Query 036721
Match_columns 223
No_of_seqs 170 out of 1527
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 04:50:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036721.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036721hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 1.6E-53 3.6E-58 350.8 20.4 218 1-219 14-236 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 1.7E-50 3.6E-55 344.2 20.8 214 1-214 57-278 (296)
3 PLN00182 putative aquaporin NI 100.0 3.8E-49 8.3E-54 334.0 21.2 209 1-209 45-254 (283)
4 PLN00026 aquaporin NIP; Provi 100.0 3.7E-49 8E-54 335.4 19.3 212 1-213 74-286 (298)
5 PRK05420 aquaporin Z; Provisio 100.0 1.5E-47 3.3E-52 317.2 21.7 210 1-211 5-230 (231)
6 COG0580 GlpF Glycerol uptake f 100.0 5E-48 1.1E-52 317.5 18.6 209 1-209 8-240 (241)
7 PLN00166 aquaporin TIP2; Provi 100.0 1.7E-46 3.8E-51 313.8 21.4 211 1-211 21-239 (250)
8 PLN00027 aquaporin TIP; Provis 100.0 1.7E-46 3.6E-51 314.7 20.4 212 1-212 23-242 (252)
9 PTZ00016 aquaglyceroporin; Pro 100.0 2.9E-46 6.2E-51 318.9 21.2 211 1-211 53-292 (294)
10 PLN00167 aquaporin TIP5; Provi 100.0 5.3E-46 1.1E-50 311.7 22.2 214 1-214 25-245 (256)
11 PF00230 MIP: Major intrinsic 100.0 1.8E-46 3.9E-51 311.0 15.2 204 1-204 11-227 (227)
12 PLN00183 putative aquaporin NI 100.0 1.2E-45 2.6E-50 311.6 20.3 213 1-214 48-261 (274)
13 KOG0224 Aquaporin (major intri 100.0 2.1E-46 4.6E-51 311.1 12.2 212 1-213 35-279 (316)
14 cd00333 MIP Major intrinsic pr 100.0 7.4E-44 1.6E-48 295.6 19.2 207 1-207 3-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 4.8E-42 1E-46 282.6 18.9 202 3-204 1-216 (216)
16 PLN00184 aquaporin NIP1; Provi 99.7 3.3E-17 7.2E-22 140.0 7.0 99 112-210 52-156 (296)
17 PLN00026 aquaporin NIP; Provi 99.7 3.5E-17 7.6E-22 139.7 6.5 99 112-210 69-173 (298)
18 PLN00183 putative aquaporin NI 99.7 1E-16 2.3E-21 135.7 6.4 107 104-210 32-147 (274)
19 PLN00167 aquaporin TIP5; Provi 99.6 1E-15 2.3E-20 128.6 7.7 99 112-210 20-129 (256)
20 PLN00166 aquaporin TIP2; Provi 99.6 1E-15 2.3E-20 128.3 6.5 100 111-210 15-125 (250)
21 cd00333 MIP Major intrinsic pr 99.6 8.7E-16 1.9E-20 127.4 5.3 97 115-211 1-104 (228)
22 PLN00182 putative aquaporin NI 99.6 1E-15 2.2E-20 130.1 5.7 98 112-209 40-143 (283)
23 KOG0224 Aquaporin (major intri 99.6 1.5E-15 3.3E-20 127.1 5.5 100 112-211 30-136 (316)
24 PRK05420 aquaporin Z; Provisio 99.6 2.5E-15 5.5E-20 124.7 6.7 97 114-210 2-105 (231)
25 PTZ00016 aquaglyceroporin; Pro 99.6 2.6E-15 5.6E-20 128.6 5.9 99 112-210 48-152 (294)
26 PLN00027 aquaporin TIP; Provis 99.6 8.4E-15 1.8E-19 123.1 7.6 98 112-209 18-126 (252)
27 COG0580 GlpF Glycerol uptake f 99.5 1.4E-14 2.9E-19 119.8 5.7 103 113-215 4-115 (241)
28 TIGR00861 MIP MIP family chann 99.5 3.6E-14 7.7E-19 116.9 5.5 93 119-211 1-104 (216)
29 KOG0223 Aquaporin (major intri 99.5 1E-13 2.2E-18 114.8 6.2 100 112-211 9-114 (238)
30 PF00230 MIP: Major intrinsic 99.4 2.8E-13 6.1E-18 112.2 2.9 100 112-211 6-117 (227)
31 COG2116 FocA Formate/nitrite f 92.9 0.86 1.9E-05 38.6 8.8 102 30-134 64-179 (265)
32 PRK11562 nitrite transporter N 80.9 29 0.00063 29.6 10.7 98 34-134 62-171 (268)
33 PRK10805 formate transporter; 78.3 22 0.00047 30.6 9.2 97 34-134 72-182 (285)
34 PF03033 Glyco_transf_28: Glyc 60.1 3.6 7.7E-05 30.4 0.5 19 51-69 7-25 (139)
35 PRK09713 focB putative formate 52.6 1.1E+02 0.0023 26.3 8.3 97 34-134 71-181 (282)
36 PF04632 FUSC: Fusaric acid re 44.4 2.8E+02 0.0061 26.2 13.5 122 58-211 372-493 (650)
37 PRK12446 undecaprenyldiphospho 38.1 8.9 0.00019 33.7 -0.5 21 48-68 7-27 (352)
38 PF02537 CRCB: CrcB-like prote 35.4 1E+02 0.0022 22.3 4.9 110 83-203 5-114 (117)
39 PRK14206 camphor resistance pr 35.2 1E+02 0.0022 22.9 5.0 113 83-205 7-119 (127)
40 PRK14218 camphor resistance pr 32.8 1.6E+02 0.0034 22.2 5.7 109 83-207 14-126 (133)
41 TIGR00790 fnt formate/nitrite 31.9 3E+02 0.0064 22.8 9.4 77 57-133 68-157 (239)
42 PRK14212 camphor resistance pr 29.6 1.5E+02 0.0033 22.1 5.1 113 83-207 8-120 (128)
43 PRK14200 camphor resistance pr 26.8 1.5E+02 0.0033 22.1 4.6 111 83-205 11-121 (127)
44 PRK12446 undecaprenyldiphospho 25.0 22 0.00049 31.2 -0.2 21 160-180 7-27 (352)
45 PRK14219 camphor resistance pr 23.7 2.5E+02 0.0055 21.0 5.4 109 83-207 7-119 (132)
46 PF01226 Form_Nir_trans: Forma 21.1 4.9E+02 0.011 21.7 9.6 99 33-134 60-171 (250)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-53 Score=350.81 Aligned_cols=218 Identities=39% Similarity=0.724 Sum_probs=195.9
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcccc-CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIY-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYI 79 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~-~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi 79 (223)
+++||+||++++|.||++...+... ...+.+.+++.+|+++++.+++++++||||+|||||+++++.||+++.+++.|+
T Consensus 14 ~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl~~~~~Y~ 93 (238)
T KOG0223|consen 14 LIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISLFRAVAYI 93 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcHHHhHHHH
Confidence 4789999999999999999877743 356678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccCc--ccc--cccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHH
Q 036721 80 VAQVVGSLLASGTLSLMLDVTP--QAY--FGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIML 155 (223)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~--~~~--~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~ 155 (223)
++|++|+++|+.+++.+.++++ ... ....|+.+..|+++.|++.||.|+++++..++|+|+. .+.|+.||+.+.+
T Consensus 94 vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~-~~a~l~IG~~v~~ 172 (238)
T KOG0223|consen 94 VAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS-ELAPLAIGFSVGL 172 (238)
T ss_pred HHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-ccHHHHHHHHHHH
Confidence 9999999999999999988641 111 2244566999999999999999999999987887765 8899999999999
Q ss_pred HHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhccccccCCCC
Q 036721 156 NVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHRQANQLHIN 219 (223)
Q Consensus 156 ~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~~~~~~ 219 (223)
.+++++++||++|||||+|+|++..+.|+++|+||++|++|+++++++|+.++.++.+++.++.
T Consensus 173 ~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~~~~~~~~ 236 (238)
T KOG0223|consen 173 NILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPDESEPTKSA 236 (238)
T ss_pred HHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCccccccCcc
Confidence 9999999999999999999999999999999999999999999999999999988755544443
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1.7e-50 Score=344.25 Aligned_cols=214 Identities=50% Similarity=0.978 Sum_probs=187.5
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccccC-CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIYG-KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYI 79 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~~-~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi 79 (223)
+++||+||++|+|++|++.+.+...+ ..++..++++||+++++.+++++++||||+|||||+++++.|+++|++.+.|+
T Consensus 57 ~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~~~~Yi 136 (296)
T PLN00184 57 LIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYV 136 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHHHHHHH
Confidence 47899999999999999876544322 23567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccCcc-------cccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHH
Q 036721 80 VAQVVGSLLASGTLSLMLDVTPQ-------AYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMT 152 (223)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~-------~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~ 152 (223)
++|++|+++|+.+++.+++.... ...++.|..+..++++.|+++|++|+++++.+.+|++..+...|+.+|+.
T Consensus 137 iaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~~~~~~l~IG~~ 216 (296)
T PLN00184 137 ISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGELAGLAIGST 216 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCCCcchHHHHHHH
Confidence 99999999999999988753211 11235566688999999999999999999998666665556789999999
Q ss_pred HHHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhccccc
Q 036721 153 IMLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHRQAN 214 (223)
Q Consensus 153 v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~ 214 (223)
+...++..+++||+++||||||+|+++...|+++|+||++|++|+++++++|+++...+++.
T Consensus 217 v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~ 278 (296)
T PLN00184 217 VLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPL 278 (296)
T ss_pred HHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999998755443
No 3
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=3.8e-49 Score=333.95 Aligned_cols=209 Identities=71% Similarity=1.240 Sum_probs=185.5
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcccc-CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIY-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYI 79 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~-~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi 79 (223)
+++||+||++|+|+++++.+.+... +..+...++++||+++++.+++++++||||+|||||++.++.|+++|++.+.|+
T Consensus 45 ~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~~~~~Yi 124 (283)
T PLN00182 45 LIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYI 124 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHHHHHHHH
Confidence 4799999999999999987643322 223456678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHH
Q 036721 80 VAQVVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFV 159 (223)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~ 159 (223)
++|++|+++|+++++.+++.......++.|..+..++++.|+++|++|+++++....+++..+...++.+|+.+.+.+++
T Consensus 125 ~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~~~~l~iGl~V~~~~~~ 204 (283)
T PLN00182 125 GAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIAVGMTIILNVFV 204 (283)
T ss_pred HHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCCcchhHHHHHHHHHHHHH
Confidence 99999999999999998865444455677878889999999999999999999876565544556899999999999999
Q ss_pred hcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhh
Q 036721 160 AGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKI 209 (223)
Q Consensus 160 ~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~ 209 (223)
.+++||+++||||+|+|+++.+.|+++|+||++|++|+++++++|+.+..
T Consensus 205 ~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 205 AGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred ccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999889999999999999999999999999984
No 4
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=3.7e-49 Score=335.36 Aligned_cols=212 Identities=42% Similarity=0.739 Sum_probs=185.1
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccccC-CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIYG-KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYI 79 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~~-~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi 79 (223)
+++||+||++|+|+++++...+...+ ..++..+++++|+++++.+++++++||||+|||||++.++.++++|++.+.|+
T Consensus 74 ~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~~~~~Yi 153 (298)
T PLN00026 74 LGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYI 153 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHHHHHHHH
Confidence 47899999999999998765543322 23566678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHH
Q 036721 80 VAQVVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFV 159 (223)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~ 159 (223)
++|++|+++|+++++.++++.... ..+.|+.+..++++.|+++|++|+++++.+.+|++..+...++.+|+.++..++.
T Consensus 154 iaQilGAi~aa~~~~~~~~~~~~~-g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~~~~l~iGl~V~~~~l~ 232 (298)
T PLN00026 154 AAQVSASICASFALKGVFHPFMSG-GVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILV 232 (298)
T ss_pred HHHHHHHHHHHHHHHHHhcccccC-ceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCCccchHHHHHHHHHHHH
Confidence 999999999999999988642211 1256777889999999999999999999876666555557889999999999999
Q ss_pred hcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhcccc
Q 036721 160 AGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHRQA 213 (223)
Q Consensus 160 ~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~ 213 (223)
.++.||+++||||||+|++..++|+++|+||++|++|+++++++|+.+..++++
T Consensus 233 ~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~ 286 (298)
T PLN00026 233 AGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREED 286 (298)
T ss_pred hcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999999999999999998655443
No 5
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=1.5e-47 Score=317.23 Aligned_cols=210 Identities=35% Similarity=0.685 Sum_probs=178.5
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccc-c-CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKI-Y-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLY 78 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~-~-~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~y 78 (223)
+++||+||++++|+++++...... + +..++..+++.+|+++++.+++++++||+|+|||||+++++.||+++++.+.|
T Consensus 5 ~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~~~Y 84 (231)
T PRK05420 5 LAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKELVPY 84 (231)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHhHHH
Confidence 478999999999999998654321 1 13346667999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccCcc-cc----c------ccCCCC-CchhHHHHHHHHHHHHHHHhhheeccCCcCCCchh
Q 036721 79 IVAQVVGSLLASGTLSLMLDVTPQ-AY----F------GTVPVG-SNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGG 146 (223)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~-~~----~------~~~~~~-s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~ 146 (223)
+++|++|+++|+.+++.+++++.. .. . .+.|.. +..++++.|+++|++|+++++.. .|+|+.....|
T Consensus 85 ~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~~~~~~p 163 (231)
T PRK05420 85 IIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKRAPAGFAP 163 (231)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCcchH
Confidence 999999999999999988754321 10 0 123332 67899999999999999999987 44554556789
Q ss_pred HHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhccC--CceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 147 VAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKHKF--RGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 147 ~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~--~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
+.+|+.+....+..+++||+++||||||+|+++.++| +++|+||++|++|+++++++|+++++++
T Consensus 164 ~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 164 IAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred HHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999998655 5899999999999999999999987654
No 6
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-48 Score=317.47 Aligned_cols=209 Identities=37% Similarity=0.640 Sum_probs=181.3
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccc----cCCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchh
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKI----YGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVP 76 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~----~~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~ 76 (223)
+++||+||++|++.|+++.+...- .....+..++++||+++++.+|+++++||||+|||||+++++.||++|++.+
T Consensus 8 ~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~~~v~ 87 (241)
T COG0580 8 LLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPWRKVL 87 (241)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCHHHHH
Confidence 368999999999999998875431 1256677899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccCccc----------ccccCCCC-CchhHHHHHHHHHHHHHHHhhheeccCCcCCCch
Q 036721 77 LYIVAQVVGSLLASGTLSLMLDVTPQA----------YFGTVPVG-SNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFG 145 (223)
Q Consensus 77 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~~----------~~~~~~~~-s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~ 145 (223)
.|+++|++|+++|+.+++.++++.... ...+.|.. +..++++.|+++|++|++.++...+|++.+..+.
T Consensus 88 ~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~~~~~a 167 (241)
T COG0580 88 PYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNANAGFA 167 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcccccch
Confidence 999999999999999999987642211 12356654 7788999999999999999999866665533589
Q ss_pred hHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc---------cCCceeeeeecccHHHHHHHHHHHHHhh
Q 036721 146 GVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH---------KFRGIWLYIIGPVIGTVTGGFAYNLIKI 209 (223)
Q Consensus 146 ~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~---------~~~~~~vy~~~p~~Ga~~a~~l~~~~~~ 209 (223)
|+.+|+.+....+..++.||..+|||||+|||+... +.+|.|+||++|++|+++++++|+.++.
T Consensus 168 pl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 168 PLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred HHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999653 2258999999999999999999998764
No 7
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.7e-46 Score=313.76 Aligned_cols=211 Identities=32% Similarity=0.545 Sum_probs=180.7
Q ss_pred ChhHHHHHHHHHHHHHhHhhhc-c-cc----CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccc
Q 036721 1 MIAELIGTYFIIFAGCGAVAVD-K-IY----GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQ 74 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~-~-~~----~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~ 74 (223)
+++||+||++++|.++++.... . .+ +..++..+++.+|+++++.+++++++||+|+|||+|++.++.|++++.+
T Consensus 21 ~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g~~~~~~ 100 (250)
T PLN00166 21 YLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITIIT 100 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHH
Confidence 4689999999999999986542 1 11 1234556789999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcC--CCchhHHHHHH
Q 036721 75 VPLYIVAQVVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAI--GQFGGVAVGMT 152 (223)
Q Consensus 75 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~--~~~~~~~ig~~ 152 (223)
.+.|+++|++|+++|+.+.+.+++++.....+..++.+..++++.|+++|++|+++++....|+|+. +...|+.+|+.
T Consensus 101 ~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~ 180 (250)
T PLN00166 101 GFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFI 180 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHH
Confidence 9999999999999999999888764332222334456788999999999999999999876555432 34789999999
Q ss_pred HHHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 153 IMLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 153 v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
+...++..+++||+++||||+|+|+++.++|+++|+||++|++|+++++++|+.+..+.
T Consensus 181 v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~ 239 (250)
T PLN00166 181 VGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGS 239 (250)
T ss_pred HHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999998886543
No 8
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.7e-46 Score=314.74 Aligned_cols=212 Identities=31% Similarity=0.467 Sum_probs=182.9
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcc---ccC---CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccc
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDK---IYG---KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQ 74 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~---~~~---~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~ 74 (223)
+++||+||++|++.++++.+... .++ ..+.+.+++.+|+++.+.+++++++||+|+|||+|++.++.|++++.+
T Consensus 23 ~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~~~~~~ 102 (252)
T PLN00027 23 ALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNITLLR 102 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCCCCHHH
Confidence 36899999999999998864321 111 234556799999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcC--CCchhHHHHHH
Q 036721 75 VPLYIVAQVVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAI--GQFGGVAVGMT 152 (223)
Q Consensus 75 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~--~~~~~~~ig~~ 152 (223)
.+.|+++|++|+++|+.+.+...++......++.|+.+..++++.|+++|++|+++++....|+|+. +...|+.+|+.
T Consensus 103 ~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~ 182 (252)
T PLN00027 103 GILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAPIAIGFI 182 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccchHHHHHHHH
Confidence 9999999999999999998877654433444566777889999999999999999999875555432 34689999999
Q ss_pred HHHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhccc
Q 036721 153 IMLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHRQ 212 (223)
Q Consensus 153 v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~ 212 (223)
+...++..+++||+++||||+|+|+++..+|+++|+||++|++|+++++++|++++.+++
T Consensus 183 v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~ 242 (252)
T PLN00027 183 VGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGST 242 (252)
T ss_pred HHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999999986543
No 9
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=2.9e-46 Score=318.95 Aligned_cols=211 Identities=29% Similarity=0.526 Sum_probs=178.1
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccccC-CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIYG-KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYI 79 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~~-~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi 79 (223)
+++||+||++++|+++++......++ ..+...++++||+++.+.+++++++||||+|||||+++++.|+++|++.+.|+
T Consensus 53 ~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~~~~Yi 132 (294)
T PTZ00016 53 YVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKKLPGYF 132 (294)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHHHHHHH
Confidence 47899999999999999875433222 23456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccCc--------------c---cccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcC-
Q 036721 80 VAQVVGSLLASGTLSLMLDVTP--------------Q---AYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAI- 141 (223)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~--------------~---~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~- 141 (223)
++|++|+++|++++|.++++.. + ..+.+.|+.+..++++.|+++|++|+++++.+.++++..
T Consensus 133 iaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~ 212 (294)
T PTZ00016 133 VAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITDPNNCPA 212 (294)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhccCccCCC
Confidence 9999999999999998876411 0 112355666788999999999999999999875433322
Q ss_pred CCchhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhh------ccCC----ceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 142 GQFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVK------HKFR----GIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 142 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~------~~~~----~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
....|+.+|+.+....+..++.||+++||||||||+++. ..|+ ++|+||++|++|+++++++|+++..+.
T Consensus 213 ~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~ 292 (294)
T PTZ00016 213 FNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPL 292 (294)
T ss_pred cCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 346799999999999999999999999999999999986 2343 689999999999999999999998654
No 10
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=5.3e-46 Score=311.66 Aligned_cols=214 Identities=28% Similarity=0.457 Sum_probs=180.4
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccc--cC----CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccc
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKI--YG----KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQ 74 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~--~~----~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~ 74 (223)
+++||+||++++++++++...+.. ++ ..+++.+++.||+++++.+++++++||+|+|||||++.++.|+++|++
T Consensus 25 ~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~~~~~~ 104 (256)
T PLN00167 25 YLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGHISVPT 104 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCCCcHhh
Confidence 478999999999999998764321 11 234677899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCc-CCCchhHHHHHHH
Q 036721 75 VPLYIVAQVVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTI 153 (223)
Q Consensus 75 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v 153 (223)
.+.|+++|++|+++|+.+++.++++.........++.+..++++.|+++|++++++++...+++++ .+...|+.+|+.+
T Consensus 105 ~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~~~pl~iGl~v 184 (256)
T PLN00167 105 AMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGAIGPLAIGLVA 184 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCcchHHHHHHH
Confidence 999999999999999999988765422111112233467789999999999999999987443332 2346799999999
Q ss_pred HHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhccccc
Q 036721 154 MLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHRQAN 214 (223)
Q Consensus 154 ~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~ 214 (223)
....+..+++||+++||||+|+|+++.+.|+++|+||++|++|+++++++|+.++.++.++
T Consensus 185 ~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~ 245 (256)
T PLN00167 185 GANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDD 245 (256)
T ss_pred HHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 9999999999999999999999999998999999999999999999999999999755443
No 11
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.8e-46 Score=311.03 Aligned_cols=204 Identities=35% Similarity=0.679 Sum_probs=174.2
Q ss_pred ChhHHHHHHHHHHHHHhHhhh-ccccC------CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCcccc
Q 036721 1 MIAELIGTYFIIFAGCGAVAV-DKIYG------KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRR 73 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~-~~~~~------~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~ 73 (223)
+++||+||++++|.++++... +...+ ..+...+++.+|+++.+.+++++++||||+||+||++.++.||++++
T Consensus 11 ~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~ 90 (227)
T PF00230_consen 11 FLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALTGRISWK 90 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHTTSSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeeeeeeccc
Confidence 479999999999999986652 22211 12456678999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhcccC--cccccc--cCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCC--CchhH
Q 036721 74 QVPLYIVAQVVGSLLASGTLSLMLDVT--PQAYFG--TVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIG--QFGGV 147 (223)
Q Consensus 74 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~~~~--~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~--~~~~~ 147 (223)
+.+.|+++|++|+++|+.+++.++++. ...... ..|..+..++++.|+++|++++++++...+++++.. ...|+
T Consensus 91 ~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~~~~~~p~ 170 (227)
T PF00230_consen 91 KAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKFPLGPLAPL 170 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSSTSSGGHHH
T ss_pred ceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccccccccccccce
Confidence 999999999999999999999998763 222222 234458899999999999999999999866655432 46799
Q ss_pred HHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHH
Q 036721 148 AVGMTIMLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAY 204 (223)
Q Consensus 148 ~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~ 204 (223)
.+|+.+....+..++.||+++||||+++++++...|+++|+||++|++|+++++++|
T Consensus 171 ~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 171 AIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999987
No 12
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.2e-45 Score=311.63 Aligned_cols=213 Identities=40% Similarity=0.764 Sum_probs=185.2
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccccC-CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIYG-KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYI 79 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~~-~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi 79 (223)
+++||+||++++|++++....+...+ ..++..+++.+|+++.+.+++++++||||+|||+|++.++.|+++|.+.+.|+
T Consensus 48 ~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~~~~~~Yi 127 (274)
T PLN00183 48 VLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYI 127 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCHHHHHHHH
Confidence 36899999999999998876543222 23455678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHH
Q 036721 80 VAQVVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFV 159 (223)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~ 159 (223)
++|++|+++|+.+++.+++.+. ....+.|..+..++++.|+++|+++++.++....+++..+...++.+|+.+.+.+++
T Consensus 128 ~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~~~~l~iGl~v~~~v~~ 206 (274)
T PLN00183 128 TAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVIGIAIGLAVLI 206 (274)
T ss_pred HHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCCceehHHHHHHHHHHHh
Confidence 9999999999999888876432 334456666778999999999999999999875554444456789999999999999
Q ss_pred hcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhccccc
Q 036721 160 AGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHRQAN 214 (223)
Q Consensus 160 ~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~ 214 (223)
.+++||+++||||+++|++...+|+++|+||++|++|+++++++|+.++.++..+
T Consensus 207 ~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~~ 261 (274)
T PLN00183 207 TGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPC 261 (274)
T ss_pred ccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999999999999999999999999999998766543
No 13
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-46 Score=311.15 Aligned_cols=212 Identities=29% Similarity=0.555 Sum_probs=182.5
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcccc--CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIY--GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLY 78 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~--~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~y 78 (223)
+++||+||++|+++|+++....... ...++.++.++||+++++.+|+.+++||||+|||||+++++.||++|+|.+.|
T Consensus 35 ~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~k~p~Y 114 (316)
T KOG0224|consen 35 FLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWKKFPVY 114 (316)
T ss_pred HHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChhhhhHH
Confidence 4799999999999999988654333 24456778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccCccc----------------ccccCCCC--CchhHHHHHHHHHHHHHHHhhheeccCCc
Q 036721 79 IVAQVVGSLLASGTLSLMLDVTPQA----------------YFGTVPVG--SNAQSFVAEIIISFLLMFVISGAVTDDRA 140 (223)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~~----------------~~~~~~~~--s~~~~~~~E~~~T~~l~~~~~~~~~~~~~ 140 (223)
+++|++||++|+..+|..+++.... .+.|.|.. +.+++|+.|+++|.+|+..++.+ +|+|.
T Consensus 115 ~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~aI-~D~rN 193 (316)
T KOG0224|consen 115 VLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFAI-TDKRN 193 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeEE-ecCCC
Confidence 9999999999999999987743221 12255654 89999999999999999999998 55544
Q ss_pred --CCCchhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-----------cCCceeeeeecccHHHHHHHHHHHHH
Q 036721 141 --IGQFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-----------KFRGIWLYIIGPVIGTVTGGFAYNLI 207 (223)
Q Consensus 141 --~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-----------~~~~~~vy~~~p~~Ga~~a~~l~~~~ 207 (223)
.+.+.|+.+|+.+.++-...+..+|..+||||||+||++.. +.++.|+.|++|++|+++++++|+++
T Consensus 194 ~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~ 273 (316)
T KOG0224|consen 194 PIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFF 273 (316)
T ss_pred CCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheee
Confidence 34567999999999999999999999999999999999952 22568999999999999999999999
Q ss_pred hhcccc
Q 036721 208 KIHRQA 213 (223)
Q Consensus 208 ~~~~~~ 213 (223)
...+.+
T Consensus 274 Ig~h~~ 279 (316)
T KOG0224|consen 274 IGFHIP 279 (316)
T ss_pred eeccCC
Confidence 987765
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=7.4e-44 Score=295.55 Aligned_cols=207 Identities=37% Similarity=0.739 Sum_probs=177.3
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccccC--CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIYG--KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLY 78 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~~--~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~y 78 (223)
+++||+||+++++.++++...+..++ ..++..+++.||+.+.+.+++++++||+|+|||+|++.++.|+++|++.+.|
T Consensus 3 ~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~~y 82 (228)
T cd00333 3 YLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVIPY 82 (228)
T ss_pred hhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHHHH
Confidence 47899999999999999876544322 2345667999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccCcccc----------cccCCC--CCchhHHHHHHHHHHHHHHHhhheeccCCc--CCCc
Q 036721 79 IVAQVVGSLLASGTLSLMLDVTPQAY----------FGTVPV--GSNAQSFVAEIIISFLLMFVISGAVTDDRA--IGQF 144 (223)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~~~----------~~~~~~--~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~--~~~~ 144 (223)
+++|++|+++|+.+.+.+++++.... .++.|. .+..++++.|+++|+++++.++....++++ ....
T Consensus 83 ~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~~~ 162 (228)
T cd00333 83 IIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPGGL 162 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCCCc
Confidence 99999999999999988876432211 113333 378899999999999999999987544432 3446
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhcc---CCceeeeeecccHHHHHHHHHHHHH
Q 036721 145 GGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKHK---FRGIWLYIIGPVIGTVTGGFAYNLI 207 (223)
Q Consensus 145 ~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~---~~~~~vy~~~p~~Ga~~a~~l~~~~ 207 (223)
.++.+|+.+....+..+++||+++||||++++++.++. |+++|+||++|++|+++++++|+++
T Consensus 163 ~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 163 APLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred HHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 78999999999999999999999999999999999975 9999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=4.8e-42 Score=282.55 Aligned_cols=202 Identities=37% Similarity=0.662 Sum_probs=171.3
Q ss_pred hHHHHHHHHHHHHHhHhhhcccc----C--CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchh
Q 036721 3 AELIGTYFIIFAGCGAVAVDKIY----G--KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVP 76 (223)
Q Consensus 3 ~EfigT~~lvf~~~~~~~~~~~~----~--~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~ 76 (223)
+||+||+++++.++++......+ + ..+...+++.||+.+...+++++++||+|+|||+|++.++.|++++++.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 69999999999999987652211 1 11455679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccCcc---ccccc-CCCCCchhHHHHHHHHHHHHHHHhhheeccCCc--CCCchhHHHH
Q 036721 77 LYIVAQVVGSLLASGTLSLMLDVTPQ---AYFGT-VPVGSNAQSFVAEIIISFLLMFVISGAVTDDRA--IGQFGGVAVG 150 (223)
Q Consensus 77 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~---~~~~~-~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~--~~~~~~~~ig 150 (223)
.|+++|++|+++|+.+.+.++++... ..... .++.+..+.++.|+++|++++++++....++++ .....++.+|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 99999999999999999988765321 11111 233478899999999999999999987544322 2236899999
Q ss_pred HHHHHHHHHhcCCCCCccchHhhHHHHHhhc--cCCceeeeeecccHHHHHHHHHH
Q 036721 151 MTIMLNVFVAGPISGASMNPARSIGPAIVKH--KFRGIWLYIIGPVIGTVTGGFAY 204 (223)
Q Consensus 151 ~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~--~~~~~~vy~~~p~~Ga~~a~~l~ 204 (223)
+.+...++..+++||+++||||++++++..+ +|+++|+||++|++|+++++.+|
T Consensus 161 ~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 89999999999999999998875
No 16
>PLN00184 aquaporin NIP1; Provisional
Probab=99.69 E-value=3.3e-17 Score=140.03 Aligned_cols=99 Identities=26% Similarity=0.406 Sum_probs=84.4
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccC-Cc--CCCc--hhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDD-RA--IGQF--GGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~-~~--~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 185 (223)
+..|.++.|+++|++|++++++....+ .+ .... .++.+|+.+++.+++.+++||+|+||||++++++.++ +|++
T Consensus 52 ~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~ 131 (296)
T PLN00184 52 PFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQ 131 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHH
Confidence 567899999999999999998764221 11 1123 3567799999999999999999999999999999987 8999
Q ss_pred eeeeeecccHHHHHHHHHHHHHhhc
Q 036721 186 IWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 186 ~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
.|+||++|++|+++|+++++.++..
T Consensus 132 ~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 132 VPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998854
No 17
>PLN00026 aquaporin NIP; Provisional
Probab=99.69 E-value=3.5e-17 Score=139.67 Aligned_cols=99 Identities=23% Similarity=0.409 Sum_probs=84.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccC-CcC--CCc--hhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDD-RAI--GQF--GGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~-~~~--~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 185 (223)
+.+|.++.|+++||+|+++++.....+ +.. ... .++.+|+.+++.+++.+++||+|+||||++++++.++ +|++
T Consensus 69 ~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~~ 148 (298)
T PLN00026 69 SLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKH 148 (298)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHHH
Confidence 677999999999999999998643222 111 122 3579999999999999999999999999999999876 8999
Q ss_pred eeeeeecccHHHHHHHHHHHHHhhc
Q 036721 186 IWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 186 ~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
.|+||++|++|+++|+++++.++.+
T Consensus 149 ~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 149 VPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998865
No 18
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.66 E-value=1e-16 Score=135.68 Aligned_cols=107 Identities=29% Similarity=0.510 Sum_probs=89.5
Q ss_pred ccccCCCC---CchhHHHHHHHHHHHHHHHhhheeccCCcCC---Cc--hhHHHHHHHHHHHHHhcCCCCCccchHhhHH
Q 036721 104 YFGTVPVG---SNAQSFVAEIIISFLLMFVISGAVTDDRAIG---QF--GGVAVGMTIMLNVFVAGPISGASMNPARSIG 175 (223)
Q Consensus 104 ~~~~~~~~---s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~---~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~ 175 (223)
.++..|.. +.+|.++.|+++||+++++.++...+++... .. .++.+|+.+.+.+++.+++||+|+||||+++
T Consensus 32 ~~~~~~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla 111 (274)
T PLN00183 32 LFGCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIA 111 (274)
T ss_pred hccccCCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHH
Confidence 34555643 6789999999999999999988754432211 22 4568999999999999999999999999999
Q ss_pred HHHhhc-cCCceeeeeecccHHHHHHHHHHHHHhhc
Q 036721 176 PAIVKH-KFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 176 ~~~~~~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
+++.++ +|++.|+||++|++|+++|+.+++.++..
T Consensus 112 ~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 147 (274)
T PLN00183 112 FATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGV 147 (274)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999987 89999999999999999999999888754
No 19
>PLN00167 aquaporin TIP5; Provisional
Probab=99.62 E-value=1e-15 Score=128.64 Aligned_cols=99 Identities=23% Similarity=0.410 Sum_probs=85.1
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccCC----cC------CCchhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDDR----AI------GQFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH 181 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~----~~------~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~ 181 (223)
+.+|.++.|+++|++++++.++...+++ +. ....++.+|+.+++.+++.+++||+|+||||++++.+.++
T Consensus 20 ~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~ 99 (256)
T PLN00167 20 NALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGH 99 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCC
Confidence 5678999999999999999988754221 11 0136799999999999999999999999999999999876
Q ss_pred -cCCceeeeeecccHHHHHHHHHHHHHhhc
Q 036721 182 -KFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 182 -~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
+|++.|+||++|++|+++++.+++.++..
T Consensus 100 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 100 ISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 79999999999999999999999888654
No 20
>PLN00166 aquaporin TIP2; Provisional
Probab=99.60 E-value=1e-15 Score=128.27 Aligned_cols=100 Identities=22% Similarity=0.359 Sum_probs=84.4
Q ss_pred CCchhHHHHHHHHHHHHHHHhhheecc--CC---c---CCC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhh
Q 036721 111 GSNAQSFVAEIIISFLLMFVISGAVTD--DR---A---IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVK 180 (223)
Q Consensus 111 ~s~~~~~~~E~~~T~~l~~~~~~~~~~--~~---~---~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~ 180 (223)
.+..|+++.|+++|++++++.++...+ +. + ... ..++.+|+.+++.+++.+++||+|+||||++++.+.+
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 356789999999999999999887432 11 1 111 2467799999999999999999999999999999986
Q ss_pred c-cCCceeeeeecccHHHHHHHHHHHHHhhc
Q 036721 181 H-KFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 181 ~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
+ +|.+.|+||++|++|+++++.+++.++..
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5 78999999999999999999999988753
No 21
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.60 E-value=8.7e-16 Score=127.45 Aligned_cols=97 Identities=27% Similarity=0.411 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHHhhheeccCCcC----C--CchhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCcee
Q 036721 115 QSFVAEIIISFLLMFVISGAVTDDRAI----G--QFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRGIW 187 (223)
Q Consensus 115 ~~~~~E~~~T~~l~~~~~~~~~~~~~~----~--~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~~ 187 (223)
|.++.|+++|+++++..++...+++.. . ...++.+|+.+...+++.+++||+|+|||+++++.+.++ +|++.|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 468899999999999999875443321 1 135789999999999999999999999999999999987 799999
Q ss_pred eeeecccHHHHHHHHHHHHHhhcc
Q 036721 188 LYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 188 vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
+||++|++|+++++.+++.+++++
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~ 104 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGL 104 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999999999999999888764
No 22
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.60 E-value=1e-15 Score=130.13 Aligned_cols=98 Identities=27% Similarity=0.419 Sum_probs=83.6
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccCCc---CCCc--hhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDDRA---IGQF--GGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~---~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 185 (223)
+..|.+++|+++|++|++..++...+.+. .... .++.+|+.+++.+++.+++||+|+|||++++.++.++ +|.+
T Consensus 40 ~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~~ 119 (283)
T PLN00182 40 CLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQ 119 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHHH
Confidence 45689999999999999999886433221 1122 2468999999999999999999999999999999988 9999
Q ss_pred eeeeeecccHHHHHHHHHHHHHhh
Q 036721 186 IWLYIIGPVIGTVTGGFAYNLIKI 209 (223)
Q Consensus 186 ~~vy~~~p~~Ga~~a~~l~~~~~~ 209 (223)
.|.||++|++|+++|+++.+.+++
T Consensus 120 ~~~Yi~aQ~lGa~~ga~~~~~~~~ 143 (283)
T PLN00182 120 VPLYIGAQLTGSLLASLTLRLMFN 143 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998884
No 23
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.58 E-value=1.5e-15 Score=127.14 Aligned_cols=100 Identities=27% Similarity=0.469 Sum_probs=85.5
Q ss_pred CchhHHHHHHHHHHHHHHHhhheecc----CCcCCCc--hhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCC
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTD----DRAIGQF--GGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFR 184 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~----~~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 184 (223)
...|.+++||++|++|++..+++..+ +.+.+.. ..+.+|++++..+++++.+||+|+|||++++..++++ +|+
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 56789999999999999998876532 2222222 3589999999999999999999999999999999998 999
Q ss_pred ceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 185 GIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 185 ~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
++++|.++|++|+++++.....++++.
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d~ 136 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYDA 136 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887777654
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.58 E-value=2.5e-15 Score=124.71 Aligned_cols=97 Identities=27% Similarity=0.352 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHHHHHHHhhheecc----CCcCCCc--hhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCce
Q 036721 114 AQSFVAEIIISFLLMFVISGAVTD----DRAIGQF--GGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRGI 186 (223)
Q Consensus 114 ~~~~~~E~~~T~~l~~~~~~~~~~----~~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~ 186 (223)
.|.++.|+++|+++++..++.... ++..... .++.+|+.+.+.+++.+++||+|+||||++++.+.++ +|++.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 578999999999999988775321 1111112 3689999999999999999999999999999999987 89999
Q ss_pred eeeeecccHHHHHHHHHHHHHhhc
Q 036721 187 WLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 187 ~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
|.||++|++|+++|+.+.+.+++.
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999888877643
No 25
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.57 E-value=2.6e-15 Score=128.62 Aligned_cols=99 Identities=23% Similarity=0.444 Sum_probs=84.3
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccCCc---CCC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDDRA---IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~---~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 185 (223)
+..+.+++|+++|++++++.++...+... ... ..++.+|+.+.+.+++.+++||+|+|||+++++++.++ +|.+
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 34578999999999999998876433211 111 24678999999999999999999999999999999988 8999
Q ss_pred eeeeeecccHHHHHHHHHHHHHhhc
Q 036721 186 IWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 186 ~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
.|.||++|++|+++|+++.+.++++
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999888765
No 26
>PLN00027 aquaporin TIP; Provisional
Probab=99.56 E-value=8.4e-15 Score=123.09 Aligned_cols=98 Identities=22% Similarity=0.333 Sum_probs=82.5
Q ss_pred CchhHHHHHHHHHHHHHHHhhheec------cCCc--CCC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVT------DDRA--IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH 181 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~------~~~~--~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~ 181 (223)
...|.++.|+++|++++++.++... ++++ ... ..++.+|+.+.+.+++.+++||+|+||||++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4578899999999999999987631 1111 111 35799999999999999999999999999999998776
Q ss_pred -cCCceeeeeecccHHHHHHHHHHHHHhh
Q 036721 182 -KFRGIWLYIIGPVIGTVTGGFAYNLIKI 209 (223)
Q Consensus 182 -~~~~~~vy~~~p~~Ga~~a~~l~~~~~~ 209 (223)
+|.+.|+||++|++|+++++.+++.+..
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7889999999999999999999987764
No 27
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.52 E-value=1.4e-14 Score=119.75 Aligned_cols=103 Identities=27% Similarity=0.449 Sum_probs=85.8
Q ss_pred chhHHHHHHHHHHHHHHHhhheecc---CC----cCCC-chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cC
Q 036721 113 NAQSFVAEIIISFLLMFVISGAVTD---DR----AIGQ-FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KF 183 (223)
Q Consensus 113 ~~~~~~~E~~~T~~l~~~~~~~~~~---~~----~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 183 (223)
..+.++.|+++|++|++...+.... ++ ..+. ...+.+|+.+.+.+++.+++||+|+|||++++.++.++ +|
T Consensus 4 ~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~ 83 (241)
T COG0580 4 LTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPW 83 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCH
Confidence 4567899999999999998775421 11 1111 25689999999999999999999999999999999998 99
Q ss_pred CceeeeeecccHHHHHHHHHHHHHhhcccccc
Q 036721 184 RGIWLYIIGPVIGTVTGGFAYNLIKIHRQANQ 215 (223)
Q Consensus 184 ~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~~ 215 (223)
++...|+++|++|+++++.+...+++++..+.
T Consensus 84 ~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~ 115 (241)
T COG0580 84 RKVLPYIVAQVLGAFAGAALLYLLYYGKILET 115 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhh
Confidence 99999999999999999998888887654433
No 28
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.48 E-value=3.6e-14 Score=116.87 Aligned_cols=93 Identities=28% Similarity=0.439 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHhhheecc--CCc----CC--C--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCcee
Q 036721 119 AEIIISFLLMFVISGAVTD--DRA----IG--Q--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRGIW 187 (223)
Q Consensus 119 ~E~~~T~~l~~~~~~~~~~--~~~----~~--~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~~ 187 (223)
.|+++|++++++.+....+ .++ .+ . ..++.+|+.+...+++.+++||+|+||||++++.+.++ +|++.|
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 4999999999999987543 111 11 1 25789999999999999999999999999999999987 899999
Q ss_pred eeeecccHHHHHHHHHHHHHhhcc
Q 036721 188 LYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 188 vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
+||++|++|+++++.+++.++++.
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~ 104 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGL 104 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999887654
No 29
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1e-13 Score=114.82 Aligned_cols=100 Identities=25% Similarity=0.424 Sum_probs=87.1
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccCC-cCCC----chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDDR-AIGQ----FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~-~~~~----~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 185 (223)
+.+|+++.||++|++++++.++.....+ ...+ ...+..|+.+++.+++.+++||+|+|||++++..+.++ ++.+
T Consensus 9 ~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl~~ 88 (238)
T KOG0223|consen 9 SFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISLFR 88 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcHHH
Confidence 6789999999999999999998753322 1111 25689999999999999999999999999999999987 7889
Q ss_pred eeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 186 IWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 186 ~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
...||++|++|+++++.+.+.+.+.+
T Consensus 89 ~~~Y~vaQ~lGa~~g~~~l~~~~~~~ 114 (238)
T KOG0223|consen 89 AVAYIVAQLLGAIAGAALLKVVTPGQ 114 (238)
T ss_pred hHHHHHHHHHHHHHHHHHHheecCcc
Confidence 99999999999999999999998874
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.36 E-value=2.8e-13 Score=112.21 Aligned_cols=100 Identities=28% Similarity=0.448 Sum_probs=81.9
Q ss_pred CchhHHHHHHHHHHHHHHHhhheec--cCCc-C---C---C--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhh
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVT--DDRA-I---G---Q--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVK 180 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~--~~~~-~---~---~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~ 180 (223)
+..|.+++|+++|+++++....... ++.. + . . ..++.+|+.+...++..+++||+|+|||++++..+.+
T Consensus 6 ~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g 85 (227)
T PF00230_consen 6 SLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALTG 85 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeeee
Confidence 5689999999999999998876421 1111 1 0 1 2346779999999999999999999999999999998
Q ss_pred c-cCCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 181 H-KFRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 181 ~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
+ +|++...|+++|++|+++|+.+.+.++++.
T Consensus 86 ~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~ 117 (227)
T PF00230_consen 86 RISWKKAIVYIIAQFLGAFLGALLVYALYPDS 117 (227)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHH
T ss_pred eecccceeeEEeeccccccccccchhhcccCc
Confidence 7 899999999999999999999998888764
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=92.94 E-value=0.86 Score=38.63 Aligned_cols=102 Identities=11% Similarity=0.157 Sum_probs=60.2
Q ss_pred chHHHHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcc--c---Cccc
Q 036721 30 FPGVCVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLD--V---TPQA 103 (223)
Q Consensus 30 ~~~~~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~---~~~~ 103 (223)
.+.-++.+++++.+.+++-+.. +| |-..+..-..++++++++.+--+.-=.+|=++|+.++..+++ . .++.
T Consensus 64 ~lvg~~~F~~GLilVv~~g~ELfT~---n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 64 KLVGGLVFSLGLILVVIAGSELFTS---NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHhhhhCcccccc---chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 3444666667776666664443 21 444444456788999999888887777888887776654432 1 1111
Q ss_pred ccc-----c---CCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 104 YFG-----T---VPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 104 ~~~-----~---~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
..+ . --+.+..+.|.--.++..+..+.+...
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~ 179 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMS 179 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 0 012255666666677777777777664
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=80.89 E-value=29 Score=29.57 Aligned_cols=98 Identities=13% Similarity=0.144 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcccC----c---cccc
Q 036721 34 CVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLDVT----P---QAYF 105 (223)
Q Consensus 34 ~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~---~~~~ 105 (223)
+..+++++.+.+..-++. +| |=.......+.||.++++.+--+.-=.+|=++|+.+...+.... + ....
T Consensus 62 g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~ 138 (268)
T PRK11562 62 GATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (268)
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 445566555555553333 33 43333345678889988888777766677776666554432110 0 1110
Q ss_pred c----cCCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 106 G----TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 106 ~----~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
. .--+.+..+.++-=.++.++..+.+...
T Consensus 139 ~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~ 171 (268)
T PRK11562 139 HSVALAKTTAPAMVLFFKGALCNWLVCLAIWMA 171 (268)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0012355666666677777777766654
No 33
>PRK10805 formate transporter; Provisional
Probab=78.34 E-value=22 Score=30.60 Aligned_cols=97 Identities=8% Similarity=0.098 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcccC------cccccc
Q 036721 34 CVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLDVT------PQAYFG 106 (223)
Q Consensus 34 ~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~------~~~~~~ 106 (223)
++.+.+++.+.+..-++. +| |-..+++ .+.||.++++.+-.+.-=.+|=++|+.+.-.+.... +.....
T Consensus 72 ~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T PRK10805 72 GICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_pred HHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHH
Confidence 455555555555554443 55 6555544 678899998888545444455555444432221100 111100
Q ss_pred -------cCCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 107 -------TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 107 -------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
.--+.+..+.++-=.++.++..+.+...
T Consensus 148 ~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~ 182 (285)
T PRK10805 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012356666777777777777777643
No 34
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=60.12 E-value=3.6 Score=30.44 Aligned_cols=19 Identities=26% Similarity=0.354 Sum_probs=16.9
Q ss_pred cccccccHHHHHHHHHhcC
Q 036721 51 ISGAHFNPAVTIALAIFRQ 69 (223)
Q Consensus 51 vSGah~NPavTla~~l~g~ 69 (223)
=|+||+||.+.++..+.++
T Consensus 7 Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRR 25 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHhcc
Confidence 4789999999999999875
No 35
>PRK09713 focB putative formate transporter; Provisional
Probab=52.60 E-value=1.1e+02 Score=26.35 Aligned_cols=97 Identities=9% Similarity=0.046 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHH----HHHHHHHHHhhhhhhhcc-cCcccccc-
Q 036721 34 CVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIV----AQVVGSLLASGTLSLMLD-VTPQAYFG- 106 (223)
Q Consensus 34 ~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~----aQ~~Ga~~g~~~~~~~~~-~~~~~~~~- 106 (223)
++.+.+++.+.+..-++. +| |=. ++.....||.++++.+-.+. +-++|+++-+.+.+.--. ..+....+
T Consensus 71 g~~F~vGLilIv~~g~ELfTg---N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~~~ 146 (282)
T PRK09713 71 GLCFTLGFILLAVCGTSLFTS---SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGV 146 (282)
T ss_pred HHHHHHHHHHHHHhCccccHH---HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhHHH
Confidence 455566666555554443 43 222 22335688999888885444 455555544444332110 00111000
Q ss_pred -------cCCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 107 -------TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 107 -------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
.--+.+..+.|+--.++-++..+.+...
T Consensus 147 ~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~ 181 (282)
T PRK09713 147 AVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMS 181 (282)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112366777777788888888877654
No 36
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=44.36 E-value=2.8e+02 Score=26.21 Aligned_cols=122 Identities=16% Similarity=0.263 Sum_probs=67.4
Q ss_pred HHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheecc
Q 036721 58 PAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTD 137 (223)
Q Consensus 58 PavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~ 137 (223)
.+|+.+.+-....+.+....++.+.++|+.+|..+...+++..+ + + .++...+...++.......
T Consensus 372 ~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~----------~-f----~~L~l~l~~~l~~~~~~~~ 436 (650)
T PF04632_consen 372 AAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD----------G-F----PLLALVLAPFLFLGGLLMA 436 (650)
T ss_pred HHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC----------c-H----HHHHHHHHHHHHHHHHHHc
Confidence 33333334445567888888999999999999988888876432 1 1 1222222222212111111
Q ss_pred CCcCCCchhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 138 DRAIGQFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 138 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
++ .......++.+...... .+......|++.-+-. .++.++|.+++.+.++++.+..
T Consensus 437 ~p---~~~~~g~~~~v~f~~~~-~~~n~~~~d~~~f~n~-------------~la~l~G~~~a~l~~~li~p~~ 493 (650)
T PF04632_consen 437 RP---RTAYIGLGFAVFFLLLL-GPGNPYSYDFATFLNR-------------ALAILLGIVIAALVFRLIRPFS 493 (650)
T ss_pred Cc---hHHHHHHHHHHHHHHHh-cCCCCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHHCCCC
Confidence 21 23344555555443333 3333455666654432 2467888889988888887643
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=38.13 E-value=8.9 Score=33.74 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=18.0
Q ss_pred hcccccccccHHHHHHHHHhc
Q 036721 48 LAHISGAHFNPAVTIALAIFR 68 (223)
Q Consensus 48 ~~~vSGah~NPavTla~~l~g 68 (223)
.+.-+|||+.||+.++-.+.+
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 456689999999999999875
No 38
>PF02537 CRCB: CrcB-like protein; InterPro: IPR003691 Three genes, crcA, cspE and crcB when present in high copy confer camphor resistance on a cell and suppress mutations in the chromosomal partition gene mukB in Escherichia coli. The cspE gene has been previously identified as a cold shock-like protein with homologues in all organisms tested []. Camphor and mukB mutations may interfere with chromosome condensation and high copy crcA, cspE and crcB have been implicated as promoting or protecting chromosome folding [].; GO: 0016020 membrane
Probab=35.44 E-value=1e+02 Score=22.27 Aligned_cols=110 Identities=10% Similarity=-0.024 Sum_probs=57.1
Q ss_pred HHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHHhcC
Q 036721 83 VVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFVAGP 162 (223)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~ 162 (223)
.+|+.+|+.+-+.+....+ ..+....+..+..-.++++++-+..-....+. ..........++.+.. .|.
T Consensus 5 ~lgg~~Ga~~R~~l~~~~~-----~~~~~~p~gt~~vN~~g~fllG~~~~~~~~~~-~~~~~~~~~~~l~~Gf----~G~ 74 (117)
T PF02537_consen 5 ALGGALGALLRYGLSKLLN-----RRWGWFPWGTLLVNVLGCFLLGLLAGLLAKKL-ASKWSPSLRLFLGTGF----CGG 74 (117)
T ss_pred HHHHHHHHHHHHHHHHHhc-----cccCCCchHHHHHHHHHHHHHHHHHHHHHHhc-cccCCHHHHHHHHHHH----cch
Confidence 5788888877766543211 11111246678899999998887765432111 1112223333333322 122
Q ss_pred CCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHH
Q 036721 163 ISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFA 203 (223)
Q Consensus 163 ~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l 203 (223)
.|- .--.+.+.......+++.+...|.+....++++++.+
T Consensus 75 lTT-fSt~~~e~~~l~~~~~~~~~~~y~~~s~~~g~~~~~~ 114 (117)
T PF02537_consen 75 LTT-FSTFILETFQLFESGRWFRALLYVLVSVILGLLAAWL 114 (117)
T ss_pred HHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 220 0012222222222336667788888888888887664
No 39
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=35.21 E-value=1e+02 Score=22.94 Aligned_cols=113 Identities=11% Similarity=-0.038 Sum_probs=56.9
Q ss_pred HHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHHhcC
Q 036721 83 VVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFVAGP 162 (223)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~ 162 (223)
.+|+.+|+.+-|.+-.-.+. ..+..-.+..+..-.+++|++-+..-....+++. ....++...+.+. ..|.
T Consensus 7 ~~Gg~lGa~~Ry~l~~~~~~----~~~~~fp~gTl~vNi~GsfllG~~~~~~~~~~~~-~~~~~~~~~l~tG----f~Gg 77 (127)
T PRK14206 7 ALGSALGGTLRFWLSGLVAE----ATGGTFPWGTLVINVSGSFLIGFFATLTGPEGRV-FVGESWRLFVMVG----VCGG 77 (127)
T ss_pred HHhHHHHHHHHHHHHHHHhh----cccCCCchHHHHHHHHHHHHHHHHHHHHhhcccc-cCCHHHHHHHHHH----Hccc
Confidence 48888888766654321111 1111122457888999999988765432111111 1111233322222 2233
Q ss_pred CCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHH
Q 036721 163 ISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYN 205 (223)
Q Consensus 163 ~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~ 205 (223)
.|-- ---+.+....+-.++|.....|++...+++++++.+=.
T Consensus 78 fTTF-STf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~~G~ 119 (127)
T PRK14206 78 FTTF-SSFSLQTLNLARDGDWLRAGGNVVLSVVFCLLAVWLGH 119 (127)
T ss_pred cccH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3311 11122222222234666667899999999999877643
No 40
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=32.79 E-value=1.6e+02 Score=22.24 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=56.8
Q ss_pred HHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHHhcC
Q 036721 83 VVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFVAGP 162 (223)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~ 162 (223)
.+|+.+|+.+-|.+-...+. ..+..-.+..+..-.+++|++-+..-.. . ++. ....++...+.+. ..|.
T Consensus 14 ~~GG~~Ga~lRy~l~~~~~~----~~~~~fP~gTl~VNv~GsfllG~l~~~~-~-~~~-~~~~~~~~~l~tG----flGg 82 (133)
T PRK14218 14 MLGGAFGSGLRFVIGSCLLQ----RFGAGFPWGTLAVNLIGSFVAGFLLIWL-D-KRG-SAGWPWRMLLIVG----LIGG 82 (133)
T ss_pred HHHHHHHHHHHHHHHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHHHH-H-hcc-CCCHHHHHHHHHH----Hhch
Confidence 48999999876665321110 1111223567889999999987765332 1 221 1112232222221 1233
Q ss_pred CCCCccchHhhHHHHHh----hccCCceeeeeecccHHHHHHHHHHHHH
Q 036721 163 ISGASMNPARSIGPAIV----KHKFRGIWLYIIGPVIGTVTGGFAYNLI 207 (223)
Q Consensus 163 ~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 207 (223)
.| ---+++.... .+++.....|.....+++++++.+=..+
T Consensus 83 fT-----TFSTf~~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 126 (133)
T PRK14218 83 LT-----TFSSLMMECLVFVRSDRSLMVGIYLCITLLFGLLFVFLGARL 126 (133)
T ss_pred hc-----cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 1112222222 2355566689999999999988765433
No 41
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=31.89 E-value=3e+02 Score=22.82 Aligned_cols=77 Identities=10% Similarity=0.133 Sum_probs=43.4
Q ss_pred cHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhccc-----Ccc-cccc-------cCCCCCchhHHHHHHHH
Q 036721 57 NPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLDV-----TPQ-AYFG-------TVPVGSNAQSFVAEIII 123 (223)
Q Consensus 57 NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~-----~~~-~~~~-------~~~~~s~~~~~~~E~~~ 123 (223)
|-.......+.||.++++.+-.+.-=.+|=++|+.+.-.+... ++. .... .--+.+..+.++--+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 4444434477899998888877777777777776655433211 111 1100 01123556666666667
Q ss_pred HHHHHHHhhh
Q 036721 124 SFLLMFVISG 133 (223)
Q Consensus 124 T~~l~~~~~~ 133 (223)
.+++.+.+..
T Consensus 148 n~lV~lav~~ 157 (239)
T TIGR00790 148 NWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHH
Confidence 7777666654
No 42
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=29.63 E-value=1.5e+02 Score=22.13 Aligned_cols=113 Identities=10% Similarity=0.033 Sum_probs=56.9
Q ss_pred HHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHHhcC
Q 036721 83 VVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFVAGP 162 (223)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~ 162 (223)
.+|+.+|+.+-|.+-...+ +.. +..-.+..+..-.+++|++-+..-.. .+++. ....+...+.+. ..|.
T Consensus 8 ~~Gg~~Ga~~Ry~l~~~~~-~~~---~~~fP~~Tl~vN~~GsfllG~~~~~~-~~~~~--~~~~~~~~l~tG----flGg 76 (128)
T PRK14212 8 AAGGALGAVSRYGLNNLTV-KLL---GDSFPYGTLIVNCLGCFVLGFLMQWG-FSSDS--HNTHLKLMLTAG----FLGA 76 (128)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcc---cCCCchHHHHHHHHHHHHHHHHHHHH-HhccC--CCHHHHHHHHhh----HhcC
Confidence 4889999887666532111 111 11122557888999999987654332 11111 112232222222 1233
Q ss_pred CCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHH
Q 036721 163 ISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLI 207 (223)
Q Consensus 163 ~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 207 (223)
.|-- ---+.+....+-.++|.....|.....+++++++.+=..+
T Consensus 77 fTTF-STf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 120 (128)
T PRK14212 77 FTTF-STFSYETLDCFKAGDYFNGFSNILANVLLGLLMVFIGAYL 120 (128)
T ss_pred cccH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3310 0011122212222466667789999999999988765443
No 43
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=26.80 E-value=1.5e+02 Score=22.12 Aligned_cols=111 Identities=9% Similarity=0.078 Sum_probs=55.6
Q ss_pred HHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHHhcC
Q 036721 83 VVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFVAGP 162 (223)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~ 162 (223)
.+|+.+|+.+-|.+-...+. ..+..-.+..+..-.+++|++-+..-.. . ++.. ....+...+.+. ..|.
T Consensus 11 ~~GG~lGa~~Ry~l~~~~~~----~~~~~fP~gTl~VN~~GsfllG~~~~~~-~-~~~~-~~~~~~~~l~tG----f~Gg 79 (127)
T PRK14200 11 ALGGAFGACSRYLVSELCVV----LLGRGFPYGTLTVNVVGSFIMGLLIAAF-E-NELL-ATEPWRQIIGLG----FLGA 79 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHh----hcCCCCchHHHHHHHHHHHHHHHHHHHH-H-hccC-CCHHHHHHHHHH----Hhcc
Confidence 48888888766654321111 1111123567888899999887765432 1 2110 111122222211 1233
Q ss_pred CCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHH
Q 036721 163 ISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYN 205 (223)
Q Consensus 163 ~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~ 205 (223)
.|-- ---+.+....+-.++|.....|.+...+++++++.+=.
T Consensus 80 fTTF-STf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 121 (127)
T PRK14200 80 LTTF-STFSMDNVLLMQQGAFFKMGLNVLLNVVLSISAAWIGF 121 (127)
T ss_pred chhH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3310 01112222222224566677899999999999887643
No 44
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=25.00 E-value=22 Score=31.20 Aligned_cols=21 Identities=24% Similarity=0.313 Sum_probs=17.6
Q ss_pred hcCCCCCccchHhhHHHHHhh
Q 036721 160 AGPISGASMNPARSIGPAIVK 180 (223)
Q Consensus 160 ~~~~sG~~lNPA~~l~~~~~~ 180 (223)
+++=||+|+.||.+++..+-.
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 455599999999999988874
No 45
>PRK14219 camphor resistance protein CrcB; Provisional
Probab=23.73 E-value=2.5e+02 Score=20.98 Aligned_cols=109 Identities=9% Similarity=0.074 Sum_probs=55.0
Q ss_pred HHHHHHHhhhhhhhcccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHHHHHHHHHHHhcC
Q 036721 83 VVGSLLASGTLSLMLDVTPQAYFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVGMTIMLNVFVAGP 162 (223)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~ 162 (223)
.+|+.+|+.+-|.+-...+. ..+..-.+..+..-.+++|++-+..-.. .++.. ....+...+.+. ..|.
T Consensus 7 ~lGg~lGa~~Ry~l~~~~~~----~~~~~fP~gTl~vNi~GsfllG~~~~~~-~~~~~--~~~~~~~~l~tG----f~Gg 75 (132)
T PRK14219 7 GIAGILGALSRYYLGLTIHE----FWHHTFPLATLLINLAGCFLLAWLTTYI-AKLNI--LPSDVITGIGTG----FIGS 75 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHh----ccCCCCcHHHHHHHHHHHHHHHHHHHHH-HhccC--CCHHHHHHHHHH----Hccc
Confidence 37888998776655321111 1111223557888999999887765432 11111 111222222221 1233
Q ss_pred CCCCccchHhhHHHHHh----hccCCceeeeeecccHHHHHHHHHHHHH
Q 036721 163 ISGASMNPARSIGPAIV----KHKFRGIWLYIIGPVIGTVTGGFAYNLI 207 (223)
Q Consensus 163 ~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 207 (223)
.| ---++..... .++|.....|.+..++++++++.+=..+
T Consensus 76 fT-----TFSTf~~E~~~l~~~~~~~~a~~y~~~sl~~gl~a~~lG~~l 119 (132)
T PRK14219 76 FT-----TFSTFSVETIQLINHSEWSIAFLYVSCSILGGLIMSGLGYTL 119 (132)
T ss_pred hh-----hHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 1112222222 2355566689999999998887654433
No 46
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=21.14 E-value=4.9e+02 Score=21.71 Aligned_cols=99 Identities=10% Similarity=0.126 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcccCc-----ccccc
Q 036721 33 VCVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLDVTP-----QAYFG 106 (223)
Q Consensus 33 ~~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-----~~~~~ 106 (223)
.++.+++++.+.+..-++. +| |-.+....++.||.++++.+--+.-=.+|=++|+.+.-.+..... .....
T Consensus 60 ~g~~F~~Gl~lIv~~g~eLfTg---n~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~ 136 (250)
T PF01226_consen 60 GGLVFPIGLVLIVFLGGELFTG---NMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGE 136 (250)
T ss_dssp HHHHHTHHHHHHHHHT---TTT---TCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHH
T ss_pred HHHHHHHHHHHHHHhcchhccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHH
Confidence 3556666666555554443 32 666566677889999998887776666666666665443322111 11100
Q ss_pred -------cCCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 107 -------TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 107 -------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
.--+.+..+.++-=.++.++..+.+...
T Consensus 137 ~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~ 171 (250)
T PF01226_consen 137 YLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLA 171 (250)
T ss_dssp HHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123366777777777888888777765
Done!