTCCHHHHHHH-HHHHHHH-HHHHHHHHHHHC-TTSEEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred CCcHHHHHHHHHhHHhhCHHHHHHH-HHHHHHH-HHHHHHHHHhcC-CCCcEehHHHHHHHHHHHHHHHH-cCCCHH
Confidence 9999999999999999999999996 6899988 599999987532 23479998765 79999999999 998764
No 41
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.69 E-value=2.6e-16 Score=124.70 Aligned_cols=132 Identities=10% Similarity=-0.002 Sum_probs=106.5
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhh------hhhhhhccCcccccCChhH
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDL------RMILEPFGDGVFAADGNLW 107 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~------~~~~~~~g~~i~~~~g~~w 107 (208)
+++..+.++ ++||+++++ +.++.+++++++|+.+++++.++ +.|.+++.. .......++++++.+|+.|
T Consensus 14 ~p~~~~~~~-r~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h 88 (404)
T 3ejb_B 14 NPYSFYDTL-RAVHPIYKG---SFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDH 88 (404)
T ss_dssp CHHHHHHHH-HHHCSEEEE---EETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHH
T ss_pred CchHHHHHH-HhhCCEeec---cCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcCCchH
Confidence 467777777 689999999 88899999999999999999877 667665521 1122456789999999999
Q ss_pred HHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHH-HHHHHHHHHHHHHhhcCCCC
Q 036716 108 KMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQD-VFQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 108 ~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~i~~~~fg~~~~ 177 (208)
+++||+++++|++++++.+ .+.++++ ++.+++.+.+ ++++|+.. ....+++++++.+ ||.+.+
T Consensus 89 ~~~Rr~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~ 152 (404)
T 3ejb_B 89 RRLRTLASGAFTPRTTESY-QPYIIET-VHHLLDQVQG----KKKMEVISDFAFPLASFVIANI-IGVPEE 152 (404)
T ss_dssp HHHHHHHHGGGSHHHHHTT-HHHHHHH-HHHHHHTTTT----TSEEEHHHHTHHHHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHHhhcCHHHHHHH-HHHHHHH-HHHHHHHhhh----cCCcchHHHHHHHHHHHHHHHH-cCCCHH
Confidence 9999999999999999996 6899888 5899888762 45789755 4556999999995 897653
No 42
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.69 E-value=2.2e-16 Score=125.31 Aligned_cols=133 Identities=14% Similarity=0.187 Sum_probs=106.6
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh--hh---hhh------h-hccCcccc
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD--LR---MIL------E-PFGDGVFA 101 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~--~~---~~~------~-~~g~~i~~ 101 (208)
+++..+.++ ++||+++++ ++++.++++++||+++++|+.++ + +++++. +. ... . ..++++++
T Consensus 16 ~p~~~~~~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (408)
T 1odo_A 16 DHHTEHRTL-REGGPATWV---DVLGVQAWSVSDPVLLKQLLTSS-D-VSKDARAHWPAFGEVVGTWPLALWVAVENMFT 89 (408)
T ss_dssp THHHHHHHH-HTTCSEEEE---EETTEEEEEECCHHHHHHHTTCT-T-EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGG
T ss_pred ChHHHHHHH-HHhCCeEEe---ccCCCCEEEECCHHHHHHHHcCC-C-cccccccccccccccccccccccccccccccc
Confidence 578888888 999999999 77788999999999999999875 2 455442 11 111 1 13578888
Q ss_pred cCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHH-HHHHHHHHHHhhcCCC
Q 036716 102 ADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQ-RFTFDNICMSVLGIDP 176 (208)
Q Consensus 102 ~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~-~~~~~~i~~~~fg~~~ 176 (208)
.+|+.|+++||+++++|++..++.+ .+.++++ ++.+++.|.+. ..++++|+.+.+. .+++|+|+. +||.+.
T Consensus 90 ~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~ 161 (408)
T 1odo_A 90 AYGPNHRKLRRLVAPAFSARRVDAM-RPAVEAM-VTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQ 161 (408)
T ss_dssp CCHHHHHHHHHTTGGGGSHHHHHHH-HHHHHHH-HHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCH
T ss_pred cCChHHHHHHHHhhhhcCHHHHHHH-HHHHHHH-HHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCH
Confidence 9999999999999999999999996 6899998 59999999753 2256799998886 599999996 799764
No 43
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.68 E-value=3e-16 Score=126.54 Aligned_cols=149 Identities=11% Similarity=0.024 Sum_probs=109.6
Q ss_pred cCCC-CccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhh-h
Q 036716 15 SFKR-SSRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMI-L 92 (208)
Q Consensus 15 ~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~-~ 92 (208)
||++ +|++||++.+..+ ++..+.+++++||+++++ ++|+.++++++||+++++++.++ +.+..++..... .
T Consensus 22 gp~~~~P~iG~~~~~~~~---~~~~~~~l~~~yG~v~~~---~~g~~~~vvv~~~~~~~~il~~~-~~~~~~~~~~~~~~ 94 (475)
T 3b98_A 22 LDKGMIPWLGHALEFGKD---AAKFLTRMKEKHGDIFTV---RAAGLYITVLLDSNCYDAVLSDV-ASLDQTSYAQVLMK 94 (475)
T ss_dssp EECCSSTTTBTHHHHHHC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECCTTTHHHHHTCT-TTEESHHHHHHHHH
T ss_pred CCCCCcchHHhHHHHhhC---HHHHHHHHHHHhCCeEEE---EECCceEEEEeCHHHHHHHHcCc-ccCCchHHHHHHHH
Confidence 5666 8999999998643 788999999999999999 88899999999999999999876 324444332222 2
Q ss_pred hhccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhh--ccCCcccHHHHHHHHHHHHHHHH
Q 036716 93 EPFGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHAS--EVGIKVDLQDVFQRFTFDNICMS 170 (208)
Q Consensus 93 ~~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~--~~~~~vd~~~~~~~~~~~~i~~~ 170 (208)
..+|.+++..+|+.| |+++.++|+.+.++.+. +.+.++ .+.+++.+.... .....+++...+..+++++++..
T Consensus 95 ~~~g~~~~~~~~~~~---R~~~~~~f~~~~l~~~~-~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (475)
T 3b98_A 95 RIFNMILPSHNPESE---KKRAEMHFQGASLTQLS-NSMQNN-LRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLT 169 (475)
T ss_dssp HTTCCCCTTCCHHHH---HHHHHHHTSHHHHHHHH-HHHHHH-HHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCChHHH---HHHHHHHcChhhHHHHH-HHHHHH-HHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhhh
Confidence 556777777778766 56777899999999874 666666 366655543221 11124678888888888888888
Q ss_pred hhcCC
Q 036716 171 VLGID 175 (208)
Q Consensus 171 ~fg~~ 175 (208)
.||.+
T Consensus 170 ~~g~~ 174 (475)
T 3b98_A 170 VFGAE 174 (475)
T ss_dssp HHCCT
T ss_pred eeCCc
Confidence 88843
No 44
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.68 E-value=1.7e-16 Score=126.18 Aligned_cols=130 Identities=12% Similarity=0.037 Sum_probs=105.3
Q ss_pred chHHHHHHHHHHcC--CceEEeccc-cCcccEEEecChhHHHHhhhcCCCCCCCCh-hhhhhhhhccCc-ccccCChhHH
Q 036716 34 QLHEFATRVLQKSR--GTLEFKGPW-FAKMDFIITSDPMNVHYISSKNFSNYPKGP-DLRMILEPFGDG-VFAADGNLWK 108 (208)
Q Consensus 34 ~~~~~~~~~~~~yG--~i~~~~~~~-~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~-~~~~~~~~~g~~-i~~~~g~~w~ 108 (208)
+++..+.++ ++|| +++++ + +| +.++++||+++++|+.+. +.|++++ .+......++++ +++.+|+.|+
T Consensus 38 ~p~~~~~~l-~~~G~~pv~~~---~~~g--~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 110 (415)
T 2zwu_A 38 GVQEAWAVL-QESNVPDLVWT---RCNG--GHWIATRGQLIREAYEDY-RHFSSECPFIPREAGEAYDFIPTSMDPPEQR 110 (415)
T ss_dssp CHHHHHHGG-GSTTSCSEEEE---CGGG--CEEEECSHHHHHHHHHCT-TTEETTSCSSSHHHHHHCCCTTTTCCTTTTH
T ss_pred ChHHHHHHH-HhcCCCCeEEe---cCCC--CeEEEcCHHHHHHHHcCc-cccCCCcccCCCCccccccccCccCCCcHHH
Confidence 577888888 4899 99998 6 44 699999999999999754 5677775 232222334777 8889999999
Q ss_pred HHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 109 MQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 109 ~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
++|++++++|+...++.+ .+.++++ ++.+++.|.+ . +++|+.+.+ ..+++|+|+.+ ||.+.+
T Consensus 111 ~~R~~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~l~~---~-~~~d~~~~~~~~~~~~vi~~~-~G~~~~ 173 (415)
T 2zwu_A 111 QFRALANQVVGMPVVDKL-ENRIQEL-ACSLIESLRP---Q-GQCNFTEDYAEPFPIRIFMLL-AGLPEE 173 (415)
T ss_dssp HHHHHHHHHHSHHHHHHH-HHHHHHH-HHHHHHHHGG---G-TEEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHhhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-cCCCHH
Confidence 999999999999999996 6899888 5999998864 2 379999764 88999999999 998764
No 45
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.68 E-value=1.6e-16 Score=125.98 Aligned_cols=132 Identities=11% Similarity=0.111 Sum_probs=105.8
Q ss_pred chHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChh--h-hh---hhhh-ccCcccccCCh
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPD--L-RM---ILEP-FGDGVFAADGN 105 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~--~-~~---~~~~-~g~~i~~~~g~ 105 (208)
+++..+.++ ++||+++++ ++ ++.++++++||+++++|+.++ .|.+++. + .. .... .++++++.+|+
T Consensus 20 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 93 (403)
T 3aba_A 20 LPPDGIADI-RAAAPVTRA---TFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDEP 93 (403)
T ss_dssp SCCTTHHHH-HHHCSEEEE---ECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCTT
T ss_pred ChhHHHHHH-HhcCCeeee---ccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCch
Confidence 356677788 899999999 86 789999999999999999875 4666531 1 11 1122 46788889999
Q ss_pred hHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 106 LWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 106 ~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
.|+++||+++++|+++.++.+ .+.++++ ++.+++.|.+ .++++|+.+.+ ..+++|+|+. +||.+.+
T Consensus 94 ~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 160 (403)
T 3aba_A 94 EHTSDRKLLAKEFTVRRMQAL-RPNIQRI-VDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVE 160 (403)
T ss_dssp HHHHHHHHHHHHSCHHHHHTT-HHHHHHH-HHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred hHHHHHHHHHhhcCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 999999999999999999996 6899988 5999999874 25679998665 5799999998 6998653
No 46
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.67 E-value=3.9e-16 Score=123.45 Aligned_cols=129 Identities=13% Similarity=0.125 Sum_probs=104.2
Q ss_pred cchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhhhccCcccccCChhHHHHHH
Q 036716 33 HQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFGDGVFAADGNLWKMQRK 112 (208)
Q Consensus 33 ~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~i~~~~g~~w~~~Rk 112 (208)
.+++..+.++++ ||+++++ . .+++++++|+++++|+.++ +.|++++... .....++++++.+|+.|+++||
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~---~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~~~l~~~~g~~h~~~R~ 88 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRD---R---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQPALPMMIDMDDPAHLLRRK 88 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEEC---T---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSCCCSSGGGCCTTHHHHHHH
T ss_pred cChhHHHHHHHh-cCCeeec---C---CCeEEEecHHHHHHHHhCc-ccccCccccC-CcccccccccccCchHHHHHHH
Confidence 357788888876 9999877 3 3799999999999999876 4677765432 2233567888899999999999
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHH-HHHHHHHHHHHHHHhhcCCCC
Q 036716 113 MIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQ-DVFQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 113 ~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~-~~~~~~~~~~i~~~~fg~~~~ 177 (208)
+++++|++..++.+ .+.++++ ++.+++.|.+ ++++|+. +.+..+++|+|+.+ ||.+.+
T Consensus 89 ~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~ 147 (398)
T 2xkr_A 89 LVNAGFTRKRVKDK-EASIAAL-CDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPE 147 (398)
T ss_dssp HHGGGSCHHHHHTT-HHHHHHH-HHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred HhhhhhCHHHHHHH-HHHHHHH-HHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 99999999999996 6889888 5999888863 3479998 55678999999999 998753
No 47
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.67 E-value=8.3e-16 Score=121.88 Aligned_cols=132 Identities=11% Similarity=0.156 Sum_probs=106.2
Q ss_pred chHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChhhhh-hhh-hccCc--ccccCC----
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPDLRM-ILE-PFGDG--VFAADG---- 104 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~-~~~-~~g~~--i~~~~g---- 104 (208)
+++..+.++ ++||+++++ ++ ++.+.++++||+++++|+.++ .|.+++.+.. ..+ ..+.+ +++.+|
T Consensus 27 ~p~~~~~~l-~~yGpv~~~---~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 100 (404)
T 2xbk_A 27 KLSPLLRAL-QDRGPIHRV---RTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAES 100 (404)
T ss_dssp BCCHHHHHH-HHHCSEEEE---ECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHHH
T ss_pred CccHHHHHH-HhhCCEeee---ccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCCC
Confidence 467788888 899999999 75 789999999999999999875 3666654322 122 23556 888899
Q ss_pred --hhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 105 --NLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 105 --~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
+.|+++||+++++|+++.++.+ .+.++++ ++.+++.|.+ .++++|+.+.+ ..+++++|+. +||.+.+
T Consensus 101 ~~~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 170 (404)
T 2xbk_A 101 GRRQHAETRRLLTPLFSARRVLEM-QPKVEEA-ADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQ 170 (404)
T ss_dssp HHHHHHHHHHHHGGGGCHHHHHHH-HHHHHHH-HHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGG
T ss_pred CCchHHHHHHHhhhhcCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHH
Confidence 9999999999999999999996 6899988 5999998873 35579998665 5799999997 7998653
No 48
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.66 E-value=9.1e-16 Score=122.10 Aligned_cols=133 Identities=11% Similarity=0.097 Sum_probs=107.6
Q ss_pred chHHHHHHHHHHcCCceEEeccccC-cccEEEecChhHHHHhhhcCCCCCCCCh---hhhhhhh------hccCcccccC
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFA-KMDFIITSDPMNVHYISSKNFSNYPKGP---DLRMILE------PFGDGVFAAD 103 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~-~~~~v~v~~p~~~~~i~~~~~~~~~~~~---~~~~~~~------~~g~~i~~~~ 103 (208)
+++..+.++.++ |+++++ +++ +.+++++++|+++++|+.++ .|.+++ .+..... ..++++++.+
T Consensus 30 dp~~~~~~l~~~-Gpv~~~---~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 103 (417)
T 3tyw_A 30 AAPAEYAALRTD-DPVARV---TLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTD 103 (417)
T ss_dssp SCCTHHHHHHHT-CTEEEE---ECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCC
T ss_pred CchHHHHHHHhh-CCeeee---ecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcC
Confidence 567788888887 999999 765 58999999999999999876 465532 1222222 2467889999
Q ss_pred ChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCCC
Q 036716 104 GNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPNY 178 (208)
Q Consensus 104 g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~~ 178 (208)
|+.|+++||+++++|+.++++.+ .+.+++. ++.+++.+.+ .++++|+.+.+ ..+++++|+.+ ||.+.+.
T Consensus 104 g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~ 173 (417)
T 3tyw_A 104 APEHTRYRRMLLPAFTVRRVRAM-RPAVQAR-VDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHD 173 (417)
T ss_dssp HHHHHHHHHHHGGGGCHHHHHHT-HHHHHHH-HHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTT
T ss_pred CcHHHHHHHHHHhhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHH
Confidence 99999999999999999999996 6899888 5999998875 45679999887 68999999997 9987753
No 49
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.66 E-value=1.4e-15 Score=121.40 Aligned_cols=131 Identities=12% Similarity=0.024 Sum_probs=104.5
Q ss_pred chHHHHHHHHHHcCCceEEeccccC--cccEEEecChhHHHHhhhcCCCCCCCChh--------hhh--------hhhhc
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFA--KMDFIITSDPMNVHYISSKNFSNYPKGPD--------LRM--------ILEPF 95 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~--~~~~v~v~~p~~~~~i~~~~~~~~~~~~~--------~~~--------~~~~~ 95 (208)
+++..+.++. +||+++++ ++| +.++++++||+.+++|+.++ .|++++. +.. .....
T Consensus 21 ~p~~~~~~l~-~~Gpv~~~---~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (425)
T 2z3t_A 21 DPYPVYRRYR-EAAPVHRT---ASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVV 94 (425)
T ss_dssp CCHHHHHHHH-HHCSEEEE---CCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHH
T ss_pred ChHHHHHHHH-hcCCeEec---cccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccc
Confidence 3677777775 59999999 877 67899999999999999865 5776642 111 11233
Q ss_pred cCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHH-HHHHHHHHHHHHhhcC
Q 036716 96 GDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDV-FQRFTFDNICMSVLGI 174 (208)
Q Consensus 96 g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~i~~~~fg~ 174 (208)
++++++++|+.|+++||+++++|+++.++.+ .+.++++ ++.+++.+.+ .| ++|+.+. +..+++|+|+.+ ||.
T Consensus 95 ~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~---~g-~~dl~~~~~~~~~~~vi~~~-~G~ 167 (425)
T 2z3t_A 95 ENWLVFLDPPHHTELRSLLTTEFSPSIVTGL-RPRIAEL-ASALLDRLRA---QR-RPDLVEGFAAPLPILVISAL-LGI 167 (425)
T ss_dssp TTCGGGCCHHHHHHHHHHHHGGGSHHHHHHH-HHHHHHH-HHHHHHHHTT---SS-SCBHHHHTTTHHHHHHHHHH-HTC
T ss_pred ccccccCCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---cC-CccHHHHHHHHHHHHHHHHH-hCC
Confidence 4889999999999999999999999999996 6899888 5999998863 23 7999874 578999999998 998
Q ss_pred CCC
Q 036716 175 DPN 177 (208)
Q Consensus 175 ~~~ 177 (208)
+.+
T Consensus 168 ~~~ 170 (425)
T 2z3t_A 168 PEE 170 (425)
T ss_dssp CGG
T ss_pred CHH
Confidence 654
No 50
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.65 E-value=9.3e-16 Score=121.85 Aligned_cols=132 Identities=14% Similarity=0.166 Sum_probs=104.9
Q ss_pred chHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCCh-hhhhh-----h------h-hc-cCc
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGP-DLRMI-----L------E-PF-GDG 98 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~-~~~~~-----~------~-~~-g~~ 98 (208)
+++..+.++ ++||+++++ ++ ++.++++++||+++++|+.++ + +.+++ .+... . . .. +++
T Consensus 18 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (411)
T 1gwi_A 18 DLDGESARL-RAAGPLAAV---ELPGGVPVWAVTHHAEAKALLTDP-R-LVKDINVWGAWRRGEIPADWPLIGLANPGRS 91 (411)
T ss_dssp CHHHHHHHH-HHTCSEEEE---EETTTEEEEEECSHHHHHHHHTCT-T-EECCGGGCHHHHTTCSCTTCTTHHHHSCCSS
T ss_pred ChHHHHHHH-HHhCCeeee---ecCCCccEEEEeCHHHHHHHHcCC-c-cccCcccccccccccCCcccchhhhhccccc
Confidence 577788888 999999999 76 788999999999999999875 2 44443 11111 0 0 13 567
Q ss_pred ccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHH-HHHHHHHHHHhhcCCCC
Q 036716 99 VFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQ-RFTFDNICMSVLGIDPN 177 (208)
Q Consensus 99 i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~-~~~~~~i~~~~fg~~~~ 177 (208)
+++.+|+.|+++||+++++|+++.++.+ .+.++++ ++.+++.|.+ .++++|+.+.+. .+++|+|+. +||.+.+
T Consensus 92 l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 165 (411)
T 1gwi_A 92 MLTVDGAEHRRLRTLVAQALTVRRVEHM-RGRITEL-TDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEEA 165 (411)
T ss_dssp GGGCCHHHHHHHHHHHTTTSCHHHHHTT-HHHHHHH-HHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred cccCCcHHHHHHHHHHHHhcCHHHHHHH-HHHHHHH-HHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCHH
Confidence 8889999999999999999999999996 6899888 5999888863 356799998776 599999996 6998653
No 51
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.65 E-value=1.1e-15 Score=121.36 Aligned_cols=132 Identities=10% Similarity=0.091 Sum_probs=105.6
Q ss_pred chHHHHHHHHHHcCCceEEeccccCc--ccEEEecChhHHHHhhhcCCCCCCCChhhhh----hhhh--c-cCcccccCC
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAK--MDFIITSDPMNVHYISSKNFSNYPKGPDLRM----ILEP--F-GDGVFAADG 104 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~--~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~----~~~~--~-g~~i~~~~g 104 (208)
+++..+.++. +||+++++ ++++ .+.+++++|+.+++|+.++ .|.+++.+.. ..+. + ++++++.+|
T Consensus 28 ~p~~~~~~l~-~~Gpv~~~---~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 101 (411)
T 2dkk_A 28 EFDPVLAELM-REGPLTRV---RLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQ 101 (411)
T ss_dssp CCCHHHHHHH-TTCSEEEE---ECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCT
T ss_pred cccHHHHHHH-hcCCeEee---ecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCc
Confidence 3457777776 89999999 6544 7899999999999999763 5777654421 1122 2 678888999
Q ss_pred hhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHH-HHHHHHHHHHhhcCCCC
Q 036716 105 NLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQ-RFTFDNICMSVLGIDPN 177 (208)
Q Consensus 105 ~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~-~~~~~~i~~~~fg~~~~ 177 (208)
+.|+++|++++++|+++.++.+ .+.+++. ++.+++.|.+ .++++|+.+.+. .+++|+|+. +||.+.+
T Consensus 102 ~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~ 169 (411)
T 2dkk_A 102 PDHNRLRRAVAGAFTVGATKRL-RPRAQEI-LDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAA 169 (411)
T ss_dssp THHHHHHHHHGGGSSHHHHHHH-HHHHHHH-HHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSS
T ss_pred hHHHHHHHHhhHhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHH
Confidence 9999999999999999999996 6899988 5999999874 345799987775 799999998 5998764
No 52
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.65 E-value=1.4e-15 Score=120.94 Aligned_cols=130 Identities=12% Similarity=0.093 Sum_probs=104.2
Q ss_pred chHHHHHHHHHHcCCce-----EEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhh-hh----h-h-hccCcccc
Q 036716 34 QLHEFATRVLQKSRGTL-----EFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLR-MI----L-E-PFGDGVFA 101 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~-----~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~-~~----~-~-~~g~~i~~ 101 (208)
+++..+.++ ++||+++ ++ ++ .+.++++||+++++|+.++ +.|++++... .. . . ..++++++
T Consensus 26 ~p~~~~~~l-~~~Gpv~~~~~~~~---~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (414)
T 2uuq_A 26 NPWPMYRAL-RDHDPVHHVVPPQR---PE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVM 98 (414)
T ss_dssp CCHHHHHHH-HHHCSEEEECCTTC---GG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGG
T ss_pred CchHHHHHH-HhcCCEEccccccc---CC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccccccccccccccc
Confidence 467777777 5789998 77 54 6899999999999999886 6687765331 11 1 1 33678888
Q ss_pred cCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHH-HHHHHHHHHHHHHHhhcCCCC
Q 036716 102 ADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQ-DVFQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 102 ~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~-~~~~~~~~~~i~~~~fg~~~~ 177 (208)
.+|+.|+++||+++++|+++.++.+ .+.++++ ++.+++.|.+ . +++|+. +.+..+++|+|+. +||.+.+
T Consensus 99 ~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~---~-~~vdl~~~~~~~~~~~vi~~-~~G~~~~ 168 (414)
T 2uuq_A 99 QDPPVHTEFRKLVSRGFTPRQVETV-EPTVRKF-VVERLEKLRA---N-GGGDIVTELFKPLPSMVVAH-YLGVPEE 168 (414)
T ss_dssp CCTTHHHHHHHHHHTTSSHHHHHHH-HHHHHHH-HHHHHHHHHH---T-TEEEHHHHTTTHHHHHHHHH-HTTCCGG
T ss_pred CCchhHHHHHHHhhhhcCHHHHHHH-HHHHHHH-HHHHHHHHHh---c-CCccHHHHHHHHhHHHHHHH-HhCCCHH
Confidence 9999999999999999999999996 6899988 5999998864 2 369997 5678999999999 6898764
No 53
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.65 E-value=5.4e-16 Score=123.42 Aligned_cols=132 Identities=15% Similarity=0.236 Sum_probs=106.4
Q ss_pred chHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChhh-hh---hhhh-ccCcccccCChhH
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPDL-RM---ILEP-FGDGVFAADGNLW 107 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~-~~---~~~~-~g~~i~~~~g~~w 107 (208)
+++..+.++ ++||+++++ ++ ++.+.++++||+++++|+.++ .|.+++.+ .. +.+. .++++++.+|+.|
T Consensus 38 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 111 (417)
T 2y5n_A 38 TLAGRYGEL-QETEPVSRV---RPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEH 111 (417)
T ss_dssp CCCHHHHHH-HHHCSEEEE---ECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTHH
T ss_pred CchHHHHHH-HhcCCeEee---ccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchHH
Confidence 467788888 899999999 76 789999999999999999875 46776543 21 1121 3678888999999
Q ss_pred HHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 108 KMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 108 ~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
+++||+++++|+++.++.+ .+.++++ ++.+++.+.+ .+.++|+.+.+ ..+++|+|+. +||.+.+
T Consensus 112 ~~~R~~l~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~ 176 (417)
T 2y5n_A 112 SRLRRLVVKAFTARRAESL-RPRAREI-AHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSA 176 (417)
T ss_dssp HHHHHHHHHHSCHHHHHHT-HHHHHHH-HHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG
T ss_pred HHHHHHHhhhcCHHHHHHH-HHHHHHH-HHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHH
Confidence 9999999999999999996 6899888 5999998863 22279998766 5699999998 6998654
No 54
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.64 E-value=1.9e-15 Score=120.17 Aligned_cols=133 Identities=11% Similarity=0.044 Sum_probs=105.3
Q ss_pred chHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChhhhh------hhhhc-----cCc-cc
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPDLRM------ILEPF-----GDG-VF 100 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~------~~~~~-----g~~-i~ 100 (208)
+++..+.++. +||+++++ ++ |+.++++++||+++++++.++ .|.+++.... ....+ +.+ ++
T Consensus 23 ~p~~~~~~l~-~~Gpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 96 (413)
T 2z36_A 23 APPAAYERLR-ERAPINKV---RLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLML 96 (413)
T ss_dssp BCCHHHHHHH-HHCSEEEE---EETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGG
T ss_pred CchHHHHHHH-HcCCeeEe---ecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccccccccccccccccccc
Confidence 4677778876 78999999 76 788999999999999999874 4666542211 11332 677 88
Q ss_pred ccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 101 AADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 101 ~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
+.+|+.|+++||+++++|+++.++.+ .+.++++ ++.+++.+.+. .++++|+.+.+ ..+++++|+.+ ||.+.+
T Consensus 97 ~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~~--~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~ 169 (413)
T 2z36_A 97 GMDGAEHSAARRPVIGEFTVKRLAAL-RPRIQDI-VDHFIDDMLAT--DQRPVDLVQALSLPVPSLVICEL-LGVPYT 169 (413)
T ss_dssp GCCHHHHHHHHHHHHGGGSHHHHHHH-HHHHHHH-HHHHHHHHTTC--SCSSEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred ccCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHH-HHHHHHHHHHh--cCCCccHHHHHhhhhHHHHHHHH-hCCCHH
Confidence 88999999999999999999999996 6899988 59999988631 25679988655 47999999995 998653
No 55
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.64 E-value=8.6e-16 Score=122.82 Aligned_cols=133 Identities=11% Similarity=0.016 Sum_probs=105.7
Q ss_pred chHHHHHHHHHHcCCceEEeccc-----cCcccEEEecChhHHHHhhhcCCCCCCCChhhhh----------hhhhccCc
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPW-----FAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRM----------ILEPFGDG 98 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~-----~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~----------~~~~~g~~ 98 (208)
+++..+.++ ++||||+++..+. +|+.+++++++|+.+++|+.+. ..|++++.... .....+.+
T Consensus 38 ~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (433)
T 3ivy_A 38 LPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYENGVIPRFKNDIAREDIEVQRFV 115 (433)
T ss_dssp CCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTTCSCCCCCTTCCHHHHHGGGGS
T ss_pred CccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcccccccccccccccccccccCC
Confidence 478888888 7899999983110 4557999999999999999765 56766553211 11234678
Q ss_pred ccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCC
Q 036716 99 VFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGID 175 (208)
Q Consensus 99 i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~ 175 (208)
++..+|+.|+++||+++++|+++.++.+ .+.+++. ++.+++.+.+ ++++|+.+.+ ..+++++|+.+ ||.+
T Consensus 116 l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~l-~G~~ 186 (433)
T 3ivy_A 116 MLNMDAPHHTRLRKIISRGFTPRAVGRL-HDELQER-AQKIAAEAAA----AGSGDFVEQVSCELPLQAIAGL-LGVP 186 (433)
T ss_dssp GGGCCTTHHHHHHHHHGGGSCHHHHHTT-HHHHHHH-HHHHHHHHHH----HCEEEHHHHTTSHHHHHHHHHH-HTCC
T ss_pred ccccChHHHHHHHHHHHHhhCHHHHHHH-HHHHHHH-HHHHHHHHhh----CCCeeHHHHHHHHHHHHHHHHH-cCCC
Confidence 8999999999999999999999999996 6899888 5999998863 3469998887 99999999996 8864
No 56
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.63 E-value=1.1e-15 Score=122.77 Aligned_cols=131 Identities=13% Similarity=0.133 Sum_probs=105.8
Q ss_pred hHHHHHHHHHHcCCce--EEeccc-cCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh---------------hhcc
Q 036716 35 LHEFATRVLQKSRGTL--EFKGPW-FAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL---------------EPFG 96 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~--~~~~~~-~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~---------------~~~g 96 (208)
++..+.++ ++|||++ ++ . +++.+++++++++.+++++.+. ..|++++...... +.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~---~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~ 121 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVA---PDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLV 121 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECC---TTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSS
T ss_pred chHHHHHH-HhcCCeecccc---cCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccc
Confidence 67777777 6889999 88 6 6788999999999999999776 6677665321100 1234
Q ss_pred CcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCC
Q 036716 97 DGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGID 175 (208)
Q Consensus 97 ~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~ 175 (208)
++++..+|+.|+++||+++++|++++++.+ .+.++++ ++.+++.+.+ .++++|+.+.+ ..+++++|+.+ ||.+
T Consensus 122 ~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G~~ 195 (450)
T 3tkt_A 122 ESLVQMDAPKHPKLRRLTQDWFMPKNLARL-DGEIRKI-ANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LGVP 195 (450)
T ss_dssp CCGGGCCTTHHHHHHHHHHTTTSHHHHGGG-HHHHHHH-HHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TTCC
T ss_pred cCcccCCCHHHHHHHHHhhhhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cCCC
Confidence 688899999999999999999999999996 6899998 5999998874 26689988877 69999999996 8975
Q ss_pred C
Q 036716 176 P 176 (208)
Q Consensus 176 ~ 176 (208)
.
T Consensus 196 ~ 196 (450)
T 3tkt_A 196 P 196 (450)
T ss_dssp G
T ss_pred h
Confidence 4
No 57
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.63 E-value=6.8e-16 Score=122.09 Aligned_cols=131 Identities=11% Similarity=0.027 Sum_probs=103.4
Q ss_pred chHHHHHHHHHHc--CCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh--hhccCcccccCChhHHH
Q 036716 34 QLHEFATRVLQKS--RGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL--EPFGDGVFAADGNLWKM 109 (208)
Q Consensus 34 ~~~~~~~~~~~~y--G~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~--~~~g~~i~~~~g~~w~~ 109 (208)
+++..+.+++++| |+++++ +.++ +.++++||+.+++|+.+. +.|.+++...... ...+.++++.+|+.|++
T Consensus 20 ~p~~~~~~l~~~Y~~Gpv~~~---~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 94 (398)
T 4fb2_A 20 TPHAFFEALRDEAETTPIGWS---EAYG-GHWVVAGYKEIQAVIQNT-KAFSNKGVTFPRYETGEFELMMAGQDDPVHKK 94 (398)
T ss_dssp SSHHHHHHHHHHHTTCSEEEE---CGGG-CEEEECSHHHHHHHHTCC-SSEEGGGCSSSCC----CCCTTTTCCTTHHHH
T ss_pred ChhHHHHHHHhcCCCCCeEEe---cCCC-CEEEEccHHHHHHHHhCh-hhccCCcccccCCCCcccccCcccCCchHHHH
Confidence 5788999999999 999999 7765 589999999999999544 6777766433211 22235667889999999
Q ss_pred HHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHH-HHHHHHHHHHHHhhcCCC
Q 036716 110 QRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDV-FQRFTFDNICMSVLGIDP 176 (208)
Q Consensus 110 ~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~i~~~~fg~~~ 176 (208)
+|++++++|+++.++.+ .+.++++ ++.+++.+.+ ++++|+... +..+++++++. +||.+.
T Consensus 95 ~R~~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~ 155 (398)
T 4fb2_A 95 YRQLVAKPFSPEATDLF-TEQLRQS-TNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPP 155 (398)
T ss_dssp HHHHHHTTTCHHHHHTT-HHHHHHH-HHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCG
T ss_pred HHHHHHHhhCHHHHHHH-HHHHHHH-HHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCH
Confidence 99999999999999996 6888888 5888888753 345887544 47899999999 689765
No 58
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.61 E-value=2.6e-15 Score=119.87 Aligned_cols=146 Identities=9% Similarity=0.013 Sum_probs=109.7
Q ss_pred cccchHHHHHc-c-cchHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChh-hh-------
Q 036716 21 RTRMLSTLVLN-A-HQLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPD-LR------- 89 (208)
Q Consensus 21 ~~G~~~~~~~~-~-~~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~-~~------- 89 (208)
++|++.+.... . .+++..+.++.+ ||+++++ +. |+.+++++++++.+++++.+. ..|++++. ..
T Consensus 11 ~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~~~~~~~~~ 85 (428)
T 1cpt_A 11 IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMA---HIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSEILYDQNNE 85 (428)
T ss_dssp HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEE---CCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHH
T ss_pred hhcccCChhhhcccCCccHHHHHHHH-hCCeeec---cccCCCCeEEEccHHHHHHHHcCc-hhccCccccccCCccccc
Confidence 67754332101 1 246777777765 7999999 76 678999999999999999765 56776553 11
Q ss_pred h-hhhhc------cCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHH-HHH
Q 036716 90 M-ILEPF------GDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDV-FQR 161 (208)
Q Consensus 90 ~-~~~~~------g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~-~~~ 161 (208)
. +.+.. ++++++.+|+.|+++||+++++|++++++.+ .+.++++ ++.+++.+.+ .++++|+.+. +..
T Consensus 86 ~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~ 160 (428)
T 1cpt_A 86 AFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKL-EENIRRI-AQASVQRLLD---FDGECDFMTDCALY 160 (428)
T ss_dssp HHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGG-HHHHHHH-HHHHHHHHHT---SSSEEEHHHHTTTT
T ss_pred chhccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHH-HHHHHHH-HHHHHHHHHH---hCCCeehHHHHHhh
Confidence 1 10113 3578889999999999999999999999996 6899988 5999998864 2357999754 567
Q ss_pred HHHHHHHHHhhcCCCC
Q 036716 162 FTFDNICMSVLGIDPN 177 (208)
Q Consensus 162 ~~~~~i~~~~fg~~~~ 177 (208)
+++|+|+.+ ||.+.+
T Consensus 161 ~~~~vi~~~-fG~~~~ 175 (428)
T 1cpt_A 161 YPLHVVMTA-LGVPED 175 (428)
T ss_dssp HHHHHHHHH-HTCCGG
T ss_pred hHHHHHHHH-cCCCHh
Confidence 999999999 998754
No 59
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.60 E-value=5e-15 Score=117.62 Aligned_cols=127 Identities=15% Similarity=0.171 Sum_probs=100.1
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhh--hccCcccccCChhHHHHH
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILE--PFGDGVFAADGNLWKMQR 111 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~~i~~~~g~~w~~~R 111 (208)
+++..+.++.+ ||++ .+ ++.+.+++++|+.+++++.+. +.|++++... ... ..++++++.+|+.|+++|
T Consensus 29 ~p~~~~~~l~~-~gpv-~~-----~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~R 99 (411)
T 2jjn_A 29 ALLDWLGTMRE-KQPV-WQ-----DRYGVWHVFRHADVQTVLRDT-ATFSSDPTRV-IEGASPTPGMIHEIDPPEHRALR 99 (411)
T ss_dssp HHHHHHHHHHH-HCSE-EE-----CTTSCEEECSHHHHHHHHHCT-TTEESCGGGG-STTCCCCTTCGGGCCTTHHHHHH
T ss_pred ChHHHHHHHHH-hCCc-cc-----CCCCeEEECCHHHHHHHHcCc-ccccCccccc-CCcccccccccccCCchHHHHHH
Confidence 36777778765 9998 33 456899999999999999876 5688776432 212 345788889999999999
Q ss_pred HhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHH-HHHHHHHHHHHHHhhcCCCCC
Q 036716 112 KMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQD-VFQRFTFDNICMSVLGIDPNY 178 (208)
Q Consensus 112 k~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~i~~~~fg~~~~~ 178 (208)
++++++|+++.++.+ .+.+++. ++.+++. .++++|+.+ ....+++|+|+.+ ||.+.+.
T Consensus 100 ~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~------~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~ 158 (411)
T 2jjn_A 100 KVVSSAFTPRTISDL-EPRIRDV-TRSLLAD------AGESFDLVDVLAFPLPVTIVAEL-LGLPPMD 158 (411)
T ss_dssp HHHHHHSCHHHHHTT-HHHHHHH-HHHHHHT------SCSEEEHHHHTTTHHHHHHHHHH-HTCCSCC
T ss_pred HHhhhhcCHHHHHHH-HHHHHHH-HHHHHhc------CCCceeHHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 999999999999996 6888888 5888776 244799984 4568999999999 9988654
No 60
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.59 E-value=4e-15 Score=118.48 Aligned_cols=129 Identities=9% Similarity=0.082 Sum_probs=103.2
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh-----hhhh---hhh--c-cCccccc
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD-----LRMI---LEP--F-GDGVFAA 102 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~-----~~~~---~~~--~-g~~i~~~ 102 (208)
+++..+.++ ++||++++ . ++.+++++++|+.+++|+.++ + |++++. +... ... + ++++++.
T Consensus 27 ~p~~~~~~l-~~~Gpv~~-~----~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (419)
T 1q5d_A 27 DPFPAIERL-REATPIFY-W----DEGRSWVLTRYHDVSAVFRDE-R-FAVSREEWESSAEYSSAIPELSDMKKYGLFGL 98 (419)
T ss_dssp CCHHHHHHH-HHHCSEEE-E----TTTTEEEECSHHHHHHHHTCT-T-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred ChHHHHHHH-HhhCCccc-c----CCCCEEEEecHHHHHHHHcCC-C-ccccccccccccccccccchhhhhcccccccC
Confidence 467788888 78999986 2 467899999999999999887 4 888761 2211 121 2 6778889
Q ss_pred CChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHH-HHHHHHHHHHHHHhhcCCCC
Q 036716 103 DGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQD-VFQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 103 ~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~i~~~~fg~~~~ 177 (208)
+|+.|+++||+++++|+.+.++.+ .+.++++ ++.+++.+.+ ++++|+.+ .+..+++|+|+.+ ||.+.+
T Consensus 99 ~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~ 167 (419)
T 1q5d_A 99 PPEDHARVRKLVNPSFTSRAIDLL-RAEIQRT-VDQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LKVPAE 167 (419)
T ss_dssp CHHHHHHHHHHHGGGGSHHHHGGG-HHHHHHH-HHHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TTCCGG
T ss_pred CchHHHHHHHHHHHhcCHHHHHHH-HHHHHHH-HHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 999999999999999999999996 6899888 5999998863 23799875 4589999999998 998653
No 61
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.58 E-value=1.3e-14 Score=114.66 Aligned_cols=128 Identities=12% Similarity=0.070 Sum_probs=100.8
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhh---------hhhhccCcccccCC
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRM---------ILEPFGDGVFAADG 104 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~---------~~~~~g~~i~~~~g 104 (208)
+++..+.++ ++||++++ . +.+.++++||+.+++|+.++ .|.+++.... ..+++++++++.+|
T Consensus 14 ~p~~~~~~l-~~yGpv~~-~-----g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 84 (397)
T 3buj_A 14 DPYPSYHWL-LRHDPVHR-G-----AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDIILFQDE 84 (397)
T ss_dssp CCHHHHHHH-HHHCSEEE-C-----GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCT
T ss_pred CchHHHHHH-HhcCCeee-C-----CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccccccCCc
Confidence 366677666 69999875 3 46899999999999999763 5776653221 11233788889999
Q ss_pred hhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHH-HHHHHHHHHHHHHhhcCCCC
Q 036716 105 NLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQD-VFQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 105 ~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~i~~~~fg~~~~ 177 (208)
+.|+++||+++++|+++.++.+ .+.++++ ++.+++.+.+ ++++|+.+ .+..+++|+|+.+ ||.+.+
T Consensus 85 ~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~ 151 (397)
T 3buj_A 85 PDHGRLRGVVGPAFSPSALRRL-EPVIAGT-VDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAA 151 (397)
T ss_dssp THHHHHHHHHGGGSSTTTTGGG-HHHHHHH-HHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGG
T ss_pred hhHHHHHHHHHHhcCHHHHHHH-HHHHHHH-HHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHH
Confidence 9999999999999999999996 6889888 5999998863 34799875 5578999999999 998764
No 62
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.57 E-value=1.7e-14 Score=114.03 Aligned_cols=126 Identities=10% Similarity=0.126 Sum_probs=94.9
Q ss_pred HHHHHcCCceEEeccccC-cc---cEEEecChhHHHHhhhcCCCCCCCChh---------hhhhhh-hccCcccccCChh
Q 036716 41 RVLQKSRGTLEFKGPWFA-KM---DFIITSDPMNVHYISSKNFSNYPKGPD---------LRMILE-PFGDGVFAADGNL 106 (208)
Q Consensus 41 ~~~~~yG~i~~~~~~~~~-~~---~~v~v~~p~~~~~i~~~~~~~~~~~~~---------~~~~~~-~~g~~i~~~~g~~ 106 (208)
++.++ |+++++ +++ +. ++++++||+.+++++.++ ..|.+++. +..... ..+.++++.+|+.
T Consensus 21 ~l~~~-Gpv~~~---~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 95 (398)
T 1lfk_A 21 ELLAA-GALTRV---TIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPE 95 (398)
T ss_dssp HHHTS-CSEEEE---C------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGCCTTH
T ss_pred HHHhc-CCcccc---ccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCccccCCHH
Confidence 35555 999998 654 44 899999999999999433 34665543 111111 2357888889999
Q ss_pred HHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHH-HHHHHHHHHhhcCCCC
Q 036716 107 WKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQR-FTFDNICMSVLGIDPN 177 (208)
Q Consensus 107 w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~-~~~~~i~~~~fg~~~~ 177 (208)
|+++||+++++|+.+.++.+ .+.++++ ++.+++.+.+ .++++|+.+.+.. +++++++. +||.+.+
T Consensus 96 ~~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 161 (398)
T 1lfk_A 96 HTRLRRKLTPGFTLRKMQRM-APYIEQI-VNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRD 161 (398)
T ss_dssp HHHHHHHHGGGGCHHHHHHH-HHHHHHH-HHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG
T ss_pred HHHHHHHHHhhhCHHHHHHH-HHHHHHH-HHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 99999999999999999996 6899988 5999998863 3567999999887 99999998 5998764
No 63
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.57 E-value=1.4e-14 Score=113.48 Aligned_cols=125 Identities=12% Similarity=0.100 Sum_probs=98.0
Q ss_pred HHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh-----hhhhh--h--h---ccCcccccC
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD-----LRMIL--E--P---FGDGVFAAD 103 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~-----~~~~~--~--~---~g~~i~~~~ 103 (208)
+..+.++ ++|||++++ + +.+++++|+++++++.+. +.|++++. +.... . . .|+++++.+
T Consensus 2 ~~~~~~l-r~~Gpv~~~------g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 72 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD------G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD 72 (368)
T ss_dssp HHHHHHH-HHHCSEEEC------S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC
T ss_pred CHHHHHH-HhcCCeEeE------C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCC
Confidence 3455566 589998755 2 589999999999999875 56877753 22110 1 1 237788899
Q ss_pred ChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 104 GNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 104 g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
|+.|+++||+++++|+++.++.+ .+.++++ ++.+++.+ + .+ ++|+.+.+ ..+++|+|+.+ ||.+.+
T Consensus 73 g~~h~~~R~~~~~~f~~~~~~~~-~~~i~~~-~~~l~~~l-~---~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~ 139 (368)
T 1io7_A 73 PPLHDELRSMSADIFSPQKLQTL-ETFIRET-TRSLLDSI-D---PR-EDDIVKKLAVPLPIIVISKI-LGLPIE 139 (368)
T ss_dssp TTHHHHHHGGGTTTTCHHHHHHH-HHHHHHH-HHHHHHTC-C---TT-SEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred ChHHHHHHHHHHhhcCHHHHHHH-HHHHHHH-HHHHHHHh-h---cC-CccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 99999999999999999999996 6899888 59998888 3 23 69999866 78999999999 998754
No 64
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.56 E-value=2.9e-14 Score=113.35 Aligned_cols=129 Identities=12% Similarity=0.053 Sum_probs=98.9
Q ss_pred cchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh----------hhccCccccc
Q 036716 33 HQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL----------EPFGDGVFAA 102 (208)
Q Consensus 33 ~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~----------~~~g~~i~~~ 102 (208)
.+++.++.++ ++|||++++ +.| .+++++|+.+++|+.+. ..+.+++...... ...++++++.
T Consensus 29 ~~p~~~~~~l-r~~gpv~~~---~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (418)
T 3r9b_A 29 ADPYPIYDRI-RRGGPLALP---EAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL 100 (418)
T ss_dssp TCCHHHHHHH-HHHCCEEEG---GGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC
T ss_pred cCchHHHHHH-HhcCCEEEC---CCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc
Confidence 3577788777 688999987 654 89999999999999765 4444444222111 1245788999
Q ss_pred CChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHH-HHHHHHHHHHHHhhcCCCC
Q 036716 103 DGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDV-FQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 103 ~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~i~~~~fg~~~~ 177 (208)
+|+.|+++||+++++|+++.++.+ .+.++++ ++.+++ +. +++++|+.+. ...+++++|+. +||.+.+
T Consensus 101 dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 168 (418)
T 3r9b_A 101 DPPDHTRLRGLVSKAFAPRVIKRL-EPEITAL-VDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPIE 168 (418)
T ss_dssp CTTHHHHHHHHHHGGGSHHHHGGG-HHHHHHH-HHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred CCchHHHHHHHhhhhhCHHHHHHH-HHHHHHH-HHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCHH
Confidence 999999999999999999999996 6889888 588888 74 2347997654 56899999999 8998654
No 65
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.56 E-value=3.7e-15 Score=119.44 Aligned_cols=143 Identities=12% Similarity=0.077 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhhhccC-cccccCChhHHHHHHh
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILEPFGD-GVFAADGNLWKMQRKM 113 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~g~-~i~~~~g~~w~~~Rk~ 113 (208)
++.++.++ ++|||++++ ..++ .+++++|+.+++|+.++ +.|.+++........++. ++++.+|+.|+++||+
T Consensus 55 p~~~~~~l-r~~gpv~~~---~~~~--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~ 127 (441)
T 3nc3_A 55 PYAYFSQL-REEDPVHYE---ESID--SYFISRYHDVRYILQHP-DIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRI 127 (441)
T ss_dssp GGGTHHHH-HHHCSEEEE---TTTT--EEEECCHHHHHHHHHCT-TTEECCCTTSCCCCSCC-------------CCHHH
T ss_pred hHHHHHHH-HhcCCEEEe---CCCC--EEEEcCHHHHHHHhcCc-ccccccccccccccccCCCccccCCcHHHHHHHHH
Confidence 55566655 689999988 4434 89999999999999877 457776543332334554 5788899999999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccH-HHHHHHHHHHHHHHHhhcCCCCCCCCCCCchHHHHHH
Q 036716 114 IHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDL-QDVFQRFTFDNICMSVLGIDPNYLSFEFPQVAYANAF 192 (208)
Q Consensus 114 l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~-~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~ 192 (208)
++++|+++.++.+ .+.+++. ++.+++.|. +++++|+ .+....+++++|+. +||.+.+ +..++.+..
T Consensus 128 ~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~------~~~~~~~~~ 194 (441)
T 3nc3_A 128 VVRSFIGDALDHL-SPLIKQN-AENLLAPYL----ERGKSDLVNDFGKTFAVCVTMD-MLGLDKR------DHEKISEWH 194 (441)
T ss_dssp HHHHHHHTHHHHH-HHHHHHH-HHHHHTTTT----TTTEEECCCCCHHHHHHHHHHH-HTTCCGG------GHHHHHHHH
T ss_pred HHhhcCHHHHHHH-HHHHHHH-HHHHHHHHH----hcCCCcHHHHHHHHHHHHHHHH-HcCCCHH------HHHHHHHHH
Confidence 9999999999996 6889888 588888775 2456886 45566799999999 5887653 233455544
Q ss_pred HHHHH
Q 036716 193 NATEQ 197 (208)
Q Consensus 193 ~~~~~ 197 (208)
..+..
T Consensus 195 ~~~~~ 199 (441)
T 3nc3_A 195 SGVAD 199 (441)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 66
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.55 E-value=8.4e-15 Score=116.49 Aligned_cols=131 Identities=8% Similarity=0.087 Sum_probs=101.0
Q ss_pred chHHHHHHHHHHcCCceEEeccccCc--ccEEEecChhHHHHhhhcCCCCCCCChhhhhhh--hh---c-cCcccccCCh
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAK--MDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL--EP---F-GDGVFAADGN 105 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~--~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~--~~---~-g~~i~~~~g~ 105 (208)
+++..+.++.+ ||||+++ ...+ .+++++++++.+++++.+. +.|++++...... .. . ++++++.+|+
T Consensus 38 dp~~~~~~lr~-~gpV~~~---~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 112 (415)
T 3mgx_A 38 ERHARWRELAA-EDAMVWS---DPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHE 112 (415)
T ss_dssp THHHHHHHHHH-HTCCEEE---CSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHH
T ss_pred ChhHHHHHHHh-cCCEeec---cCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcH
Confidence 57778877765 9999988 4234 7899999999999999654 5677654321111 11 2 5678889999
Q ss_pred hHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCC
Q 036716 106 LWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDP 176 (208)
Q Consensus 106 ~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~ 176 (208)
.|+++||+++++|+++.++.+ .+.++++ ++.+++.+.+ ++++|+.+.+ ..+++++|+. +||.+.
T Consensus 113 ~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~ 177 (415)
T 3mgx_A 113 QHRKLRKLVGPLLSRAAARKL-AERVRIE-VGDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPA 177 (415)
T ss_dssp HHHHHHHHHGGGSSHHHHHHS-HHHHHHH-HHHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCG
T ss_pred HHHHHHHHhHhhhCHHHHHHH-HHHHHHH-HHHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCH
Confidence 999999999999999999996 6888888 5888887753 3469988777 6799999998 588653
No 67
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.54 E-value=3e-14 Score=111.50 Aligned_cols=119 Identities=12% Similarity=0.138 Sum_probs=94.0
Q ss_pred HHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh-hh-hh-----h-hhcc----CcccccCC
Q 036716 37 EFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD-LR-MI-----L-EPFG----DGVFAADG 104 (208)
Q Consensus 37 ~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~-~~-~~-----~-~~~g----~~i~~~~g 104 (208)
..+.++ ++|||++++ . | .+++++|+.+++++.++ +.|++++. +. .+ . +..| +++++.+|
T Consensus 3 ~~~~~l-r~~gpv~~~---~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 73 (367)
T 3b4x_A 3 DWFKQM-RKESPVYYD---G-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDP 73 (367)
T ss_dssp HHHHHH-HHHCSEEEC---S-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCT
T ss_pred HHHHHH-HHcCCceee---C-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCc
Confidence 345555 589999988 5 2 89999999999999876 56777642 22 12 2 3444 78888999
Q ss_pred hhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCC
Q 036716 105 NLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGID 175 (208)
Q Consensus 105 ~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~ 175 (208)
+.|+++||+++++|+++.++. +.+++. ++.+++.+. | ++|+.+.+ ..+++|+|+. +||.+
T Consensus 74 ~~h~~~R~~~~~~fs~~~l~~---~~i~~~-~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~ 134 (367)
T 3b4x_A 74 PLHDELRNLTADAFNPSNLPV---DFVREV-TVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN 134 (367)
T ss_dssp THHHHHHHTTGGGGSGGGSCH---HHHHHH-HHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred hhHHHHHHHHHHhcCHhhhcc---hHHHHH-HHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC
Confidence 999999999999999999877 677777 588888775 3 49998754 8999999999 79987
No 68
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.53 E-value=1.4e-14 Score=112.39 Aligned_cols=113 Identities=16% Similarity=0.117 Sum_probs=90.5
Q ss_pred HHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh-hhhhhhhccCcccccCChhHHHHHHhhhcccchhH
Q 036716 44 QKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD-LRMILEPFGDGVFAADGNLWKMQRKMIHSVMKHNK 122 (208)
Q Consensus 44 ~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~-~~~~~~~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~ 122 (208)
++|||++++ ..+++++|+++++|+.++ +.|++++. +. ... .++++++.+|+.|+++||+++++|+++.
T Consensus 2 r~~gpv~~~--------g~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~-~~~~l~~~~g~~~~~~R~~~~~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD--------GAWHVYKYSDVKHVLMND-KIFSSNPGNRY-SNA-GGISFITMDNPEHKEFRDISAPYFLPSK 70 (343)
T ss_dssp -CCCCEEET--------TEEEECSHHHHHHHHHCT-TTEESSCSSCC-C----CCGGGGCCHHHHHHHHHHHHHHHSHHH
T ss_pred CCcCCeeee--------CeEEEcCHHHHHHHHhCh-hhcccCCcCCC-CCc-cccccccCCchHHHHHHHHhhhhcCHHH
Confidence 589998754 289999999999999876 56777652 21 122 3678888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 123 FESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 123 l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
++.+ .+.++++ ++.+++.|. ++|+.+.+ ..+++|+|+.+ ||.+.+
T Consensus 71 l~~~-~~~i~~~-~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~ 116 (343)
T 2rfb_A 71 INDY-KDFIEET-SNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDS 116 (343)
T ss_dssp HGGG-HHHHHHH-HHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred HHHH-HHHHHHH-HHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHH
Confidence 9996 6888888 588887774 58998865 89999999999 998653
No 69
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.51 E-value=8.2e-14 Score=110.02 Aligned_cols=131 Identities=11% Similarity=-0.011 Sum_probs=101.7
Q ss_pred cchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhh-hh-hhccCcccccCChhHHHH
Q 036716 33 HQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRM-IL-EPFGDGVFAADGNLWKMQ 110 (208)
Q Consensus 33 ~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~-~~-~~~g~~i~~~~g~~w~~~ 110 (208)
.+++..+.+++++ |+++++ ..+ .+.++++||+.+++++.+. +.|.+++.... .. ...+.++++.+|+.|+++
T Consensus 24 ~~p~~~~~~l~~~-Gpv~~~---~~~-~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~ 97 (396)
T 3oft_A 24 QDYFAAWKTLLDG-PGLVWS---TAN-GGHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAF 97 (396)
T ss_dssp TCHHHHHHGGGGS-CSEEEE---CST-TSEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHH
T ss_pred cChHHHHHHHHhc-CCeeee---cCC-CCEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccCCcHHHHH
Confidence 3578889999888 999998 665 4589999999999999765 57777653211 11 223567788999999999
Q ss_pred HHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCC
Q 036716 111 RKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDP 176 (208)
Q Consensus 111 Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~ 176 (208)
||+++++|+++.++.+ .+.+++. ++.+++.|.+ ++++|+...+ ..++.++++. +||.+.
T Consensus 98 R~~~~~~f~~~~l~~~-~~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~ 157 (396)
T 3oft_A 98 RTPVMKGLASRFVVAL-EPKVQAV-ARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPL 157 (396)
T ss_dssp HHHHHHHTCHHHHHHH-HHHHHHH-HHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCG
T ss_pred HHHhhhhhCHHHHHHH-HHHHHHH-HHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCH
Confidence 9999999999999996 6899888 5999998863 3368876555 6678888877 578654
No 70
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.51 E-value=1.1e-14 Score=115.15 Aligned_cols=128 Identities=13% Similarity=0.126 Sum_probs=100.7
Q ss_pred chHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCC-C-Chhh--hhh-----hhhccCcccccC
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYP-K-GPDL--RMI-----LEPFGDGVFAAD 103 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~-~-~~~~--~~~-----~~~~g~~i~~~~ 103 (208)
+++..+.++ ++||+++++ ++ ++.+.++++||+++++++.++ .|. + ++.. ... .+..+.++++.
T Consensus 17 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 89 (396)
T 1n40_A 17 RIPDAVAEL-RTREPIRKV---RTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI- 89 (396)
T ss_dssp SCCHHHHHH-HHHCSEEEE---ECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred CccHHHHHH-HHhCCeeEe---ecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH-
Confidence 467788888 999999999 76 788999999999999999875 365 5 4321 111 12245666665
Q ss_pred ChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCCC
Q 036716 104 GNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 104 g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~~ 177 (208)
.|+++||+++++|+++ ++.+ .+.++++ ++.+++.+.+ .++++|+.+.+ ..+++|+|+. +||.+.+
T Consensus 90 --~h~~~R~~~~~~fs~~-~~~~-~~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 155 (396)
T 1n40_A 90 --ADAGLRKAVMKAITPK-APGL-EQFLRDT-ANSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLGIPQE 155 (396)
T ss_dssp --HHTTCHHHHHHHTSSC-STTH-HHHHHHH-HHHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHTCCGG
T ss_pred --HHHHHHHHHHHhhChH-HHHh-HHHHHHH-HHHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhCCChh
Confidence 9999999999999999 9996 6899888 5999998874 25679988655 5899999999 7998754
No 71
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.51 E-value=5.3e-13 Score=106.44 Aligned_cols=132 Identities=13% Similarity=0.064 Sum_probs=102.4
Q ss_pred cchHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhcCCCCCCCChhhh-----h-----hh-hhccCccc
Q 036716 33 HQLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSKNFSNYPKGPDLR-----M-----IL-EPFGDGVF 100 (208)
Q Consensus 33 ~~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~-----~-----~~-~~~g~~i~ 100 (208)
.+++..+.++.++ |||+++ .. ++.+++++++++.+++++.+. +.|++++... . .. ...+++++
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~---~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 112 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYC---ADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFI 112 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEE---SCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGG
T ss_pred CCccHHHHHHHhc-CCeeec---cCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCccc
Confidence 3578888888766 999998 55 457799999999999999876 5666654211 1 11 23356788
Q ss_pred ccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHH-HHHHHHHHHHHhhcCCC
Q 036716 101 AADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVF-QRFTFDNICMSVLGIDP 176 (208)
Q Consensus 101 ~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~-~~~~~~~i~~~~fg~~~ 176 (208)
..+|+.|+++|++++++|+++.++.+ .+.+++. ++.+++.+. .++++|+.+.+ ..+++++++. +||.+.
T Consensus 113 ~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~ 182 (426)
T 3rwl_A 113 AMDRPRHDEQRKAVSPIVAPANLAAL-EGTIRER-VSKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPF 182 (426)
T ss_dssp GCCTTHHHHHHHHHGGGGCHHHHHHH-HHHHHHH-HHHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred ccCchHHHHHHHHhhhhhCHHHHHHH-HHHHHHH-HHHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCH
Confidence 89999999999999999999999996 6899888 588888774 35679976665 6899999887 799754
No 72
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.48 E-value=1.5e-13 Score=109.41 Aligned_cols=132 Identities=14% Similarity=0.026 Sum_probs=100.5
Q ss_pred chHHHHHHHHHHcC-CceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhh-hhh-hhccCcccccCChhHHHH
Q 036716 34 QLHEFATRVLQKSR-GTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLR-MIL-EPFGDGVFAADGNLWKMQ 110 (208)
Q Consensus 34 ~~~~~~~~~~~~yG-~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~-~~~-~~~g~~i~~~~g~~w~~~ 110 (208)
+++.++.++.+++| +++++ ..++ +.++++||+.+++|+.+. +.|.+++... ... ...+.++++.+|+.|+++
T Consensus 39 dp~~~~~~lr~~~G~pv~~~---~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~ 113 (421)
T 3lxh_A 39 GFHEAWKRVQQPDTPPLVWT---PFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPY 113 (421)
T ss_dssp CHHHHHHHHCCTTCCSEEEE---SSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHH
T ss_pred ChhHHHHHHHhcCCCCeEec---cCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCCcHHHHHH
Confidence 57888888876655 89988 6555 589999999999999554 6777765321 111 223567888999999999
Q ss_pred HHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHH-HHHHHHHHHHHHhhcCCCC
Q 036716 111 RKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDV-FQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 111 Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~i~~~~fg~~~~ 177 (208)
|++++++|+++.++.+ .+.+++. ++.+++.|.+ ++++|+... ...+++++++.+ ||.+.+
T Consensus 114 R~~~~~~fs~~~l~~~-~~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~~-~G~~~~ 174 (421)
T 3lxh_A 114 RKAIDKGLNLAEIRKL-EDQIRTI-AVEIIEGFAD----RGHCEFGSEFSTVFPVRVFLAL-AGLPVE 174 (421)
T ss_dssp HHHHHHHHSHHHHHTT-HHHHHHH-HHHHHHTTTT----TSEEEHHHHTTTTHHHHHHHHH-HTCCGG
T ss_pred HHHHhhhcCHHHHHHH-HHHHHHH-HHHHHHHHhh----cCCeehHHHHHHHHHHHHHHHH-cCCCHH
Confidence 9999999999999996 6888888 5888888752 346897554 466888888875 887553
No 73
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.44 E-value=1.7e-12 Score=102.50 Aligned_cols=128 Identities=10% Similarity=0.030 Sum_probs=100.2
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhhh--hccCcccccCChhHHHHH
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMILE--PFGDGVFAADGNLWKMQR 111 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~~i~~~~g~~w~~~R 111 (208)
+++..+.++.+ +||++++ ..| .+++++++.+++++... .|.+++.+....+ ..+++++..+|+.|+++|
T Consensus 21 dp~~~~~~lr~-~~pv~~~---~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R 91 (394)
T 2wiy_A 21 NPYPWYRRLQQ-DHPVHKL---EDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSDPPHHTVLR 91 (394)
T ss_dssp CCHHHHHHHHH-HCSEEEC---TTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHH
T ss_pred CccHHHHHHHh-cCCeEEe---cCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCCchHHHHHH
Confidence 36777777755 5899877 432 78999999999999654 4655443322222 235778889999999999
Q ss_pred HhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHHHHHHHHHHHHHHhhcCCC
Q 036716 112 KMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDVFQRFTFDNICMSVLGIDP 176 (208)
Q Consensus 112 k~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fg~~~ 176 (208)
|+++++|+++.++.+ .+.+++. ++.+++.+. .++++|+.+.+..+++++++..+||.+.
T Consensus 92 ~~~~~~fs~~~~~~~-~~~i~~~-~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~ 150 (394)
T 2wiy_A 92 RQTNKWFTPKLVDGW-VRTTREL-VGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPE 150 (394)
T ss_dssp HHHHTTCSHHHHHHH-THHHHHH-HHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCC
T ss_pred HHHHhccCHHHHHHH-HHHHHHH-HHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCH
Confidence 999999999999996 6888888 588888775 3567999999999999999999999764
No 74
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.36 E-value=9.5e-13 Score=104.66 Aligned_cols=128 Identities=11% Similarity=0.072 Sum_probs=95.7
Q ss_pred chHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh-hh--------hhhhhccCcccccCC
Q 036716 34 QLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD-LR--------MILEPFGDGVFAADG 104 (208)
Q Consensus 34 ~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~-~~--------~~~~~~g~~i~~~~g 104 (208)
+++.. +..++||+++++ ..+... +++++++.+++|+.++ + +..... .. .....++++++..+|
T Consensus 34 ~P~~~--~~lr~~gpv~~~---~~g~~~-~vv~~~~~v~~vL~d~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 105 (416)
T 3p3o_A 34 FSWDS--PEVAEAREKSWI---ARTPLA-LLVLRYAEADQLARDK-R-LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDG 105 (416)
T ss_dssp CCTTS--HHHHHHHHHCSE---EECSSS-EEECSHHHHHHHHHCT-T-EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCH
T ss_pred CCchH--HHHHHhCCcccc---ccCCCc-eEEeCHHHHHHHHcCc-c-cccCCccccccccccccchhhhhcCccccCCc
Confidence 34545 455689999988 655555 9999999999999776 3 433321 11 111234678899999
Q ss_pred hhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHH-HHHHHHHHHHHHHhhcCCCC
Q 036716 105 NLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQD-VFQRFTFDNICMSVLGIDPN 177 (208)
Q Consensus 105 ~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~i~~~~fg~~~~ 177 (208)
++|+++||+++++|+++.++.+ .+.+++. ++.+++.+ + . +++|+.. ....+++++|+. +||.+.+
T Consensus 106 ~~h~~~Rr~~~~~fs~~~l~~~-~~~i~~~-~~~ll~~l-~---~-g~~d~~~~~~~~~~~~vi~~-l~G~~~~ 171 (416)
T 3p3o_A 106 ADHRRLRGLATHPFTPRRITAV-QPFVRST-VEQLIDKL-P---Q-GDFDFVQHFPHPLPALVMCQ-LLGFPLE 171 (416)
T ss_dssp HHHHHHHHTTCGGGSHHHHHHH-HHHHHHH-HHHHHHTC-C---S-SSEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred hHHHHHHHHHHHhhCHHHHHHH-HHHHHHH-HHHHHHhh-c---c-CCccHHHHHHHHHHHHHHHH-HhCCCHH
Confidence 9999999999999999999996 6899888 59998887 2 2 3599654 556799999999 5897543
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.24 E-value=3.7e-11 Score=95.42 Aligned_cols=142 Identities=8% Similarity=-0.006 Sum_probs=101.1
Q ss_pred CCCCccccc---hHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh--hhh
Q 036716 16 FKRSSRTRM---LSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD--LRM 90 (208)
Q Consensus 16 p~~~p~~G~---~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~--~~~ 90 (208)
+.++|.+|. -+.+..+ ++..+.++. ++|||+++ ...+.++|++++.+++|+.+. ..|.+... ...
T Consensus 17 ~~~~P~~~~dp~~~~~~~d---P~~~~~~lR-~~gPV~~~-----~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~ 86 (412)
T 4dnj_A 17 GAGVPHLGIDPFALDYFAD---PYPEQETLR-EAGPVVYL-----DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSD 86 (412)
T ss_dssp STTSCEECCCTTSHHHHHS---CHHHHHHHH-HHCSSEEE-----TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSC
T ss_pred CCCCCccCCCCCCHHHHhC---cHHHHHHHH-hcCCEEEE-----CCCCEEEECCHHHHHHHHcCC-ccccCCCcccccc
Confidence 456777772 3445444 677777764 56999765 456789999999999999765 44543321 111
Q ss_pred hh---hh-ccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccH-HHHHHHHHHH
Q 036716 91 IL---EP-FGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDL-QDVFQRFTFD 165 (208)
Q Consensus 91 ~~---~~-~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~-~~~~~~~~~~ 165 (208)
.. .. .+..++..||++|+++||+++++|+++.++.+ ++.+.+. ++.+++.+.. .++++|+ .+....++++
T Consensus 87 ~~~~~~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~~-~~~i~~~-~~~l~~~~~~---~~~~~D~v~~~~~~~~~~ 161 (412)
T 4dnj_A 87 FKKEKPWRPPSLILEADPPAHTRTRAVLSKVLSPATMKRL-RDGFAAA-ADAKIDELLA---RGGNIDAIADLAEAYPLS 161 (412)
T ss_dssp TTTSCCSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHHH-HHHHHHH-HHHHHHHHHH---TTSEEETCCCCCCHHHHH
T ss_pred ccccccccCCCccccCChHHHHHHHhhcccccCHHHHHHh-hHHHHHH-HHHHHHhhhc---cCCCceeHHHHHhhhhHh
Confidence 11 11 23567788999999999999999999999996 6899888 5888887753 3456774 5667778888
Q ss_pred HHHHHhh
Q 036716 166 NICMSVL 172 (208)
Q Consensus 166 ~i~~~~f 172 (208)
+++.+..
T Consensus 162 ~i~~l~g 168 (412)
T 4dnj_A 162 VFPDAMG 168 (412)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 8888643
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=98.95 E-value=5e-09 Score=83.25 Aligned_cols=131 Identities=12% Similarity=0.003 Sum_probs=90.0
Q ss_pred chHHHHHHHHHHcC-CceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChhhhhhh--hhccCcccccCChhHHHH
Q 036716 34 QLHEFATRVLQKSR-GTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPDLRMIL--EPFGDGVFAADGNLWKMQ 110 (208)
Q Consensus 34 ~~~~~~~~~~~~yG-~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~--~~~g~~i~~~~g~~w~~~ 110 (208)
.++..+.++.++.+ +++.. - .+....+|++.+.+++|+... ..|++........ ......++..|+++|+++
T Consensus 38 ~~~~~~~~lr~~~~~~~~~~---~-~~gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 38 GYHEAWKKVQHPGIPDLIWT---P-FTGGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPY 112 (417)
T ss_dssp CHHHHHHHHSCTTCCSEEEE---S-STTSEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHH
T ss_pred ChHHHHHHHHhhCCCCEEec---C-CCCCEEEECCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCCcHHHHHH
Confidence 46677777765543 34433 1 234578899999999999765 5676543221111 112234566799999999
Q ss_pred HHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHH-HHHHHHHHHHHHHhhcCCC
Q 036716 111 RKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQD-VFQRFTFDNICMSVLGIDP 176 (208)
Q Consensus 111 Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~-~~~~~~~~~i~~~~fg~~~ 176 (208)
||+++++|+++.++.+ ++.+++. ++.+++.+.+ ++++|+.. ....+++.+++.+ +|...
T Consensus 113 Rrll~~~Fs~~~l~~~-~~~i~~~-~~~lld~l~~----~g~~D~v~~~a~~l~~~vi~~l-lg~~~ 172 (417)
T 4dxy_A 113 RKALDKGLNLAKIRKV-EDKVREV-ASSLIDSFAA----RGECDFAAEYAELFPVHVFMAL-ADLPL 172 (417)
T ss_dssp HHHHHHHHCHHHHHTT-HHHHHHH-HHHHHHHHHT----TSEEEHHHHTTTTHHHHHHHHH-TTCCG
T ss_pred HHHhhhhcCHHHHHHH-HHHHHHH-HHHHHHHhhh----cCCeeeHHHHHhhhHHHHHHHH-cCCCH
Confidence 9999999999999996 7999988 5999888863 45688654 4556777777664 66543
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.12 E-value=5.3e-08 Score=76.35 Aligned_cols=128 Identities=9% Similarity=0.105 Sum_probs=82.2
Q ss_pred CCccccchHHHHH--cccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcCCCCCCCChh-h-hh---
Q 036716 18 RSSRTRMLSTLVL--NAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKNFSNYPKGPD-L-RM--- 90 (208)
Q Consensus 18 ~~p~~G~~~~~~~--~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~-~-~~--- 90 (208)
++|++|+...+.. ...+++..+.++.++ ++++. . .+.+++++++.+++|+.++ .|.+++. + ..
T Consensus 42 ~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~---~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~~~~~ 111 (381)
T 2yjn_B 42 GYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRS---R---TETWVVADHATARQVLDDP--AFTRATGRTPEWMRA 111 (381)
T ss_dssp HHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEEC---S---SSCEEECSHHHHHHHHHCS--SEESSCCCCCHHHHH
T ss_pred cccccCCchhhcCchhccCchHHHHHHHhC--CceeC---C---CCEEEEcCHHHHHHHHcCC--CcCCCcccccccccc
Confidence 4789998766532 223577888888765 88876 2 4689999999999999863 5666532 1 01
Q ss_pred ---hhhhccCcccccCChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccCCcccHHHH-HHHHHHHH
Q 036716 91 ---ILEPFGDGVFAADGNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVGIKVDLQDV-FQRFTFDN 166 (208)
Q Consensus 91 ---~~~~~g~~i~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~~~vd~~~~-~~~~~~~~ 166 (208)
....+++++++.||++| +++|+ . ++.+++. ++.+++.+. +++|+... ...+++++
T Consensus 112 ~~~~~~~~~~~l~~~dg~~H-------~~~Ft--~-----~~~i~~~-~~~ll~~~~------g~~Dl~~~~a~~l~~~v 170 (381)
T 2yjn_B 112 AGAPPAEWAQPFRDVHAASW-------EGEVP--D-----VGELAES-FAGLLPGAG------ARLDLVGDFAWQVPVQG 170 (381)
T ss_dssp HTCCHHHHTHHHHHHHHCCC-------CSCCC--C-----CSCHHHH-TSTTSCC------------CCCCCCTHHHHHH
T ss_pred cccccchhhhhhhhCCchhh-------hhccC--C-----hHHHHHH-HHHHHHhcc------CcchHHHHHHHHHHHHH
Confidence 01123567788899999 78888 1 3566776 588887774 25888755 47999999
Q ss_pred HHHHhhcCCCC
Q 036716 167 ICMSVLGIDPN 177 (208)
Q Consensus 167 i~~~~fg~~~~ 177 (208)
|+.+ ||.+.+
T Consensus 171 i~~l-~G~~~~ 180 (381)
T 2yjn_B 171 MTAV-LGAAGV 180 (381)
T ss_dssp HHTC------C
T ss_pred HHHH-cCCCHH
Confidence 9995 998754
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.62 E-value=2.6 Score=25.76 Aligned_cols=51 Identities=6% Similarity=-0.029 Sum_probs=37.8
Q ss_pred ccchHHHHHcccchHHHHHHHHHHcC-CceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 22 TRMLSTLVLNAHQLHEFATRVLQKSR-GTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 22 ~G~~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|++.-.. ...+...+.+++.+|| +|..+. ++.-+|...+.+.++..+..
T Consensus 14 V~NL~~~~~-~~~lk~~L~~lF~~yGG~Vl~Vt----gG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 14 VYNLPANKD-GKSVSNRLRRLSDNCGGKVLSIT----GCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp EESCCTTSC-HHHHHHHHHHHHHTTTCCEEECC----TTCEEEEESSHHHHHHHHHH
T ss_pred EeCCCCcCC-HHHHHHHHHHHHHHcCCeeEEEe----cCEEEEEECCHHHHHHHHHH
Confidence 788877642 2234556789999995 988883 38889999999998887754
No 79
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=60.43 E-value=21 Score=21.85 Aligned_cols=43 Identities=7% Similarity=-0.069 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+++.+||+|..+..+...+.-+|-..+++.++..+..
T Consensus 23 te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~ 65 (111)
T 1whx_A 23 LAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRH 65 (111)
T ss_dssp CHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHH
Confidence 3567889999999998885433334567778899988887754
No 80
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.79 E-value=29 Score=19.61 Aligned_cols=52 Identities=8% Similarity=-0.095 Sum_probs=34.7
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+|+++.-. ..+.+.+++.+||++..+..+.--+.-+|-..+++.+...+..
T Consensus 16 ~V~~l~~~~-----t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~ 67 (85)
T 2ytc_A 16 YVGGLGDTI-----TETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEK 67 (85)
T ss_dssp EEECCTTTS-----CHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHT
T ss_pred EEcCCCCCC-----CHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 456665332 3456788889999987774332223456777899998888763
No 81
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=52.41 E-value=35 Score=20.36 Aligned_cols=51 Identities=4% Similarity=-0.113 Sum_probs=31.8
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhh
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISS 76 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~ 76 (208)
++||+..- -..+.+.+++.+||+|..++....-|--+|-..+++.+.....
T Consensus 11 ~VgNL~~~-----~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 11 LLKNLTAQ-----IDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp EEECCCTT-----CCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEeCCCcc-----CCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 56666332 2346788999999998887543222334666678766655543
No 82
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=50.71 E-value=38 Score=21.16 Aligned_cols=42 Identities=12% Similarity=-0.088 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+.+.+||.|..+..+.--+--+|-..+++.+++.+..
T Consensus 41 e~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai~~ 82 (114)
T 2cq2_A 41 RNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 82 (114)
T ss_dssp HHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 467889999999988874332112457778899888887754
No 83
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=50.17 E-value=30 Score=20.33 Aligned_cols=43 Identities=2% Similarity=-0.055 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+++.+||+|..+.....-+.-+|-..+++.+...+..
T Consensus 26 t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 26 TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3566889999999988874322223456777899988888754
No 84
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=46.95 E-value=34 Score=18.71 Aligned_cols=43 Identities=16% Similarity=0.038 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhcC
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSKN 78 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~~ 78 (208)
.+.+.+++.+||++..+..+.- -+.-+|-..+++.++..+..+
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 4567888899999877743211 123466778999999988654
No 85
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=45.78 E-value=14 Score=23.55 Aligned_cols=56 Identities=7% Similarity=0.044 Sum_probs=34.9
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc---CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF---AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~---~~~~~v~v~~p~~~~~i~~~ 77 (208)
++||++.-.. ...+.+.+.+++.+||+|..+....- -+.-+|...+++.+...+..
T Consensus 33 fV~nL~~~~~-e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 33 LITNINPEVP-KEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEESCCTTSC-HHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCCC-HHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 5677764321 11233456688999999877743211 13457778898888887754
No 86
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=40.32 E-value=61 Score=19.64 Aligned_cols=53 Identities=11% Similarity=-0.112 Sum_probs=35.5
Q ss_pred ccccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 20 SRTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 20 p~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
=.+||++.-. ..+.+.+++.+||.|..+..+..-+.-+|-..+.+.++.....
T Consensus 24 l~V~NLp~~~-----te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~~ 76 (100)
T 3r27_A 24 VHIRGLIDGV-----VEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNY 76 (100)
T ss_dssp EEEESCCTTC-----CHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC-----CHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 3677776432 3456789999999987774322234567778888888887753
No 87
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=40.08 E-value=49 Score=18.51 Aligned_cols=43 Identities=12% Similarity=0.012 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHcCCceEEecccc----CcccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWF----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~----~~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+.+.+||++..+..+.- -+.-+|-..+++.+...+..
T Consensus 20 t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 20 LKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 34678889999999888743210 12346677899988888764
No 88
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=40.05 E-value=55 Score=19.07 Aligned_cols=52 Identities=8% Similarity=-0.097 Sum_probs=33.9
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||+|..+....--+.-+|-..+++.++..+..
T Consensus 21 ~V~nlp~~-----~t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~ 72 (97)
T 1why_A 21 WVGGLGPN-----TSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAK 72 (97)
T ss_dssp EEECCCSS-----CCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 55666432 23456788899999988774321112456667899988888764
No 89
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=40.03 E-value=60 Score=19.47 Aligned_cols=51 Identities=6% Similarity=-0.134 Sum_probs=35.0
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++||++.- -..+.+.+++.+||+|..+..+.- +.-+|-..+++.++..+..
T Consensus 19 ~V~nLp~~-----~t~~~l~~~F~~~G~i~~~~i~~~-g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 19 VVSGLPPS-----GSWQDLKDHMREAGDVCYADVYRD-GTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEESCCSS-----CCHHHHHHHHGGGSCEEEEEEETT-TEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCEeEEEEecC-CEEEEEECCHHHHHHHHHH
Confidence 56666532 235677889999999877743221 4567778899988888764
No 90
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=39.63 E-value=58 Score=19.68 Aligned_cols=51 Identities=10% Similarity=-0.066 Sum_probs=33.8
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhh
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISS 76 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~ 76 (208)
++||++.- -..+.+.+++.+||.|..+....--+.-+|-..+.+.+...+.
T Consensus 19 ~V~nLp~~-----~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 19 HVRGLCES-----VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp EEESCCSS-----CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 56776532 2345678999999998877432212345677888888888775
No 91
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.89 E-value=62 Score=19.36 Aligned_cols=52 Identities=6% Similarity=-0.098 Sum_probs=33.9
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||+|..+....--+.-+|-..+++.+...+..
T Consensus 29 ~V~nl~~~-----~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 29 YCGGIASG-----LTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEECCSSC-----CCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 45666432 13456788889999987774322223456778899988888754
No 92
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=38.39 E-value=61 Score=19.14 Aligned_cols=50 Identities=14% Similarity=0.058 Sum_probs=34.6
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+ -+.-+|-..+++.++..+..
T Consensus 15 ~V~nl~~~~-----t~~~l~~~F~~~G~i~~v~~~--~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 15 FVRNLANTV-----TEEILEKAFSQFGKLERVKKL--KDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp EEECCCTTC-----CHHHHHHHHHHHSCEEEEEEC--SSCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCEEEEEEE--CCEEEEEeCCHHHHHHHHHH
Confidence 456664332 345678888999998887432 24556778899999888864
No 93
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.15 E-value=68 Score=19.60 Aligned_cols=51 Identities=10% Similarity=-0.113 Sum_probs=34.6
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhh
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISS 76 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~ 76 (208)
.+||++.-. ..+.+.+++.+||.|..+..+.--+.-+|-..+++.+...+.
T Consensus 20 fV~nLp~~v-----te~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 20 HIRKLPIDV-----TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp EECSCCTTS-----CHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 567775432 345678899999998877432212345777889998888775
No 94
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=38.13 E-value=57 Score=18.85 Aligned_cols=49 Identities=8% Similarity=-0.029 Sum_probs=32.3
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHh
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYI 74 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i 74 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+--+|-..+++.++.+
T Consensus 15 ~V~~Lp~~~-----te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 15 FVGRCTEDM-----TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp EEESCCTTC-----CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 456664332 35567889999999888743311 13457778899988854
No 95
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.62 E-value=67 Score=19.33 Aligned_cols=44 Identities=11% Similarity=0.008 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHcCCceEEecc-ccCcccEEEecChhHHHHhhhcC
Q 036716 35 LHEFATRVLQKSRGTLEFKGP-WFAKMDFIITSDPMNVHYISSKN 78 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~-~~~~~~~v~v~~p~~~~~i~~~~ 78 (208)
..+.+.+++.+||.|..+..+ ..-+.-+|-..+++.+...+...
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~~ 74 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNE 74 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHTC
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHhc
Confidence 356788999999998877432 01123467788999888887653
No 96
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=37.45 E-value=62 Score=19.29 Aligned_cols=57 Identities=9% Similarity=-0.009 Sum_probs=35.1
Q ss_pred cccchHHHHHc-ccchHHHHHHHHHHcCCceEEecccc----CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLN-AHQLHEFATRVLQKSRGTLEFKGPWF----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~----~~~~~v~v~~p~~~~~i~~~ 77 (208)
++||++.-... .....+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+..
T Consensus 19 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 19 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 56777632110 00145678899999999888743210 12346777888888887764
No 97
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.30 E-value=67 Score=19.27 Aligned_cols=53 Identities=9% Similarity=0.014 Sum_probs=34.7
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccc-----cCcccEEEecChhHHHHhhhcC
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPW-----FAKMDFIITSDPMNVHYISSKN 78 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~-----~~~~~~v~v~~p~~~~~i~~~~ 78 (208)
.+|+++.- -..+.+.+++.+||+|..+..+. .-+--+|...+++.+..++..+
T Consensus 15 fV~~Lp~~-----~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~ 72 (103)
T 1s79_A 15 YIKGFPTD-----ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 72 (103)
T ss_dssp EEECCCTT-----CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSS
T ss_pred EEECCCCC-----CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcC
Confidence 45666433 23456788889999987774331 1123467788999999988643
No 98
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.10 E-value=35 Score=20.06 Aligned_cols=52 Identities=12% Similarity=-0.074 Sum_probs=33.9
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.--+.-+|-..+++.+...+..
T Consensus 19 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 19 FVGNLPPDI-----TEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp EEESCCTTC-----CHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 566665432 3456788889999987774332223446667888888887744
No 99
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.78 E-value=63 Score=18.54 Aligned_cols=50 Identities=6% Similarity=-0.052 Sum_probs=33.5
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||+|..+... -+.-+|-..+++.+...+..
T Consensus 14 ~V~nLp~~-----~t~~~l~~~F~~~G~v~~v~~~--~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 14 HVGNISPT-----CTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEESCCSS-----CCHHHHHHHHHTTSCCCEEEEC--SSEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEE--CCEEEEEECCHHHHHHHHHH
Confidence 45666432 2355678889999998877422 23456667899988888753
No 100
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.70 E-value=46 Score=20.16 Aligned_cols=52 Identities=6% Similarity=-0.147 Sum_probs=34.7
Q ss_pred cccchHH-HHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLST-LVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~-~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+||++. - -..+.+.+++.+||.|..+..+.--+.-+|-..+++.+...+..
T Consensus 19 ~V~nLp~~~-----~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 71 (102)
T 1x4d_A 19 HIMDFQRGK-----NLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDY 71 (102)
T ss_dssp EEESCCCSS-----SHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCc-----CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 5677754 2 23456788899999988874322113457778899888887753
No 101
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=35.56 E-value=60 Score=19.81 Aligned_cols=51 Identities=6% Similarity=-0.149 Sum_probs=34.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++||++.-. ..+.+.+++.+||+|..+..+.- +.-+|-..+++.++..+..
T Consensus 20 ~V~nLp~~~-----t~~~l~~~F~~~G~v~~~~i~~~-g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 20 VVSGLPPSG-----SWQDLKDHMREAGDVCYADVYRD-GTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp EEEECCSSC-----CTTHHHHHHGGGSCEEEEEECTT-SEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEecC-CEEEEEECCHHHHHHHHHH
Confidence 567665322 24457788899999887743211 4567778899988888764
No 102
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.41 E-value=66 Score=18.36 Aligned_cols=50 Identities=6% Similarity=0.041 Sum_probs=34.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+... -+.-+|-..+++.++..+..
T Consensus 13 ~V~nlp~~~-----t~~~l~~~F~~~G~v~~~~~~--~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 13 FVGNVSAAC-----TSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp EEESCCTTC-----CHHHHHHHHHHHSCEEEEEEC--SSCEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHcCCCEEEEEEE--CCEEEEEECCHHHHHHHHHH
Confidence 456664432 345678888999998887432 33566778899988888764
No 103
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=34.30 E-value=67 Score=18.82 Aligned_cols=52 Identities=12% Similarity=-0.090 Sum_probs=32.6
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||.|..+.....-+.-+|...+++.+...+..
T Consensus 31 ~V~nlp~~-----~~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 82 (101)
T 2la4_A 31 YIGNIPHF-----ATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 82 (101)
T ss_dssp EEESCCTT-----CCHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEcCCCcc-----cCHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 45666432 13456788889999987774321223446667788887777643
No 104
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=33.22 E-value=81 Score=19.01 Aligned_cols=43 Identities=9% Similarity=-0.081 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHcCCceEEeccccC--------cccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWFA--------KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~~--------~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+.+.+||+|..+..+.-. +.-+|-..+++.+......
T Consensus 28 ~~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~ 78 (105)
T 3v4m_A 28 IVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQG 78 (105)
T ss_dssp HHHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHH
Confidence 456778888999999888543211 2235667788877777644
No 105
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.13 E-value=70 Score=18.25 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||+|..+..+ -+.-+|-..+++.+...+..
T Consensus 22 ~~~l~~~F~~~G~i~~v~~~--~g~afV~f~~~~~A~~A~~~ 61 (90)
T 2dnq_A 22 EQEIRSLFEQYGKVLECDII--KNYGFVHIEDKTAAEDAIRN 61 (90)
T ss_dssp HHHHHHHHHTSSCEEEEEEE--TTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEEE--CCEEEEEECCHHHHHHHHHH
Confidence 45678889999998877432 24556778899988888753
No 106
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=32.90 E-value=82 Score=19.37 Aligned_cols=52 Identities=2% Similarity=-0.208 Sum_probs=34.4
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|...+++.+..++..
T Consensus 26 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 83 (126)
T 3ex7_B 26 FVTGVHEEA-----TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 83 (126)
T ss_dssp EEESCCTTC-----CHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 566665322 34567888899999887743211 12346778899999888853
No 107
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=32.88 E-value=67 Score=18.70 Aligned_cols=50 Identities=14% Similarity=0.040 Sum_probs=34.7
Q ss_pred cccchHH-HHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLST-LVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~-~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++. - -..+.+.+++.+||+|..+..+ -+.-+|-..+++.+...+..
T Consensus 14 ~V~nlp~~~-----~t~~~l~~~F~~~G~v~~v~i~--~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 14 FIGNLPLKN-----VSKEDLFRIFSPYGHIMQINIK--NAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEESSTTSC-----CCHHHHHHHHTTTCCCCEEEEE--TTEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCccc-----CCHHHHHHHHHhcCCEEEEEEe--CCEEEEEECCHHHHHHHHHH
Confidence 4566653 2 2345678889999998887432 24557778899999888864
No 108
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=32.61 E-value=1.2e+02 Score=20.91 Aligned_cols=57 Identities=11% Similarity=0.120 Sum_probs=31.3
Q ss_pred ChhHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhHHHHHhhhhccC-CcccHHHHHHHH
Q 036716 104 GNLWKMQRKMIHSVMKHNKFESALEKTIYQKLENGLIPVLDHASEVG-IKVDLQDVFQRF 162 (208)
Q Consensus 104 g~~w~~~Rk~l~~~f~~~~l~~~~~~~~~~~v~~~~~~~l~~~~~~~-~~vd~~~~~~~~ 162 (208)
-..|.+++..++..|++..+..-+...+.+ ++.-.+.+.+.-.++ ..+|+.+.+.++
T Consensus 110 ~~k~q~~~~~ls~~~sp~~L~~~L~~a~~e--~eeeS~~l~~~F~~~~~e~dv~~Fl~~y 167 (192)
T 2p22_C 110 VASWQDYHSEFSKKYGDIALKKKLEQNTKK--LDEESSQLETTTRSIDSADDLDQFIKNY 167 (192)
T ss_dssp HHHHHHHHHHHHHTSSHHHHHHHHHHHHHH--HHHHHHHHHHSCSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHH--HHHHHHHHHHHHcCCcccchHHHHHHHH
Confidence 345555556777788888877755444433 244444444333222 246666666554
No 109
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=31.96 E-value=49 Score=20.59 Aligned_cols=43 Identities=2% Similarity=-0.055 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+++.+||+|..+.....-+.-+|...+++.+...+..
T Consensus 50 te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 50 TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp CHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3567888999999987773322223456777888888887744
No 110
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.33 E-value=58 Score=19.59 Aligned_cols=51 Identities=8% Similarity=-0.147 Sum_probs=34.0
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhh
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISS 76 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~ 76 (208)
.+||++.-. ..+.+.+++.+||.|..+....--+.-+|-..+++.+...+.
T Consensus 19 ~V~nLp~~~-----te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 19 HIRKLPGEV-----TETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp EEESCCTTC-----CHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 567776321 345678889999998777432212345777889888887775
No 111
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=30.89 E-value=83 Score=18.39 Aligned_cols=42 Identities=10% Similarity=-0.057 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||++..+..+.- -+.-+|-..+++.+...+..
T Consensus 14 ~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 14 KGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp HHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 4567888899999877743221 23456677899988888763
No 112
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.84 E-value=73 Score=19.96 Aligned_cols=51 Identities=10% Similarity=-0.113 Sum_probs=34.1
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhh
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISS 76 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~ 76 (208)
++||++.-. ..+.+.+++.+||.|..+..+.--+.-+|-..+++.+...+.
T Consensus 35 fVgNLp~~v-----te~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 35 HIRKLPIDV-----TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEESCCTTC-----CHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 667775432 345678999999998777432212345677788888887775
No 113
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=30.76 E-value=69 Score=17.41 Aligned_cols=43 Identities=7% Similarity=-0.071 Sum_probs=28.9
Q ss_pred HHHHHHHHHHcCCceEEeccccC------cccEEEecChhHHHHhhhcC
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFA------KMDFIITSDPMNVHYISSKN 78 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~------~~~~v~v~~p~~~~~i~~~~ 78 (208)
.+.+.+.+.+||++..+..+.-. +.-+|-..+++.++.++.-+
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 61 (75)
T 2mss_A 13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIH 61 (75)
T ss_dssp HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSS
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCC
Confidence 45678888999998777332110 12456678999998887543
No 114
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=30.07 E-value=87 Score=18.41 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHcCCceEEecccc---C---cccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWF---A---KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~---~---~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+++.+||+|..+..+.- + +--+|...+++.++..+..
T Consensus 25 ~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 73 (100)
T 3ns6_A 25 LKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKS 73 (100)
T ss_dssp HHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35667888999999888743211 1 2346778899888888753
No 115
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=30.00 E-value=76 Score=17.69 Aligned_cols=42 Identities=5% Similarity=-0.045 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||++..+..+.- -+.-+|-..+++.++..+..
T Consensus 21 ~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 68 (85)
T 3mdf_A 21 DKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 68 (85)
T ss_dssp HHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHH
Confidence 4567888899999887743210 11246677899988888743
No 116
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=29.93 E-value=87 Score=18.33 Aligned_cols=51 Identities=14% Similarity=0.066 Sum_probs=34.4
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- .-..+.+.+++.+||.|..+... -+.-+|-..+++.+...+..
T Consensus 26 ~V~nLp~~----~~t~~~L~~~F~~~G~v~~v~i~--~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 26 FIGNLPLK----NVSKEDLFRIFSPYGHIMQINIK--NAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEESCCSS----CCCHHHHHHHHGGGSCEEEEEEC--SSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCcc----cCCHHHHHHHHHhcCCEEEEEEe--CCEEEEEECCHHHHHHHHHH
Confidence 56666530 12345678889999998887432 24456778899988888764
No 117
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=29.91 E-value=83 Score=18.12 Aligned_cols=56 Identities=9% Similarity=0.074 Sum_probs=34.1
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccc---cCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPW---FAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-.. ...+...+.+.+.+||++..+..+. .-+.-+|-..+++.+...+..
T Consensus 12 ~V~nLp~~~~-~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 12 YINNLNEKIK-KDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEESCCTTSC-HHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCCC-HHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 5666654321 1123334458899999988773221 013457778899988888754
No 118
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.77 E-value=83 Score=18.46 Aligned_cols=52 Identities=13% Similarity=0.065 Sum_probs=34.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+..
T Consensus 17 ~V~nLp~~~-----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2dnm_A 17 KVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74 (103)
T ss_dssp EEESCCTTC-----CHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHH
Confidence 566665432 34567888999999887743211 12346778899988888864
No 119
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.43 E-value=63 Score=18.91 Aligned_cols=52 Identities=6% Similarity=-0.078 Sum_probs=33.3
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccC-----cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFA-----KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~-----~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.-- +.-+|-..+++.++..+..
T Consensus 21 ~v~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 21 FISGLPFSC-----TKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp EEESCCTTC-----CHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 456664332 345678888999998776322110 2346677899998888754
No 120
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.93 E-value=89 Score=18.14 Aligned_cols=56 Identities=2% Similarity=-0.048 Sum_probs=33.5
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc---CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF---AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~---~~~~~v~v~~p~~~~~i~~~ 77 (208)
++||++.-.. ...+.+.+.+++.+||+|..+..+.- -+.-+|-..+++.++..+..
T Consensus 13 ~V~nL~~~~~-~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 13 QVSNIDYRLS-RKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEESCCTTSC-HHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEECCCCCCC-HHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 4666654321 12233344589999999887743211 12346777899888887753
No 121
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=28.61 E-value=80 Score=17.49 Aligned_cols=42 Identities=10% Similarity=0.056 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+.+.+||++..+..+.- -+.-+|-..+++.++..+..
T Consensus 15 ~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 15 DETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp HHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 4567788899999877633211 11246778899988888764
No 122
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.48 E-value=83 Score=18.45 Aligned_cols=52 Identities=6% Similarity=0.024 Sum_probs=33.4
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc----CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~----~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|...+++.+...+..
T Consensus 19 ~V~nlp~~~-----t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 19 HVSNIPFRF-----RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEESCCTTC-----CHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 556664332 34567888899999877743211 12346667899988888754
No 123
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=27.97 E-value=60 Score=19.82 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=28.1
Q ss_pred HHHHHHHHHHcCCceEEeccccCccc-EEEecChhHHHHhhh
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFAKMD-FIITSDPMNVHYISS 76 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~~~~-~v~v~~p~~~~~i~~ 76 (208)
...+.+++..||.+ .|. |+-... .+++.+|+.+++++.
T Consensus 29 t~DI~~lFs~fggv-~I~--WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 29 TSDLYQLFSAFGNI-QIS--WIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp HHHHHHHHTTTCSC-CCE--EEETTEEEEECSCHHHHHHHHH
T ss_pred hHHHHHHhhccCCE-EEE--EEcCCeEEEEecCHHHHHHHHH
Confidence 34677888999965 333 776654 556789999999987
No 124
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.93 E-value=93 Score=18.03 Aligned_cols=42 Identities=12% Similarity=0.044 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCceEEeccccC------cccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFA------KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~------~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||+|..+..+.-- +.-+|-..+++.++..+..
T Consensus 22 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 22 EEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp HHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 45678888999998877432110 2246778899988888843
No 125
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=27.45 E-value=99 Score=19.08 Aligned_cols=43 Identities=5% Similarity=-0.066 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHcCCceEEeccccC--cccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWFA--KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~~--~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+.+.+||.|..+..+.-. |.-+|-..+++.+......
T Consensus 30 l~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~ 74 (114)
T 3s6e_A 30 IKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 74 (114)
T ss_dssp HHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHH
Confidence 456677888899998887433221 2345556788877776644
No 126
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=27.28 E-value=93 Score=17.82 Aligned_cols=42 Identities=12% Similarity=0.084 Sum_probs=28.5
Q ss_pred HHHHHHHHHHcCCceEEecccc-----CcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF-----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~-----~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||+|..+..+.- -+.-+|-..+++.++..+..
T Consensus 30 ~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (95)
T 2ywk_A 30 EEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIAL 76 (95)
T ss_dssp HHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHH
Confidence 4567888999999877733211 01246667899988888763
No 127
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=27.04 E-value=1e+02 Score=18.76 Aligned_cols=52 Identities=13% Similarity=0.004 Sum_probs=33.4
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccC-----cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFA-----KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~-----~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.-- +.-+|-..+++.++..+..
T Consensus 11 ~V~nLp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 11 FIGGLNRET-----NEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEECCTTTC-----CHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 356664321 345678889999998776432111 2346677899999888864
No 128
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.01 E-value=1e+02 Score=18.15 Aligned_cols=52 Identities=6% Similarity=-0.077 Sum_probs=33.9
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc-------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF-------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~-------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+..
T Consensus 19 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 77 (107)
T 2cph_A 19 LVRNIPFQA-----NQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNA 77 (107)
T ss_dssp EEESCCTTC-----CHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCcC-----CHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHH
Confidence 566665432 34567888999999887743211 11246667899988888754
No 129
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=26.91 E-value=89 Score=17.77 Aligned_cols=52 Identities=8% Similarity=-0.121 Sum_probs=33.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc----CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~----~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||++..+....- -+.-+|-..+++.++..+..
T Consensus 12 ~V~nlp~~-----~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 12 FVRNLPFD-----FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EECSCCTT-----CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 45666532 235567888899999877643210 12346667899988888764
No 130
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.89 E-value=90 Score=18.22 Aligned_cols=52 Identities=12% Similarity=-0.125 Sum_probs=32.9
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+..
T Consensus 16 ~v~nLp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 1x5s_A 16 FVGGLSFD-----TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73 (102)
T ss_dssp EEESCCTT-----CCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHH
T ss_pred EEECCCCC-----CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 45666432 234567888899999877743211 01235667899988888744
No 131
>1x4a_A Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)...; structure genomics, SURP domain, splicing factor SF2; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.71 E-value=1.1e+02 Score=18.25 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=33.7
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccC---cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFA---KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~---~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+....-. +.-+|...+++.++..+..
T Consensus 26 ~V~nLp~~~-----t~~~l~~~F~~~G~v~~~~i~~~~~~~g~afV~f~~~~~A~~A~~~ 80 (109)
T 1x4a_A 26 YVGNLPPDI-----RTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYG 80 (109)
T ss_dssp EEESCCTTC-----CHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEECCHHHHHHHHHH
Confidence 566665432 345678899999998776432111 1346778899988888743
No 132
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=26.52 E-value=89 Score=18.96 Aligned_cols=52 Identities=10% Similarity=-0.058 Sum_probs=34.0
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccC----cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFA----KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~----~~~~v~v~~p~~~~~i~~~ 77 (208)
++||++.-. ..+.+.+++.+||+|..+..+.-- +.-+|-..+++.++..+..
T Consensus 9 fV~nLp~~~-----te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 9 FIKNLDKSI-----DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEESCCTTC-----CHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCCCC-----CHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 556664332 345778899999998776322111 1247778899999888754
No 133
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.31 E-value=1e+02 Score=18.02 Aligned_cols=51 Identities=10% Similarity=-0.108 Sum_probs=32.8
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc----CcccEEEecChhHHHHhhh
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF----AKMDFIITSDPMNVHYISS 76 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~----~~~~~v~v~~p~~~~~i~~ 76 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+.
T Consensus 19 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 19 YVGNLSRDV-----TEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEESCCTTC-----CHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEeCCCccC-----CHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 556665322 34567888899999877643211 0234666789998888875
No 134
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.97 E-value=98 Score=17.87 Aligned_cols=52 Identities=12% Similarity=0.004 Sum_probs=33.3
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc----C-----cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF----A-----KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~----~-----~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- + +.-+|-..+++.+...+..
T Consensus 9 ~V~nLp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 9 FIKNLNFST-----TEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEESCCTTC-----CHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 456664332 34567888899999877633210 1 2346667899999988864
No 135
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=25.89 E-value=1e+02 Score=18.15 Aligned_cols=52 Identities=2% Similarity=-0.203 Sum_probs=33.4
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc---C---cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF---A---KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~---~---~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- + +.-+|-..+++.+...+..
T Consensus 27 ~V~nlp~~~-----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 27 FVTGVHEEA-----TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEECCCTTC-----CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 466665432 34567888999999877732211 1 2245667899988888764
No 136
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=25.88 E-value=1e+02 Score=17.78 Aligned_cols=42 Identities=12% Similarity=-0.005 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||++..+..+.- -+.-+|-..+++.+...+..
T Consensus 16 ~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 16 EEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp HHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4567888899999888743211 12346677899988888753
No 137
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.78 E-value=95 Score=17.74 Aligned_cols=42 Identities=7% Similarity=0.009 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCceEEecccc---C---cccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF---A---KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~---~---~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++++||++..+..+.- + +.-+|-..+++.+...+..
T Consensus 29 ~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 29 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp HHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 4567888999999877733211 1 1235667899988888764
No 138
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=25.77 E-value=1.1e+02 Score=18.16 Aligned_cols=52 Identities=0% Similarity=-0.201 Sum_probs=34.0
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+..
T Consensus 30 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 30 FVTSIHEEA-----QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEESCCTTC-----CHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 567665432 34567888999999887743211 02346677899988888763
No 139
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.62 E-value=49 Score=20.51 Aligned_cols=52 Identities=6% Similarity=-0.063 Sum_probs=33.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhh
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISS 76 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~ 76 (208)
.+||++.- .-..+.+.+++.+||.|..+.....-+.-+|-..+++.+...+.
T Consensus 29 ~V~NLp~~----~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 29 HLSNLPHS----GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp EEESCCCS----SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred EEeCCCCc----cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 56666532 01245678889999998887322212345777788888877775
No 140
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=25.24 E-value=97 Score=18.61 Aligned_cols=50 Identities=10% Similarity=-0.043 Sum_probs=34.3
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+... -+.-+|-..+++.+...+..
T Consensus 35 ~V~nLp~~~-----t~~~L~~~F~~~G~i~~v~i~--kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 35 FVRPFPLDV-----QESELNEIFGPFGPMKEVKIL--NGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp EECSSCTTC-----CHHHHHHHHTTTSCCCEEEEE--TTEEEEECSSHHHHHHHHHH
T ss_pred EEECCCCCC-----CHHHHHHHHHhcCCEEEEEEE--CCEEEEEECCHHHHHHHHHH
Confidence 566664332 345678889999998777432 34557777899988888754
No 141
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.91 E-value=1.2e+02 Score=18.16 Aligned_cols=42 Identities=7% Similarity=0.026 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhcC
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSKN 78 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~~ 78 (208)
+...+.+.+.+||.+..+. ....+-+|...|.+.+..++.-+
T Consensus 28 l~~~L~~~F~~~G~Vi~vr--~~~d~~fVtF~d~~sAlaAi~mn 69 (91)
T 2dnr_A 28 LIDELLQQFASFGEVILIR--FVEDKMWVTFLEGSSALNVLSLN 69 (91)
T ss_dssp HHHHHHHHHHTTCCEEEEE--ECSSSEEEEESSHHHHHHGGGGT
T ss_pred HHHHHHHHHHhCCCeEEEE--EecCCEEEEECChHHHHHHHhcC
Confidence 4456677788999987774 23456677788988887777544
No 142
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=24.43 E-value=1e+02 Score=17.25 Aligned_cols=42 Identities=5% Similarity=0.038 Sum_probs=29.0
Q ss_pred HHHHHHHHHHcCCceEEeccc-------cCcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPW-------FAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~-------~~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||++..+..+. .-+.-+|-..+++.+...+..
T Consensus 18 ~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 18 KDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp HHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 456778889999987774321 112346678899999888864
No 143
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.38 E-value=1.1e+02 Score=17.86 Aligned_cols=52 Identities=10% Similarity=-0.001 Sum_probs=34.5
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccC------cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFA------KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~------~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.-- +.-+|-..+++.++..+..
T Consensus 19 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 19 YVGGLDEKV-----SEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp EEECCCTTC-----CHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 566664432 345678889999998877432110 1346778899999988864
No 144
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.35 E-value=1.2e+02 Score=18.15 Aligned_cols=40 Identities=3% Similarity=-0.129 Sum_probs=27.2
Q ss_pred HHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhh
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYIS 75 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~ 75 (208)
.+.+.+++.+||.|..+..+.- -+.-+|-..+++.++..+
T Consensus 39 ~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 84 (114)
T 2cq4_A 39 PRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 84 (114)
T ss_dssp HHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH
T ss_pred HHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHH
Confidence 4567888899999887743210 123466778888888877
No 145
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=24.26 E-value=1.1e+02 Score=18.00 Aligned_cols=52 Identities=8% Similarity=-0.079 Sum_probs=33.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc--Cc----ccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF--AK----MDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~--~~----~~~v~v~~p~~~~~i~~~ 77 (208)
++||++.-. ..+.+.+++.+||+|..+..+.- .+ .-+|-..+++.+...+..
T Consensus 23 fV~nLp~~~-----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 23 IVNYLPQNM-----TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEESCCTTC-----CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 566665432 34567888999999877743210 01 135777899988887754
No 146
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=23.93 E-value=93 Score=24.53 Aligned_cols=52 Identities=8% Similarity=-0.061 Sum_probs=34.1
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
+||||+.-. ..+.+.+++.+||.|..+..+.- -+.-+|.+.+++.+..++..
T Consensus 106 fV~nL~~~~-----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 106 FVARVNYDT-----TESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEeCCCCCC-----CHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 566664332 34567888899999887743210 12346778899988888754
No 147
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=23.65 E-value=1.2e+02 Score=20.38 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=33.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc--CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF--AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~--~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+||+..- -..+.+.+.+.+||.|.++....- .+.-+|-..|++.+.+....
T Consensus 50 ~VgNL~~~-----vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFYP-----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCSC-----CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCCC-----CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 35776421 234568899999999888733111 12356777898888777754
No 148
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=23.64 E-value=97 Score=18.20 Aligned_cols=52 Identities=15% Similarity=-0.071 Sum_probs=33.4
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc-----CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF-----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~-----~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||.|..+..+.- -+.-+|-..+++.+...+..
T Consensus 19 ~v~nLp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 19 FVGMLNKQQ-----SEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEESCCTTC-----CHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 466664332 34567888999999877743211 12346667899988888753
No 149
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=23.42 E-value=92 Score=18.87 Aligned_cols=52 Identities=8% Similarity=-0.033 Sum_probs=33.8
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc---C---cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF---A---KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~---~---~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||+|..+..+.- + +--+|...+++.++..+..
T Consensus 10 fV~nL~~~-----~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 10 TFARLNDN-----VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEESCCTT-----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCC-----CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 45666432 235567889999999887743211 1 1236778899998888754
No 150
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=23.23 E-value=1e+02 Score=19.70 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=32.9
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc--CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF--AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~--~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+||+..- -..+.+.+++.+||.|..+..+.- +..-+|-..+++.++..+..
T Consensus 32 ~V~NL~~~-----vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 32 IVENLFYP-----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEESCCSC-----CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCCC-----CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 36666421 235568899999999887743211 11256778888877777644
No 151
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=22.92 E-value=1.2e+02 Score=18.13 Aligned_cols=40 Identities=8% Similarity=-0.041 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCceEEeccccCcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||+|..+... -+.-+|-..+++.++..+..
T Consensus 42 ~~~l~~~F~~~G~v~~v~i~--~g~afV~f~~~~~A~~A~~~ 81 (110)
T 1wf1_A 42 KSDVETIFSKYGRVAGCSVH--KGYAFVQYSNERHARAAVLG 81 (110)
T ss_dssp HHHHHHHHGGGSCCSEEEEE--TTEEEEECSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEe--CCEEEEEECCHHHHHHHHHH
Confidence 55678889999998877321 23446667888888888744
No 152
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=22.86 E-value=1.1e+02 Score=17.08 Aligned_cols=42 Identities=2% Similarity=-0.123 Sum_probs=28.5
Q ss_pred HHHHHHHHHHcCCceEEecccc--C----cccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF--A----KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~--~----~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||++..+..+.- . +.-+|-..+++.++..+..
T Consensus 20 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 20 TAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp HHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4567888899999877643211 0 1235667899988888764
No 153
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=22.69 E-value=1.1e+02 Score=17.11 Aligned_cols=53 Identities=13% Similarity=0.009 Sum_probs=33.6
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc---C---cccEEEecChhHHHHhhhcC
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF---A---KMDFIITSDPMNVHYISSKN 78 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~---~---~~~~v~v~~p~~~~~i~~~~ 78 (208)
.+|+++.-. ..+.+.+++.+||++..+..+.- + +.-+|-..+++.++..+...
T Consensus 15 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 15 FVGGLSWDT-----SKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEECCCTTC-----CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEeCCCCCC-----CHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 456664322 35567888899999877643211 1 12466678999888888553
No 154
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=22.45 E-value=1.3e+02 Score=18.02 Aligned_cols=52 Identities=8% Similarity=-0.114 Sum_probs=33.5
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccC------cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFA------KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~------~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||.|..+..+.-- +.-+|-..+++.++..+..
T Consensus 19 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 19 FVGDLSPEI-----TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp EEESCCTTC-----CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456664332 345678889999998777432110 1236677899999888854
No 155
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.26 E-value=1.4e+02 Score=17.97 Aligned_cols=53 Identities=8% Similarity=-0.127 Sum_probs=34.4
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhcC
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSKN 78 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~~ 78 (208)
++|+++.- -..+.+.+++.+||+|..+..+.- -+.-+|-..+++.++..+...
T Consensus 21 ~V~nlp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 79 (116)
T 2cqd_A 21 FVGGLPYH-----TTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 79 (116)
T ss_dssp EEECCCSS-----CCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCS
T ss_pred EEeCCCCC-----CCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhC
Confidence 45666432 235567888899999877743211 012467788999999888654
No 156
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.24 E-value=1.3e+02 Score=17.77 Aligned_cols=52 Identities=15% Similarity=-0.089 Sum_probs=34.0
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+..
T Consensus 19 ~V~nLp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 19 FIRNLSFDS-----EEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp EEESCCTTC-----CHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCCC-----CHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 566665432 34567888899999887743211 12246677899998888864
No 157
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=21.98 E-value=1.2e+02 Score=17.84 Aligned_cols=52 Identities=4% Similarity=-0.204 Sum_probs=32.9
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc-----CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF-----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~-----~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+||++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.++..+..
T Consensus 33 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 33 LVSNLDFGV-----SDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEESCCTTC-----CHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 566664332 34567888899999877632211 11246667899988888764
No 158
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.98 E-value=99 Score=18.64 Aligned_cols=43 Identities=12% Similarity=-0.088 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHcCCceEEeccc--cCcccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPW--FAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~--~~~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+.+.+||+|..+..+- .-+.-+|...+++.+...+..
T Consensus 39 ~e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~ 83 (112)
T 2dit_A 39 IREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQT 83 (112)
T ss_dssp HHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHH
Confidence 3467788899999987773210 012345666788888777744
No 159
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.90 E-value=91 Score=17.62 Aligned_cols=40 Identities=8% Similarity=0.073 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcCCceEEecccc-CcccEEEecChhHHHHhh
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF-AKMDFIITSDPMNVHYIS 75 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~-~~~~~v~v~~p~~~~~i~ 75 (208)
.+.+.+++.+||+|..+..+.- -+.-+|-..+++.++.+.
T Consensus 19 e~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~~ 59 (88)
T 1wf0_A 19 EDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLC 59 (88)
T ss_dssp HHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTT
T ss_pred HHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHHh
Confidence 4567888899999888743211 134577788999887653
No 160
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.59 E-value=86 Score=18.32 Aligned_cols=52 Identities=6% Similarity=-0.097 Sum_probs=32.6
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+..
T Consensus 16 ~V~nLp~~-----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 16 YVGGLAEE-----VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp EEESCCSS-----CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 45666432 235567888899999877733211 11235667788888888753
No 161
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.50 E-value=87 Score=18.80 Aligned_cols=52 Identities=6% Similarity=0.024 Sum_probs=32.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc----CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~----~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+|+++.-. ..+.+.+++.+||+|..+....- -+.-+|-..+++.++..+..
T Consensus 33 ~V~nLp~~~-----te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 33 HVSNIPFRF-----RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp EEESCCTTC-----CHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred EEECCCCcC-----CHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 556664332 34567888899999877632211 12345667788888887753
No 162
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.46 E-value=1.4e+02 Score=17.66 Aligned_cols=52 Identities=10% Similarity=-0.041 Sum_probs=33.7
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCC-ceEEecc-------ccCcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRG-TLEFKGP-------WFAKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~-i~~~~~~-------~~~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||+ +..+..+ ..-+.-+|-..+++.+...+..
T Consensus 12 ~V~nLp~~-----~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 12 FIGGIPKM-----KKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEECCCTT-----SCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCc-----CCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 45666432 134567888899998 8777432 0112346778899999888864
No 163
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.46 E-value=1.2e+02 Score=17.28 Aligned_cols=52 Identities=12% Similarity=-0.023 Sum_probs=33.6
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++++||+|..+..+.- -+.-+|-..+++.++..+..
T Consensus 20 ~V~nlp~~-----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 20 YVSNLPFS-----LTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp EEESCCTT-----SCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred EEECCCCC-----CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 56666532 234567888899999877743211 01346778899988888753
No 164
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=21.22 E-value=1.4e+02 Score=17.80 Aligned_cols=42 Identities=7% Similarity=-0.154 Sum_probs=26.4
Q ss_pred HHHHHHHH-HHcCCceEEecccc-----CcccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVL-QKSRGTLEFKGPWF-----AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~-~~yG~i~~~~~~~~-----~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+.+ .+||+|..+..+.- -|.-+|-..+++.+......
T Consensus 40 ~edl~~~f~~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~ 87 (104)
T 1jmt_A 40 FEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVID 87 (104)
T ss_dssp HHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHH
Confidence 34556667 99999888744321 12235556788877777643
No 165
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=21.17 E-value=1e+02 Score=18.49 Aligned_cols=52 Identities=8% Similarity=-0.081 Sum_probs=32.8
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEeccccC------cccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWFA------KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~------~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.- -..+.+.+++.+||+|..+..+.-- +.-+|-..+++.++..+..
T Consensus 29 ~V~nLp~~-----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 29 FIYHLPQE-----FGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp EEESCCSS-----CCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 45666432 2346678889999998776322110 1235667899988888754
No 166
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=21.06 E-value=1.5e+02 Score=17.84 Aligned_cols=43 Identities=9% Similarity=-0.225 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHcCCceEEecccc-------CcccEEEecChhHHHHhhhc
Q 036716 35 LHEFATRVLQKSRGTLEFKGPWF-------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 35 ~~~~~~~~~~~yG~i~~~~~~~~-------~~~~~v~v~~p~~~~~i~~~ 77 (208)
..+.+.+.+.+||.|..+..+.- -+.-+|-..+++.+......
T Consensus 26 ~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~ 75 (105)
T 2pe8_A 26 LEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVD 75 (105)
T ss_dssp CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHH
Confidence 45677888899999888744321 11235556788877776644
No 167
>2e5i_A Heterogeneous nuclear ribonucleoprotein L-like; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.80 E-value=1.7e+02 Score=18.41 Aligned_cols=42 Identities=2% Similarity=-0.190 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCceEEeccccCc-ccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFAK-MDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~~-~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||.|..+....--+ .-+|-..+++.+......
T Consensus 39 ~~~L~~~Fs~yG~V~~v~i~~~~Gf~aFVef~~~~~A~~A~~~ 81 (124)
T 2e5i_A 39 VDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKAA 81 (124)
T ss_dssp HHHHHHHHTTTSCEEEEEEEESSSEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 457889999999987763321112 356777888877666643
No 168
>1fxl_A Paraneoplastic encephalomyelitis antigen HUD; protein-RNA complex, AU-rich element, transcription/RNA complex; 1.80A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1g2e_A 1fnx_H 1d8z_A 1d9a_A 3hi9_A
Probab=20.41 E-value=1.7e+02 Score=18.54 Aligned_cols=42 Identities=12% Similarity=-0.027 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcCCceEEeccccC------cccEEEecChhHHHHhhhc
Q 036716 36 HEFATRVLQKSRGTLEFKGPWFA------KMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~~------~~~~v~v~~p~~~~~i~~~ 77 (208)
.+.+.+++.+||++..+....-. +.-+|-..+++.++..+..
T Consensus 16 ~~~l~~~f~~~G~i~~v~~~~~~~~~~~~g~afV~f~~~~~A~~a~~~ 63 (167)
T 1fxl_A 16 QEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 63 (167)
T ss_dssp HHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEEeCCCCCcceeEEEEEECCHHHHHHHHHH
Confidence 45677888999998776332111 2346778899999998863
No 169
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=20.40 E-value=1.4e+02 Score=17.45 Aligned_cols=52 Identities=6% Similarity=-0.105 Sum_probs=33.5
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+..
T Consensus 17 ~V~nlp~~~-----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (106)
T 2dgp_A 17 FIGQIPRNL-----DEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 74 (106)
T ss_dssp EEESCCTTC-----CHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456665322 34567888999999887743210 12346677899988888753
No 170
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=20.22 E-value=1.7e+02 Score=18.17 Aligned_cols=52 Identities=8% Similarity=-0.066 Sum_probs=33.5
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
.+|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.++..+..
T Consensus 67 ~v~nlp~~~-----~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 67 YVGGLAEEV-----DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp EEECCCTTC-----CHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC-----CHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 456664332 34567888999999888743211 12246777899988888753
No 171
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=20.13 E-value=1.7e+02 Score=18.23 Aligned_cols=52 Identities=10% Similarity=-0.019 Sum_probs=34.2
Q ss_pred cccchHHHHHcccchHHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhhhc
Q 036716 21 RTRMLSTLVLNAHQLHEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYISSK 77 (208)
Q Consensus 21 ~~G~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~~~ 77 (208)
++|+++.-. ..+.+.+++.+||+|..+..+.- -+.-+|-..+++.++.++..
T Consensus 50 ~V~nLp~~~-----te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 50 GVFGLSLYT-----TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CEETCTTSC-----CHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 567665432 34567888999999887743211 12346677899998888864
No 172
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=20.07 E-value=1.4e+02 Score=18.23 Aligned_cols=40 Identities=5% Similarity=-0.135 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcCCceEEecccc------CcccEEEecChhHHHHhh
Q 036716 36 HEFATRVLQKSRGTLEFKGPWF------AKMDFIITSDPMNVHYIS 75 (208)
Q Consensus 36 ~~~~~~~~~~yG~i~~~~~~~~------~~~~~v~v~~p~~~~~i~ 75 (208)
.+.+.+++.+||+|..+..+.- -+.-+|-..+++.+...+
T Consensus 50 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 95 (124)
T 2jwn_A 50 AQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAV 95 (124)
T ss_dssp HHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHH
Confidence 5567888999999877632210 112466788999988888
Done!