Query 036723
Match_columns 290
No_of_seqs 139 out of 1355
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 04:51:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036723.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036723hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 2.9E-34 6.2E-39 237.3 19.5 232 1-269 1-234 (244)
2 TIGR01993 Pyr-5-nucltdase pyri 100.0 4.7E-27 1E-31 197.0 19.1 184 16-239 1-184 (184)
3 PRK13288 pyrophosphatase PpaX; 100.0 4.1E-27 8.9E-32 202.0 17.8 199 13-263 1-211 (214)
4 COG0546 Gph Predicted phosphat 99.9 1.2E-26 2.6E-31 200.2 18.0 200 12-263 1-218 (220)
5 PLN02770 haloacid dehalogenase 99.9 1.8E-26 4E-31 202.6 16.2 194 12-258 19-231 (248)
6 PRK13478 phosphonoacetaldehyde 99.9 7.3E-26 1.6E-30 200.9 19.6 202 12-267 1-259 (267)
7 PRK13226 phosphoglycolate phos 99.9 2.5E-26 5.5E-31 199.3 16.2 198 13-263 10-225 (229)
8 TIGR03351 PhnX-like phosphonat 99.9 9.7E-26 2.1E-30 194.2 18.9 195 15-262 1-219 (220)
9 TIGR01422 phosphonatase phosph 99.9 9.4E-26 2E-30 198.5 17.8 123 97-262 96-252 (253)
10 PRK10563 6-phosphogluconate ph 99.9 6.8E-26 1.5E-30 195.3 16.1 195 13-260 2-210 (221)
11 PRK10826 2-deoxyglucose-6-phos 99.9 6.7E-26 1.5E-30 195.6 15.5 196 12-260 4-217 (222)
12 TIGR02253 CTE7 HAD superfamily 99.9 1.9E-25 4.1E-30 192.3 17.3 198 15-258 2-220 (221)
13 PRK13225 phosphoglycolate phos 99.9 3.6E-25 7.9E-30 196.5 18.8 204 7-267 54-272 (273)
14 PRK11587 putative phosphatase; 99.9 1.8E-25 3.9E-30 192.5 16.0 192 13-259 1-204 (218)
15 TIGR01449 PGP_bact 2-phosphogl 99.9 2.5E-25 5.4E-30 190.4 16.6 191 18-261 1-212 (213)
16 TIGR01454 AHBA_synth_RP 3-amin 99.9 5.4E-25 1.2E-29 187.7 17.2 193 18-263 1-204 (205)
17 PLN03243 haloacid dehalogenase 99.9 4.2E-25 9E-30 194.9 17.0 205 13-269 22-241 (260)
18 PRK09449 dUMP phosphatase; Pro 99.9 2.5E-24 5.5E-29 185.8 19.2 122 98-262 93-222 (224)
19 PRK14988 GMP/IMP nucleotidase; 99.9 2.2E-24 4.7E-29 186.6 18.2 202 14-265 9-221 (224)
20 PRK13222 phosphoglycolate phos 99.9 1.3E-24 2.8E-29 187.6 16.4 199 13-264 4-223 (226)
21 TIGR02254 YjjG/YfnB HAD superf 99.9 3.6E-24 7.9E-29 184.4 19.1 199 15-262 1-224 (224)
22 PLN02575 haloacid dehalogenase 99.9 3.4E-24 7.3E-29 196.3 19.3 202 14-268 130-348 (381)
23 PRK13223 phosphoglycolate phos 99.9 4.7E-24 1E-28 189.7 18.1 199 13-263 11-230 (272)
24 PRK10725 fructose-1-P/6-phosph 99.9 7.3E-24 1.6E-28 178.0 15.5 174 12-240 2-186 (188)
25 COG1011 Predicted hydrolase (H 99.9 3.9E-24 8.5E-29 184.8 14.2 124 98-264 97-228 (229)
26 COG0637 Predicted phosphatase/ 99.9 1.1E-23 2.3E-28 181.8 14.8 178 14-244 1-190 (221)
27 PLN02940 riboflavin kinase 99.9 1.5E-23 3.3E-28 194.5 16.2 194 14-260 10-218 (382)
28 PRK10748 flavin mononucleotide 99.9 5.5E-23 1.2E-27 179.4 18.3 117 98-262 111-238 (238)
29 PRK06698 bifunctional 5'-methy 99.9 3.7E-23 8.1E-28 196.8 15.8 204 12-265 238-456 (459)
30 TIGR01428 HAD_type_II 2-haloal 99.9 3.9E-22 8.4E-27 169.1 17.8 104 97-243 89-195 (198)
31 PLN02779 haloacid dehalogenase 99.9 2.1E-22 4.5E-27 180.3 16.3 119 98-260 142-270 (286)
32 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 2.5E-22 5.3E-27 168.1 14.8 170 15-239 1-185 (185)
33 TIGR02252 DREG-2 REG-2-like, H 99.9 1E-21 2.2E-26 167.1 17.2 173 16-238 1-203 (203)
34 TIGR01990 bPGM beta-phosphoglu 99.9 2.4E-22 5.2E-27 168.1 11.8 169 17-240 1-185 (185)
35 PF13419 HAD_2: Haloacid dehal 99.9 7.1E-23 1.5E-27 168.5 6.8 168 18-239 1-176 (176)
36 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 5.3E-22 1.1E-26 165.4 8.0 97 99-239 84-183 (183)
37 PHA02597 30.2 hypothetical pro 99.9 3.7E-21 8.1E-26 162.9 12.8 181 14-260 1-196 (197)
38 PLN02919 haloacid dehalogenase 99.9 9.5E-21 2.1E-25 194.9 18.1 204 13-271 73-296 (1057)
39 TIGR02247 HAD-1A3-hyp Epoxide 99.8 8E-21 1.7E-25 162.6 12.5 102 98-242 92-198 (211)
40 PRK09456 ?-D-glucose-1-phospha 99.8 9.8E-20 2.1E-24 154.6 16.4 119 78-243 66-188 (199)
41 TIGR00338 serB phosphoserine p 99.8 4E-20 8.8E-25 159.0 13.7 131 98-261 83-218 (219)
42 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 1.9E-19 4E-24 152.6 14.6 88 101-232 107-197 (197)
43 PLN02811 hydrolase 99.8 1.1E-19 2.3E-24 156.8 10.9 185 22-260 1-208 (220)
44 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 8.4E-20 1.8E-24 151.6 9.1 89 97-232 87-175 (175)
45 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 9E-19 2E-23 142.4 12.6 151 17-233 1-154 (154)
46 PRK08942 D,D-heptose 1,7-bisph 99.8 1E-18 2.2E-23 146.3 12.2 125 99-263 28-177 (181)
47 KOG3085 Predicted hydrolase (H 99.8 2E-18 4.3E-23 147.9 13.3 184 11-244 3-217 (237)
48 PLN02954 phosphoserine phospha 99.8 9E-18 1.9E-22 144.9 16.4 201 13-262 10-223 (224)
49 PRK06769 hypothetical protein; 99.8 1.9E-18 4.2E-23 143.6 11.0 121 99-262 27-171 (173)
50 TIGR00213 GmhB_yaeD D,D-heptos 99.8 3.5E-18 7.6E-23 142.4 12.3 128 99-260 25-176 (176)
51 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 1.5E-17 3.4E-22 140.7 14.6 114 97-243 77-193 (201)
52 PRK13582 thrH phosphoserine ph 99.8 1.3E-17 2.9E-22 141.8 13.0 195 15-268 1-201 (205)
53 KOG2914 Predicted haloacid-hal 99.7 3.3E-17 7.1E-22 139.9 13.6 195 11-258 6-218 (222)
54 PRK11133 serB phosphoserine ph 99.7 4.4E-17 9.6E-22 147.6 15.0 132 98-262 179-315 (322)
55 PRK09552 mtnX 2-hydroxy-3-keto 99.7 1.3E-17 2.7E-22 143.8 10.9 127 97-268 71-218 (219)
56 TIGR01656 Histidinol-ppas hist 99.7 6E-18 1.3E-22 136.9 7.4 99 100-242 27-147 (147)
57 TIGR01691 enolase-ppase 2,3-di 99.7 1.7E-16 3.6E-21 136.5 16.2 177 15-244 1-200 (220)
58 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.7 1.6E-17 3.5E-22 146.6 7.7 69 194-262 177-254 (257)
59 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 1.4E-16 3E-21 126.4 11.7 94 100-240 25-131 (132)
60 TIGR01672 AphA HAD superfamily 99.7 5.5E-16 1.2E-20 134.4 14.1 98 97-244 111-215 (237)
61 TIGR01685 MDP-1 magnesium-depe 99.7 9.8E-17 2.1E-21 132.7 8.8 104 97-243 42-160 (174)
62 COG0647 NagD Predicted sugar p 99.7 7E-17 1.5E-21 141.7 8.1 232 10-264 3-267 (269)
63 TIGR01261 hisB_Nterm histidino 99.7 2.7E-16 5.8E-21 129.0 8.8 101 99-244 28-151 (161)
64 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.6 1.3E-15 2.8E-20 133.9 10.7 88 171-258 153-249 (249)
65 TIGR02137 HSK-PSP phosphoserin 99.6 4.3E-15 9.2E-20 126.5 12.5 193 16-265 2-198 (203)
66 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 1.9E-15 4.2E-20 124.6 9.8 94 101-239 43-161 (166)
67 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 1E-14 2.3E-19 121.9 14.2 111 99-235 71-184 (188)
68 PRK10444 UMP phosphatase; Prov 99.6 2.3E-15 5E-20 132.0 10.5 87 172-258 150-245 (248)
69 cd01427 HAD_like Haloacid deha 99.6 2E-15 4.3E-20 118.5 9.1 116 97-239 21-139 (139)
70 TIGR01452 PGP_euk phosphoglyco 99.6 9.6E-16 2.1E-20 136.9 6.7 65 194-258 200-279 (279)
71 PLN02645 phosphoglycolate phos 99.6 7.4E-16 1.6E-20 139.6 6.0 72 191-262 225-307 (311)
72 COG0560 SerB Phosphoserine pho 99.6 9.6E-15 2.1E-19 125.0 12.1 190 13-251 3-198 (212)
73 TIGR03333 salvage_mtnX 2-hydro 99.6 7.8E-15 1.7E-19 126.0 10.0 125 98-267 68-213 (214)
74 TIGR01670 YrbI-phosphatas 3-de 99.6 1.2E-14 2.5E-19 118.6 9.8 112 105-269 36-152 (154)
75 TIGR01668 YqeG_hyp_ppase HAD s 99.5 1.5E-13 3.2E-18 113.9 13.6 93 100-244 43-140 (170)
76 TIGR02726 phenyl_P_delta pheny 99.5 1.3E-14 2.8E-19 119.7 7.1 111 107-269 44-158 (169)
77 PRK05446 imidazole glycerol-ph 99.5 1.2E-13 2.5E-18 126.3 13.9 111 98-262 28-161 (354)
78 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.5 1.6E-13 3.4E-18 116.5 13.7 108 99-239 86-197 (202)
79 PRK11009 aphA acid phosphatase 99.5 1.6E-13 3.4E-18 119.0 12.3 109 83-244 98-215 (237)
80 PRK10530 pyridoxal phosphate ( 99.5 1.2E-13 2.5E-18 122.6 11.0 70 195-265 197-270 (272)
81 PF06888 Put_Phosphatase: Puta 99.5 2.3E-12 5.1E-17 111.2 17.7 156 81-265 58-233 (234)
82 PRK09484 3-deoxy-D-manno-octul 99.5 1.5E-13 3.2E-18 115.2 8.6 100 110-262 61-168 (183)
83 PRK01158 phosphoglycolate phos 99.5 1.3E-13 2.8E-18 119.4 8.4 70 195-265 155-228 (230)
84 TIGR01488 HAD-SF-IB Haloacid D 99.5 1.7E-13 3.8E-18 113.5 8.9 104 98-232 71-177 (177)
85 smart00577 CPDc catalytic doma 99.5 2.3E-14 4.9E-19 116.1 2.9 93 98-236 43-138 (148)
86 TIGR01681 HAD-SF-IIIC HAD-supe 99.5 2.2E-13 4.7E-18 107.6 7.7 85 100-231 29-126 (128)
87 TIGR01456 CECR5 HAD-superfamil 99.5 1.1E-12 2.4E-17 119.4 13.5 71 192-262 229-320 (321)
88 COG2179 Predicted hydrolase of 99.4 6.4E-13 1.4E-17 106.5 9.7 89 103-243 49-141 (175)
89 PF13242 Hydrolase_like: HAD-h 99.4 3.6E-13 7.7E-18 96.3 7.5 65 194-258 2-75 (75)
90 PF00702 Hydrolase: haloacid d 99.4 3.5E-13 7.6E-18 114.8 8.2 87 99-233 126-215 (215)
91 PHA02530 pseT polynucleotide k 99.4 5.5E-13 1.2E-17 120.1 8.5 108 99-242 186-298 (300)
92 KOG2882 p-Nitrophenyl phosphat 99.4 8.9E-13 1.9E-17 115.2 8.7 96 167-262 195-303 (306)
93 TIGR01482 SPP-subfamily Sucros 99.4 4.7E-13 1E-17 115.4 6.2 62 195-257 147-210 (225)
94 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.3 3.3E-12 7.2E-17 111.7 6.9 48 194-241 193-242 (242)
95 TIGR01487 SPP-like sucrose-pho 99.3 2.2E-12 4.8E-17 110.7 5.1 60 195-254 145-205 (215)
96 KOG3040 Predicted sugar phosph 99.3 3.5E-12 7.6E-17 105.5 6.0 73 192-264 177-258 (262)
97 PRK00192 mannosyl-3-phosphogly 99.3 7.1E-11 1.5E-15 105.1 14.2 70 197-266 190-270 (273)
98 TIGR01460 HAD-SF-IIA Haloacid 99.3 1E-11 2.3E-16 108.2 8.0 51 192-242 184-236 (236)
99 KOG1615 Phosphoserine phosphat 99.3 1.3E-11 2.8E-16 101.2 7.6 194 13-258 14-221 (227)
100 COG0561 Cof Predicted hydrolas 99.3 3.6E-11 7.7E-16 106.4 10.9 72 195-266 187-261 (264)
101 PRK15126 thiamin pyrimidine py 99.3 2.6E-12 5.6E-17 114.2 3.5 82 183-269 178-265 (272)
102 TIGR02244 HAD-IG-Ncltidse HAD 99.3 1.1E-10 2.4E-15 106.0 13.7 130 98-241 182-324 (343)
103 PRK10976 putative hydrolase; P 99.2 8E-11 1.7E-15 104.2 12.4 78 184-266 181-264 (266)
104 PRK10513 sugar phosphate phosp 99.2 2.8E-11 6E-16 107.4 9.2 71 195-266 194-268 (270)
105 PRK03669 mannosyl-3-phosphogly 99.2 5.4E-11 1.2E-15 105.8 10.7 73 195-267 185-269 (271)
106 PLN02887 hydrolase family prot 99.2 1.1E-10 2.4E-15 113.2 12.4 76 184-264 498-577 (580)
107 TIGR01686 FkbH FkbH-like domai 99.2 5.6E-11 1.2E-15 108.2 8.5 87 101-235 32-125 (320)
108 TIGR01544 HAD-SF-IE haloacid d 99.2 5.3E-10 1.1E-14 98.7 14.2 122 78-232 103-230 (277)
109 PRK11590 hypothetical protein; 99.2 3.1E-10 6.7E-15 97.3 12.3 106 99-242 94-204 (211)
110 COG0241 HisB Histidinol phosph 99.2 5.1E-10 1.1E-14 92.6 12.3 65 195-259 104-173 (181)
111 COG4229 Predicted enolase-phos 99.2 1.5E-09 3.3E-14 88.2 14.3 197 13-256 2-224 (229)
112 PRK08238 hypothetical protein; 99.2 9.1E-10 2E-14 105.0 15.4 97 97-243 69-168 (479)
113 KOG3120 Predicted haloacid deh 99.2 7.3E-10 1.6E-14 92.7 12.7 217 11-268 9-249 (256)
114 TIGR01663 PNK-3'Pase polynucle 99.1 1.6E-10 3.5E-15 110.7 9.0 89 101-234 198-305 (526)
115 TIGR02463 MPGP_rel mannosyl-3- 99.1 3.7E-10 8.1E-15 97.2 8.8 43 195-237 177-219 (221)
116 COG1778 Low specificity phosph 99.1 2E-10 4.4E-15 91.2 5.3 104 106-262 44-155 (170)
117 TIGR01545 YfhB_g-proteo haloac 99.0 1.7E-08 3.8E-13 86.4 14.9 106 99-242 93-203 (210)
118 TIGR01485 SPP_plant-cyano sucr 98.9 1.7E-08 3.7E-13 88.6 13.2 50 195-244 165-214 (249)
119 TIGR00099 Cof-subfamily Cof su 98.9 1E-09 2.2E-14 96.7 5.3 67 185-256 180-248 (256)
120 PTZ00445 p36-lilke protein; Pr 98.9 7.3E-09 1.6E-13 87.0 8.5 50 194-243 155-208 (219)
121 TIGR01533 lipo_e_P4 5'-nucleot 98.8 3.1E-08 6.8E-13 87.4 10.9 84 98-231 116-206 (266)
122 PF12689 Acid_PPase: Acid Phos 98.8 2.8E-09 6E-14 87.7 3.7 99 97-243 42-154 (169)
123 TIGR01486 HAD-SF-IIB-MPGP mann 98.8 8.1E-08 1.7E-12 84.6 13.1 70 195-264 174-254 (256)
124 TIGR02471 sucr_syn_bact_C sucr 98.8 4.3E-08 9.2E-13 85.3 11.0 68 195-263 157-232 (236)
125 PF09419 PGP_phosphatase: Mito 98.8 4E-08 8.7E-13 80.5 10.0 46 195-242 115-166 (168)
126 PF12710 HAD: haloacid dehalog 98.8 1.7E-08 3.8E-13 84.4 6.7 95 103-230 92-192 (192)
127 PF08282 Hydrolase_3: haloacid 98.7 2.3E-08 5E-13 86.6 7.2 62 195-257 184-247 (254)
128 PRK10187 trehalose-6-phosphate 98.7 5.9E-07 1.3E-11 79.7 14.2 72 195-269 172-247 (266)
129 PRK14502 bifunctional mannosyl 98.7 4.3E-08 9.3E-13 95.6 6.8 47 195-241 611-659 (694)
130 TIGR02251 HIF-SF_euk Dullard-l 98.6 3.3E-08 7.2E-13 81.2 2.9 96 99-240 41-139 (162)
131 TIGR02461 osmo_MPG_phos mannos 98.5 3.1E-07 6.6E-12 79.5 7.8 43 195-237 179-223 (225)
132 COG4359 Uncharacterized conser 98.5 3.2E-06 6.9E-11 69.2 12.8 140 98-269 71-218 (220)
133 TIGR01512 ATPase-IB2_Cd heavy 98.5 4.4E-07 9.6E-12 88.3 8.4 110 99-263 361-479 (536)
134 PF08645 PNK3P: Polynucleotide 98.5 2.1E-07 4.5E-12 76.2 5.1 43 195-237 96-153 (159)
135 TIGR01684 viral_ppase viral ph 98.4 2E-06 4.4E-11 76.2 10.4 110 103-226 149-264 (301)
136 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.4 1.5E-06 3.2E-11 76.0 9.2 90 97-234 21-116 (242)
137 PTZ00174 phosphomannomutase; P 98.4 1.1E-06 2.3E-11 77.2 8.3 45 195-243 186-234 (247)
138 PF06941 NT5C: 5' nucleotidase 98.4 6.7E-07 1.5E-11 75.3 6.8 48 217-264 139-187 (191)
139 PRK12702 mannosyl-3-phosphogly 98.4 1.5E-06 3.3E-11 77.1 8.6 43 196-238 207-251 (302)
140 TIGR01511 ATPase-IB1_Cu copper 98.4 2E-06 4.3E-11 84.2 9.7 109 99-263 404-519 (562)
141 TIGR01525 ATPase-IB_hvy heavy 98.3 1.9E-06 4.2E-11 84.3 9.4 109 99-262 383-499 (556)
142 PF05761 5_nucleotid: 5' nucle 98.3 6.9E-06 1.5E-10 77.6 10.9 128 98-241 181-325 (448)
143 PLN02382 probable sucrose-phos 98.2 1E-05 2.2E-10 76.2 11.2 50 195-244 173-225 (413)
144 PHA03398 viral phosphatase sup 98.2 9.4E-06 2E-10 72.0 10.0 110 103-226 151-266 (303)
145 TIGR00685 T6PP trehalose-phosp 98.2 5.8E-06 1.2E-10 72.4 7.7 70 196-265 166-242 (244)
146 PRK14501 putative bifunctional 98.2 6.4E-06 1.4E-10 83.1 8.8 68 195-266 655-724 (726)
147 PRK10671 copA copper exporting 98.1 1.1E-05 2.5E-10 82.5 9.9 109 100-263 650-765 (834)
148 PLN02423 phosphomannomutase 98.1 4.6E-05 9.9E-10 66.8 12.1 42 195-241 187-232 (245)
149 COG4087 Soluble P-type ATPase 98.1 3E-05 6.5E-10 60.1 9.2 114 99-264 29-148 (152)
150 TIGR01522 ATPase-IIA2_Ca golgi 98.1 1.5E-05 3.3E-10 82.1 9.5 137 100-264 528-672 (884)
151 PF05116 S6PP: Sucrose-6F-phos 98.1 2E-05 4.3E-10 69.2 8.7 48 195-243 163-210 (247)
152 KOG2630 Enolase-phosphatase E- 97.8 0.0002 4.3E-09 60.8 10.0 103 100-244 123-228 (254)
153 PLN02177 glycerol-3-phosphate 97.8 0.00081 1.8E-08 64.7 15.1 98 101-235 111-210 (497)
154 COG2503 Predicted secreted aci 97.7 0.00018 4E-09 61.6 8.3 95 82-230 108-210 (274)
155 TIGR01675 plant-AP plant acid 97.6 0.00053 1.1E-08 59.2 10.2 46 98-144 118-169 (229)
156 COG4996 Predicted phosphatase 97.6 0.00016 3.4E-09 56.1 6.2 48 98-145 39-89 (164)
157 COG3700 AphA Acid phosphatase 97.6 0.00022 4.9E-09 58.2 7.1 35 204-242 179-213 (237)
158 PF03031 NIF: NLI interacting 97.6 2.5E-05 5.4E-10 63.6 1.5 90 99-234 35-127 (159)
159 PF03767 Acid_phosphat_B: HAD 97.6 3.7E-05 8.1E-10 66.7 2.5 90 100-232 115-211 (229)
160 COG4030 Uncharacterized protei 97.6 0.002 4.4E-08 54.8 12.3 163 98-262 81-261 (315)
161 TIGR01484 HAD-SF-IIB HAD-super 97.5 7.4E-05 1.6E-09 63.3 3.4 43 195-237 161-203 (204)
162 TIGR01116 ATPase-IIA1_Ca sarco 97.5 0.00044 9.5E-09 71.6 9.6 136 100-263 537-683 (917)
163 COG5663 Uncharacterized conser 97.5 0.00025 5.5E-09 57.3 5.9 60 204-267 128-191 (194)
164 PRK11033 zntA zinc/cadmium/mer 97.4 0.00091 2E-08 67.7 10.2 106 100-262 568-680 (741)
165 TIGR02250 FCP1_euk FCP1-like p 97.3 0.00043 9.3E-09 56.4 5.7 52 97-148 55-110 (156)
166 smart00775 LNS2 LNS2 domain. T 97.3 0.0029 6.2E-08 51.6 9.7 39 198-236 103-142 (157)
167 PF11019 DUF2608: Protein of u 97.3 0.012 2.6E-07 51.8 14.3 50 195-244 160-213 (252)
168 TIGR02245 HAD_IIID1 HAD-superf 97.2 0.0015 3.1E-08 55.2 7.5 38 100-137 45-84 (195)
169 PRK14010 potassium-transportin 97.2 0.0022 4.7E-08 64.0 9.6 110 100-264 441-557 (673)
170 TIGR01497 kdpB K+-transporting 97.1 0.0025 5.5E-08 63.4 9.3 108 100-262 446-560 (675)
171 PLN02580 trehalose-phosphatase 97.0 0.0027 5.8E-08 59.0 8.2 74 195-269 299-380 (384)
172 PRK01122 potassium-transportin 97.0 0.0041 8.9E-08 62.1 9.6 109 100-263 445-560 (679)
173 COG2217 ZntA Cation transport 97.0 0.0032 6.8E-08 63.1 8.7 108 100-262 537-651 (713)
174 TIGR01680 Veg_Stor_Prot vegeta 96.9 0.0083 1.8E-07 52.9 9.9 43 97-139 142-190 (275)
175 TIGR01524 ATPase-IIIB_Mg magne 96.7 0.009 1.9E-07 61.7 9.4 134 100-263 515-655 (867)
176 PLN02645 phosphoglycolate phos 96.7 0.0077 1.7E-07 54.7 8.0 86 101-238 45-136 (311)
177 PRK15122 magnesium-transportin 96.6 0.0079 1.7E-07 62.3 8.8 135 100-264 550-691 (903)
178 PRK10517 magnesium-transportin 96.6 0.0093 2E-07 61.7 9.1 134 100-263 550-690 (902)
179 COG3769 Predicted hydrolase (H 96.6 0.0084 1.8E-07 50.9 6.9 37 200-236 194-232 (274)
180 PF05152 DUF705: Protein of un 96.5 0.028 6.2E-07 49.6 10.3 100 113-226 158-260 (297)
181 KOG2469 IMP-GMP specific 5'-nu 96.5 0.11 2.4E-06 48.0 14.0 125 105-242 206-335 (424)
182 TIGR01517 ATPase-IIB_Ca plasma 96.4 0.0061 1.3E-07 63.5 6.7 135 100-262 579-721 (941)
183 TIGR01647 ATPase-IIIA_H plasma 96.4 0.014 3.1E-07 59.3 9.1 139 100-263 442-587 (755)
184 TIGR01523 ATPase-IID_K-Na pota 96.4 0.0082 1.8E-07 63.1 7.0 137 100-263 646-799 (1053)
185 PLN02205 alpha,alpha-trehalose 96.0 0.016 3.6E-07 59.4 7.1 71 195-267 760-846 (854)
186 COG0474 MgtA Cation transport 95.9 0.015 3.3E-07 60.3 6.2 137 99-262 546-691 (917)
187 PLN02499 glycerol-3-phosphate 95.7 0.41 8.8E-06 45.9 14.6 34 103-137 99-133 (498)
188 COG5610 Predicted hydrolase (H 95.6 0.048 1E-06 51.1 7.7 114 83-239 80-201 (635)
189 TIGR01106 ATPase-IIC_X-K sodiu 95.5 0.059 1.3E-06 56.6 8.9 140 100-264 568-738 (997)
190 KOG2470 Similar to IMP-GMP spe 95.5 0.051 1.1E-06 49.3 7.1 122 102-240 242-375 (510)
191 KOG0207 Cation transport ATPas 95.3 0.072 1.6E-06 53.9 8.3 108 100-262 723-837 (951)
192 TIGR01658 EYA-cons_domain eyes 95.3 0.077 1.7E-06 45.9 7.3 45 198-242 215-259 (274)
193 KOG0202 Ca2+ transporting ATPa 95.2 0.036 7.9E-07 55.5 5.6 143 99-269 583-734 (972)
194 PF13344 Hydrolase_6: Haloacid 95.1 0.06 1.3E-06 40.4 5.6 48 100-147 14-67 (101)
195 PLN03017 trehalose-phosphatase 95.1 0.14 3.1E-06 47.3 9.0 75 195-269 281-362 (366)
196 PLN02151 trehalose-phosphatase 95.1 0.1 2.3E-06 48.0 8.1 73 196-269 268-348 (354)
197 PF05822 UMPH-1: Pyrimidine 5' 95.1 0.15 3.2E-06 44.5 8.5 53 81-137 75-130 (246)
198 TIGR01652 ATPase-Plipid phosph 94.3 0.14 3E-06 54.3 7.7 63 196-262 754-819 (1057)
199 TIGR01689 EcbF-BcbF capsule bi 93.9 0.083 1.8E-06 41.4 4.0 15 16-30 2-16 (126)
200 TIGR01494 ATPase_P-type ATPase 93.9 0.27 5.9E-06 47.6 8.5 94 100-254 347-443 (499)
201 PLN03190 aminophospholipid tra 93.7 0.06 1.3E-06 57.3 3.7 63 196-262 857-922 (1178)
202 TIGR01657 P-ATPase-V P-type AT 93.4 0.52 1.1E-05 50.0 10.1 39 100-138 656-697 (1054)
203 KOG2961 Predicted hydrolase (H 93.3 0.074 1.6E-06 42.6 2.8 34 211-244 137-171 (190)
204 PF08235 LNS2: LNS2 (Lipin/Ned 93.3 0.35 7.7E-06 39.3 6.7 21 215-235 121-141 (157)
205 COG0647 NagD Predicted sugar p 93.1 0.94 2E-05 40.2 9.8 51 97-147 21-78 (269)
206 COG3882 FkbH Predicted enzyme 93.1 1 2.2E-05 42.9 10.3 39 196-234 310-348 (574)
207 PF13344 Hydrolase_6: Haloacid 92.1 0.1 2.2E-06 39.1 2.1 34 18-54 1-34 (101)
208 TIGR01452 PGP_euk phosphoglyco 92.1 0.63 1.4E-05 41.4 7.5 83 102-237 20-108 (279)
209 TIGR01484 HAD-SF-IIB HAD-super 92.1 0.12 2.6E-06 43.5 2.7 27 17-43 1-28 (204)
210 COG2216 KdpB High-affinity K+ 89.0 0.97 2.1E-05 43.4 5.9 86 100-239 447-535 (681)
211 KOG3107 Predicted haloacid deh 88.0 1.4 3.1E-05 40.5 6.2 43 198-241 410-452 (468)
212 KOG3128 Uncharacterized conser 86.6 1.1 2.3E-05 39.2 4.3 51 81-135 123-176 (298)
213 PLN02580 trehalose-phosphatase 84.8 2.1 4.5E-05 40.1 5.6 34 100-133 141-176 (384)
214 PF06014 DUF910: Bacterial pro 83.4 0.47 1E-05 32.0 0.6 25 202-230 7-31 (62)
215 TIGR00685 T6PP trehalose-phosp 81.6 1.5 3.2E-05 38.2 3.3 29 15-43 3-36 (244)
216 TIGR01457 HAD-SF-IIA-hyp2 HAD- 79.0 9.5 0.00021 33.3 7.5 45 103-147 20-70 (249)
217 PF06189 5-nucleotidase: 5'-nu 78.9 8.1 0.00018 34.0 6.8 40 195-243 222-261 (264)
218 PLN03017 trehalose-phosphatase 78.7 1.9 4.2E-05 40.0 3.1 30 14-43 110-144 (366)
219 PF02358 Trehalose_PPase: Treh 77.1 2.5 5.5E-05 36.4 3.3 60 195-254 163-233 (235)
220 PF02571 CbiJ: Precorrin-6x re 76.8 49 0.0011 29.0 11.3 60 200-263 184-248 (249)
221 PLN03063 alpha,alpha-trehalose 76.8 11 0.00025 38.7 8.3 83 195-277 676-795 (797)
222 KOG0210 P-type ATPase [Inorgan 74.9 2.6 5.7E-05 42.0 2.9 63 196-262 767-832 (1051)
223 PLN02205 alpha,alpha-trehalose 73.5 3.6 7.7E-05 42.7 3.7 30 14-43 595-627 (854)
224 KOG0206 P-type ATPase [General 71.1 2.7 5.8E-05 44.5 2.2 57 195-255 779-838 (1151)
225 COG4502 5'(3')-deoxyribonucleo 70.8 2.1 4.6E-05 34.0 1.0 103 97-264 65-176 (180)
226 PLN02151 trehalose-phosphatase 70.4 3.9 8.4E-05 37.8 2.8 30 14-43 97-131 (354)
227 KOG3189 Phosphomannomutase [Li 70.2 4.4 9.5E-05 34.2 2.8 29 15-43 11-39 (252)
228 KOG1618 Predicted phosphatase 69.1 7.6 0.00017 35.2 4.3 49 194-242 269-342 (389)
229 KOG3040 Predicted sugar phosph 67.6 40 0.00086 28.9 8.0 107 101-268 24-137 (262)
230 COG5083 SMP2 Uncharacterized p 66.8 3 6.4E-05 39.3 1.3 30 206-235 486-516 (580)
231 PF01071 GARS_A: Phosphoribosy 65.6 34 0.00073 28.8 7.3 68 200-267 4-72 (194)
232 TIGR01458 HAD-SF-IIA-hyp3 HAD- 64.7 15 0.00031 32.3 5.3 47 101-147 22-74 (257)
233 PLN03064 alpha,alpha-trehalose 64.6 8.1 0.00018 40.4 4.1 37 100-136 622-662 (934)
234 PRK10444 UMP phosphatase; Prov 64.1 21 0.00044 31.2 6.1 47 101-147 18-70 (248)
235 COG4483 Uncharacterized protei 63.6 5.5 0.00012 27.1 1.8 26 202-231 7-32 (68)
236 COG0027 PurT Formate-dependent 62.9 24 0.00052 32.1 6.2 81 201-288 117-198 (394)
237 TIGR01460 HAD-SF-IIA Haloacid 62.7 35 0.00077 29.3 7.3 49 99-147 13-68 (236)
238 TIGR02251 HIF-SF_euk Dullard-l 61.8 5.6 0.00012 32.3 2.0 15 16-30 2-16 (162)
239 TIGR02250 FCP1_euk FCP1-like p 60.5 6.5 0.00014 31.8 2.1 18 14-31 5-22 (156)
240 COG1877 OtsB Trehalose-6-phosp 57.5 6.3 0.00014 34.9 1.7 72 196-269 181-255 (266)
241 PF02358 Trehalose_PPase: Treh 55.8 14 0.0003 31.8 3.5 31 19-50 1-36 (235)
242 KOG0323 TFIIF-interacting CTD 54.6 22 0.00049 35.4 5.0 51 98-148 199-253 (635)
243 TIGR00715 precor6x_red precorr 51.0 24 0.00053 31.0 4.3 62 200-265 187-254 (256)
244 TIGR02468 sucrsPsyn_pln sucros 50.4 24 0.00052 37.4 4.7 46 185-235 948-995 (1050)
245 PF02222 ATP-grasp: ATP-grasp 49.8 47 0.001 27.3 5.5 59 206-265 1-61 (172)
246 PF06437 ISN1: IMP-specific 5' 49.6 18 0.00038 33.7 3.2 44 198-243 350-402 (408)
247 KOG1618 Predicted phosphatase 48.2 10 0.00023 34.4 1.5 22 15-36 35-56 (389)
248 KOG0209 P-type ATPase [Inorgan 47.3 46 0.001 34.4 5.9 31 213-243 806-836 (1160)
249 PRK00994 F420-dependent methyl 46.5 2E+02 0.0044 25.1 9.4 44 195-241 72-117 (277)
250 COG1877 OtsB Trehalose-6-phosp 45.6 93 0.002 27.6 7.1 31 13-43 16-51 (266)
251 PRK08057 cobalt-precorrin-6x r 43.4 44 0.00096 29.3 4.7 63 200-266 180-247 (248)
252 COG1872 Uncharacterized conser 42.1 36 0.00078 25.5 3.3 32 188-219 42-73 (102)
253 PRK13790 phosphoribosylamine-- 41.4 1.4E+02 0.0031 27.7 8.1 70 198-267 67-136 (379)
254 PF13535 ATP-grasp_4: ATP-gras 41.0 1.8E+02 0.0039 23.0 8.2 70 199-269 5-75 (184)
255 cd01766 Ufm1 Urm1-like ubiquit 40.2 54 0.0012 23.0 3.7 46 195-242 25-70 (82)
256 KOG0204 Calcium transporting A 40.0 96 0.0021 32.2 6.9 138 100-264 647-793 (1034)
257 KOG1605 TFIIF-interacting CTD 38.6 20 0.00043 31.7 1.8 97 99-243 130-232 (262)
258 KOG2832 TFIIF-interacting CTD 38.5 1E+02 0.0022 28.7 6.2 43 99-141 213-257 (393)
259 KOG2134 Polynucleotide kinase 36.9 22 0.00047 33.2 1.8 19 13-31 73-91 (422)
260 PF02594 DUF167: Uncharacteris 35.5 42 0.00092 23.7 2.7 32 188-219 32-63 (77)
261 KOG1605 TFIIF-interacting CTD 35.1 13 0.00029 32.8 0.1 17 14-30 88-104 (262)
262 KOG2961 Predicted hydrolase (H 33.4 51 0.0011 26.8 3.1 37 13-50 41-78 (190)
263 PRK13789 phosphoribosylamine-- 33.3 2.9E+02 0.0063 26.2 8.9 71 198-268 108-178 (426)
264 PRK01530 hypothetical protein; 32.6 36 0.00078 25.7 2.1 32 188-219 45-76 (105)
265 KOG2882 p-Nitrophenyl phosphat 32.5 1.1E+02 0.0025 27.5 5.5 41 97-137 35-81 (306)
266 COG4850 Uncharacterized conser 32.5 1.5E+02 0.0033 27.2 6.3 36 99-134 195-234 (373)
267 KOG0025 Zn2+-binding dehydroge 31.7 1.9E+02 0.0042 26.2 6.7 65 171-243 125-195 (354)
268 PRK05090 hypothetical protein; 31.6 45 0.00097 24.7 2.4 32 188-219 38-69 (95)
269 PF01990 ATP-synt_F: ATP synth 31.4 1E+02 0.0022 22.4 4.4 24 216-240 1-24 (95)
270 TIGR01456 CECR5 HAD-superfamil 31.4 1.4E+02 0.003 27.0 6.2 40 99-138 15-65 (321)
271 COG4548 NorD Nitric oxide redu 30.5 2.1E+02 0.0046 28.1 7.2 98 171-268 508-634 (637)
272 PLN03063 alpha,alpha-trehalose 30.0 30 0.00064 35.8 1.7 15 15-29 507-521 (797)
273 PRK00192 mannosyl-3-phosphogly 29.2 70 0.0015 28.0 3.8 29 112-140 36-64 (273)
274 PRK00647 hypothetical protein; 28.7 49 0.0011 24.5 2.2 30 188-217 33-62 (96)
275 COG2897 SseA Rhodanese-related 27.9 1.8E+02 0.0039 26.1 6.1 49 195-243 71-125 (285)
276 PRK01310 hypothetical protein; 26.8 56 0.0012 24.6 2.3 31 188-218 44-74 (104)
277 PF14336 DUF4392: Domain of un 26.5 4.1E+02 0.0089 23.8 8.2 29 199-231 165-193 (291)
278 PRK12815 carB carbamoyl phosph 25.4 3E+02 0.0066 29.6 8.2 70 198-268 128-198 (1068)
279 COG0626 MetC Cystathionine bet 25.3 5.8E+02 0.013 24.1 10.6 106 102-261 65-174 (396)
280 COG0378 HypB Ni2+-binding GTPa 24.7 89 0.0019 26.5 3.3 68 195-262 23-94 (202)
281 TIGR01142 purT phosphoribosylg 24.6 4.2E+02 0.0092 24.2 8.3 67 201-268 103-171 (380)
282 KOG2116 Protein involved in pl 24.3 39 0.00084 33.7 1.2 37 200-236 636-673 (738)
283 TIGR00877 purD phosphoribosyla 24.1 3.7E+02 0.008 25.1 7.9 70 198-268 104-175 (423)
284 PRK00885 phosphoribosylamine-- 24.0 5.4E+02 0.012 24.0 9.0 70 198-268 102-172 (420)
285 PLN02257 phosphoribosylamine-- 24.0 4.8E+02 0.01 24.8 8.6 69 198-267 102-171 (434)
286 PRK02228 V-type ATP synthase s 24.0 1.7E+02 0.0037 21.6 4.5 24 215-239 2-25 (100)
287 cd00886 MogA_MoaB MogA_MoaB fa 23.0 3E+02 0.0064 21.8 6.1 63 196-258 19-86 (152)
288 PF02350 Epimerase_2: UDP-N-ac 22.7 1.6E+02 0.0035 27.0 5.0 83 116-242 12-100 (346)
289 COG0079 HisC Histidinol-phosph 22.7 5.1E+02 0.011 23.9 8.3 84 115-250 76-162 (356)
290 KOG0208 Cation transport ATPas 22.6 2.4E+02 0.0052 29.9 6.4 20 215-234 854-873 (1140)
291 cd01455 vWA_F11C1-5a_type Von 21.9 4.8E+02 0.01 21.9 7.8 73 195-267 90-187 (191)
292 cd06539 CIDE_N_A CIDE_N domain 21.5 59 0.0013 23.1 1.4 14 15-28 40-53 (78)
293 cd06537 CIDE_N_B CIDE_N domain 21.4 59 0.0013 23.3 1.4 14 15-28 39-52 (81)
294 PRK15317 alkyl hydroperoxide r 21.2 7.5E+02 0.016 23.9 9.8 58 214-271 212-281 (517)
295 PF09269 DUF1967: Domain of un 21.1 82 0.0018 21.6 2.1 24 200-223 43-66 (69)
296 COG0026 PurK Phosphoribosylami 20.5 2.6E+02 0.0057 26.1 5.7 87 201-290 102-189 (375)
297 PF03332 PMM: Eukaryotic phosp 20.3 2.7E+02 0.0058 24.0 5.4 29 213-241 175-207 (220)
298 smart00266 CAD Domains present 20.2 59 0.0013 22.9 1.2 14 15-28 38-51 (74)
299 PRK09288 purT phosphoribosylgl 20.1 6.3E+02 0.014 23.1 8.5 68 200-268 115-184 (395)
300 TIGR01369 CPSaseII_lrg carbamo 20.0 4.7E+02 0.01 28.1 8.4 72 197-268 126-197 (1050)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=100.00 E-value=2.9e-34 Score=237.31 Aligned_cols=232 Identities=59% Similarity=0.997 Sum_probs=219.7
Q ss_pred CCcccccccccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCC
Q 036723 1 MEYKNENKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQ 80 (290)
Q Consensus 1 ~~~~~~~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (290)
|+++......+.+++++++||+|.||+..+..+.....+.|.+++.+++|++...+..++..+|+.||.+..++...++.
T Consensus 1 m~f~~~~~~~~~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~ 80 (244)
T KOG3109|consen 1 MTFEGDVFISSGPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYI 80 (244)
T ss_pred CCCCCcccccCCccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhccc
Confidence 77777777778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCCCc-EEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccc
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLPIR-KVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLV 159 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~-~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 159 (290)
.+.++|.++++++++++.++|-+.++++|-.|+.+ .+++||+.+.++.++++++|+.++|++|++.+..++.
T Consensus 81 ~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~------- 153 (244)
T KOG3109|consen 81 FDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI------- 153 (244)
T ss_pred CCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-------
Confidence 99999999999999999999999999999999977 9999999999999999999999999999999876641
Q ss_pred ccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 160 DQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
..+++.||.+.+|+.+++..|++ |.+++||+||.++|..|++.|+.+++
T Consensus 154 ------------------------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvl 203 (244)
T KOG3109|consen 154 ------------------------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVL 203 (244)
T ss_pred ------------------------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEE
Confidence 23677999999999999999997 99999999999999999999999999
Q ss_pred ecCCCCCCCcceeecCHhHHHHHhHHHHHhh
Q 036723 239 VGTSHRAEGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 239 v~~~~~~~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
++..+...++++++.++.+..++++++|+..
T Consensus 204 v~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~ 234 (244)
T KOG3109|consen 204 VGREHKIKGVDYALEQIHNNKEALPELWEIL 234 (244)
T ss_pred EEeeecccchHHHHHHhhchhhhchHHhhcc
Confidence 9999988899999999999999999999986
No 2
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.95 E-value=4.7e-27 Score=197.03 Aligned_cols=184 Identities=48% Similarity=0.864 Sum_probs=152.6
Q ss_pred cEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhcCC
Q 036723 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLP 95 (290)
Q Consensus 16 k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (290)
++|+||+||||+|+...+..++.+++.+++...+|++......+...++..+|.....+... ...+.+.+.+.+++...
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 47999999999998889999998888887788899887766556666666667655544332 34556677777766444
Q ss_pred CCCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 96 YMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 96 ~~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
...+.++||+.++|+.|+.+++++||++...+...++++|+..+|+.++++++.+...
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~---------------------- 137 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDY---------------------- 137 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCcc----------------------
Confidence 4567899999999999999999999999999999999999999999999998776310
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
...||+|++|+.+++++|++|+++++|||+..|+++|+++|+.+|++
T Consensus 138 -----------------~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 138 -----------------LLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred -----------------CCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 01499999999999999999999999999999999999999999875
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.95 E-value=4.1e-27 Score=202.03 Aligned_cols=199 Identities=17% Similarity=0.237 Sum_probs=148.0
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhh
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHG 92 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 92 (290)
|++|+|+||+||||+|+...+..++.++ ..+++...... ..+...+|.+.............+.+.+.+..
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~-----~~~~~~~~~~~----~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 71 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHT-----LKTYYPNQYKR----EDVLPFIGPSLHDTFSKIDESKVEEMITTYRE 71 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHH-----HHHhCCCCCCH----HHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHH
Confidence 4689999999999999776666666633 33334322221 12333445554332221111112222222222
Q ss_pred c---CCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccC
Q 036723 93 R---LPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 93 ~---~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
. .....+.++||+.++|+.|+ ++++|+||+....+...++.+|+..+|+.++++++...
T Consensus 72 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------- 136 (214)
T PRK13288 72 FNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH--------------- 136 (214)
T ss_pred HHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC---------------
Confidence 1 11235678999999999996 78999999999999999999999999999999887765
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-- 244 (290)
+||+|+.++.++++++++|+++++|||+.+|+++|+++|+.++++.++..
T Consensus 137 ----------------------------~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~ 188 (214)
T PRK13288 137 ----------------------------AKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGR 188 (214)
T ss_pred ----------------------------CCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCH
Confidence 79999999999999999999999999999999999999999999988753
Q ss_pred ----CCCcceeecCHhHHHHHhH
Q 036723 245 ----AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 245 ----~~~ad~v~~sl~el~~~l~ 263 (290)
...++++++++.++.+++.
T Consensus 189 ~~l~~~~~~~~i~~~~~l~~~i~ 211 (214)
T PRK13288 189 EYLEQYKPDFMLDKMSDLLAIVG 211 (214)
T ss_pred HHHhhcCcCEEECCHHHHHHHHh
Confidence 3468999999999988664
No 4
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.95 E-value=1.2e-26 Score=200.23 Aligned_cols=200 Identities=21% Similarity=0.284 Sum_probs=153.3
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH--cCCC------CCH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA--IGYQ------FDC 83 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~------~~~ 83 (290)
+|++++|+||+||||+|+...+..++. ..++.++.+......+. ...|........ .+.. ...
T Consensus 1 ~~~~~~iiFDlDGTL~Ds~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~ig~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T COG0546 1 MMMIKAILFDLDGTLVDSAEDILRAFN-----AALAELGLPPLDEEEIR----QLIGLGLDELIERLLGEADEEAAAELV 71 (220)
T ss_pred CCCCCEEEEeCCCccccChHHHHHHHH-----HHHHHcCCCCCCHHHHH----HHhcCCHHHHHHHHhccccchhHHHHH
Confidence 367999999999999998888888877 57788888864433222 222333322111 1100 012
Q ss_pred HHHHHHHhhcCCCC-CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccc
Q 036723 84 DDFHSYVHGRLPYM-MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLV 159 (290)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 159 (290)
+.+.+.+....... ...++||+.++|..|+ ++++|+||.+...+...++++|+..+|+.+++.++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~-------- 143 (220)
T COG0546 72 ERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP-------- 143 (220)
T ss_pred HHHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC--------
Confidence 22222222222111 2588999999999986 78999999999999999999999999999999555443
Q ss_pred ccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 160 DQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.||+|..+..+++++|++|++++||||+.+|+++|++||++++++
T Consensus 144 -----------------------------------~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v 188 (220)
T COG0546 144 -----------------------------------PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGV 188 (220)
T ss_pred -----------------------------------CCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEE
Confidence 799999999999999999889999999999999999999999999
Q ss_pred cCCCC------CCCcceeecCHhHHHHHhH
Q 036723 240 GTSHR------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 240 ~~~~~------~~~ad~v~~sl~el~~~l~ 263 (290)
.+++. ..++++++.++.||...+.
T Consensus 189 ~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 189 TWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred ECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 98762 5579999999999998764
No 5
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.94 E-value=1.8e-26 Score=202.56 Aligned_cols=194 Identities=18% Similarity=0.273 Sum_probs=142.4
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCC----CcccHHHHHHHHHHHHcccHHHHHH-c-CCCCC---
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCI----EEAKVPELCVSLYKFYGTTLAGLRA-I-GYQFD--- 82 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~----~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~--- 82 (290)
..++|+|+|||||||+|+...+..++.++++ ++|. +... ..+ .....|........ . .....
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~-----~~g~~~g~~~~~-~~~---~~~~~G~~~~~~~~~~~~~~~~~~~ 89 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQ-----EINFNGGVPITE-EFF---VENIAGKHNEDIALGLFPDDLERGL 89 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHHHH-----HhccccCCCCCH-HHH---HHHcCCCCHHHHHHHHcCcchhhHH
Confidence 3458999999999999987777777764443 3332 2211 110 11112333322211 1 00000
Q ss_pred --HHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 83 --CDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 83 --~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
...+...+.+.. ...+.++||+.++|+.|+ ++++|+||+.+..+...++++|+..+|+.++++++...
T Consensus 90 ~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~------ 162 (248)
T PLN02770 90 KFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH------ 162 (248)
T ss_pred HHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC------
Confidence 011222222222 245788999999999885 78999999999999999999999999999999998765
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+||+|+.|..+++++|++|++|++|||+.+|+++|+++|+.+|
T Consensus 163 -------------------------------------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 163 -------------------------------------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred -------------------------------------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 7999999999999999999999999999999999999999999
Q ss_pred EecCCCC-----CCCcceeecCHhHH
Q 036723 238 WVGTSHR-----AEGVDYALESIHNI 258 (290)
Q Consensus 238 ~v~~~~~-----~~~ad~v~~sl~el 258 (290)
++.++.. ..+|+++++++.|+
T Consensus 206 ~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 206 GLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred EEeCCCCHHHHhhcCCCEEeccchhh
Confidence 9987643 34789999999983
No 6
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.94 E-value=7.3e-26 Score=200.86 Aligned_cols=202 Identities=15% Similarity=0.161 Sum_probs=144.8
Q ss_pred CCCccEEEEecCCCcccCCCCh-HHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH--------------H-HH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGL-SKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA--------------G-LR 75 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~-~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~--------------~-~~ 75 (290)
||++|+|+||+||||+|+.... ..++.+ .+..+|.+... . .+...+|.... . ..
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-E----EARGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 4669999999999999965432 344442 34455654322 1 11122222210 0 01
Q ss_pred HcCCCCCHHHH-------HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc-eeEE
Q 036723 76 AIGYQFDCDDF-------HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF-ERII 144 (290)
Q Consensus 76 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~ 144 (290)
..+.....+.+ .+.+.+.. ...+.++||+.++|+.|+ ++++|+||..+..+..+++.+++..+| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 12222222222 12222222 245788999999999995 789999999999999999999888774 8888
Q ss_pred eecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCc
Q 036723 145 SFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSI 223 (290)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~ 223 (290)
++++... .||+|+.|..+++++|+. +++|++|||+.
T Consensus 150 ~~~~~~~-------------------------------------------~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~ 186 (267)
T PRK13478 150 TTDDVPA-------------------------------------------GRPYPWMALKNAIELGVYDVAACVKVDDTV 186 (267)
T ss_pred cCCcCCC-------------------------------------------CCCChHHHHHHHHHcCCCCCcceEEEcCcH
Confidence 8887664 799999999999999996 69999999999
Q ss_pred cchHHHHhcCCeEEEecCCCC-----------------------------CCCcceeecCHhHHHHHhHHHHH
Q 036723 224 RNLETGKRLGLHTVWVGTSHR-----------------------------AEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 224 ~Di~~a~~aGi~~i~v~~~~~-----------------------------~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
+|+++|+++|+.+|++.+++. ..+++++++++.+|.+++..+.-
T Consensus 187 ~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 187 PGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 999999999999999987643 45799999999999998865443
No 7
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=2.5e-26 Score=199.34 Aligned_cols=198 Identities=19% Similarity=0.162 Sum_probs=146.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH-cCCCCCH-------H
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA-IGYQFDC-------D 84 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-------~ 84 (290)
.++|+|+||+||||+|+...+..++. ....+.|.+......+ ....|........ ....... +
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVN-----AMLAARGRAPITLAQL----RPVVSKGARAMLAVAFPELDAAARDALIP 80 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHH-----HHHHHCCCCCCCHHHH----HHHhhhHHHHHHHHHhccCChHHHHHHHH
Confidence 35799999999999997766666665 3556677654332221 2222332222211 1111111 1
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccc
Q 036723 85 DFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQ 161 (290)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 161 (290)
.+.+.+..... ....++||+.++|+.|+ ++++++||+........++++++..+|+.+++.+....
T Consensus 81 ~~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 149 (229)
T PRK13226 81 EFLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE---------- 149 (229)
T ss_pred HHHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC----------
Confidence 22333332221 34688999999999985 67899999999999999999999999999888876554
Q ss_pred ccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 162 DASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++.+
T Consensus 150 ---------------------------------~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 150 ---------------------------------RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred ---------------------------------CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 79999999999999999999999999999999999999999999977
Q ss_pred CCC-------CCCcceeecCHhHHHHHhH
Q 036723 242 SHR-------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 242 ~~~-------~~~ad~v~~sl~el~~~l~ 263 (290)
+.. ..+++++++++.+|.+.+.
T Consensus 197 g~~~~~~~~~~~~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 197 GYRLHDDDPLAWQADVLVEQPQLLWNPAT 225 (229)
T ss_pred cCCCCCcChhhcCCCeeeCCHHHHHHHhc
Confidence 653 2469999999999988664
No 8
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.94 E-value=9.7e-26 Score=194.18 Aligned_cols=195 Identities=16% Similarity=0.192 Sum_probs=145.0
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHH-HHcccHHHH-HHcC--CCCCH---HH--
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYK-FYGTTLAGL-RAIG--YQFDC---DD-- 85 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~g~~~~~~-~~~~--~~~~~---~~-- 85 (290)
+|+|+||+||||+|+...+..++.+ ...+.|.+..... ..+ ..|...... .... ..... +.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEE-----VQSAWMGQSKIEAIRALLALDGADEAEAQAAF 70 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHH-----HHHhhcCCCHHHHHHHHHhccCCCHHHHHHHH
Confidence 5899999999999988877777763 4445666543321 111 223332221 1110 11111 11
Q ss_pred --HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC--CcceeEEeecccCCCCCCccc
Q 036723 86 --FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE--DCFERIISFETLNSTDKGTVL 158 (290)
Q Consensus 86 --~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~ 158 (290)
+.+.+.+........++||+.++|+.|+ ++++|+||+........++++|+. .+|+.++++++...
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~------- 143 (220)
T TIGR03351 71 ADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA------- 143 (220)
T ss_pred HHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC-------
Confidence 2222222222235689999999999995 789999999999999999999998 99999999987765
Q ss_pred cccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHhcCCeE-
Q 036723 159 VDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSIRNLETGKRLGLHT- 236 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~~Di~~a~~aGi~~- 236 (290)
+||+|++|+.+++++|+. |++|++|||+.+|+++|+++|+.+
T Consensus 144 ------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~ 187 (220)
T TIGR03351 144 ------------------------------------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAV 187 (220)
T ss_pred ------------------------------------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeE
Confidence 799999999999999997 799999999999999999999999
Q ss_pred EEecCCCC------CCCcceeecCHhHHHHHh
Q 036723 237 VWVGTSHR------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 237 i~v~~~~~------~~~ad~v~~sl~el~~~l 262 (290)
+++.++.. ..+++++++++.+|.+++
T Consensus 188 i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 188 VGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred EEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 88877643 456899999999987754
No 9
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.94 E-value=9.4e-26 Score=198.51 Aligned_cols=123 Identities=15% Similarity=0.182 Sum_probs=110.5
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc-eeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF-ERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
....++||+.++|+.|+ ++++|+||+....+..+++++|+..+| +.+++++++..
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~--------------------- 154 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPA--------------------- 154 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCC---------------------
Confidence 45789999999999995 789999999999999999999999986 88999887765
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHhcCCeEEEecCCCC-------
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR------- 244 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~------- 244 (290)
+||+|+.|..+++++|+. |++|++|||+.+|+++|+++|+.+|++.++..
T Consensus 155 ----------------------~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~ 212 (253)
T TIGR01422 155 ----------------------GRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEE 212 (253)
T ss_pred ----------------------CCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHH
Confidence 799999999999999995 99999999999999999999999999987652
Q ss_pred ----------------------CCCcceeecCHhHHHHHh
Q 036723 245 ----------------------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 ----------------------~~~ad~v~~sl~el~~~l 262 (290)
..+|+++++++.||.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 213 EYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 357999999999998754
No 10
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.94 E-value=6.8e-26 Score=195.33 Aligned_cols=195 Identities=17% Similarity=0.248 Sum_probs=141.1
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHH-HcccHHHH-----HHcCCCCCHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKF-YGTTLAGL-----RAIGYQFDCDDF 86 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~-~g~~~~~~-----~~~~~~~~~~~~ 86 (290)
+++|+|+||+||||+|+...+..++.+ .+...|.+... .. +... .|...... ...+...+.+.+
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSL-EE----VFKRFKGVKLYEIIDIISKEHGVTLAKAEL 71 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCH-HH----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 458999999999999976666665552 44556765332 11 1112 22222111 223334444555
Q ss_pred HHHHhhcC---CCCCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcce-eEEeecccCCCCCCccccccc
Q 036723 87 HSYVHGRL---PYMMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFE-RIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 87 ~~~~~~~~---~~~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+...+ ....+.++||+.++|+.|+++++|+||+....+...++++++..+|+ .++++++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~----------- 140 (221)
T PRK10563 72 EPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR----------- 140 (221)
T ss_pred HHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC-----------
Confidence 44433221 12457889999999999999999999999999999999999999996 5777776664
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.||+|+.|+.+++++|++|++|++|||+.+|+++|+++|++++++..+
T Consensus 141 --------------------------------~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~ 188 (221)
T PRK10563 141 --------------------------------WKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCAD 188 (221)
T ss_pred --------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCC
Confidence 799999999999999999999999999999999999999999988643
Q ss_pred CC----CCCcceeecCHhHHHH
Q 036723 243 HR----AEGVDYALESIHNIKE 260 (290)
Q Consensus 243 ~~----~~~ad~v~~sl~el~~ 260 (290)
.. ...++.+++++.||.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~ 210 (221)
T PRK10563 189 PHNKPIDHPLVTTFTDLAQLPE 210 (221)
T ss_pred CCCcchhhhhhHHHHHHHHHHH
Confidence 22 2234455666666664
No 11
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.94 E-value=6.7e-26 Score=195.62 Aligned_cols=196 Identities=16% Similarity=0.188 Sum_probs=145.7
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHH-----HcCC-CCCHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR-----AIGY-QFDCDD 85 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~-~~~~~~ 85 (290)
++++|+|+||+||||+|+...+..++. .++.++|.+...... +...+|....... .... ......
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~-----~~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 74 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPLWDRAEL-----DVMASLGVDISRREE----LPDTLGLRIDQVVDLWYARQPWNGPSRQE 74 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHHHHHHHH-----HHHHHCCCCCCHHHH----HHHhhCCCHHHHHHHHHHhcCCCCCCHHH
Confidence 446999999999999997665655554 355667765433111 2222333222111 1111 112222
Q ss_pred H----HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccc
Q 036723 86 F----HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVL 158 (290)
Q Consensus 86 ~----~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 158 (290)
+ .+.+.+.+ .....++||+.++|+.|+ ++++++||+........++++++..+|+.+++++..+.
T Consensus 75 ~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------- 146 (222)
T PRK10826 75 VVQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY------- 146 (222)
T ss_pred HHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC-------
Confidence 2 22222222 245789999999999885 78999999999999999999999999999999887664
Q ss_pred cccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 159 VDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
+||+|+.|+.+++++|++|++|++|||+.+|+++|+++|+++|+
T Consensus 147 ------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~ 190 (222)
T PRK10826 147 ------------------------------------SKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIV 190 (222)
T ss_pred ------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEE
Confidence 79999999999999999999999999999999999999999999
Q ss_pred ecCCCC-----CCCcceeecCHhHHHH
Q 036723 239 VGTSHR-----AEGVDYALESIHNIKE 260 (290)
Q Consensus 239 v~~~~~-----~~~ad~v~~sl~el~~ 260 (290)
+.++.. ...+++++.++.||..
T Consensus 191 v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 191 VPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred ecCCccCchhhhhhhheeccCHHHHhh
Confidence 987653 2368999999999865
No 12
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.94 E-value=1.9e-25 Score=192.35 Aligned_cols=198 Identities=24% Similarity=0.369 Sum_probs=139.3
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCccc--HHHHHHHHHHHHcccH-----HHHHHcCCCCCHHHH-
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAK--VPELCVSLYKFYGTTL-----AGLRAIGYQFDCDDF- 86 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~--~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~- 86 (290)
+++|+||+||||+++...+..++....+. ....|.+... ........++.++... ......+........
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 78999999999999877776655433322 3344444221 1111112222222111 111111111111111
Q ss_pred --HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccc
Q 036723 87 --HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQ 161 (290)
Q Consensus 87 --~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 161 (290)
...+... ....+.++||+.++|+.|+ ++++++||+....+...++++|+..+|+.++++++.+.
T Consensus 80 ~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 148 (221)
T TIGR02253 80 AFVYAYHKL-KFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV---------- 148 (221)
T ss_pred HHHHHHHHH-HHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------
Confidence 1111111 1234688999999999986 77999999999999999999999999999999988775
Q ss_pred ccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEec
Q 036723 162 DASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVG 240 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~ 240 (290)
+||+|+.|+.+++++|++++++++|||+. +|+.+|+++|+.+|++.
T Consensus 149 ---------------------------------~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 149 ---------------------------------EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred ---------------------------------CCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 79999999999999999999999999998 89999999999999998
Q ss_pred CCCC-------CCCcceeecCHhHH
Q 036723 241 TSHR-------AEGVDYALESIHNI 258 (290)
Q Consensus 241 ~~~~-------~~~ad~v~~sl~el 258 (290)
++.. ...++++++++.||
T Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 196 QGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred CCCCcccccccccCCCeeeCcHHhh
Confidence 7653 23578888888776
No 13
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=3.6e-25 Score=196.54 Aligned_cols=204 Identities=17% Similarity=0.217 Sum_probs=150.9
Q ss_pred cccccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHcCCCC-CHH
Q 036723 7 NKQVSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAIGYQF-DCD 84 (290)
Q Consensus 7 ~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~-~~~ 84 (290)
+++.+..++|+|+||+||||+|+...+...+. ...+++|.+...... +.+..|.....+ ...+... ..+
T Consensus 54 ~~~~~~~~~k~vIFDlDGTLiDS~~~~~~a~~-----~~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~ 124 (273)
T PRK13225 54 FPQSYPQTLQAIIFDFDGTLVDSLPTVVAIAN-----AHAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQA 124 (273)
T ss_pred hhhhhhhhcCEEEECCcCccccCHHHHHHHHH-----HHHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHH
Confidence 55566667999999999999997777766665 355667775433211 111123222222 2222110 111
Q ss_pred H----HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 85 D----FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 85 ~----~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
. +.+.+... ...+.++||+.++|+.|+ ++++|+||+....+...++++|+..+|+.+++.+..
T Consensus 125 ~~~~~~~~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~-------- 194 (273)
T PRK13225 125 RLLQRVQRQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI-------- 194 (273)
T ss_pred HHHHHHHHHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC--------
Confidence 1 22222222 245788999999999996 789999999999999999999999999988776532
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+++++.++.++++++++|++|++|||+.+|+++|+++|+.+|
T Consensus 195 --------------------------------------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 195 --------------------------------------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred --------------------------------------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 345689999999999999999999999999999999999999
Q ss_pred EecCCCC------CCCcceeecCHhHHHHHhHHHHH
Q 036723 238 WVGTSHR------AEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 238 ~v~~~~~------~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
++.++.. ..+|+++++++.+|.+++.+++.
T Consensus 237 ~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 237 AVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred EEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence 9988753 34799999999999999888765
No 14
>PRK11587 putative phosphatase; Provisional
Probab=99.93 E-value=1.8e-25 Score=192.50 Aligned_cols=192 Identities=19% Similarity=0.202 Sum_probs=139.1
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH-HHHcCCCCCHHHHHHHHh
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG-LRAIGYQFDCDDFHSYVH 91 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 91 (290)
|++|+|+||+||||+|+...+..++. ..+.++|++.... .. ...|..... +.........+.+.+.+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~---~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 69 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWS-----NWADRHGIAPDEV---LN---FIHGKQAITSLRHFMAGASEAEIQAEFT 69 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHH-----HHHHHcCCCHHHH---HH---HHcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 46899999999999997777777666 3555667653211 11 112332221 111111112222222221
Q ss_pred h-----cCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccc
Q 036723 92 G-----RLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 92 ~-----~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 163 (290)
. ......+.++||+.++|+.|+ ++++++||+........++..++ .+|+.+++.++...
T Consensus 70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~------------ 136 (218)
T PRK11587 70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR------------ 136 (218)
T ss_pred HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC------------
Confidence 1 111245788999999999985 78999999988888888888888 45788888776654
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.||+|+.|..+++++|++|++|++|||+.+|+++|+++|+.+|++.++.
T Consensus 137 -------------------------------~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 137 -------------------------------GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred -------------------------------CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCC
Confidence 6999999999999999999999999999999999999999999998765
Q ss_pred C---CCCcceeecCHhHHH
Q 036723 244 R---AEGVDYALESIHNIK 259 (290)
Q Consensus 244 ~---~~~ad~v~~sl~el~ 259 (290)
. ...++++++++.||.
T Consensus 186 ~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 186 DTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred chhhhccCCEEecchhhee
Confidence 3 346899999998875
No 15
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.93 E-value=2.5e-25 Score=190.41 Aligned_cols=191 Identities=20% Similarity=0.277 Sum_probs=141.6
Q ss_pred EEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHH---HH---
Q 036723 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCD---DF--- 86 (290)
Q Consensus 18 viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~---~~--- 86 (290)
|+||+||||+|+...+..++. ....+.|.+...... +....|...... ...+...+.+ .+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVN-----MALAALGLPPATLAR----VIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHH-----HHHHHCCCCCCCHHH----HHHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 699999999997666665555 355567765433222 222234332211 1112122221 12
Q ss_pred -HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 87 -HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 87 -~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+.+.. .....++||+.++|+.|+ ++++|+||+....+...++++|+..+|+.++++++...
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------- 139 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------- 139 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC-----------
Confidence 22222222 135688999999999986 78999999999999999999999999999999887664
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.||+|+.|+.+++++|++|++|++|||+.+|+++|+++|+.++++.++
T Consensus 140 --------------------------------~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g 187 (213)
T TIGR01449 140 --------------------------------RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYG 187 (213)
T ss_pred --------------------------------CCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccC
Confidence 799999999999999999999999999999999999999999999776
Q ss_pred CC------CCCcceeecCHhHHHHH
Q 036723 243 HR------AEGVDYALESIHNIKEA 261 (290)
Q Consensus 243 ~~------~~~ad~v~~sl~el~~~ 261 (290)
.. ..+++++++++.+|..+
T Consensus 188 ~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 188 YRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred CCCCcchhhcCCCeEeCCHHHHHhh
Confidence 43 34689999999998764
No 16
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.93 E-value=5.4e-25 Score=187.66 Aligned_cols=193 Identities=18% Similarity=0.266 Sum_probs=143.1
Q ss_pred EEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHcCCCCC-HHHHHHHHhhcCC
Q 036723 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAIGYQFD-CDDFHSYVHGRLP 95 (290)
Q Consensus 18 viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~-~~~~~~~~~~~~~ 95 (290)
|+||+||||+|+...+..++.++++ +..|.+..... .+.+..|.....+ ...+.... ...+...... .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYR----EVVGDGPAPFE----EYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR-L- 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHH----HhcCCCCCCHH----HHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH-h-
Confidence 6899999999977766666663332 22354332221 2223334443322 22232111 1112121221 1
Q ss_pred CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 96 YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 96 ~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
...+.++||+.++|+.|+ ++++++||+....+...++++|+..+|+.++++++...
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------------- 129 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR--------------------- 129 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC---------------------
Confidence 246789999999999985 78999999999999999999999999999999887654
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC------CC
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR------AE 246 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~------~~ 246 (290)
+||+|+.|+.+++++|+++++|++|||+.+|+++|+++|++++++.++.. ..
T Consensus 130 ----------------------~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~ 187 (205)
T TIGR01454 130 ----------------------PKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAA 187 (205)
T ss_pred ----------------------CCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhc
Confidence 79999999999999999999999999999999999999999999987753 44
Q ss_pred CcceeecCHhHHHHHhH
Q 036723 247 GVDYALESIHNIKEALP 263 (290)
Q Consensus 247 ~ad~v~~sl~el~~~l~ 263 (290)
+++++++++.+|.++++
T Consensus 188 ~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 188 RPDFLLRKPQSLLALCR 204 (205)
T ss_pred CCCeeeCCHHHHHHHhh
Confidence 68999999999987654
No 17
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.93 E-value=4.2e-25 Score=194.90 Aligned_cols=205 Identities=14% Similarity=0.127 Sum_probs=150.1
Q ss_pred CCccEEEEecCCCcccCCCChH-HHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHH-Hc-CCCCCHH---HH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLS-KEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR-AI-GYQFDCD---DF 86 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~-~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~~---~~ 86 (290)
..+|+|||||||||+|+...++ .++. .+..++|++..... ......|....... .. ....+.+ .+
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~-----~~~~~~G~~~~~~e----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l 92 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWR-----ALAEEEGKRPPPAF----LLKRAEGMKNEQAISEVLCWSRDFLQMKRL 92 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHH-----HHHHHcCCCCCHHH----HHHHhcCCCHHHHHHHHhccCCCHHHHHHH
Confidence 4589999999999999755544 4555 35566777644321 11123344333221 11 1111111 11
Q ss_pred HHHHh---hcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 87 HSYVH---GRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 87 ~~~~~---~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
...+. .........++||+.++|+.|+ ++++|+||+....+...++++|+..+|+.++++++...
T Consensus 93 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~--------- 163 (260)
T PLN03243 93 AIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR--------- 163 (260)
T ss_pred HHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC---------
Confidence 11111 1111234678999999999986 78999999999999999999999999999999988765
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++.
T Consensus 164 ----------------------------------~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 164 ----------------------------------GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred ----------------------------------CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEe
Confidence 7999999999999999999999999999999999999999999986
Q ss_pred CCCC---CCCcceeecCHhHHHHHhHHHHHhh
Q 036723 241 TSHR---AEGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 241 ~~~~---~~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
+... ...+++++.++.+|......-|...
T Consensus 210 g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~ 241 (260)
T PLN03243 210 GKHPVYELSAGDLVVRRLDDLSVVDLKNLSDL 241 (260)
T ss_pred cCCchhhhccCCEEeCCHHHHHHHHHhhhhcc
Confidence 3321 3468999999999988777666655
No 18
>PRK09449 dUMP phosphatase; Provisional
Probab=99.93 E-value=2.5e-24 Score=185.85 Aligned_cols=122 Identities=21% Similarity=0.360 Sum_probs=108.3
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.+.++||+.++|+.|+ ++++++||+........++++|+..+|+.++++++++.
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------ 148 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV------------------------ 148 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC------------------------
Confidence 4678999999999996 78999999999999999999999999999999988775
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCC-CCcEEEEcCCc-cchHHHHhcCCeEEEecCCC-C---CCCcc
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANIN-PRKTIFFDDSI-RNLETGKRLGLHTVWVGTSH-R---AEGVD 249 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~-~---~~~ad 249 (290)
.||+|++|+.+++++|+. +++|++|||+. +|+++|+++|+.++++.++. . ...++
T Consensus 149 -------------------~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~ 209 (224)
T PRK09449 149 -------------------AKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPT 209 (224)
T ss_pred -------------------CCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCe
Confidence 799999999999999985 58999999998 79999999999999997532 1 23589
Q ss_pred eeecCHhHHHHHh
Q 036723 250 YALESIHNIKEAL 262 (290)
Q Consensus 250 ~v~~sl~el~~~l 262 (290)
++++++.||.+++
T Consensus 210 ~~i~~~~el~~~l 222 (224)
T PRK09449 210 YQVSSLSELEQLL 222 (224)
T ss_pred EEECCHHHHHHHH
Confidence 9999999998865
No 19
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.93 E-value=2.2e-24 Score=186.59 Aligned_cols=202 Identities=20% Similarity=0.216 Sum_probs=140.5
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHccc-----HHHHHHcCCCCCHHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTT-----LAGLRAIGYQFDCDDFHS 88 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~ 88 (290)
.+|+|||||||||+|.... ...+.+...+.+....|.+...........+...+.. ...+... .......+
T Consensus 9 ~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 84 (224)
T PRK14988 9 DVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSER-LGLDICAM-- 84 (224)
T ss_pred cCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHH-hCCCHHHH--
Confidence 4789999999999994311 2233333334455677776443322111111111100 0111100 00011111
Q ss_pred HHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 89 YVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 89 ~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
. ... ...+.++||+.++|+.|+ ++++++||+.+..+...++++|+..+|+.++++++++.
T Consensus 85 -~-~~~-~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~-------------- 147 (224)
T PRK14988 85 -T-TEQ-GPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY-------------- 147 (224)
T ss_pred -H-HHH-hccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC--------------
Confidence 1 111 145788999999999996 68999999999999999999999999999999988775
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE-EEecCCCC
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT-VWVGTSHR 244 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~-i~v~~~~~ 244 (290)
+||+|+.|+.+++++|++|++|++|||+.+|+++|+++|+.+ +++.++..
T Consensus 148 -----------------------------~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~ 198 (224)
T PRK14988 148 -----------------------------PKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDS 198 (224)
T ss_pred -----------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence 799999999999999999999999999999999999999984 66766654
Q ss_pred --CCCcceeecCHhHHHHHhHHH
Q 036723 245 --AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 245 --~~~ad~v~~sl~el~~~l~~~ 265 (290)
...+..+..+++++.+.+..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 199 GIAEKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred CccchhccCCCcHHHHHHHhhhh
Confidence 345556678888888877654
No 20
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=1.3e-24 Score=187.61 Aligned_cols=199 Identities=20% Similarity=0.239 Sum_probs=146.9
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHH--
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDD-- 85 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~-- 85 (290)
+++++|+||+||||+++...+..++. . +...++.+......+. ..+|.....+ ...+.....+.
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~----~-~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVN----A-ALAALGLPPAGEERVR----TWVGNGADVLVERALTWAGREPDEELLE 74 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHH----H-HHHHCCCCCCCHHHHH----HHhCccHHHHHHHHHhhccCCccHHHHH
Confidence 56999999999999996555555444 2 4556777654433222 1223222111 11111222222
Q ss_pred -----HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 86 -----FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 86 -----~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
+.+.+..... ....+.||+.++|+.|+ ++++++||+.......+++++++..+|+.+++.+....
T Consensus 75 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------ 147 (226)
T PRK13222 75 KLRELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN------ 147 (226)
T ss_pred HHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC------
Confidence 2222322221 34688999999999886 77999999999999999999999999999988876654
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
.||+|++++.+++++++++++|++|||+.+|+++|+++|+.++
T Consensus 148 -------------------------------------~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i 190 (226)
T PRK13222 148 -------------------------------------KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSV 190 (226)
T ss_pred -------------------------------------CCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEE
Confidence 7999999999999999999999999999999999999999999
Q ss_pred EecCCCC------CCCcceeecCHhHHHHHhHH
Q 036723 238 WVGTSHR------AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 238 ~v~~~~~------~~~ad~v~~sl~el~~~l~~ 264 (290)
++.++.. ...|+++++++.+|..++.+
T Consensus 191 ~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 191 GVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred EECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 9987653 34688999999999987654
No 21
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.93 E-value=3.6e-24 Score=184.40 Aligned_cols=199 Identities=23% Similarity=0.306 Sum_probs=142.8
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHH--HH---HHHHHHHH--c-ccHH---------HHHHc
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVP--EL---CVSLYKFY--G-TTLA---------GLRAI 77 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~--~~---~~~~~~~~--g-~~~~---------~~~~~ 77 (290)
+|+|+||+||||+|+......++.+ +....|.+..... .. ....+..+ + .... .....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999977766655552 3445565432111 11 01111221 1 1111 11112
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 78 GYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
+.....+.+...+..... ....++||+.++|+.|+ ++++++||+....+...++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~---- 150 (224)
T TIGR02254 76 NTEADEALLNQKYLRFLE-EGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI---- 150 (224)
T ss_pred CCCCcHHHHHHHHHHHHh-ccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC----
Confidence 222222223333332221 34678999999999887 78999999999999999999999999999999987765
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHc-CCCCCcEEEEcCCc-cchHHHHhcC
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIA-NINPRKTIFFDDSI-RNLETGKRLG 233 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~-~~~~~e~i~iGDs~-~Di~~a~~aG 233 (290)
.||+|++|+.+++++ |++|+++++|||+. +|+++|+++|
T Consensus 151 ---------------------------------------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G 191 (224)
T TIGR02254 151 ---------------------------------------QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAG 191 (224)
T ss_pred ---------------------------------------CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCC
Confidence 799999999999999 99999999999998 7999999999
Q ss_pred CeEEEecCCCC----CCCcceeecCHhHHHHHh
Q 036723 234 LHTVWVGTSHR----AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 234 i~~i~v~~~~~----~~~ad~v~~sl~el~~~l 262 (290)
++++++.++.. ...+++++.++.||.++|
T Consensus 192 ~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 192 LDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 99999976532 346789999999998754
No 22
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.92 E-value=3.4e-24 Score=196.34 Aligned_cols=202 Identities=14% Similarity=0.184 Sum_probs=149.1
Q ss_pred CccEEEEecCCCcccCCCChHH-HHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHH-Hc-CCCCCHH---HH-
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSK-EVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR-AI-GYQFDCD---DF- 86 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~~---~~- 86 (290)
..++|||||||||+|+...++. ++. .+..+.|.+..... .+....|....... .. ....+.. .+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~-----~l~~e~G~~~~~~e----~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~ 200 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWL-----TLAQEEGKSPPPAF----ILRRVEGMKNEQAISEVLCWSRDPAELRRMA 200 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHH-----HHHHHcCCCCCHHH----HHHHhcCCCHHHHHHHHhhccCCHHHHHHHH
Confidence 6899999999999996664543 444 35566777654321 12233454433222 11 1111121 12
Q ss_pred ---HHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 87 ---HSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 87 ---~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
.+.+.+.. .....++||+.++|+.|+ ++++|+||+.+..+...++++|+..+|+.+++++++..
T Consensus 201 ~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~--------- 270 (381)
T PLN02575 201 TRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR--------- 270 (381)
T ss_pred HHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC---------
Confidence 22222222 134678999999999995 78999999999999999999999999999999998765
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+||+|++|..+++++|++|++|++|||+..|+++|+++|+.+|++.
T Consensus 271 ----------------------------------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~ 316 (381)
T PLN02575 271 ----------------------------------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA 316 (381)
T ss_pred ----------------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 7999999999999999999999999999999999999999999998
Q ss_pred CCCC---CCCcceeecCHhHHH-HHhHHHHHh
Q 036723 241 TSHR---AEGVDYALESIHNIK-EALPELWEV 268 (290)
Q Consensus 241 ~~~~---~~~ad~v~~sl~el~-~~l~~~~~~ 268 (290)
+++. ...++++++++.||. ..+..+...
T Consensus 317 ~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~ 348 (381)
T PLN02575 317 SKHPIYELGAADLVVRRLDELSIVDLKNLADI 348 (381)
T ss_pred CCCChhHhcCCCEEECCHHHHHHHHHhhhhhc
Confidence 7543 335899999999994 334444433
No 23
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=4.7e-24 Score=189.70 Aligned_cols=199 Identities=21% Similarity=0.259 Sum_probs=146.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH--cC-----CCCCH--
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA--IG-----YQFDC-- 83 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~--~~-----~~~~~-- 83 (290)
..+|+|+|||||||+|+...+..++. .+....|.+......+ ....|.....+.. +. ...+.
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 81 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVD-----RMLLELGRPPAGLEAV----RHWVGNGAPVLVRRALAGSIDHDGVDDEL 81 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHH-----HHHHHcCCCCCCHHHH----HHHhChhHHHHHHHHhcccccccCCCHHH
Confidence 35899999999999997777666655 3666777765433221 2222332221111 00 11121
Q ss_pred -HHHHHHHhhcC--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc
Q 036723 84 -DDFHSYVHGRL--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 84 -~~~~~~~~~~~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 157 (290)
+.+.+.+.+.. ......++||+.++|+.|+ ++++++||++...+...++++++..+|+.++++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~------ 155 (272)
T PRK13223 82 AEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ------ 155 (272)
T ss_pred HHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC------
Confidence 12222222211 1134678999999999985 78999999999999999999999999999999887654
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
.||+|+.|+.+++++|+++++|++|||+.+|+++|+++|+.++
T Consensus 156 -------------------------------------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i 198 (272)
T PRK13223 156 -------------------------------------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCV 198 (272)
T ss_pred -------------------------------------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 6999999999999999999999999999999999999999999
Q ss_pred EecCCCC------CCCcceeecCHhHHHHHhH
Q 036723 238 WVGTSHR------AEGVDYALESIHNIKEALP 263 (290)
Q Consensus 238 ~v~~~~~------~~~ad~v~~sl~el~~~l~ 263 (290)
++.++.. ...++++++++.+|.+++.
T Consensus 199 ~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 199 ALSYGYNHGRPIAEESPALVIDDLRALLPGCA 230 (272)
T ss_pred EEecCCCCchhhhhcCCCEEECCHHHHHHHHh
Confidence 9987642 3469999999999986544
No 24
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.91 E-value=7.3e-24 Score=177.98 Aligned_cols=174 Identities=18% Similarity=0.319 Sum_probs=127.0
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDDF 86 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~ 86 (290)
|.++|+|+||+||||+|+...+..++.+ ...+.|.+... . .+....|...... ...+...+.+.+
T Consensus 2 ~~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (188)
T PRK10725 2 YDRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDE-Q----AMVALNGSPTWRIAQAIIELNQADLDPHAL 71 (188)
T ss_pred CCcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 4458999999999999977766666663 44456665322 1 1222223322111 112222333333
Q ss_pred HHH----HhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 87 HSY----VHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 87 ~~~----~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
... +.... ...+.++|+ .++|..|+ ++++|+||+....+...++++|+..+|+.+++++++..
T Consensus 72 ~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~--------- 140 (188)
T PRK10725 72 AREKTEAVKSML-LDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH--------- 140 (188)
T ss_pred HHHHHHHHHHHH-hccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC---------
Confidence 221 22221 244567786 57888876 78999999999999999999999999999999998775
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.||+|+.|+.+++++|++|++|++|||+.+|+++|+++|+++|++.
T Consensus 141 ----------------------------------~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 141 ----------------------------------HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred ----------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 7999999999999999999999999999999999999999999875
No 25
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.91 E-value=3.9e-24 Score=184.82 Aligned_cols=124 Identities=28% Similarity=0.500 Sum_probs=113.1
Q ss_pred CCCCChhHHHHHHcCCCc--EEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 98 MLKPDPVLRNLLLSLPIR--KVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~~~--~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.++++|++.+.|+.++.+ ++++||+....+..++.++|+.++||.++++++++.
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~------------------------ 152 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV------------------------ 152 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc------------------------
Confidence 478899999999999844 999999999999999999999999999999998885
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCCC-----CCcc
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHRA-----EGVD 249 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~~-----~~ad 249 (290)
.||+|.+|+.+++++|++|+++++|||+. |||.+|+++||.+||+..+... ..++
T Consensus 153 -------------------~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~ 213 (229)
T COG1011 153 -------------------AKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPD 213 (229)
T ss_pred -------------------CCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCc
Confidence 79999999999999999999999999999 7889999999999999886532 4688
Q ss_pred eeecCHhHHHHHhHH
Q 036723 250 YALESIHNIKEALPE 264 (290)
Q Consensus 250 ~v~~sl~el~~~l~~ 264 (290)
+.+.++.++.+.+..
T Consensus 214 ~~i~~l~~l~~~~~~ 228 (229)
T COG1011 214 YEISSLAELLDLLER 228 (229)
T ss_pred eEEcCHHHHHHHHhh
Confidence 999999999987753
No 26
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.91 E-value=1.1e-23 Score=181.85 Aligned_cols=178 Identities=24% Similarity=0.353 Sum_probs=134.6
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH----HHHHc--CCC-CCHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA----GLRAI--GYQ-FDCDDF 86 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~----~~~~~--~~~-~~~~~~ 86 (290)
++|+|||||||||+|+...+..++. .++.++|++... ......+|.... .+... +.. .+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~-----~~~~~~g~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWL-----EALKEYGIEISD-----EEIRELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHH-----HHHHHcCCCCCH-----HHHHHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 4799999999999997666666666 366668877654 122233332211 11111 111 122222
Q ss_pred HHHHh--hcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccc
Q 036723 87 HSYVH--GRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQ 161 (290)
Q Consensus 87 ~~~~~--~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 161 (290)
..... .......+.+.||+.++|+.|+ +.+++.|+.++..+...+.++|+..+|+.+++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~---------- 140 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR---------- 140 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence 22111 1122356899999999999998 77899999999999999999999999999999988776
Q ss_pred ccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 162 DASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
+||+|+.|..+++++|++|++|++|+||.+++++|++|||.++++..
T Consensus 141 ---------------------------------~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 141 ---------------------------------GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred ---------------------------------CCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecC
Confidence 79999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 036723 242 SHR 244 (290)
Q Consensus 242 ~~~ 244 (290)
++.
T Consensus 188 ~~~ 190 (221)
T COG0637 188 GHD 190 (221)
T ss_pred CCC
Confidence 543
No 27
>PLN02940 riboflavin kinase
Probab=99.91 E-value=1.5e-23 Score=194.53 Aligned_cols=194 Identities=20% Similarity=0.295 Sum_probs=145.9
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH-----HHHcCCCCCHHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG-----LRAIGYQFDCDDFHS 88 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~ 88 (290)
.+|+|+||+||||+|+...+..++. .+..++|.+.... .+....|..... +...+.....+.+.+
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~-----~~~~~~G~~~~~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLK-----AFLVKYGKQWDGR-----EAQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHH-----HHHHHcCCCCCHH-----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 4899999999999997776666665 2455667654321 122333433221 111233333343332
Q ss_pred HHhhcC--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHH-hcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 89 YVHGRL--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLS-RLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 89 ~~~~~~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~-~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+.+ .+..+.++||+.++|+.|+ ++++|+||+.+..+...++ .+++..+|+.+++++++..
T Consensus 80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~----------- 148 (382)
T PLN02940 80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK----------- 148 (382)
T ss_pred HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC-----------
Confidence 222111 1245788999999999996 7899999999999998887 7899999999999998765
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
+||+|++|+.+++++|++|++|++|||+.+|+++|+++|+.+|++.++
T Consensus 149 --------------------------------~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g 196 (382)
T PLN02940 149 --------------------------------GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSI 196 (382)
T ss_pred --------------------------------CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 799999999999999999999999999999999999999999999876
Q ss_pred CC----CCCcceeecCHhHHHH
Q 036723 243 HR----AEGVDYALESIHNIKE 260 (290)
Q Consensus 243 ~~----~~~ad~v~~sl~el~~ 260 (290)
.. ...++++++++.|+..
T Consensus 197 ~~~~~~~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 197 PKQTHLYSSADEVINSLLDLQP 218 (382)
T ss_pred CcchhhccCccEEeCCHhHcCH
Confidence 42 4578999999998864
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.91 E-value=5.5e-23 Score=179.45 Aligned_cols=117 Identities=15% Similarity=0.289 Sum_probs=102.6
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.+.++||+.++|+.|+ ++++++||++.. ++.+|+..+|+.++++++.+.
T Consensus 111 ~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~------------------------ 161 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGR------------------------ 161 (238)
T ss_pred cCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCc------------------------
Confidence 4688999999999996 789999998764 478899999999999988775
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AE 246 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~ 246 (290)
.||+|++|+.+++++|++|++|++|||+. +|+.+|+++|+.++|+.++.. ..
T Consensus 162 -------------------~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~ 222 (238)
T PRK10748 162 -------------------SKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRL 222 (238)
T ss_pred -------------------CCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccC
Confidence 79999999999999999999999999995 999999999999999977532 13
Q ss_pred CcceeecCHhHHHHHh
Q 036723 247 GVDYALESIHNIKEAL 262 (290)
Q Consensus 247 ~ad~v~~sl~el~~~l 262 (290)
.|++.+.++.||.++|
T Consensus 223 ~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 223 LPHIEISRLASLTSLI 238 (238)
T ss_pred CCCEEECCHHHHHhhC
Confidence 5888999999998764
No 29
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.90 E-value=3.7e-23 Score=196.75 Aligned_cols=204 Identities=13% Similarity=0.197 Sum_probs=145.6
Q ss_pred CCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-HHcCCCCC---HHHHH
Q 036723 12 NQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-RAIGYQFD---CDDFH 87 (290)
Q Consensus 12 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~---~~~~~ 87 (290)
++|+++|+||+||||+|+...+..++.+.++++.....+...... ..+.+.+|...... ..+..... .+.+.
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~----~~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~ 313 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPI----DKYREIMGVPLPKVWEALLPDHSLEIREQTD 313 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCH----HHHHHHcCCChHHHHHHHhhhcchhHHHHHH
Confidence 455899999999999998888888888777663221111111111 12223334333221 11111111 11122
Q ss_pred HH----HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 88 SY----VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 88 ~~----~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
.. +.+.......+++||+.++|+.|+ ++++|+||+....+...++++++..+|+.++++++..
T Consensus 314 ~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~---------- 383 (459)
T PRK06698 314 AYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN---------- 383 (459)
T ss_pred HHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC----------
Confidence 22 222222235688999999999986 7899999999999999999999999999999988654
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.||+|+.+..++++++ +++|++|||+.+|+.+|+++|+.+|++.
T Consensus 384 ----------------------------------~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~ 427 (459)
T PRK06698 384 ----------------------------------SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCN 427 (459)
T ss_pred ----------------------------------CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEe
Confidence 3677789999998875 6899999999999999999999999998
Q ss_pred CCCC----CCCcceeecCHhHHHHHhHHH
Q 036723 241 TSHR----AEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 241 ~~~~----~~~ad~v~~sl~el~~~l~~~ 265 (290)
++.. ...++++++++.||.+++..+
T Consensus 428 ~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 428 FDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred CCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 7642 346899999999999877554
No 30
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.89 E-value=3.9e-22 Score=169.06 Aligned_cols=104 Identities=22% Similarity=0.467 Sum_probs=96.6
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..+.++||+.++|+.|+ ++++++||++...+...++++|+..+|+.++++++++.
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~---------------------- 146 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA---------------------- 146 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC----------------------
Confidence 34678999999999986 77999999999999999999999999999999998775
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.+||+.++.
T Consensus 147 ---------------------~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 147 ---------------------YKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred ---------------------CCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 7999999999999999999999999999999999999999999998754
No 31
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.89 E-value=2.1e-22 Score=180.31 Aligned_cols=119 Identities=13% Similarity=0.266 Sum_probs=99.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCc---ceeEEeecccCCCCCCccccccccccCCCCCc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDC---FERIISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~---f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
.+.++||+.++|+.|+ ++++|+||+.......+++.++...+ |+.+ ++++++.
T Consensus 142 ~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~-------------------- 200 (286)
T PLN02779 142 ALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPK-------------------- 200 (286)
T ss_pred CCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCC--------------------
Confidence 3689999999999885 78999999999999988887743333 3444 5555443
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC----CCC
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR----AEG 247 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~----~~~ 247 (290)
.||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++.++.. ...
T Consensus 201 -----------------------~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ 257 (286)
T PLN02779 201 -----------------------KKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSG 257 (286)
T ss_pred -----------------------CCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCC
Confidence 69999999999999999999999999999999999999999999977643 346
Q ss_pred cceeecCHhHHHH
Q 036723 248 VDYALESIHNIKE 260 (290)
Q Consensus 248 ad~v~~sl~el~~ 260 (290)
++++++++.++..
T Consensus 258 ad~vi~~~~~l~~ 270 (286)
T PLN02779 258 ADAVFDCLGDVPL 270 (286)
T ss_pred CcEEECChhhcch
Confidence 8999999998864
No 32
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.89 E-value=2.5e-22 Score=168.06 Aligned_cols=170 Identities=21% Similarity=0.344 Sum_probs=121.3
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHHHH--
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDDFH-- 87 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~-- 87 (290)
+|+|+||+||||+|+...+..++.+ +.+++|.+... .......|...... ...+...+.+.+.
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK-----QYNTSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH-----HHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 5899999999999976655555552 44556665321 11111123222211 1111122222221
Q ss_pred -----HHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcccc
Q 036723 88 -----SYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLV 159 (290)
Q Consensus 88 -----~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 159 (290)
+.+.+.+......++||+.++|+.|+ ++++++||+ ..+..+++++|+..+|+.+++++..+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~-------- 140 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE-------- 140 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence 22222222245789999999999885 778999988 667889999999999999999887664
Q ss_pred ccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 160 DQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.||+|++|+.+++++|++++++++|||+.+|+++|+++|+++|++
T Consensus 141 -----------------------------------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 141 -----------------------------------GKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred -----------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 699999999999999999999999999999999999999999875
No 33
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.88 E-value=1e-21 Score=167.08 Aligned_cols=173 Identities=18% Similarity=0.260 Sum_probs=120.9
Q ss_pred cEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHH--HHHHHHHHH-------H----cccHH---------H
Q 036723 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVP--ELCVSLYKF-------Y----GTTLA---------G 73 (290)
Q Consensus 16 k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~--~~~~~~~~~-------~----g~~~~---------~ 73 (290)
|+|+||+||||+|+...+..++.+ +....|++..... ......++. + |.+.. .
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 589999999999988878777763 4555676543211 010111111 1 22211 1
Q ss_pred HHHcCCCCCHHHH---HHHHhh-cCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEee
Q 036723 74 LRAIGYQFDCDDF---HSYVHG-RLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISF 146 (290)
Q Consensus 74 ~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~ 146 (290)
+...+. .+...+ .+.+.+ ........++||+.++|..|+ ++++|+||+.... ...++++|+..+|+.++++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 76 FGRAGV-PDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHhcCC-CCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHHhcceEEee
Confidence 111121 111112 121211 111234578999999999986 6899999987754 7788999999999999999
Q ss_pred cccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cc
Q 036723 147 ETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RN 225 (290)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~D 225 (290)
++++. +||+|+.|+.+++++|++|++|++|||+. +|
T Consensus 154 ~~~~~-------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~D 190 (203)
T TIGR02252 154 YEVGA-------------------------------------------EKPDPKIFQEALERAGISPEEALHIGDSLRND 190 (203)
T ss_pred cccCC-------------------------------------------CCCCHHHHHHHHHHcCCChhHEEEECCCchHH
Confidence 88765 79999999999999999999999999998 89
Q ss_pred hHHHHhcCCeEEE
Q 036723 226 LETGKRLGLHTVW 238 (290)
Q Consensus 226 i~~a~~aGi~~i~ 238 (290)
+.+|+++|+.+||
T Consensus 191 i~~A~~aG~~~i~ 203 (203)
T TIGR02252 191 YQGARAAGWRALL 203 (203)
T ss_pred HHHHHHcCCeeeC
Confidence 9999999999885
No 34
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.88 E-value=2.4e-22 Score=168.11 Aligned_cols=169 Identities=24% Similarity=0.271 Sum_probs=119.3
Q ss_pred EEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-----HHHHcCCCCCHHHHH----
Q 036723 17 CLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-----GLRAIGYQFDCDDFH---- 87 (290)
Q Consensus 17 ~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~---- 87 (290)
+|+||+||||+|+...+..++. .+++.+|.+.... . .. ...|.+.. .+...+...+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~-----~~~~~~g~~~~~~-~-~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWK-----ALADELGIPFDEE-F-NE---SLKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHH-----HHHHHcCCCCCHH-H-HH---HhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 5899999999997776666665 3556667653221 1 01 11121111 111123222322221
Q ss_pred ---HHHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 88 ---SYVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 88 ---~~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
+.+.+... .....++||+.++|+.|+ ++++++||+.. ....++++++..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~--------- 139 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK--------- 139 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC---------
Confidence 11222111 123578999999999996 77899998643 4568999999999999999887765
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.||+|+.|+.++++++++|++|++|||+.+|+++|+++|+.+|+++
T Consensus 140 ----------------------------------~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 140 ----------------------------------GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred ----------------------------------CCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 7999999999999999999999999999999999999999999874
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.87 E-value=7.1e-23 Score=168.47 Aligned_cols=168 Identities=29% Similarity=0.521 Sum_probs=122.6
Q ss_pred EEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHHHHHHHhh
Q 036723 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDDFHSYVHG 92 (290)
Q Consensus 18 viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~ 92 (290)
|+||+||||+++...+...+. ..+.+.++.+.. . ..+...++...... ...+ .....+.+.+.+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~----~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 69 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQ----RLALEEFGLEIS-A----EELRELFGKSYEEALERLLERFG--IDPEEIQELFRE 69 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHH----HHHHHHTTHHHH-H----HHHHHHTTSHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHH----HHHHHHhCCCCC-H----HHHHHHhCCCHHHHHHHhhhccc--hhHHHHHHHhhh
Confidence 799999999995553444443 334555555411 1 11211122111111 0011 012233333333
Q ss_pred cCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCC
Q 036723 93 RLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 93 ~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
........++||+.++|+.|+ ++++++||++...+...++++|+..+|+.++++++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------ 131 (176)
T PF13419_consen 70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS------------------ 131 (176)
T ss_dssp HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS------------------
T ss_pred hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh------------------
Confidence 321256789999999999986 88999999999999999999999999999999998775
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.||+++.|+.+++++|++|++|++|||+..|+++|+++|+.+|++
T Consensus 132 -------------------------~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 132 -------------------------RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp -------------------------STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred -------------------------hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 799999999999999999999999999999999999999999986
No 36
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.86 E-value=5.3e-22 Score=165.43 Aligned_cols=97 Identities=33% Similarity=0.518 Sum_probs=88.5
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+.++||+.++|+.|+ ++++++||+.... .....++|+..+|+.++++++.+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~------------------------ 138 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR------------------------ 138 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC------------------------
Confidence 688999999999885 6799999999888 666677999999999999887664
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
+||+|+.|+.+++++|++|++|++|||+..|+++|+++|+.+|++
T Consensus 139 -------------------~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 139 -------------------GKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred -------------------CCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 799999999999999999999999999999999999999999875
No 37
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.86 E-value=3.7e-21 Score=162.95 Aligned_cols=181 Identities=18% Similarity=0.175 Sum_probs=120.9
Q ss_pred CccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHH-H-HHHcCCCCCHHH---HHH
Q 036723 14 KYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLA-G-LRAIGYQFDCDD---FHS 88 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~---~~~ 88 (290)
|+|+|+||+||||+|+...+ . .+.+..|++.. .+ ....|.... . ....+ .+... +.+
T Consensus 1 m~k~viFDlDGTLiD~~~~~----~-----~~~~~~g~~~~---~~----~~~~g~~~~~~~~~~~~--~~~~~~~~~~~ 62 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQSGL----P-----YFAQKYNIPTD---HI----LKMIQDERFRDPGELFG--CDQELAKKLIE 62 (197)
T ss_pred CCcEEEEecCCceEchhhcc----H-----HHHHhcCCCHH---HH----HHHHhHhhhcCHHHHhc--ccHHHHHHHhh
Confidence 38999999999999943322 2 24456776532 11 111121100 0 01111 11211 222
Q ss_pred HHhhcCCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCc----ceeEEeecccCCCCCCccccccc
Q 036723 89 YVHGRLPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDC----FERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 89 ~~~~~~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~----f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+..........++||+.++|+.|+ ++.+++||+........+..+++..+ |+.+++.+.
T Consensus 63 ~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------- 128 (197)
T PHA02597 63 KYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------- 128 (197)
T ss_pred hhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc--------------
Confidence 2221111244678999999999996 56788888877766666777777654 455555553
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc--CCeEEEec
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL--GLHTVWVG 240 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a--Gi~~i~v~ 240 (290)
.||+|+.++.+++++| +++++||||+.+|+.+|+++ |+++|++.
T Consensus 129 --------------------------------~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~ 174 (197)
T PHA02597 129 --------------------------------DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHML 174 (197)
T ss_pred --------------------------------CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEec
Confidence 3677899999999999 88999999999999999999 99999999
Q ss_pred CCCCCC--CcceeecCHhHHHH
Q 036723 241 TSHRAE--GVDYALESIHNIKE 260 (290)
Q Consensus 241 ~~~~~~--~ad~v~~sl~el~~ 260 (290)
++.... .+++.++|+.|+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 175 RGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred chhhccccchhhhhccHHHHhc
Confidence 887533 46688888888764
No 38
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.86 E-value=9.5e-21 Score=194.93 Aligned_cols=204 Identities=19% Similarity=0.295 Sum_probs=148.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHH-----HcCC-CCCHHH-
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLR-----AIGY-QFDCDD- 85 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~-~~~~~~- 85 (290)
+++|+|+|||||||+|+...+..++. .++++.|++.... .+...+|.....+. ..+. ..+.+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~-----~~~~~~G~~it~e-----~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~ 142 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAV-----DVFAEMGVEVTVE-----DFVPFMGTGEANFLGGVASVKGVKGFDPDAA 142 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHH-----HHHHHcCCCCCHH-----HHHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 35899999999999997766666666 3455667754321 12223343332211 1111 122222
Q ss_pred ---HHHHHhhcCC-CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC-CcceeEEeecccCCCCCCcc
Q 036723 86 ---FHSYVHGRLP-YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE-DCFERIISFETLNSTDKGTV 157 (290)
Q Consensus 86 ---~~~~~~~~~~-~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~~~~~~ 157 (290)
+.+.+.+... .....++||+.++|+.|+ ++++|+||.....+...++++++. .+|+.+++++++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~------ 216 (1057)
T PLN02919 143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN------ 216 (1057)
T ss_pred HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc------
Confidence 2222222211 122347999999999996 789999999999999999999996 78999999988765
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+||+|++|+.+++++|++|++|++|||+.+|+++|+++||.+|
T Consensus 217 -------------------------------------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I 259 (1057)
T PLN02919 217 -------------------------------------LKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCI 259 (1057)
T ss_pred -------------------------------------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 7999999999999999999999999999999999999999999
Q ss_pred EecCCCC-----CCCcceeecCHhHHHHHhHHHHHhhCC
Q 036723 238 WVGTSHR-----AEGVDYALESIHNIKEALPELWEVAGE 271 (290)
Q Consensus 238 ~v~~~~~-----~~~ad~v~~sl~el~~~l~~~~~~~~~ 271 (290)
++.++.. ..+++++++++.++. +..++...++
T Consensus 260 ~v~~~~~~~~L~~~~a~~vi~~l~el~--~~~~~~~~~~ 296 (1057)
T PLN02919 260 AVTTTLSEEILKDAGPSLIRKDIGNIS--LSDILTGGSD 296 (1057)
T ss_pred EECCCCCHHHHhhCCCCEEECChHHCC--HHHHHhcCCC
Confidence 9988753 457899999999974 3444444433
No 39
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.85 E-value=8e-21 Score=162.55 Aligned_cols=102 Identities=21% Similarity=0.272 Sum_probs=87.9
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHH--HHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTH--AARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
.+.++||+.++|+.|+ ++++++||+.... ....+..+++..+|+.++++++.+.
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------------- 150 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL--------------------- 150 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC---------------------
Confidence 4678999999999986 7899999986544 3333445678889999999887764
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.||+|++|+.+++++|++|++|++|||+..|+.+|+++|+.+|++.++
T Consensus 151 ----------------------~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 151 ----------------------RKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred ----------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 799999999999999999999999999999999999999999998654
No 40
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.84 E-value=9.8e-20 Score=154.60 Aligned_cols=119 Identities=18% Similarity=0.337 Sum_probs=97.9
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHh-cCCCCcceeEEeecccCCCC
Q 036723 78 GYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSR-LGLEDCFERIISFETLNSTD 153 (290)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~~ 153 (290)
+...+.+.+...+.+.. ..++||+.++|+.|+ ++++++||++.......+.. .++..+|+.++++++++.
T Consensus 66 ~~~~~~~~~~~~~~~~~----~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~-- 139 (199)
T PRK09456 66 ALSLSYEQFAHGWQAVF----VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM-- 139 (199)
T ss_pred CCCCCHHHHHHHHHHHH----hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC--
Confidence 33334444444443322 357899999999985 78999999998877766655 477889999999998876
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
+||+|+.|+.+++++|++|++|++|||+..|+.+|+++|
T Consensus 140 -----------------------------------------~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG 178 (199)
T PRK09456 140 -----------------------------------------RKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALG 178 (199)
T ss_pred -----------------------------------------CCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcC
Confidence 799999999999999999999999999999999999999
Q ss_pred CeEEEecCCC
Q 036723 234 LHTVWVGTSH 243 (290)
Q Consensus 234 i~~i~v~~~~ 243 (290)
+.++++.++.
T Consensus 179 ~~~i~~~~~~ 188 (199)
T PRK09456 179 ITSILVTDKQ 188 (199)
T ss_pred CEEEEecCCc
Confidence 9999997754
No 41
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.84 E-value=4e-20 Score=159.03 Aligned_cols=131 Identities=16% Similarity=0.201 Sum_probs=96.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.++++||+.++|+.|+ ++++|+||+....+..+++.+|+..+|...+..++-..
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~----------------------- 139 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKL----------------------- 139 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEE-----------------------
Confidence 3578999999999986 78999999999999999999999888865443331100
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeec-
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALE- 253 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~- 253 (290)
.+.. ..+...++|++..++.+++++++++++|++|||+.+|+++|+.+|+.+++.+.......+++++.
T Consensus 140 -~~~~---------~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 140 -TGLV---------EGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINK 209 (219)
T ss_pred -EEEe---------cCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCC
Confidence 0000 00001147789999999999999999999999999999999999998655332222456788877
Q ss_pred -CHhHHHHH
Q 036723 254 -SIHNIKEA 261 (290)
Q Consensus 254 -sl~el~~~ 261 (290)
++.++..+
T Consensus 210 ~~~~~~~~~ 218 (219)
T TIGR00338 210 KDLTDILPL 218 (219)
T ss_pred CCHHHHHhh
Confidence 45666553
No 42
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.82 E-value=1.9e-19 Score=152.63 Aligned_cols=88 Identities=23% Similarity=0.256 Sum_probs=78.6
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDD 177 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (290)
+.++..++|+.|+ ++++|+||++...+...++++|+..+|+.++++++..
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------------------------- 159 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP--------------------------- 159 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC---------------------------
Confidence 4445577777775 7899999999999999999999999999999988654
Q ss_pred cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc
Q 036723 178 YCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
.||+|+.+..+++++|+++++|++|||+.+|+++|+++
T Consensus 160 -----------------~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 160 -----------------PKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred -----------------CCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 49999999999999999999999999999999999875
No 43
>PLN02811 hydrolase
Probab=99.81 E-value=1.1e-19 Score=156.84 Aligned_cols=185 Identities=18% Similarity=0.210 Sum_probs=128.6
Q ss_pred cCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCC--CCHHHHHHH---Hh
Q 036723 22 LDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQ--FDCDDFHSY---VH 91 (290)
Q Consensus 22 lDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~--~~~~~~~~~---~~ 91 (290)
|||||+|+...+..++. .+.+.+|++... .......|...... ...+.. ...+.+... +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~-----~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQE-----KILARYGKTFDW-----SLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHH-----HHHHHcCCCCCH-----HHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999997766666666 345666765321 11222334433211 111221 122222221 11
Q ss_pred hcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHH-HHhcCCCCcceeEEeec--ccCCCCCCcccccccccc
Q 036723 92 GRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARV-LSRLGLEDCFERIISFE--TLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 92 ~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~-l~~~gl~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~ 165 (290)
... .....++||+.++|+.|+ ++++|+||..+...... .+..++..+|+.+++++ +++.
T Consensus 71 ~~~-~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~-------------- 135 (220)
T PLN02811 71 QDL-FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ-------------- 135 (220)
T ss_pred HHH-HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------
Confidence 111 134678999999999986 78999999987655543 44457788999999988 6654
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC---CCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN---INPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~---~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
+||+|++|..++++++ ++|++|++|||+.+|+++|+++|+++|++.++
T Consensus 136 -----------------------------~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~ 186 (220)
T PLN02811 136 -----------------------------GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDP 186 (220)
T ss_pred -----------------------------CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCC
Confidence 6999999999999997 99999999999999999999999999999776
Q ss_pred CC----CCCcceeecCHhHHHH
Q 036723 243 HR----AEGVDYALESIHNIKE 260 (290)
Q Consensus 243 ~~----~~~ad~v~~sl~el~~ 260 (290)
.. ..+++++++++.|+..
T Consensus 187 ~~~~~~~~~~d~vi~~~~e~~~ 208 (220)
T PLN02811 187 RLDKSYCKGADQVLSSLLDFKP 208 (220)
T ss_pred CCcHhhhhchhhHhcCHhhCCH
Confidence 42 3467888888887653
No 44
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.81 E-value=8.4e-20 Score=151.60 Aligned_cols=89 Identities=24% Similarity=0.342 Sum_probs=81.9
Q ss_pred CCCCCChhHHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 97 MMLKPDPVLRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
..+.++||+.++|+ +++|+||++...+...++++++..+|+.++++++++.
T Consensus 87 ~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------- 137 (175)
T TIGR01493 87 KNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA------------------------- 137 (175)
T ss_pred hcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC-------------------------
Confidence 34678999999999 4789999999999999999999999999999987765
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
.||+|+.|+.+++++|++|++|++|||+.+|+.+|+++
T Consensus 138 ------------------~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 138 ------------------YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred ------------------CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 79999999999999999999999999999999999864
No 45
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.79 E-value=9e-19 Score=142.37 Aligned_cols=151 Identities=20% Similarity=0.320 Sum_probs=108.5
Q ss_pred EEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhcCCC
Q 036723 17 CLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLPY 96 (290)
Q Consensus 17 ~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (290)
+|+||+||||+|+...+..++.+.++ +++.+ .. .+....|.....+... ...+.+.. . . .
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~-----~~~~~---~~----~~~~~~g~~~~~~~~~-----~~~~~~~~-~-~-~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLE-----EFGED---FQ----ALKALRGLAEELLYRI-----ATSFEELL-G-Y-D 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHH-----Hhccc---HH----HHHHHHccChHHHHHH-----HHHHHHHh-C-c-c
Confidence 58999999999976666666664444 33432 11 1111223322222111 01122211 1 1 1
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
.....+||+.++|+.|+ ++++++||+........++.+ +..+|+.++++++.+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~----------------------- 116 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG----------------------- 116 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-----------------------
Confidence 24456799999999984 789999999999999999988 788899998877654
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
+||+|+.|+.+++++|+++ +|++|||+.+|+++|+++|
T Consensus 117 ---------------------~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 117 ---------------------AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred ---------------------CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 5999999999999999999 9999999999999999987
No 46
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.79 E-value=1e-18 Score=146.29 Aligned_cols=125 Identities=21% Similarity=0.226 Sum_probs=96.1
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
+.++||+.++|+.|+ ++++|+||... ......++++|+ .|+.++.+......
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~-------- 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPED-------- 97 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCC--------
Confidence 356789999999885 78999999863 233445666776 37777654321100
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.. ..+||+|.+|..+++++|++++++++|||+.+|+.+|+++|+.++++.
T Consensus 98 --------------------------~~----~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~ 147 (181)
T PRK08942 98 --------------------------GC----DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR 147 (181)
T ss_pred --------------------------CC----cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 00 017999999999999999999999999999999999999999999997
Q ss_pred CCCC-----CCCc--ceeecCHhHHHHHhH
Q 036723 241 TSHR-----AEGV--DYALESIHNIKEALP 263 (290)
Q Consensus 241 ~~~~-----~~~a--d~v~~sl~el~~~l~ 263 (290)
++.. ...+ +++++++.++.+++.
T Consensus 148 ~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 148 TGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred CCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 7643 2345 899999999988664
No 47
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.78 E-value=2e-18 Score=147.94 Aligned_cols=184 Identities=17% Similarity=0.210 Sum_probs=126.8
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH----------cc-----cHHHHH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFY----------GT-----TLAGLR 75 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~----------g~-----~~~~~~ 75 (290)
..+.+++|+||++|||+.........+. .+.+.+|++... ..+...+.+.+ |. +...+.
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~~~~~y~-----~i~~~~gl~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww 76 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPPVMEVYC-----EIAEAYGLEYDD-SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWW 76 (237)
T ss_pred cccceEEEEEeCCCceeecCCccHHHHH-----HHHHHhCCCCCH-HHHhHhhhHHHHhhcccCCcccccCCcccHHHHH
Confidence 4567999999999999986666666665 467778887443 22222222221 11 111111
Q ss_pred H-c---CCCCC----HHHHHHHHhhc-CCC---CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc
Q 036723 76 A-I---GYQFD----CDDFHSYVHGR-LPY---MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF 140 (290)
Q Consensus 76 ~-~---~~~~~----~~~~~~~~~~~-~~~---~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f 140 (290)
. + .+... .+.....+..+ +.. ..-...+++.++++.|+ ..++++||.++... ..+..+++..+|
T Consensus 77 ~~lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~f 155 (237)
T KOG3085|consen 77 PKLVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYF 155 (237)
T ss_pred HHHHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhh
Confidence 0 0 00000 00011000011 111 23355678889999997 46788999877665 788899999999
Q ss_pred eeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEc
Q 036723 141 ERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFD 220 (290)
Q Consensus 141 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iG 220 (290)
|.++.|+..+. .||+|++|+.+++++++.|++|++||
T Consensus 156 D~vv~S~e~g~-------------------------------------------~KPDp~If~~al~~l~v~Pee~vhIg 192 (237)
T KOG3085|consen 156 DFVVESCEVGL-------------------------------------------EKPDPRIFQLALERLGVKPEECVHIG 192 (237)
T ss_pred hhhhhhhhhcc-------------------------------------------CCCChHHHHHHHHHhCCChHHeEEec
Confidence 99999999886 79999999999999999999999999
Q ss_pred CCc-cchHHHHhcCCeEEEecCCCC
Q 036723 221 DSI-RNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 221 Ds~-~Di~~a~~aGi~~i~v~~~~~ 244 (290)
|+. ||+++|+++||.++.+.++..
T Consensus 193 D~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 193 DLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred CccccccHhHHHcCCEEEEEccccc
Confidence 999 899999999999999976543
No 48
>PLN02954 phosphoserine phosphatase
Probab=99.78 E-value=9e-18 Score=144.91 Aligned_cols=201 Identities=16% Similarity=0.178 Sum_probs=122.4
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHH-HHH-cC-CCCCHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAG-LRA-IG-YQFDCDDFHSY 89 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~-~~-~~~~~~~~~~~ 89 (290)
+++|+|+||+||||++. ..+ . .+.+++|.+.... .....+. ........ +.. .+ .....+.+.+.
T Consensus 10 ~~~k~viFDfDGTL~~~-~~~----~-----~~~~~~g~~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T PLN02954 10 RSADAVCFDVDSTVCVD-EGI----D-----ELAEFCGAGEAVA-EWTAKAM-GGSVPFEEALAARLSLFKPSLSQVEEF 77 (224)
T ss_pred ccCCEEEEeCCCcccch-HHH----H-----HHHHHcCChHHHH-HHHHHHH-CCCCCHHHHHHHHHHHcCCCHHHHHHH
Confidence 45899999999999993 222 2 3555666542211 1111111 00011111 111 00 11223334444
Q ss_pred HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC--CcceeEEeecccCCCCCCccccccccc
Q 036723 90 VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE--DCFERIISFETLNSTDKGTVLVDQDAS 164 (290)
Q Consensus 90 ~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~~~~~~ 164 (290)
+.. ....++||+.++|+.|+ ++++|+|++....++.+++.+|+. .+|...+..+.-+...+
T Consensus 78 ~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g---------- 143 (224)
T PLN02954 78 LEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAG---------- 143 (224)
T ss_pred HHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEEC----------
Confidence 433 12468899999999885 679999999999999999999986 35654333221110000
Q ss_pred cCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 165 ESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
... ..+.-.+++|++.++.+++++|. +++++|||+.+|+.+++++|+.++..-++..
T Consensus 144 ----------------~~~-----~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~ 200 (224)
T PLN02954 144 ----------------FDE-----NEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQ 200 (224)
T ss_pred ----------------ccC-----CCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCc
Confidence 000 00000157788999999999885 6899999999999999998887654322221
Q ss_pred -----CCCcceeecCHhHHHHHh
Q 036723 245 -----AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 -----~~~ad~v~~sl~el~~~l 262 (290)
...++++++++.+|.+++
T Consensus 201 ~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 201 VREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred cCHHHHhcCCEEECCHHHHHHhh
Confidence 335899999999998754
No 49
>PRK06769 hypothetical protein; Validated
Probab=99.77 E-value=1.9e-18 Score=143.56 Aligned_cols=121 Identities=16% Similarity=0.174 Sum_probs=93.1
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchH--------HHHHHHHhcCCCCcceeEE-eecccCCCCCCccccccccccC
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKT--------HAARVLSRLGLEDCFERII-SFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~--------~~~~~l~~~gl~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
+.++||+.++|+.|+ ++++|+||.... .....++.+|+..+|.... .++....
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------- 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------- 91 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC---------------
Confidence 356799999999885 789999998642 1333466666544332221 2222222
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-- 244 (290)
.||+|+.|..++++++++|++|++|||+.+|+.+|+++|+.+|++.++..
T Consensus 92 ----------------------------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~ 143 (173)
T PRK06769 92 ----------------------------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYD 143 (173)
T ss_pred ----------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCch
Confidence 79999999999999999999999999999999999999999999987642
Q ss_pred ----------CCCcceeecCHhHHHHHh
Q 036723 245 ----------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 ----------~~~ad~v~~sl~el~~~l 262 (290)
...++++++++.||.++|
T Consensus 144 ~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 144 ALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred hhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 235889999999998754
No 50
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.77 E-value=3.5e-18 Score=142.40 Aligned_cols=128 Identities=17% Similarity=0.176 Sum_probs=95.0
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEeecccCCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVD 160 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 160 (290)
+.++||+.++|+.|+ ++++++||.+. ......+..+++. |+.++.+......
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~-------- 94 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG-------- 94 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc--------
Confidence 457789999999986 78999999874 3444556666666 7776654321100
Q ss_pred cccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE-EEe
Q 036723 161 QDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT-VWV 239 (290)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~-i~v 239 (290)
. .........+||+|++|..+++++|+++++|+||||+.+|+++|+++|+.+ +++
T Consensus 95 ---------~---------------~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v 150 (176)
T TIGR00213 95 ---------V---------------EEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLV 150 (176)
T ss_pred ---------c---------------ccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEE
Confidence 0 000000012799999999999999999999999999999999999999998 798
Q ss_pred cCCCC-----CCCcceeecCHhHHHH
Q 036723 240 GTSHR-----AEGVDYALESIHNIKE 260 (290)
Q Consensus 240 ~~~~~-----~~~ad~v~~sl~el~~ 260 (290)
.++.. ..+|+++++++.||.+
T Consensus 151 ~~g~~~~~~~~~~ad~~i~~~~el~~ 176 (176)
T TIGR00213 151 RTGKPITPEAENIADWVLNSLADLPQ 176 (176)
T ss_pred ecCCcccccccccCCEEeccHHHhhC
Confidence 87753 2468999999999863
No 51
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.76 E-value=1.5e-17 Score=140.67 Aligned_cols=114 Identities=16% Similarity=0.151 Sum_probs=87.8
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..+.++||+.++|+.|+ ++++|+|++....+..+++.+|+..+|...+..++.+..
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--------------------- 135 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--------------------- 135 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE---------------------
Confidence 34578999999999985 789999999999999999999998888776655433210
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.|.... ....++++..++.+++++|++++++++|||+.+|+++|+.+|++++....++
T Consensus 136 -------~p~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 136 -------QPDGIV-----RVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred -------ecceee-----EEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 000000 0012456688999999999999999999999999999999999877666554
No 52
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.75 E-value=1.3e-17 Score=141.84 Aligned_cols=195 Identities=15% Similarity=0.114 Sum_probs=121.5
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHH-HHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhc
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPEL-CVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGR 93 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (290)
+++|+||+||||++ . . +. .+..++|++....... ...+...++.....+... ..+.+++....
T Consensus 1 ~~~v~FD~DGTL~~--~-~---~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~i~~~~--- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVP--E-I---WI-----AFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEH--GLGLADIQEVI--- 64 (205)
T ss_pred CeEEEEeCCCCChh--h-H---HH-----HHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHc--CCCHHHHHHHH---
Confidence 36899999999994 1 1 22 2445666543210000 000111112222222211 23344444333
Q ss_pred CCCCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCc
Q 036723 94 LPYMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 94 ~~~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
..+.++||+.++|..|+ ++++++|++....+...++++|+..+|+..+...+.+.-.+
T Consensus 65 ---~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~----------------- 124 (205)
T PRK13582 65 ---ATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITG----------------- 124 (205)
T ss_pred ---HhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEEC-----------------
Confidence 34578899999999886 78999999999999999999999988877655432111000
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD 249 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad 249 (290)
..++.|.....+++.++..+++|++||||.+|+.+++++|+.. .+++++. ...++
T Consensus 125 ----------------------~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v-~~~~~~~~~~~~~~ 181 (205)
T PRK13582 125 ----------------------YDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI-LFRPPANVIAEFPQ 181 (205)
T ss_pred ----------------------ccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCE-EECCCHHHHHhCCc
Confidence 0112223334555566667789999999999999999999854 4444432 23455
Q ss_pred e-eecCHhHHHHHhHHHHHh
Q 036723 250 Y-ALESIHNIKEALPELWEV 268 (290)
Q Consensus 250 ~-v~~sl~el~~~l~~~~~~ 268 (290)
+ +++++.+|.+.+.+....
T Consensus 182 ~~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 182 FPAVHTYDELLAAIDKASAR 201 (205)
T ss_pred ccccCCHHHHHHHHHHHHhh
Confidence 5 899999999888876543
No 53
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.74 E-value=3.3e-17 Score=139.90 Aligned_cols=195 Identities=19% Similarity=0.216 Sum_probs=144.7
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHH-----HHcCCCCCHHH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGL-----RAIGYQFDCDD 85 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~ 85 (290)
....+.+++||+||||+|+...++..+. -++.++|.+.... ...+..|...... ......++.++
T Consensus 6 ~~~~~~~~lfD~dG~lvdte~~y~~~~~-----~~~~~ygk~~~~~-----~~~~~mG~~~~eaa~~~~~~~~dp~s~ee 75 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDTEDLYTEAWQ-----ELLDRYGKPYPWD-----VKVKSMGKRTSEAARLFVKKLPDPVSREE 75 (222)
T ss_pred cccceeeEEEecCCcEEecHHHHHHHHH-----HHHHHcCCCChHH-----HHHHHcCCCHHHHHHHHHhhcCCCCCHHH
Confidence 4556889999999999997777776666 4677777644331 2222345433322 22345667777
Q ss_pred HHHHHhhcCC--CCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcC-CCCcceeEEee--cccCCCCCCcc
Q 036723 86 FHSYVHGRLP--YMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLG-LEDCFERIISF--ETLNSTDKGTV 157 (290)
Q Consensus 86 ~~~~~~~~~~--~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~g-l~~~f~~i~~~--~~~~~~~~~~~ 157 (290)
|....+..+. .....+.||+.+++..|+ +++.++|+..+...+..+++++ +...|..++.. .++..
T Consensus 76 ~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~------ 149 (222)
T KOG2914|consen 76 FNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN------ 149 (222)
T ss_pred HHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC------
Confidence 7655444321 256788999999999996 7899999999999999999887 66778877763 32332
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHhcCCeE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP-RKTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+||+|++|..+++++|.++ +.|++|+|+...+++|+++||.+
T Consensus 150 -------------------------------------gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~v 192 (222)
T KOG2914|consen 150 -------------------------------------GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQV 192 (222)
T ss_pred -------------------------------------CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeE
Confidence 7999999999999999998 99999999999999999999999
Q ss_pred EEecCCCC----CCCcceeecCHhHH
Q 036723 237 VWVGTSHR----AEGVDYALESIHNI 258 (290)
Q Consensus 237 i~v~~~~~----~~~ad~v~~sl~el 258 (290)
|++..... ..+++.+++++.+.
T Consensus 193 i~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 193 VGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred EEecCCCcchhhhhccceeccccccc
Confidence 99988432 44566666665543
No 54
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.74 E-value=4.4e-17 Score=147.61 Aligned_cols=132 Identities=15% Similarity=0.126 Sum_probs=95.6
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.+++.||+.++++.|+ ++++|+|++........++++++...+.+.+...+-..
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l----------------------- 235 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL----------------------- 235 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE-----------------------
Confidence 4678999999998886 78999999999999999999998765543222111000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecC
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~s 254 (290)
.+. .....+.+|||++.++.+++++|+++++|++|||+.||+.|++.||+.+++...+.-+..|++++++
T Consensus 236 -tg~---------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~~ 305 (322)
T PRK11133 236 -TGN---------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIRH 305 (322)
T ss_pred -EeE---------ecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEecC
Confidence 000 0000112689999999999999999999999999999999999999988773333336678888763
Q ss_pred --HhHHHHHh
Q 036723 255 --IHNIKEAL 262 (290)
Q Consensus 255 --l~el~~~l 262 (290)
++.+.-+|
T Consensus 306 ~~l~~~l~~~ 315 (322)
T PRK11133 306 ADLMGVLCIL 315 (322)
T ss_pred cCHHHHHHHh
Confidence 44444433
No 55
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.74 E-value=1.3e-17 Score=143.80 Aligned_cols=127 Identities=15% Similarity=0.106 Sum_probs=92.2
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC--cc--eeEEeecccCCCCCCccccccccccCCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED--CF--ERIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~--~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
..+.++||+.++|+.|+ ++++|+|++....+..+++++ +.. .+ +..+..+....
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~------------------ 131 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI------------------ 131 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE------------------
Confidence 34688999999999886 789999999999999999988 643 11 11222221111
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHH----------HHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEA----------FEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~----------~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.||+|.. ...++++++.++++|++||||.+|+.+|++||+.++ -
T Consensus 132 -------------------------~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~ 185 (219)
T PRK09552 132 -------------------------TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-R 185 (219)
T ss_pred -------------------------eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-H
Confidence 2333322 235778889999999999999999999999999444 2
Q ss_pred cC--CC--CCCCcceeecCHhHHHHHhHHHHHh
Q 036723 240 GT--SH--RAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 240 ~~--~~--~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
.. .+ ....+.+.++++.|+.+.|.++|+.
T Consensus 186 ~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~~~ 218 (219)
T PRK09552 186 DFLITKCEELGIPYTPFETFHDVQTELKHLLEV 218 (219)
T ss_pred HHHHHHHHHcCCCccccCCHHHHHHHHHHHhcc
Confidence 11 11 2345788899999999999998875
No 56
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.73 E-value=6e-18 Score=136.91 Aligned_cols=99 Identities=19% Similarity=0.291 Sum_probs=79.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCch---------------HHHHHHHHhcCCCCcceeEEe----ecccCCCCCCcc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADK---------------THAARVLSRLGLEDCFERIIS----FETLNSTDKGTV 157 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~---------------~~~~~~l~~~gl~~~f~~i~~----~~~~~~~~~~~~ 157 (290)
.++||+.++|+.|+ ++++|+||.++ ..+...++++++... ..++. ++..+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~~~~------ 99 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADNCSC------ 99 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCCCCC------
Confidence 56789999988885 88999999874 456667888887621 12222 222222
Q ss_pred ccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 158 LVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
.||+|++|+.+++++|+++++|++|||+..|+++|+++|+.++
T Consensus 100 -------------------------------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 100 -------------------------------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 6999999999999999999999999999999999999999999
Q ss_pred EecCC
Q 036723 238 WVGTS 242 (290)
Q Consensus 238 ~v~~~ 242 (290)
|+..+
T Consensus 143 ~i~~~ 147 (147)
T TIGR01656 143 LLVDG 147 (147)
T ss_pred EecCC
Confidence 99764
No 57
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.73 E-value=1.7e-16 Score=136.45 Aligned_cols=177 Identities=14% Similarity=0.181 Sum_probs=119.9
Q ss_pred ccEEEEecCCCcccCC---CChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcc--------cHHHHHHcCCC-CC
Q 036723 15 YDCLLFDLDDTIYPLT---SGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGT--------TLAGLRAIGYQ-FD 82 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~---~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~--------~~~~~~~~~~~-~~ 82 (290)
+++|++|+.||+.+.+ ..+++...+.+.+++.....-+ .... +.+..+. .+..+...... ..
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~k~~~ 74 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST--IVEN----LRELGKTPEELILLRKLHAEMDKDRKATP 74 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH--HHHH----HHHhccCCcHHHHHHHHHHHHHcCCCcch
Confidence 5799999999999743 4556666667777555433222 1111 1111111 00001011111 11
Q ss_pred HHH-----HHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc---CCCCcceeEEeecccCC
Q 036723 83 CDD-----FHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL---GLEDCFERIISFETLNS 151 (290)
Q Consensus 83 ~~~-----~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~ 151 (290)
... +.+.+... .....++||+.++|+.|+ ++++|+||++.......++++ ++..+|+.++.. ..+
T Consensus 75 lk~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g- 150 (220)
T TIGR01691 75 LKTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG- 150 (220)
T ss_pred HHHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc-
Confidence 111 12222221 245678999999999995 789999999999888888776 566778877642 222
Q ss_pred CCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHh
Q 036723 152 TDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~ 231 (290)
.||+|+.|..+++++|++|++|++|||+..|+++|++
T Consensus 151 -------------------------------------------~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~ 187 (220)
T TIGR01691 151 -------------------------------------------LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARK 187 (220)
T ss_pred -------------------------------------------cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHH
Confidence 5999999999999999999999999999999999999
Q ss_pred cCCeEEEecCCCC
Q 036723 232 LGLHTVWVGTSHR 244 (290)
Q Consensus 232 aGi~~i~v~~~~~ 244 (290)
+|+.++++.++..
T Consensus 188 AG~~ti~v~r~g~ 200 (220)
T TIGR01691 188 AGLHTGQLVRPGN 200 (220)
T ss_pred cCCEEEEEECCCC
Confidence 9999999987653
No 58
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.71 E-value=1.6e-17 Score=146.55 Aligned_cols=69 Identities=16% Similarity=0.300 Sum_probs=62.2
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHHHHHh
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el~~~l 262 (290)
++||+|.+|+.++++++++|+++++|||+. +|+.+|+++|+.++++.+|.. ...|+++++++.||.+++
T Consensus 177 ~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 177 VGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 479999999999999999999999999997 899999999999999988741 346899999999998754
No 59
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.70 E-value=1.4e-16 Score=126.38 Aligned_cols=94 Identities=27% Similarity=0.429 Sum_probs=79.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCc--------hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNAD--------KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESER 168 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (290)
.++|++.++|+.|+ ++++++||+. ...+...++++++. |+..+.+. ..
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence 45688888888875 7899999998 77888899999986 34443332 22
Q ss_pred CCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHc-CCCCCcEEEEcC-CccchHHHHhcCCeEEEec
Q 036723 169 PTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIA-NINPRKTIFFDD-SIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~-~~~~~e~i~iGD-s~~Di~~a~~aGi~~i~v~ 240 (290)
.||+++.|+.+++++ +++|+++++||| +.+|+.+|+++|+.+|++.
T Consensus 84 --------------------------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 --------------------------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred --------------------------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 699999999999999 599999999999 6899999999999999985
No 60
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.69 E-value=5.5e-16 Score=134.40 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=80.5
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCC----chHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNA----DKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERP 169 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~----~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (290)
....+.+++.++|+.++ ++++++||. ....+..+++.+|+..+|+.+++.+....
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~------------------ 172 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ------------------ 172 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC------------------
Confidence 44577788999999985 789999998 66678888889999999998888775543
Q ss_pred CccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 170 TELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
.||++. .+++++++ ++||||+.+|+.+|+++|+.++.+.++..
T Consensus 173 -------------------------~Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 173 -------------------------YQYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred -------------------------CCCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 477664 35677776 79999999999999999999999987764
No 61
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.68 E-value=9.8e-17 Score=132.71 Aligned_cols=104 Identities=18% Similarity=0.256 Sum_probs=91.7
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCC-chHHHHHHHHhcCCC---------CcceeEEeecccCCCCCCcccccccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNA-DKTHAARVLSRLGLE---------DCFERIISFETLNSTDKGTVLVDQDA 163 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~-~~~~~~~~l~~~gl~---------~~f~~i~~~~~~~~~~~~~~~~~~~~ 163 (290)
..+.++||+.++|+.|+ ++++++||. ....+...++.+++. .+|+.+++++....
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------ 109 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------ 109 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence 45678999999999996 789999998 888889999999998 99999999876432
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHc--CCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 164 SESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIA--NINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~--~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
.||.+.+++.+.+.+ |++|++|+||||+..|+++|+++|+.++++.+
T Consensus 110 -------------------------------~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 110 -------------------------------AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred -------------------------------HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 578888888888887 89999999999999999999999999999988
Q ss_pred CC
Q 036723 242 SH 243 (290)
Q Consensus 242 ~~ 243 (290)
+.
T Consensus 159 g~ 160 (174)
T TIGR01685 159 GM 160 (174)
T ss_pred Cc
Confidence 76
No 62
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.68 E-value=7e-17 Score=141.69 Aligned_cols=232 Identities=18% Similarity=0.177 Sum_probs=145.4
Q ss_pred ccCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHH-cCCCCCHHH---
Q 036723 10 VSNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRA-IGYQFDCDD--- 85 (290)
Q Consensus 10 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~--- 85 (290)
..+..+++++||+||||+++...+..+.. .++. ++..|++....+.... +........+.. .+.+..++.
T Consensus 3 ~~~~~y~~~l~DlDGvl~~G~~~ipga~e-~l~~--L~~~g~~~iflTNn~~---~s~~~~~~~L~~~~~~~~~~~~i~T 76 (269)
T COG0647 3 DVMDKYDGFLFDLDGVLYRGNEAIPGAAE-ALKR--LKAAGKPVIFLTNNST---RSREVVAARLSSLGGVDVTPDDIVT 76 (269)
T ss_pred chhhhcCEEEEcCcCceEeCCccCchHHH-HHHH--HHHcCCeEEEEeCCCC---CCHHHHHHHHHhhcCCCCCHHHeec
Confidence 45677999999999999997777766543 4443 4455655443220000 000001111122 122222222
Q ss_pred ----HHHHHhhcCCCCCC--CCChhHHHHHHcCCCcE----------EEEeCCchHHH----HHHHHhcCCCCcceeEEe
Q 036723 86 ----FHSYVHGRLPYMML--KPDPVLRNLLLSLPIRK----------VIFTNADKTHA----ARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 86 ----~~~~~~~~~~~~~~--~~~pg~~~~L~~L~~~~----------~ivT~~~~~~~----~~~l~~~gl~~~f~~i~~ 145 (290)
..+++.+......+ .=.+++.+.|+.++..+ +++-+-++... ...+.... .-...|.+
T Consensus 77 S~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~--~g~~fI~t 154 (269)
T COG0647 77 SGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIA--AGAPFIAT 154 (269)
T ss_pred HHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHH--cCCcEEEe
Confidence 23344443321222 12567778887775211 12222222111 11111111 11223333
Q ss_pred ecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-c
Q 036723 146 FETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-R 224 (290)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~ 224 (290)
.. +..++...+..+.+|++.......+-+.+.++|||.+.+|+.++++++.+++++++|||++ +
T Consensus 155 Np---------------D~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~T 219 (269)
T COG0647 155 NP---------------DLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDT 219 (269)
T ss_pred CC---------------CccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchh
Confidence 22 3446777779999999988888887788789999999999999999999999999999999 8
Q ss_pred chHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHHHHHhHH
Q 036723 225 NLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNIKEALPE 264 (290)
Q Consensus 225 Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el~~~l~~ 264 (290)
||.+|+++||.+++|.+|-. ...|+++.+|+.++...+..
T Consensus 220 DI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~ 267 (269)
T COG0647 220 DILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKE 267 (269)
T ss_pred hHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhc
Confidence 99999999999999988854 45689999999999886654
No 63
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.66 E-value=2.7e-16 Score=129.01 Aligned_cols=101 Identities=18% Similarity=0.284 Sum_probs=85.7
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCc---------------hHHHHHHHHhcCCCCcceeEE-e----ecccCCCCCC
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNAD---------------KTHAARVLSRLGLEDCFERII-S----FETLNSTDKG 155 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~---------------~~~~~~~l~~~gl~~~f~~i~-~----~~~~~~~~~~ 155 (290)
+.++||+.++|+.|+ ++++++||.. ...+...++.+|+. |+.++ + +++.+.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~---- 101 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC---- 101 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC----
Confidence 477899999999995 7899999963 45677788999996 77654 4 244332
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
.||++.+++.+++++++++++++||||+.+|+++|+++|+.
T Consensus 102 ---------------------------------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 102 ---------------------------------------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred ---------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 79999999999999999999999999999999999999999
Q ss_pred EEEecCCCC
Q 036723 236 TVWVGTSHR 244 (290)
Q Consensus 236 ~i~v~~~~~ 244 (290)
++++.+++.
T Consensus 143 ~i~~~~~~~ 151 (161)
T TIGR01261 143 GIQYDEEEL 151 (161)
T ss_pred EEEEChhhc
Confidence 999988764
No 64
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.64 E-value=1.3e-15 Score=133.86 Aligned_cols=88 Identities=14% Similarity=0.114 Sum_probs=69.9
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC-----
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----- 244 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----- 244 (290)
++...++.+.+.........+...+||+|++|+.++++++++++++++|||++ +||.+|+++|+.++++.++..
T Consensus 153 ~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~ 232 (249)
T TIGR01457 153 GLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEV 232 (249)
T ss_pred CCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHH
Confidence 44445555544444444445556789999999999999999999999999998 899999999999999988753
Q ss_pred -C--CCcceeecCHhHH
Q 036723 245 -A--EGVDYALESIHNI 258 (290)
Q Consensus 245 -~--~~ad~v~~sl~el 258 (290)
. ..|+++++++.++
T Consensus 233 ~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 233 AGLPIAPTHVVSSLAEW 249 (249)
T ss_pred hcCCCCCCEEeCChhhC
Confidence 1 4688999888764
No 65
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.63 E-value=4.3e-15 Score=126.47 Aligned_cols=193 Identities=13% Similarity=0.100 Sum_probs=115.8
Q ss_pred cEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccHHHHHHcCCCCCHHHHHHHHhhcCC
Q 036723 16 DCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTLAGLRAIGYQFDCDDFHSYVHGRLP 95 (290)
Q Consensus 16 k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (290)
.+++|||||||++. .| . .+....|.............+..+....-.+... ...+.+.+.+.+
T Consensus 2 ~la~FDlD~TLi~~---~w---~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~----- 64 (203)
T TIGR02137 2 EIACLDLEGVLVPE---IW---I-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVI----- 64 (203)
T ss_pred eEEEEeCCcccHHH---HH---H-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHH-----
Confidence 36999999999973 22 2 3455666433221110011111111111111110 134455554444
Q ss_pred CCCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 96 YMMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 96 ~~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..++++||+.++++.++ .+++|+|++....+..+++++|+..+|......++.+.-.+
T Consensus 65 -~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG------------------- 124 (203)
T TIGR02137 65 -ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVG------------------- 124 (203)
T ss_pred -HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeEC-------------------
Confidence 33578999999999886 68999999999999999999999887765333221010000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-CCCcc-ee
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-AEGVD-YA 251 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-~~~ad-~v 251 (290)
. ....++.+..+...+++.+. ++++||||.||+.|++.+|++.++...+.- ...++ -+
T Consensus 125 -----------~------~~~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~ 184 (203)
T TIGR02137 125 -----------Y------QLRQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA 184 (203)
T ss_pred -----------e------eecCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCc
Confidence 0 00123333333333456553 799999999999999999998777766543 22233 34
Q ss_pred ecCHhHHHHHhHHH
Q 036723 252 LESIHNIKEALPEL 265 (290)
Q Consensus 252 ~~sl~el~~~l~~~ 265 (290)
+.+.+||++.+.+.
T Consensus 185 ~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 185 VHTYEDLKREFLKA 198 (203)
T ss_pred ccCHHHHHHHHHHH
Confidence 67888888877654
No 66
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.62 E-value=1.9e-15 Score=124.61 Aligned_cols=94 Identities=21% Similarity=0.287 Sum_probs=77.4
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchH------------HHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKT------------HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~------------~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
++||+.++|+.|+ ++++|+||++.. .+..+++++|+. ++.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 5689999998885 789999998763 467788999985 355555543221
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEEEEcCCc--------cchHHHHhcCCe
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN--INPRKTIFFDDSI--------RNLETGKRLGLH 235 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~--~~~~e~i~iGDs~--------~Di~~a~~aGi~ 235 (290)
+||+|+.++.+++++| +++++++||||+. +|+++|+++|+.
T Consensus 107 -----------------------------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 107 -----------------------------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred -----------------------------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 6999999999999999 9999999999996 699999999999
Q ss_pred EEEe
Q 036723 236 TVWV 239 (290)
Q Consensus 236 ~i~v 239 (290)
+++-
T Consensus 158 ~~~~ 161 (166)
T TIGR01664 158 FKYP 161 (166)
T ss_pred cCCh
Confidence 8764
No 67
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.62 E-value=1e-14 Score=121.90 Aligned_cols=111 Identities=13% Similarity=0.105 Sum_probs=80.2
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+++.||+.++|+.|+ ++++++||+....+...++++++..+|+.+++.+...... +.+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~-----------------g~~~~ 133 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDND-----------------GRHIV 133 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCC-----------------CcEEE
Confidence 578899999999885 7899999999999999999999999999998866432110 00000
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
...-|.-+ . +...+.+|+..++.+++++ ++++++|||+.+|+++|+++++.
T Consensus 134 ~~~~~~~~-----~-~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 134 WPHHCHGC-----C-SCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred ecCCCCcc-----C-cCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 00000000 0 0112556688999888765 78999999999999999999764
No 68
>PRK10444 UMP phosphatase; Provisional
Probab=99.62 E-value=2.3e-15 Score=132.00 Aligned_cols=87 Identities=14% Similarity=0.162 Sum_probs=71.3
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC------
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR------ 244 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~------ 244 (290)
+...+|.+.+....-...++.+++||+|++++.+++++++++++|++|||++ +|+.+|+++|+.++++.+|..
T Consensus 150 ~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~ 229 (248)
T PRK10444 150 FYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDID 229 (248)
T ss_pred CcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHh
Confidence 4455555444444444455566799999999999999999999999999998 899999999999999988753
Q ss_pred --CCCcceeecCHhHH
Q 036723 245 --AEGVDYALESIHNI 258 (290)
Q Consensus 245 --~~~ad~v~~sl~el 258 (290)
..+|+++++|+.+|
T Consensus 230 ~~~~~pd~~~~sl~el 245 (248)
T PRK10444 230 SMPFRPSWIYPSVADI 245 (248)
T ss_pred cCCCCCCEEECCHHHh
Confidence 25799999999887
No 69
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.62 E-value=2e-15 Score=118.53 Aligned_cols=116 Identities=23% Similarity=0.315 Sum_probs=90.9
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
....++|++.++|+.|+ +.++++|++....+...++++++..+|+.+++.+....... .....
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------~~~~~ 86 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYP--------------KEGLF 86 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcc--------------ccccc
Confidence 55688899999999886 67999999999999999999999888888887664432100 00000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
........+||++..++.++++++.+++++++|||+.+|+++++.+|+.++++
T Consensus 87 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 87 -------------LGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred -------------ccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 01111223699999999999999999999999999999999999999998874
No 70
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.60 E-value=9.6e-16 Score=136.88 Aligned_cols=65 Identities=29% Similarity=0.432 Sum_probs=58.1
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------------CCCcceeecCHhHH
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------------AEGVDYALESIHNI 258 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------------~~~ad~v~~sl~el 258 (290)
.+||+|..++.+++++|+++++|+||||++ +||.+|+++|+.++++.+|.. ..+|+++++++.||
T Consensus 200 ~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 200 VGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred cCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 489999999999999999999999999996 999999999999999988753 13689999998764
No 71
>PLN02645 phosphoglycolate phosphatase
Probab=99.60 E-value=7.4e-16 Score=139.62 Aligned_cols=72 Identities=17% Similarity=0.149 Sum_probs=63.8
Q ss_pred CCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC----------CCCcceeecCHhHHH
Q 036723 191 TPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR----------AEGVDYALESIHNIK 259 (290)
Q Consensus 191 ~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~----------~~~ad~v~~sl~el~ 259 (290)
+.+++||+|.+|+.+++++++++++++||||++ +||.+|+++|++++++.+|.. ...|+++++++.+|.
T Consensus 225 ~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~ 304 (311)
T PLN02645 225 PLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFL 304 (311)
T ss_pred cccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHH
Confidence 344689999999999999999999999999998 999999999999999987742 146899999999998
Q ss_pred HHh
Q 036723 260 EAL 262 (290)
Q Consensus 260 ~~l 262 (290)
+++
T Consensus 305 ~~~ 307 (311)
T PLN02645 305 TLK 307 (311)
T ss_pred HHh
Confidence 754
No 72
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.60 E-value=9.6e-15 Score=124.99 Aligned_cols=190 Identities=14% Similarity=0.125 Sum_probs=121.6
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHH---HHcccHHHHHHcCCCCCHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYK---FYGTTLAGLRAIGYQFDCDDFHSY 89 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~ 89 (290)
++.++++|||||||++ ...+. .+....|....... ....... .+..............+.+...+.
T Consensus 3 ~~~~L~vFD~D~TLi~-----~~~~~-----~~~~~~g~~~~v~~-~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~ 71 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-----AELID-----ELARGAGVGEEVLA-ITERAMRGELDFEESLRLRVALLKGLPVEVLEEV 71 (212)
T ss_pred CccceEEEecccchhh-----HHHHH-----HHHHHhCCHHHHHH-HHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4578999999999999 22221 34555555433221 1111111 111111111122223334434433
Q ss_pred HhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccC
Q 036723 90 VHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 90 ~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
..+. +++.||+.++++.++ .+++|+|++....++++.+++|++..+.+.+..++ +.-++
T Consensus 72 ~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~ltG------------ 133 (212)
T COG0560 72 REEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLTG------------ 133 (212)
T ss_pred HHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEec------------
Confidence 3222 688899999998886 88999999999999999999999988887776664 21000
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCC
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAE 246 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~ 246 (290)
.+..+.+.++-|...++.+++++|+++++++++|||.||+.|.+.+|.+.+....+....
T Consensus 134 --------------------~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~ 193 (212)
T COG0560 134 --------------------RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRA 193 (212)
T ss_pred --------------------eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHH
Confidence 011111124677899999999999999999999999999999999999765554444333
Q ss_pred Cccee
Q 036723 247 GVDYA 251 (290)
Q Consensus 247 ~ad~v 251 (290)
.++..
T Consensus 194 ~a~~~ 198 (212)
T COG0560 194 LADVR 198 (212)
T ss_pred HHHHh
Confidence 33333
No 73
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.58 E-value=7.8e-15 Score=125.99 Aligned_cols=125 Identities=13% Similarity=0.100 Sum_probs=86.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc---eeEEeecccCCCCCCccccccccccCCCCCc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF---ERIISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
.+.+.||+.++++.|+ ++++|+|++....++.+++.++....+ +.++..+.+..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~-------------------- 127 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI-------------------- 127 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------------
Confidence 3688899999999885 789999999999999999887543322 11222211110
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHH----------HHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAF----------EQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~----------~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
.||+|..+ ..++++++..+++++||||+.+|+++|+.||+ +++..
T Consensus 128 -----------------------~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~ 182 (214)
T TIGR03333 128 -----------------------DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARD 182 (214)
T ss_pred -----------------------eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehH
Confidence 23332222 24556666688899999999999999999998 33322
Q ss_pred C-----CCCCCcceeecCHhHHHHHhHHHHH
Q 036723 242 S-----HRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 242 ~-----~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
. .....+...++++.|+.+.|.+.|+
T Consensus 183 ~l~~~~~~~~~~~~~~~~f~di~~~l~~~~~ 213 (214)
T TIGR03333 183 YLLNECEELGLNHAPFQDFYDVRKELENVKE 213 (214)
T ss_pred HHHHHHHHcCCCccCcCCHHHHHHHHHHHhc
Confidence 1 1233467778999999999988775
No 74
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.57 E-value=1.2e-14 Score=118.57 Aligned_cols=112 Identities=17% Similarity=0.216 Sum_probs=91.0
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNA 184 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
+.+.|+.-+++++|+||.+...+...++++|+..+|+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~------------------------------------------ 73 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG------------------------------------------ 73 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec------------------------------------------
Confidence 34444555588999999999999999999998766541
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH---HH
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN---IK 259 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e---l~ 259 (290)
.+|+++.++.+++++|+++++|++|||+.+|+.+++.+|+. +++.++.. ...+++++.+... +.
T Consensus 74 ----------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~ 142 (154)
T TIGR01670 74 ----------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVR 142 (154)
T ss_pred ----------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHH
Confidence 37788999999999999999999999999999999999996 66665543 5568999887654 77
Q ss_pred HHhHHHHHhh
Q 036723 260 EALPELWEVA 269 (290)
Q Consensus 260 ~~l~~~~~~~ 269 (290)
+++.++++.-
T Consensus 143 ~~~~~~~~~~ 152 (154)
T TIGR01670 143 EVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHhh
Confidence 7777777654
No 75
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.54 E-value=1.5e-13 Score=113.86 Aligned_cols=93 Identities=22% Similarity=0.284 Sum_probs=76.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCc-hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNAD-KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.++|++.++|+.|+ ++++++||+. ...+...++.+++..++ +.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~------------------------ 89 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA------------------------ 89 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC------------------------
Confidence 44577777777775 7899999998 56666666777654211 11
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~ 244 (290)
.||+|++|..++++++++++++++|||+. .|+.+|+++|+.++++.++..
T Consensus 90 -------------------~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 90 -------------------VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred -------------------CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 69999999999999999999999999999 799999999999999988764
No 76
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.54 E-value=1.3e-14 Score=119.73 Aligned_cols=111 Identities=18% Similarity=0.214 Sum_probs=86.4
Q ss_pred HHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCC
Q 036723 107 NLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADL 186 (290)
Q Consensus 107 ~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (290)
..|+..+++++|+||.....+...++.+++..+|+.
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~-------------------------------------------- 79 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG-------------------------------------------- 79 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------------------------------------------
Confidence 445555689999999999999999999999877752
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-CCCcceeecCHh---HHHHHh
Q 036723 187 ELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-AEGVDYALESIH---NIKEAL 262 (290)
Q Consensus 187 ~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-~~~ad~v~~sl~---el~~~l 262 (290)
.||+|+.++.+++++++++++|++|||+.||+.|++.+|+..+..+.... +..+++++.+-. -+.+++
T Consensus 80 --------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~ 151 (169)
T TIGR02726 80 --------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVREVA 151 (169)
T ss_pred --------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHH
Confidence 37888999999999999999999999999999999999997665544332 556788765422 234444
Q ss_pred HHHHHhh
Q 036723 263 PELWEVA 269 (290)
Q Consensus 263 ~~~~~~~ 269 (290)
..++...
T Consensus 152 e~il~~~ 158 (169)
T TIGR02726 152 ELILKAQ 158 (169)
T ss_pred HHHHHhc
Confidence 5555544
No 77
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.54 E-value=1.2e-13 Score=126.29 Aligned_cols=111 Identities=17% Similarity=0.297 Sum_probs=87.2
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCC---------------chHHHHHHHHhcCCCCcceeEEee-----cccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNA---------------DKTHAARVLSRLGLEDCFERIISF-----ETLNSTDK 154 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~---------------~~~~~~~~l~~~gl~~~f~~i~~~-----~~~~~~~~ 154 (290)
...++||+.++|+.|+ ++++|+||. .......+++.+++. |+.++.+ ++..
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~---- 101 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCS---- 101 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCC----
Confidence 3678899999999986 789999995 244556677888884 6665433 2222
Q ss_pred CccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 155 GTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
.+||+|.++..+++++++++++++||||+.+|+++|+++|+
T Consensus 102 ---------------------------------------~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi 142 (354)
T PRK05446 102 ---------------------------------------CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGI 142 (354)
T ss_pred ---------------------------------------CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCC
Confidence 27999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCCCcceeecCHhHHHHHh
Q 036723 235 HTVWVGTSHRAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 235 ~~i~v~~~~~~~~ad~v~~sl~el~~~l 262 (290)
++|+++... + +++++.+.|
T Consensus 143 ~~I~v~~~~------~---~~~~i~~~l 161 (354)
T PRK05446 143 KGIRYARET------L---NWDAIAEQL 161 (354)
T ss_pred eEEEEECCC------C---CHHHHHHHH
Confidence 999995532 1 456666654
No 78
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.53 E-value=1.6e-13 Score=116.46 Aligned_cols=108 Identities=15% Similarity=0.079 Sum_probs=81.3
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee-EEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER-IISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++|++.++++.++ .+++|+|++....++.+++++|+...|.. +...++-...++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~-------------------- 145 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGN-------------------- 145 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCC--------------------
Confidence 467899999998875 68999999999999999999999877655 222121000000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
+ ..+...+++|...++.++++.++++++++++|||.+|+++++.+|.+++..
T Consensus 146 -------~------~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 146 -------I------DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -------c------cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 0 000012678889999999999999999999999999999999999865443
No 79
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.51 E-value=1.6e-13 Score=118.99 Aligned_cols=109 Identities=15% Similarity=0.155 Sum_probs=82.5
Q ss_pred HHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCc----hHHHHHHHHhcCC--CCcceeEEeecccCCCC
Q 036723 83 CDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNAD----KTHAARVLSRLGL--EDCFERIISFETLNSTD 153 (290)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~----~~~~~~~l~~~gl--~~~f~~i~~~~~~~~~~ 153 (290)
...|++.+.+.. .....|+||+.++|+.|+ .+++++||.. ......+++.+|+ ..+|+.+++.+..
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---- 172 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---- 172 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC----
Confidence 444555555542 345789999999999995 7899999953 4456666777999 7888887776532
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
.||++.. +++++++ +++|||+.+|+.+|++||
T Consensus 173 -----------------------------------------~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AG 204 (237)
T PRK11009 173 -----------------------------------------GQYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAG 204 (237)
T ss_pred -----------------------------------------CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcC
Confidence 3665543 5566776 999999999999999999
Q ss_pred CeEEEecCCCC
Q 036723 234 LHTVWVGTSHR 244 (290)
Q Consensus 234 i~~i~v~~~~~ 244 (290)
+.+|.+.++..
T Consensus 205 i~~I~v~~G~~ 215 (237)
T PRK11009 205 ARGIRILRAAN 215 (237)
T ss_pred CcEEEEecCCC
Confidence 99999988764
No 80
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.50 E-value=1.2e-13 Score=122.56 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=55.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~ 265 (290)
+..|+.+++.+++++|++++++++|||+.||++|++.+|+..+ ++++.. +..|++++.+.++ +.++|.++
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~va-mgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVA-MGNADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEE-ecCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 4567899999999999999999999999999999999998544 444433 5568999877554 66666554
No 81
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.49 E-value=2.3e-12 Score=111.19 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=107.4
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcC--C---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSL--P---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L--~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
...+++.+.+ ..+++.||+.++++.+ + ..+.|+|++...+++.+|++.|+...|+.|++....
T Consensus 58 vt~~~I~~~l------~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~------ 125 (234)
T PF06888_consen 58 VTPEDIRDAL------RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPAC------ 125 (234)
T ss_pred CCHHHHHHHH------HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCce------
Confidence 4566666555 5678899999999988 2 669999999999999999999999999999885422
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH---cCCCCCcEEEEcCCccchHHHHhc
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKI---ANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~---~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
+...+...+.+...+-|..++.++++ ...++.+++. -|..-++++||||+.||+.++...
T Consensus 126 --------~~~~G~l~v~pyh~h~C~~C~~NmCK---------~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L 188 (234)
T PF06888_consen 126 --------FDADGRLRVRPYHSHGCSLCPPNMCK---------GKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRL 188 (234)
T ss_pred --------ecCCceEEEeCccCCCCCcCCCccch---------HHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccccc
Confidence 11122222223333444444433433 3677777776 377789999999999999999997
Q ss_pred CCe-EEEecCCCC----------CCCcc-eeecCHhHHHHHhHHH
Q 036723 233 GLH-TVWVGTSHR----------AEGVD-YALESIHNIKEALPEL 265 (290)
Q Consensus 233 Gi~-~i~v~~~~~----------~~~ad-~v~~sl~el~~~l~~~ 265 (290)
+-. .++...++. ...|. ..+.+=.||.+.|.++
T Consensus 189 ~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 189 RPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQL 233 (234)
T ss_pred CCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhh
Confidence 765 555555542 11233 2366777777776654
No 82
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.47 E-value=1.5e-13 Score=115.21 Aligned_cols=100 Identities=18% Similarity=0.336 Sum_probs=81.2
Q ss_pred HcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCC
Q 036723 110 LSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELP 189 (290)
Q Consensus 110 ~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (290)
+.-+++++++||.....+...++.+|+..+|+ +
T Consensus 61 ~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g--------------------------------------- 93 (183)
T PRK09484 61 LTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G--------------------------------------- 93 (183)
T ss_pred HHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C---------------------------------------
Confidence 33447889999999999999999999876653 1
Q ss_pred CCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec------CHhHHHHH
Q 036723 190 RTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE------SIHNIKEA 261 (290)
Q Consensus 190 ~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~------sl~el~~~ 261 (290)
.++++..++.+++++|+++++++||||+.+|+.+++++|+.++ ++++.. ...+++++. .+.|+.+.
T Consensus 94 -----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 94 -----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRIAGGRGAVREVCDL 167 (183)
T ss_pred -----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecCCCCCCHHHHHHHH
Confidence 3667899999999999999999999999999999999999844 554432 456889886 57777765
Q ss_pred h
Q 036723 262 L 262 (290)
Q Consensus 262 l 262 (290)
|
T Consensus 168 i 168 (183)
T PRK09484 168 L 168 (183)
T ss_pred H
Confidence 4
No 83
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.47 E-value=1.3e-13 Score=119.38 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=55.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPEL 265 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~ 265 (290)
+..|+.+++.+++++|++++++++|||+.||++|++.+|+.++ ++++.. +..+++++.+.++ +.+.|.++
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va-m~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~ 228 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVA-VANADEELKEAADYVTEKSYGEGVAEAIEHL 228 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEE-ecCccHHHHHhcceEecCCCcChHHHHHHHH
Confidence 6778999999999999999999999999999999999999654 444443 5568888876443 55555544
No 84
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.47 E-value=1.7e-13 Score=113.53 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=77.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.+.+.||+.++++.++ .+++|+|++....++.+++.+|+...|...+..++-+...+ +.
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g------------~~------ 132 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTG------------PI------ 132 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeC------------cc------
Confidence 3567899999999885 78999999999999999999999877776655432111000 00
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
..++...+..|+..++.++++++++++++++||||.+|+.+++.+
T Consensus 133 -------------~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 133 -------------EGQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -------------CCcccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000011256678899999999999999999999999999999864
No 85
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.46 E-value=2.3e-14 Score=116.07 Aligned_cols=93 Identities=17% Similarity=0.104 Sum_probs=82.7
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCC-cceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
.+.++||+.++|+.|+ ++++|+|++....++.+++++++.. +|+.+++.++...
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~----------------------- 99 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF----------------------- 99 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc-----------------------
Confidence 4577899999999997 7799999999999999999999865 5688999887764
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeE
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+||+ |..+++++|++|++|++|||+.+|+.+++++|+..
T Consensus 100 --------------------~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 100 --------------------VKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred --------------------cCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 6886 88899999999999999999999999999999864
No 86
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.45 E-value=2.2e-13 Score=107.63 Aligned_cols=85 Identities=19% Similarity=0.195 Sum_probs=73.2
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCC-chHHHHHHHHhcC-------CCCcceeEEeecccCCCCCCccccccccccCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNA-DKTHAARVLSRLG-------LEDCFERIISFETLNSTDKGTVLVDQDASESER 168 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~-~~~~~~~~l~~~g-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (290)
.++||+.++|+.|+ ++++++||+ ........++.++ +..+|+.+++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~--------------------- 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY--------------------- 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC---------------------
Confidence 56789999999885 789999999 8888888889888 778888877764
Q ss_pred CCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC--CCCCcEEEEcCCccchHHHHh
Q 036723 169 PTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN--INPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~--~~~~e~i~iGDs~~Di~~a~~ 231 (290)
.+|+|..|..+++++| ++|++|++|||+..|++..+.
T Consensus 88 --------------------------~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 88 --------------------------WLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred --------------------------CCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 4788999999999999 999999999999999877654
No 87
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.45 E-value=1.1e-12 Score=119.35 Aligned_cols=71 Identities=8% Similarity=0.101 Sum_probs=59.8
Q ss_pred CCCCCCcHHHHHHHHHHc--------CC-----CCCcEEEEcCCc-cchHHHHhcCCeEEEecCCC-C------CCCcce
Q 036723 192 PVVCKPFEEAFEQVFKIA--------NI-----NPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSH-R------AEGVDY 250 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~--------~~-----~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~-~------~~~ad~ 250 (290)
.++|||++.+|+.+++.+ +. ++++++||||++ +||.+|+++||.+++|.+|. . ...|++
T Consensus 229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~ 308 (321)
T TIGR01456 229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTL 308 (321)
T ss_pred EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCE
Confidence 357999999999988877 43 457999999999 99999999999999998862 1 235899
Q ss_pred eecCHhHHHHHh
Q 036723 251 ALESIHNIKEAL 262 (290)
Q Consensus 251 v~~sl~el~~~l 262 (290)
+++|+.|+...|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999999988754
No 88
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.44 E-value=6.4e-13 Score=106.54 Aligned_cols=89 Identities=30% Similarity=0.519 Sum_probs=74.9
Q ss_pred hhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccC
Q 036723 103 PVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYC 179 (290)
Q Consensus 103 pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
|.+.+.++.++ .++.|+||+....+....+.+|+. .|...
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A--------------------------------- 91 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYRA--------------------------------- 91 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeecc---------------------------------
Confidence 44444444443 788999999999999999999864 44332
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCC
Q 036723 180 SRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 180 ~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~ 243 (290)
.||.+..|+.+++++++++++|++|||.+ +|+.+++.+|+.+|.|..=.
T Consensus 92 ---------------~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~ 141 (175)
T COG2179 92 ---------------KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLV 141 (175)
T ss_pred ---------------cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEec
Confidence 69999999999999999999999999999 89999999999999996643
No 89
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.44 E-value=3.6e-13 Score=96.26 Aligned_cols=65 Identities=25% Similarity=0.415 Sum_probs=59.8
Q ss_pred CCCCcHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHH
Q 036723 194 VCKPFEEAFEQVFKIANINPRKTIFFDDS-IRNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNI 258 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~~~e~i~iGDs-~~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el 258 (290)
.+||+|.+++.++++++++++++++|||+ .+||.+|+++|+.++++.++.. ..+|+++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 48999999999999999999999999999 6999999999999999988763 35899999999885
No 90
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.43 E-value=3.5e-13 Score=114.75 Aligned_cols=87 Identities=21% Similarity=0.334 Sum_probs=74.3
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
.++.|++.++|+.|+ ++++++|+.....+..+.+.+|+. +.++.+...
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~-------------------------- 176 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI-------------------------- 176 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE--------------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc--------------------------
Confidence 467899999999986 679999999999999999999984 333333210
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG 233 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG 233 (290)
+||.+.++..+++.+++++++|+||||+.||+.|+++||
T Consensus 177 -------------------~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 -------------------GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------------------TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------------------ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 299999999999999999999999999999999999987
No 91
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.41 E-value=5.5e-13 Score=120.14 Aligned_cols=108 Identities=17% Similarity=0.164 Sum_probs=89.4
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC-cceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++|++.++|+.|+ ++++++||.+.......++.+++.. +|+.+++.+....
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~----------------------- 242 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH----------------------- 242 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh-----------------------
Confidence 467899999999885 7899999999999999999999986 8998887762110
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCC-CCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANI-NPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~-~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.++. ..-+||+|..+..++++++. ++++|++|||+.+|+++|+++|+.++++.+|
T Consensus 243 ------------~~~~-~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 243 ------------FQRE-QGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred ------------hccc-CCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 0000 00169999999999999998 6799999999999999999999999999776
No 92
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.40 E-value=8.9e-13 Score=115.22 Aligned_cols=96 Identities=21% Similarity=0.202 Sum_probs=81.8
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC-
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR- 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~- 244 (290)
+.+...++-.|++.+......-+.|-++|||.+.+++.++++++++|++|+||||++ +||.-++++|++++++.+|-.
T Consensus 195 ~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~ 274 (306)
T KOG2882|consen 195 PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTT 274 (306)
T ss_pred CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCc
Confidence 355566666677777777778888999999999999999999999999999999999 799999999999999987642
Q ss_pred -----------CCCcceeecCHhHHHHHh
Q 036723 245 -----------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 245 -----------~~~ad~v~~sl~el~~~l 262 (290)
...|||.++++.++.+.+
T Consensus 275 led~~~~~~~~~~~PDyy~~~l~d~~~~~ 303 (306)
T KOG2882|consen 275 LEDILEAQGDNKMVPDYYADSLGDLLPLL 303 (306)
T ss_pred HHHHHhcccccCCCCchHHhhHHHHhhhc
Confidence 345899999998887754
No 93
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.39 E-value=4.7e-13 Score=115.36 Aligned_cols=62 Identities=23% Similarity=0.196 Sum_probs=51.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN 257 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e 257 (290)
+.+|+.+++.+++++|++++++++|||+.||+.|++.+|+. +.++++.. +..+++++.+..+
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-VAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-EEcCChhHHHHHhcCeecCCCCC
Confidence 57888999999999999999999999999999999999996 44444433 5678888876443
No 94
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.31 E-value=3.3e-12 Score=111.71 Aligned_cols=48 Identities=25% Similarity=0.399 Sum_probs=43.7
Q ss_pred CCCCcHHHHHHHHHHcCCC-CCcEEEEcCCc-cchHHHHhcCCeEEEecC
Q 036723 194 VCKPFEEAFEQVFKIANIN-PRKTIFFDDSI-RNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~~~~-~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~ 241 (290)
.+||+|..|+.++++++.. +++++||||++ +|+.+|+++|+.++++.+
T Consensus 193 ~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 193 SGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred CCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 4899999999999999975 67899999996 999999999999999853
No 95
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.30 E-value=2.2e-12 Score=110.69 Aligned_cols=60 Identities=15% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC-CCCCcceeecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-RAEGVDYALES 254 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~~~~ad~v~~s 254 (290)
+..|..+++.+++++|++++++++|||+.||++|++.+|+.+++.+... -+..+++++.+
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSN 205 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCC
Confidence 5677889999999999999999999999999999999998655443322 25567888765
No 96
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.30 E-value=3.5e-12 Score=105.54 Aligned_cols=73 Identities=16% Similarity=0.319 Sum_probs=62.1
Q ss_pred CCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC--------CCCcceeecCHhHHHHHh
Q 036723 192 PVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR--------AEGVDYALESIHNIKEAL 262 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~--------~~~ad~v~~sl~el~~~l 262 (290)
+++|||++..|+.+++.+|++|++++||||.. .|+-.|..+||..+.|.+|.- ...|+.+.+++.|--++|
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I 256 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLI 256 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHH
Confidence 56799999999999999999999999999999 589999999999999977641 345777788877777665
Q ss_pred HH
Q 036723 263 PE 264 (290)
Q Consensus 263 ~~ 264 (290)
.+
T Consensus 257 ~q 258 (262)
T KOG3040|consen 257 IQ 258 (262)
T ss_pred Hh
Confidence 43
No 97
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.29 E-value=7.1e-11 Score=105.13 Aligned_cols=70 Identities=16% Similarity=0.068 Sum_probs=53.1
Q ss_pred CcHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHhcCCeEEEecCCCC-C----CCc-ceee--cC--HhHHHHHhHHH
Q 036723 197 PFEEAFEQVFKIANINP-RKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-A----EGV-DYAL--ES--IHNIKEALPEL 265 (290)
Q Consensus 197 p~~~~~~~il~~~~~~~-~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-~----~~a-d~v~--~s--l~el~~~l~~~ 265 (290)
.|..+++.+++++|+++ +++++|||+.||++|++.+|+.+++-+.... + ..+ +.++ ++ =+-+.+.|.++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence 67789999999999999 9999999999999999999987665554433 3 223 4665 34 34666666665
Q ss_pred H
Q 036723 266 W 266 (290)
Q Consensus 266 ~ 266 (290)
+
T Consensus 270 ~ 270 (273)
T PRK00192 270 L 270 (273)
T ss_pred H
Confidence 4
No 98
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.27 E-value=1e-11 Score=108.19 Aligned_cols=51 Identities=22% Similarity=0.417 Sum_probs=46.9
Q ss_pred CCCCCCcHHHHHHHHHHcCCCCCcE-EEEcCCc-cchHHHHhcCCeEEEecCC
Q 036723 192 PVVCKPFEEAFEQVFKIANINPRKT-IFFDDSI-RNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~~~~~~e~-i~iGDs~-~Di~~a~~aGi~~i~v~~~ 242 (290)
.+.+||++..|+.++++++++++++ ++|||+. +||.+|+++|+.++++.+|
T Consensus 184 ~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 184 TVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 3468999999999999999998887 9999999 8999999999999999764
No 99
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.27 E-value=1.3e-11 Score=101.16 Aligned_cols=194 Identities=16% Similarity=0.149 Sum_probs=115.2
Q ss_pred CCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccH---HHHHH-c-CCCCCHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL---AGLRA-I-GYQFDCDDFH 87 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~---~~~~~-~-~~~~~~~~~~ 87 (290)
.+.++|+||+|.|++. .+.+. .++...|+...... .. .+.++-.. +.+.. + -......
T Consensus 14 ~~~~aVcFDvDSTvi~-eEgId---------elA~~~G~~~~Va~-~T---~rAMng~~~F~eaL~~Rl~llqp~~~--- 76 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQ-EEGID---------ELAAYCGVGEAVAE-VT---RRAMNGEADFQEALAARLSLLQPLQV--- 76 (227)
T ss_pred HhcCeEEEecCcchhH-HhhHH---------HHHHHhCchHHHHH-HH---HHHhCCCCcHHHHHHHHHHHhcccHH---
Confidence 4578999999999998 45444 26666676554432 11 11112111 11110 0 0111111
Q ss_pred HHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC--cceeEEeecccCCCCCCccccccc
Q 036723 88 SYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED--CFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 88 ~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+.+..+.+.+-||++++.+.|+ .+++++|++.+..+..+...+|+.. .|.+..-.+..+.
T Consensus 77 -qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk----------- 144 (227)
T KOG1615|consen 77 -QVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK----------- 144 (227)
T ss_pred -HHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------
Confidence 2222233356788899999999997 7799999999999999999999975 5655544443322
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
-.=||..+..+. +--++..++.+.+ +.+-+.++||||+.+|+++... |..+++.+.-
T Consensus 145 -------~~gfd~~~ptsd-------------sggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~ 201 (227)
T KOG1615|consen 145 -------YLGFDTNEPTSD-------------SGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGN 201 (227)
T ss_pred -------ccccccCCcccc-------------CCccHHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCc
Confidence 111222221111 3345578887777 7777889999999999998877 3333333221
Q ss_pred C----CCCCcceeecCHhHH
Q 036723 243 H----RAEGVDYALESIHNI 258 (290)
Q Consensus 243 ~----~~~~ad~v~~sl~el 258 (290)
. -+..+++.+.++..|
T Consensus 202 ~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 202 VIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred eEcHhhHhccHHHHHHHHHH
Confidence 1 134455555555444
No 100
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.26 E-value=3.6e-11 Score=106.38 Aligned_cols=72 Identities=25% Similarity=0.257 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC-CCCCcceeecC--HhHHHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH-RAEGVDYALES--IHNIKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~-~~~~ad~v~~s--l~el~~~l~~~~ 266 (290)
+.-|..+++.+++++|++++++++|||+.||++|.+.+|...++-+... .+..+++++.+ =+.+.+.|.+++
T Consensus 187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~ 261 (264)
T COG0561 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLL 261 (264)
T ss_pred CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHh
Confidence 6888999999999999999999999999999999999998655444422 25556666555 345666666544
No 101
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.26 E-value=2.6e-12 Score=114.21 Aligned_cols=82 Identities=11% Similarity=0.099 Sum_probs=62.4
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcce--eecCHh--
Q 036723 183 NADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDY--ALESIH-- 256 (290)
Q Consensus 183 ~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~--v~~sl~-- 256 (290)
...+++++ +-.|..+++.+++++|++++++++|||+.||++|.+.+|.. +.++++.. +..|++ ++.+.+
T Consensus 178 ~~~eI~~~----g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~Na~~~vK~~A~~~~v~~~n~ed 252 (272)
T PRK15126 178 DCLEVLPV----GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRG-FIMGNAMPQLRAELPHLPVIGHCRNQ 252 (272)
T ss_pred cEEEeecC----CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCc-eeccCChHHHHHhCCCCeecCCCcch
Confidence 34456666 67889999999999999999999999999999999999985 55555443 445554 665544
Q ss_pred HHHHHhHHHHHhh
Q 036723 257 NIKEALPELWEVA 269 (290)
Q Consensus 257 el~~~l~~~~~~~ 269 (290)
-+.++|.+++...
T Consensus 253 Gva~~l~~~~~~~ 265 (272)
T PRK15126 253 AVSHYLTHWLDYP 265 (272)
T ss_pred HHHHHHHHHhcCC
Confidence 4777777776433
No 102
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.25 E-value=1.1e-10 Score=106.05 Aligned_cols=130 Identities=20% Similarity=0.250 Sum_probs=87.8
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc-C-------CCCcceeEEeecccCCCCCCccccccccccC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL-G-------LEDCFERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~-g-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
.+.+.||+.++|+.|+ ++++|+||.+...+...++.+ | +..+||.+++...=.. + |..
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~-------F----F~~ 250 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPG-------F----FTE 250 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCc-------c----cCC
Confidence 3566999999999986 789999999999999999996 7 7899999888653211 0 111
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-hcCCeEEEecC
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGK-RLGLHTVWVGT 241 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~-~aGi~~i~v~~ 241 (290)
..+...++...-..++.+.....++.+..- .-...+.+.+|+++++++||||++ .|+..++ .+||.++++-.
T Consensus 251 ~~pf~~v~~~~g~~~~~~~~~l~~g~vY~g---Gn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 251 GRPFRQVDVETGSLKWGEVDGLEPGKVYSG---GSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCceEEEeCCCCcccCCccccccCCCeEeC---CCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 122222222111111111111222212221 345677778899999999999999 8999998 99999999944
No 103
>PRK10976 putative hydrolase; Provisional
Probab=99.25 E-value=8e-11 Score=104.20 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=58.5
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc--eeecCHhH--
Q 036723 184 ADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD--YALESIHN-- 257 (290)
Q Consensus 184 ~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad--~v~~sl~e-- 257 (290)
..+++++ +..|..+++.+++++|++++++++|||+.||++|.+.+|... +++++.. +..|+ +++.+.+|
T Consensus 181 ~~eI~~~----gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~v-Am~NA~~~vK~~A~~~~v~~~n~edG 255 (266)
T PRK10976 181 CLEVMAG----GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGC-IMGNAHQRLKDLLPELEVIGSNADDA 255 (266)
T ss_pred eEEEEcC----CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCe-eecCCcHHHHHhCCCCeecccCchHH
Confidence 3455555 678899999999999999999999999999999999999864 4444443 44554 67766544
Q ss_pred HHHHhHHHH
Q 036723 258 IKEALPELW 266 (290)
Q Consensus 258 l~~~l~~~~ 266 (290)
+.+.|.+++
T Consensus 256 Va~~l~~~~ 264 (266)
T PRK10976 256 VPHYLRKLY 264 (266)
T ss_pred HHHHHHHHh
Confidence 555555543
No 104
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.24 E-value=2.8e-11 Score=107.36 Aligned_cols=71 Identities=11% Similarity=0.128 Sum_probs=57.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~~~l~~~~ 266 (290)
+..|..+++.+++++|++++++++|||+.||++|.+.+|...+ ++++.. +..|++++.+.++ +.+.|.+++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vA-m~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVA-MGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEE-ecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 6788899999999999999999999999999999999998644 444443 6678999877543 666665543
No 105
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.24 E-value=5.4e-11 Score=105.77 Aligned_cols=73 Identities=11% Similarity=0.064 Sum_probs=58.7
Q ss_pred CCCcHHHHHHHHHHcCC---CCCcEEEEcCCccchHHHHhcCCeEEEecCC-C------CCCCcceeecCHh--HHHHHh
Q 036723 195 CKPFEEAFEQVFKIANI---NPRKTIFFDDSIRNLETGKRLGLHTVWVGTS-H------RAEGVDYALESIH--NIKEAL 262 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~---~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~-~------~~~~ad~v~~sl~--el~~~l 262 (290)
+-.|..+++.+++++|+ +++++++|||+.||++|.+.+|..+++-+.. . .+..+++++...+ .+.+.|
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 67889999999999999 9999999999999999999999865554332 1 1235788887755 777777
Q ss_pred HHHHH
Q 036723 263 PELWE 267 (290)
Q Consensus 263 ~~~~~ 267 (290)
..++.
T Consensus 265 ~~~~~ 269 (271)
T PRK03669 265 DHFFS 269 (271)
T ss_pred HHHHh
Confidence 77664
No 106
>PLN02887 hydrolase family protein
Probab=99.21 E-value=1.1e-10 Score=113.22 Aligned_cols=76 Identities=12% Similarity=0.093 Sum_probs=59.3
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH--HH
Q 036723 184 ADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN--IK 259 (290)
Q Consensus 184 ~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e--l~ 259 (290)
..+++++ +..|..+++.+++++|++++++++|||+.||++|.+.+|.. ++++++.. +..|++|+.+.++ +.
T Consensus 498 ~lEI~p~----gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~g-VAMgNA~eeVK~~Ad~VT~sNdEDGVA 572 (580)
T PLN02887 498 MLEIVPP----GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLG-VALSNGAEKTKAVADVIGVSNDEDGVA 572 (580)
T ss_pred EEEEecC----CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCE-EEeCCCCHHHHHhCCEEeCCCCcCHHH
Confidence 3445555 68889999999999999999999999999999999999985 55555443 6668999876443 55
Q ss_pred HHhHH
Q 036723 260 EALPE 264 (290)
Q Consensus 260 ~~l~~ 264 (290)
++|.+
T Consensus 573 ~aLek 577 (580)
T PLN02887 573 DAIYR 577 (580)
T ss_pred HHHHH
Confidence 55544
No 107
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.19 E-value=5.6e-11 Score=108.20 Aligned_cols=87 Identities=17% Similarity=0.175 Sum_probs=77.0
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHh----cCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSR----LGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~----~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
++|++.++|+.|+ +.++|+|+++...+..+++. +++..+|+.+...
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~--------------------------- 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN--------------------------- 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---------------------------
Confidence 4678888888885 77899999999999999998 8888889887553
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
.||+++.++.+++++|+++++++||||+..|+.++++++-.
T Consensus 85 ---------------------~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ---------------------WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ---------------------cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 38999999999999999999999999999999999997753
No 108
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.19 E-value=5.3e-10 Score=98.73 Aligned_cols=122 Identities=14% Similarity=0.078 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCC
Q 036723 78 GYQFDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDK 154 (290)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~ 154 (290)
+..++.+.+.+.+.+ ..+.+.||+.++++.|+ ++++|+|++....++.+++.+|+...+..+++..-.....+
T Consensus 103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG 178 (277)
T TIGR01544 103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG 178 (277)
T ss_pred cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC
Confidence 344455555555532 45788999999999885 78999999999999999999998766666644321100000
Q ss_pred CccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCc-HHHHHHHHHHcC--CCCCcEEEEcCCccchHHHHh
Q 036723 155 GTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPF-EEAFEQVFKIAN--INPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~-~~~~~~il~~~~--~~~~e~i~iGDs~~Di~~a~~ 231 (290)
. ..| .+.|.+..-.| ...++...+.++ .++++|++||||.+|+.||..
T Consensus 179 -----------------v--ltG----------~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g 229 (277)
T TIGR01544 179 -----------------V--LKG----------FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADG 229 (277)
T ss_pred -----------------e--EeC----------CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcC
Confidence 0 000 00000001112 256667888888 899999999999999999877
Q ss_pred c
Q 036723 232 L 232 (290)
Q Consensus 232 a 232 (290)
+
T Consensus 230 ~ 230 (277)
T TIGR01544 230 V 230 (277)
T ss_pred C
Confidence 6
No 109
>PRK11590 hypothetical protein; Provisional
Probab=99.18 E-value=3.1e-10 Score=97.25 Aligned_cols=106 Identities=11% Similarity=-0.046 Sum_probs=69.6
Q ss_pred CCCChhHHHHH-HcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecc-cCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLL-LSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFET-LNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L-~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
+.++||+.+.| +.++ ++++|+||..+..++.++.++++.. .+.+++.+- ...+++ +
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~------------------~ 154 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGW------------------V 154 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccE------------------E
Confidence 56799999999 4553 6899999999999999999998632 334444331 100000 0
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.+.+ -.|.-|...++..+ +.+...+.+.|||.+|+.|...+|-+ ++|+..
T Consensus 155 -----~g~~----------c~g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vnp~ 204 (211)
T PRK11590 155 -----LTLR----------CLGHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHR-WRVTPR 204 (211)
T ss_pred -----CCcc----------CCChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCC-EEECcc
Confidence 0000 11344444444444 56777889999999999999999974 555543
No 110
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.17 E-value=5.1e-10 Score=92.56 Aligned_cols=65 Identities=20% Similarity=0.293 Sum_probs=55.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC-----CCCcceeecCHhHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR-----AEGVDYALESIHNIK 259 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~-----~~~ad~v~~sl~el~ 259 (290)
+||++.+++.++++++++++..++|||+++|+++|.++|+..+.+.++.. ....+++..++.++.
T Consensus 104 RKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 104 RKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred cCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 79999999999999999999999999999999999999999877766543 223567777777776
No 111
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.16 E-value=1.5e-09 Score=88.20 Aligned_cols=197 Identities=13% Similarity=0.187 Sum_probs=126.0
Q ss_pred CCccEEEEecCCCcccCC---CChHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHcccH--HHHHHc-------CC-
Q 036723 13 QKYDCLLFDLDDTIYPLT---SGLSKEVTKNIQEYMLQKLCIEEAKVPELCVSLYKFYGTTL--AGLRAI-------GY- 79 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~---~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~--~~~~~~-------~~- 79 (290)
.+.|++++|+.||....+ +.+++...+.+..++.+..+.++. ........+..|... +.+.++ +.
T Consensus 2 ~m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v--~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K 79 (229)
T COG4229 2 VMVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEV--KKIVDEVLSEFGIANSEEALVALLLEWIAEDSK 79 (229)
T ss_pred cchhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChh--hHHHHHHHHHhCccchHHHHHHHHHHHHhcccc
Confidence 346999999999998633 345566666666655555444332 223344445555443 211111 10
Q ss_pred CCCHHHHHHHHhhc-C--CCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc---CCCCcceeEEeecccC
Q 036723 80 QFDCDDFHSYVHGR-L--PYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL---GLEDCFERIISFETLN 150 (290)
Q Consensus 80 ~~~~~~~~~~~~~~-~--~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~ 150 (290)
......+.-.+... . ..-+..++|++.+.+++.+ .+++|+|+++...++..+.+. ++..+|++.+-. +.+
T Consensus 80 ~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG 158 (229)
T COG4229 80 DTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG 158 (229)
T ss_pred cchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc
Confidence 01111111111111 1 0114578999999998775 889999999988877666444 344566665433 122
Q ss_pred CCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 036723 151 STDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
.|.....|..+++..|++|.+++|+.|.+..+.+|+
T Consensus 159 --------------------------------------------~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~ 194 (229)
T COG4229 159 --------------------------------------------KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAA 194 (229)
T ss_pred --------------------------------------------ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHH
Confidence 577889999999999999999999999999999999
Q ss_pred hcCCeEEEecCCCCCCCc----ceeecCHh
Q 036723 231 RLGLHTVWVGTSHRAEGV----DYALESIH 256 (290)
Q Consensus 231 ~aGi~~i~v~~~~~~~~a----d~v~~sl~ 256 (290)
.+|+.++.+.++....-+ ..+++|+.
T Consensus 195 ~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 195 GVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred hcchheeeeecCCCCCCCCCcCceeeechh
Confidence 999999988765542222 35566665
No 112
>PRK08238 hypothetical protein; Validated
Probab=99.16 E-value=9.1e-10 Score=104.95 Aligned_cols=97 Identities=19% Similarity=0.178 Sum_probs=75.2
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..++..|++.++++.++ .+++++|+.++..++.+++++|+ |+.+++++.....
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~--------------------- 124 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNL--------------------- 124 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCcccc---------------------
Confidence 34567899999999986 67999999999999999999987 8999988754420
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
.++||++. +.+.++ .++++++||+.+|+.+++.+| ..+.|+.+.
T Consensus 125 --------------------kg~~K~~~---l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 125 --------------------KGAAKAAA---LVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred --------------------CCchHHHH---HHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 13444444 335554 356899999999999999999 577777664
No 113
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.15 E-value=7.3e-10 Score=92.73 Aligned_cols=217 Identities=12% Similarity=0.104 Sum_probs=127.0
Q ss_pred cCCCccEEEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCccc---HHHHHHHHHHHHcccH-HHHHHcCCCCCHHHH
Q 036723 11 SNQKYDCLLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEAK---VPELCVSLYKFYGTTL-AGLRAIGYQFDCDDF 86 (290)
Q Consensus 11 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~~---~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ 86 (290)
+.++.-+++||+|-||+|.+...+- .+.++..... ...+.+.+|..+...+ ..+- ......+++
T Consensus 9 ~~~~ril~~FDFD~TIid~dSD~wV----------v~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lh--eqgv~~~~i 76 (256)
T KOG3120|consen 9 SSSPRILLVFDFDRTIIDQDSDNWV----------VDELPTTDLFNQLRDTYPKGFWNELMDRVFKELH--EQGVRIAEI 76 (256)
T ss_pred ccCCcEEEEEecCceeecCCcchHH----------HHhcccchhHHHHHHhcccchHHHHHHHHHHHHH--HcCCCHHHH
Confidence 3345679999999999985544332 2222221110 0111122233322111 1111 233445555
Q ss_pred HHHHhhcCCCCCCCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccc
Q 036723 87 HSYVHGRLPYMMLKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 87 ~~~~~~~~~~~~~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
.+.+ ..++..||+.++++.++ +.+.|+|......++.+++++++.+.|..|++.-.
T Consensus 77 k~~~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa-------------- 136 (256)
T KOG3120|consen 77 KQVL------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPA-------------- 136 (256)
T ss_pred HHHH------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCc--------------
Confidence 5545 55788999999998885 46889999999999999999999999998887432
Q ss_pred cccCCCCCccccccc-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHH---HcCCCCCcEEEEcCCccchHHHHhcCCe-EE
Q 036723 163 ASESERPTELFDIDD-YCSRPNADLELPRTPVVCKPFEEAFEQVFK---IANINPRKTIFFDDSIRNLETGKRLGLH-TV 237 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~---~~~~~~~e~i~iGDs~~Di~~a~~aGi~-~i 237 (290)
.++..+..-+.+.+. |=|..++.+.++ ...+..+.. +-|++-++.+|+||+-||+......--. ++
T Consensus 137 ~~da~G~L~v~pyH~~hsC~~CPsNmCK---------g~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~a 207 (256)
T KOG3120|consen 137 CVDASGRLLVRPYHTQHSCNLCPSNMCK---------GLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVA 207 (256)
T ss_pred ccCCCCcEEeecCCCCCccCcCchhhhh---------hHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCcee
Confidence 122222222223222 223333333332 244444443 3477888999999999999877665443 55
Q ss_pred EecCCCC----------CCCc-ceeecCHhHHHHHhHHHHHh
Q 036723 238 WVGTSHR----------AEGV-DYALESIHNIKEALPELWEV 268 (290)
Q Consensus 238 ~v~~~~~----------~~~a-d~v~~sl~el~~~l~~~~~~ 268 (290)
+...++. .-+| -..++|=.|+...|.+++..
T Consensus 208 mpRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 208 MPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLIKT 249 (256)
T ss_pred cccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHHHH
Confidence 5555553 1122 23467777888877776554
No 114
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.13 E-value=1.6e-10 Score=110.73 Aligned_cols=89 Identities=24% Similarity=0.353 Sum_probs=72.3
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCch------------HHHHHHHHhcCCCCcceeEEeecccCCCCCCcccccccccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADK------------THAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
++||+.+.|+.|+ ++++|+||... ..+..+++.+|+. |+.+++.+....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 4578888888884 89999999766 4567788888885 887776553322
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcC----CCCCcEEEEcCCccchHHHHhcCC
Q 036723 166 SERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIAN----INPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~----~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
+||++.++..++++++ +++++++||||+..|+++++.+|-
T Consensus 262 -----------------------------RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 262 -----------------------------RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred -----------------------------CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 7999999999999985 899999999999999888777664
No 115
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.09 E-value=3.7e-10 Score=97.18 Aligned_cols=43 Identities=16% Similarity=-0.009 Sum_probs=38.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+..|+.+++.+++++|++++++++|||+.||++|++.+|...+
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 4556788999999999999999999999999999999998654
No 116
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.06 E-value=2e-10 Score=91.17 Aligned_cols=104 Identities=23% Similarity=0.432 Sum_probs=81.3
Q ss_pred HHHHHcCCCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCC
Q 036723 106 RNLLLSLPIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNAD 185 (290)
Q Consensus 106 ~~~L~~L~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (290)
.+++..++++++|+|+.....++...+.+|+...|.++
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~------------------------------------------ 81 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI------------------------------------------ 81 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech------------------------------------------
Confidence 45667778999999999999999999999987554322
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC------HhH
Q 036723 186 LELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES------IHN 257 (290)
Q Consensus 186 ~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s------l~e 257 (290)
+.+...++.+++++++.+++|.||||..+|+...+.+|++++ +..++. ...++||+.. +.|
T Consensus 82 ----------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a-~~dAh~~v~~~a~~Vt~~~GG~GAvRE 150 (170)
T COG1778 82 ----------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA-VADAHPLLKQRADYVTSKKGGEGAVRE 150 (170)
T ss_pred ----------HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc-ccccCHHHHHhhHhhhhccCcchHHHH
Confidence 445689999999999999999999999999999999999754 333332 4456666544 445
Q ss_pred HHHHh
Q 036723 258 IKEAL 262 (290)
Q Consensus 258 l~~~l 262 (290)
+.++|
T Consensus 151 v~dli 155 (170)
T COG1778 151 VCDLI 155 (170)
T ss_pred HHHHH
Confidence 55544
No 117
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.99 E-value=1.7e-08 Score=86.37 Aligned_cols=106 Identities=10% Similarity=-0.040 Sum_probs=68.5
Q ss_pred CCCChhHHHHHH-cCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeec-ccCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLLL-SLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFE-TLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L~-~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
..++|++.+.|+ .++ .+++|+||.+...++.+.+..++... +.+++.+ +...+ +.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~~g------------------g~~ 153 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERGNG------------------GWV 153 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEeCC------------------ceE
Confidence 467899999995 553 78999999999999999988765332 2333332 11100 110
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.+ .+ -.|.-|...++..+ +.+.+.+.+.|||.+|+.|...+|-+ ++|+..
T Consensus 154 --~g---~~----------c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vnp~ 203 (210)
T TIGR01545 154 --LP---LR----------CLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHR-WRVSKR 203 (210)
T ss_pred --cC---cc----------CCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCc-EEECcc
Confidence 00 00 11344445555444 44667789999999999999999975 555443
No 118
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.94 E-value=1.7e-08 Score=88.58 Aligned_cols=50 Identities=16% Similarity=0.180 Sum_probs=44.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
+++|..+++.+++++|++++++++|||+.||++|++.++..+++++++..
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 68999999999999999999999999999999999997766788877653
No 119
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.94 E-value=1e-09 Score=96.69 Aligned_cols=67 Identities=15% Similarity=0.137 Sum_probs=53.0
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHh
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIH 256 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~ 256 (290)
.+++++ +..|..+++.+++++|++++++++|||+.||++|++.+|+.+++. ++.. +..+++++.+.+
T Consensus 180 leI~~~----~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~ 248 (256)
T TIGR00099 180 IEITAK----GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNN 248 (256)
T ss_pred EEecCC----CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCC
Confidence 345555 677899999999999999999999999999999999999975553 3332 445777776643
No 120
>PTZ00445 p36-lilke protein; Provisional
Probab=98.89 E-value=7.3e-09 Score=87.01 Aligned_cols=50 Identities=24% Similarity=0.416 Sum_probs=46.7
Q ss_pred CCCCcHHH--H--HHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 194 VCKPFEEA--F--EQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 194 ~~Kp~~~~--~--~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+.||+|.+ | +.+++++|++|++++||+|+..++++|+++|+.++.+..+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 47999999 9 99999999999999999999999999999999999997654
No 121
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.83 E-value=3.1e-08 Score=87.37 Aligned_cols=84 Identities=17% Similarity=0.184 Sum_probs=62.3
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchH---HHHHHHHhcCCCCcc-eeEEeecccCCCCCCccccccccccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKT---HAARVLSRLGLEDCF-ERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~---~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
...++||+.++|+.|+ .+++++||.... .....++.+|+...+ +.++..+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~---------------------- 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD---------------------- 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC----------------------
Confidence 4578899999999774 789999998744 344678888987543 44544321
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHh
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~ 231 (290)
.++++...+.+.+.+++ +++|||+.+|+..+..
T Consensus 174 ------------------------~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 174 ------------------------KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDFFY 206 (266)
T ss_pred ------------------------CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhhhc
Confidence 35566888888888887 9999999999976543
No 122
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.82 E-value=2.8e-09 Score=87.67 Aligned_cols=99 Identities=20% Similarity=0.353 Sum_probs=68.4
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeC-CchHHHHHHHHhcCCC----------CcceeEEeecccCCCCCCccccccc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTN-ADKTHAARVLSRLGLE----------DCFERIISFETLNSTDKGTVLVDQD 162 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~-~~~~~~~~~l~~~gl~----------~~f~~i~~~~~~~~~~~~~~~~~~~ 162 (290)
+.+.++|++.+.|+.|+ .+++++|. .....+..+|+.+++. ++|+.. +++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~----eI~------------ 105 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYL----EIY------------ 105 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEE----EES------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchh----hee------------
Confidence 56788999999999886 78999994 4567888999999998 566552 122
Q ss_pred cccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 163 ASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
...|..-|+.+.+..|++.++++||+|-.++++.....|..++++.+|
T Consensus 106 --------------------------------~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 106 --------------------------------PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp --------------------------------SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred --------------------------------cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 235678999999999999999999999999999999999999999875
Q ss_pred C
Q 036723 243 H 243 (290)
Q Consensus 243 ~ 243 (290)
-
T Consensus 154 l 154 (169)
T PF12689_consen 154 L 154 (169)
T ss_dssp -
T ss_pred C
Confidence 4
No 123
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.81 E-value=8.1e-08 Score=84.63 Aligned_cols=70 Identities=19% Similarity=0.065 Sum_probs=52.6
Q ss_pred CCCcHHHHHHHHHHcCCC--CCcEEEEcCCccchHHHHhcCCeEEEecCCC----CCCC--c-ceeecC--HhHHHHHhH
Q 036723 195 CKPFEEAFEQVFKIANIN--PRKTIFFDDSIRNLETGKRLGLHTVWVGTSH----RAEG--V-DYALES--IHNIKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~--~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~----~~~~--a-d~v~~s--l~el~~~l~ 263 (290)
+..|..+++.+++++|++ .+++++|||+.||+.|++.+|..+++-+... -+.. + ++++.+ -+-+.+.|.
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 577889999999999999 9999999999999999999998765555432 2333 3 477755 234555554
Q ss_pred H
Q 036723 264 E 264 (290)
Q Consensus 264 ~ 264 (290)
+
T Consensus 254 ~ 254 (256)
T TIGR01486 254 H 254 (256)
T ss_pred H
Confidence 4
No 124
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.81 E-value=4.3e-08 Score=85.31 Aligned_cols=68 Identities=16% Similarity=0.036 Sum_probs=51.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc----eeecCH--hHHHHHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD----YALESI--HNIKEALP 263 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad----~v~~sl--~el~~~l~ 263 (290)
+++|+.+++.+++++|++++++++|||+.||+.|++.+|... .++++.. +..++ +++.+- +-+.+.|.
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~i-av~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGV-VVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEE-EEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688999999999999999999999999999999999999754 4555443 33455 666542 23555443
No 125
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.80 E-value=4e-08 Score=80.54 Aligned_cols=46 Identities=24% Similarity=0.462 Sum_probs=38.7
Q ss_pred CCCcHHHHHHHHHHcCC-----CCCcEEEEcCCc-cchHHHHhcCCeEEEecCC
Q 036723 195 CKPFEEAFEQVFKIANI-----NPRKTIFFDDSI-RNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~-----~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~ 242 (290)
.|| ..++.+++.++. +|+|+++|||.+ +|+-+|+.+|+.++|+..|
T Consensus 115 kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 115 KKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred CCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 366 666677777654 499999999999 8999999999999999765
No 126
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.76 E-value=1.7e-08 Score=84.38 Aligned_cols=95 Identities=23% Similarity=0.272 Sum_probs=60.8
Q ss_pred hhHHHHHHcC---CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccC
Q 036723 103 PVLRNLLLSL---PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYC 179 (290)
Q Consensus 103 pg~~~~L~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
|++.++++.+ +.+++|+|++....+..+++.+|+...+ +++.+-.... + ......+.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~-~--------------~~~~~~~~~-- 152 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNG-G--------------GIFTGRITG-- 152 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTT-C--------------CEEEEEEEE--
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecc-c--------------ceeeeeECC--
Confidence 6666999776 4889999999999999999999987422 2222210000 0 000000000
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHH---HHHcCCCCCcEEEEcCCccchHHHH
Q 036723 180 SRPNADLELPRTPVVCKPFEEAFEQV---FKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 180 ~~~~~~~~~~~~~~~~Kp~~~~~~~i---l~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
...+ -|...++.+ ... +.+...++++|||.+|+.|++
T Consensus 153 ------------~~~~-~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 153 ------------SNCG-GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ------------EEES-HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred ------------CCCC-cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 0001 256777777 445 888899999999999999985
No 127
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.74 E-value=2.3e-08 Score=86.59 Aligned_cols=62 Identities=23% Similarity=0.300 Sum_probs=51.5
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecCHhH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALESIHN 257 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~sl~e 257 (290)
+--|..+++.+++.+|++++++++|||+.||++|.+.+|.. +.++++.. +..|++++.+..+
T Consensus 184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcCCCHHHHHhCCEEecCCCC
Confidence 56778999999999999999999999999999999999985 55555443 5567888877665
No 128
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.68 E-value=5.9e-07 Score=79.70 Aligned_cols=72 Identities=18% Similarity=0.223 Sum_probs=61.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc----CCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHhh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL----GLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a----Gi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
+..|..+++.+++++|++.+++++|||+.||+.|++.+ |+ ++.++.+. ..|.+.+++.+++..+|..+....
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~-~vavg~a~--~~A~~~l~~~~~v~~~L~~l~~~~ 247 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGI-SVKVGTGA--TQASWRLAGVPDVWSWLEMITTAQ 247 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCe-EEEECCCC--CcCeEeCCCHHHHHHHHHHHHHhh
Confidence 46778999999999999999999999999999999998 54 56666543 568999999999999998887555
No 129
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.65 E-value=4.3e-08 Score=95.64 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=41.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEE--cCCccchHHHHhcCCeEEEecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFF--DDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~i--GDs~~Di~~a~~aGi~~i~v~~ 241 (290)
+-.|..+++.+++.++++.++++.| ||+.||+.|.+.+|..++.-+.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 4677899999999999999999999 9999999999999997655433
No 130
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.57 E-value=3.3e-08 Score=81.17 Aligned_cols=96 Identities=17% Similarity=0.094 Sum_probs=80.5
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCC-cceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+...||+.++|+.|. +.++|+|++.+.+++.+++.++... .|+.+++.+....
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~------------------------ 96 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF------------------------ 96 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE------------------------
Confidence 567899999999996 7899999999999999999999875 8888887665432
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
.+++ +...++.+|.+++++++|||+..++.++..+|+.+....
T Consensus 97 -------------------~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 97 -------------------TNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred -------------------eCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 2333 556678889999999999999999999999999876554
No 131
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.52 E-value=3.1e-07 Score=79.52 Aligned_cols=43 Identities=9% Similarity=0.129 Sum_probs=36.3
Q ss_pred CCCcHHHHHHHHHHcCC--CCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIANI--NPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~--~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+--|+.+++.+++.+++ +++++++|||+.||+.|.+.+|+..+
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 35557888899998876 67799999999999999999998643
No 132
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.51 E-value=3.2e-06 Score=69.20 Aligned_cols=140 Identities=13% Similarity=0.079 Sum_probs=84.9
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee--EEeecccCCCCCCccccccccccCCCCCcc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER--IISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
.+..-||..+++++.+ ++.+|+|+|....+..++++.+-.+..+. +++.+. .. ...++
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~-~i----------------h~dg~ 133 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND-YI----------------HIDGQ 133 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc-eE----------------cCCCc
Confidence 3577799999998886 88999999999999999988863332222 222221 11 00111
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE---EecCCCCCCCcc
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV---WVGTSHRAEGVD 249 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i---~v~~~~~~~~ad 249 (290)
..+-.+.. ...++.|+ . ..+.+.-+++.++|.|||.+|+.+|+...+-++ +++.=..+..+-
T Consensus 134 h~i~~~~d---------s~fG~dK~--~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f 198 (220)
T COG4359 134 HSIKYTDD---------SQFGHDKS--S----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNF 198 (220)
T ss_pred eeeecCCc---------cccCCCcc--h----hHHHhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCC
Confidence 11111110 00112333 3 344455577779999999999999999886433 111111233445
Q ss_pred eeecCHhHHHHHhHHHHHhh
Q 036723 250 YALESIHNIKEALPELWEVA 269 (290)
Q Consensus 250 ~v~~sl~el~~~l~~~~~~~ 269 (290)
.-++++.|+..-+.++++.-
T Consensus 199 ~~fe~F~eIlk~iekvl~~~ 218 (220)
T COG4359 199 LEFETFYEILKEIEKVLEVQ 218 (220)
T ss_pred cccccHHHHHHHHHHHHhhh
Confidence 55778888888888877654
No 133
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.47 E-value=4.4e-07 Score=88.32 Aligned_cols=110 Identities=18% Similarity=0.282 Sum_probs=83.3
Q ss_pred CCCChhHHHHHHcCC---C-cEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP---I-RKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~-~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++||+.+.++.|+ + +++++|+.+...+...++.+|+..+|..+.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~------------------------------ 410 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL------------------------------ 410 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC------------------------------
Confidence 467899999999985 7 899999999999999999999987664221
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec-CCCC--CCCccee
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG-TSHR--AEGVDYA 251 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~-~~~~--~~~ad~v 251 (290)
+.++.. ++++++.+.++++||||+.||+.+++.+|+. +.++ .+.. ...+|++
T Consensus 411 --------------------p~~K~~----~i~~l~~~~~~v~~vGDg~nD~~al~~A~vg-ia~g~~~~~~~~~~ad~v 465 (536)
T TIGR01512 411 --------------------PEDKLE----IVKELREKYGPVAMVGDGINDAPALAAADVG-IAMGASGSDVAIETADVV 465 (536)
T ss_pred --------------------cHHHHH----HHHHHHhcCCEEEEEeCCHHHHHHHHhCCEE-EEeCCCccHHHHHhCCEE
Confidence 123334 4445555568999999999999999999974 3333 2222 4568888
Q ss_pred e--cCHhHHHHHhH
Q 036723 252 L--ESIHNIKEALP 263 (290)
Q Consensus 252 ~--~sl~el~~~l~ 263 (290)
+ +++.+|.+.+.
T Consensus 466 l~~~~l~~l~~~i~ 479 (536)
T TIGR01512 466 LLNDDLSRLPQAIR 479 (536)
T ss_pred EECCCHHHHHHHHH
Confidence 8 88998887554
No 134
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.47 E-value=2.1e-07 Score=76.18 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=34.4
Q ss_pred CCCcHHHHHHHHHHcCC----CCCcEEEEcCC-----------ccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIANI----NPRKTIFFDDS-----------IRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~----~~~e~i~iGDs-----------~~Di~~a~~aGi~~i 237 (290)
+||.+.+++.+++.++. +.++.+||||+ ..|.+-|.++|+++.
T Consensus 96 RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 96 RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 89999999999999874 99999999996 578999999999753
No 135
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.42 E-value=2e-06 Score=76.15 Aligned_cols=110 Identities=16% Similarity=0.163 Sum_probs=70.3
Q ss_pred hhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCC-CccccccccccCCCCCcccccccc
Q 036723 103 PVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDK-GTVLVDQDASESERPTELFDIDDY 178 (290)
Q Consensus 103 pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
||+.++|+.|+ ++++|+|++.+..+...++.+|+..+|+.++++++...... ....+..++..+....=.+|..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~-- 226 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTT-- 226 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCC--
Confidence 56666666664 77899999999999999999999999999999888754211 0001222222222222223321
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCC-cEEEEcCCc-cch
Q 036723 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPR-KTIFFDDSI-RNL 226 (290)
Q Consensus 179 ~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~-e~i~iGDs~-~Di 226 (290)
....+||. |......+++.|+.-= -+-.|+|-. ||+
T Consensus 227 -----~~~~lPKS-------prvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 227 -----DGKRLPKS-------PRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred -----CCCcCCCC-------CeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 12223332 6788888999999753 455666666 554
No 136
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.41 E-value=1.5e-06 Score=76.04 Aligned_cols=90 Identities=13% Similarity=0.012 Sum_probs=74.0
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHH--HHHHhcCCCC-cceeEEeecccCCCCCCccccccccccCCCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAA--RVLSRLGLED-CFERIISFETLNSTDKGTVLVDQDASESERPT 170 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~--~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (290)
....++||+.++|+.|+ ++++++||..+.... ..++.+|+.. +|+.+++++....
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~------------------- 81 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV------------------- 81 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH-------------------
Confidence 34567899999999986 689999999887665 7889999987 8999999875432
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
..+..++++++++++++++|||+..|++....+|.
T Consensus 82 -----------------------------~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 82 -----------------------------QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----------------------------HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 56677778889999999999999999988876664
No 137
>PTZ00174 phosphomannomutase; Provisional
Probab=98.41 E-value=1.1e-06 Score=77.21 Aligned_cols=45 Identities=11% Similarity=-0.063 Sum_probs=38.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDD----SIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGD----s~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+.-|..+++.++++ ++++++||| +.||++|.+.++...+.+.+++
T Consensus 186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHH
Confidence 67888999999998 589999999 8899999998888777776433
No 138
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.40 E-value=6.7e-07 Score=75.34 Aligned_cols=48 Identities=15% Similarity=0.203 Sum_probs=36.7
Q ss_pred EEEcCCccchHHHHhcCCeEEEecCCCCCCC-cceeecCHhHHHHHhHH
Q 036723 217 IFFDDSIRNLETGKRLGLHTVWVGTSHRAEG-VDYALESIHNIKEALPE 264 (290)
Q Consensus 217 i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~-ad~v~~sl~el~~~l~~ 264 (290)
++|+|++..+..+...|++++.+..+++... .-..+.+++|+.+.+-.
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i~~ 187 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLILS 187 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHHHH
T ss_pred EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHHHh
Confidence 7999999999999999999999988886433 36779999999887744
No 139
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.38 E-value=1.5e-06 Score=77.09 Aligned_cols=43 Identities=19% Similarity=0.091 Sum_probs=35.5
Q ss_pred CCcHHHHHHHHHHcCCC--CCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 196 KPFEEAFEQVFKIANIN--PRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~--~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
-+|..+++.+.+.++-. +-.++.+|||.||+.|.+.+.++.+-
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 46778888888887654 44799999999999999999987554
No 140
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.35 E-value=2e-06 Score=84.21 Aligned_cols=109 Identities=17% Similarity=0.264 Sum_probs=80.2
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
..++|++.++++.|+ ++++++|+.....++.+.+++|+. +| . + ..
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~----~-~-~~------------------------- 451 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR----A-E-VL------------------------- 451 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE----c-c-CC-------------------------
Confidence 367899999998885 789999999999999999999985 22 1 1 11
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee-
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL- 252 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~- 252 (290)
+++|.+.++.+. .++++|+||||+.||+.+++++|+. +.++.+.. ...+|+++
T Consensus 452 -------------------p~~K~~~v~~l~----~~~~~v~~VGDg~nD~~al~~A~vg-ia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 452 -------------------PDDKAALIKELQ----EKGRVVAMVGDGINDAPALAQADVG-IAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred -------------------hHHHHHHHHHHH----HcCCEEEEEeCCCccHHHHhhCCEE-EEeCCcCHHHHhhCCEEEe
Confidence 234455555543 3678999999999999999999985 44444432 45688888
Q ss_pred -cCHhHHHHHhH
Q 036723 253 -ESIHNIKEALP 263 (290)
Q Consensus 253 -~sl~el~~~l~ 263 (290)
+++.+|.+++.
T Consensus 508 ~~~l~~l~~~i~ 519 (562)
T TIGR01511 508 RNDLNDVATAID 519 (562)
T ss_pred CCCHHHHHHHHH
Confidence 47777776553
No 141
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.35 E-value=1.9e-06 Score=84.27 Aligned_cols=109 Identities=15% Similarity=0.236 Sum_probs=80.8
Q ss_pred CCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 99 LKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..++||+.++++.|+ ++++++|+.+...+..+++++|+..+|..+.
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~------------------------------ 432 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL------------------------------ 432 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC------------------------------
Confidence 467999999999883 6799999999999999999999977665431
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL 252 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~ 252 (290)
+++++..++. ++..+++|+||||+.||+.+++++|+...+ +.+.. ...+|+++
T Consensus 433 --------------------p~~K~~~v~~----l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~Ad~vi 487 (556)
T TIGR01525 433 --------------------PEDKLAIVKE----LQEEGGVVAMVGDGINDAPALAAADVGIAM-GAGSDVAIEAADIVL 487 (556)
T ss_pred --------------------HHHHHHHHHH----HHHcCCEEEEEECChhHHHHHhhCCEeEEe-CCCCHHHHHhCCEEE
Confidence 1233444444 444667999999999999999999964433 33322 44688888
Q ss_pred c--CHhHHHHHh
Q 036723 253 E--SIHNIKEAL 262 (290)
Q Consensus 253 ~--sl~el~~~l 262 (290)
. ++..+.+++
T Consensus 488 ~~~~~~~l~~~i 499 (556)
T TIGR01525 488 LNDDLSSLPTAI 499 (556)
T ss_pred eCCCHHHHHHHH
Confidence 7 577776654
No 142
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.27 E-value=6.9e-06 Score=77.62 Aligned_cols=128 Identities=20% Similarity=0.251 Sum_probs=70.5
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc-C--------CCCcceeEEeecccCCCCCCcccccccccc
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL-G--------LEDCFERIISFETLNSTDKGTVLVDQDASE 165 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~-g--------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 165 (290)
.+...|.+..+|+.|+ .+++++||.+-.++...++.+ | ..++||.|++...=. .|.
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP------------~FF 248 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKP------------GFF 248 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CC------------HHH
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCC------------ccc
Confidence 3455788888888886 579999999999999998776 2 346899988754311 011
Q ss_pred CCCCCccccccccCCCCCC---CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhc-CCeEEEec
Q 036723 166 SERPTELFDIDDYCSRPNA---DLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRL-GLHTVWVG 240 (290)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~a-Gi~~i~v~ 240 (290)
.+.. .++......+.+.. ...+.++.+.. ..-...+.+.+|....+++||||++ .||...+.. ||.|++|-
T Consensus 249 ~~~~-pfr~vd~~~g~l~~~~~~~~l~~g~vY~---gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 249 TEGR-PFREVDTETGKLKWGKYVGPLEKGKVYS---GGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp CT----EEEEETTTSSEECS---SS--TC-EEE---E--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred CCCC-ceEEEECCCCccccccccccccCCCEee---cCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 1111 11111111111110 11222221222 2345566777889899999999999 899888776 99999994
Q ss_pred C
Q 036723 241 T 241 (290)
Q Consensus 241 ~ 241 (290)
.
T Consensus 325 ~ 325 (448)
T PF05761_consen 325 P 325 (448)
T ss_dssp T
T ss_pred h
Confidence 4
No 143
>PLN02382 probable sucrose-phosphatase
Probab=98.23 E-value=1e-05 Score=76.18 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=43.1
Q ss_pred CCCcHHHHHHHHHHc---CCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 195 CKPFEEAFEQVFKIA---NINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~---~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
+-.|..+++.+++++ |++++++++|||+.||++|.+.+|...+.++++..
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~ 225 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQE 225 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcH
Confidence 566789999999999 99999999999999999999999954566666553
No 144
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.22 E-value=9.4e-06 Score=72.03 Aligned_cols=110 Identities=18% Similarity=0.207 Sum_probs=70.9
Q ss_pred hhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCcc-ccccccccCCCCCcccccccc
Q 036723 103 PVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTV-LVDQDASESERPTELFDIDDY 178 (290)
Q Consensus 103 pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 178 (290)
|++.++|+.|+ ++++|+||+.+..+...++.+|+..+|+.++++++.....+..+ .+.+++..+-...=.+|...
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~- 229 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD- 229 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc-
Confidence 45556665554 78999999999999999999999999999999887654221111 23333333333333343332
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCc-cch
Q 036723 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINP-RKTIFFDDSI-RNL 226 (290)
Q Consensus 179 ~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~-~Di 226 (290)
...+|| .|......+++.|+.- +-+-.|+|-. ||+
T Consensus 230 ------~~~lPK-------SprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 230 ------VKNLPK-------SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred ------ccCCCC-------CCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 112222 2678888899999975 3455677766 554
No 145
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.18 E-value=5.8e-06 Score=72.40 Aligned_cols=70 Identities=14% Similarity=0.180 Sum_probs=61.9
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc-------CCeEEEecCCCCCCCcceeecCHhHHHHHhHHH
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL-------GLHTVWVGTSHRAEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a-------Gi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~ 265 (290)
-.|..+++.++++++++++++++|||+.+|+.|++.+ |..++.+..+.....|++++++.+++.++|..+
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l 242 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLL 242 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHH
Confidence 3456999999999999999999999999999999999 667888876766788999999999999988765
No 146
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.17 E-value=6.4e-06 Score=83.10 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC--eEEEecCCCCCCCcceeecCHhHHHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL--HTVWVGTSHRAEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi--~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~ 266 (290)
+..|..+++.+++ +++++.+++|||+.||+.|++.++. .++.++. ....|++++++.+|+.+.|..+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~--~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP--GESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC--CCCcceEeCCCHHHHHHHHHHHh
Confidence 4567899999998 7788999999999999999999743 3455544 45778999999999999888765
No 147
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.13 E-value=1.1e-05 Score=82.52 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=80.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+......+.+.+.+|+...|..+.
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~-------------------------------- 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL-------------------------------- 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC--------------------------------
Confidence 66899999998885 7899999999999999999999875443211
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc--eee
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD--YAL 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad--~v~ 252 (290)
| +.-..++++++.++++++||||+.||+.+++.+|+. +.++++.. ...+| +..
T Consensus 698 --------------------p--~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvg-ia~g~g~~~a~~~ad~vl~~ 754 (834)
T PRK10671 698 --------------------P--DGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVG-IAMGGGSDVAIETAAITLMR 754 (834)
T ss_pred --------------------H--HHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCee-EEecCCCHHHHHhCCEEEec
Confidence 1 112345666667788999999999999999999994 44444433 23344 455
Q ss_pred cCHhHHHHHhH
Q 036723 253 ESIHNIKEALP 263 (290)
Q Consensus 253 ~sl~el~~~l~ 263 (290)
+++.+|.+++.
T Consensus 755 ~~~~~i~~~i~ 765 (834)
T PRK10671 755 HSLMGVADALA 765 (834)
T ss_pred CCHHHHHHHHH
Confidence 77888887765
No 148
>PLN02423 phosphomannomutase
Probab=98.11 E-value=4.6e-05 Score=66.82 Aligned_cols=42 Identities=12% Similarity=-0.095 Sum_probs=36.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHhcCCeEEEecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDD----SIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGD----s~~Di~~a~~aGi~~i~v~~ 241 (290)
+..|..+++.++ +++++++||| +.||++|.+.-|+.++.|..
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 577788888887 8999999999 68999999998988877743
No 149
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.10 E-value=3e-05 Score=60.08 Aligned_cols=114 Identities=13% Similarity=0.119 Sum_probs=87.2
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
-.+++.+.+.++.|+ ..++|.|+.....+....+..|+.. ++++.
T Consensus 29 Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~~--~rv~a------------------------------- 75 (152)
T COG4087 29 GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIPV--ERVFA------------------------------- 75 (152)
T ss_pred cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCce--eeeec-------------------------------
Confidence 466778888887776 7788888888888888888888652 33322
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC----CCCcceee
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR----AEGVDYAL 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~----~~~ad~v~ 252 (290)
-.++..=..+++.++-+.+.|++|||+.||+.+.+++.+..|-+..... ...+|+++
T Consensus 76 -------------------~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvi 136 (152)
T COG4087 76 -------------------GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136 (152)
T ss_pred -------------------ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhh
Confidence 2234666788888988889999999999999999999988776665433 34589999
Q ss_pred cCHhHHHHHhHH
Q 036723 253 ESIHNIKEALPE 264 (290)
Q Consensus 253 ~sl~el~~~l~~ 264 (290)
+++.|+.+++..
T Consensus 137 k~i~e~ldl~~~ 148 (152)
T COG4087 137 KEIAEILDLLKD 148 (152)
T ss_pred hhHHHHHHHhhc
Confidence 999999887643
No 150
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.07 E-value=1.5e-05 Score=82.05 Aligned_cols=137 Identities=19% Similarity=0.316 Sum_probs=94.5
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+..|+...++.+++..++... ..+.....
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~------------~~~~l~~~---- 591 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM------------DDQQLSQI---- 591 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC------------CHHHHHHH----
Confidence 67899999998885 889999999999999999999998777666665544320 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec-CCCC--CCCcceee-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG-TSHR--AEGVDYAL- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~-~~~~--~~~ad~v~- 252 (290)
.....+.+...|+--..+.+.++-..+.++|+||+.||+.+++.|++... ++ .+.. +..+|+++
T Consensus 592 -----------~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia-~g~~g~~va~~aaDivl~ 659 (884)
T TIGR01522 592 -----------VPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVA-MGQTGTDVAKEAADMILT 659 (884)
T ss_pred -----------hhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEe-cCCCcCHHHHHhcCEEEc
Confidence 01111234455565566666666666889999999999999999997543 33 2332 45689998
Q ss_pred -cCHhHHHHHhHH
Q 036723 253 -ESIHNIKEALPE 264 (290)
Q Consensus 253 -~sl~el~~~l~~ 264 (290)
+++..+.+++.+
T Consensus 660 dd~~~~i~~~i~~ 672 (884)
T TIGR01522 660 DDDFATILSAIEE 672 (884)
T ss_pred CCCHHHHHHHHHH
Confidence 558888776644
No 151
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.06 E-value=2e-05 Score=69.22 Aligned_cols=48 Identities=25% Similarity=0.237 Sum_probs=38.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
+-.|..+++.+++++++++++++++|||.||+.|. ..+...|.|++..
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 45678999999999999999999999999999999 6666788887754
No 152
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.81 E-value=0.0002 Score=60.82 Aligned_cols=103 Identities=13% Similarity=0.178 Sum_probs=79.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
..++++...++..+ .+++|+|++.....+.+..+.+-.+.-..+.+.-+...+
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG------------------------ 178 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIG------------------------ 178 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcccc------------------------
Confidence 66889999998875 789999999998888777666433221111111111111
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~ 244 (290)
.|...+.|..+.+..|.++.+++++-|-..-..+|+.+|+.+..+.++.+
T Consensus 179 ------------------~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgn 228 (254)
T KOG2630|consen 179 ------------------LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGN 228 (254)
T ss_pred ------------------ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCC
Confidence 57778999999999999999999999999999999999999888866654
No 153
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.78 E-value=0.00081 Score=64.69 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=56.9
Q ss_pred CChhHHHHHHcCCCcEEEEeCCchHHHHHHHHh-cCCCCcceeEEeecccC-CCCCCccccccccccCCCCCcccccccc
Q 036723 101 PDPVLRNLLLSLPIRKVIFTNADKTHAARVLSR-LGLEDCFERIISFETLN-STDKGTVLVDQDASESERPTELFDIDDY 178 (290)
Q Consensus 101 ~~pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (290)
..|.+.+.++..+. .+++|..++.+++...+. +|++ .+++.+-.. ..+. + .|.
T Consensus 111 l~~~a~~~~~~~g~-~vvVSASp~~~Vepfa~~~LGid----~VIgTeLev~~~G~------------------~--TG~ 165 (497)
T PLN02177 111 VHPETWRVFNSFGK-RYIITASPRIMVEPFVKTFLGAD----KVLGTELEVSKSGR------------------A--TGF 165 (497)
T ss_pred cCHHHHHHHHhCCC-EEEEECCcHHHHHHHHHHcCCCC----EEEecccEECcCCE------------------E--eee
Confidence 55677777777654 499999999999999965 7764 343332100 0000 0 000
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCe
Q 036723 179 CSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 179 ~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~ 235 (290)
+.-++ +..+..|...+ .+.+|.+... ++.|||.+|..+...++-.
T Consensus 166 i~g~~--------~c~Ge~Kv~rl---~~~~g~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 166 MKKPG--------VLVGDHKRDAV---LKEFGDALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred ecCCC--------CCccHHHHHHH---HHHhCCCCce-EEEECCccHHHHHHhCCcc
Confidence 00000 00122233333 3556654444 8999999999999999965
No 154
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.71 E-value=0.00018 Score=61.56 Aligned_cols=95 Identities=17% Similarity=0.173 Sum_probs=63.9
Q ss_pred CHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHH-H---HHHHHhcCCCCccee-EEeecccCCCC
Q 036723 82 DCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTH-A---ARVLSRLGLEDCFER-IISFETLNSTD 153 (290)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~-~---~~~l~~~gl~~~f~~-i~~~~~~~~~~ 153 (290)
+++++...+.. ....+.||+.++++... ..++.+||...+. . -.-|++.|+...-.. ++--.
T Consensus 108 ~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk------ 177 (274)
T COG2503 108 TPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKK------ 177 (274)
T ss_pred CccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEee------
Confidence 35555555544 33588899999999884 7789999987766 2 233667777654332 21111
Q ss_pred CCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 036723 154 KGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
..|++...++.+.+.+.+ ++.|||++.|.....
T Consensus 178 ----------------------------------------~~k~Ke~R~~~v~k~~~i----Vm~vGDNl~DF~d~~ 210 (274)
T COG2503 178 ----------------------------------------DKKSKEVRRQAVEKDYKI----VMLVGDNLDDFGDNA 210 (274)
T ss_pred ----------------------------------------CCCcHHHHHHHHhhccce----eeEecCchhhhcchh
Confidence 157888888888775555 999999998765443
No 155
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.63 E-value=0.00053 Score=59.21 Aligned_cols=46 Identities=13% Similarity=0.115 Sum_probs=34.0
Q ss_pred CCCCChhHHHHHHcCC---CcEEEEeCCchHH---HHHHHHhcCCCCcceeEE
Q 036723 98 MLKPDPVLRNLLLSLP---IRKVIFTNADKTH---AARVLSRLGLEDCFERII 144 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~---~~~~l~~~gl~~~f~~i~ 144 (290)
..++.|++.++++.++ +.++++|+.+... ...-|...|+..+ +.++
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~Li 169 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLI 169 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-Ceee
Confidence 4578899999998875 7899999988655 4556777787654 4433
No 156
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.63 E-value=0.00016 Score=56.12 Aligned_cols=48 Identities=17% Similarity=0.072 Sum_probs=38.3
Q ss_pred CCCCChhHHHHHHcCCCc---EEEEeCCchHHHHHHHHhcCCCCcceeEEe
Q 036723 98 MLKPDPVLRNLLLSLPIR---KVIFTNADKTHAARVLSRLGLEDCFERIIS 145 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~~~---~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~ 145 (290)
.+.++|.+.+++++++-. +..+|=+....+-..+..+++..+|+.++.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi 89 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI 89 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe
Confidence 467889999999999844 455555667777778999999999998876
No 157
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.61 E-value=0.00022 Score=58.24 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=28.2
Q ss_pred HHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 204 QVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 204 ~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
.+++..++ -++.|||.+||.+|+.+|...|-+.+.
T Consensus 179 ~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 179 QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred HHHHhcCc----eEEecCCchhhhHHHhcCccceeEEec
Confidence 45555665 579999999999999999998876544
No 158
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.60 E-value=2.5e-05 Score=63.63 Aligned_cols=90 Identities=22% Similarity=0.239 Sum_probs=60.9
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCC-CCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGL-EDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl-~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+.+.||+.++|+.+. +.++|+|++...++..+++.+.. ...|+.+++.++....
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~----------------------- 91 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD----------------------- 91 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE-----------------------
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc-----------------------
Confidence 566799999999986 88999999999999999999987 5688888876644321
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
.+.. ..-++.+|.+.+++|+|+|+..-...-...++
T Consensus 92 -------------------~~~~----~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i 127 (159)
T PF03031_consen 92 -------------------KGSY----IKDLSKLGRDLDNVVIVDDSPRKWALQPDNGI 127 (159)
T ss_dssp -------------------TTEE----E--GGGSSS-GGGEEEEES-GGGGTTSGGGEE
T ss_pred -------------------cccc----ccchHHHhhccccEEEEeCCHHHeeccCCceE
Confidence 0000 13355567788999999999864433344444
No 159
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.59 E-value=3.7e-05 Score=66.66 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=54.8
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchH---HHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKT---HAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~---~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
++.|++.++++.++ ..++++|+.+.. ....-|...|...+-..+......... .
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~-~------------------- 174 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK-K------------------- 174 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS---------------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc-c-------------------
Confidence 77788999988774 789999997544 344457777866543334444322110 0
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH-cCCCCCcEEEEcCCccchHHHHhc
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKI-ANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~-~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
. ...=|....+.+.++ +.+ +++|||..+|+..++..
T Consensus 175 ---------------~----~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 175 ---------------S----AVEYKSERRKEIEKKGYRI----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp ------------------------SHHHHHHHHHTTEEE----EEEEESSGGGCHCTHHH
T ss_pred ---------------c----ccccchHHHHHHHHcCCcE----EEEeCCCHHHhhccccc
Confidence 0 001133555555555 444 99999999999995544
No 160
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.56 E-value=0.002 Score=54.80 Aligned_cols=163 Identities=15% Similarity=0.148 Sum_probs=84.2
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCC--cceeEEeecccCCCCCCc--ccccccc-ccCCCCC
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLED--CFERIISFETLNSTDKGT--VLVDQDA-SESERPT 170 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~--~~~~~~~-~~~~~~~ 170 (290)
..++.||+.+.++.|+ ..-+++|..-+.++.+..+..|+.. ....-+..+++.....-- .+.- -. ....+..
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~-~~~~~~~~ge 159 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSI-IDVIASLSGE 159 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHh-cCccccccHH
Confidence 4678899999999997 5678999999999999999888742 111111111111000000 0000 00 0001111
Q ss_pred cc-ccccccCCCCCC---CCCCCCCCCC-CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc---C-CeEEEecC
Q 036723 171 EL-FDIDDYCSRPNA---DLELPRTPVV-CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL---G-LHTVWVGT 241 (290)
Q Consensus 171 ~~-~~~~~~~~~~~~---~~~~~~~~~~-~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a---G-i~~i~v~~ 241 (290)
++ -+....|++... .-++..-..+ +.-+...++..++.-+++-+ +++||||.+|++|.+.+ | +...+.++
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCC
Confidence 11 122233444322 1111111112 23445666676666666655 99999999999998875 3 43334444
Q ss_pred CCCCCCccee--ecCHhHHHHHh
Q 036723 242 SHRAEGVDYA--LESIHNIKEAL 262 (290)
Q Consensus 242 ~~~~~~ad~v--~~sl~el~~~l 262 (290)
-+....||.. -++...+..+|
T Consensus 239 eYal~eAdVAvisp~~~a~~pvi 261 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVI 261 (315)
T ss_pred cccccccceEEeccchhhhhHHH
Confidence 5555555544 34444444433
No 161
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.52 E-value=7.4e-05 Score=63.26 Aligned_cols=43 Identities=21% Similarity=0.123 Sum_probs=40.6
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
+.+|+.+++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 6899999999999999999999999999999999999998754
No 162
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.52 E-value=0.00044 Score=71.63 Aligned_cols=136 Identities=13% Similarity=0.181 Sum_probs=84.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc----eeEEeecccCCCCCCccccccccccCCCCCcc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF----ERIISFETLNSTDKGTVLVDQDASESERPTEL 172 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+..|+...- ...++..++.. -...++
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~---------------~~~~~~ 601 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE---------------MGPAKQ 601 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh---------------CCHHHH
Confidence 56889999998886 889999998888888899999985311 11222221110 000000
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcce
Q 036723 173 FDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDY 250 (290)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~ 250 (290)
... ..+.-+.+...|+-=..+.+.++-..+.+.++||+.||+.|.+.|++. +.++.+.. +..+|+
T Consensus 602 ~~~------------~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVG-ia~g~g~~~ak~aAD~ 668 (917)
T TIGR01116 602 RAA------------CRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIG-IAMGSGTEVAKEASDM 668 (917)
T ss_pred HHh------------hhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCee-EECCCCcHHHHHhcCe
Confidence 000 000011122233333455555555567889999999999999999995 44444433 446899
Q ss_pred eecC--HhHHHHHhH
Q 036723 251 ALES--IHNIKEALP 263 (290)
Q Consensus 251 v~~s--l~el~~~l~ 263 (290)
++.+ +..+.+++.
T Consensus 669 vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 669 VLADDNFATIVAAVE 683 (917)
T ss_pred EEccCCHHHHHHHHH
Confidence 9987 777777653
No 163
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.50 E-value=0.00025 Score=57.31 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=44.5
Q ss_pred HHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCCCCCc---ceeecCHhHHHHHhHHHHH
Q 036723 204 QVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHRAEGV---DYALESIHNIKEALPELWE 267 (290)
Q Consensus 204 ~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~~~~a---d~v~~sl~el~~~l~~~~~ 267 (290)
.+.+.++++- ++.|+. |-.+.|+++|++.+.+++++..-++ -..+....|..+.+.+.++
T Consensus 128 ~~vrth~idl----f~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~k 191 (194)
T COG5663 128 EAVRTHNIDL----FFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRLK 191 (194)
T ss_pred hhhHhhccCc----cccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHhc
Confidence 4567788864 999999 7899999999999999998863332 2335667777777766544
No 164
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.41 E-value=0.00091 Score=67.72 Aligned_cols=106 Identities=19% Similarity=0.218 Sum_probs=73.4
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+.....+..+.+.+|+..++ + ..
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~------~-~~-------------------------- 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA------G-LL-------------------------- 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec------C-CC--------------------------
Confidence 67899999998885 889999999999999999999985221 1 11
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~-- 252 (290)
+.-|+..++. ++ .+..++||||+.||..+++.+++...+ +.+.. ...+|.++
T Consensus 615 ------------------p~~K~~~v~~----l~-~~~~v~mvGDgiNDapAl~~A~vgia~-g~~~~~a~~~adivl~~ 670 (741)
T PRK11033 615 ------------------PEDKVKAVTE----LN-QHAPLAMVGDGINDAPAMKAASIGIAM-GSGTDVALETADAALTH 670 (741)
T ss_pred ------------------HHHHHHHHHH----Hh-cCCCEEEEECCHHhHHHHHhCCeeEEe-cCCCHHHHHhCCEEEec
Confidence 0112344443 33 235799999999999999999975443 44332 33456554
Q ss_pred cCHhHHHHHh
Q 036723 253 ESIHNIKEAL 262 (290)
Q Consensus 253 ~sl~el~~~l 262 (290)
+++.+|.+++
T Consensus 671 ~~l~~l~~~i 680 (741)
T PRK11033 671 NRLRGLAQMI 680 (741)
T ss_pred CCHHHHHHHH
Confidence 5677776544
No 165
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.34 E-value=0.00043 Score=56.39 Aligned_cols=52 Identities=21% Similarity=0.344 Sum_probs=44.6
Q ss_pred CCCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCC-Ccc-eeEEeecc
Q 036723 97 MMLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLE-DCF-ERIISFET 148 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~-~~f-~~i~~~~~ 148 (290)
..+.++||+.++|+.|+ +.++|+|++.+.++..+++.++.. .+| +.+++.++
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~ 110 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDE 110 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEecc
Confidence 34678999999999996 789999999999999999999988 478 66777654
No 166
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.26 E-value=0.0029 Score=51.60 Aligned_cols=39 Identities=8% Similarity=0.062 Sum_probs=27.6
Q ss_pred cHHHHHHHHHHcCCCCCc-EEEEcCCccchHHHHhcCCeE
Q 036723 198 FEEAFEQVFKIANINPRK-TIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e-~i~iGDs~~Di~~a~~aGi~~ 236 (290)
+.+.++.+.+.+.-..-. ++.+||+.+|+++=+++|++.
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 456677777655422222 456899999999999999983
No 167
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.26 E-value=0.012 Score=51.78 Aligned_cols=50 Identities=24% Similarity=0.343 Sum_probs=41.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHH----HHhcCCeEEEecCCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLET----GKRLGLHTVWVGTSHR 244 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~----a~~aGi~~i~v~~~~~ 244 (290)
+-++..++..++.+.|..|+.+|||+|+..++.. .+..|+.+.++.....
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 4567799999999999999999999999976654 3448999888876654
No 168
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=97.20 E-value=0.0015 Score=55.18 Aligned_cols=38 Identities=21% Similarity=0.241 Sum_probs=33.2
Q ss_pred CCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCC
Q 036723 100 KPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLE 137 (290)
Q Consensus 100 ~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~ 137 (290)
...|++.++|+.+. +.++|.|.+...++..++..+++.
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence 44589999999885 889999999999999999998764
No 169
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.17 E-value=0.0022 Score=63.96 Aligned_cols=110 Identities=13% Similarity=0.084 Sum_probs=77.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|+.++|...
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~~--------------------------------- 487 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAEC--------------------------------- 487 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcCC---------------------------------
Confidence 67899999988886 789999999999999999999997543211
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
+ |+-=..+.+.++-..+-+.|+||+.||..+.+.|.+. +.++.+-+ +.-+|.+.-
T Consensus 488 -------------------~--PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLld 545 (673)
T PRK14010 488 -------------------K--PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVG-LAMNSGTMSAKEAANLIDLD 545 (673)
T ss_pred -------------------C--HHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEE-EEeCCCCHHHHHhCCEEEcC
Confidence 1 1222233344443446699999999999999999985 44445543 555777753
Q ss_pred -CHhHHHHHhHH
Q 036723 254 -SIHNIKEALPE 264 (290)
Q Consensus 254 -sl~el~~~l~~ 264 (290)
++..|.+.+..
T Consensus 546 d~ls~Iv~av~~ 557 (673)
T PRK14010 546 SNPTKLMEVVLI 557 (673)
T ss_pred CCHHHHHHHHHH
Confidence 46666655543
No 170
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.10 E-value=0.0025 Score=63.44 Aligned_cols=108 Identities=10% Similarity=0.126 Sum_probs=75.2
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+.....+..+.+.+|+.++|.. ..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~------~~-------------------------- 493 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE------AT-------------------------- 493 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC------CC--------------------------
Confidence 66899999998886 78999999999999999999998653321 11
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
+.-|...++.+.+ ....+.|+||+.||..+.+.+++..+ ++.+.. ...+|++.-
T Consensus 494 ------------------PedK~~~v~~lq~----~g~~VamvGDG~NDapAL~~AdvGiA-m~~gt~~akeaadivLld 550 (675)
T TIGR01497 494 ------------------PEDKIALIRQEQA----EGKLVAMTGDGTNDAPALAQADVGVA-MNSGTQAAKEAANMVDLD 550 (675)
T ss_pred ------------------HHHHHHHHHHHHH----cCCeEEEECCCcchHHHHHhCCEeEE-eCCCCHHHHHhCCEEECC
Confidence 1223345544433 33469999999999999999998644 444443 445677643
Q ss_pred -CHhHHHHHh
Q 036723 254 -SIHNIKEAL 262 (290)
Q Consensus 254 -sl~el~~~l 262 (290)
++..|.+.+
T Consensus 551 d~~s~Iv~av 560 (675)
T TIGR01497 551 SDPTKLIEVV 560 (675)
T ss_pred CCHHHHHHHH
Confidence 355555544
No 171
>PLN02580 trehalose-phosphatase
Probab=97.03 E-value=0.0027 Score=58.98 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=60.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCc---EEEEcCCccchHHHHh-----cCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHH
Q 036723 195 CKPFEEAFEQVFKIANINPRK---TIFFDDSIRNLETGKR-----LGLHTVWVGTSHRAEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e---~i~iGDs~~Di~~a~~-----aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~ 266 (290)
+-.|..+++.+++++|++..+ .++|||..||..|++. .|+ .|.++.+.....|.|.+.+.+|+.++|..+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~ 377 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPKESNAFYSLRDPSEVMEFLKSLV 377 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence 356789999999999998763 3899999999999996 354 5667766666789999999999999998876
Q ss_pred Hhh
Q 036723 267 EVA 269 (290)
Q Consensus 267 ~~~ 269 (290)
+-.
T Consensus 378 ~~~ 380 (384)
T PLN02580 378 TWK 380 (384)
T ss_pred Hhh
Confidence 544
No 172
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.99 E-value=0.0041 Score=62.06 Aligned_cols=109 Identities=14% Similarity=0.174 Sum_probs=75.7
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|++++|...
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~--------------------------------- 491 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEA--------------------------------- 491 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEccC---------------------------------
Confidence 56899999988886 889999999999999999999986533111
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
. |+-=..+.++++-..+-+.|+||+.||..+.+.|.+. +.++.|-+ +.-+|.+.-
T Consensus 492 -------------------~--PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLld 549 (679)
T PRK01122 492 -------------------T--PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAGNMVDLD 549 (679)
T ss_pred -------------------C--HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEEeC
Confidence 1 1222233333433445699999999999999999985 44445543 555777754
Q ss_pred -CHhHHHHHhH
Q 036723 254 -SIHNIKEALP 263 (290)
Q Consensus 254 -sl~el~~~l~ 263 (290)
++..|.+.+.
T Consensus 550 d~~s~Iv~av~ 560 (679)
T PRK01122 550 SNPTKLIEVVE 560 (679)
T ss_pred CCHHHHHHHHH
Confidence 4666655543
No 173
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.97 E-value=0.0032 Score=63.05 Aligned_cols=108 Identities=18% Similarity=0.286 Sum_probs=75.6
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.+.|++.+.++.|+ +++.++|+..+..++.+.+.+|+++++..+...
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellPe------------------------------ 586 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPE------------------------------ 586 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCcH------------------------------
Confidence 56788888887775 789999999999999999999997655333221
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES 254 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s 254 (290)
-|.+.++ +++-....++||||+.||..+...+.+. +.++.|.+ .+-+|.++-+
T Consensus 587 --------------------dK~~~V~----~l~~~g~~VamVGDGINDAPALA~AdVG-iAmG~GtDvA~eaADvvL~~ 641 (713)
T COG2217 587 --------------------DKAEIVR----ELQAEGRKVAMVGDGINDAPALAAADVG-IAMGSGTDVAIEAADVVLMR 641 (713)
T ss_pred --------------------HHHHHHH----HHHhcCCEEEEEeCCchhHHHHhhcCee-EeecCCcHHHHHhCCEEEec
Confidence 1223433 3333336799999999999999999984 55554443 4557766443
Q ss_pred --HhHHHHHh
Q 036723 255 --IHNIKEAL 262 (290)
Q Consensus 255 --l~el~~~l 262 (290)
+..+.+.+
T Consensus 642 ~dL~~v~~ai 651 (713)
T COG2217 642 DDLSAVPEAI 651 (713)
T ss_pred CCHHHHHHHH
Confidence 66665544
No 174
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.93 E-value=0.0083 Score=52.95 Aligned_cols=43 Identities=12% Similarity=0.046 Sum_probs=30.3
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHH---HHHHHhcCCCCc
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHA---ARVLSRLGLEDC 139 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~---~~~l~~~gl~~~ 139 (290)
...++.|++.++++.++ .+++++|+.+.... ..-|...|...+
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~ 190 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW 190 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc
Confidence 34678899999988774 78999999875433 334566676543
No 175
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.66 E-value=0.009 Score=61.66 Aligned_cols=134 Identities=15% Similarity=0.210 Sum_probs=79.9
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+..|+.. +.+++..+.... ...++...
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~---------------~~~el~~~- 576 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEEL---------------SDEELARE- 576 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhC---------------CHHHHHHH-
Confidence 56888888888875 8899999999999999999999963 234443332210 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
..+-.++..-.|+-=..+.+.++-..+.+.|+||+.||..+.+.|++. +.++.+.+ +.-+|.++-
T Consensus 577 -----------~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVG-IAmg~gtdvAk~aADiVLld 644 (867)
T TIGR01524 577 -----------LRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVG-ISVDTAADIAKEASDIILLE 644 (867)
T ss_pred -----------hhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEE-EEeCCccHHHHHhCCEEEec
Confidence 000011122223333333443433446799999999999999999986 44444443 555787763
Q ss_pred -CHhHHHHHhH
Q 036723 254 -SIHNIKEALP 263 (290)
Q Consensus 254 -sl~el~~~l~ 263 (290)
++..+.+++.
T Consensus 645 d~~~~I~~ai~ 655 (867)
T TIGR01524 645 KSLMVLEEGVI 655 (867)
T ss_pred CChHHHHHHHH
Confidence 4555555443
No 176
>PLN02645 phosphoglycolate phosphatase
Probab=96.66 E-value=0.0077 Score=54.66 Aligned_cols=86 Identities=21% Similarity=0.130 Sum_probs=62.9
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCc---hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNAD---KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
++||+.++|+.|+ ++++++||+. .......++.+|+...++.++++.
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~--------------------------- 97 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS--------------------------- 97 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH---------------------------
Confidence 3477777777664 7899999987 333344567788877777777754
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEE
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVW 238 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~ 238 (290)
......++..+....+.++++++..+.+.++.+|+.++.
T Consensus 98 -------------------------~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 98 -------------------------FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred -------------------------HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 455566776666555568888888999999999998654
No 177
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.62 E-value=0.0079 Score=62.29 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=83.5
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|+.. +.+++..++... +..++...
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~---------------~~~el~~~- 611 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAM---------------DDAALARE- 611 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhC---------------CHHHHHHH-
Confidence 56788888888885 8899999999999999999999852 233433332210 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~-- 252 (290)
...-.++..-.|+-=..+.+.++-..+-+.|+||+.||..+.+.|.+. |.++.+.+ +.-+|.++
T Consensus 612 -----------v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLld 679 (903)
T PRK15122 612 -----------VEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVG-ISVDSGADIAKESADIILLE 679 (903)
T ss_pred -----------hhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEE-EEeCcccHHHHHhcCEEEec
Confidence 000011223334444444444444456799999999999999999986 44554443 55688886
Q ss_pred cCHhHHHHHhHH
Q 036723 253 ESIHNIKEALPE 264 (290)
Q Consensus 253 ~sl~el~~~l~~ 264 (290)
+++..+.+++.+
T Consensus 680 d~f~~Iv~ai~~ 691 (903)
T PRK15122 680 KSLMVLEEGVIK 691 (903)
T ss_pred CChHHHHHHHHH
Confidence 446666655543
No 178
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.60 E-value=0.0093 Score=61.74 Aligned_cols=134 Identities=18% Similarity=0.223 Sum_probs=82.5
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|+.. +.+++..++... +..++...
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l---------------~~~el~~~- 611 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL---------------SDDELANL- 611 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC---------------CHHHHHHH-
Confidence 56788888888775 8899999999999999999999952 344444433210 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeec-
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALE- 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~- 253 (290)
+.+-.++..-.|+-=..+.+.++-...-+.|+||+.||..+.+.|.+. |.++.+.+ +.-+|.++-
T Consensus 612 -----------~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLld 679 (902)
T PRK10517 612 -----------AERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIG-ISVDGAVDIAREAADIILLE 679 (902)
T ss_pred -----------HhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEE-EEeCCcCHHHHHhCCEEEec
Confidence 000011223333433444444444456799999999999999999985 44445433 556788764
Q ss_pred -CHhHHHHHhH
Q 036723 254 -SIHNIKEALP 263 (290)
Q Consensus 254 -sl~el~~~l~ 263 (290)
++..+.+.+.
T Consensus 680 d~~~~I~~ai~ 690 (902)
T PRK10517 680 KSLMVLEEGVI 690 (902)
T ss_pred CChHHHHHHHH
Confidence 4666655543
No 179
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.57 E-value=0.0084 Score=50.94 Aligned_cols=37 Identities=8% Similarity=-0.022 Sum_probs=23.9
Q ss_pred HHHHHHHHHcCC-CCC-cEEEEcCCccchHHHHhcCCeE
Q 036723 200 EAFEQVFKIANI-NPR-KTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 200 ~~~~~il~~~~~-~~~-e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
++...+++.+.. ... -++.+|||.||+.+.......+
T Consensus 194 ~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~Af 232 (274)
T COG3769 194 QAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAF 232 (274)
T ss_pred HHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhhe
Confidence 444444443322 222 5999999999999997766543
No 180
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.53 E-value=0.028 Score=49.61 Aligned_cols=100 Identities=17% Similarity=0.201 Sum_probs=62.2
Q ss_pred CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCC-CCCccccccccccCCCCCccccccccCCCCCCCCCCCCC
Q 036723 113 PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNST-DKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRT 191 (290)
Q Consensus 113 ~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (290)
+..+++=|-|.++++...++.+++..+||.+++....... ......+..++..+....=.+|....-. +||
T Consensus 158 g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~-------LPK- 229 (297)
T PF05152_consen 158 GCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNN-------LPK- 229 (297)
T ss_pred CCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCC-------CCC-
Confidence 3567888999999999999999999999999886653321 1111122233333333333344332111 222
Q ss_pred CCCCCCcHHHHHHHHHHcCCCC-CcEEEEcCCc-cch
Q 036723 192 PVVCKPFEEAFEQVFKIANINP-RKTIFFDDSI-RNL 226 (290)
Q Consensus 192 ~~~~Kp~~~~~~~il~~~~~~~-~e~i~iGDs~-~Di 226 (290)
.|......+++.|+.- +-+-.|+|-. ||+
T Consensus 230 ------SPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 230 ------SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred ------CCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 1678888899999975 3455666666 554
No 181
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=96.46 E-value=0.11 Score=48.03 Aligned_cols=125 Identities=15% Similarity=0.083 Sum_probs=78.5
Q ss_pred HHHHHHcCCCcEEEEeCCchHHHHHHHHhc---CCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCC
Q 036723 105 LRNLLLSLPIRKVIFTNADKTHAARVLSRL---GLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSR 181 (290)
Q Consensus 105 ~~~~L~~L~~~~~ivT~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (290)
....++..+.++.+.||.+-.+....+.+. +...+|+.++..-.-.. |..++ .-+++-...-+.
T Consensus 206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~------------ff~e~-~vlreV~t~~g~ 272 (424)
T KOG2469|consen 206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPG------------FFHEG-TVLREVEPQEGL 272 (424)
T ss_pred chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCc------------ccccc-ceeeeecccccc
Confidence 555555666788999998877777666544 45567887665431110 11111 111111111223
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchH-HHHhcCCeEEEecCC
Q 036723 182 PNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLE-TGKRLGLHTVWVGTS 242 (290)
Q Consensus 182 ~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~-~a~~aGi~~i~v~~~ 242 (290)
+-..+-+.+....+++.+...+.++..++....+++++||+. .|+- .-+.-|+.++.+...
T Consensus 273 l~~g~~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 273 LKNGDNTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred ccccccCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence 333344444455677888888999999999889999999999 4754 456689998888554
No 182
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.44 E-value=0.0061 Score=63.46 Aligned_cols=135 Identities=11% Similarity=0.026 Sum_probs=82.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+....-+..+.+..|+...-..+++..++... ..+....+++-.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l------------~~~el~~~i~~~ 646 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRL------------VYEEMDPILPKL 646 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhC------------CHHHHHHHhccC
Confidence 56788888888875 889999999999999999999986432334444433210 000000011101
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEec-CCC--CCCCcceeec
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVG-TSH--RAEGVDYALE 253 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~-~~~--~~~~ad~v~~ 253 (290)
..+ +.-.|+-=..+.+.++-..+.+.|+||+.||..+.+.|.+..+ ++ .+. ...-+|+++.
T Consensus 647 ~Vf---------------ar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIA-mg~~gtdvAk~aADivL~ 710 (941)
T TIGR01517 647 RVL---------------ARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFS-MGISGTEVAKEASDIILL 710 (941)
T ss_pred eEE---------------EECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCccee-cCCCccHHHHHhCCEEEe
Confidence 111 1222232223333333334569999999999999999998644 33 333 2556788877
Q ss_pred --CHhHHHHHh
Q 036723 254 --SIHNIKEAL 262 (290)
Q Consensus 254 --sl~el~~~l 262 (290)
++..+..++
T Consensus 711 dd~f~~I~~~i 721 (941)
T TIGR01517 711 DDNFASIVRAV 721 (941)
T ss_pred cCCHHHHHHHH
Confidence 677777666
No 183
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.43 E-value=0.014 Score=59.29 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=80.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ +++.++|+....-+..+.+.+|+.. .+++.+++..+.. ....+.+...+.+.-.
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~ 512 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT---NIYTADVLLKGDN------RDDLPSGELGEMVEDA 512 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC---CCcCHHHhcCCcc------hhhCCHHHHHHHHHhC
Confidence 66889998888875 8899999999999999999999864 1222222211000 0000000000000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcceeecC
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYALES 254 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v~~s 254 (290)
. ++..-.|+-=..+.+.++-..+-+.|+||+.||..+.+.|.+. |.++.+.+ +.-+|.++-+
T Consensus 513 ~---------------vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 513 D---------------GFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGATDAARSAADIVLTE 576 (755)
T ss_pred C---------------EEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCcHHHHHhCCEEEEc
Confidence 0 1122233333344444444556799999999999999999986 44444443 4557777543
Q ss_pred --HhHHHHHhH
Q 036723 255 --IHNIKEALP 263 (290)
Q Consensus 255 --l~el~~~l~ 263 (290)
+..+.+++.
T Consensus 577 d~l~~I~~ai~ 587 (755)
T TIGR01647 577 PGLSVIVDAIL 587 (755)
T ss_pred CChHHHHHHHH
Confidence 555555443
No 184
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.36 E-value=0.0082 Score=63.10 Aligned_cols=137 Identities=10% Similarity=0.063 Sum_probs=81.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc----------eeEEeecccCCCCCCccccccccccC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF----------ERIISFETLNSTDKGTVLVDQDASES 166 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f----------~~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (290)
++.|++.+.++.++ ++++++|+....-+..+.+..|+.... ..+++..++...
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l-------------- 711 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL-------------- 711 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhc--------------
Confidence 56788888888875 889999999999999999999985321 123333322210
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC--C
Q 036723 167 ERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH--R 244 (290)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~--~ 244 (290)
...++-.... .-.+...-.|+-=..+.+.++-..+.+.|+||+.||..+.+.|++...+-..+. .
T Consensus 712 -~~~~l~~~~~------------~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~va 778 (1053)
T TIGR01523 712 -SDEEVDDLKA------------LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVA 778 (1053)
T ss_pred -CHHHHHHHhh------------cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHH
Confidence 0000000000 000112222333333334333334669999999999999999998644321333 2
Q ss_pred CCCcceeecC--HhHHHHHhH
Q 036723 245 AEGVDYALES--IHNIKEALP 263 (290)
Q Consensus 245 ~~~ad~v~~s--l~el~~~l~ 263 (290)
+.-+|+++.+ +..+.+++.
T Consensus 779 k~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 779 KDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred HHhcCEEEecCCHHHHHHHHH
Confidence 5568888755 777776653
No 185
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.04 E-value=0.016 Score=59.42 Aligned_cols=71 Identities=11% Similarity=0.109 Sum_probs=57.8
Q ss_pred CCCcHHHHHHHHH---HcCCCCCcEEEEcCCccchHHHHhcCC-------------eEEEecCCCCCCCcceeecCHhHH
Q 036723 195 CKPFEEAFEQVFK---IANINPRKTIFFDDSIRNLETGKRLGL-------------HTVWVGTSHRAEGVDYALESIHNI 258 (290)
Q Consensus 195 ~Kp~~~~~~~il~---~~~~~~~e~i~iGDs~~Di~~a~~aGi-------------~~i~v~~~~~~~~ad~v~~sl~el 258 (290)
+..|..+++.+++ .+|++++++++|||+.||..|++.++- -+|-|+ .....|.|.+++.+|+
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--~~~S~A~y~L~d~~eV 837 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--QKPSKAKYYLDDTAEI 837 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--CCCccCeEecCCHHHH
Confidence 5677889999875 468999999999999999999998862 344554 3457789999999999
Q ss_pred HHHhHHHHH
Q 036723 259 KEALPELWE 267 (290)
Q Consensus 259 ~~~l~~~~~ 267 (290)
.++|..+-.
T Consensus 838 ~~lL~~L~~ 846 (854)
T PLN02205 838 VRLMQGLAS 846 (854)
T ss_pred HHHHHHHHh
Confidence 999988664
No 186
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.88 E-value=0.015 Score=60.29 Aligned_cols=137 Identities=16% Similarity=0.149 Sum_probs=82.6
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcc--eeEEeecccCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCF--ERIISFETLNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
-+|.|++.+.++.|+ ++++++|+....-+..+.+..|+...- +.++...++... ...++.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l---------------~~~el~ 610 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDAL---------------SDEELA 610 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhc---------------CHHHHH
Confidence 377888888888875 899999999999999999999976543 235555544321 111222
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCccee
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVDYA 251 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad~v 251 (290)
+....++ +...-.|+-=..+.+.++-...-+.|.||+.||+.|.+.|.+...+...|-+ ++-+|.+
T Consensus 611 ~~~~~~~------------VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadiv 678 (917)
T COG0474 611 ELVEELS------------VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIV 678 (917)
T ss_pred HHhhhCc------------EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceE
Confidence 2111111 1122223332333333333346699999999999999999997655554433 4446555
Q ss_pred ecC--HhHHHHHh
Q 036723 252 LES--IHNIKEAL 262 (290)
Q Consensus 252 ~~s--l~el~~~l 262 (290)
..+ +.-+..++
T Consensus 679 l~dd~~~~i~~av 691 (917)
T COG0474 679 LLDDNFATIVLAV 691 (917)
T ss_pred eecCcHHHHHHHH
Confidence 433 44444444
No 187
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=95.74 E-value=0.41 Score=45.92 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=26.4
Q ss_pred hhHHHHHHcCCCcEEEEeCCchHHHHHHHHh-cCCC
Q 036723 103 PVLRNLLLSLPIRKVIFTNADKTHAARVLSR-LGLE 137 (290)
Q Consensus 103 pg~~~~L~~L~~~~~ivT~~~~~~~~~~l~~-~gl~ 137 (290)
+...+....-+ +.+++|..++.+++..++. +|.+
T Consensus 99 ~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 99 MEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 44555555544 8999999999999999988 7754
No 188
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.63 E-value=0.048 Score=51.12 Aligned_cols=114 Identities=18% Similarity=0.189 Sum_probs=81.8
Q ss_pred HHHHHHHHhhcCCCCCCC--CChhHHHHHHcCC---CcEEEEeCC--chHHHHHHHHhcCCCCcceeEEeecccCCCCCC
Q 036723 83 CDDFHSYVHGRLPYMMLK--PDPVLRNLLLSLP---IRKVIFTNA--DKTHAARVLSRLGLEDCFERIISFETLNSTDKG 155 (290)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~--~~pg~~~~L~~L~---~~~~ivT~~--~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 155 (290)
+..+.+...-.+..+... |.....++.+.+. .+++++|+. +.+..+..+...|.+..--.++.+.+..-
T Consensus 80 p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl---- 155 (635)
T COG5610 80 PLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL---- 155 (635)
T ss_pred cHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh----
Confidence 444444443344444433 3334556666553 788899886 67777888888886633333565555443
Q ss_pred ccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCC
Q 036723 156 TVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGL 234 (290)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi 234 (290)
.|.....|.++++.-++++.+.+++||+. .|+.++++.|+
T Consensus 156 ---------------------------------------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI 196 (635)
T COG5610 156 ---------------------------------------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGI 196 (635)
T ss_pred ---------------------------------------hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccch
Confidence 58889999999999999999999999999 69999999999
Q ss_pred eEEEe
Q 036723 235 HTVWV 239 (290)
Q Consensus 235 ~~i~v 239 (290)
.|.+.
T Consensus 197 ~Tlf~ 201 (635)
T COG5610 197 STLFY 201 (635)
T ss_pred hHHHH
Confidence 88755
No 189
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.51 E-value=0.059 Score=56.60 Aligned_cols=140 Identities=11% Similarity=0.093 Sum_probs=78.8
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcce------------------------eEEeecccCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFE------------------------RIISFETLNST 152 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~------------------------~i~~~~~~~~~ 152 (290)
++.|++.+.++.++ ++++++|+.....+..+.+.+|+...-. .++++.++..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~- 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD- 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-
Confidence 56788888888875 7899999999999999999998842110 0111111110
Q ss_pred CCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc
Q 036723 153 DKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL 232 (290)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a 232 (290)
-...++-.....+ ...+...-.|+-=..+.+.++-...-|.++||+.||+.|.+.|
T Consensus 647 --------------l~~~el~~~~~~~----------~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~A 702 (997)
T TIGR01106 647 --------------MTSEQLDEILKYH----------TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKA 702 (997)
T ss_pred --------------CCHHHHHHHHHhc----------CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhC
Confidence 0000111000000 0001122223333333333333335699999999999999999
Q ss_pred CCeEEEecCCC--CCCCcceeecC--HhHHHHHhHH
Q 036723 233 GLHTVWVGTSH--RAEGVDYALES--IHNIKEALPE 264 (290)
Q Consensus 233 Gi~~i~v~~~~--~~~~ad~v~~s--l~el~~~l~~ 264 (290)
.+..++-..|. .+.-+|+++.+ +.-+.+++.+
T Consensus 703 dVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~ 738 (997)
T TIGR01106 703 DIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEE 738 (997)
T ss_pred CcceecCCcccHHHHHhhceEEecCCHHHHHHHHHH
Confidence 98644322333 25567888776 7777665433
No 190
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=95.48 E-value=0.051 Score=49.27 Aligned_cols=122 Identities=18% Similarity=0.270 Sum_probs=71.0
Q ss_pred ChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhc-C--CCCcceeEE-eecccCCCCCCccccccccccCCC-CCccc
Q 036723 102 DPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRL-G--LEDCFERII-SFETLNSTDKGTVLVDQDASESER-PTELF 173 (290)
Q Consensus 102 ~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~-g--l~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 173 (290)
.|....+|..|+ .+++++||.+..++..-+..+ | ..+.||.++ ..+... + |..+. +...+
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~--------F----ftde~rPfR~~ 309 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPE--------F----FTDERRPFRKY 309 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCc--------c----cccccCcchhh
Confidence 456667777774 779999999999998776665 3 335788754 333211 1 11111 22222
Q ss_pred ccc-ccCCCCCCCCCCCCCCCCCCCc-HHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-hcCCeEEEec
Q 036723 174 DID-DYCSRPNADLELPRTPVVCKPF-EEAFEQVFKIANINPRKTIFFDDSI-RNLETGK-RLGLHTVWVG 240 (290)
Q Consensus 174 ~~~-~~~~~~~~~~~~~~~~~~~Kp~-~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~-~aGi~~i~v~ 240 (290)
|-. +++. =...+-+-+ +|-- -..+...++..|+...++++|||++ +|+.... ..||.+-++-
T Consensus 310 dek~~sl~-wdkv~klek----gkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 310 DEKRGSLL-WDKVDKLEK----GKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred cccccchh-hhhhhhccc----CceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 211 0000 000000111 1111 2245677888899999999999999 8988776 8999987763
No 191
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.31 E-value=0.072 Score=53.88 Aligned_cols=108 Identities=17% Similarity=0.240 Sum_probs=69.6
Q ss_pred CCChhHHHHHHcC---CCcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSL---PIRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L---~~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
.+.|++...++.| +++++++|+.+...+..+.+..| ++.+++.- .
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev--~-------------------------- 770 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV--L-------------------------- 770 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc--C--------------------------
Confidence 4456666655544 58999999999999999999999 45555421 0
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC--CCCCcceee--
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH--RAEGVDYAL-- 252 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~--~~~~ad~v~-- 252 (290)
+-.|.+.++.+.+ ....++||||+.||-.+.-.|.+. +.++.+. .-+-+|.++
T Consensus 771 ------------------P~~K~~~Ik~lq~----~~~~VaMVGDGINDaPALA~AdVG-Iaig~gs~vAieaADIVLmr 827 (951)
T KOG0207|consen 771 ------------------PEQKAEKIKEIQK----NGGPVAMVGDGINDAPALAQADVG-IAIGAGSDVAIEAADIVLMR 827 (951)
T ss_pred ------------------chhhHHHHHHHHh----cCCcEEEEeCCCCccHHHHhhccc-eeeccccHHHHhhCCEEEEc
Confidence 1222345555444 335699999999999988888775 3333333 344466663
Q ss_pred cCHhHHHHHh
Q 036723 253 ESIHNIKEAL 262 (290)
Q Consensus 253 ~sl~el~~~l 262 (290)
+++.++...+
T Consensus 828 n~L~~v~~ai 837 (951)
T KOG0207|consen 828 NDLRDVPFAI 837 (951)
T ss_pred cchhhhHHHH
Confidence 4455554443
No 192
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=95.29 E-value=0.077 Score=45.91 Aligned_cols=45 Identities=7% Similarity=-0.023 Sum_probs=40.5
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
|.+.|+.+.+++|-+.-..++|||+..--.+|+..+++++-+...
T Consensus 215 K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h 259 (274)
T TIGR01658 215 KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLH 259 (274)
T ss_pred hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecC
Confidence 369999999999997889999999999999999999999888653
No 193
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.16 E-value=0.036 Score=55.52 Aligned_cols=143 Identities=15% Similarity=0.124 Sum_probs=84.0
Q ss_pred CCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCccee----EEeecccCCCCCCccccccccccCCCCCc
Q 036723 99 LKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFER----IISFETLNSTDKGTVLVDQDASESERPTE 171 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (290)
-+|.|++.+.++.++ +++..+|+....-+..+..+.|+...-+. .++..+ |+...+++
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~e---------------fD~ls~~~ 647 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSE---------------FDDLSDEE 647 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhh---------------hhcCCHHH
Confidence 378888888888775 89999999999999999999997543332 222221 22222222
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC--CCCcc
Q 036723 172 LFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR--AEGVD 249 (290)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~--~~~ad 249 (290)
+-+.+. ...++..-.|+-=..+.+.++-..+=+.|-||+.||..+.|.|.+..++--.|-+ +..+|
T Consensus 648 ~~~~~~------------~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 648 LDDAVR------------RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred HHHHhh------------cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 222111 1111111222333333444444446699999999999999999986443324433 56678
Q ss_pred eeecCHhHHHHHhHHHHHhh
Q 036723 250 YALESIHNIKEALPELWEVA 269 (290)
Q Consensus 250 ~v~~sl~el~~~l~~~~~~~ 269 (290)
.|+.+ +++..++.-+-|++
T Consensus 716 MVL~D-DnFstIvaAVEEGr 734 (972)
T KOG0202|consen 716 MVLAD-DNFSTIVAAVEEGR 734 (972)
T ss_pred cEEec-CcHHHHHHHHHHhH
Confidence 77665 44444444444444
No 194
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.11 E-value=0.06 Score=40.37 Aligned_cols=48 Identities=27% Similarity=0.269 Sum_probs=33.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCch---HHHHHHHHhcCCCCcceeEEeec
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADK---THAARVLSRLGLEDCFERIISFE 147 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~---~~~~~~l~~~gl~~~f~~i~~~~ 147 (290)
.+.||+.++++.|+ .+++++||+.. ......++.+|+.-..+.++++.
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~ 67 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG 67 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH
Confidence 46788888888885 78999999853 34455668889886667777764
No 195
>PLN03017 trehalose-phosphatase
Probab=95.10 E-value=0.14 Score=47.30 Aligned_cols=75 Identities=15% Similarity=0.130 Sum_probs=58.9
Q ss_pred CCCcHHHHHHHHHHcCCCC---CcEEEEcCCccchHHHHhcC----CeEEEecCCCCCCCcceeecCHhHHHHHhHHHHH
Q 036723 195 CKPFEEAFEQVFKIANINP---RKTIFFDDSIRNLETGKRLG----LHTVWVGTSHRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~---~e~i~iGDs~~Di~~a~~aG----i~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
+-.|..+++.+++.++... .-.+|+||..+|-.+++.+. -..|.|+.......|.|.+.+.+|+.++|..|.+
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 3466899999999998753 35899999999999998762 2356676534457789999999999999988865
Q ss_pred hh
Q 036723 268 VA 269 (290)
Q Consensus 268 ~~ 269 (290)
-.
T Consensus 361 ~~ 362 (366)
T PLN03017 361 WK 362 (366)
T ss_pred HH
Confidence 44
No 196
>PLN02151 trehalose-phosphatase
Probab=95.08 E-value=0.1 Score=48.00 Aligned_cols=73 Identities=21% Similarity=0.219 Sum_probs=57.4
Q ss_pred CCcHHHHHHHHHHcCCCCC---cEEEEcCCccchHHHHhc-----CCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHH
Q 036723 196 KPFEEAFEQVFKIANINPR---KTIFFDDSIRNLETGKRL-----GLHTVWVGTSHRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~---e~i~iGDs~~Di~~a~~a-----Gi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
-.|..+++.+++.++.... -.+|+||-.+|-.+++.+ |+ .|.|+.+.....|.|.+++.+++.++|..+.+
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 4578999999999886533 389999999999998865 33 45666544567799999999999999988765
Q ss_pred hh
Q 036723 268 VA 269 (290)
Q Consensus 268 ~~ 269 (290)
-.
T Consensus 347 ~~ 348 (354)
T PLN02151 347 WK 348 (354)
T ss_pred hh
Confidence 44
No 197
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.05 E-value=0.15 Score=44.48 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=35.0
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCC
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLE 137 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~ 137 (290)
+..+.+.+.+.+ ..+.+.+|+.++++.|. +++.|+|.|-...++.++...+..
T Consensus 75 l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~ 130 (246)
T PF05822_consen 75 LTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF 130 (246)
T ss_dssp -BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--
T ss_pred cCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC
Confidence 345555555544 45778889999988774 889999999999999999988654
No 198
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.28 E-value=0.14 Score=54.28 Aligned_cols=63 Identities=11% Similarity=0.141 Sum_probs=45.2
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC---CCCCcceeecCHhHHHHHh
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH---RAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~---~~~~ad~v~~sl~el~~~l 262 (290)
+-|.++++.+.+.. ..-++++||+.||+.|.+.|.+.. ++...+ ....+|+++.++..|..++
T Consensus 754 ~qK~~IV~~lk~~~---~~~vl~iGDG~ND~~mlk~AdVGI-gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 754 SQKADVVRLVKKST---GKTTLAIGDGANDVSMIQEADVGV-GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred HHHHHHHHHHHhcC---CCeEEEEeCCCccHHHHhhcCeee-EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 55556665554432 356999999999999999999854 543333 3445899999888888766
No 199
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=93.94 E-value=0.083 Score=41.36 Aligned_cols=15 Identities=40% Similarity=0.494 Sum_probs=13.1
Q ss_pred cEEEEecCCCcccCC
Q 036723 16 DCLLFDLDDTIYPLT 30 (290)
Q Consensus 16 k~viFDlDGTL~d~~ 30 (290)
|+|+||+||||++..
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 799999999999743
No 200
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.92 E-value=0.27 Score=47.57 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=64.3
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
++.|++.+.++.|+ ++++++|+........+-+.+|+ + ....
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~--~~~~-------------------------- 391 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F--ARVT-------------------------- 391 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e--eccC--------------------------
Confidence 56788888887775 77999999999999988888886 1 1111
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecC
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALES 254 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~s 254 (290)
|+--..+.+++.-....+.++||+.||..+.+.+++. ++++ ....+|.++.+
T Consensus 392 ----------------------p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advg-ia~~---a~~~adivl~~ 443 (499)
T TIGR01494 392 ----------------------PEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVG-IAMG---AKAAADIVLLD 443 (499)
T ss_pred ----------------------HHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCc-cccc---hHHhCCeEEec
Confidence 1222233333333336799999999999999999875 3333 33447777665
No 201
>PLN03190 aminophospholipid translocase; Provisional
Probab=93.65 E-value=0.06 Score=57.26 Aligned_cols=63 Identities=10% Similarity=0.046 Sum_probs=45.3
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC---CCCCcceeecCHhHHHHHh
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH---RAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~---~~~~ad~v~~sl~el~~~l 262 (290)
+-|.++.+.+.+.. ..-++++||+.||+.|.+.|.+.. ++...+ +..-+|+.+..+..|..+|
T Consensus 857 ~QKa~IV~~vk~~~---~~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 857 LQKAGIVALVKNRT---SDMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred HHHHHHHHHHHhcC---CcEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHH
Confidence 55556666554433 245999999999999999998753 554433 2445899999998888766
No 202
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=93.43 E-value=0.52 Score=49.96 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=32.9
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCC
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLED 138 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~ 138 (290)
++.|++.+.++.|+ ++++++|+....-+..+.+..|+..
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~ 697 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVN 697 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 56788888888775 8899999999988888999999854
No 203
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.35 E-value=0.074 Score=42.65 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=31.2
Q ss_pred CCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCC
Q 036723 211 INPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHR 244 (290)
Q Consensus 211 ~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~ 244 (290)
..++|+++|||++ +||.+|+..|--.+|...+-.
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 6899999999999 899999999999999987764
No 204
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.26 E-value=0.35 Score=39.25 Aligned_cols=21 Identities=14% Similarity=0.105 Sum_probs=19.2
Q ss_pred cEEEEcCCccchHHHHhcCCe
Q 036723 215 KTIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 215 e~i~iGDs~~Di~~a~~aGi~ 235 (290)
=...+|.+.+|+.+=+++|++
T Consensus 121 f~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 121 FYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred EEEecCCcHHHHHHHHHcCCC
Confidence 377899999999999999998
No 205
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=93.10 E-value=0.94 Score=40.21 Aligned_cols=51 Identities=20% Similarity=0.115 Sum_probs=38.2
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHH---HHHHHHh-cCCCCcceeEEeec
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTH---AARVLSR-LGLEDCFERIISFE 147 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~---~~~~l~~-~gl~~~f~~i~~~~ 147 (290)
..-.++||+.++|+.|+ .+.+++||+++.. ....++. +++....+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 45578999999999886 7899999985443 3445555 66667788888876
No 206
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.09 E-value=1 Score=42.86 Aligned_cols=39 Identities=26% Similarity=0.257 Sum_probs=35.6
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCC
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi 234 (290)
-|+.+-++.+++++|+..+-.+|++|++...+.-+.-+-
T Consensus 310 ~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 310 DPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred CcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 788899999999999999999999999988888888774
No 207
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=92.13 E-value=0.1 Score=39.06 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=21.2
Q ss_pred EEEecCCCcccCCCChHHHHHHHHHHHHHHHcCCCcc
Q 036723 18 LLFDLDDTIYPLTSGLSKEVTKNIQEYMLQKLCIEEA 54 (290)
Q Consensus 18 viFDlDGTL~d~~~~~~~~~~~~i~~~~~~~~g~~~~ 54 (290)
++||+||||+++...+.. ..++++. +...|.+..
T Consensus 1 ~l~D~dGvl~~g~~~ipg-a~e~l~~--L~~~g~~~~ 34 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPG-AVEALDA--LRERGKPVV 34 (101)
T ss_dssp EEEESTTTSEETTEE-TT-HHHHHHH--HHHTTSEEE
T ss_pred CEEeCccEeEeCCCcCcC-HHHHHHH--HHHcCCCEE
Confidence 689999999996555444 3445555 444455443
No 208
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=92.12 E-value=0.63 Score=41.41 Aligned_cols=83 Identities=17% Similarity=0.192 Sum_probs=53.1
Q ss_pred ChhHHHHHHcCC---CcEEEEeCCc---hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccc
Q 036723 102 DPVLRNLLLSLP---IRKVIFTNAD---KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDI 175 (290)
Q Consensus 102 ~pg~~~~L~~L~---~~~~ivT~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (290)
+||+.++|+.|+ .+++++||+. +......+.++|+....+.++++.
T Consensus 20 ~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~---------------------------- 71 (279)
T TIGR01452 20 VPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA---------------------------- 71 (279)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH----------------------------
Confidence 456667776664 7789999864 333345678888865556666654
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE
Q 036723 176 DDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV 237 (290)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i 237 (290)
......+++.+....+++++|+. ...+.++..|+..+
T Consensus 72 ------------------------~~~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 72 ------------------------LCAARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred ------------------------HHHHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 44445555544445679999986 33455667787644
No 209
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.10 E-value=0.12 Score=43.49 Aligned_cols=27 Identities=33% Similarity=0.509 Sum_probs=21.5
Q ss_pred EEEEecCCCcccCC-CChHHHHHHHHHH
Q 036723 17 CLLFDLDDTIYPLT-SGLSKEVTKNIQE 43 (290)
Q Consensus 17 ~viFDlDGTL~d~~-~~~~~~~~~~i~~ 43 (290)
+|+||+||||++.. ..+.....+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 48999999999865 5677777777777
No 210
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=89.02 E-value=0.97 Score=43.42 Aligned_cols=86 Identities=16% Similarity=0.233 Sum_probs=64.2
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDID 176 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (290)
...||+.|-+.+|+ ++++.+|+.++.-...+.+..|++++.. +
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA-----e----------------------------- 492 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA-----E----------------------------- 492 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh-----c-----------------------------
Confidence 45689999888776 8999999999988898999999876541 1
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe
Q 036723 177 DYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
.+| +-=..+.++.+...+=+.|.||+-||..+.-.+....++.
T Consensus 493 ------------------atP--EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 493 ------------------ATP--EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred ------------------CCh--HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 244 2223445555556677999999999999999988754443
No 211
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=88.04 E-value=1.4 Score=40.54 Aligned_cols=43 Identities=14% Similarity=0.172 Sum_probs=37.1
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~ 241 (290)
|...|+.|.+++|- .-..++|||+.-.-.+|++..|++.-+..
T Consensus 410 KescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 410 KESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeecc
Confidence 35899999999997 56788999999889999999999876644
No 212
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.60 E-value=1.1 Score=39.19 Aligned_cols=51 Identities=14% Similarity=0.096 Sum_probs=33.4
Q ss_pred CCHHHHHHHHhhcCCCCCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcC
Q 036723 81 FDCDDFHSYVHGRLPYMMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLG 135 (290)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~g 135 (290)
++...+.+.+.+ ..+.+..|..++++.|. +++.++|.+....++.++....
T Consensus 123 f~k~~I~~~Va~----s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~ 176 (298)
T KOG3128|consen 123 FSKNAIDDIVAE----SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKL 176 (298)
T ss_pred cCHHHHHHHHHH----hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHh
Confidence 344555555443 33445567777766664 8999999998888887765543
No 213
>PLN02580 trehalose-phosphatase
Probab=84.82 E-value=2.1 Score=40.06 Aligned_cols=34 Identities=6% Similarity=0.157 Sum_probs=25.3
Q ss_pred CCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHh
Q 036723 100 KPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSR 133 (290)
Q Consensus 100 ~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~ 133 (290)
.+.|++.+.|+.|. .+++|||+.+...+...+.-
T Consensus 141 ~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 141 LMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred cCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 44467777777774 57999999998888776643
No 214
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=83.44 E-value=0.47 Score=32.05 Aligned_cols=25 Identities=24% Similarity=0.413 Sum_probs=16.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 036723 202 FEQVFKIANINPRKTIFFDDSIRNLETGK 230 (290)
Q Consensus 202 ~~~il~~~~~~~~e~i~iGDs~~Di~~a~ 230 (290)
++++++++|+ +|++||..+|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 5788999999 999999999999875
No 215
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=81.61 E-value=1.5 Score=38.15 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=19.7
Q ss_pred ccEEEEecCCCcccCCC-----ChHHHHHHHHHH
Q 036723 15 YDCLLFDLDDTIYPLTS-----GLSKEVTKNIQE 43 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~-----~~~~~~~~~i~~ 43 (290)
..+++||+||||++... .......+.+++
T Consensus 3 ~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~ 36 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQK 36 (244)
T ss_pred cEEEEEecCccccCCcCCCcccCCCHHHHHHHHH
Confidence 56899999999997422 234555555555
No 216
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=79.05 E-value=9.5 Score=33.26 Aligned_cols=45 Identities=18% Similarity=0.312 Sum_probs=32.0
Q ss_pred hhHHHHHHcCC---CcEEEEeC---CchHHHHHHHHhcCCCCcceeEEeec
Q 036723 103 PVLRNLLLSLP---IRKVIFTN---ADKTHAARVLSRLGLEDCFERIISFE 147 (290)
Q Consensus 103 pg~~~~L~~L~---~~~~ivT~---~~~~~~~~~l~~~gl~~~f~~i~~~~ 147 (290)
|++.++|+.|+ .+++++|| .........++.+|+....+.++++-
T Consensus 20 ~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~ 70 (249)
T TIGR01457 20 PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS 70 (249)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence 45566665554 78899998 34666677788889887677777764
No 217
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=78.95 E-value=8.1 Score=33.99 Aligned_cols=40 Identities=25% Similarity=0.195 Sum_probs=28.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
|-+|..+ ++.++- =|||+|....++.|. .+++++.|..+.
T Consensus 222 G~~K~~v----L~~~~p----hIFFDDQ~~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 222 GLPKGPV----LKAFRP----HIFFDDQDGHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred CCchhHH----HHhhCC----CEeecCchhhhhHhh-cCCCEEeccCCc
Confidence 3454444 444443 469999999999998 888888887664
No 218
>PLN03017 trehalose-phosphatase
Probab=78.68 E-value=1.9 Score=39.96 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=21.6
Q ss_pred CccEEEEecCCCcc---c-CCC-ChHHHHHHHHHH
Q 036723 14 KYDCLLFDLDDTIY---P-LTS-GLSKEVTKNIQE 43 (290)
Q Consensus 14 ~~k~viFDlDGTL~---d-~~~-~~~~~~~~~i~~ 43 (290)
+.-+|++|+||||+ + ... .+.....+++++
T Consensus 110 k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~ 144 (366)
T PLN03017 110 KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKK 144 (366)
T ss_pred CCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHH
Confidence 35688899999999 3 233 466777777777
No 219
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=77.11 E-value=2.5 Score=36.43 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=32.1
Q ss_pred CCCcHHHHHHHHHHcCCC---CCcEEEEcCCccchHHHHhcCCe-----EEEecCCC---CCCCcceeecC
Q 036723 195 CKPFEEAFEQVFKIANIN---PRKTIFFDDSIRNLETGKRLGLH-----TVWVGTSH---RAEGVDYALES 254 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~---~~e~i~iGDs~~Di~~a~~aGi~-----~i~v~~~~---~~~~ad~v~~s 254 (290)
+..|..+++.++++++.. +.-++++||..+|-.+++.+.-. .+.++... ....|.|.+++
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 455789999999999875 67899999999999999986543 55665543 34556666655
No 220
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=76.77 E-value=49 Score=28.99 Aligned_cols=60 Identities=18% Similarity=0.287 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc-----cchHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhH
Q 036723 200 EAFEQVFKIANINPRKTIFFDDSI-----RNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALP 263 (290)
Q Consensus 200 ~~~~~il~~~~~~~~e~i~iGDs~-----~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~ 263 (290)
+.=..++++++++ +++-=||= .=+++|+.+|++.+.+.++... .+..++++++++.+++.
T Consensus 184 e~n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 184 ELNRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEP-YGDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-CCCcccCCHHHHHHHHh
Confidence 4446778889985 45444432 3489999999999999998753 23444789999988764
No 221
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=76.75 E-value=11 Score=38.73 Aligned_cols=83 Identities=10% Similarity=0.018 Sum_probs=60.2
Q ss_pred CCCcHHHHHHHHHHc------CCCCCcEEEEcCCc-cchHHHHhcCCeE------------------------------E
Q 036723 195 CKPFEEAFEQVFKIA------NINPRKTIFFDDSI-RNLETGKRLGLHT------------------------------V 237 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~------~~~~~e~i~iGDs~-~Di~~a~~aGi~~------------------------------i 237 (290)
+..|..+++.+++++ +.+++=++++||.. .|=.|++..+-.. +
T Consensus 676 gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (797)
T PLN03063 676 GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYF 755 (797)
T ss_pred CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceE
Confidence 457789999999976 33567799999986 4888888765211 2
Q ss_pred EecCCCCCCCcceeecCHhHHHHHhHHHHHhhCCCCCccc
Q 036723 238 WVGTSHRAEGVDYALESIHNIKEALPELWEVAGENSESIS 277 (290)
Q Consensus 238 ~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~~~~~~~~~~ 277 (290)
.+.-|.....|.|.+++..|+.++|..+-.....-..|++
T Consensus 756 ~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~~~~~~~ 795 (797)
T PLN03063 756 SCAIGQARTKARYVLDSSNDVVSLLHKLAVANTTMTDSFS 795 (797)
T ss_pred EEEECCCCccCeecCCCHHHHHHHHHHHhccCcccccccC
Confidence 2223445688999999999999999998877655555443
No 222
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=74.87 E-value=2.6 Score=42.03 Aligned_cols=63 Identities=6% Similarity=0.116 Sum_probs=43.8
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC---CCCCCCcceeecCHhHHHHHh
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT---SHRAEGVDYALESIHNIKEAL 262 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~---~~~~~~ad~v~~sl~el~~~l 262 (290)
-.|+++.+.+.++-| ..+.+|||+-||+-|.+.|... |++.. .++.-.||+-++.+..+.++|
T Consensus 767 tQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVG-IGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred hHHHHHHHHHHHhhC---ceEEEEcCCCccchheeecccc-eeeecccccccchhccccHHHHHHHHHHh
Confidence 445667666666656 6689999999999999887653 44432 223345889888888777755
No 223
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=73.50 E-value=3.6 Score=42.67 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=20.8
Q ss_pred CccEEEEecCCCcccCCC---ChHHHHHHHHHH
Q 036723 14 KYDCLLFDLDDTIYPLTS---GLSKEVTKNIQE 43 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~---~~~~~~~~~i~~ 43 (290)
+.++|++|+||||++... ...+.+.+.+++
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~ 627 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNT 627 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHH
Confidence 478999999999997442 333455555555
No 224
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=71.15 E-value=2.7 Score=44.55 Aligned_cols=57 Identities=12% Similarity=0.043 Sum_probs=37.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCC---CCCcceeecCH
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHR---AEGVDYALESI 255 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~---~~~ad~v~~sl 255 (290)
++-|+.+.+.+.+..+ ..+++|||+.||+.|.+.|.+. |++...+. ..-+|+.+.-+
T Consensus 779 PlQKA~Vv~lVk~~~~---~~TLAIGDGANDVsMIQ~AhVG-VGIsG~EGmQAvmsSD~AIaqF 838 (1151)
T KOG0206|consen 779 PLQKALVVKLVKKGLK---AVTLAIGDGANDVSMIQEAHVG-VGISGQEGMQAVMSSDFAIAQF 838 (1151)
T ss_pred HHHHHHHHHHHHhcCC---ceEEEeeCCCccchheeeCCcC-eeeccchhhhhhhcccchHHHH
Confidence 3566777777744444 4599999999999999988863 55544332 23355544443
No 225
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=70.83 E-value=2.1 Score=34.03 Aligned_cols=103 Identities=18% Similarity=0.162 Sum_probs=62.0
Q ss_pred CCCCCChhHHHHHHcCC--CcEEEEeCC--chHHHHHH----HHhcCCCCcceeEEeecccCCCCCCccccccccccCCC
Q 036723 97 MMLKPDPVLRNLLLSLP--IRKVIFTNA--DKTHAARV----LSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESER 168 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~--~~~~ivT~~--~~~~~~~~----l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (290)
..+.+.|++.+.++.|- +.++|+|.. .....+.. .+.+.+-.+-..++|.. -+.
T Consensus 65 RnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn-Kni----------------- 126 (180)
T COG4502 65 RNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN-KNI----------------- 126 (180)
T ss_pred hhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC-CCe-----------------
Confidence 45678899999999995 778888876 33333333 34445444434455543 110
Q ss_pred CCccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCc
Q 036723 169 PTELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGV 248 (290)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~a 248 (290)
+. -=++|+|++..++.++... |+....+.....
T Consensus 127 ------------------------------------------vk--aDilIDDnp~nLE~F~G~k---IlFdA~HN~nen 159 (180)
T COG4502 127 ------------------------------------------VK--ADILIDDNPLNLENFKGNK---ILFDAHHNKNEN 159 (180)
T ss_pred ------------------------------------------EE--eeEEecCCchhhhhccCce---EEEecccccCcc
Confidence 01 1358999999999886443 444444443333
Q ss_pred c-eeecCHhHHHHHhHH
Q 036723 249 D-YALESIHNIKEALPE 264 (290)
Q Consensus 249 d-~v~~sl~el~~~l~~ 264 (290)
. ..+.++.|+.+.|-+
T Consensus 160 RF~Rv~~W~e~eq~ll~ 176 (180)
T COG4502 160 RFVRVRDWYEAEQALLE 176 (180)
T ss_pred ceeeeccHHHHHHHHHH
Confidence 3 337788888866543
No 226
>PLN02151 trehalose-phosphatase
Probab=70.38 E-value=3.9 Score=37.82 Aligned_cols=30 Identities=20% Similarity=0.300 Sum_probs=20.8
Q ss_pred CccEEEEecCCCcc----cCCC-ChHHHHHHHHHH
Q 036723 14 KYDCLLFDLDDTIY----PLTS-GLSKEVTKNIQE 43 (290)
Q Consensus 14 ~~k~viFDlDGTL~----d~~~-~~~~~~~~~i~~ 43 (290)
+.-++++|+||||+ +... .......++++.
T Consensus 97 ~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~ 131 (354)
T PLN02151 97 KQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRK 131 (354)
T ss_pred CceEEEEecCccCCCCCCCcccccCCHHHHHHHHH
Confidence 34689999999999 3233 345666666666
No 227
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=70.18 E-value=4.4 Score=34.25 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=24.1
Q ss_pred ccEEEEecCCCcccCCCChHHHHHHHHHH
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKEVTKNIQE 43 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~~~~~i~~ 43 (290)
--+++||+||||........+.+.+.+++
T Consensus 11 ~~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred ceEEEEecCCccccccccCCHHHHHHHHH
Confidence 34899999999999888888888776666
No 228
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=69.07 E-value=7.6 Score=35.22 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=35.3
Q ss_pred CCCCcHHHHHHHHH-------HcC-C-CCCcEEEEcCCc-cchHHHH---------------hcCCeEEEecCC
Q 036723 194 VCKPFEEAFEQVFK-------IAN-I-NPRKTIFFDDSI-RNLETGK---------------RLGLHTVWVGTS 242 (290)
Q Consensus 194 ~~Kp~~~~~~~il~-------~~~-~-~~~e~i~iGDs~-~Di~~a~---------------~aGi~~i~v~~~ 242 (290)
+|||.+-.|+.+.. ..+ . +.++.-+|||++ +|+..|+ +-|+.+|.+.+|
T Consensus 269 ~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 269 LGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred cCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 47888666554433 222 2 568899999999 8999997 677888888554
No 229
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=67.58 E-value=40 Score=28.92 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=65.6
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchHH---HHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCcccc
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKTH---AARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
..||+.+.|++|+ .++-.+||..... ....|.++|+.-.-+-|+++-
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl--------------------------- 76 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSL--------------------------- 76 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCcc---------------------------
Confidence 5688889988887 4567888875544 444566667653222233321
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHhcCCeEEEecCCCCCCCcceeec
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSI-RNLETGKRLGLHTVWVGTSHRAEGVDYALE 253 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~-~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~ 253 (290)
.+..+.+++-++.| .++|.|.. .|........-.++-++-.... +
T Consensus 77 -------------------------~aa~~~~~~~~lrP--~l~v~d~a~~dF~gidTs~pn~VViglape~----F--- 122 (262)
T KOG3040|consen 77 -------------------------PAARQYLEENQLRP--YLIVDDDALEDFDGIDTSDPNCVVIGLAPEG----F--- 122 (262)
T ss_pred -------------------------HHHHHHHHhcCCCc--eEEEcccchhhCCCccCCCCCeEEEecCccc----c---
Confidence 34566788888877 88888887 6777766665445555432211 1
Q ss_pred CHhHHHHHhHHHHHh
Q 036723 254 SIHNIKEALPELWEV 268 (290)
Q Consensus 254 sl~el~~~l~~~~~~ 268 (290)
+.+.|-++++-|++.
T Consensus 123 ~y~~ln~AFrvL~e~ 137 (262)
T KOG3040|consen 123 SYQRLNRAFRVLLEM 137 (262)
T ss_pred cHHHHHHHHHHHHcC
Confidence 455666666655554
No 230
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=66.83 E-value=3 Score=39.32 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=21.5
Q ss_pred HHHcCCCCCc-EEEEcCCccchHHHHhcCCe
Q 036723 206 FKIANINPRK-TIFFDDSIRNLETGKRLGLH 235 (290)
Q Consensus 206 l~~~~~~~~e-~i~iGDs~~Di~~a~~aGi~ 235 (290)
++.+.+.... +.-||...+|+..-+++|++
T Consensus 486 l~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 486 LKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHhhCcCChhhccccccchhheeeccccCC
Confidence 3344444443 44789999999999999987
No 231
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ....
Probab=65.60 E-value=34 Score=28.85 Aligned_cols=68 Identities=21% Similarity=0.115 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEe-cCCCCCCCcceeecCHhHHHHHhHHHHH
Q 036723 200 EAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWV-GTSHRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 200 ~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v-~~~~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
..-+.+++++|++-.+...+.|-..-.+-.+..+.+.+.+ ..+-...+.-.+..+.+|..+.+.+++.
T Consensus 4 ~faK~fm~~~~IPTa~~~~f~~~~~A~~~l~~~~~p~~ViKadGla~GKGV~i~~~~~eA~~~l~~~~~ 72 (194)
T PF01071_consen 4 SFAKEFMKRYGIPTAKYKVFTDYEEALEYLEEQGYPYVVIKADGLAAGKGVVIADDREEALEALREIFV 72 (194)
T ss_dssp HHHHHHHHHTT-SB--EEEESSHHHHHHHHHHHSSSEEEEEESSSCTTTSEEEESSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCeeEECCHHHHHHHHHhcCCCceEEccCCCCCCCEEEEeCCHHHHHHHHHHhcc
Confidence 4567899999999888888887555556667788777334 3444444556778999999999999997
No 232
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=64.72 E-value=15 Score=32.27 Aligned_cols=47 Identities=19% Similarity=0.246 Sum_probs=33.2
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchH---HHHHHHHhcCCCCcceeEEeec
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKT---HAARVLSRLGLEDCFERIISFE 147 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~---~~~~~l~~~gl~~~f~~i~~~~ 147 (290)
+.|++.++++.|+ ++++++||.... .....+..+|+.--.+.++++.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHH
Confidence 4567777777765 789999986444 4566677888875566777764
No 233
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=64.57 E-value=8.1 Score=40.38 Aligned_cols=37 Identities=16% Similarity=0.321 Sum_probs=28.3
Q ss_pred CCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhcCC
Q 036723 100 KPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRLGL 136 (290)
Q Consensus 100 ~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~gl 136 (290)
.+.|++.++|+.|. ..++|+|+.+...++..+...++
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L 662 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM 662 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc
Confidence 45677888887773 56899999999998888766543
No 234
>PRK10444 UMP phosphatase; Provisional
Probab=64.14 E-value=21 Score=31.23 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=30.9
Q ss_pred CChhHHHHHHcCC---CcEEEEeCCchHH---HHHHHHhcCCCCcceeEEeec
Q 036723 101 PDPVLRNLLLSLP---IRKVIFTNADKTH---AARVLSRLGLEDCFERIISFE 147 (290)
Q Consensus 101 ~~pg~~~~L~~L~---~~~~ivT~~~~~~---~~~~l~~~gl~~~f~~i~~~~ 147 (290)
+.|++.++++.|+ .+.+++||..... ....+..+|+.-..+.++++.
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~ 70 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSA 70 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHH
Confidence 3467777777664 7799999986543 344456677754456666654
No 235
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.59 E-value=5.5 Score=27.05 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=23.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccchHHHHh
Q 036723 202 FEQVFKIANINPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 202 ~~~il~~~~~~~~e~i~iGDs~~Di~~a~~ 231 (290)
++++++.+|+ ++++||..-||++.+.
T Consensus 7 VqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 7 VQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 5789999999 9999999999999764
No 236
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=62.93 E-value=24 Score=32.11 Aligned_cols=81 Identities=16% Similarity=0.099 Sum_probs=51.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCcc-chHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHhhCCCCCccccc
Q 036723 201 AFEQVFKIANINPRKTIFFDDSIR-NLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEVAGENSESISYS 279 (290)
Q Consensus 201 ~~~~il~~~~~~~~e~i~iGDs~~-Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~~~~~~~~~~~~ 279 (290)
+-+.+.+++|++.+...| -|+.. =..++.+.|++++--.--...-+...++++.+++.++...--+..+ -.+
T Consensus 117 iRrlAAeeLglpTs~Y~f-a~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqsvv~~~e~ve~AW~~A~~g~R------~~~ 189 (394)
T COG0027 117 IRRLAAEELGLPTSKYRF-ADSLEELRAAVEKIGFPCVVKPVMSSSGKGQSVVRSPEDVEKAWEYAQQGGR------GGS 189 (394)
T ss_pred HHHHHHHHhCCCCccccc-cccHHHHHHHHHHcCCCeecccccccCCCCceeecCHHHHHHHHHHHHhcCC------CCC
Confidence 444666789998887755 56664 4667788999876322111223456788898888775444333332 457
Q ss_pred ceeeeeeec
Q 036723 280 GKVSIETSV 288 (290)
Q Consensus 280 ~~~~~~~~~ 288 (290)
++|.||--|
T Consensus 190 ~RVIVE~fv 198 (394)
T COG0027 190 GRVIVEEFV 198 (394)
T ss_pred CcEEEEEEe
Confidence 788888543
No 237
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=62.73 E-value=35 Score=29.33 Aligned_cols=49 Identities=31% Similarity=0.299 Sum_probs=34.2
Q ss_pred CCCChhHHHHHHcC---CCcEEEEeCCc---hHHHHHHHHh-cCCCCcceeEEeec
Q 036723 99 LKPDPVLRNLLLSL---PIRKVIFTNAD---KTHAARVLSR-LGLEDCFERIISFE 147 (290)
Q Consensus 99 ~~~~pg~~~~L~~L---~~~~~ivT~~~---~~~~~~~l~~-~gl~~~f~~i~~~~ 147 (290)
-.++|++.+.++.+ ++++.++||.. .......+.. +|+.-.++.++++.
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~ 68 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG 68 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH
Confidence 35678999999888 47899999764 3333344555 78776677777764
No 238
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=61.79 E-value=5.6 Score=32.32 Aligned_cols=15 Identities=40% Similarity=0.609 Sum_probs=13.1
Q ss_pred cEEEEecCCCcccCC
Q 036723 16 DCLLFDLDDTIYPLT 30 (290)
Q Consensus 16 k~viFDlDGTL~d~~ 30 (290)
+++++|+|+||+.+.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 589999999999854
No 239
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=60.52 E-value=6.5 Score=31.81 Aligned_cols=18 Identities=39% Similarity=0.421 Sum_probs=15.1
Q ss_pred CccEEEEecCCCcccCCC
Q 036723 14 KYDCLLFDLDDTIYPLTS 31 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~~ 31 (290)
+..++++|+|.||+.+..
T Consensus 5 ~kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTK 22 (156)
T ss_pred CceEEEEeCCCCcccccc
Confidence 467999999999998554
No 240
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=57.48 E-value=6.3 Score=34.94 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=47.0
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcC---CeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHhh
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLG---LHTVWVGTSHRAEGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aG---i~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
.-|..++..++++...+..-+++.||..+|-.++..+. -.++-++.+. ..+++...........+..+.+..
T Consensus 181 ~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~--t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 181 VSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGS--TQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred cchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCc--ccccccccccHHHHHHHHHHHHHh
Confidence 44678999999998887777999999999999998877 4455555443 333333333333344444444333
No 241
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=55.77 E-value=14 Score=31.81 Aligned_cols=31 Identities=16% Similarity=0.294 Sum_probs=15.9
Q ss_pred EEecCCCcccCCC-----ChHHHHHHHHHHHHHHHcC
Q 036723 19 LFDLDDTIYPLTS-----GLSKEVTKNIQEYMLQKLC 50 (290)
Q Consensus 19 iFDlDGTL~d~~~-----~~~~~~~~~i~~~~~~~~g 50 (290)
+||+||||.+... .....+...+++ ++....
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~-La~~~~ 36 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRA-LAADPN 36 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHH-HHHHSE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHH-HhccCC
Confidence 6999999997544 334555566666 444433
No 242
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=54.64 E-value=22 Score=35.40 Aligned_cols=51 Identities=22% Similarity=0.363 Sum_probs=42.7
Q ss_pred CCCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCC-Ccc-eeEEeecc
Q 036723 98 MLKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLE-DCF-ERIISFET 148 (290)
Q Consensus 98 ~~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~-~~f-~~i~~~~~ 148 (290)
.+++.|++.++|+.+. +.+.|+|-+.+.++..+.+.+.-. .+| ++|++-++
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 4678999999999997 779999999999999999888654 455 56888765
No 243
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=51.03 E-value=24 Score=31.03 Aligned_cols=62 Identities=11% Similarity=0.254 Sum_probs=45.5
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCC------ccchHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHH
Q 036723 200 EAFEQVFKIANINPRKTIFFDDS------IRNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 200 ~~~~~il~~~~~~~~e~i~iGDs------~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~ 265 (290)
+.=..++++++++ +++-=|| ..=+++|+.+|++.+.+.++.. ..+..++.+++++.+++.++
T Consensus 187 e~n~al~~~~~i~---~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~el~~~l~~~ 254 (256)
T TIGR00715 187 ELEKALLREYRID---AVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-IPGVAIFDDISQLNQFVARL 254 (256)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-CCCCccCCCHHHHHHHHHHh
Confidence 3445778888885 4554444 3458999999999999999864 33346778999999888764
No 244
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=50.37 E-value=24 Score=37.40 Aligned_cols=46 Identities=22% Similarity=0.176 Sum_probs=36.5
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcE-EEEcCCcc-chHHHHhcCCe
Q 036723 185 DLELPRTPVVCKPFEEAFEQVFKIANINPRKT-IFFDDSIR-NLETGKRLGLH 235 (290)
Q Consensus 185 ~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~-i~iGDs~~-Di~~a~~aGi~ 235 (290)
.+++|. +.-+.++++++..++|++.+++ +++|||-| |++.. -.|..
T Consensus 948 LDVlP~----~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~ 995 (1050)
T TIGR02468 948 LNVIPL----LASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLH 995 (1050)
T ss_pred eeeeeC----CCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCce
Confidence 445555 5778999999999999999999 55999998 98866 33444
No 245
>PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis. This family does not contain all known ATP-grasp domain members. All the enzymes of this family possess ATP-dependent carboxylate-amine ligase activity, and their catalytic mechanisms are likely to include acylphosphate intermediates.; PDB: 3K5H_C 3K5I_C 3AX6_A 3Q2O_B 3QFF_B 3R5H_A 3ORQ_B 3ORR_B 4E4T_B 2Z04_A ....
Probab=49.79 E-value=47 Score=27.35 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=38.7
Q ss_pred HHHcCCCCCcEEEEcCCccchHH-HHhcCCeEEEec-CCCCCCCcceeecCHhHHHHHhHHH
Q 036723 206 FKIANINPRKTIFFDDSIRNLET-GKRLGLHTVWVG-TSHRAEGVDYALESIHNIKEALPEL 265 (290)
Q Consensus 206 l~~~~~~~~e~i~iGDs~~Di~~-a~~aGi~~i~v~-~~~~~~~ad~v~~sl~el~~~l~~~ 265 (290)
|+++|++-.....+.+. .|+.. +...|.+++.=. .+.-..+..+++++-+|+.+++..+
T Consensus 1 l~~~gip~~~~~~i~~~-~~l~~a~~~iG~P~vlK~~~~GYDGkGq~~i~~~~dl~~a~~~~ 61 (172)
T PF02222_consen 1 LDELGIPTAPYATIDSL-EDLEEAAESIGFPAVLKTRRGGYDGKGQFVIRSEEDLEKAWQEL 61 (172)
T ss_dssp HHHTT--B-EEEEESSH-HHHHHHHHHHTSSEEEEESSSSCTTTTEEEESSGGGHHHHHHHT
T ss_pred CcccCCCCCCeEEECCH-HHHHHHHHHcCCCEEEEccCcCcCCCccEEECCHHHHHHHHHhc
Confidence 56788877777666544 56644 466899988663 3333455678899999998877765
No 246
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=49.56 E-value=18 Score=33.73 Aligned_cols=44 Identities=16% Similarity=0.351 Sum_probs=33.3
Q ss_pred cHHHHHHHHHHc----CCCCCcEEEEcCCc-----cchHHHHhcCCeEEEecCCC
Q 036723 198 FEEAFEQVFKIA----NINPRKTIFFDDSI-----RNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 198 ~~~~~~~il~~~----~~~~~e~i~iGDs~-----~Di~~a~~aGi~~i~v~~~~ 243 (290)
|..+++.+.+-+ ++.+++|++|||-- ||.+ |+.++ .++|+.++.
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~-~t~WIasP~ 402 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLAC-TTAWIASPQ 402 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhc-eeeEecCHH
Confidence 347778877777 89999999999953 6665 45566 488997765
No 247
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=48.23 E-value=10 Score=34.39 Aligned_cols=22 Identities=14% Similarity=0.218 Sum_probs=17.3
Q ss_pred ccEEEEecCCCcccCCCChHHH
Q 036723 15 YDCLLFDLDDTIYPLTSGLSKE 36 (290)
Q Consensus 15 ~k~viFDlDGTL~d~~~~~~~~ 36 (290)
-=+++||+||+|+.+...+..+
T Consensus 35 ~fgfafDIDGVL~RG~~~i~~~ 56 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFRGHRPIPGA 56 (389)
T ss_pred ceeEEEecccEEEecCCCCcch
Confidence 3489999999999977666543
No 248
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=47.27 E-value=46 Score=34.38 Aligned_cols=31 Identities=10% Similarity=0.117 Sum_probs=26.1
Q ss_pred CCcEEEEcCCccchHHHHhcCCeEEEecCCC
Q 036723 213 PRKTIFFDDSIRNLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 213 ~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~ 243 (290)
..-++|-||+-||+-+.++|....+..+++.
T Consensus 806 Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 806 GYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred CeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 3469999999999999999998877776654
No 249
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=46.46 E-value=2e+02 Score=25.15 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=35.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCc--cchHHHHhcCCeEEEecC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSI--RNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~--~Di~~a~~aGi~~i~v~~ 241 (290)
.-|-|..-+.+++..|++ |+.|||.+ .+....+..|+..|.+..
T Consensus 72 a~PGP~~ARE~l~~~~iP---~IvI~D~p~~K~~d~l~~~g~GYIivk~ 117 (277)
T PRK00994 72 AAPGPKKAREILKAAGIP---CIVIGDAPGKKVKDAMEEQGLGYIIVKA 117 (277)
T ss_pred CCCCchHHHHHHHhcCCC---EEEEcCCCccchHHHHHhcCCcEEEEec
Confidence 466678888999988984 99999999 477888999998777644
No 250
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=45.59 E-value=93 Score=27.61 Aligned_cols=31 Identities=16% Similarity=0.258 Sum_probs=20.4
Q ss_pred CCccEEEEecCCCcccCCC-----ChHHHHHHHHHH
Q 036723 13 QKYDCLLFDLDDTIYPLTS-----GLSKEVTKNIQE 43 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~-----~~~~~~~~~i~~ 43 (290)
.+.++++||+||||.+... .....+.+.+++
T Consensus 16 a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~ 51 (266)
T COG1877 16 ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQD 51 (266)
T ss_pred ccceEEEEeccccccccccCccccCCCHHHHHHHHH
Confidence 4578999999999996322 223444455555
No 251
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=43.38 E-value=44 Score=29.27 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc-----cchHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHH
Q 036723 200 EAFEQVFKIANINPRKTIFFDDSI-----RNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELW 266 (290)
Q Consensus 200 ~~~~~il~~~~~~~~e~i~iGDs~-----~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~ 266 (290)
+.=..++++++++ +++-=||= .=+++|+.+|++.+.+.++... ....++.+++|+.+++.+.+
T Consensus 180 e~n~aL~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-~~~~~~~~~~e~~~~l~~~~ 247 (248)
T PRK08057 180 ELERALLRQHRID---VVVTKNSGGAGTEAKLEAARELGIPVVMIARPALP-YADREFEDVAELVAWLRHLL 247 (248)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-CCCcccCCHHHHHHHHHHhh
Confidence 4445778889985 44433332 3489999999999999998642 22356789999999887653
No 252
>COG1872 Uncharacterized conserved protein [Function unknown]
Probab=42.13 E-value=36 Score=25.50 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=27.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 036723 188 LPRTPVVCKPFEEAFEQVFKIANINPRKTIFF 219 (290)
Q Consensus 188 ~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~i 219 (290)
..+||+-||-+.+.+..+.+.++++.+++..+
T Consensus 42 i~apP~~GKAN~~li~~Lak~~~v~kS~V~iv 73 (102)
T COG1872 42 ITAPPVDGKANEELIKFLAKTFGVPKSSVEIV 73 (102)
T ss_pred EecCCCCcchhHHHHHHHHHHhCCCcccEEEE
Confidence 45678889999999999999999998877655
No 253
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=41.45 E-value=1.4e+02 Score=27.69 Aligned_cols=70 Identities=11% Similarity=0.002 Sum_probs=47.4
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHH
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
+....+.+++++|++--....+.|...-.+.+...|.+.+.=..+......-.++.+.+|+.+.+.+++.
T Consensus 67 dK~~~k~~l~~~gIptp~~~~~~~~~ea~~~~~~~g~PvVvKp~~~~~gkGV~iv~~~~el~~a~~~~~~ 136 (379)
T PRK13790 67 SKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYG 136 (379)
T ss_pred CHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh
Confidence 3456678899999987667666553333344567788766444333333455678999999999998874
No 254
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A.
Probab=40.96 E-value=1.8e+02 Score=23.04 Aligned_cols=70 Identities=20% Similarity=0.241 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccchHH-HHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHhh
Q 036723 199 EEAFEQVFKIANINPRKTIFFDDSIRNLET-GKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEVA 269 (290)
Q Consensus 199 ~~~~~~il~~~~~~~~e~i~iGDs~~Di~~-a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~~ 269 (290)
...+..+++++|++--+.+.+.+. .++.. +...|.+.+.=.........-+++.+.+++.+.+..+.+..
T Consensus 5 K~~~~~~~~~~gv~~P~~~~~~~~-~~~~~~~~~~~~p~vvKp~~g~gs~gv~~~~~~~~l~~~~~~~~~~~ 75 (184)
T PF13535_consen 5 KYRMRELLKKAGVPVPKTRIVDSE-EELRAFAEDLGFPFVVKPVDGSGSRGVFIVHSPEELEAALAEIREDS 75 (184)
T ss_dssp HHHHHHHHHHHTS----EEEECSH-HHHHHHHHHSSSSEEEEESS-STTTT-EEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCEEEECCH-HHHHHHHHHcCCCEEEEcCccccCCCEEEeCCHHHHHHHHHHHHHhc
Confidence 467788899999975556666654 55554 46677765544333333456677899999999999987776
No 255
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=40.25 E-value=54 Score=22.95 Aligned_cols=46 Identities=9% Similarity=0.197 Sum_probs=36.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~ 242 (290)
..|....++.+++++++++.....|-+.--.|..++.+|- ++...|
T Consensus 25 ~aPftAvlkfaAEeFkv~~~TsAiiTndGvGINP~qtAGn--vflkhg 70 (82)
T cd01766 25 STPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGN--VFLKHG 70 (82)
T ss_pred cCchHHHHHHHHHhcCCCccceeEEecCccccChhhcccc--eeeecC
Confidence 4677899999999999999888888777788889999984 444333
No 256
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=40.04 E-value=96 Score=32.23 Aligned_cols=138 Identities=10% Similarity=0.068 Sum_probs=76.0
Q ss_pred CCChhHHHHHHcCC---CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeec--ccCCCCCCccccccccccCCCCCcccc
Q 036723 100 KPDPVLRNLLLSLP---IRKVIFTNADKTHAARVLSRLGLEDCFERIISFE--TLNSTDKGTVLVDQDASESERPTELFD 174 (290)
Q Consensus 100 ~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (290)
+..||+.+.++.++ +.+-.+|+.+-.-++.+...-|+...=+.....+ +++. ..-+......+
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~------------~s~ee~~~i~p 714 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE------------LSQEERDKIWP 714 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh------------cCHHHHHhhhh
Confidence 55889999988775 7788999888877777777777654322212211 1110 00011111222
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE-EecCCC-CCCCcceee
Q 036723 175 IDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV-WVGTSH-RAEGVDYAL 252 (290)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i-~v~~~~-~~~~ad~v~ 252 (290)
--..+.++-++ +...+-..+++.| +=+.+-||+-||..+.+.|.+... ++...+ +++..|.++
T Consensus 715 kl~VlARSSP~------------DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 715 KLRVLARSSPN------------DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIII 779 (1034)
T ss_pred hheeeecCCCc------------hHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEE
Confidence 22222222211 1223333333322 346677999999999999998844 443333 366678776
Q ss_pred cC--HhHHHHHhHH
Q 036723 253 ES--IHNIKEALPE 264 (290)
Q Consensus 253 ~s--l~el~~~l~~ 264 (290)
-+ +..+..++.+
T Consensus 780 ~DDNFssIVk~v~W 793 (1034)
T KOG0204|consen 780 LDDNFSSIVKAVKW 793 (1034)
T ss_pred EcCchHHHHHHHHh
Confidence 54 6666665543
No 257
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=38.61 E-value=20 Score=31.74 Aligned_cols=97 Identities=15% Similarity=0.258 Sum_probs=66.0
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCC-CCcceeEEeecc--cCCCCCCccccccccccCCCCCccc
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGL-EDCFERIISFET--LNSTDKGTVLVDQDASESERPTELF 173 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl-~~~f~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (290)
+...|++.++|.++. +.++++|.+...+...++..++- ...+...+.-+. ...+
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g--------------------- 188 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDG--------------------- 188 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECC---------------------
Confidence 455799999999986 77899999999999999999875 334443332221 1110
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEE-EecCCC
Q 036723 174 DIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTV-WVGTSH 243 (290)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i-~v~~~~ 243 (290)
.|-.=+...|.+.++++.|+|++.-..+--..|++.- |+....
T Consensus 189 ---------------------------~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~ 232 (262)
T KOG1605|consen 189 ---------------------------NYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPT 232 (262)
T ss_pred ---------------------------cEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCC
Confidence 0001124556688999999999988888888888743 554433
No 258
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=38.52 E-value=1e+02 Score=28.70 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=35.7
Q ss_pred CCCChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcce
Q 036723 99 LKPDPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFE 141 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~ 141 (290)
....||+.-+|..+. +.++++|+.....+..+++.++-..++.
T Consensus 213 f~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lDP~g~Is 257 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALDPKGYIS 257 (393)
T ss_pred eccCchHHHHHHhhcccceEEEEecCCccchhhhHhhcCCcceEE
Confidence 456899999999997 7799999999888888999987665554
No 259
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=36.85 E-value=22 Score=33.19 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=16.0
Q ss_pred CCccEEEEecCCCcccCCC
Q 036723 13 QKYDCLLFDLDDTIYPLTS 31 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d~~~ 31 (290)
..-|.+.||+||||+++..
T Consensus 73 ~~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CCcceEEEecCCceeecCC
Confidence 3468999999999998665
No 260
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=35.51 E-value=42 Score=23.68 Aligned_cols=32 Identities=13% Similarity=0.080 Sum_probs=25.5
Q ss_pred CCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 036723 188 LPRTPVVCKPFEEAFEQVFKIANINPRKTIFF 219 (290)
Q Consensus 188 ~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~i 219 (290)
+.+||+.||-+.+.++.+.+.|+++.+++-.+
T Consensus 32 v~app~~GkAN~ali~~La~~l~v~ks~i~i~ 63 (77)
T PF02594_consen 32 VTAPPVDGKANKALIRFLAKALGVPKSDIEIV 63 (77)
T ss_dssp BSTTCCCCCHHHHHHHHHHHHCT--TTCEEEC
T ss_pred EecCCCcChhHHHHHHHHHHHhCCCcccEEEE
Confidence 56678889999999999999999998876543
No 261
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=35.06 E-value=13 Score=32.81 Aligned_cols=17 Identities=29% Similarity=0.462 Sum_probs=13.5
Q ss_pred CccEEEEecCCCcccCC
Q 036723 14 KYDCLLFDLDDTIYPLT 30 (290)
Q Consensus 14 ~~k~viFDlDGTL~d~~ 30 (290)
+.|++++|+|+||+.+.
T Consensus 88 ~kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 88 GRKTLVLDLDETLVHSS 104 (262)
T ss_pred CCceEEEeCCCcccccc
Confidence 46899999999988744
No 262
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=33.41 E-value=51 Score=26.80 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=26.6
Q ss_pred CCccEEEEecCCCccc-CCCChHHHHHHHHHHHHHHHcC
Q 036723 13 QKYDCLLFDLDDTIYP-LTSGLSKEVTKNIQEYMLQKLC 50 (290)
Q Consensus 13 ~~~k~viFDlDGTL~d-~~~~~~~~~~~~i~~~~~~~~g 50 (290)
..+|+|+||-|++|.- .+..+|+...+.++. +...+|
T Consensus 41 ~~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~-~~~vyg 78 (190)
T KOG2961|consen 41 KGIKAVVLDKDNCITAPYSLAIWPPLLPSIER-CKAVYG 78 (190)
T ss_pred cCceEEEEcCCCeeeCCcccccCchhHHHHHH-HHHHhC
Confidence 3689999999999985 345677777777776 333334
No 263
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=33.35 E-value=2.9e+02 Score=26.20 Aligned_cols=71 Identities=17% Similarity=0.020 Sum_probs=48.0
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHh
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
+....+.+++++|++.-....+.|-..-...++..|.+.+.=..+....+--.++.+.+|+.+.+..++..
T Consensus 108 dK~~~K~~l~~~gIpt~~~~~~~~~~ea~~~~~~~~~PvVVKp~~~~~gkGV~vv~~~eel~~a~~~~~~~ 178 (426)
T PRK13789 108 SKHFAKSLMKEAKIPTASYKTFTEYSSSLSYLESEMLPIVIKADGLAAGKGVTVATEKKMAKRALKEIFKD 178 (426)
T ss_pred CHHHHHHHHHHcCCCCCCeEeeCCHHHHHHHHHhcCCCEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhh
Confidence 45677889999999876666665432223445667887664444333344567889999999999998753
No 264
>PRK01530 hypothetical protein; Reviewed
Probab=32.58 E-value=36 Score=25.66 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=27.4
Q ss_pred CCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 036723 188 LPRTPVVCKPFEEAFEQVFKIANINPRKTIFF 219 (290)
Q Consensus 188 ~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~i 219 (290)
+.+||+-||-+.+.++.+.+.++++.+++-.+
T Consensus 45 v~ApPvdGkAN~ali~~LAk~l~v~ks~I~Iv 76 (105)
T PRK01530 45 IKAIPEQGKANEEIINYLAKEWKLSRSNIEII 76 (105)
T ss_pred EecCCCCChHHHHHHHHHHHHhCCChhhEEEE
Confidence 56788899999999999999999998776543
No 265
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=32.50 E-value=1.1e+02 Score=27.52 Aligned_cols=41 Identities=22% Similarity=0.277 Sum_probs=27.4
Q ss_pred CCCCCChhHHHHHHcCC---CcEEEEeCCchHHHHHH---HHhcCCC
Q 036723 97 MMLKPDPVLRNLLLSLP---IRKVIFTNADKTHAARV---LSRLGLE 137 (290)
Q Consensus 97 ~~~~~~pg~~~~L~~L~---~~~~ivT~~~~~~~~~~---l~~~gl~ 137 (290)
..-.+.||+.+.+..|+ .++.++||++....+.. +..+|+.
T Consensus 35 ~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 35 LGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred ecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 34567778877777664 78999999866555444 4455554
No 266
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=32.46 E-value=1.5e+02 Score=27.20 Aligned_cols=36 Identities=8% Similarity=-0.036 Sum_probs=25.6
Q ss_pred CCCChhHHHHHHcCC----CcEEEEeCCchHHHHHHHHhc
Q 036723 99 LKPDPVLRNLLLSLP----IRKVIFTNADKTHAARVLSRL 134 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~----~~~~ivT~~~~~~~~~~l~~~ 134 (290)
-.++||+-.+.+.|. ..++.+||++-......-+.+
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi 234 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFI 234 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHH
Confidence 467889988888774 578899998766665444333
No 267
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=31.65 E-value=1.9e+02 Score=26.21 Aligned_cols=65 Identities=15% Similarity=0.207 Sum_probs=42.8
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCcc------chHHHHhcCCeEEEecCCC
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIR------NLETGKRLGLHTVWVGTSH 243 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~------Di~~a~~aGi~~i~v~~~~ 243 (290)
+|+.....++.-.+++....| +.+|+.+..-.++.+.+ .+|=++.| =|++|+..|+.+|-+-+..
T Consensus 125 ~Li~vd~~~pl~~AAT~~VNP-------~TAyrmL~dfv~L~~GD-~vIQNganS~VG~~ViQlaka~GiktinvVRdR 195 (354)
T KOG0025|consen 125 DLIKVDKDIPLASAATLSVNP-------CTAYRMLKDFVQLNKGD-SVIQNGANSGVGQAVIQLAKALGIKTINVVRDR 195 (354)
T ss_pred ceEEcCCcCChhhhheeccCc-------hHHHHHHHHHHhcCCCC-eeeecCcccHHHHHHHHHHHHhCcceEEEeecC
Confidence 445555554433444433332 67888877777888877 56666654 4799999999999886544
No 268
>PRK05090 hypothetical protein; Validated
Probab=31.65 E-value=45 Score=24.67 Aligned_cols=32 Identities=9% Similarity=0.101 Sum_probs=27.2
Q ss_pred CCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEE
Q 036723 188 LPRTPVVCKPFEEAFEQVFKIANINPRKTIFF 219 (290)
Q Consensus 188 ~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~i 219 (290)
+.++|+.||-+.+.++.+.+.|+++.+++-.+
T Consensus 38 v~ApPveGkAN~ali~~LAk~l~v~ks~I~i~ 69 (95)
T PRK05090 38 ITAPPVDGQANAHLLKFLAKQFRVAKSQVVIE 69 (95)
T ss_pred EecCCCCChHHHHHHHHHHHHhCCChhhEEEE
Confidence 56788889999999999999999988776543
No 269
>PF01990 ATP-synt_F: ATP synthase (F/14-kDa) subunit; InterPro: IPR008218 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents subunit F found in the V1 complex of V-ATPases (both eukaryotic and bacterial), as well as in the A1 complex of A-ATPases. Subunit F is a 16 kDa protein that is required for the assembly and activity of V-ATPase, and has a potential role in the differential targeting and regulation of the enzyme for specific organelles. This subunit is not necessary for the rotation of the ATPase V1 rotor, but it does promote catalysis []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 2D00_E 3A5C_P 3J0J_H 3A5D_H 2OV6_A 2QAI_B 3AON_B 2I4R_A.
Probab=31.41 E-value=1e+02 Score=22.37 Aligned_cols=24 Identities=17% Similarity=0.217 Sum_probs=19.6
Q ss_pred EEEEcCCccchHHHHhcCCeEEEec
Q 036723 216 TIFFDDSIRNLETGKRLGLHTVWVG 240 (290)
Q Consensus 216 ~i~iGDs~~Di~~a~~aGi~~i~v~ 240 (290)
+++|||. .-+.+++-+|+....+.
T Consensus 1 IavIGd~-~~v~gFrLaGv~~~~~~ 24 (95)
T PF01990_consen 1 IAVIGDR-DTVLGFRLAGVEGVYVN 24 (95)
T ss_dssp EEEEE-H-HHHHHHHHTTSEEEEES
T ss_pred CEEEeCH-HHHHHHHHcCCCCccCC
Confidence 4688998 67899999999988886
No 270
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=31.37 E-value=1.4e+02 Score=27.05 Aligned_cols=40 Identities=28% Similarity=0.305 Sum_probs=25.8
Q ss_pred CCCChhHHHHHHcCC-------CcEEEEeCCc---hHH-HHHHHHhcCCCC
Q 036723 99 LKPDPVLRNLLLSLP-------IRKVIFTNAD---KTH-AARVLSRLGLED 138 (290)
Q Consensus 99 ~~~~pg~~~~L~~L~-------~~~~ivT~~~---~~~-~~~~l~~~gl~~ 138 (290)
-.+.|++.++++.|+ ++..++||.. ... .+...+++|+.-
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 345788887776554 4588999875 333 344447788753
No 271
>COG4548 NorD Nitric oxide reductase activation protein [Inorganic ion transport and metabolism]
Probab=30.49 E-value=2.1e+02 Score=28.11 Aligned_cols=98 Identities=14% Similarity=0.190 Sum_probs=63.5
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCc---EEEEcCCc-cchH----------------HHH
Q 036723 171 ELFDIDDYCSRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRK---TIFFDDSI-RNLE----------------TGK 230 (290)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e---~i~iGDs~-~Di~----------------~a~ 230 (290)
.+.|+..+++.-.--.+....|....-...+++++.+++.-.|+. .+++.|+. ||+. +|+
T Consensus 508 tvk~FDes~~~~~~~RImALePg~ytR~G~AIR~As~kL~~rpq~qklLivlSDGkPnd~d~YEgr~gIeDTr~AV~eaR 587 (637)
T COG4548 508 TVKDFDESMGETVGPRIMALEPGYYTRDGAAIRHASAKLMERPQRQKLLIVLSDGKPNDFDHYEGRFGIEDTREAVIEAR 587 (637)
T ss_pred eeeccccccccccchhheecCccccccccHHHHHHHHHHhcCcccceEEEEecCCCcccccccccccchhhHHHHHHHHH
Confidence 344555544444334444444555556678899999988766543 67788887 6654 788
Q ss_pred hcCCeEEEecCCCC---------CCCcceeecCHhHHHHHhHHHHHh
Q 036723 231 RLGLHTVWVGTSHR---------AEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 231 ~aGi~~i~v~~~~~---------~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
.-|+.+..|.-+.. -...-..++.+..|...|..|+..
T Consensus 588 k~Gi~VF~Vtld~ea~~y~p~~fgqngYa~V~~v~~LP~~L~~lyrk 634 (637)
T COG4548 588 KSGIEVFNVTLDREAISYLPALFGQNGYAFVERVAQLPGALPPLYRK 634 (637)
T ss_pred hcCceEEEEEecchhhhhhHHHhccCceEEccchhhcchhHHHHHHH
Confidence 99998666643321 112335688899999999888764
No 272
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=29.97 E-value=30 Score=35.79 Aligned_cols=15 Identities=13% Similarity=0.126 Sum_probs=13.0
Q ss_pred ccEEEEecCCCcccC
Q 036723 15 YDCLLFDLDDTIYPL 29 (290)
Q Consensus 15 ~k~viFDlDGTL~d~ 29 (290)
..+++||+||||+..
T Consensus 507 ~rll~LDyDGTL~~~ 521 (797)
T PLN03063 507 NRLLILGFYGTLTEP 521 (797)
T ss_pred CeEEEEecCccccCC
Confidence 469999999999964
No 273
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=29.16 E-value=70 Score=28.03 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=23.8
Q ss_pred CCCcEEEEeCCchHHHHHHHHhcCCCCcc
Q 036723 112 LPIRKVIFTNADKTHAARVLSRLGLEDCF 140 (290)
Q Consensus 112 L~~~~~ivT~~~~~~~~~~l~~~gl~~~f 140 (290)
.+++++++|+.+...+...++.+++..++
T Consensus 36 ~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 36 KGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 34789999999999999999999886543
No 274
>PRK00647 hypothetical protein; Validated
Probab=28.69 E-value=49 Score=24.50 Aligned_cols=30 Identities=13% Similarity=0.182 Sum_probs=25.8
Q ss_pred CCCCCCCCCCcHHHHHHHHHHcCCCCCcEE
Q 036723 188 LPRTPVVCKPFEEAFEQVFKIANINPRKTI 217 (290)
Q Consensus 188 ~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i 217 (290)
+.++|+-||-+...++.+.+.++++.+++-
T Consensus 33 v~ApPvdGKAN~ali~~LAk~l~vpks~I~ 62 (96)
T PRK00647 33 VTEVPEKGKANDAVIALLAKFLSLPKRDVT 62 (96)
T ss_pred EecCCCCChHHHHHHHHHHHHhCCChhhEE
Confidence 567788899999999999999999876653
No 275
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=27.89 E-value=1.8e+02 Score=26.08 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=37.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHH------HhcCCeEEEecCCC
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETG------KRLGLHTVWVGTSH 243 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a------~~aGi~~i~v~~~~ 243 (290)
.-|.++.|..+++.+|++.+.+|++=|..+..-++ +.+|..-|.+..|.
T Consensus 71 ~lp~~e~fa~~~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG 125 (285)
T COG2897 71 MLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGG 125 (285)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCC
Confidence 57889999999999999888777776666555554 45899988876554
No 276
>PRK01310 hypothetical protein; Validated
Probab=26.80 E-value=56 Score=24.56 Aligned_cols=31 Identities=10% Similarity=0.040 Sum_probs=26.8
Q ss_pred CCCCCCCCCCcHHHHHHHHHHcCCCCCcEEE
Q 036723 188 LPRTPVVCKPFEEAFEQVFKIANINPRKTIF 218 (290)
Q Consensus 188 ~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~ 218 (290)
+.+||+.||-+...++.+.+.|+++.+++-.
T Consensus 44 v~apPv~GkAN~ali~~LA~~l~v~ks~I~i 74 (104)
T PRK01310 44 VRAVPEGGEANRALIELLAKALGVPKSSVRL 74 (104)
T ss_pred EecCCCCChHHHHHHHHHHHHhCCChhhEEE
Confidence 5678889999999999999999998876644
No 277
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=26.55 E-value=4.1e+02 Score=23.81 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccchHHHHh
Q 036723 199 EEAFEQVFKIANINPRKTIFFDDSIRNLETGKR 231 (290)
Q Consensus 199 ~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~ 231 (290)
-..|..+.+ .|+ .++.|||+-|.+-|.+-
T Consensus 165 D~lf~~a~~-~gi---~tigIGDGGNEiGMG~v 193 (291)
T PF14336_consen 165 DDLFLAAKE-PGI---PTIGIGDGGNEIGMGNV 193 (291)
T ss_pred HHHHHHhhc-CCC---CEEEECCCchhcccChH
Confidence 344444444 444 49999999988877765
No 278
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=25.36 E-value=3e+02 Score=29.60 Aligned_cols=70 Identities=7% Similarity=0.074 Sum_probs=47.3
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccch-HHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHh
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNL-ETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di-~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
+...++.+++++|++--+...+.+ ..++ +.++..|.+.+.-.........-.++.+.+||.+++...+..
T Consensus 128 DK~~~k~~l~~~GIpvp~~~~v~s-~ee~~~~~~~igyPvVVKP~~g~gG~Gv~iv~~~eEL~~a~~~~~~~ 198 (1068)
T PRK12815 128 DRERFRALMKELGEPVPESEIVTS-VEEALAFAEKIGFPIIVRPAYTLGGTGGGIAENLEELEQLFKQGLQA 198 (1068)
T ss_pred CHHHHHHHHHHcCcCCCCceeeCC-HHHHHHHHHHcCCCEEEEECcCCCCCceEEECCHHHHHHHHHHHHhc
Confidence 456778899999997666666644 4444 456678988664433222233456788999999988877754
No 279
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=25.28 E-value=5.8e+02 Score=24.07 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=68.4
Q ss_pred ChhHHHHHHcCC--CcEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccC
Q 036723 102 DPVLRNLLLSLP--IRKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYC 179 (290)
Q Consensus 102 ~pg~~~~L~~L~--~~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (290)
...+++.+..|. ...++++++........+..+.-. |.++...++
T Consensus 65 ~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~G---D~vl~~~~~------------------------------ 111 (396)
T COG0626 65 RDALEEALAELEGGEDAFAFSSGMAAISTALLALLKAG---DHVLLPDDL------------------------------ 111 (396)
T ss_pred HHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcCCC---CEEEecCCc------------------------------
Confidence 345666666665 446677777665555555555433 667666653
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHHcCCCCCcEEEEcCCcc-chHHHHhc-CCeEEEecCCCCCCCcceeecCHhH
Q 036723 180 SRPNADLELPRTPVVCKPFEEAFEQVFKIANINPRKTIFFDDSIR-NLETGKRL-GLHTVWVGTSHRAEGVDYALESIHN 257 (290)
Q Consensus 180 ~~~~~~~~~~~~~~~~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~-Di~~a~~a-Gi~~i~v~~~~~~~~ad~v~~sl~e 257 (290)
..+.-..+..+++++|+. +.+++++.. .+..+... +.+.+++.++.+ |...+.++..
T Consensus 112 ---------------YG~t~~~~~~~l~~~gi~---~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsN---P~l~v~DI~~ 170 (396)
T COG0626 112 ---------------YGGTYRLFEKILQKFGVE---VTFVDPGDDEALEAAIKEPNTKLVFLETPSN---PLLEVPDIPA 170 (396)
T ss_pred ---------------cchHHHHHHHHHHhcCeE---EEEECCCChHHHHHHhcccCceEEEEeCCCC---cccccccHHH
Confidence 245568889999999984 778888764 55545443 778999988764 4555566666
Q ss_pred HHHH
Q 036723 258 IKEA 261 (290)
Q Consensus 258 l~~~ 261 (290)
+.++
T Consensus 171 i~~~ 174 (396)
T COG0626 171 IARL 174 (396)
T ss_pred HHHH
Confidence 6553
No 280
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
Probab=24.73 E-value=89 Score=26.46 Aligned_cols=68 Identities=12% Similarity=0.109 Sum_probs=50.5
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCc--cchHHHHh-cCCeEEEecCCCCC-CCcceeecCHhHHHHHh
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSI--RNLETGKR-LGLHTVWVGTSHRA-EGVDYALESIHNIKEAL 262 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~--~Di~~a~~-aGi~~i~v~~~~~~-~~ad~v~~sl~el~~~l 262 (290)
|-.|...++..++.+.-.-+=.+.-||=. +|.+..+. .|.+++.+.+|... ..+.++...++++....
T Consensus 23 GSGKTaLie~~~~~L~~~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~ai~~l~~~~ 94 (202)
T COG0378 23 GSGKTALIEKTLRALKDEYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLEAIEELVLDF 94 (202)
T ss_pred CcCHHHHHHHHHHHHHhhCCeEEEeceeechhhHHHHHhCCCCeeEEeccCCccCCcHHHHHHHHHHHhhcC
Confidence 34455888888888865566688899987 59999999 99999999998543 34556666666666543
No 281
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=24.61 E-value=4.2e+02 Score=24.17 Aligned_cols=67 Identities=12% Similarity=0.128 Sum_probs=44.3
Q ss_pred HHHH-HHHHcCCCCCcEEEEcCCccchH-HHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHh
Q 036723 201 AFEQ-VFKIANINPRKTIFFDDSIRNLE-TGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 201 ~~~~-il~~~~~~~~e~i~iGDs~~Di~-~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
..+. +++++|++--....+.+ ..++. .+...|.+.+.=.........-+++++.+||.+++..+++.
T Consensus 103 ~~~~~~~~~~gip~p~~~~~~~-~~~~~~~~~~~g~P~VvKP~~g~~s~gv~~v~~~~el~~~~~~~~~~ 171 (380)
T TIGR01142 103 GIRRLAAEELGLPTSRYMFADS-LDELREAVEKIGYPCVVKPVMSSSGKGQSVVRGPEDIEKAWEYAQEG 171 (380)
T ss_pred HHHHHHHHHCCCCCCCceEeCC-HHHHHHHHHHcCCCEEEEECCCcCCCCeEEECCHHHHHHHHHHHHhh
Confidence 3444 45889997666666654 44553 34578888765544333445567889999999988887654
No 282
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=24.32 E-value=39 Score=33.74 Aligned_cols=37 Identities=8% Similarity=0.119 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCCC-cEEEEcCCccchHHHHhcCCeE
Q 036723 200 EAFEQVFKIANINPR-KTIFFDDSIRNLETGKRLGLHT 236 (290)
Q Consensus 200 ~~~~~il~~~~~~~~-e~i~iGDs~~Di~~a~~aGi~~ 236 (290)
..+..+.+.+.-+.. =...||...+|+-.=+++|++.
T Consensus 636 AcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 636 ACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred HHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCc
Confidence 334444444442111 3788999999999999999983
No 283
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=24.14 E-value=3.7e+02 Score=25.11 Aligned_cols=70 Identities=16% Similarity=0.043 Sum_probs=47.6
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccc-hHHHHhcCCe-EEEecCCCCCCCcceeecCHhHHHHHhHHHHHh
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRN-LETGKRLGLH-TVWVGTSHRAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~D-i~~a~~aGi~-~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
+....+.+++++|++.-....+.+ ..+ .+.+...|.+ .+.=.........-.++.+.+|+.+.+.++++.
T Consensus 104 dK~~~k~~l~~~gIp~p~~~~~~~-~~~~~~~~~~~g~P~~VvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~ 175 (423)
T TIGR00877 104 SKAFAKDFMKRYGIPTAEYEVFTD-PEEALSYIQEKGAPAIVVKADGLAAGKGVIVAKTNEEAIKAVEEILEQ 175 (423)
T ss_pred CHHHHHHHHHHCCCCCCCeEEECC-HHHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHH
Confidence 457778899999998777776655 334 3456678887 443332222233456788999999998888765
No 284
>PRK00885 phosphoribosylamine--glycine ligase; Provisional
Probab=24.04 E-value=5.4e+02 Score=24.05 Aligned_cols=70 Identities=11% Similarity=-0.015 Sum_probs=46.6
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccch-HHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHh
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNL-ETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di-~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
+....+.+++++|++.-....+.+ ..++ +.+...|.+.+.=.........-.++.+.+|+.+++..+++.
T Consensus 102 dK~~~k~~l~~~gip~p~~~~~~~-~~~~~~~~~~~~~P~VvKP~~~~gs~Gv~~v~~~~el~~~~~~~~~~ 172 (420)
T PRK00885 102 SKAFAKDFMARYGIPTAAYETFTD-AEEALAYLDEKGAPIVVKADGLAAGKGVVVAMTLEEAKAAVDDMLAG 172 (420)
T ss_pred CHHHHHHHHHHcCCCCCCeEEeCC-HHHHHHHHHHcCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Confidence 346677889999997666666644 3333 345567887654433333333456788999999999988763
No 285
>PLN02257 phosphoribosylamine--glycine ligase
Probab=24.02 E-value=4.8e+02 Score=24.83 Aligned_cols=69 Identities=14% Similarity=0.017 Sum_probs=46.4
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCccch-HHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHH
Q 036723 198 FEEAFEQVFKIANINPRKTIFFDDSIRNL-ETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWE 267 (290)
Q Consensus 198 ~~~~~~~il~~~~~~~~e~i~iGDs~~Di-~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~ 267 (290)
+....+.+++++|++--....+.| ..++ +.+...|.+.+.=..+....+.-+++.+.+|+.+.+..++.
T Consensus 102 dK~~~K~~l~~~GIptp~~~~~~~-~~e~~~~~~~~g~PvVVKp~~~~~GkGV~iv~~~~el~~a~~~~~~ 171 (434)
T PLN02257 102 SKNFMKDLCDKYKIPTAKYETFTD-PAAAKKYIKEQGAPIVVKADGLAAGKGVVVAMTLEEAYEAVDSMLV 171 (434)
T ss_pred CHHHHHHHHHHcCCCCCCeEEeCC-HHHHHHHHHHcCCCEEEEcCCCCCCCCEEEECCHHHHHHHHHHHHh
Confidence 456778889999998666666643 3343 33456787765444433344556788999999999988754
No 286
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=24.00 E-value=1.7e+02 Score=21.57 Aligned_cols=24 Identities=8% Similarity=0.051 Sum_probs=19.7
Q ss_pred cEEEEcCCccchHHHHhcCCeEEEe
Q 036723 215 KTIFFDDSIRNLETGKRLGLHTVWV 239 (290)
Q Consensus 215 e~i~iGDs~~Di~~a~~aGi~~i~v 239 (290)
++.+||| ..-+.+++-+|+..+.+
T Consensus 2 kIaVIGD-~dtv~GFrLaGi~~~~~ 25 (100)
T PRK02228 2 EIAVIGS-PEFTTGFRLAGIRKVYE 25 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCceEEe
Confidence 4789999 67799999999986653
No 287
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=23.03 E-value=3e+02 Score=21.79 Aligned_cols=63 Identities=10% Similarity=0.032 Sum_probs=44.1
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc-----CCeEEEecCCCCCCCcceeecCHhHH
Q 036723 196 KPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL-----GLHTVWVGTSHRAEGVDYALESIHNI 258 (290)
Q Consensus 196 Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a-----Gi~~i~v~~~~~~~~ad~v~~sl~el 258 (290)
..+...+...++++|++......+.|....+..+-+. +...+....|-....-|++.+.+.++
T Consensus 19 d~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~~~DlVittGG~s~g~~D~t~~al~~~ 86 (152)
T cd00886 19 DRSGPALVELLEEAGHEVVAYEIVPDDKDEIREALIEWADEDGVDLILTTGGTGLAPRDVTPEATRPL 86 (152)
T ss_pred cchHHHHHHHHHHcCCeeeeEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcCcHHHHHHH
Confidence 3445788899999999998999999999887665331 45555555444445567766666665
No 288
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=22.72 E-value=1.6e+02 Score=26.96 Aligned_cols=83 Identities=11% Similarity=0.157 Sum_probs=47.9
Q ss_pred EEEEeCCc--hHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCC
Q 036723 116 KVIFTNAD--KTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPV 193 (290)
Q Consensus 116 ~~ivT~~~--~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (290)
.+|+|+.. ..+.....+.+++ ...+.....+. ..
T Consensus 12 ~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~-~~------------------------------------------ 47 (346)
T PF02350_consen 12 ILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDS-QS------------------------------------------ 47 (346)
T ss_dssp EEEEECSS--CHHHHHHHHHTT---SEEEE--STT-S-------------------------------------------
T ss_pred EEEEeCCCCCHHHHHHHHhhCCC-CCCCccccccc-ch------------------------------------------
Confidence 57888876 8888888888887 55666555443 11
Q ss_pred CCCCcHHHHHHHHHHc-CCCCCcEEEEcCCcc---chHHHHhcCCeEEEecCC
Q 036723 194 VCKPFEEAFEQVFKIA-NINPRKTIFFDDSIR---NLETGKRLGLHTVWVGTS 242 (290)
Q Consensus 194 ~~Kp~~~~~~~il~~~-~~~~~e~i~iGDs~~---Di~~a~~aGi~~i~v~~~ 242 (290)
..+--..++..+.+.+ ..+|+=+++.||+-. -..+|...+++.+.+..|
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 48 MAKSTGLAIIELADVLEREKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC
Confidence 0122223333333322 237788999999984 455677799999999877
No 289
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=22.69 E-value=5.1e+02 Score=23.89 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=56.1
Q ss_pred cEEEEeCCchHHHHHHHHhcCCCCcceeEEeecccCCCCCCccccccccccCCCCCccccccccCCCCCCCCCCCCCCCC
Q 036723 115 RKVIFTNADKTHAARVLSRLGLEDCFERIISFETLNSTDKGTVLVDQDASESERPTELFDIDDYCSRPNADLELPRTPVV 194 (290)
Q Consensus 115 ~~~ivT~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (290)
..++++||..+.+..+...+.-.. |.++...
T Consensus 76 ~~V~~gnGsde~i~~l~~~~~~~g--d~vl~~~----------------------------------------------- 106 (356)
T COG0079 76 ENVLVGNGSDELIELLVRAFVEPG--DTVLIPE----------------------------------------------- 106 (356)
T ss_pred ceEEEcCChHHHHHHHHHHhhcCC--CEEEEcC-----------------------------------------------
Confidence 478889999999998877775443 5555543
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhc---CCeEEEecCCCCCCCcce
Q 036723 195 CKPFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRL---GLHTVWVGTSHRAEGVDY 250 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~a---Gi~~i~v~~~~~~~~ad~ 250 (290)
|.=..|...++..|....++-... -..|++....+ ..+.+++.++.+.-+.-+
T Consensus 107 --Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~ 162 (356)
T COG0079 107 --PTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLL 162 (356)
T ss_pred --CChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCC
Confidence 333788999999998765554443 33565555544 466888888876554433
No 290
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=22.56 E-value=2.4e+02 Score=29.94 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=17.2
Q ss_pred cEEEEcCCccchHHHHhcCC
Q 036723 215 KTIFFDDSIRNLETGKRLGL 234 (290)
Q Consensus 215 e~i~iGDs~~Di~~a~~aGi 234 (290)
.+-|-||+.||--+.++|..
T Consensus 854 ~VgfCGDGANDCgALKaAdv 873 (1140)
T KOG0208|consen 854 KVGFCGDGANDCGALKAADV 873 (1140)
T ss_pred EEEecCCCcchhhhhhhccc
Confidence 47899999999999888775
No 291
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=21.88 E-value=4.8e+02 Score=21.88 Aligned_cols=73 Identities=11% Similarity=0.187 Sum_probs=47.8
Q ss_pred CCCcHHHHHHHHHHcC----CCCCcEEEEcCCcc-----c-----hHHHHhcCCe--EEEecCCCC---------CCCcc
Q 036723 195 CKPFEEAFEQVFKIAN----INPRKTIFFDDSIR-----N-----LETGKRLGLH--TVWVGTSHR---------AEGVD 249 (290)
Q Consensus 195 ~Kp~~~~~~~il~~~~----~~~~e~i~iGDs~~-----D-----i~~a~~aGi~--~i~v~~~~~---------~~~ad 249 (290)
+....+++...++++. .+..=+|.+-|+.| + .++|++.|++ +|+++.... -.+-.
T Consensus 90 g~~TadAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIgiG~~d~~~l~~iA~~tgG~~ 169 (191)
T cd01455 90 GDHTVEATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIFIGSLSDEADQLQRELPAGKA 169 (191)
T ss_pred CccHHHHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEEecCCCHHHHHHHHhCCCCcE
Confidence 3444578888887774 23445888899885 1 2446778887 567765321 22456
Q ss_pred eeecCHhHHHHHhHHHHH
Q 036723 250 YALESIHNIKEALPELWE 267 (290)
Q Consensus 250 ~v~~sl~el~~~l~~~~~ 267 (290)
|...+-.+|.+++.+|+-
T Consensus 170 F~A~d~~~L~~iy~~I~~ 187 (191)
T cd01455 170 FVCMDTSELPHIMQQIFT 187 (191)
T ss_pred EEeCCHHHHHHHHHHHHH
Confidence 778888888888887764
No 292
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.47 E-value=59 Score=23.10 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=12.3
Q ss_pred ccEEEEecCCCccc
Q 036723 15 YDCLLFDLDDTIYP 28 (290)
Q Consensus 15 ~k~viFDlDGTL~d 28 (290)
.-.++++-|||.++
T Consensus 40 ~~~lvL~eDGT~Vd 53 (78)
T cd06539 40 LVTLVLEEDGTVVD 53 (78)
T ss_pred CcEEEEeCCCCEEc
Confidence 45789999999998
No 293
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.39 E-value=59 Score=23.27 Aligned_cols=14 Identities=21% Similarity=0.164 Sum_probs=12.5
Q ss_pred ccEEEEecCCCccc
Q 036723 15 YDCLLFDLDDTIYP 28 (290)
Q Consensus 15 ~k~viFDlDGTL~d 28 (290)
.-.++++-|||.+|
T Consensus 39 ~~~lvLeeDGT~Vd 52 (81)
T cd06537 39 VLTLVLEEDGTAVD 52 (81)
T ss_pred ceEEEEecCCCEEc
Confidence 36899999999998
No 294
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=21.25 E-value=7.5e+02 Score=23.89 Aligned_cols=58 Identities=10% Similarity=-0.007 Sum_probs=37.0
Q ss_pred CcEEEEcCCccchHHHHh---cCCeEEEecCC--CCC-------CCcceeecCHhHHHHHhHHHHHhhCC
Q 036723 214 RKTIFFDDSIRNLETGKR---LGLHTVWVGTS--HRA-------EGVDYALESIHNIKEALPELWEVAGE 271 (290)
Q Consensus 214 ~e~i~iGDs~~Di~~a~~---aGi~~i~v~~~--~~~-------~~ad~v~~sl~el~~~l~~~~~~~~~ 271 (290)
-+++.||-++..+.+|.. .|+.++.+... ... .-+.+...+..++.+.+.+.++..+.
T Consensus 212 ~dvvIIGgGpaGl~aA~~la~~G~~v~li~~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv 281 (517)
T PRK15317 212 YDVLVVGGGPAGAAAAIYAARKGIRTGIVAERFGGQVLDTMGIENFISVPETEGPKLAAALEEHVKEYDV 281 (517)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCeeeccCcccccCCCCCCCHHHHHHHHHHHHHHCCC
Confidence 479999999999888876 67777766431 110 00111123566888888887776653
No 295
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=21.08 E-value=82 Score=21.61 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=16.0
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc
Q 036723 200 EAFEQVFKIANINPRKTIFFDDSI 223 (290)
Q Consensus 200 ~~~~~il~~~~~~~~e~i~iGDs~ 223 (290)
.++...|++.|+.+.++|.|||-.
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T PF09269_consen 43 MGVEKALRKAGAKEGDTVRIGDYE 66 (69)
T ss_dssp TTHHHHHHTTT--TT-EEEETTEE
T ss_pred CCHHHHHHHcCCCCCCEEEEcCEE
Confidence 456667777888999999999853
No 296
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=20.54 E-value=2.6e+02 Score=26.10 Aligned_cols=87 Identities=15% Similarity=0.034 Sum_probs=53.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecC-CCCCCCcceeecCHhHHHHHhHHHHHhhCCCCCccccc
Q 036723 201 AFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGT-SHRAEGVDYALESIHNIKEALPELWEVAGENSESISYS 279 (290)
Q Consensus 201 ~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~-~~~~~~ad~v~~sl~el~~~l~~~~~~~~~~~~~~~~~ 279 (290)
.=+..++.+|++......+.|...=...+...|.+.|.=.. +.-.-+..+++.+..++........+.. .. ...+-
T Consensus 102 ~eK~~l~~~Gi~va~~~~v~~~~el~~~~~~~g~p~VlKtr~gGYDGkGQ~~i~~~~~~~~~~~~~~~~~--~~-vlE~f 178 (375)
T COG0026 102 VEKQFLDKAGLPVAPFQVVDSAEELDAAAADLGFPAVLKTRRGGYDGKGQWRIRSDADLELRAAGLAEGG--VP-VLEEF 178 (375)
T ss_pred HHHHHHHHcCCCCCCeEEeCCHHHHHHHHHHcCCceEEEeccccccCCCeEEeeCcccchhhHhhhhccC--ce-eEEee
Confidence 33466778899888888888776445567789977665433 3334556788888888776444332222 11 33444
Q ss_pred ceeeeeeeccC
Q 036723 280 GKVSIETSVIA 290 (290)
Q Consensus 280 ~~~~~~~~~~~ 290 (290)
..+.=|.|||+
T Consensus 179 V~F~~EiSvi~ 189 (375)
T COG0026 179 VPFEREISVIV 189 (375)
T ss_pred cccceEEEEEE
Confidence 55566666653
No 297
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=20.28 E-value=2.7e+02 Score=24.02 Aligned_cols=29 Identities=17% Similarity=0.051 Sum_probs=21.7
Q ss_pred CCcEEEEcCCc----cchHHHHhcCCeEEEecC
Q 036723 213 PRKTIFFDDSI----RNLETGKRLGLHTVWVGT 241 (290)
Q Consensus 213 ~~e~i~iGDs~----~Di~~a~~aGi~~i~v~~ 241 (290)
-+++.||||.. ||.+.....+...+.|..
T Consensus 175 ~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~ 207 (220)
T PF03332_consen 175 FDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTS 207 (220)
T ss_dssp -SEEEEEESS-STTSTTHHHHHSTTSEEEE-SS
T ss_pred cceEEEEehhccCCCCCceeeecCCccEEEeCC
Confidence 68999999987 899999888876666643
No 298
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=20.24 E-value=59 Score=22.87 Aligned_cols=14 Identities=29% Similarity=0.256 Sum_probs=12.2
Q ss_pred ccEEEEecCCCccc
Q 036723 15 YDCLLFDLDDTIYP 28 (290)
Q Consensus 15 ~k~viFDlDGTL~d 28 (290)
.-.++++-|||.++
T Consensus 38 ~~~l~L~eDGT~Vd 51 (74)
T smart00266 38 PVTLVLEEDGTIVD 51 (74)
T ss_pred CcEEEEecCCcEEc
Confidence 45788999999998
No 299
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=20.06 E-value=6.3e+02 Score=23.14 Aligned_cols=68 Identities=16% Similarity=0.121 Sum_probs=44.4
Q ss_pred HHHHHHH-HHcCCCCCcEEEEcCCccchH-HHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHh
Q 036723 200 EAFEQVF-KIANINPRKTIFFDDSIRNLE-TGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 200 ~~~~~il-~~~~~~~~e~i~iGDs~~Di~-~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
...+.++ +++|++--....+. +..|+. .+...|.+.|.=.........-.++++.+|+.+.+..+.+.
T Consensus 115 ~~~k~~l~~~~gip~p~~~~~~-s~~~l~~~~~~~g~P~VvKP~~g~~s~Gv~~v~~~~el~~~~~~~~~~ 184 (395)
T PRK09288 115 EGIRRLAAEELGLPTSPYRFAD-SLEELRAAVEEIGYPCVVKPVMSSSGKGQSVVRSPEDIEKAWEYAQEG 184 (395)
T ss_pred HHHHHHHHHhCCCCCCCceEEC-CHHHHHHHHHhcCCCEEEEeCCCcCCCCeEEECCHHHHHHHHHHHHhh
Confidence 4445555 57899766666665 455653 34568888765544333344567889999999988886653
No 300
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.
Probab=20.04 E-value=4.7e+02 Score=28.10 Aligned_cols=72 Identities=11% Similarity=0.003 Sum_probs=48.1
Q ss_pred CcHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHhcCCeEEEecCCCCCCCcceeecCHhHHHHHhHHHHHh
Q 036723 197 PFEEAFEQVFKIANINPRKTIFFDDSIRNLETGKRLGLHTVWVGTSHRAEGVDYALESIHNIKEALPELWEV 268 (290)
Q Consensus 197 p~~~~~~~il~~~~~~~~e~i~iGDs~~Di~~a~~aGi~~i~v~~~~~~~~ad~v~~sl~el~~~l~~~~~~ 268 (290)
-+...++..++++|++--....+.+-..-.+.++..|.+.+.=.........-.++.+.+||.+++...+..
T Consensus 126 ~DK~~~k~~l~~~Gipvp~~~~v~s~~e~~~~~~~igyPvIVKP~~g~gg~Gv~iv~~~eeL~~~~~~~~~~ 197 (1050)
T TIGR01369 126 EDRELFREAMKEIGEPVPESEIAHSVEEALAAAKEIGYPVIVRPAFTLGGTGGGIAYNREELKEIAERALSA 197 (1050)
T ss_pred CCHHHHHHHHHHCCCCCCCeeecCCHHHHHHHHHHhCCCeEEECCCCCCCCCeEEECCHHHHHHHHHHHHhc
Confidence 446778889999999876676665433334566788988664433222233456788999999888777653
Done!