BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036725
         (392 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2AVN|A Chain A, Crystal Structure Of A UbiquinoneMENAQUINONE BIOSYNTHESIS
           Methyltransferase-Related Protein (Tm1389) From
           Thermotoga Maritima Msb8 At 2.35 A Resolution
 pdb|2AVN|B Chain B, Crystal Structure Of A UbiquinoneMENAQUINONE BIOSYNTHESIS
           Methyltransferase-Related Protein (Tm1389) From
           Thermotoga Maritima Msb8 At 2.35 A Resolution
          Length = 260

 Score = 40.4 bits (93), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 4/96 (4%)

Query: 209 ALDTGCGVASWGAYLFKKNVITMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSR 268
            LD G G   W  +L ++    +   P    +  ++ A E+GV  V+       LP+PS 
Sbjct: 58  VLDLGGGTGKWSLFLQERGFEVVLVDP---SKEXLEVAREKGVKNVVEAKAE-DLPFPSG 113

Query: 269 AFDMAHCSRCLIPWSANDGMYMMEIDRVLRPGGYWV 304
           AF+       ++ +  N      EI RVL P G  +
Sbjct: 114 AFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLI 149


>pdb|3HCA|A Chain A, Crystal Structure Of E185q Hpnmt In Complex With
           Octopamine And Adohcy
 pdb|3HCA|B Chain B, Crystal Structure Of E185q Hpnmt In Complex With
           Octopamine And Adohcy
          Length = 289

 Score = 29.6 bits (65), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 13/75 (17%)

Query: 235 PRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWSANDGMYMMEID 294
           P D H+ Q    L  G PA          P P+ A   A C + + P  A+    +  I 
Sbjct: 156 PIDVHQPQ---PLGAGSPA----------PLPADALVSAFCLQAVSPDLASFQRALDHIT 202

Query: 295 RVLRPGGYWVLSGPL 309
            +LRPGG+ +L G L
Sbjct: 203 TLLRPGGHLLLIGAL 217


>pdb|1YZ3|A Chain A, Structure Of Human Pnmt Complexed With Cofactor Product
           Adohcy And Inhibitor Sk&f 64139
 pdb|1YZ3|B Chain B, Structure Of Human Pnmt Complexed With Cofactor Product
           Adohcy And Inhibitor Sk&f 64139
 pdb|2AN3|A Chain A, Structure Of Pnmt With S-Adenosyl-L-Homocysteine And The
           Semi-Rigid Analogue Acceptor Substrate
           Cis-(1r,2s)-2-Amino-1-Tetralol.
 pdb|2AN3|B Chain B, Structure Of Pnmt With S-Adenosyl-L-Homocysteine And The
           Semi-Rigid Analogue Acceptor Substrate
           Cis-(1r,2s)-2-Amino-1-Tetralol.
 pdb|2AN4|A Chain A, Structure Of Pnmt Complexed With S-Adenosyl-L-Homocysteine
           And The Acceptor Substrate Octopamine
 pdb|2AN4|B Chain B, Structure Of Pnmt Complexed With S-Adenosyl-L-Homocysteine
           And The Acceptor Substrate Octopamine
 pdb|2AN5|A Chain A, Structure Of Human Pnmt Complexed With S-Adenosyl-
           Homocysteine And An Inhibitor, Trans-(1s,2s)-2-Amino-1-
           Tetralol
 pdb|2AN5|B Chain B, Structure Of Human Pnmt Complexed With S-Adenosyl-
           Homocysteine And An Inhibitor, Trans-(1s,2s)-2-Amino-1-
           Tetralol
 pdb|2G8N|A Chain A, Structure Of Hpnmt With Inhibitor 3-Hydroxymethyl-7-(N-4-
           Chlorophenylaminosulfonyl)-Thiq And Adohcy
 pdb|2G8N|B Chain B, Structure Of Hpnmt With Inhibitor 3-Hydroxymethyl-7-(N-4-
           Chlorophenylaminosulfonyl)-Thiq And Adohcy
 pdb|2G70|A Chain A, Structure Of Human Pnmt In Complex With Inhibitor
           3-hydroxymethyl-7- Nitro-thiq And Adomet (sam)
 pdb|2G70|B Chain B, Structure Of Human Pnmt In Complex With Inhibitor
           3-hydroxymethyl-7- Nitro-thiq And Adomet (sam)
 pdb|2G71|A Chain A, Structure Of Hpnmt With Inhibitor
           3-fluoromethyl-7-trifluoropropyl- Thiq And Adohcy
 pdb|2G71|B Chain B, Structure Of Hpnmt With Inhibitor
           3-fluoromethyl-7-trifluoropropyl- Thiq And Adohcy
 pdb|2G72|A Chain A, Structure Of Hpnmt With Inhibitor 3-Fluoromethyl-7-
           Thiomorpholinosulfonamide-Thiq And Adomet
 pdb|2G72|B Chain B, Structure Of Hpnmt With Inhibitor 3-Fluoromethyl-7-
           Thiomorpholinosulfonamide-Thiq And Adomet
 pdb|2ONY|A Chain A, Structure Of Hpnmt With Inhibitor
           7-(N-4-Chlorophenylaminosulfonyl)- Thiq And Adohcy
 pdb|2ONY|B Chain B, Structure Of Hpnmt With Inhibitor
           7-(N-4-Chlorophenylaminosulfonyl)- Thiq And Adohcy
 pdb|3HCB|A Chain A, Crystal Structure Of Hpnmt In Complex With Noradrenochrome
           And Adohcy
 pdb|3HCB|B Chain B, Crystal Structure Of Hpnmt In Complex With Noradrenochrome
           And Adohcy
 pdb|3HCC|A Chain A, Crystal Structure Of Hpnmt In Complex With Anti-9-Amino-5-
           (Trifluromethyl) Benzonorbornene And Adohcy
 pdb|3HCC|B Chain B, Crystal Structure Of Hpnmt In Complex With Anti-9-Amino-5-
           (Trifluromethyl) Benzonorbornene And Adohcy
 pdb|3HCD|A Chain A, Crystal Structure Of Hpnmt In Complex With Noradrenaline
           And Adohcy
 pdb|3HCD|B Chain B, Crystal Structure Of Hpnmt In Complex With Noradrenaline
           And Adohcy
 pdb|3HCF|A Chain A, Crystal Structure Of Hpnmt In Complex With
           3-Trifluoromethyl Phenylethanolamine And Adohcy
 pdb|3HCF|B Chain B, Crystal Structure Of Hpnmt In Complex With
           3-Trifluoromethyl Phenylethanolamine And Adohcy
 pdb|3KPJ|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And Bound
           Phosphate
 pdb|3KPJ|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And Bound
           Phosphate
 pdb|3KPU|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           4-Quinolinol
 pdb|3KPU|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           4-Quinolinol
 pdb|3KPV|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And Adenine
 pdb|3KPV|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And Adenine
 pdb|3KPW|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           1-Aminoisoquinoline
 pdb|3KPW|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           1-Aminoisoquinoline
 pdb|3KPY|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           6-Chlorooxindole
 pdb|3KPY|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           6-Chlorooxindole
 pdb|3KQM|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           4-Bromo-1h-Imidazole
 pdb|3KQM|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           4-Bromo-1h-Imidazole
 pdb|3KQO|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           6-Chloropurine
 pdb|3KQO|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           6-Chloropurine
 pdb|3KQP|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           6-Aminoquinoline
 pdb|3KQP|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           6-Aminoquinoline
 pdb|3KQQ|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Hydroxynicotinic Acid
 pdb|3KQQ|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Hydroxynicotinic Acid
 pdb|3KQS|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Aminobenzimidazole
 pdb|3KQS|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Aminobenzimidazole
 pdb|3KQT|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Amino-1- Methylbenzimidazole
 pdb|3KQT|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Amino-1- Methylbenzimidazole
 pdb|3KQV|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           Formanilide
 pdb|3KQV|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           Formanilide
 pdb|3KQW|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           5-Chlorobenzimidazole
 pdb|3KQW|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           5-Chlorobenzimidazole
 pdb|3KQY|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Amino-1h- Benzo[d]imidazol-7-Ol
 pdb|3KQY|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Amino-1h- Benzo[d]imidazol-7-Ol
 pdb|3KR0|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Amino-1h- Benzo[d]imidazol-6-Ol
 pdb|3KR0|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           2-Amino-1h- Benzo[d]imidazol-6-Ol
 pdb|3KR1|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           5-Chloro-1h- Benzo[d]imidazol-2-Amine
 pdb|3KR1|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           5-Chloro-1h- Benzo[d]imidazol-2-Amine
 pdb|3KR2|A Chain A, Crystal Structure Of Hpnmt In Complex Adohcy And
           5-Fluoro-1h- Benzo[d]imidazol-2-Amine
 pdb|3KR2|B Chain B, Crystal Structure Of Hpnmt In Complex Adohcy And
           5-Fluoro-1h- Benzo[d]imidazol-2-Amine
 pdb|4DM3|A Chain A, Crystal Structure Of Human Pnmt In Complex Adohcy,
           Resorcinol And Imidazole
 pdb|4DM3|B Chain B, Crystal Structure Of Human Pnmt In Complex Adohcy,
           Resorcinol And Imidazole
          Length = 289

 Score = 29.3 bits (64), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 235 PRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWSANDGMYMMEID 294
           P D H+ Q    L  G PA          P P+ A   A C   + P  A+    +  I 
Sbjct: 156 PIDVHQPQ---PLGAGSPA----------PLPADALVSAFCLEAVSPDLASFQRALDHIT 202

Query: 295 RVLRPGGYWVLSGPL 309
            +LRPGG+ +L G L
Sbjct: 203 TLLRPGGHLLLIGAL 217


>pdb|1HNN|A Chain A, Crystal Structure Of Human Pnmt Complexed With Sk&f 29661
           And Adohcy(Sah)
 pdb|1HNN|B Chain B, Crystal Structure Of Human Pnmt Complexed With Sk&f 29661
           And Adohcy(Sah)
 pdb|1N7I|A Chain A, The Structure Of Phenylethanolamine N-Methyltransferase In
           Complex With S-Adenosylhomocysteine And The Inhibitor
           Ly134046
 pdb|1N7I|B Chain B, The Structure Of Phenylethanolamine N-Methyltransferase In
           Complex With S-Adenosylhomocysteine And The Inhibitor
           Ly134046
 pdb|1N7J|A Chain A, The Structure Of Phenylethanolamine N-Methyltransferase In
           Complex With S-Adenosylhomocysteine And An Iodinated
           Inhibitor
 pdb|1N7J|B Chain B, The Structure Of Phenylethanolamine N-Methyltransferase In
           Complex With S-Adenosylhomocysteine And An Iodinated
           Inhibitor
          Length = 282

 Score = 29.3 bits (64), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 235 PRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWSANDGMYMMEID 294
           P D H+ Q    L  G PA          P P+ A   A C   + P  A+    +  I 
Sbjct: 156 PIDVHQPQ---PLGAGSPA----------PLPADALVSAFCLEAVSPDLASFQRALDHIT 202

Query: 295 RVLRPGGYWVLSGPL 309
            +LRPGG+ +L G L
Sbjct: 203 TLLRPGGHLLLIGAL 217


>pdb|2OBF|A Chain A, Structure Of K57a Hpnmt With Inhibitor
           3-Hydroxymethyl-7-(N-4- Chlorophenylaminosulfonyl)-Thiq
           And Adohcy (Sah)
 pdb|2OBF|B Chain B, Structure Of K57a Hpnmt With Inhibitor
           3-Hydroxymethyl-7-(N-4- Chlorophenylaminosulfonyl)-Thiq
           And Adohcy (Sah)
 pdb|2ONZ|A Chain A, Structure Of K57a Hpnmt With Inhibitor 7-(N-4-
           Chlorophenylaminosulfonyl)-Thiq And Adohcy
 pdb|2ONZ|B Chain B, Structure Of K57a Hpnmt With Inhibitor 7-(N-4-
           Chlorophenylaminosulfonyl)-Thiq And Adohcy
 pdb|2OPB|A Chain A, Structure Of K57a Hpnmt With Inhibitor 3-Fluoromethyl-7-
           Thiomorpholinosulfonamide-Thiq And Adohcy
 pdb|2OPB|B Chain B, Structure Of K57a Hpnmt With Inhibitor 3-Fluoromethyl-7-
           Thiomorpholinosulfonamide-Thiq And Adohcy
          Length = 289

 Score = 29.3 bits (64), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 235 PRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWSANDGMYMMEID 294
           P D H+ Q    L  G PA          P P+ A   A C   + P  A+    +  I 
Sbjct: 156 PIDVHQPQ---PLGAGSPA----------PLPADALVSAFCLEAVSPDLASFQRALDHIT 202

Query: 295 RVLRPGGYWVLSGPL 309
            +LRPGG+ +L G L
Sbjct: 203 TLLRPGGHLLLIGAL 217


>pdb|3HCE|A Chain A, Crystal Structure Of E185d Hpnmt In Complex With
           Octopamine And Adohcy
 pdb|3HCE|B Chain B, Crystal Structure Of E185d Hpnmt In Complex With
           Octopamine And Adohcy
          Length = 289

 Score = 28.5 bits (62), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 235 PRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWSANDGMYMMEID 294
           P D H+ Q    L  G PA          P P+ A   A C   + P  A+    +  I 
Sbjct: 156 PIDVHQPQ---PLGAGSPA----------PLPADALVSAFCLDAVSPDLASFQRALDHIT 202

Query: 295 RVLRPGGYWVLSGPL 309
            +LRPGG+ +L G L
Sbjct: 203 TLLRPGGHLLLIGAL 217


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.137    0.455 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,027,871
Number of Sequences: 62578
Number of extensions: 567579
Number of successful extensions: 878
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 874
Number of HSP's gapped (non-prelim): 7
length of query: 392
length of database: 14,973,337
effective HSP length: 101
effective length of query: 291
effective length of database: 8,652,959
effective search space: 2518011069
effective search space used: 2518011069
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)