BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036723
(290 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1
Length = 226
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 104/261 (39%), Gaps = 58/261 (22%)
Query: 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAI 77
+ FDLD+ +YP + + + I + KL I + L Y+ YG + GL +
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 78 GYQFDCDDFHSYVHGRLPY-MMLKPDPVLRNLLLSL--PIRKVIFTNADKTHAARVLSRL 134
++ D D+ V LP ++K D VLR +LL L + IFTNA HA RVL L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 135 GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVV 194
G+EDCF+ I YC DL +
Sbjct: 127 GIEDCFDGIT---------------------------------YCDYNAKDL-------I 146
Query: 195 CKPFEEAFEQVFKIANINPR-KTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVD---- 249
KP E +E+V + A + + K IF DDS N+ + G W T E D
Sbjct: 147 AKPMPEMYERVMREAGVTDKDKCIFVDDSYGNILGAREFG----WKYTVQLVEHGDPLPQ 202
Query: 250 -----YALESIHNIKEALPEL 265
+ + IH K L E+
Sbjct: 203 PQAGSHVIRDIHKFKHLLDEI 223
>sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1
Length = 280
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 102/232 (43%), Gaps = 47/232 (20%)
Query: 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL 71
N FD+D+ +Y ++ + + ++I + L + L S YK YG +
Sbjct: 52 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAI 111
Query: 72 AGLRAIGYQFDCDDFHSYVHGRLPYM-MLKPDPVLRNLLLSL----PIRKV-IFTNADKT 125
GL + ++ + +++ V LP +LKPD LRN+LL L I K+ +FTNA K
Sbjct: 112 RGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKN 170
Query: 126 HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185
HA R L LG+ D LFD YC D
Sbjct: 171 HAIRCLRLLGIAD---------------------------------LFDGLTYCDYSRTD 197
Query: 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFF-DDSIRNLETGKRLGLHT 236
+VCKP +AFE+ K + + + +F DDS +N+ETG +LG+ T
Sbjct: 198 ------TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKT 243
>sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1
Length = 321
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 17 CLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA 76
FD+D+T+Y ++ + + +++ + +L ++ + L S Y+ YG ++ GL
Sbjct: 54 VFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIK 113
Query: 77 IGYQFDCDDFHSYVHGRLPYM-MLKPDPVLRNLLLSLPIRKV-------IFTNADKTHAA 128
D +++++ LP LKPD LR LL++L +K+ +FTN+ K HA
Sbjct: 114 NKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAI 173
Query: 129 RVLSRLGLEDCFERI 143
R + LG+ D F+ I
Sbjct: 174 RCVKILGIADLFDGI 188
>sp|Q6JQN1|ACD10_HUMAN Acyl-CoA dehydrogenase family member 10 OS=Homo sapiens GN=ACAD10
PE=2 SV=1
Length = 1059
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
+CKP ++ + + P ++IF DD NL+ RLG+HT+ V
Sbjct: 186 ICKPDPRIYKLCLEQLGLQPSESIFLDDLGTNLKEAARLGIHTIKV 231
>sp|Q8K370|ACD10_MOUSE Acyl-CoA dehydrogenase family member 10 OS=Mus musculus GN=Acad10
PE=2 SV=1
Length = 1069
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
+CKP F+ + ++ P + IF DD NL+ LG+HT+ V
Sbjct: 186 ICKPDPRIFQLCLQRLSLQPSEAIFLDDLGSNLKVAASLGIHTIKV 231
>sp|O14165|YDX1_SCHPO Uncharacterized protein C4C5.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4C5.01 PE=3 SV=2
Length = 249
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 191 TPVVCKPFEEAFEQVFKIAN----------INPRKTIFFDDSIRNLETGKRLGLHTVWVG 240
P KPF + + +V + N + P + I F+DSI +++ K G+H +WV
Sbjct: 148 APGRGKPFPDIWLKVLNLINESRKQRGLKALTPSQCIAFEDSIPGVKSAKAAGMHVIWVP 207
Query: 241 TSHRAEGVDYALESIHNIK-EALPELWE 267
+ V L I + + E LP L E
Sbjct: 208 DAAIKNLVGDQLNEIVDSQCETLPSLSE 235
>sp|P53829|CAF40_YEAST Protein CAF40 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=CAF40 PE=1 SV=1
Length = 373
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 10 VSNQKYDCLLFDLDDTIYPLTSGL---SKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKF 66
V N D + F L I PL + S E++K + ++LQK+ +++ + +C +L +F
Sbjct: 231 VKNDSQDVITFLLRTDIVPLCLRIMESSSELSKTVAIFILQKILLDDVGLQYICATLERF 290
Query: 67 YGTT 70
Y T
Sbjct: 291 YAVT 294
>sp|P0A8Y4|YIHX_SHIFL Alpha-D-glucose-1-phosphate phosphatase YihX OS=Shigella flexneri
GN=yihX PE=3 SV=1
Length = 199
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
KP ++ V + +P T+FFDD+ N+E +LG+ ++ V
Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>sp|P0A8Y3|YIHX_ECOLI Alpha-D-glucose-1-phosphate phosphatase YihX OS=Escherichia coli
(strain K12) GN=yihX PE=1 SV=1
Length = 199
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239
KP ++ V + +P T+FFDD+ N+E +LG+ ++ V
Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>sp|C0R5A2|DEF_WOLWR Peptide deformylase OS=Wolbachia sp. subsp. Drosophila simulans
(strain wRi) GN=def PE=3 SV=1
Length = 179
Score = 35.0 bits (79), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 192 PVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYA 251
P+V P E + ++ +IN + +D + + LGL V VG R VD
Sbjct: 5 PIVIAPDERLITRASEVTDINDKIKELVNDMFETMYDAEGLGLAAVQVGVLKRIFVVDVQ 64
Query: 252 LESIHN 257
LE+I N
Sbjct: 65 LETIEN 70
>sp|Q9P6Q2|ENOPH_SCHPO Enolase-phosphatase E1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=utr4 PE=3 SV=1
Length = 216
Score = 34.7 bits (78), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 208 IANINPRKTIFFDDSIRNLETGKRLGLHT 236
+ N NPR+ +F D+I L+ +++GLHT
Sbjct: 159 VGNSNPREWLFLSDNINELKAARKVGLHT 187
>sp|Q73IJ6|DEF_WOLPM Peptide deformylase OS=Wolbachia pipientis wMel GN=def PE=3 SV=1
Length = 179
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 192 PVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYA 251
P+V P E + ++ +IN + +D + + LGL V VG R +D
Sbjct: 5 PIVIAPDERLITRASEVTDINDKIKELVNDMFETMYDAEGLGLAAVQVGVLKRIFVMDIQ 64
Query: 252 LESIHN 257
LE+I N
Sbjct: 65 LETIEN 70
>sp|Q5F7W4|GPH_NEIG1 Phosphoglycolate phosphatase OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=NGO1052 PE=3 SV=1
Length = 236
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 108 LLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETL 149
LL SL I VI TN ++ AA +L +LGL D F I+ ++L
Sbjct: 107 LLKSLGIPLVIITNKNEILAAELLKQLGLADYFSLILGGDSL 148
>sp|Q86ZR7|YKD3A_YEAST Putative uncharacterized hydrolase YKL033W-A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKL033W-A
PE=1 SV=2
Length = 236
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 196 KPFEEAFEQVFKIAN------INPRKTIFFDDSIRNLETGKRLGLHTVWV 239
KPF + ++ K N I P + I F+D I +++ K G H +WV
Sbjct: 151 KPFPDIWQLGLKELNEKFHTDIKPDECIVFEDGIPGVKSAKAFGAHVIWV 200
>sp|Q58035|Y618_METJA UPF0235 protein MJ0618 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0618 PE=3 SV=1
Length = 98
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 157 VLVDQDASESERPTELFDIDDYCSRPNADLELPRT-----PVVCKPFEEAFEQVFKI--A 209
VL+D D + + E+ I+++ R + ++ P T + K F+E F++ +I
Sbjct: 13 VLIDIDVQANAKKNEIVGINEWRKRLSIKIKAPATEGKANKEIIKFFKEIFKKDVEIVSG 72
Query: 210 NINPRKTIFFDD 221
+NP+KT+ D
Sbjct: 73 KLNPQKTVLIGD 84
>sp|O94672|SC232_SCHPO Protein transport protein sec23-2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec232 PE=1 SV=1
Length = 765
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 66 FYGTTLAGLRAIGYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLS-LPIRKVIFTNADK 124
F+G+T+A R GYQ + YV+ L ++L P + LL PI + I +
Sbjct: 659 FHGSTIAQWRNAGYQ----EQPEYVN--LKELLLAPRLEVTELLADRFPIPRFIVCDQGG 712
Query: 125 THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160
+ A +LSR+ F + F + S D TVL D
Sbjct: 713 SQARFLLSRINPSVSFNKSSQFSPM-SKDSETVLTD 747
>sp|Q5L5F9|BIOB_CHLAB Biotin synthase OS=Chlamydophila abortus (strain S26/3) GN=bioB
PE=3 SV=1
Length = 331
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 14/79 (17%)
Query: 211 INPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNI--KEALPE---- 264
I RK ++D +R L+ ++ GLH G E V+ +E +HN+ +E +PE
Sbjct: 167 ITTRK---YEDRLRTLDIVEKSGLHVCCGGIIGMGETVEDRVELLHNLARRERMPESVPV 223
Query: 265 --LWEVAGE---NSESISY 278
LW + G + SIS+
Sbjct: 224 NVLWPIKGTPLYDQASISF 242
>sp|O59760|YJM7_SCHPO Putative uncharacterized hydrolase C1020.07 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1020.07 PE=3 SV=1
Length = 236
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 189 PRTPV-VCKPFEEAFEQVFKIAN----------INPRKTIFFDDSIRNLETGKRLGLHTV 237
PR PV KP + + K+ N I P + F+DSI +++G+ G+ V
Sbjct: 140 PRLPVGRGKPHPDIWFIALKMINDKRKAQGQAEILPENCLVFEDSITGVQSGRAAGMKVV 199
Query: 238 WV 239
WV
Sbjct: 200 WV 201
>sp|O26278|ATGT_METTH tRNA-guanine(15) transglycosylase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=tgtA PE=3 SV=2
Length = 653
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 91 HG--RLPYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFET 148
HG R P +M P + + + P +++ TNA + L L D R+I F+
Sbjct: 27 HGTVRTPALMPVIHPGKQTIDVKGPGAEIVITNAYIIYRNPELRERALSDGVHRLIDFDG 86
Query: 149 LNSTDKGTVLVDQDAS-ESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFK 207
TD G+ + + E E P + D+ + L++P P V A E+V
Sbjct: 87 PIMTDSGSFQLSEYGDIEVENPEIIRFQDEIGTDIGTSLDIPTPPGVSH--RRAIEEV-- 142
Query: 208 IANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243
+ + + ++E +R+ L+ V G++H
Sbjct: 143 --------EVTLERARESIEYRERMMLNAVVQGSTH 170
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,867,483
Number of Sequences: 539616
Number of extensions: 4507656
Number of successful extensions: 10839
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 10821
Number of HSP's gapped (non-prelim): 25
length of query: 290
length of database: 191,569,459
effective HSP length: 116
effective length of query: 174
effective length of database: 128,974,003
effective search space: 22441476522
effective search space used: 22441476522
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)