Query 036721
Match_columns 223
No_of_seqs 170 out of 1527
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:37:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 1.5E-52 5E-57 344.5 15.6 209 1-209 7-222 (223)
2 2o9g_A Aquaporin Z; integral m 100.0 4.1E-52 1.4E-56 344.4 16.6 209 1-210 8-232 (234)
3 3llq_A Aquaporin Z 2; aquapori 100.0 5.3E-52 1.8E-56 346.2 16.4 207 1-208 33-253 (256)
4 2w2e_A AQY1, aquaporin, aquapo 100.0 1.3E-51 4.5E-56 348.5 18.4 212 1-214 48-270 (279)
5 3iyz_A Aquaporin-4; water tran 100.0 1.1E-51 3.7E-56 354.2 18.2 211 1-211 55-272 (340)
6 2zz9_A Aquaporin-4; water tran 100.0 2.7E-51 9.3E-56 348.9 17.6 210 1-210 16-232 (301)
7 1j4n_A Aquaporin 1; membrane p 100.0 1.9E-51 6.6E-56 346.7 15.8 211 1-211 14-236 (271)
8 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 4E-51 1.4E-55 343.6 16.4 210 1-211 15-229 (266)
9 2b6o_A Aquaporin-0, lens fiber 100.0 1.9E-50 6.4E-55 339.4 18.6 210 1-211 13-226 (263)
10 2f2b_A Aquaporin AQPM; protein 100.0 2E-50 6.7E-55 336.8 17.6 209 1-209 8-245 (246)
11 3cn5_A Aquaporin; membrane pro 100.0 3.4E-51 1.2E-55 349.0 13.2 211 1-211 64-290 (304)
12 1ldf_A Glycerol uptake facilit 100.0 1E-50 3.6E-55 344.2 14.4 213 1-213 11-260 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 7.2E-51 2.5E-55 341.3 11.5 215 1-215 13-249 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.6 1.8E-16 6E-21 132.8 7.0 101 112-212 8-112 (263)
15 3llq_A Aquaporin Z 2; aquapori 99.6 1E-15 3.6E-20 127.3 4.9 99 111-209 27-132 (256)
16 2zz9_A Aquaporin-4; water tran 99.6 3.4E-15 1.2E-19 126.9 7.8 100 112-211 11-118 (301)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.6 1.2E-15 3.9E-20 128.0 4.5 99 112-210 10-112 (266)
18 3gd8_A Aquaporin-4; proton exc 99.6 1.9E-15 6.5E-20 123.7 4.5 99 113-211 3-109 (223)
19 2o9g_A Aquaporin Z; integral m 99.5 2.6E-15 9E-20 123.8 4.9 98 113-210 4-108 (234)
20 3c02_A Aquaglyceroporin; membr 99.5 2.5E-15 8.6E-20 125.6 4.7 100 112-211 8-113 (258)
21 1j4n_A Aquaporin 1; membrane p 99.5 2.9E-15 9.9E-20 126.0 4.5 99 112-210 9-120 (271)
22 3iyz_A Aquaporin-4; water tran 99.5 3.7E-15 1.3E-19 127.9 4.3 100 112-211 50-157 (340)
23 1ldf_A Glycerol uptake facilit 99.5 6.6E-15 2.2E-19 124.5 4.9 100 112-211 6-111 (281)
24 2f2b_A Aquaporin AQPM; protein 99.5 3.9E-14 1.3E-18 117.6 9.4 94 1-98 147-245 (246)
25 3cn5_A Aquaporin; membrane pro 99.5 5E-15 1.7E-19 126.1 3.9 100 112-211 59-167 (304)
26 2w2e_A AQY1, aquaporin, aquapo 99.5 1.1E-14 3.7E-19 122.8 5.4 100 112-211 43-155 (279)
27 3tds_E Formate/nitrite transpo 69.7 4.3 0.00015 33.4 4.0 99 33-134 67-177 (268)
28 4fc4_A Nitrite transporter NIR 67.6 5.9 0.0002 32.4 4.4 98 34-134 62-171 (261)
29 3s2u_A UDP-N-acetylglucosamine 58.1 2.5 8.6E-05 35.8 0.5 21 49-69 9-29 (365)
30 3kcu_A Probable formate transp 49.1 1.1E+02 0.0037 25.1 11.8 98 33-134 71-182 (285)
31 3s2u_A UDP-N-acetylglucosamine 28.7 8.4 0.00029 32.4 -1.0 22 161-182 9-30 (365)
32 3kly_A Putative formate transp 25.7 74 0.0025 26.0 4.3 98 33-134 70-181 (280)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-52 Score=344.54 Aligned_cols=209 Identities=28% Similarity=0.483 Sum_probs=180.6
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccc--c-CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKI--Y-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPL 77 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~--~-~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~ 77 (223)
+++||+||++|+++||++.+.... + +..++..++++||+++++.+++++++||||+|||||+++++.||++|++.+.
T Consensus 7 ~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~ 86 (223)
T 3gd8_A 7 VTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVF 86 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHHHHHH
Confidence 368999999999999998874321 1 2456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCccccc---ccCCCCCchhHHHHHHHHHHHHHHHhhheeccCCc-CCCchhHHHHHHH
Q 036721 78 YIVAQVVGSLLASGTLSLMLDVTPQAYF---GTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTI 153 (223)
Q Consensus 78 yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~---~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v 153 (223)
|+++|++|+++|+.+++.+++++..... .+.|+.+..++++.|+++||+|+++++...++++. .+...|+.+|+.+
T Consensus 87 Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~iGl~v 166 (223)
T 3gd8_A 87 YIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSV 166 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHHHHHHH
Confidence 9999999999999999998864322111 13345588899999999999999999987544433 2456899999999
Q ss_pred HHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhh
Q 036721 154 MLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKI 209 (223)
Q Consensus 154 ~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~ 209 (223)
...+...++.||+++||||||+||++.++|+++|+||++|++|+++++++|++++.
T Consensus 167 ~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 167 AIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 88777777899999999999999999999999999999999999999999999875
No 2
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=4.1e-52 Score=344.35 Aligned_cols=209 Identities=34% Similarity=0.619 Sum_probs=183.1
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcccc--CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIY--GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLY 78 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~--~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~y 78 (223)
+++||+||++|+++||++...+... +..+++.++++||+++++.+|+++++||||+|||||+++++.||++|++.+.|
T Consensus 8 ~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Y 87 (234)
T 2o9g_A 8 LAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGY 87 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHHHHHH
Confidence 4789999999999999988655422 24467788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccCcc-----------cccccCCCC-CchhHHHHHHHHHHHHHHHhhheeccCCcCCCchh
Q 036721 79 IVAQVVGSLLASGTLSLMLDVTPQ-----------AYFGTVPVG-SNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGG 146 (223)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~-----------~~~~~~~~~-s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~ 146 (223)
+++|++|+++|+.+++.++++.+. ....+.|.. +..++++.|+++|++|+++++.. .|+|..+...|
T Consensus 88 i~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~~~~~~~~p 166 (234)
T 2o9g_A 88 VIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGA-TDKFAPAGFAP 166 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-TSTTSCTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHh-cCCCCccchHH
Confidence 999999999999999998864321 122345643 78899999999999999999987 45555567899
Q ss_pred HHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhcc--CCceeeeeecccHHHHHHHHHHHHHhhc
Q 036721 147 VAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKHK--FRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 147 ~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~--~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
+.+|+.+....+..++.||+++||||||+||++.++ |+++|+||++|++|+++++++|++++.+
T Consensus 167 l~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 167 IAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999864 5699999999999999999999998764
No 3
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=5.3e-52 Score=346.18 Aligned_cols=207 Identities=31% Similarity=0.658 Sum_probs=180.8
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccc-c-CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKI-Y-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLY 78 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~-~-~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~y 78 (223)
+++||+||++|+++||++.+.+.. + ...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.|
T Consensus 33 ~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Y 112 (256)
T 3llq_A 33 LLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPY 112 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHHHHHHH
Confidence 479999999999999998764432 2 24567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccCcc---------cccccCCCC-CchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHH
Q 036721 79 IVAQVVGSLLASGTLSLMLDVTPQ---------AYFGTVPVG-SNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVA 148 (223)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~---------~~~~~~~~~-s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ 148 (223)
+++|++||++|+.+++.++++++. ....+.|.. +..++++.|+++|++|+++++.. .|+|+.+.+.|+.
T Consensus 113 iiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~-~d~~~~~~~~pl~ 191 (256)
T 3llq_A 113 VIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGS-THGRVPAGFAPIA 191 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-HSTTSCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCccchhHH
Confidence 999999999999999998753221 112345643 78899999999999999999986 5666556789999
Q ss_pred HHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc--cCCceeeeeecccHHHHHHHHHHHHHh
Q 036721 149 VGMTIMLNVFVAGPISGASMNPARSIGPAIVKH--KFRGIWLYIIGPVIGTVTGGFAYNLIK 208 (223)
Q Consensus 149 ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~--~~~~~~vy~~~p~~Ga~~a~~l~~~~~ 208 (223)
+|+.+....+..++.||+++|||||||||++.+ .|+++|+||++|++|+++|+++|+++.
T Consensus 192 IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 192 IGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999875 466899999999999999999999985
No 4
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.3e-51 Score=348.46 Aligned_cols=212 Identities=23% Similarity=0.395 Sum_probs=183.9
Q ss_pred ChhHHHHHHHHHHHHHhHhhh-ccc------c-CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccc
Q 036721 1 MIAELIGTYFIIFAGCGAVAV-DKI------Y-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKR 72 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~-~~~------~-~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~ 72 (223)
+++||+||++|+++|+++... +.. + +..+++.++++||+++++.+++++++||||+|||||+++++.|+++|
T Consensus 48 ~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 127 (279)
T 2w2e_A 48 MSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLARAIPP 127 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHcCCCCH
Confidence 378999999999999987432 211 1 12346678999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhcccCcccccccCCC--CCchhHHHHHHHHHHHHHHHhhheeccCCcCCCchhHHHH
Q 036721 73 RQVPLYIVAQVVGSLLASGTLSLMLDVTPQAYFGTVPV--GSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVG 150 (223)
Q Consensus 73 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~~~ig 150 (223)
++.+.|+++|++||++|+.+++.++++.. ...+.|. .+..+.++.|+++||+|+++++.+.+++++.+.+.|+.+|
T Consensus 128 ~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~--~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~~~~~pl~IG 205 (279)
T 2w2e_A 128 FRGILMAFTQIVAGMAAAGAASAMTPGEI--AFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFAPFVIG 205 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSSC--CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTTGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccc--eeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCcHHHHHH
Confidence 99999999999999999999999987543 2334453 4788999999999999999999876666555668999999
Q ss_pred HHHHHHHHHhcCCCCCccchHhhHHHHHhhccC-CceeeeeecccHHHHHHHHHHHHHhhccccc
Q 036721 151 MTIMLNVFVAGPISGASMNPARSIGPAIVKHKF-RGIWLYIIGPVIGTVTGGFAYNLIKIHRQAN 214 (223)
Q Consensus 151 ~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~-~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~ 214 (223)
+.+....+..++.||+++||||||||+++...| +++|+||++|++|+++|+++|+++...++++
T Consensus 206 l~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~ 270 (279)
T 2w2e_A 206 IALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQT 270 (279)
T ss_dssp HHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 999999999999999999999999999999755 5899999999999999999999998766554
No 5
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-51 Score=354.19 Aligned_cols=211 Identities=29% Similarity=0.508 Sum_probs=182.4
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcccc---CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIY---GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPL 77 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~---~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~ 77 (223)
+++||+||++|+|+||++.+..... ...+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.
T Consensus 55 ~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~ 134 (340)
T 3iyz_A 55 VTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVF 134 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHH
Confidence 4799999999999999998743211 1356778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCcccccc---cCCCCCchhHHHHHHHHHHHHHHHhhheeccCCc-CCCchhHHHHHHH
Q 036721 78 YIVAQVVGSLLASGTLSLMLDVTPQAYFG---TVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTI 153 (223)
Q Consensus 78 yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v 153 (223)
|+++|++||++|+.+++.++++......+ ..|..+..++++.|+++||+|+++++.+.++++. .....|+.||+.+
T Consensus 135 YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v 214 (340)
T 3iyz_A 135 YITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSV 214 (340)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHH
Confidence 99999999999999999988754322112 2344588899999999999999999997544432 2456899999999
Q ss_pred HHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 154 MLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 154 ~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
.+.+...++.||+++||||+|||+++.++|+++|+||++|++|+++|+++|++++.++
T Consensus 215 ~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 215 AIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred HHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 8888888899999999999999999999999999999999999999999999998654
No 6
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=2.7e-51 Score=348.86 Aligned_cols=210 Identities=30% Similarity=0.518 Sum_probs=181.0
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcccc---CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIY---GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPL 77 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~---~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~ 77 (223)
+++||+||++|+++++++.+..... ...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.
T Consensus 16 ~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~ 95 (301)
T 2zz9_A 16 VTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVF 95 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCHHHHHH
Confidence 4799999999999999987643321 1345778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCcccccc-cC--CCCCchhHHHHHHHHHHHHHHHhhheeccCCc-CCCchhHHHHHHH
Q 036721 78 YIVAQVVGSLLASGTLSLMLDVTPQAYFG-TV--PVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTI 153 (223)
Q Consensus 78 yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~-~~--~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v 153 (223)
|+++|++||++|+.+++.++++......+ +. +..+..++++.|+++||+|+++++.+.++++. .....|+.+|+.+
T Consensus 96 YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~~~pl~IGl~v 175 (301)
T 2zz9_A 96 YITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSV 175 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccchHhHHHHHHH
Confidence 99999999999999999998754322111 22 34478899999999999999999987544333 2457899999999
Q ss_pred HHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhc
Q 036721 154 MLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 154 ~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
.+.+...++.||+++||||+|||+++.+.|.++|+||++|++|+++|+++|++++.+
T Consensus 176 ~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 176 AIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 888888889999999999999999999999999999999999999999999998754
No 7
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.9e-51 Score=346.73 Aligned_cols=211 Identities=30% Similarity=0.535 Sum_probs=181.5
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcc-------ccC-CccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccc
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDK-------IYG-KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKR 72 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~-------~~~-~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~ 72 (223)
+++||+||++|+|+||++.+... ..+ ..+++.++++||+++++.+|+++++||||+|||||+++++.||++|
T Consensus 14 ~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 93 (271)
T 1j4n_A 14 VVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISV 93 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHcCCCCH
Confidence 47899999999999999876422 111 2346788999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhcccCcccccc---cCCCCCchhHHHHHHHHHHHHHHHhhheeccCCc-CCCchhHH
Q 036721 73 RQVPLYIVAQVVGSLLASGTLSLMLDVTPQAYFG---TVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVA 148 (223)
Q Consensus 73 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~~~ 148 (223)
++.+.|+++|++||++|+.+++.++++.+....+ +.|..+..++++.|+++|++|+++++...++++. .....|+.
T Consensus 94 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~~~~~~pl~ 173 (271)
T 1j4n_A 94 LRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLA 173 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSCCCCCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccCCCccccHHHH
Confidence 9999999999999999999999998644332222 3455678899999999999999999987433332 24678999
Q ss_pred HHHHHHHHHHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 149 VGMTIMLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 149 ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
+|+.+.+.+...++.||+++||||||||+++.++|+++|+||++|++|+++++++|++++.++
T Consensus 174 IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~ 236 (271)
T 1j4n_A 174 IGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPR 236 (271)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999888887889999999999999999999999999999999999999999999998654
No 8
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-51 Score=343.57 Aligned_cols=210 Identities=27% Similarity=0.491 Sum_probs=182.1
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccccCCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIYGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYIV 80 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (223)
+++||+||++|+|+++++.... .+...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.|++
T Consensus 15 ~laEfiGT~~lv~~g~g~~~~~-~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~ 93 (266)
T 3d9s_A 15 VFAEFLATLIFVFFGLGSALKW-PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVA 93 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCC-SSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHHHHHH
Confidence 4789999999999999988532 222356778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhcccCcccccc-cC--CCCCchhHHHHHHHHHHHHHHHhhheeccCCc-CCCchhHHHHHHHHHH
Q 036721 81 AQVVGSLLASGTLSLMLDVTPQAYFG-TV--PVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTIMLN 156 (223)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~~~-~~--~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v~~~ 156 (223)
+|++||++|+.+++.+++++.....+ +. +..+..++++.|+++||+|+++++.+.++++. .....|+.+|+.+.+.
T Consensus 94 AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~ 173 (266)
T 3d9s_A 94 AQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLG 173 (266)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHH
Confidence 99999999999999998653222222 22 34478899999999999999999987433332 2457899999999999
Q ss_pred HHHhcCCCCCccchHhhHHHHHhhccCCc-eeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 157 VFVAGPISGASMNPARSIGPAIVKHKFRG-IWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 157 ~~~~~~~sG~~lNPA~~l~~~~~~~~~~~-~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
++..+++||+++||||||||+++.++|++ +|+||++|++|+++|+++|++++.++
T Consensus 174 ~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 174 HLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp HHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999 99999999999999999999998654
No 9
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.9e-50 Score=339.38 Aligned_cols=210 Identities=30% Similarity=0.495 Sum_probs=183.1
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccccCCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIYGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYIV 80 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (223)
+++||+||++|+++++++.... ..+..+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.|++
T Consensus 13 ~laEfiGT~~Lv~~g~g~~~~~-~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~~Yi~ 91 (263)
T 2b6o_A 13 IFAEFFATLFYVFFGLGASLRW-APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVV 91 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCC-CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHHHHHH
Confidence 4789999999999999988532 222345677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhcccCcccccc---cCCCCCchhHHHHHHHHHHHHHHHhhheeccCC-cCCCchhHHHHHHHHHH
Q 036721 81 AQVVGSLLASGTLSLMLDVTPQAYFG---TVPVGSNAQSFVAEIIISFLLMFVISGAVTDDR-AIGQFGGVAVGMTIMLN 156 (223)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~-~~~~~~~~~ig~~v~~~ 156 (223)
+|++|+++|+.+++.+++++.....+ +.|+.+..++++.|+++||+|+++++.+.++++ ......|+.+|+.+...
T Consensus 92 AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~ 171 (263)
T 2b6o_A 92 AQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLG 171 (263)
T ss_dssp HHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHHHH
Confidence 99999999999999998754332222 335568899999999999999999998743332 23567899999999999
Q ss_pred HHHhcCCCCCccchHhhHHHHHhhccCCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 157 VFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 157 ~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
++..+++||+++||||||||+++.++|+++|+||++|++|+++++++|++++.++
T Consensus 172 ~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 172 HLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999999999999987643
No 10
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=2e-50 Score=336.82 Aligned_cols=209 Identities=35% Similarity=0.587 Sum_probs=180.4
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcc--cc----------C------CccchHHHHHHHHHHHHHHHHhcccccccccHHHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDK--IY----------G------KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTI 62 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~--~~----------~------~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTl 62 (223)
+++||+||++|+|+++++.+... .+ + ..+++.++++||+++++.+++++++||||+|||||+
T Consensus 8 ~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~NPAVTl 87 (246)
T 2f2b_A 8 CIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTI 87 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeCHHHHH
Confidence 47899999999999999876432 10 0 112344899999999999999999999999999999
Q ss_pred HHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcccCc---ccccccCC--CCCchhHHHHHHHHHHHHHHHhhheecc
Q 036721 63 ALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLDVTP---QAYFGTVP--VGSNAQSFVAEIIISFLLMFVISGAVTD 137 (223)
Q Consensus 63 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~--~~s~~~~~~~E~~~T~~l~~~~~~~~~~ 137 (223)
++++.||++|++.+.|+++|++|+++|+.+++.+++++. .....+.| ..+..+.++.|+++|++|+++++...+|
T Consensus 88 a~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~ 167 (246)
T 2f2b_A 88 GLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVD 167 (246)
T ss_dssp HHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEecC
Confidence 999999999999999999999999999999999987632 23344666 3488899999999999999999987666
Q ss_pred CCcCCCchhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHh--h----ccCCceeeeeecccHHHHHHHHHHHHHhh
Q 036721 138 DRAIGQFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIV--K----HKFRGIWLYIIGPVIGTVTGGFAYNLIKI 209 (223)
Q Consensus 138 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~--~----~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~ 209 (223)
++......|+.+|+.+...++..++.||+++|||||++|++. . ++|++.|+||++|++|+++++++|+.+.+
T Consensus 168 ~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 168 ERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp TTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 665567899999999999999999999999999999999993 2 37788889999999999999999998864
No 11
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=3.4e-51 Score=348.97 Aligned_cols=211 Identities=25% Similarity=0.483 Sum_probs=181.2
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccc----cCCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchh
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKI----YGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVP 76 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~----~~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~ 76 (223)
+++||+||++|+|++|++.+.... ....+++.++++||+++++++|+++++||||+|||||+++++.||++|++.+
T Consensus 64 ~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~ 143 (304)
T 3cn5_A 64 AIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRAL 143 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHH
Confidence 479999999999999998865321 1245677899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccCccccc--cc--CCCCCchhHHHHHHHHHHHHHHHhhheeccCCcC-CC----chhH
Q 036721 77 LYIVAQVVGSLLASGTLSLMLDVTPQAYF--GT--VPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAI-GQ----FGGV 147 (223)
Q Consensus 77 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~--~~--~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~-~~----~~~~ 147 (223)
.|+++|++||++|+.+++.++++..+... .+ .+..+..++++.|+++||+|+++++...++++.. +. +.|+
T Consensus 144 ~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl 223 (304)
T 3cn5_A 144 VYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPL 223 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHH
Confidence 99999999999999999999875321111 11 2344788999999999999999999764333322 22 7899
Q ss_pred HHHHHHHHHHHHhcCCCCCccchHhhHHHHHh---hccCCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 148 AVGMTIMLNVFVAGPISGASMNPARSIGPAIV---KHKFRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 148 ~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~---~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
.+|+.+.+..++.++.||+++||||||||+++ .+.|+++|+||++|++|+++|+++|++++.++
T Consensus 224 ~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 224 PIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999 66899999999999999999999999998754
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1e-50 Score=344.23 Aligned_cols=213 Identities=34% Similarity=0.535 Sum_probs=179.3
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcccc-CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIY-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYI 79 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~-~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi 79 (223)
+++||+||++|+++||++.+....+ +..+...++++||+++++.+++++++||||+|||||+++++.||++|++.+.|+
T Consensus 11 ~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi 90 (281)
T 1ldf_A 11 CIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFI 90 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHHHHHHH
Confidence 4789999999999999887543222 233445589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccCcc-------------------cccccCCC--CCchhHHHHHHHHHHHHHHHhhheeccC
Q 036721 80 VAQVVGSLLASGTLSLMLDVTPQ-------------------AYFGTVPV--GSNAQSFVAEIIISFLLMFVISGAVTDD 138 (223)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~-------------------~~~~~~~~--~s~~~~~~~E~~~T~~l~~~~~~~~~~~ 138 (223)
++|++||++|+.+++.++++... ..+.|.|. .+..++++.|+++||+|+++++.+.+++
T Consensus 91 ~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~ 170 (281)
T 1ldf_A 91 VSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDG 170 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999998864210 12335564 3788999999999999999999975433
Q ss_pred CcC--CCchhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-------cCC------ceeeeeecccHHHHHHHHH
Q 036721 139 RAI--GQFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-------KFR------GIWLYIIGPVIGTVTGGFA 203 (223)
Q Consensus 139 ~~~--~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-------~~~------~~~vy~~~p~~Ga~~a~~l 203 (223)
+.. +.+.|+.+|+.+....+..++.||+++|||||||||++.. .|+ ++|+||++|++|+++++++
T Consensus 171 ~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~ 250 (281)
T 1ldf_A 171 NGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFA 250 (281)
T ss_dssp SSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHH
Confidence 322 4578999999999999999999999999999999999861 222 7999999999999999999
Q ss_pred HHHHhhcccc
Q 036721 204 YNLIKIHRQA 213 (223)
Q Consensus 204 ~~~~~~~~~~ 213 (223)
|++++.++.+
T Consensus 251 y~~l~~~~~~ 260 (281)
T 1ldf_A 251 YRKLIGRHLP 260 (281)
T ss_dssp HHHHTGGGC-
T ss_pred HHHHhCccCC
Confidence 9999876544
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=7.2e-51 Score=341.35 Aligned_cols=215 Identities=26% Similarity=0.444 Sum_probs=179.2
Q ss_pred ChhHHHHHHHHHHHHHhHhhhcccc-CCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHhcCccccchhHHH
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIY-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAIFRQFKRRQVPLYI 79 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~-~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l~g~~~~~~~~~yi 79 (223)
+++||+||++|+++||++....... ...+++.++++||+++++.+++++++||||+|||||+++++.||++|++.+.|+
T Consensus 13 ~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi 92 (258)
T 3c02_A 13 FIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKKIPVYF 92 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHHHHHHH
Confidence 4789999999999999987643222 244677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccCccc-----cc---ccCCCCCchhHHHHHHHHHHHHHHHhhheeccCC--cCCCch-hHH
Q 036721 80 VAQVVGSLLASGTLSLMLDVTPQA-----YF---GTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDR--AIGQFG-GVA 148 (223)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~~-----~~---~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~--~~~~~~-~~~ 148 (223)
++|++|+++|+.+++.++++..+. .. +.....+..++++.|+++|++|+++++.+.++++ ..+.+. |+.
T Consensus 93 ~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~~~~pl~ 172 (258)
T 3c02_A 93 FAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSV 172 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHH
Confidence 999999999999999988642111 00 1111224456999999999999999998743332 234567 999
Q ss_pred HHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc------cC----CceeeeeecccHHHHHHHHHHHHHhhcccccc
Q 036721 149 VGMTIMLNVFVAGPISGASMNPARSIGPAIVKH------KF----RGIWLYIIGPVIGTVTGGFAYNLIKIHRQANQ 215 (223)
Q Consensus 149 ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~------~~----~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~~ 215 (223)
+|+.+....+..++.||+++||||||+|+++.. .| +++|+||++|++|+++++++|++++.++.+++
T Consensus 173 IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~~~~ 249 (258)
T 3c02_A 173 VGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLVDLA 249 (258)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHHHHC
T ss_pred HHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhcccCCCc
Confidence 999999999999999999999999999999872 34 67999999999999999999999998766543
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.64 E-value=1.8e-16 Score=132.85 Aligned_cols=101 Identities=21% Similarity=0.244 Sum_probs=86.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccCCc-CCC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCcee
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRGIW 187 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~~ 187 (223)
+..|.++.|+++|++|+++.+....+.+. ... ..++.+|+.+++.+++.+++||+|+|||++++.++.++ +|++.|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~ 87 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAI 87 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHH
Confidence 45789999999999999999887543221 112 24688999999999999999999999999999999987 899999
Q ss_pred eeeecccHHHHHHHHHHHHHhhccc
Q 036721 188 LYIIGPVIGTVTGGFAYNLIKIHRQ 212 (223)
Q Consensus 188 vy~~~p~~Ga~~a~~l~~~~~~~~~ 212 (223)
.|+++|++|+++|+.+.+.+++++.
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~~~ 112 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPPAV 112 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHccccc
Confidence 9999999999999999999987543
No 15
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=1e-15 Score=127.29 Aligned_cols=99 Identities=24% Similarity=0.338 Sum_probs=83.4
Q ss_pred CCchhHHHHHHHHHHHHHHHhhheec-cCC-c--CCC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cC
Q 036721 111 GSNAQSFVAEIIISFLLMFVISGAVT-DDR-A--IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KF 183 (223)
Q Consensus 111 ~s~~~~~~~E~~~T~~l~~~~~~~~~-~~~-~--~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 183 (223)
.+..|.+++|+++|++|++..++... .+. + ... ...+.+|+.+++.+++.+++||+|+|||++++.++.++ +|
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 106 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPA 106 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCH
Confidence 36789999999999999999887642 111 1 111 24588999999999999999999999999999999987 99
Q ss_pred CceeeeeecccHHHHHHHHHHHHHhh
Q 036721 184 RGIWLYIIGPVIGTVTGGFAYNLIKI 209 (223)
Q Consensus 184 ~~~~vy~~~p~~Ga~~a~~l~~~~~~ 209 (223)
++.+.|+++|++|+++|+.+.+.+++
T Consensus 107 ~~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 107 SSLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999998875
No 16
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.57 E-value=3.4e-15 Score=126.85 Aligned_cols=100 Identities=18% Similarity=0.284 Sum_probs=85.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccCC-c----CCC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cC
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDDR-A----IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KF 183 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~-~----~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 183 (223)
+.+|.+++|+++|++|++..++...... . ... ...+.+|+.+++.+++.+++||+|+|||++++..+.++ +|
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 90 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 90 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCH
Confidence 5689999999999999999887643211 1 111 24688999999999999999999999999999999987 99
Q ss_pred CceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 184 RGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 184 ~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
++...|+++|++|+++|+.+.+.+++++
T Consensus 91 ~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 91 AKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999988754
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.57 E-value=1.2e-15 Score=127.96 Aligned_cols=99 Identities=17% Similarity=0.290 Sum_probs=85.4
Q ss_pred CchhHHHHHHHHHHHHHHHhhheeccCCcC-CC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCcee
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTDDRAI-GQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRGIW 187 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~-~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~~ 187 (223)
+..|.+++|+++|++|++..++...+.... .. ..++.+|+.+++.+++.+++||+|+|||++++..+.++ +|++.+
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~ 89 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAF 89 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHH
Confidence 557899999999999999998875432211 11 24689999999999999999999999999999999987 899999
Q ss_pred eeeecccHHHHHHHHHHHHHhhc
Q 036721 188 LYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 188 vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
.|+++|++|+++|+.+.+.++++
T Consensus 90 ~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 90 FYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999998864
No 18
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.55 E-value=1.9e-15 Score=123.70 Aligned_cols=99 Identities=18% Similarity=0.297 Sum_probs=83.8
Q ss_pred chhHHHHHHHHHHHHHHHhhheecc--CCcC---CC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCC
Q 036721 113 NAQSFVAEIIISFLLMFVISGAVTD--DRAI---GQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFR 184 (223)
Q Consensus 113 ~~~~~~~E~~~T~~l~~~~~~~~~~--~~~~---~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 184 (223)
.+|.+++|+++|++|++..++...+ ++.+ .. ...+.+|+.+++.+++.+++||+|+|||++++..+.++ +|+
T Consensus 3 ~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (223)
T 3gd8_A 3 FWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 82 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHH
Confidence 4789999999999999998876432 1111 11 24578999999999999999999999999999999987 899
Q ss_pred ceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 185 GIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 185 ~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
+...|+++|++|+++++.+.+.+++++
T Consensus 83 ~~~~Yi~AQ~lGA~~ga~lv~~~~~~~ 109 (223)
T 3gd8_A 83 KSVFYIAAQCLGAIIGAGILYLVTPPS 109 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999999999999999999998887654
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.55 E-value=2.6e-15 Score=123.75 Aligned_cols=98 Identities=27% Similarity=0.290 Sum_probs=83.3
Q ss_pred chhHHHHHHHHHHHHHHHhhheeccCC-cC-C--C--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCc
Q 036721 113 NAQSFVAEIIISFLLMFVISGAVTDDR-AI-G--Q--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (223)
Q Consensus 113 ~~~~~~~E~~~T~~l~~~~~~~~~~~~-~~-~--~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 185 (223)
..|.+++|+++|++|++..++....++ .. . . ..++.+|+.+++.+++.+++||+|+|||++++..+.++ +|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 468999999999999999876532211 11 1 1 24588999999999999999999999999999999987 8999
Q ss_pred eeeeeecccHHHHHHHHHHHHHhhc
Q 036721 186 IWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 186 ~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
...|+++|++|+++|+.+.+.++++
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999988864
No 20
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.54 E-value=2.5e-15 Score=125.55 Aligned_cols=100 Identities=24% Similarity=0.428 Sum_probs=84.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhheecc---CCcCCCc--hhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTD---DRAIGQF--GGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~---~~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 185 (223)
+..|.+++|+++|++|++..++...+ .+..... ..+.+|+.+++.+++.+++||+|+|||++++..+.++ +|++
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 56789999999999999987765321 1111222 4678899999999999999999999999999999987 9999
Q ss_pred eeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 186 IWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 186 ~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
...|+++|++|+++|+.+.+.+++++
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 99999999999999999999988754
No 21
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.54 E-value=2.9e-15 Score=125.96 Aligned_cols=99 Identities=24% Similarity=0.364 Sum_probs=83.5
Q ss_pred CchhHHHHHHHHHHHHHHHhhheecc-------CCcCC---C--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHh
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTD-------DRAIG---Q--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIV 179 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~-------~~~~~---~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~ 179 (223)
+.+|.+++|+++|++|++..++.... ++..+ . ..++.+|+.+++.+++.+++||+|+|||++++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 46789999999999999988765321 11111 1 246899999999999999999999999999999999
Q ss_pred hc-cCCceeeeeecccHHHHHHHHHHHHHhhc
Q 036721 180 KH-KFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (223)
Q Consensus 180 ~~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 210 (223)
++ +|++...|+++|++|+++|+.+.+.++++
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 87 89999999999999999999999988754
No 22
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.53 E-value=3.7e-15 Score=127.92 Aligned_cols=100 Identities=18% Similarity=0.300 Sum_probs=84.3
Q ss_pred CchhHHHHHHHHHHHHHHHhhheecc--CCcC---CC--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cC
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTD--DRAI---GQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KF 183 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~--~~~~---~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 183 (223)
+.+|.+++|+++|++|+++.++.+.. +... .. ...+.+|+.+++.+++.+++||+|+|||++++.++.++ +|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 45789999999999999998876432 1111 11 24688999999999999999999999999999999987 89
Q ss_pred CceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 184 RGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 184 ~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
.+...|+++|++|+++|+.+.+.+++++
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999998887654
No 23
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.51 E-value=6.6e-15 Score=124.47 Aligned_cols=100 Identities=22% Similarity=0.313 Sum_probs=84.6
Q ss_pred CchhHHHHHHHHHHHHHHHhhheec----cCCcCCC-chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-cCCc
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVT----DDRAIGQ-FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~----~~~~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 185 (223)
+..|.+++|+++|++|++..++... ++...+. ..++.+|+.+++.+++.+++||+|+|||++++..+.++ +|++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 5678999999999999998776432 1111111 25688999999999999999999999999999999987 9999
Q ss_pred eeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 186 IWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 186 ~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
...|+++|++|+++|+.+.+.+++++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999888654
No 24
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.51 E-value=3.9e-14 Score=117.60 Aligned_cols=94 Identities=26% Similarity=0.382 Sum_probs=76.7
Q ss_pred ChhHHHHHHHHHHHHHhHhhhccccCCccchHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHH-----hcCccccch
Q 036721 1 MIAELIGTYFIIFAGCGAVAVDKIYGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPAVTIALAI-----FRQFKRRQV 75 (223)
Q Consensus 1 ~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~vSGah~NPavTla~~l-----~g~~~~~~~ 75 (223)
++.|+++|++|++..++....++.+ ....++.+|+.+....+..+++||+|+|||+|++..+ .++..|.+.
T Consensus 147 ~~~E~i~Tf~Lv~~i~~~~~~~~~~----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~ 222 (246)
T 2f2b_A 147 MLAEVVGTFLLMITIMGIAVDERAP----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYY 222 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTSC----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGT
T ss_pred HHHHHHHHHHHHheeeEEecCCCCC----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceE
Confidence 3689999999999887764322211 1124788899999999999999999999999999888 346678889
Q ss_pred hHHHHHHHHHHHHHhhhhhhhcc
Q 036721 76 PLYIVAQVVGSLLASGTLSLMLD 98 (223)
Q Consensus 76 ~~yi~aQ~~Ga~~g~~~~~~~~~ 98 (223)
+.|+++|++|+++|+.+.+.+.+
T Consensus 223 ~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 223 SIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeeeHHHHHHHHHHHHHHHHcC
Confidence 99999999999999988877653
No 25
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.51 E-value=5e-15 Score=126.06 Aligned_cols=100 Identities=22% Similarity=0.338 Sum_probs=84.6
Q ss_pred CchhHHHHHHHHHHHHHHHhhheecc---CCc-CC--C--chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHhhc-c
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAVTD---DRA-IG--Q--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-K 182 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~---~~~-~~--~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~ 182 (223)
+..|.+++|+++|++|++..++.... .+. .. . ...+.+|+.+++.+++.+++||+|+|||++++..+.++ +
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 56789999999999999998765321 111 11 1 24588999999999999999999999999999999987 8
Q ss_pred CCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 183 FRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 183 ~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
|++...|+++|++|+++|+.+.+.+++++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999988754
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.50 E-value=1.1e-14 Score=122.77 Aligned_cols=100 Identities=14% Similarity=0.210 Sum_probs=83.0
Q ss_pred CchhHHHHHHHHHHHHHHHhhhee---ccCC----cCCC-----chhHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHh
Q 036721 112 SNAQSFVAEIIISFLLMFVISGAV---TDDR----AIGQ-----FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIV 179 (223)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~---~~~~----~~~~-----~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~ 179 (223)
+.+|.+++|+++|++|++..++.+ .... .... ..++.+|+.+++.+++.+++||+|+|||++++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 556788999999999999876642 1111 1111 245889999999999999999999999999999999
Q ss_pred hc-cCCceeeeeecccHHHHHHHHHHHHHhhcc
Q 036721 180 KH-KFRGIWLYIIGPVIGTVTGGFAYNLIKIHR 211 (223)
Q Consensus 180 ~~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 211 (223)
++ +|++...|+++|++|+++|+.+.+.+++.+
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 87 899999999999999999999999988654
No 27
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=69.72 E-value=4.3 Score=33.37 Aligned_cols=99 Identities=13% Similarity=0.158 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcccC----cccccc-
Q 036721 33 VCVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLDVT----PQAYFG- 106 (223)
Q Consensus 33 ~~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~- 106 (223)
-++.+.+++.+.+..-++. +| |-.......+.||.++++.+--+.-=.+|=++|+.+.-.+.... +.....
T Consensus 67 ~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~~~ 143 (268)
T 3tds_E 67 MGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVAEF 143 (268)
T ss_dssp HHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHHHH
Confidence 3555555555555553333 33 44433345688999998887777666666666666544332211 111100
Q ss_pred ------cCCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 107 ------TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 107 ------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
.--+.+..+.++-=.++.++..+.+...
T Consensus 144 ~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 177 (268)
T 3tds_E 144 FANTAASKASMPFTALFFRGILCNILVCVSVLCS 177 (268)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012355666777777777777777654
No 28
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=67.65 E-value=5.9 Score=32.39 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhccc-----Ccc--ccc
Q 036721 34 CVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLDV-----TPQ--AYF 105 (223)
Q Consensus 34 ~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~-----~~~--~~~ 105 (223)
++.+.+++.+.+..-+.. +| |-.......+.||.++++.+--+.-=.+|=++|+.+.-.+... .+. ...
T Consensus 62 g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~~~ 138 (261)
T 4fc4_A 62 GATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (261)
T ss_dssp HHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTSHH
T ss_pred HHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHHHH
Confidence 455555555554443332 33 4443334456789998888877766666666665544332211 010 000
Q ss_pred -c---cCCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 106 -G---TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 106 -~---~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
. .--+.+..+.++-=.++.++..+.+...
T Consensus 139 ~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 139 HSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0011245566666666777777766654
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=58.09 E-value=2.5 Score=35.80 Aligned_cols=21 Identities=29% Similarity=0.302 Sum_probs=17.4
Q ss_pred cccccccccHHHHHHHHHhcC
Q 036721 49 AHISGAHFNPAVTIALAIFRQ 69 (223)
Q Consensus 49 ~~vSGah~NPavTla~~l~g~ 69 (223)
+.-||||++|+++++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 345789999999999998754
No 30
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=49.11 E-value=1.1e+02 Score=25.08 Aligned_cols=98 Identities=7% Similarity=0.043 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcc--c----Cccccc
Q 036721 33 VCVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLD--V----TPQAYF 105 (223)
Q Consensus 33 ~~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~----~~~~~~ 105 (223)
-++.+.+++.+.+..-+.. +| |--.+ ...+.||.++++.+--+.-=.+|=++|+.+.-.+.. . .+....
T Consensus 71 ~g~~F~vGL~lVvl~G~ELFTg---n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~ 146 (285)
T 3kcu_A 71 GGICFSLGLILCVVCGADLFTS---TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWG 146 (285)
T ss_dssp HHHHHTHHHHHHHHHTCCCTTT---THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHH
T ss_pred HHHHHHHHHHHHHHhCcccccc---chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHH
Confidence 3566666666666665554 54 42233 345688999887766555555555555554333211 1 111010
Q ss_pred c-------cCCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 106 G-------TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 106 ~-------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
. .--+.+..+.++-=.++.++..+.+...
T Consensus 147 ~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 147 LNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1122366777777777788877777664
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=28.68 E-value=8.4 Score=32.45 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=17.6
Q ss_pred cCCCCCccchHhhHHHHHhhcc
Q 036721 161 GPISGASMNPARSIGPAIVKHK 182 (223)
Q Consensus 161 ~~~sG~~lNPA~~l~~~~~~~~ 182 (223)
++=||+|++||.+++..+....
T Consensus 9 ~GGTgGHi~palala~~L~~~g 30 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQARG 30 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHHHHHHhCC
Confidence 3348899999999999887643
No 32
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=25.71 E-value=74 Score=26.02 Aligned_cols=98 Identities=8% Similarity=0.048 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHhccc-ccccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHhhhhhhhcc-----c-Cccccc
Q 036721 33 VCVTWGLIVMVMIYSLAHI-SGAHFNPAVTIALAIFRQFKRRQVPLYIVAQVVGSLLASGTLSLMLD-----V-TPQAYF 105 (223)
Q Consensus 33 ~~~~~g~~v~~~i~~~~~v-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~-----~-~~~~~~ 105 (223)
-++.+.+++.+.+..-+.. +|--+- + ...+.||.++++.+--+.-=.+|=++|+.+.-.+.. . ++....
T Consensus 70 ~g~~F~vGL~lVvl~g~ELFTgn~l~---~-~~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~ 145 (280)
T 3kly_A 70 GGLAFSLGLILVVITGGELFTSSVLI---L-VAKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLG 145 (280)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTTCCC---C-SSSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHH
T ss_pred HHHHHHHHHHHHHHccccccccchHH---H-HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHH
Confidence 3566666666666665554 554332 2 235678999998887777666676666665443321 0 111010
Q ss_pred c-------cCCCCCchhHHHHHHHHHHHHHHHhhhe
Q 036721 106 G-------TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (223)
Q Consensus 106 ~-------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (223)
. .--+.+..+.++-=.++.++..+.+...
T Consensus 146 ~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 146 LNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1122366777777777788877777664
Done!