BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036731
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 167 bits (423), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 124/217 (57%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+TV Y T+IDG CK G + A + F +M +I P+V+TY ++I GFC D EA L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM +GL+ D VTF +++ CK M +A R+ + MIQ G P N+V Y L
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP------NVVTYTTL 462
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
IDGLCK G L +A EL + + GL PN+ TYN ++ LC +++A L + E G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+ V +TTLM ++ + E K E+L+ M + + P
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 126/248 (50%), Gaps = 6/248 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTY T+IDGLCKEG +D A EL +M + PN+ TYNS+++G C + + EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
L E GL +D VT+ +MD CK+ +MD+A +L M+ G++P IV +
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP------TIVTFN 565
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
L++G C G L++ +L + G+ PN T+N + C + A ++ DM +
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNS 251
GV P+ + L+ + + L + M + S S+++ +K + L +
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 252 IPQFNRQK 259
F++ +
Sbjct: 686 REVFDQMR 693
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P++VT+ +I+G CK G + A + M +PNVVTY +LI G C D + A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L EM GLQ ++ T+N I++ LCK+ ++EA +L+ G+ D V Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT------VTYTT 531
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
L+D CK G++ A+E+ + + GL P +VT+N+ ++ C ++ L M KG
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+APN F +L+ + +N + + M R V P
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 6/230 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N +YN +I +C+ G + +A L L M+ + P+V++Y+++++G+C + ++ L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
M +GL+ + + I+ LC+ K+ EA MI+ G+ PD V Y LI
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT------VVYTTLI 358
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
DG CK G ++ A + + + P+V+TY I C M +A LF +M KG+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
P+ V FT L+ + + + M + P + ++D L K
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Query: 38 LFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELC 97
+F + + + NV +YN +IH C EA +L + M +G DV++++ +++ C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 98 KNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAG 157
+ ++D+ +L+++M + G++P+++ YG +I LC+I KL A E + R G
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSY------IYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 158 LMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVI 217
++P+ V Y I C + A F +M + + P+ + +T ++ F + + +
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 218 ELLRSMDKRNVMP 230
+L M + + P
Sbjct: 407 KLFHEMFCKGLEP 419
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN T+N+++ C + A ++ M + P+ TY +L+ G C A + EA +L
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD 120
F EM +G V T++V++ K +K EA + D M + G+ D
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 84 SDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCK-IGK 142
SD F+V L + EA R+ + M+ G+ +++ + + L K K
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGL------VLSVDSCNVYLTRLSKDCYK 226
Query: 143 LKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTT 202
A + + G+ NV +YNI IH +C ++ +AH L L ME+KG P+ + ++T
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 203 LMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
++ + R E KV +L+ M ++ + P + I I+ LL +
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TY ++ G CK + +A LF +MK + + +V TY+ LI GF EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQ 114
F +M GL +D F+ D K ++ D +D +I+
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 134/243 (55%), Gaps = 6/243 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN VTY +I LCK G V+ A F QM DE ++P + YNSLIHG C N AE L
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+EM+DRG+ + + FN I+D CK ++ E+ +L +LM++ GV+P N++ Y L
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP------NVITYNTL 517
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I+G C GK+ A +L + GL PN VTY+ I+ C +M+ A LF +ME GV
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIP 253
+P+ + + ++ + T+ EL + + S +II+ L KN+++ +++
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 254 QFN 256
F
Sbjct: 638 MFQ 640
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 137/267 (51%), Gaps = 34/267 (12%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENIN---PNVVTYNSLIHGFCYANDGN 68
C PN +YN ++ GLC E +A EL M D+ P+VV+Y ++I+GF D +
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD-------- 120
+A + EM+DRG+ DVVT+N I+ LCK + MD+A +L+ M++ GV PD
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 121 -AFC--------------------EINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLM 159
+C E ++V Y L+D LCK G+ AR++ S+T+ GL
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 160 PNVVTYNITIHALCNDEQMDKAHDLFLDMEVK-GVAPNCVIFTTLMPSFIRKNETSKVIE 218
P + TY + + + H L LD+ V+ G+ P+ +F+ L+ ++ ++ + + +
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGL-LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392
Query: 219 LLRSMDKRNVMPYASILSIIVDLLVKN 245
+ M ++ + P A ++ +L K+
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKS 419
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ VTYN+II LCK +DKA E+ M + P+ +TYNS++HG+C + EA
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M G++ DVVT++++MD LCKN + EA ++ D M + G++P+ I YG L
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE------ITTYGTL 342
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+ G G L L + R G+ P+ ++I I A ++D+A +F M +G+
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN V + ++ + + M + P
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 7/237 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN +TYNT+I+G C G +D+A +L M + PN VTY++LI+G+C + +A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF EM G+ D++T+N+I+ L + R+ A L + + G +I + Y
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT------QIELSTYNI 621
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
++ GLCK +A ++ Q+L L T+NI I AL + D+A DLF+ G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV-DLLVKNEIS 248
+ PN + + + I + ++ +L SM+ + +L+ IV +LL + EI+
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEIT 738
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 124/230 (53%), Gaps = 6/230 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPNTVTY+T+I+G CK ++ A LF +M+ ++P+++TYN ++ G A+
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L++ + + G Q ++ T+N+I+ LCKN+ D+A ++ + ++ +A +
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA------RTFNI 656
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID L K+G+ A++L + + GL+PN TY + + +++ LFL ME G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
+ + ++ +++ E ++ L +D+++ AS S+ +DLL
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 10/227 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VTY+ ++D LCK G +A+++F M + P + TY +L+ G+ E
Sbjct: 298 EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ G+ D F++++ K K+D+A + M Q G+ P+A V YG
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA------VTYGA 411
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+I LCK G++++A + + GL P + YN IH LC + ++A +L L+M +G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 193 VAPNCVIFTTLMPSFIRKN---ETSKVIELL-RSMDKRNVMPYASIL 235
+ N + F +++ S ++ E+ K+ EL+ R K NV+ Y +++
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 45 ENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDE 104
+ + P++ TY LI C A + ++ +G + D + F ++ LC +++ +
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 105 ATRL-LDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLT---RAGLMP 160
A + L M + G P N+ +Y L+ GLC + + A EL + G P
Sbjct: 141 AMDIVLRRMTELGCIP------NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 161 NVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELL 220
+VV+Y I+ + DKA+ + +M +G+ P+ V + +++ + + K +E+L
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 221 RSMDKRNVMP----YASIL 235
+M K VMP Y SIL
Sbjct: 255 NTMVKNGVMPDCMTYNSIL 273
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 85 DVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLK 144
D+ T+ +++ C+ ++D L +I+ G R DA +A+ L+ GLC +
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDA------IAFTPLLKGLCADKRTS 139
Query: 145 NARELS-QSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLF---LDMEVKGVAPNCVIF 200
+A ++ + +T G +PNV +YNI + LC++ + +A +L D G P+ V +
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 201 TTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
TT++ F ++ ++ K M R ++P + I+ L K +
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TY+++I+G C +D+AK +F M ++ PNVVTYN+LI GFC A E L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM RGL + VT+N ++ L + D A ++ M+ GV PD I+ Y L
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD------IITYSIL 471
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DGLCK GKL+ A + + L ++ + P++ TYNI I +C +++ DLF + +KGV
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN +I+TT++ F RK + L R M + +P
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTYNT+I G CK V++ ELF +M + N VTYN+LI G A D + A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ D++T+++++D LCK K+++A + + + + + PD I Y
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD------IYTYN 504
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+++ +L SL+ G+ PNV+ Y I C ++A LF +M+
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G PN + TL+ + +R + + EL++ M + AS +S+++++L
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 6/218 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+P+ TY T+++GLCK G +D A L +M+ I +VV Y ++I C + N+A
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM ++G++ +VVT+N ++ LC + +A+RLL MI+ + P N+V +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP------NVVTFS 329
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LID K GKL A +L + + + P++ TY+ I+ C +++D+A +F M K
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVM 229
PN V + TL+ F + + +EL R M +R ++
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 6/232 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ + V Y TIID LC V+ A LF +M ++ I PNVVTYNSLI C ++A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M++R + +VVTF+ ++D K K+ EA +L D MI+ + PD F Y
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF------TYSS 365
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C +L A+ + + + PNVVTYN I C +++++ +LF +M +G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+ N V + TL+ + + ++ + M V P SI++D L K
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 119/232 (51%), Gaps = 6/232 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN VTYN++I LC G A L M + INPNVVT+++LI F EAE
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L+ EM+ R + D+ T++ +++ C + ++DEA + +LMI P N+V Y
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP------NVVTYNT 400
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI G CK +++ EL + +++ GL+ N VTYN I L D A +F M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
V P+ + ++ L+ + + K + + + K + P +I+++ + K
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 10/227 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT +++++G C + +A L QM PN VT+N+LIHG N +EA
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ RG Q D+ T+ +++ LCK +D A LL M +G + D +V Y
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD------VVIYTT 260
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID LC + +A L + G+ PNVVTYN I LCN + A L DM +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASIL 235
+ PN V F+ L+ +F+++ + + +L M KR++ P Y+S++
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 6/227 (2%)
Query: 18 TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEM 77
+YN +I+ C+ + A + +M P++VT +SL++G+C+ +EA L +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 78 MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGL 137
Q + VTFN ++ L + K EA L+D M+ G +PD F YG +++GL
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF------TYGTVVNGL 230
Query: 138 CKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNC 197
CK G + A L + + + + +VV Y I ALCN + ++ A +LF +M+ KG+ PN
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 198 VIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
V + +L+ S LL M +R + P S ++D VK
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN + Y T+I G C++G ++A LF +MK++ PN TYN+LI D +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L EM G D T +++++ L R
Sbjct: 592 LIKEMRSCGFVGDASTISMVINMLHDGR 619
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 131/228 (57%), Gaps = 6/228 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+P+ TYN +ID LC +G +D+A + QM+ +V+TYN+LI GFC AN EAE
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F EM G+ + VT+N ++D LCK+R++++A +L+D MI G +PD + Y
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY------TYN 544
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
L+ C+ G +K A ++ Q++T G P++VTY I LC +++ A L +++K
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
G+ + ++ RK +T++ I L R M ++N P ++ IV
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 121/229 (52%), Gaps = 10/229 (4%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PNTVTYNT+I LCKE V++A EL + + I P+V T+NSLI G C + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM +G + D T+N+++D LC K+DEA +L M G C +++ Y
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG------CARSVITYN 474
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LIDG CK K + A E+ + G+ N VTYN I LC +++ A L M ++
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASILS 236
G P+ + +L+ F R + K +++++M P Y +++S
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 125/232 (53%), Gaps = 6/232 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ T+NT+++GLCK G V A E+ M E +P+V TYNS+I G C + EA +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M+ R + VT+N ++ LCK +++EAT L ++ G+ PD + + L
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD------VCTFNSL 406
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I GLC + A EL + + G P+ TYN+ I +LC+ ++D+A ++ ME+ G
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
A + + + TL+ F + N+T + E+ M+ V + + ++D L K+
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 32/254 (12%)
Query: 7 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAND 66
EFG+ KP+T YN +++ L + + +M I P+V T+N LI C A+
Sbjct: 147 EFGL--KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 67 GNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGG---------V 117
A + +M GL D TF +M + +D A R+ + M++ G V
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 118 RPDAFCE-------INIV--------------AYGCLIDGLCKIGKLKNARELSQSLTRA 156
FC+ +N + + L++GLCK G +K+A E+ + +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 157 GLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKV 216
G P+V TYN I LC ++ +A ++ M + +PN V + TL+ + ++N+ +
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 217 IELLRSMDKRNVMP 230
EL R + + ++P
Sbjct: 385 TELARVLTSKGILP 398
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ TYN+++ C+ G + KA ++ M P++VTY +LI G C A A
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMI-QGGVRPDAFCEINIVAYG 131
L + +G+ +N ++ L + RK EA L M+ Q PDA V+Y
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA------VSYR 650
Query: 132 CLIDGLCK-IGKLKNARELSQSLTRAGLMP 160
+ GLC G ++ A + L G +P
Sbjct: 651 IVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 121/217 (55%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TY+++I+G C +D+AK +F M ++ PNVVTYN+LI+GFC A +E L
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM RGL + VT+ ++ + R D A + M+ GV P NI+ Y L
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP------NIMTYNTL 476
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DGLCK GKL+ A + + L R+ + P + TYNI I +C +++ DLF + +KGV
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
P+ +I+ T++ F RK + L R M + +P
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 125/233 (53%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ N V Y+T+ID LCK D A LF +M+++ + PNV+TY+SLI C ++A
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M++R + +VVTFN ++D K K+ EA +L D MI+ + PD F Y
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF------TYSS 370
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C +L A+ + + + PNVVTYN I+ C +++D+ +LF +M +G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ N V +TTL+ F + + + + M V P + ++D L KN
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 107/185 (57%), Gaps = 6/185 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTYNT+I+G CK +D+ ELF +M + N VTY +LIHGF A D + A+
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ +++T+N ++D LCKN K+++A + + + + + P I Y
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP------TIYTYN 509
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+++ +L SL+ G+ P+V+ YN I C ++A LF M
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 192 GVAPN 196
G P+
Sbjct: 570 GPLPD 574
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N TYN +I+ C+ + A L +M P++VT +SL++G+C+ ++A L
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+M++ G + D +TF ++ L + K EA L+D M+Q G +P N+V YG ++
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP------NLVTYGVVV 232
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
+GLCK G + A L + A + NVV Y+ I +LC D A +LF +ME KGV
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
PN + +++L+ S LL M +R + P + ++D VK
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 10/227 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT +++++G C + A L QM + P+ +T+ +LIHG N +EA
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ RG Q ++VT+ V+++ LCK +D A LL+ M + E N+V Y
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI------EANVVIYST 265
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID LCK +A L + G+ PNV+TY+ I LCN E+ A L DM +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASIL 235
+ PN V F L+ +F+++ + + +L M KR++ P Y+S++
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 10/227 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ +N ++ + K D L +M+ I+ N+ TYN LI+ FC + + A L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+MM G + +VT + +++ C +++ +A L+D M++ G RPD + + L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT------ITFTTL 196
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I GL K A L + + G PN+VTY + ++ LC +D A +L ME +
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASILS 236
N VI++T++ S + + L M+ + V P Y+S++S
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN +TYNT++DGLCK G ++KA +F ++ + P + TYN +I G C A + L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDA 121
F + +G++ DV+ +N ++ C+ +EA L M + G PD+
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 121/237 (51%), Gaps = 6/237 (2%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGN 68
G+ KPN VTY T+I LCK ++ A ELF QM PNVVTYN+L+ G C
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
+A +L +MM R ++ +V+TF ++D K K+ EA L ++MIQ V PD F
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF------ 294
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
YG LI+GLC G L AR++ + R G PN V Y IH C ++++ +F +M
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
KGV N + +T L+ + E+ M R P ++++D L N
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 117/221 (52%), Gaps = 6/221 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TY ++I+GLC G +D+A+++F M+ PN V Y +LIHGFC + + +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM +G+ ++ +T+ V++ C + D A + + M PD I Y L
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD------IRTYNVL 404
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DGLC GK++ A + + + + + N+VTY I I +C +++ A DLF + KG+
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASI 234
PN + +TT++ F R+ + L + M + +P S+
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN V Y T+I G CK V+ ++F +M + + N +TY LI G+C + A+
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M R D+ T+NV++D LC N K+++A + + M + + +INIV Y
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM------DINIVTYT 437
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I G+CK+GK+++A +L SL G+ PNV+TY I C + +A LF M+
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 192 GVAPN 196
G PN
Sbjct: 498 GFLPN 502
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 6/228 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT+ ++++G C ++ A LF Q+ PNVVTY +LI C N A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF +M G + +VVT+N ++ LC+ + +A LL M++ + P N++ +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP------NVITFTA 263
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LID K+GKL A+EL + + + P+V TY I+ LC +D+A +F ME G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
PN VI+TTL+ F + +++ M ++ V+ ++++
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ + + ++ + K D LF QM+ I P + T N ++H C ++ A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+MM G + D+VTF +++ C ++++A L D ++ G +P N+V Y L
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP------NVVTYTTL 194
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I LCK L +A EL + G PNVVTYN + LC + A L DM + +
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN + FT L+ +F++ + + EL M + +V P
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 8/228 (3%)
Query: 18 TYNTII-DGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIE 76
+Y I+ +GL F D A +LF +M P+++ + L+ N + LF +
Sbjct: 50 SYRKILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 77 MMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDG 136
M G+ + T N++M +C + + A+ L M++ G PD +V + L++G
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPD------LVTFTSLLNG 162
Query: 137 LCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPN 196
C ++++A L + G PNVVTY I LC + ++ A +LF M G PN
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 197 CVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
V + L+ LLR M KR + P + ++D VK
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTY 54
KPN +TY T+I G C+ G + +A LF +MK++ PN Y
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 6/170 (3%)
Query: 88 TFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNAR 147
++ I+ N + ++A L M+ P +I+ + L+ + K+ +
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLP------SIIDFTRLLSVIAKMNRYDVVI 103
Query: 148 ELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSF 207
L + + G+ P + T NI +H +C Q +A M G P+ V FT+L+ +
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 208 IRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFNR 257
N I L + P + ++ L KN +++ FN+
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 138/243 (56%), Gaps = 8/243 (3%)
Query: 6 REFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAN 65
RE GV C N VTYNT+I GLC+E +++A ++ QMK + INPN++TYN+LI GFC
Sbjct: 295 RERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 66 DGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEI 125
+A L ++ RGL +VT+N+++ C+ A +++ M + G++P
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK---- 408
Query: 126 NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLF 185
V Y LID + ++ A +L S+ GL+P+V TY++ IH C QM++A LF
Sbjct: 409 --VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 186 LDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
M K PN VI+ T++ + ++ + + ++LL+ M+++ + P + ++++L K
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 246 EIS 248
S
Sbjct: 527 RKS 529
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 43/268 (16%)
Query: 7 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQM------------------------ 42
EFG PN V Y T+IDG CK+G ++KAK+LF +M
Sbjct: 191 EFGF--SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 43 -----------KDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNV 91
+++ + PN+ TYN +++ C +A +F EM +RG+ ++VT+N
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 92 IMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
++ LC+ K++EA +++D M G+ P N++ Y LIDG C +GKL A L +
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINP------NLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
L GL P++VTYNI + C A + +ME +G+ P+ V +T L+ +F R +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIV 239
K I+L SM++ ++P S+++
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 6 REFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAN 65
E G+V P+ TY+ +I G C +G +++A LF M ++N PN V YN++I G+C
Sbjct: 435 EELGLV--PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 66 DGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDA 121
A L EM ++ L +V ++ +++ LCK RK EA RL++ MI G+ P
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 7/238 (2%)
Query: 22 IIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRG 81
+I G F + L + E Y +I+ + + N + F EM+D G
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124
Query: 82 LQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIG 141
FN ++ + + ++ + + +++ ++G LI G C+ G
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFN-------ENKSKVVLDVYSFGILIKGCCEAG 177
Query: 142 KLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFT 201
+++ + +L LT G PNVV Y I C +++KA DLF +M G+ N +T
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 202 TLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFNRQK 259
L+ + + E+ M + V P + +++ L K+ + ++ F+ +
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+PN V YNT+I G CKEG +A +L +M+++ + PNV +Y +I C EAE
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 72 YLFIEMMDRGLQSDVVTFNVI 92
L +M+D G+ ++I
Sbjct: 534 RLVEKMIDSGIDPSTSILSLI 554
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTYNT+I G CK VD+ ELF +M + N VTY +LIHGF A + + A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ D++T+++++D LC N K++ A + + + + + PD I Y
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD------IYTYN 505
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+++ +L SL+ G+ PNVVTY + C ++A LF +M+ +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G P+ + TL+ + +R + + EL+R M + AS + ++ ++L
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P V YNTIID LC V+ A LF +M ++ I PNVVTYNSLI C ++A
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M++R + +VVTF+ ++D K K+ EA +L D MI+ + PD F Y
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF------TYSS 366
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C +L A+ + + + PNVVTYN I C +++D+ +LF +M +G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN---EISL 249
+ N V +TTL+ F + E + + M V+P SI++D L N E +L
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 250 NSIPQFNRQK 259
R K
Sbjct: 487 VVFEYLQRSK 496
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 126/228 (55%), Gaps = 10/228 (4%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+P+ VTY +++GLCK G +D A L +M+ I P VV YN++I C + N+A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM ++G++ +VVT+N ++ LC + +A+RLL MI+ + P N+V +
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP------NVVTFS 330
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LID K GKL A +L + + + P++ TY+ I+ C +++D+A +F M K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKR----NVMPYASIL 235
PN V + TL+ F + + +EL R M +R N + Y +++
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 123/230 (53%), Gaps = 6/230 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N TY+ +I+ C+ + A + +M P++VT NSL++GFC+ N ++A L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+M++ G Q D TFN ++ L ++ + EA L+D M+ G +PD +V YG ++
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD------LVTYGIVV 228
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
+GLCK G + A L + + + + P VV YN I ALCN + ++ A +LF +M+ KG+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
PN V + +L+ S LL M +R + P S ++D VK
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 10/227 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT N++++G C + A L QM + P+ T+N+LIHG N +EA
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ +G Q D+VT+ ++++ LCK +D A LL M QG + P +V Y
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP------GVVIYNT 261
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID LC + +A L + G+ PNVVTYN I LCN + A L DM +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASIL 235
+ PN V F+ L+ +F+++ + + +L M KR++ P Y+S++
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN VTY T++ G C++G ++A LF +MK+E P+ TYN+LI D +
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L EM D T ++ + L R
Sbjct: 593 LIREMRSCRFVGDASTIGLVTNMLHDGR 620
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 150 bits (379), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 125/226 (55%), Gaps = 6/226 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TY+++I+G C +D+AK +F M ++ PNVVTY++LI GFC A E L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM RGL + VT+ ++ + R D A + M+ GV P NI+ Y L
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP------NILTYNIL 474
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DGLCK GKL A + + L R+ + P++ TYNI I +C +++ +LF ++ +KGV
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
+PN + + T++ F RK + LL+ M + +P + + ++
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 128/231 (55%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTY+T+I G CK V++ ELF +M + N VTY +LIHGF A D + A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ +++T+N+++D LCKN K+ +A + + + + + PD I Y
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD------IYTYN 507
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+++ EL +L+ G+ PNV+ YN I C ++A L M+
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G PN + TL+ + +R + EL++ M AS + ++ ++L
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 127/228 (55%), Gaps = 10/228 (4%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+P+ VTY T+++GLCK G +D A L +M+ I +VV YN++I G C ++A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM ++G++ DV T++ ++ LC + +A+RLL MI+ + P N+V +
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP------NVVTFS 332
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LID K GKL A +L + + + P++ TY+ I+ C +++D+A +F M K
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKR----NVMPYASIL 235
PN V ++TL+ F + + +EL R M +R N + Y +++
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Score = 140 bits (354), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 125/233 (53%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ + V YNTIIDGLCK +D A LF +M ++ I P+V TY+SLI C ++A
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M++R + +VVTF+ ++D K K+ EA +L D MI+ + PD F Y
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF------TYSS 368
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C +L A+ + + + PNVVTY+ I C +++++ +LF +M +G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ N V +TTL+ F + + + + M V P +I++D L KN
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 10/227 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT +++++G C + A L QM + P+ T+ +LIHG N +EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+ RG Q D+VT+ +++ LCK +D A LL M +G + D +V Y
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD------VVIYNT 263
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+IDGLCK + +A L + G+ P+V TY+ I LCN + A L DM +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASIL 235
+ PN V F+ L+ +F+++ + + +L M KR++ P Y+S++
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 6/227 (2%)
Query: 18 TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEM 77
TY+ I+ C+ + A + +M P++VT +SL++G+C++ ++A L +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 78 MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGL 137
++ G + D TF ++ L + K EA L+D M+Q G +PD +V YG +++GL
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD------LVTYGTVVNGL 233
Query: 138 CKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNC 197
CK G + A L + + + + +VV YN I LC + MD A +LF +M+ KG+ P+
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 198 VIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+++L+ S LL M +R + P S ++D VK
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN + YNT+I G C++G ++A L +MK++ PN TYN+LI D + L
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNR 100
EM G D T ++ + L R
Sbjct: 596 IKEMRSCGFAGDASTIGLVTNMLHDGR 622
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 130/233 (55%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
K + V Y+ IIDGLCK+G +D A LF +M+ + +++TYN+LI GFC A ++
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+ R + +VVTF+V++D K K+ EA +LL M+Q G+ P N + Y
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP------NTITYNS 373
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LIDG CK +L+ A ++ + G P+++T+NI I+ C ++D +LF +M ++G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
V N V + TL+ F + + +L + M R V P I++D L N
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 125/232 (53%), Gaps = 6/232 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+TV +NT+++GLC E V +A EL +M + P ++T N+L++G C ++A
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M++ G Q + VT+ +++ +CK+ + A LL M + ++ DA V Y
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA------VKYSI 268
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+IDGLCK G L NA L + G +++TYN I CN + D L DM +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
++PN V F+ L+ SF+++ + + +LL+ M +R + P + ++D K
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 126/236 (53%), Gaps = 6/236 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ +T+N +I+G CK +D ELF +M + N VTYN+L+ GFC + A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM+ R ++ D+V++ +++D LC N ++++A L I G + E++I Y
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA-----LEIFGKIEKSKM-ELDIGIYM 512
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I G+C K+ +A +L SL G+ + YNI I LC + + KA LF M +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEI 247
G AP+ + + L+ + + ++ + EL+ M S + +++++L E+
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN VTY +++ +CK G A EL +M++ NI + V Y+ +I G C + A
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF EM +G ++D++T+N ++ C + D+ +LL MI+ + P N+V +
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP------NVVTFSV 338
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LID K GKL+ A +L + + + G+ PN +TYN I C + ++++A + M KG
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
P+ + F L+ + + N +EL R M R V+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 29/260 (11%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P + +N + + K + L QM+ + I ++ T + +I+ FC + A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRP---------DAFC- 123
++M G + D V FN +++ LC ++ EA L+D M++ G +P + C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 124 -------------------EINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVT 164
+ N V YG +++ +CK G+ A EL + + + + V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 165 YNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMD 224
Y+I I LC D +D A +LF +ME+KG + + + TL+ F +LLR M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 225 KRNVMPYASILSIIVDLLVK 244
KR + P S+++D VK
Sbjct: 326 KRKISPNVVTFSVLIDSFVK 345
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 6/225 (2%)
Query: 32 VDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNV 91
D A +LF M P V+ +N L L +M +G+ + T ++
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 92 IMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
+++ C+ RK+ A + +++ G PD V + L++GLC ++ A EL
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDT------VIFNTLLNGLCLECRVSEALELVD 182
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
+ G P ++T N ++ LC + ++ A L M G PN V + ++ +
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFN 256
+T+ +ELLR M++RN+ A SII+D L K+ N+ FN
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 147 bits (371), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 130/231 (56%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ VTYNT+I G CK V+ ELF +M + + VTY +LI G + D + A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ D++T+++++D LC N K+++A + D M + ++ D I Y
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD------IYIYT 509
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+ + +L SL+ G+ PNVVTYN I LC+ + +A+ L M+
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G PN + TL+ + +R + + EL+R M + AS + ++ ++L
Sbjct: 570 GPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ + V +NTIID LCK VD A LF +M+ + I PNVVTY+SLI C ++A
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+++ + ++VTFN ++D K K EA +L D MI+ + PD F Y
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF------TYNS 370
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
L++G C +L A+++ + + P+VVTYN I C ++++ +LF +M +G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ + V +TTL+ + ++ + M V P SI++D L N
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN VTY+++I LC G A +L M ++ INPN+VT+N+LI F EAE
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L+ +M+ R + D+ T+N +++ C + ++D+A ++ + M+ PD +V Y
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD------VVTYNT 405
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI G CK ++++ EL + ++ GL+ + VTY I L +D D A +F M G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNV 228
V P+ + ++ L+ + K +E+ M K +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 119/227 (52%), Gaps = 6/227 (2%)
Query: 18 TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEM 77
TYN +I+ C+ + A L +M P++VT +SL++G+C+ ++A L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 78 MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGL 137
++ G + D +TF ++ L + K EA L+D M+Q G +P N+V YG +++GL
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP------NLVTYGVVVNGL 235
Query: 138 CKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNC 197
CK G A L + A + +VV +N I +LC +D A +LF +ME KG+ PN
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 198 VIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
V +++L+ S +LL M ++ + P + ++D VK
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT +++++G C + A L QM + P+ +T+ +LIHG N +EA
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ RG Q ++VT+ V+++ LCK D A LL+ M + E ++V +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI------EADVVIFNT 265
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID LCK + +A L + + G+ PNVVTY+ I LC+ + A L DM K
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+ PN V F L+ +F+++ + + +L M KR++ P
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+T+T+ T+I GL +A L +M PN+VTY +++G C D + A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M +++DVV FN I+D LCK R +D+A L M G+RP N+V Y
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP------NVVTYSS 300
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI LC G+ +A +L + + PN+VT+N I A + + +A L+ DM +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+ P+ + +L+ F + K ++ M ++ P
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN VTYNT+I GLC + + +A L +MK++ PN TYN+LI D +
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L EM D T ++ + L R
Sbjct: 597 LIREMRSCRFVGDASTIGLVANMLHDGR 624
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEI-- 125
++A LF M+ +V FN ++ + K +K D L + M + EI
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQR--------LEIVH 118
Query: 126 NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLF 185
+ Y LI+ C+ ++ A L + + G P++VT + ++ C+ +++ A L
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 186 LDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK- 244
M G P+ + FTTL+ N+ S+ + L+ M +R P ++V+ L K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 245 --NEISLNSIPQFNRQK 259
+++LN + + K
Sbjct: 239 GDTDLALNLLNKMEAAK 255
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 129/231 (55%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ VTYNT+I+G CK V ELF M + N VTY +LIHGF A+D + A+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ +++T+N ++D LCKN K+++A + + + + + PD I Y
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD------IYTYN 489
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+ +G+CK GK+++ +L SL+ G+ P+V+ YN I C ++A+ LF+ M+
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G P+ + TL+ + +R + + EL++ M AS ++ D+L
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 41/252 (16%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN VT+N++ID KEG + +A++LF +M +I+PN+VTYNSLI+GFC + +EA+ +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKM------------------------------- 102
F M+ + DVVT+N +++ CK +K+
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 103 ----DEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGL 158
D A + M+ GV P NI+ Y L+DGLCK GKL+ A + + L ++ +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHP------NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 159 MPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIE 218
P++ TYNI +C +++ DLF + +KGV P+ + + T++ F +K +
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 219 LLRSMDKRNVMP 230
L M + +P
Sbjct: 542 LFIKMKEDGPLP 553
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ + V Y+T+ID LCK VD A LF +M ++ I P+V TY+SLI C ++A
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M++R + +VVTFN ++D K K+ EA +L D MIQ + P NIV Y
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP------NIVTYNS 350
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C +L A+++ + +P+VVTYN I+ C +++ +LF DM +G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ N V +TTL+ F + ++ + + M V P + ++D L KN
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ TY+++I LC G A L M + INPNVVT+NSLI F EAE
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF EM+ R + ++VT+N +++ C + ++DEA ++ LM+ PD +V Y
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD------VVTYNT 385
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G CK K+ + EL + ++R GL+ N VTY IH D A +F M G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
V PN + + TL+ + + K + + + K + P
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N TYN +I+ LC+ + A + +M P++VT NSL++GFC+ N +EA L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+M++ G Q D VTF ++ L ++ K EA L++ M+ G +PD +V YG +I
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD------LVTYGAVI 212
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
+GLCK G+ A L + + + +VV Y+ I +LC +D A +LF +M+ KG+
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
P+ +++L+ S LL M +R + P + ++D K
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 33/256 (12%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+TVT+ T++ GL + +A L +M + P++VTY ++I+G C + + A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAF---------C 123
L +M +++DVV ++ ++D LCK R +D+A L M G+RPD F C
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 124 EI--------------------NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVV 163
N+V + LID K GKL A +L + + + PN+V
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 164 TYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSM 223
TYN I+ C +++D+A +F M K P+ V + TL+ F + + +EL R M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 224 DKR----NVMPYASIL 235
+R N + Y +++
Sbjct: 407 SRRGLVGNTVTYTTLI 422
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ VT N++++G C + +A L QM + P+ VT+ +L+HG N +EA L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
M+ +G Q D+VT+ +++ LCK + D A LL+ M +G + D +V Y +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD------VVIYSTV 246
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
ID LCK + +A L + G+ P+V TY+ I LCN + A L DM + +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN V F +L+ +F ++ + + +L M +R++ P
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
+EA LF EM+ +V F+ ++ + K +K D + M GV N+
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSH------NL 100
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
Y +I+ LC+ +L A + + + G P++VT N ++ C+ ++ +A L
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN-- 245
M G P+ V FTTL+ + N+ S+ + L+ M + P +++ L K
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 246 -EISLNSIPQFNRQK 259
+++LN + + + K
Sbjct: 221 PDLALNLLNKMEKGK 235
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ + YNT+I G CK+G ++A LF++MK++ P+ TYN+LI D +
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L EM D T+ ++ D L R
Sbjct: 577 LIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 10/182 (5%)
Query: 80 RGLQSDVVTFNVIMDELCKNR----KMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLID 135
RG+ ++++ ++L +N K+DEA L M++ P +IV + L+
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFP------SIVEFSKLLS 73
Query: 136 GLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAP 195
+ K+ K + + G+ N+ TYNI I+ LC Q+ A + M G P
Sbjct: 74 AIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP 133
Query: 196 NCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQF 255
+ V +L+ F N S+ + L+ M + P + +V L ++ + ++
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 256 NR 257
R
Sbjct: 194 ER 195
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGN 68
G+ KPN V YNTIIDGLCK VD A +L +M+ + I P+VVTYNSLI G C + +
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
+A + M R + DV TFN ++D K ++ EA + MI+ + PD IV
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD------IV 292
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
Y LI GLC +L A E+ + G P+VVTY+I I+ C ++++ LF +M
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+GV N V +T L+ + R + + E+ R M V P
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 6/227 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT+ ++++G C+ V A +F QM PNVV YN++I G C + + A
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M G+ DVVT+N ++ LC + + +ATR++ M + + PD F +
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF------TFNA 261
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LID K G++ A E + + R L P++VTY++ I+ LC ++D+A ++F M KG
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
P+ V ++ L+ + + + ++L M +R V+ +I++
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ VTY+ +I+G CK V+ +LF +M + N VTY LI G+C A N AE
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F M+ G+ +++T+NV++ LC N K+++A +L M + G+ D IV Y
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD------IVTYN 435
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I G+CK G++ +A ++ SL GLMP++ TY + L +A LF M+
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Query: 192 GVAPN 196
G+ PN
Sbjct: 496 GILPN 500
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ ++ ++ + K D L+ QM+ I N+ T N L++ FC + + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M+ G + +VTF +++ C+ ++ +A + D M+ G +P N+V Y +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP------NVVIYNTI 192
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
IDGLCK ++ NA +L + + G+ P+VVTYN I LC+ + A + M + +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
P+ F L+ + +++ S+ E M +R++ P S+++
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 6/213 (2%)
Query: 32 VDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNV 91
+D + +LF M P++ ++ L+ + YL+ +M G+ ++ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 92 IMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
+++ C+ ++ A L MI+ G P +IV +G L++G C+ ++ +A +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEP------SIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
+ G PNVV YN I LC +Q+D A DL ME G+ P+ V + +L+
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
S ++ M KR + P + ++D VK
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 21/202 (10%)
Query: 58 IHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGV 117
I GFC++ + EM+ G+ + K+D++ L M+Q
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGI---------------RFMKLDDSLDLFFHMVQCRP 77
Query: 118 RPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQ 177
P +I + L+ + K+ K L + + G+ N+ T NI ++ C Q
Sbjct: 78 LP------SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 178 MDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSI 237
+ A M G P+ V F +L+ F R + + + M P I +
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 238 IVDLLVKNEISLNSIPQFNRQK 259
I+D L K++ N++ NR +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRME 213
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 127/245 (51%), Gaps = 6/245 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
K + V Y+ IIDGLCK G +D A LF +M+ + I N++TYN LI GFC A ++
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+ R + +VVTF+V++D K K+ EA L MI G+ PD + Y
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT------ITYTS 373
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LIDG CK L A ++ + G PN+ T+NI I+ C ++D +LF M ++G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSI 252
V + V + TL+ F + + EL + M R V P I++D L N S ++
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 253 PQFNR 257
F +
Sbjct: 494 EIFEK 498
Score = 140 bits (354), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 128/232 (55%), Gaps = 6/232 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PNT+T++T+I+GLC EG V +A EL +M + P+++T N+L++G C + EA
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M++ G Q + VT+ +++ +CK+ + A LL M + ++ DA V Y
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA------VKYSI 268
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+IDGLCK G L NA L + G+ N++TYNI I CN + D L DM +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+ PN V F+ L+ SF+++ + + EL + M R + P + ++D K
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 124/289 (42%), Gaps = 64/289 (22%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N +TYN +I G C G D +L M INPNVVT++ LI F EAE L
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD---------AFCEI 125
EM+ RG+ D +T+ ++D CK +D+A +++DLM+ G P+ +C+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 126 N--------------------IVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVT- 164
N V Y LI G C++GKL A+EL Q + + PN+VT
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 165 ----------------------------------YNITIHALCNDEQMDKAHDLFLDMEV 190
YNI IH +CN ++D A DLF + +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 191 KGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
KGV P + ++ +K S+ L R M++ P +I++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 125/231 (54%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN T+N +I+G CK +D ELF +M + + VTYN+LI GFC N A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM+ R + ++VT+ +++D LC N + ++A + + + + + E++I Y
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM------ELDIGIYN 512
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I G+C K+ +A +L SL G+ P V TYNI I LC + +A LF ME
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G AP+ + L+ + + + +K ++L+ + + AS + +++D+L
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 29/260 (11%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P + ++ + + K D L QM+ + I N+ T + +I+ FC A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAF----------- 122
+++ G + + +TF+ +++ LC ++ EA L+D M++ G +PD
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 123 ------------------CEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVT 164
C+ N V YG +++ +CK G+ A EL + + + + V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 165 YNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMD 224
Y+I I LC +D A +LF +ME+KG+ N + + L+ F +LLR M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 225 KRNVMPYASILSIIVDLLVK 244
KR + P S+++D VK
Sbjct: 326 KRKINPNVVTFSVLIDSFVK 345
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 6/225 (2%)
Query: 32 VDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNV 91
D A +LF M P V+ ++ L + L +M +G+ ++ T ++
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 92 IMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
+++ C+ RK+ A + +I+ G P N + + LI+GLC G++ A EL
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEP------NTITFSTLINGLCLEGRVSEALELVD 182
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
+ G P+++T N ++ LC + +A L M G PN V + ++ +
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFN 256
+T+ +ELLR M++RN+ A SII+D L K+ N+ FN
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 287
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP TYN +I GLCK+G + +A+ LF +M+++ P+ TYN LI D ++
Sbjct: 540 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L E+ G D T +++D L R
Sbjct: 600 LIEELKRCGFSVDASTIKMVIDMLSDGR 627
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 121 AFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDK 180
AF + N+ L GL I K +A +L + + + +P V+ ++ A+ +Q D
Sbjct: 48 AFSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 181 AHDLFLDMEVKGVAPNCVIFTTLMPSFIR 209
L ME+KG+A N + ++ F R
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCR 135
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 127/226 (56%), Gaps = 6/226 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+TVTY ++IDG CKE +DKA + M + PN+ T+N LI+G+C AN ++ L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F +M RG+ +D VT+N ++ C+ K++ A L M+ VRPD IV+Y L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD------IVSYKIL 463
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DGLC G+ + A E+ + + ++ + ++ YNI IH +CN ++D A DLF + +KGV
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
P+ + ++ +K S+ L R M++ P +I++
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 119/233 (51%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
K + V Y+ IIDGLCK+G +D A LF +M+ + +++ Y +LI GFCYA ++
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+ R + DVV F+ ++D K K+ EA L MIQ G+ PD V Y
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT------VTYTS 357
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LIDG CK +L A + + G PN+ T+NI I+ C +D +LF M ++G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
V + V + TL+ F + EL + M R V P I++D L N
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 126/231 (54%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN T+N +I+G CK +D ELF +M + + VTYN+LI GFC A+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM+ R ++ D+V++ +++D LC N + ++A + + + + + E++I Y
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM------ELDIGIYN 496
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I G+C K+ +A +L SL G+ P+V TYNI I LC + +A LF ME
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G +PN + L+ + + + + +K +L+ + + AS + ++VD+L
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 6/232 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+TVT++T+I+GLC EG V +A EL +M + P ++T N+L++G C ++A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M++ G Q + VT+ ++ +CK+ + A LL M + ++ DA V Y
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA------VKYSI 252
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+IDGLCK G L NA L + G +++ Y I C + D L DM +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+ P+ V F+ L+ F+++ + + EL + M +R + P + ++D K
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 122/245 (49%), Gaps = 6/245 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP +T N +++GLC G V A L +M + PN VTY ++ C + A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M +R ++ D V +++I+D LCK+ +D A L + M G + D I+ Y
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD------IIIYTT 287
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI G C G+ + +L + + + + P+VV ++ I + ++ +A +L +M +G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSI 252
++P+ V +T+L+ F ++N+ K +L M + P +I+++ K + + +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 253 PQFNR 257
F +
Sbjct: 408 ELFRK 412
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 6/224 (2%)
Query: 33 DKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVI 92
D A +LF +M P ++ ++ L + L +M +G+ ++ T +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 93 MDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQS 152
++ C+ RK+ A + +I+ G PD V + LI+GLC G++ A EL
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDT------VTFSTLINGLCLEGRVSEALELVDR 167
Query: 153 LTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNE 212
+ G P ++T N ++ LC + ++ A L M G PN V + ++ + +
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 213 TSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFN 256
T+ +ELLR M++R + A SII+D L K+ N+ FN
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ TYN +I GLCK+G + +A LF +M+++ +PN TYN LI D ++
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L E+ G D T +++D L R
Sbjct: 584 LIEEIKRCGFSVDASTVKMVVDMLSDGR 611
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 44/101 (43%)
Query: 142 KLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFT 201
K +A +L Q +TR+ P ++ ++ + +Q D DL ME+KG+A N +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 202 TLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
++ R + S + + K P S +++ L
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 130/233 (55%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ N V Y+T+ID LCK D A LF +M+++ + PNV+TY+SLI C ++A
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M++R + ++VTF+ ++D K K+ +A +L + MI+ + P NI Y
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP------NIFTYSS 363
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C + +L A+++ + + R +PNVVTYN I+ C +++DK +LF +M +G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ N V +TTL+ F + + + + M V P +I++D L KN
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 10/227 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT N++++G C + A L QM + P+ VT+ +LIHG N +EA
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ RG Q D+VT+ +++ LCK D A LL+ M + E N+V Y
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI------EANVVIYST 258
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID LCK +A L + G+ PNV+TY+ I LCN + A L DM +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASIL 235
+ PN V F+ L+ +F++K + K +L M KR++ P Y+S++
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N TYN +I+ C+ + A L +M P++VT NSL++GFC+ N ++A L
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+M++ G + D VTF ++ L + K EA L+D M+Q G +PD +V YG ++
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPD------LVTYGAVV 225
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
+GLCK G A L + A + NVV Y+ I +LC D A +LF +ME KGV
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
PN + +++L+ S LL M +R + P S ++D VK
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTYNT+I+G CK VDK ELF +M + N VTY +LIHGF A D + A+
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ +++T+N+++D LCKN K+ +A + + + + + PD I Y
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD------IYTYN 502
Query: 132 CLIDGLCKIGKLK 144
+I+G+CK GK K
Sbjct: 503 IMIEGMCKAGKWK 515
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 128/231 (55%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ V YNT+I G CK V++ E+F +M + N VTY +LIHGF A D + A+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ D++T+N+++D LC N ++ A + + M + ++ D IV Y
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD------IVTYT 465
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+ LCK GK+++ +L SL+ G+ PNVVTY + C ++A LF++M+
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G PN + TL+ + +R + + EL++ M AS ++ ++L
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 117/230 (50%), Gaps = 6/230 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N TY+ I+ C+ + A + +M P++VT NSL++GFC+ N +EA L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+M++ G Q D VTF ++ L ++ K EA L++ M+ G +PD +V YG +I
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD------LVTYGAVI 222
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
+GLCK G+ A L + + + +VV YN I LC + MD A DLF ME KG+
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
P+ + L+ S LL M ++N+ P + ++D VK
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 124/235 (52%), Gaps = 7/235 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+P+ VTY +I+GLCK G D A L +M+ I +VV YN++I G C ++A
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF +M +G++ DV T+N ++ LC + +A+RLL M++ + PD +V +
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD------LVFFN 324
Query: 132 CLIDGLCKIGKLKNARELSQSLTRA-GLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEV 190
LID K GKL A +L + ++ P+VV YN I C +++++ ++F +M
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 191 KGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+G+ N V +TTL+ F + + + + M V P +I++D L N
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ + V YNTIIDGLCK +D A +LF +M+ + I P+V TYN LI C ++A
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+++ + D+V FN ++D K K+ EA +L D M++ C ++VAY
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK-----SKHCFPDVVAYNT 361
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI G CK +++ E+ + +++ GL+ N VTY IH D A +F M G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNV 228
V P+ + + L+ + + M KR++
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 6/212 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ VT N++++G C + +A L QM + P+ VT+ +L+HG N +EA L
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
M+ +G Q D+VT+ +++ LCK + D A LL+ M +G + D +V Y +
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD------VVIYNTI 256
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
IDGLCK + +A +L + G+ P+V TYN I LCN + A L DM K +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDK 225
P+ V F L+ +F+++ + + +L M K
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 6/228 (2%)
Query: 32 VDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNV 91
+D A LF M P++V ++ L+ N + L +M + G+ ++ T+++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 92 IMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
++ C+ ++ A +L M++ G P +IV L++G C ++ A L
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGP------SIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
+ G P+ VT+ +H L + +A L M VKG P+ V + ++ ++
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFNRQK 259
E + LL M+K + I + I+D L K + ++ FN+ +
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN VTY T++ G C++G ++A LF++MK++ PN TYN+LI D +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L EM G D TF ++ + L R
Sbjct: 553 LIKEMRSCGFAGDASTFGLVTNMLHDGR 580
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 124/224 (55%), Gaps = 7/224 (3%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ V YNTIIDG CK G V+ A ELF +M+ + + + VTYNSL+ G C + ++A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+ R + +V+TF ++D K K EA +L + M + V PD F Y
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF------TYNS 284
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+GLC G++ A+++ + G +P+VVTYN I+ C +++D+ LF +M +G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKR-NVMPYASIL 235
+ + + + T++ + + E+ MD R N+ Y+ +L
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 130/243 (53%), Gaps = 26/243 (10%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN +T+ +ID KEG +A +L+ +M ++P+V TYNSLI+G C +EA+ +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGV---------------- 117
M+ +G DVVT+N +++ CK++++DE T+L M Q G+
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 118 --RPDAFCEI--------NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNI 167
RPDA EI NI Y L+ GLC +++ A L +++ ++ + ++ TYNI
Sbjct: 362 AGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 168 TIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRN 227
IH +C ++ A DLF + KG+ P+ V +TT++ F RK + K L R M +
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 228 VMP 230
++P
Sbjct: 482 LLP 484
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 106/184 (57%), Gaps = 9/184 (4%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ VTYNT+I+G CK VD+ +LF +M + + +TYN++I G+ A + A+
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F M R ++ T+++++ LC N ++++A L + M + + E++I Y
Sbjct: 370 EIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI------ELDITTYN 420
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I G+CKIG +++A +L +SL+ GL P+VV+Y I C Q DK+ L+ M+
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 192 GVAP 195
G+ P
Sbjct: 481 GLLP 484
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 124/242 (51%), Gaps = 20/242 (8%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT +++I+G C+ V A +L +M++ P+VV YN++I G C N+A
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF M G+++D VT+N ++ LC + + +A RL+ M+ + P N++ +
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP------NVITFTA 249
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID K GK A +L + +TR + P+V TYN I+ LC ++D+A + M KG
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSI 252
P+ V + TL+ F + + +L R M +R LV + I+ N+I
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG--------------LVGDTITYNTI 355
Query: 253 PQ 254
Q
Sbjct: 356 IQ 357
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 37 ELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDEL 96
+LF +M P++V ++ ++ + + + LF M G+ D+ ++N++++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 97 CKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRA 156
C+ + A ++ M++ G PD +V LI+G C+ ++ +A +L +
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPD------VVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 157 GLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKV 216
G P+VV YN I C ++ A +LF ME GV + V + +L+ S
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 217 IELLRSMDKRNVMPYASILSIIVDLLVK 244
L+R M R+++P + ++D+ VK
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 137 LCKIGKLKNAR---ELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
L KI K KN L + G+ ++ +YNI I+ LC + A + M G
Sbjct: 76 LSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGY 135
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIP 253
P+ V ++L+ F + N I+L+ M++ P I + I+D K + +++
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 254 QFNRQK 259
F+R +
Sbjct: 196 LFDRME 201
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 6/227 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
K + VTY+++I GLC +G D ++ +M NI P+VVT+++LI F EA+
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L+ EM+ RG+ D +T+N ++D CK + EA ++ DLM+ G PD IV Y
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD------IVTYSI 390
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+ CK ++ + L + ++ GL+PN +TYN + C +++ A +LF +M +G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
V P+ V + L+ E +K +E+ M K + I +II+
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 124/233 (53%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
K + V Y+ +ID LCK+G D A LF +M+ + I +VVTY+SLI G C ++
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+ EM+ R + DVVTF+ ++D K K+ EA L + MI G+ PD + Y
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT------ITYNS 355
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LIDG CK L A ++ + G P++VTY+I I++ C +++D LF ++ KG
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ PN + + TL+ F + + + EL + M R V P I++D L N
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 128/246 (52%), Gaps = 29/246 (11%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ VT++ +ID KEG + +AKEL+ +M I P+ +TYNSLI GFC N +EA +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD---------AFCE 124
F M+ +G + D+VT++++++ CK +++D+ RL + G+ P+ FC+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 125 I--------------------NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVT 164
++V YG L+DGLC G+L A E+ + + ++ + +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 165 YNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMD 224
YNI IH +CN ++D A LF + KGV P+ V + ++ +K S+ L R M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 225 KRNVMP 230
+ P
Sbjct: 553 EDGCTP 558
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 125/231 (54%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+P+ VTY+ +I+ CK VD LF ++ + + PN +TYN+L+ GFC + N A+
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM+ RG+ VVT+ +++D LC N ++++A + + M + + + I Y
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM------TLGIGIYN 494
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I G+C K+ +A L SL+ G+ P+VVTYN+ I LC + +A LF M+
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G P+ + L+ + + + +EL+ M +S + +++D+L
Sbjct: 555 GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 121/224 (54%), Gaps = 8/224 (3%)
Query: 7 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAND 66
E+G +P+ VTY +++ LCK G A +LF +M++ NI +VV Y+ +I C
Sbjct: 203 EYGF--QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 67 GNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEIN 126
++A LF EM +G+++DVVT++ ++ LC + K D+ ++L MI + PD
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD------ 314
Query: 127 IVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFL 186
+V + LID K GKL A+EL + G+ P+ +TYN I C + + +A+ +F
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 187 DMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
M KG P+ V ++ L+ S+ + + L R + + ++P
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 6/226 (2%)
Query: 5 NREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA 64
R + + +P+T+T++T+++G C EG V +A L +M + P++VT ++LI+G C
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 65 NDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCE 124
+EA L M++ G Q D VT+ +++ LCK+ A L M + ++
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA----- 243
Query: 125 INIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDL 184
++V Y +ID LCK G +A L + G+ +VVTY+ I LCND + D +
Sbjct: 244 -SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 185 FLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+M + + P+ V F+ L+ F+++ + + EL M R + P
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 126/228 (55%), Gaps = 6/228 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT +T+I+GLC +G V +A L +M + P+ VTY +++ C + + A
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF +M +R +++ VV +++++D LCK+ D+A L + M G++ D +V Y
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD------VVTYSS 285
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI GLC GK + ++ + + ++P+VVT++ I + ++ +A +L+ +M +G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
+AP+ + + +L+ F ++N + ++ M + P SI+++
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 112/208 (53%), Gaps = 6/208 (2%)
Query: 49 PNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRL 108
P+ +T+++L++GFC +EA L M++ + D+VT + +++ LC ++ EA L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 109 LDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNIT 168
+D M++ G +PD V YG +++ LCK G A +L + + + +VV Y+I
Sbjct: 198 IDRMVEYGFQPDE------VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 169 IHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNV 228
I +LC D D A LF +ME+KG+ + V +++L+ + ++LR M RN+
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 229 MPYASILSIIVDLLVKNEISLNSIPQFN 256
+P S ++D+ VK L + +N
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYN 339
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ VTY ++DGLC G ++KA E+F +M+ + + YN +IHG C A+ ++A L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F + D+G++ DVVT+NV++ LCK + EA L M + G PD F Y L
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF------TYNIL 566
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
I L ++ EL + + G + T + I L +D ++DK+ FLDM
Sbjct: 567 IRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKS---FLDM 617
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 103/240 (42%), Gaps = 30/240 (12%)
Query: 32 VDKAKELFLQMKDENINPNVVTYN------------SLIHGFCYANDGNEAEYLFIEMMD 79
V+ A +LF M P + +N L+ GFC + N
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN----------- 99
Query: 80 RGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCK 139
G++ D+ T ++++ C+ +K+ A +L + G PD + + L++G C
Sbjct: 100 -GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDT------ITFSTLVNGFCL 152
Query: 140 IGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVI 199
G++ A L + P++VT + I+ LC ++ +A L M G P+ V
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212
Query: 200 FTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFNRQK 259
+ ++ + ++ ++L R M++RN+ SI++D L K+ +++ FN +
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ VTYN +I GLCK+G + +A LF +MK++ P+ TYN LI + +
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLM 112
L EM G +D T +++D L +R++D++ LD++
Sbjct: 582 LIEEMKVCGFSADSSTIKMVIDML-SDRRLDKS--FLDML 618
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 116/218 (53%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN V YNT+IDGLCK G ++ A EL +M+ + + +VVTYN+L+ G CY+ ++A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+ +MM R + DVVTF ++D K +DEA L MIQ V P N V Y
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP------NNVTYNS 286
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+I+GLC G+L +A++ + G PNVVTYN I C +D+ LF M +G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+ + TL+ + + + +++ M R V P
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN VTYN+II+GLC G + AK+ F M + PNVVTYN+LI GFC +E L
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F M G +D+ T+N ++ C+ K+ A + M+ V PD I+ + L
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD------IITHCIL 392
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+ GLC G++++A + + +V YNI IH LC ++++KA +LF + V+GV
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV 452
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVM 229
P+ +T ++ + + EL+R M + ++
Sbjct: 453 KPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT+ +++ G C + A L + M PNVV YN+LI G C + N A
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L EM +GL +DVVT+N ++ LC + + +A R+L M++ + PD +V +
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD------VVTFTA 251
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LID K G L A+EL + + ++ + PN VTYN I+ LC ++ A F M KG
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMD 224
PN V + TL+ F + + ++L + M
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTYNT+I G CK VD+ +LF +M E N ++ TYN+LIHG+C A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F M+ R + D++T +++ LC N +++ A D M ++ I IVAY
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM------RESEKYIGIVAYN 425
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I GLCK K++ A EL L G+ P+ TY I I LC + +A +L M+ +
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 192 GV 193
G+
Sbjct: 486 GI 487
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 10/223 (4%)
Query: 18 TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEM 77
++ +I C+ + A + +M P++VT+ SL+HGFC N +A L I M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 78 MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGL 137
+ G + +VV +N ++D LCKN +++ A LL+ M + G+ D +V Y L+ GL
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD------VVTYNTLLTGL 221
Query: 138 CKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNC 197
C G+ +A + + + + + P+VVT+ I +D+A +L+ +M V PN
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 198 VIFTTLMPSFI---RKNETSKVIELLRSMD-KRNVMPYASILS 236
V + +++ R + K +L+ S NV+ Y +++S
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 6/213 (2%)
Query: 33 DKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVI 92
+ A LF +M P++V + L+ Y +M G+ D+ +F ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 93 MDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQS 152
+ C+ ++ A +L M++ G P +IV +G L+ G C + ++ +A L
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEP------SIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 153 LTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNE 212
+ ++G PNVV YN I LC + +++ A +L +ME KG+ + V + TL+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 213 TSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
S +LR M KR++ P + ++D+ VK
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 129/231 (55%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ TYNT+I G CK V+ ELF +M + + VTY +LI G + D + A+
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ G+ D++T+++++D LC N K+++A + D M + ++ D I Y
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD------IYIYT 434
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+ + +L SL+ G+ PNVVTYN I LC+ + +A+ L M+
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G P+ + TL+ + +R + + EL+R M + AS + ++ ++L
Sbjct: 495 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TYN++I+G C +DKAK++F M ++ P++ TYN+LI GFC + + L
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM RGL D VT+ ++ L + D A ++ M+ GV PD I+ Y L
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD------IMTYSIL 401
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DGLC GKL+ A E+ + ++ + ++ Y I +C ++D DLF + +KGV
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN V + T++ K + LL+ M + +P
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ + V +NTIID LCK VD A LF +M+ + I PNVVTY+SLI C ++A
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+++ + ++VTFN ++D K K EA +L D MI+ + PD F Y
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF------TYNS 295
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C +L A+++ + + P++ TYN I C ++++ +LF +M +G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ + V +TTL+ + ++ + M V P SI++D L N
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+PN VTY +++GLCK G +D A L +M+ I +VV +N++I C ++A
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM +G++ +VVT++ ++ LC + +A++LL MI+ + P N+V +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP------NLVTFN 259
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LID K GK A +L + + + P++ TYN I+ C +++DKA +F M K
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVM 229
P+ + TL+ F + EL R M R ++
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 6/230 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N TYN +I+ C+ + A L +M P++VT +SL++G+C+ ++A L
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+M++ G + D +TF ++ L + K EA L+D M+Q G +P N+V YG ++
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP------NLVTYGVVV 157
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
+GLCK G + A L + A + +VV +N I +LC +D A +LF +ME KG+
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
PN V +++L+ S +LL M ++ + P + ++D VK
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 6/216 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN VTY+++I LC G A +L M ++ INPN+VT+N+LI F EAE
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+ R + D+ T+N +++ C + ++D+A ++ + M+ PD + Y
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD------LDTYNT 330
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI G CK ++++ EL + ++ GL+ + VTY I L +D D A +F M G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNV 228
V P+ + ++ L+ + K +E+ M K +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT +++++G C + A L QM + P+ +T+ +LIHG N +EA
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ RG Q ++VT+ V+++ LCK +D A LL+ M + D +V +
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD------VVIFNT 190
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID LCK + +A L + + G+ PNVVTY+ I LC+ + A L DM K
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+ PN V F L+ +F+++ + + +L M KR++ P
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+T+T+ T+I GL +A L +M PN+VTY +++G C D + A
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M +++DVV FN I+D LCK R +D+A L M G+RP N+V Y
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP------NVVTYSS 225
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI LC G+ +A +L + + PN+VT+N I A + + +A L DM +
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+ P+ + +L+ F + K ++ M ++ P
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN VTYNT+I GLC + + +A L +MK++ P+ TYN+LI D +
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L EM D T ++ + L R
Sbjct: 522 LIREMRSCRFVGDASTIGLVANMLHDGR 549
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 8/245 (3%)
Query: 1 MANGNREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHG 60
M N E G+ KP+ V Y TIID LCK G V+ A LF QM++ I P+VV Y SL++G
Sbjct: 164 MVNQMVEMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 61 FCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD 120
C + +A+ L M R ++ DV+TFN ++D K K +A L + MI+ + P
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP- 280
Query: 121 AFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDK 180
NI Y LI+G C G + AR++ + G P+VV Y I+ C +++D
Sbjct: 281 -----NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 181 AHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
A +F +M KG+ N + +TTL+ F + + + E+ M R V P ++++
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 241 LLVKN 245
L N
Sbjct: 396 CLCYN 400
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 44/253 (17%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN TY ++I+G C EG VD+A+++F M+ + P+VV Y SLI+GFC ++A +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM +GL + +T+ ++ + K + A + M+ GV P NI Y L
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP------NIRTYNVL 393
Query: 134 IDGLCKIGKLKNARELSQSLTRA---GLMPNVVTYNITIHALCNDEQMDKAHDLFLDME- 189
+ LC GK+K A + + + + G+ PN+ TYN+ +H LC + +++KA +F DM
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 190 ----------------------------------VKGVAPNCVIFTTLMPSFIRKNETSK 215
KGV PN V +TT++ R+ +
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 216 VIELLRSMDKRNV 228
L R M + V
Sbjct: 514 AHVLFRKMKEDGV 526
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 6/213 (2%)
Query: 18 TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEM 77
T N +++ C+ A +M P++VT+ SLI+GFC N EA + +M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 78 MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGL 137
++ G++ DVV + I+D LCKN ++ A L D M G+RPD +V Y L++GL
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD------VVMYTSLVNGL 222
Query: 138 CKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNC 197
C G+ ++A L + +T+ + P+V+T+N I A + + A +L+ +M +APN
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 198 VIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+T+L+ F + + ++ M+ + P
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ V Y ++I+G CK VD A ++F +M + + N +TY +LI GF N A+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQ---GGVRPDAFCEINIV 128
+F M+ RG+ ++ T+NV++ LC N K+ +A + + M + GV P+ + N++
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW-TYNVL 431
Query: 129 AYGCLIDG------------------------------LCKIGKLKNARELSQSLTRAGL 158
+G +G +CK GK+KNA L SL G+
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 159 MPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
PNVVTY I L + +AH LF M+ GV+
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 108/217 (49%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ + + +++ + K D L ++ ++ ++ T N L++ FC ++ A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+MM G + D+VTF +++ C +M+EA +++ M++ G++PD +V Y +
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD------VVMYTTI 183
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
ID LCK G + A L + G+ P+VV Y ++ LCN + A L M + +
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
P+ + F L+ +F+++ + EL M + ++ P
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 6/224 (2%)
Query: 33 DKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVI 92
++A +LF M + P+++ + L++ + L + G+ D+ T N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 93 MDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQS 152
M+ C++ + A+ L M++ G PD IV + LI+G C +++ A +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPD------IVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 153 LTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNE 212
+ G+ P+VV Y I +LC + ++ A LF ME G+ P+ V++T+L+
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 213 TSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFN 256
LLR M KR + P + ++D VK L++ +N
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYN 271
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 127/232 (54%), Gaps = 7/232 (3%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENI-NPNVVTYNSLIHGFCYANDG 67
G C+P+ VTYNT+I G CK ++KA E+F +K ++ +P+VVTY S+I G+C A
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
EA L +M+ G+ VTFNV++D K +M A + MI G PD +
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD------V 347
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
V + LIDG C++G++ L + + G+ PN TY+I I+ALCN+ ++ KA +L
Sbjct: 348 VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ 407
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
+ K + P ++ ++ F + + ++ ++ M+K+ P +I++
Sbjct: 408 LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 6/236 (2%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGN 68
G VC P+ VTY ++I G CK G + +A L M I P VT+N L+ G+ A +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
AE + +M+ G DVVTF ++D C+ ++ + RL + M G+ P+AF
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF------ 383
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
Y LI+ LC +L AREL L ++P YN I C ++++A+ + +M
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
E K P+ + FT L+ K + + + M P +S ++ L+K
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 20 NTIIDGLCKEGFVDKAKELF-LQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMM 78
N++++ L K V+ A +LF ++ ++ N + T+N LI G C +A L M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 79 DRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLC 138
G + D+VT+N ++ CK+ ++++A+ + + G V C ++V Y +I G C
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-----CSPDVVTYTSMISGYC 288
Query: 139 KIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCV 198
K GK++ A L + R G+ P VT+N+ + +M A ++ M G P+ V
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 199 IFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
FT+L+ + R + S+ L M+ R + P A SI+++ L
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 9/220 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P VT+N ++DG K G + A+E+ +M P+VVT+ SLI G+C ++ L
Sbjct: 310 PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+ EM RG+ + T++++++ LC ++ +A LL + + P F Y +
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF------MYNPV 423
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
IDG CK GK+ A + + + + P+ +T+ I I C +M +A +F M G
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGC 483
Query: 194 APNCVIFTTLMPSFIRKN---ETSKVIELLRSMDKRNVMP 230
+P+ + ++L+ ++ E + ++ R NV+P
Sbjct: 484 SPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN TY+ +I+ LC E + KA+EL Q+ ++I P YN +I GFC A NEA +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
EM + + D +TF +++ C +M EA + M+ G PD + L
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK------ITVSSL 493
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVV-----TYNITIHA 171
+ L K G K A L+Q + R G NVV T N T+ A
Sbjct: 494 LSCLLKAGMAKEAYHLNQ-IARKGQSNNVVPLETKTANATLAA 535
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 46 NINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEA 105
NI + TYN L C A + A +F M G+ + ++ + K+ A
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 106 T-----------------RLLDLMIQGGVRPDA---------FCEIN-IVAYGCLIDGLC 138
T LL+ +++ DA F N + LI GLC
Sbjct: 158 TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 139 KIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV-APNC 197
+GK + A EL ++ G P++VTYN I C +++KA ++F D++ V +P+
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 198 VIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
V +T+++ + + + + LL M + + P +++VD K
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Score = 37.7 bits (86), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
CKP+ +T+ +I G C +G + +A +F +M +P+ +T +SL+ A EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA- 506
Query: 72 YLFIEMMDRGLQSDVV 87
Y ++ +G ++VV
Sbjct: 507 YHLNQIARKGQSNNVV 522
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 127/231 (54%), Gaps = 6/231 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ VTYNT+I G CK V++ E+F +M + N VTYN LI G A D + A+
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F EM+ G+ +++T+N ++D LCKN K+++A + + + + + P I Y
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP------TIYTYN 505
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+++ +L +L+ G+ P+VV YN I C ++A LF +M+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G PN + TL+ + +R + EL++ M AS + ++ ++L
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P + YNTIIDGLCK +D A LF +M+ + I PNVVTY+SLI C ++A
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M++R + DV TF+ ++D K K+ EA +L D M++ + P +IV Y
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP------SIVTYSS 366
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C +L A+++ + + P+VVTYN I C +++++ ++F +M +G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ N V + L+ + + E+ + M V P + ++D L KN
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 130/244 (53%), Gaps = 6/244 (2%)
Query: 1 MANGNREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHG 60
MA +R C+P+ VTY +++GLCK G D A L +M+ + P V+ YN++I G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 61 FCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD 120
C ++A LF EM +G++ +VVT++ ++ LC + +A+RLL MI+ + PD
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 121 AFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDK 180
F + LID K GKL A +L + + + P++VTY+ I+ C +++D+
Sbjct: 326 VF------TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 181 AHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
A +F M K P+ V + TL+ F + + +E+ R M +R ++ +I++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 241 LLVK 244
L +
Sbjct: 440 GLFQ 443
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 10/227 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN VT +++++G C + +A L QM PN VT+N+LIHG N +EA
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ +G Q D+VT+ V+++ LCK D A LL+ M QG + P ++ Y
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP------GVLIYNT 261
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+IDGLCK + +A L + + G+ PNVVTY+ I LCN + A L DM +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASIL 235
+ P+ F+ L+ +F+++ + + +L M KR++ P Y+S++
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 6/230 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N TY+ +I+ C+ + A + +M PN+VT +SL++G+C++ +EA L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+M G Q + VTFN ++ L + K EA L+D M+ G +PD +V YG ++
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD------LVTYGVVV 228
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
+GLCK G A L + + L P V+ YN I LC + MD A +LF +ME KG+
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
PN V +++L+ S LL M +R + P S ++D VK
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
++A LF EM+ ++ F+ ++ + K K D L + M G+ + +
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY----- 117
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
Y LI+ C+ +L A + + + G PN+VT + ++ C+ +++ +A L
Sbjct: 118 -TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
M V G PN V F TL+ N+ S+ + L+ M + P ++V+ L K
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ V YNT+I G C++G ++A LF +MK++ PN YN+LI D +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L EM G D T ++ + L R
Sbjct: 593 LIKEMRSCGFAGDASTIGLVTNMLHDGR 620
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 125/233 (53%), Gaps = 6/233 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ VTYN +++G+CKEG +D+A + M PNV+T+N ++ C +AE
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
L +M+ +G VVTFN++++ LC+ + A +L+ M Q G +P N ++Y
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP------NSLSYN 383
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
L+ G CK K+ A E + + G P++VTYN + ALC D +++ A ++ + K
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
G +P + + T++ + +T K I+LL M +++ P S +V L +
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 116/217 (53%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ VTYNTI+ LC G + +A E+ +M + P+V+TY LI C + A L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
EM DRG DVVT+NV+++ +CK ++DEA + L+ M P + C+ N++ + +
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM------PSSGCQPNVITHNII 315
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+ +C G+ +A +L + R G P+VVT+NI I+ LC + +A D+ M G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN + + L+ F ++ + + IE L M R P
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 126/243 (51%), Gaps = 6/243 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ VT+N +I+ LC++G + +A ++ +M PN ++YN L+HGFC + A
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
M+ RG D+VT+N ++ LCK+ K+++A +L+ + G P ++ Y +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP------VLITYNTV 455
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
IDGL K GK A +L + L P+ +TY+ + L + ++D+A F + E G+
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIP 253
PN V F ++M + +T + I+ L M R P + +I+++ L ++ ++
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575
Query: 254 QFN 256
N
Sbjct: 576 LLN 578
Score = 131 bits (329), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 122/233 (52%), Gaps = 6/233 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ +TY +I+ C++ V A +L +M+D P+VVTYN L++G C +EA
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+M G Q +V+T N+I+ +C + +A +LL M++ G P ++V +
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP------SVVTFN 348
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LI+ LC+ G L A ++ + + + G PN ++YN +H C +++MD+A + M +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
G P+ V + T++ + + + +E+L + + P + ++D L K
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 9/217 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ +TYN +I G CK G ++ A + +M +++P+VVTYN+++ C + +A +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
M+ R DV+T+ ++++ C++ + A +LLD M G PD +V Y L
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD------VVTYNVL 280
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
++G+CK G+L A + + +G PNV+T+NI + ++C+ + A L DM KG
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+P+ V F L+ RK + I++L M + P
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 6/222 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+PN+++YN ++ G CKE +D+A E +M P++VTYN+++ C +A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+ ++ +G ++T+N ++D L K K +A +LLD M ++PD + Y
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT------ITYS 488
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
L+ GL + GK+ A + R G+ PN VT+N + LC Q D+A D + M +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYAS 233
G PN +T L+ + + +ELL + + +M +S
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 69 EAEYLFIE-MMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
E + F+E M+ G D++ ++ C+ K +A ++L+++ G PD +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD------V 172
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
+ Y +I G CK G++ NA + L R + P+VVTYN + +LC+ ++ +A ++
Sbjct: 173 ITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
M + P+ + +T L+ + R + ++LL M R P +++V+ + K
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 64/112 (57%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+T+TY++++ GL +EG VD+A + F + + I PN VT+NS++ G C + + A
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCE 124
+ M++RG + + ++ ++++ L EA LL+ + G+ + E
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAE 592
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 41 QMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNR 100
+++ +N + +L G Y+N Y ++ + V N + ++ +
Sbjct: 62 KVESSGLNGRAQKFETLSSG--YSNSNGNGHY---SSVNSSFALEDVESNNHLRQMVRTG 116
Query: 101 KMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMP 160
+++E + L+ M+ G PD I+ LI G C++GK + A ++ + L +G +P
Sbjct: 117 ELEEGFKFLENMVYHGNVPD------IIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 161 NVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELL 220
+V+TYN+ I C +++ A + M V+P+ V + T++ S + + +E+L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 221 RSMDKRNVMPYASILSIIVDLLVKN 245
M +R+ P +I+++ ++
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRD 252
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 120/221 (54%), Gaps = 6/221 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN TYN++I+G C G + AK +F M + P+VVTYN+LI GFC + + L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM +GL D T+N ++ C+ K++ A ++ + M+ GV PD IV Y L
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD------IVTYNIL 400
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+D LC GK++ A + + L ++ + +++TYNI I LC +++ +A LF + KGV
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASI 234
P+ + + T++ RK + +L R M + MP I
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 124/219 (56%), Gaps = 6/219 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN + + +ID KEG + +A+ L+ +M ++ PNV TYNSLI+GFC +A+Y+
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F M+ +G DVVT+N ++ CK++++++ +L M G+ DAF Y L
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF------TYNTL 365
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I G C+ GKL A+++ + G+ P++VTYNI + LCN+ +++KA + D++ +
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYA 232
+ + + ++ R ++ + L RS+ ++ V P A
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 10/211 (4%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ VTYNT+I G CK V+ +LF +M + + + TYN+LIHG+C A N A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F M+D G+ D+VT+N+++D LC N K+++A +++ + + + +++I+ Y
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM------DVDIITYN 433
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I GLC+ KLK A L +SLTR G+ P+ + Y I LC +A L M+
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRS 222
G P+ I+ + R + TS EL+++
Sbjct: 494 GFMPSERIYDETL----RDHYTSLSAELIKA 520
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 8/238 (3%)
Query: 8 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDG 67
FG V PN V YNT+I+GLCK ++ A E+F M+ + I + VTYN+LI G +
Sbjct: 178 FGFV--PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
+A L +M+ R + +V+ F ++D K + EA L MI+ V P N+
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP------NV 289
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
Y LI+G C G L +A+ + + G P+VVTYN I C ++++ LF +
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
M +G+ + + TL+ + + + + ++ M V P +I++D L N
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT ++++G C+ +A L M PNVV YN++I+G C D N A
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+F M +G+++D VT+N ++ L + + +A RLL M++ + P N++ +
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP------NVIFFTA 259
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LID K G L AR L + + R ++PNV TYN I+ C + A +F M KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSM 223
P+ V + TL+ F + ++L M
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+ + VTYNT+I GL G A L M I+PNV+ + +LI F + EA
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L+ EM+ R + +V T+N +++ C + + +A + DLM+ G PD +V Y
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD------VVTYNT 329
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI G CK ++++ +L +T GL+ + TYN IH C +++ A +F M G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDK 225
V+P+ V + L+ + K + ++ + K
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ V + ++ + K D L+ +M++ I+ ++ ++ LIH FC + + A L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+MM G + +VT +++ C+ + EA L+D M G P N+V Y +
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP------NVVIYNTV 190
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I+GLCK L NA E+ + + G+ + VTYN I L N + A L DM + +
Sbjct: 191 INGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN + FT L+ +F+++ + L + M +R+V+P
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 6/212 (2%)
Query: 33 DKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVI 92
D A LF +M P++V + ++ N + YL+ +M + G+ D+ +F ++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 93 MDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQS 152
+ C+ ++ A LL M++ G RP +IV G L++G C+ + + A L S
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRP------SIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 153 LTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNE 212
+ G +PNVV YN I+ LC + ++ A ++F ME KG+ + V + TL+
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 213 TSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+ LLR M KR + P + ++D VK
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 5 NREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA 64
NR P+ VTYN ++D LC G ++KA + ++ ++ +++TYN +I G C
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 65 NDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRP 119
+ EA LF + +G++ D + + ++ LC+ EA +L M + G P
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Query: 101 KMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMP 160
K D+A L M+Q P +IV + ++ + K+ K L + G+
Sbjct: 59 KFDDAFSLFCEMLQSRPIP------SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISH 112
Query: 161 NVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELL 220
++ ++ I IH C ++ A L M G P+ V +L+ F + N + + L+
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 172
Query: 221 RSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQF 255
SMD +P I + +++ L KN N++ F
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 119/218 (54%), Gaps = 7/218 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN VTYN++I+GLC G +D+AK++ + + PN VTYN+LI+G+C A ++ +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
M G+ D T+N + C+ K A ++L M+ GV PD + + L
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY------TFNIL 400
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DGLC GK+ A + L ++ + ++TYNI I LC ++++ A LF + +KGV
Sbjct: 401 LDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGV 460
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRN-VMP 230
+P+ + + T+M RK + EL R M K + +MP
Sbjct: 461 SPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGN 68
G+ +PN V YNTIID LC++G V+ A ++ MK I P+VVTYNSLI ++
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
+ + +MM G+ DV+TF+ ++D K ++ EA + + MIQ V P NIV
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP------NIV 290
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
Y LI+GLC G L A+++ L G PN VTYN I+ C +++D + M
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
GV + + TL + + + S ++L M V P +I++D L
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT+ ++++G C +A L Q+ PNVV YN++I C N A
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+ M G++ DVVT+N ++ L + + R+L M++ G+ PD ++ +
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD------VITFSA 259
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LID K G+L A++ + + + PN+VTYN I+ LC +D+A + + KG
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNV 228
PN V + TL+ + + +++L M + V
Sbjct: 320 FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 35 AKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMD 94
A LF M + + P++V ++ L+ N LF + G+ D+ +F ++D
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 95 ELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLT 154
C+ ++ A L M++ G P +IV +G L++G C + + A L +
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEP------SIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 155 RAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETS 214
G PNVV YN I +LC Q++ A D+ M+ G+ P+ V + +L+
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 215 KVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFN 256
+L M + + P S ++D+ K L + Q+N
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYN 278
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 64/296 (21%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA---NDG-- 67
K + TY+TIID LC++G +D A LF +M+ + I +VVTYNSL+ G C A NDG
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 68 ------------------------------NEAEYLFIEMMDRGLQSDVVTFNVIMDELC 97
EA L+ EM+ RG+ +++T+N +MD C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 98 KNRKMDEATRLLDLMIQGGVRPD---------AFCEI--------------------NIV 128
++ EA +LDLM++ PD +C + N V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
Y L+ G C+ GK+K A EL Q + G++P+V+TY I + LC++ +++KA ++F D+
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+ + V++TT++ + + L S+ + V P ++++ L K
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 129/236 (54%), Gaps = 6/236 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ VT+ ++I G C VD ++F + + N VTY+ L+ GFC + AE
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM+ G+ DV+T+ +++D LC N K+++A + + + + + ++ IV Y
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM------DLGIVMYT 477
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+++A L SL G+ PNV+TY + I LC + +A+ L ME
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEI 247
G APN + TL+ + +R + + +L+ M AS + +++D+L+ E+
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGEL 593
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 125/218 (57%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+T T+NT+I GL EG V +A L +M + P+VVTYNS+++G C + D + A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M +R +++DV T++ I+D LC++ +D A L M G++ ++V Y
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS------SVVTYNS 268
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
L+ GLCK GK + L + + ++PNV+T+N+ + + ++ +A++L+ +M +G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
++PN + + TLM + +N S+ +L M + P
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 130/229 (56%), Gaps = 8/229 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+P+ VTYN+I++G+C+ G A +L +M++ N+ +V TY+++I C + A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM +G++S VVT+N ++ LCK K ++ LL M+ + P N++ +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP------NVITFN 302
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
L+D K GKL+ A EL + + G+ PN++TYN + C ++ +A+++ LD+ V+
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM-LDLMVR 361
Query: 192 G-VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
+P+ V FT+L+ + +++ R++ KR ++ A SI+V
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 6/231 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ V ++ + + + + Q++ I N+ T N +I+ FC A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
++M G + D TFN ++ L K+ EA L+D M++ G +PD +V Y +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD------VVTYNSI 199
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
++G+C+ G A +L + + + +V TY+ I +LC D +D A LF +ME KG+
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+ V + +L+ + + + LL+ M R ++P ++++D+ VK
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 86/222 (38%), Gaps = 45/222 (20%)
Query: 28 KEGFVDKAKE----LFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQ 83
+ G VD K+ LF +M P++V ++ N ++ G+
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 84 SDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKL 143
++ T N++++ C+ K A +L +++ G PD + LI GL GK+
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT------TTFNTLIKGLFLEGKV 174
Query: 144 KNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTL 203
A L + G P+VVTYN ++ +C
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGIC------------------------------ 204
Query: 204 MPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
R +TS ++LLR M++RNV S I+D L ++
Sbjct: 205 -----RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 6/240 (2%)
Query: 8 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDG 67
F ++ P+ VT+NTIID C+ VD+ +L ++ + N TYN+LIHGFC ++
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
N A+ LF EM+ G+ D +T N+++ C+N K++EA L +++ + +++
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI------DLDT 537
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
VAY +I G+CK K+ A +L SL G+ P+V TYN+ I C + A+ LF
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEI 247
M+ G P+ + TL+ ++ E K IEL+ M A + ++ DL+ +
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 25/233 (10%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ V Y+ IID LCK+G A+ LF +M ++ I PNV TYN +I GFC ++A+
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD---------AFC 123
L +M++R + DV+TFN ++ K K+ EA +L D M+ + PD FC
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 124 EIN----------------IVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNI 167
+ N +V + +ID C+ ++ +L + ++R GL+ N TYN
Sbjct: 413 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 168 TIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELL 220
IH C + ++ A DLF +M GV P+ + L+ F + + +EL
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 123/235 (52%), Gaps = 10/235 (4%)
Query: 5 NREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA 64
N+ G + VTY TI++G+CK G A L +M++ +I P+VV Y+++I C
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 65 NDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCE 124
++A+YLF EM+++G+ +V T+N ++D C + +A RLL MI+ + PD
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD---- 365
Query: 125 INIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDL 184
++ + LI K GKL A +L + + P+ VTYN I+ C + D A +
Sbjct: 366 --VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 185 FLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
F M +P+ V F T++ + R + ++LLR + +R ++ + + ++
Sbjct: 424 FDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 120/224 (53%), Gaps = 6/224 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P +T+NT+I+GLC EG V +A L +M + ++ +VVTY ++++G C D A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M + ++ DVV ++ I+D LCK+ +A L M++ G+ P N+ Y C+
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP------NVFTYNCM 337
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
IDG C G+ +A+ L + + + P+V+T+N I A + ++ +A L +M + +
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSI 237
P+ V + +++ F + N + M +V+ + +I+ +
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV 441
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 23/234 (9%)
Query: 13 KPNTVTYNTIIDGLCKE----------------GFVDKAKELFLQMKDENINPNVVTYNS 56
+P+ VT+NT++ GLC E GF++ A LF QM + + P V+T+N+
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNT 231
Query: 57 LIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGG 116
LI+G C EA L +M+ +GL DVVT+ I++ +CK A LL M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 117 VRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDE 176
++PD +V Y +ID LCK G +A+ L + G+ PNV TYN I C+
Sbjct: 292 IKPD------VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 177 QMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+ A L DM + + P+ + F L+ + +++ + + +L M R + P
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 21/245 (8%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEA---- 70
N ++N +I C + + F ++ P+VVT+N+L+HG C + +EA
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 71 -----------EYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRP 119
LF +M++ GL V+TFN +++ LC ++ EA L++ M+ G+
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH- 258
Query: 120 DAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMD 179
I++V YG +++G+CK+G K+A L + + P+VV Y+ I LC D
Sbjct: 259 -----IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 180 KAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
A LF +M KG+APN + ++ F S LLR M +R + P + ++
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 240 DLLVK 244
VK
Sbjct: 374 SASVK 378
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 33 DKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVI 92
D A L+ +M+ I N+ ++N LI FC + + + F ++ G Q DVVTFN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 93 MDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQS 152
+ LC ++ EA L M++ G F E A L
Sbjct: 183 LHGLCLEDRISEALALFGYMVETG-----FLE---------------------AVALFDQ 216
Query: 153 LTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNE 212
+ GL P V+T+N I+ LC + ++ +A L M KG+ + V + T++ + +
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 213 TSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
T + LL M++ ++ P I S I+D L K+
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 129/231 (55%), Gaps = 9/231 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN TYNT+I+G CK V+ ELF +M + N VTY ++I GF A D + A+
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+F +M+ + +D++T+++++ LC K+D A + + + + E+NI Y
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM------ELNIFIYN 507
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I+G+CK GK+ A +L SL+ + P+VVTYN I LC+ + +A DLF M+
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
G PN + TL+ + +R + + EL++ M + AS +S++ ++L
Sbjct: 565 GTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 123/228 (53%), Gaps = 10/228 (4%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+P+ VTY T+++GLCK G +D A L +M+ I NVV +N++I C A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF EM +G++ +VVT+N +++ LC + +A+RLL M++ + P N+V +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP------NVVTFN 332
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LID K GKL A +L + + + + P+ +TYN+ I+ C ++D+A +F M K
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKR----NVMPYASIL 235
PN + TL+ F + +EL R M +R N + Y +I+
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 133/254 (52%), Gaps = 22/254 (8%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
K N V +NTIID LCK V+ A +LF +M+ + I PNVVTYNSLI+ C ++A
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+++ + +VVTFN ++D K K+ EA +L + MIQ + PD + Y
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT------ITYNL 368
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G C +L A+++ + + +PN+ TYN I+ C ++++ +LF +M +G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDK----RNVMPYASILS------------ 236
+ N V +TT++ F + + + + M ++M Y+ +L
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 237 IIVDLLVKNEISLN 250
+I L K+E+ LN
Sbjct: 489 VIFKYLQKSEMELN 502
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 6/227 (2%)
Query: 18 TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEM 77
TY+ I+ C+ + A + +M P++VT +SL++G+C++ ++A L +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 78 MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGL 137
++ G + D TF ++ L + K EA L+D M+Q G +PD +V YG +++GL
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD------LVTYGTVVNGL 233
Query: 138 CKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNC 197
CK G + A L + A + NVV +N I +LC ++ A DLF +ME KG+ PN
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 198 VIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
V + +L+ S LL +M ++ + P + ++D K
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT +++++G C + A L QM + P+ T+ +LIHG N +EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+ RG Q D+VT+ +++ LCK +D A LL+ M ++ N+V +
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA------NVVIFNT 263
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ID LCK ++ A +L + G+ PNVVTYN I+ LCN + A L +M K
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+ PN V F L+ +F ++ + + +L M +R++ P
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ VTYNT+I GLC + + +A +LF +MK++ PN TYN+LI D +
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNR 100
L EM G D T +++ + L R
Sbjct: 592 LIKEMRSSGFVGDASTISLVTNMLHDGR 619
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 137 bits (345), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 124/226 (54%), Gaps = 7/226 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN T+N +IDG K+ + + ++F +M D+++ PNV++YNSLI+G C +EA +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M+ G+Q +++T+N +++ CKN + EA + + G P Y L
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP------TTRMYNML 407
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
ID CK+GK+ + L + + R G++P+V TYN I LC + ++ A LF + KG+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
P+ V F LM + RK E+ K LL+ M K + P +I++
Sbjct: 468 -PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 131/236 (55%), Gaps = 9/236 (3%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFC-YANDGN--E 69
+PN T+N +I+ LCK G ++KA+++ MK +PNVV+YN+LI G+C +G +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 70 AEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVA 129
A+ + EM++ + ++ TFN+++D K+ + + ++ M+ V+P N+++
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP------NVIS 333
Query: 130 YGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDME 189
Y LI+GLC GK+ A + + AG+ PN++TYN I+ C ++ + +A D+F ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 190 VKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+G P ++ L+ ++ + + L M++ ++P + ++ L +N
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 119/228 (52%), Gaps = 12/228 (5%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN ++YN++I+GLC G + +A + +M + PN++TYN+LI+GFC + EA
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+F + +G +N+++D CK K+D+ L + M + G+ PD + Y C
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD------VGTYNC 441
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI GLC+ G ++ A++L LT GL P++VT++I + C + KA L +M G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKR-----NVMPYASIL 235
+ P + + +M + ++ + M+K NV Y +L
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P T YN +ID CK G +D L +M+ E I P+V TYN LI G C + A+ L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F ++ +GL D+VTF+++M+ C+ + +A LL M + G++P + Y +
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH------LTYNIV 511
Query: 134 IDGLCKIGKLKNARELSQSLTRAG-LMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+ G CK G LK A + + + L NV +YN+ + +++ A+ L +M KG
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 193 VAPNCVIF 200
+ PN + +
Sbjct: 572 LVPNRITY 579
Score = 94.4 bits (233), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TYN +I GLC+ G ++ AK+LF Q+ + + P++VT++ L+ G+C + +A L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
EM GL+ +T+N++M CK + AT + M + +N+ +Y L
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM-----EKERRLRMNVASYNVL 547
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNI 167
+ G + GKL++A L + GL+PN +TY I
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Score = 90.9 bits (224), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 65 NDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLL-DLMIQGGVRPDAFC 123
N + EY++ EM+ R +Q +V TFNV+++ LCK KM++A ++ D+ + G C
Sbjct: 202 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG-------C 254
Query: 124 EINIVAYGCLIDGLCKI---GKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDK 180
N+V+Y LIDG CK+ GK+ A + + + + PN+ T+NI I D+ +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 181 AHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
+ +F +M + V PN + + +L+ + S+ I + M V P + +++
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 241 LLVKNEISLNSIPQFNRQK 259
KN++ ++ F K
Sbjct: 375 GFCKNDMLKEALDMFGSVK 393
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
L+ L K + + + + + R + PNV T+N+ I+ALC +M+KA D+ DM+V G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIE---LLRSMDKRNVMPYASILSIIVDLLVKNE 246
+PN V + TL+ + + K+ + +L+ M + +V P + +I++D K++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD 310
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQM-KDENINPNVVTYNSLIHGFCYANDGNEAE 71
KP +TYN ++ G CKEG + A + QM K+ + NV +YN L+ G+ +A
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDEL 96
L EM+++GL + +T+ ++ +E+
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEM 586
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 137 bits (344), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 131/245 (53%), Gaps = 6/245 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN V+Y+T++D CKEG + +A + ++ M+ + PN TY SLI C + ++A
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L EM+ G++ +VVT+ ++D LC +M EA L M GV P N+ +Y
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP------NLASYNA 477
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI G K + A EL L G+ P+++ Y I LC+ E+++ A + +M+ G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSI 252
+ N +I+TTLM ++ + ++ + LL M + ++ +++D L KN++ ++
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 253 PQFNR 257
FNR
Sbjct: 598 DYFNR 602
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 120/251 (47%), Gaps = 29/251 (11%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGN 68
G +P TYN +ID +CKEG V+ A+ LF +MK + P+ VTYNS+I GF +
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRP--------- 119
+ F EM D + DV+T+N +++ CK K+ M G++P
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 120 DAFCE--------------------INIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLM 159
DAFC+ N Y LID CKIG L +A L + + G+
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 160 PNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIEL 219
NVVTY I LC+ E+M +A +LF M+ GV PN + L+ F++ + +EL
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 220 LRSMDKRNVMP 230
L + R + P
Sbjct: 495 LNELKGRGIKP 505
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 10/231 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P T + N ++ K G D K F M P V TYN +I C D A L
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM RGL D VT+N ++D K ++D+ + M D CE +++ Y L
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM------KDMCCEPDVITYNAL 338
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I+ CK GKL E + + GL PNVV+Y+ + A C + M +A ++DM G+
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 194 APNCVIFTTLMPSFIRKNETSKVI----ELLRSMDKRNVMPYASILSIIVD 240
PN +T+L+ + + S E+L+ + NV+ Y +++ + D
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 4 GNREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCY 63
GN V + N VTY +IDGLC + +A+ELF +M + PN+ +YN+LIHGF
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 64 ANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRP---- 119
A + + A L E+ RG++ D++ + + LC K++ A +++ M + G++
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 120 -----DAF--------------------CEINIVAYGCLIDGLCKIGKLKNARELSQSLT 154
DA+ E+ +V + LIDGLCK + A + ++
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 155 R-AGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNET 213
GL N + I LC D Q++ A LF M KG+ P+ +T+LM ++
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 214 SKVIELLRSMD----KRNVMPYASIL 235
+ + L M K +++ Y S++
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLV 690
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 9/228 (3%)
Query: 3 NGNREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFC 62
N +E G+ K N++ Y T++D K G + L +MK+ +I VVT+ LI G C
Sbjct: 531 NEMKECGI--KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 63 YANDGNEAEYLFIEMM-DRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDA 121
++A F + D GLQ++ F ++D LCK+ +++ AT L + M+Q G+ PD
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 122 FCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKA 181
AY L+DG K G + A L + G+ +++ Y + L + Q+ KA
Sbjct: 649 ------TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Query: 182 HDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVM 229
+M +G+ P+ V+ +++ + +EL + K ++
Sbjct: 703 RSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 91/242 (37%), Gaps = 41/242 (16%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEA 70
VC P ++ + L G +++A + F +MK + P + N L+H F
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA-------- 238
Query: 71 EYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAY 130
K K D+ R MI G RP F Y
Sbjct: 239 ---------------------------KLGKTDDVKRFFKDMIGAGARPTVF------TY 265
Query: 131 GCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEV 190
+ID +CK G ++ AR L + + GL+P+ VTYN I ++D F +M+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 191 KGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLN 250
P+ + + L+ F + + +E R M + P S +VD K +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 251 SI 252
+I
Sbjct: 386 AI 387
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 126/233 (54%), Gaps = 6/233 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ V YN IID LCK V+ A + F +++ + I PNVVTY +L++G C ++ ++A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M+ + + +V+T++ ++D KN K+ EA L + M++ + PD IV Y
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD------IVTYSS 300
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+GLC ++ A ++ + G + +VV+YN I+ C ++++ LF +M +G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ N V + TL+ F + + K E MD + P +I++ L N
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 122/227 (53%), Gaps = 10/227 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN VTY +++GLC A L M + I PNV+TY++L+ F EA+
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF EM+ + D+VT++ +++ LC + ++DEA ++ DLM+ G C ++V+Y
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CLADVVSYNT 335
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G CK ++++ +L + +++ GL+ N VTYN I +DKA + F M+ G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKR----NVMPYASIL 235
++P+ + L+ E K + + M KR +++ Y +++
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 20/242 (8%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ VT ++++G C+ V A L +M + P++V YN++I C N+A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
F E+ +G++ +VVT+ +++ LC + + +A RLL MI+ + P N++ Y
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP------NVITYSA 265
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
L+D K GK+ A+EL + + R + P++VTY+ I+ LC +++D+A+ +F M KG
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSI 252
+ V + TL+ F + ++L R M +R LV N ++ N++
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG--------------LVSNTVTYNTL 371
Query: 253 PQ 254
Q
Sbjct: 372 IQ 373
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 6/223 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ VTY+++I+GLC +D+A ++F M + +VV+YN+LI+GFC A + L
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F EM RGL S+ VT+N ++ + +D+A M G+ PD I Y L
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD------IWTYNIL 406
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+ GLC G+L+ A + + + + + ++VTY I +C ++++A LF + +KG+
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILS 236
P+ V +TT+M K +V L M + +M LS
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 105/185 (56%), Gaps = 6/185 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C + V+YNT+I+G CK V+ +LF +M + N VTYN+LI GF A D ++A+
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
F +M G+ D+ T+N+++ LC N ++++A + + M + + +++IV Y
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM------DLDIVTYT 439
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+I G+CK GK++ A L SL+ GL P++VTY + LC + + L+ M+ +
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 192 GVAPN 196
G+ N
Sbjct: 500 GLMKN 504
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 118/226 (52%), Gaps = 10/226 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ V +N ++ + K D L +M+ I ++ T+N +I+ FC + A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M+ G + D VT +++ C+ ++ +A L+D M++ G +PD IVAY +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD------IVAYNAI 196
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
ID LCK ++ +A + + + R G+ PNVVTY ++ LCN + A L DM K +
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASIL 235
PN + ++ L+ +F++ + + EL M + ++ P Y+S++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 6/211 (2%)
Query: 35 AKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMD 94
A +LF M P++V +N L+ + L +M G+++D+ TFN++++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 95 ELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLT 154
C ++ A +L M++ G PD V G L++G C+ ++ +A L +
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDR------VTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 155 RAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETS 214
G P++V YN I +LC ++++ A D F ++E KG+ PN V +T L+ + S
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 215 KVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
LL M K+ + P S ++D VKN
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 84 SDVVTFNVIMDELCKNR----KMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCK 139
S V+ + + L K R K+++A L M++ P +IV + L+ + K
Sbjct: 44 SSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFP------SIVDFNRLLSAIVK 97
Query: 140 IGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVI 199
+ K L + + G+ ++ T+NI I+ C Q+ A + M G P+ V
Sbjct: 98 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157
Query: 200 FTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
+L+ F R+N S + L+ M + P + I+D L K +
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVT 53
KP+ VTY T++ GLC +G + + + L+ +MK E + N T
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN TYN +I G C G +D A LF +M+ + PNVVTYN+LI G+C ++ L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
M +GL+ +++++NV+++ LC+ +M E + +L M + G D V Y L
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE------VTYNTL 316
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I G CK G A + + R GL P+V+TY IH++C M++A + M V+G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN +TTL+ F +K ++ +LR M+ P
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 122/217 (56%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN TY T++DG ++G++++A + +M D +P+VVTYN+LI+G C +A +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M ++GL DVV+++ ++ C++ +DEA R+ M++ G++PD + Y L
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT------ITYSSL 491
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I G C+ + K A +L + + R GL P+ TY I+A C + ++KA L +M KGV
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
P+ V ++ L+ +++ T + LL + +P
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ +TY ++I +CK G +++A E QM+ + PN TY +L+ GF NEA +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
EM D G VVT+N +++ C KM++A +L+ M + G+ PD +V+Y +
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD------VVSYSTV 456
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+ G C+ + A + + + G+ P+ +TY+ I C + +A DL+ +M G+
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
P+ +T L+ ++ + + K ++L M ++ V+P S++++ L K
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 33/257 (12%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTYNT+IDG CK +D +L M + + PN+++YN +I+G C E
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS 295
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV--- 128
++ EM RG D VT+N ++ CK +A + M++ G+ P +++
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 129 --------------------------AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNV 162
Y L+DG + G + A + + + G P+V
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 163 VTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRS 222
VTYN I+ C +M+ A + DM+ KG++P+ V ++T++ F R + + + + R
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 223 MDKRNVMP----YASIL 235
M ++ + P Y+S++
Sbjct: 476 MVEKGIKPDTITYSSLI 492
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 13/223 (5%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+T+TY+++I G C++ +A +L+ +M + P+ TY +LI+ +C D +A
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLL-DLMIQGGVRPDAFCE------- 124
L EM+++G+ DVVT++V+++ L K + EA RLL L + V D
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 125 -INIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHD 183
I + LI G C G + A ++ +S+ P+ YNI IH C + KA+
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 184 LFLDMEVKGVAPNCVIFTTLMPSFIRKNET----SKVIELLRS 222
L+ +M G + V L+ + ++ + S ++ +LRS
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 116/230 (50%), Gaps = 11/230 (4%)
Query: 11 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDG-NE 69
+C + ++ ++ + +DKA + + P V++YN+++ + +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 70 AEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVA 129
AE +F EM++ + +V T+N+++ C +D A L D M G P N+V
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP------NVVT 242
Query: 130 YGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDME 189
Y LIDG CK+ K+ + +L +S+ GL PN+++YN+ I+ LC + +M + + +M
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 190 VKGVAPNCVIFTTLMPSFIRKNETSKVI----ELLRSMDKRNVMPYASIL 235
+G + + V + TL+ + ++ + + E+LR +V+ Y S++
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 7 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYN----------- 55
E GV+ P+ VTY+ +I+GL K+ +AK L L++ E P+ VTY+
Sbjct: 548 EKGVL--PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 56 ----SLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDL 111
SLI GFC EA+ +F M+ + + D +N+++ C+ + +A L
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 112 MIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHA 171
M++ G ++ V L+ L K GK+ + + R+ + + +
Sbjct: 666 MVKSGFL------LHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 172 LCNDEQMDKAHDLFLDMEVKGVAPNCV 198
+ MD D+ +M G PN +
Sbjct: 720 NHREGNMDVVLDVLAEMAKDGFLPNGI 746
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 6/234 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTY+T ID CK G + A + F MK + ++PNVVT+ LI G+C A D A
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
L+ EM + +VVT+ ++D CK +M A + M++ V P N + Y
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP------NSLVYT 272
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+IDG + G NA + + G+ ++ Y + I LC + ++ +A ++ DME
Sbjct: 273 TIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ P+ VIFTT+M ++ + + + + +R P LS ++D + KN
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 116/215 (53%), Gaps = 10/215 (4%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDEN---INPNVVTYNSLIHGFCYANDGN 68
C+P+ ++YN++IDG C+ G + A + ++ + P++V++NSL +GF +
Sbjct: 87 CEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD 146
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
E ++++ +M + +VVT++ +D CK+ ++ A + M + + P N+V
Sbjct: 147 EV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSP------NVV 199
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
+ CLIDG CK G L+ A L + + R + NVVTY I C +M +A +++ M
Sbjct: 200 TFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM 259
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSM 223
V PN +++TT++ F ++ ++ ++ L M
Sbjct: 260 VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ ++N+++ +CK G V A+++ M P+V++YNSLI G C D A +
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 74 FIEM-MDRGL--QSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAY 130
+ G + D+V+FN + + K + +DE + +M++ C N+V Y
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-------CSPNVVTY 166
Query: 131 GCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEV 190
ID CK G+L+ A + S+ R L PNVVT+ I C ++ A L+ +M
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 191 KGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
++ N V +T L+ F +K E + E+ M + V P + + + I+D
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N VTY +IDG CK+G + +A+E++ +M ++ + PN + Y ++I GF D + A
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+M+++G++ D+ + VI+ LC N K+ EAT +++ M + + PD +V + ++
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD------MVIFTTMM 345
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
+ K G++K A + L G P+VV + I + + Q+ +A F +
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK----- 400
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
N V++T L+ + ++ + +V L + + ++P
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 114/249 (45%), Gaps = 36/249 (14%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
+ Y II GLC G + +A E+ M+ ++ P++V + ++++ + + A ++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 75 IEMMDRGLQSDVVT------------------------------FNVIMDELCKNRKMDE 104
++++RG + DVV + V++D LCK E
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIE 421
Query: 105 ATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVT 164
RL + + G+ PD F Y I GLCK G L +A +L + + GL+ +++
Sbjct: 422 VERLFSKISEAGLVPDKF------MYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 165 YNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMD 224
Y I+ L + M +A +F +M G++P+ +F L+ ++ ++ + +LL M
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQ 535
Query: 225 KRNVMPYAS 233
+R ++ S
Sbjct: 536 RRGLVTAVS 544
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
K N V Y +ID LCKEG + + LF ++ + + P+ Y S I G C + +A
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L M+ GL D++ + ++ L M EA ++ D M+ G+ PD+ +
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS------AVFDL 513
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNV 162
LI K G + A +L + R GL+ V
Sbjct: 514 LIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 32 VDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNV 91
V +A + +++ + P+ T N IH +N G + ++ RG +FN
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 92 IMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
++ +CK ++ A ++ M + G PD +++Y LIDG C+ G +++A + +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPD------VISYNSLIDGHCRNGDIRSASLVLE 115
Query: 152 SLTRA-GLM--PNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFI 208
SL + G + P++V++N + + +D+ +++ + +K +PN V ++T + +F
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFC 174
Query: 209 RKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
+ E ++ SM + + P + ++D
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 12/240 (5%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P++ TY T+I GLC+ G +D+AK+LF +M +++ P VVTY SLI+G C + + +EA
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
EM +G++ +V T++ +MD LCK+ + +A L ++M+ G RP N+V Y
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP------NMVTYT 301
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LI GLCK K++ A EL + GL P+ Y I C + +A + +M +
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Query: 192 GVAPNCVIFTTLMPS---FIR---KNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
G+ PN + + + + +R N S+ L SM R + L +V L K
Sbjct: 362 GITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKK 421
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 117/235 (49%), Gaps = 14/235 (5%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P VTY ++I+GLC VD+A +MK + I PNV TY+SL+ G C +A
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
LF MM RG + ++VT+ ++ LCK +K+ EA LLD M G++PDA YG
Sbjct: 283 ELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG------LYG 336
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNI-------TIHALCNDEQMDKAHDL 184
+I G C I K + A + G+ PN +T+NI + LC + +A L
Sbjct: 337 KVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTL 395
Query: 185 FLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
+L M +G++ +L+ +K E K ++L+ + +P +++
Sbjct: 396 YLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 119/226 (52%), Gaps = 9/226 (3%)
Query: 6 REFGVVCKPNTVTYNTIIDGLCK-EGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA 64
RE G+ P + N +I LC+ +G VD ++FL+M +P+ TY +LI G C
Sbjct: 148 REIGL--PPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRF 205
Query: 65 NDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCE 124
+EA+ LF EM+++ VVT+ +++ LC ++ +DEA R L+ M G+ P
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP----- 260
Query: 125 INIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDL 184
N+ Y L+DGLCK G+ A EL + + G PN+VTY I LC ++++ +A +L
Sbjct: 261 -NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 185 FLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
M ++G+ P+ ++ ++ F ++ + L M + P
Sbjct: 320 LDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 38 LFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELC 97
+F +MKD + +P+ Y +++ N N A + M + GL V + NV++ LC
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 98 KN-RKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRA 156
+N +D ++ M + G PD++ YG LI GLC+ G++ A++L +
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSY------TYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 157 GLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKV 216
P VVTY I+ LC + +D+A +M+ KG+ PN +++LM + + +
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQA 281
Query: 217 IELLRSMDKRNVMPYASILSIIVDLLVKNEISLNSIPQFNR 257
+EL M R P + ++ L K + ++ +R
Sbjct: 282 MELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 14 PNTVTYNT-------IIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAND 66
PN +T+N ++ GLC + +A L+L M+ I+ V T SL+ C +
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGE 423
Query: 67 GNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLL 109
+A L E++ G T+ +++ + EA+ L
Sbjct: 424 FQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 6/221 (2%)
Query: 5 NREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA 64
N G KPN + YNT+I GL +G + +A +L +M ++ + P V T+N L++G C
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 65 NDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCE 124
++A+ L M+ +G D+ TFN+++ KM+ A +LD+M+ GV PD +
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY-- 497
Query: 125 INIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDL 184
Y L++GLCK K ++ E +++ G PN+ T+NI + +LC ++D+A L
Sbjct: 498 ----TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 185 FLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDK 225
+M+ K V P+ V F TL+ F + + L R M++
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 122/234 (52%), Gaps = 10/234 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGN--EAE 71
P+ TY ++IDGLC EG ++A LF + + I PNV+ YN+LI G +N G EA
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL--SNQGMILEAA 411
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
L EM ++GL +V TFN++++ LCK + +A L+ +MI G PD F +
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF------TFN 465
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LI G K++NA E+ + G+ P+V TYN ++ LC + + + + M K
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
G APN F L+ S R + + + LL M ++V P A ++D KN
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 7/230 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ T+N +I G + ++ A E+ M D ++P+V TYNSL++G C + +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+ M+++G ++ TFN++++ LC+ RK+DEA LL+ M V PDA V +G L
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA------VTFGTL 572
Query: 134 IDGLCKIGKLKNARELSQSLTRA-GLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
IDG CK G L A L + + A + + TYNI IHA + A LF +M +
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
+ P+ + ++ F + + + L M + +P + L +++ L
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%), Gaps = 6/227 (2%)
Query: 18 TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEM 77
T+N ++ LCK+G V + ++L ++ + PN+ TYN I G C + + A + +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 78 MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGL 137
+++G + DV+T+N ++ LCKN K EA L M+ G+ PD++ Y LI G
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY------TYNTLIAGY 331
Query: 138 CKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNC 197
CK G ++ A + G +P+ TY I LC++ + ++A LF + KG+ PN
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 198 VIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+++ TL+ + + +L M ++ ++P +I+V+ L K
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 6/226 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN TYN I GLC+ G +D A + + ++ P+V+TYN+LI+G C + EAE
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M++ GL+ D T+N ++ CK + A R++ + G PD F Y L
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF------TYRSL 362
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
IDGLC G+ A L G+ PNV+ YN I L N + +A L +M KG+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
P F L+ + S L++ M + P +I++
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINP---------------------- 49
C+P +YN I+ L G+ D+A +++++M+D I P
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166
Query: 50 -------------NVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDEL 96
NVV Y +++ GF N E LF +M+ G+ + TFN ++ L
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 97 CKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRA 156
CK + E +LLD +I+ GV P N+ Y I GLC+ G+L A + L
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLP------NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 157 GLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIR 209
G P+V+TYN I+ LC + + +A M +G+ P+ + TL+ + +
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Score = 94.0 bits (232), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN T+N +++ LC+ +D+A L +MK++++NP+ VT+ +LI GFC D + A
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 72 YLFIEMMDR-GLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAY 130
LF +M + + S T+N+I+ + + A +L M+ + PD + Y
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY------TY 640
Query: 131 GCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEV 190
++DG CK G + + + G +P++ T I+ LC ++++ +A + M
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 191 KGVAPNCV 198
KG+ P V
Sbjct: 701 KGLVPEAV 708
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 41/238 (17%)
Query: 28 KEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVV 87
++G V +A +F +M + P V +YN+++ + ++A +++ M DRG+ DV
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 88 TFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDG----------- 136
+F + M CK + A RLL+ M G CE+N+VAY ++ G
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQG------CEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 137 ------------------------LCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHAL 172
LCK G +K +L + + G++PN+ TYN+ I L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 173 CNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
C ++D A + + +G P+ + + L+ + ++ + L M + P
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 124/232 (53%), Gaps = 7/232 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN +TYN +I+G CK G ++ A ++ M+ ++PN TYN LI G+C +N ++A +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGV 449
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M++R + DVVT+N ++D C++ D A RLL LM G+ PD + Y +
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW------TYTSM 503
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
ID LCK +++ A +L SL + G+ PNVV Y I C ++D+AH + M K
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
PN + F L+ + + L M K + P S +I++ L+K+
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 17/251 (6%)
Query: 2 ANGNREFGVVCK-------PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTY 54
+N ++ GV+ K P+ VTYN++IDG C+ G D A L M D + P+ TY
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 55 NSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQ 114
S+I C + EA LF + +G+ +VV + ++D CK K+DEA +L+ M+
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 115 GGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCN 174
P N + + LI GLC GKLK A L + + + GL P V T I IH L
Sbjct: 561 KNCLP------NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 175 DEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP---- 230
D D A+ F M G P+ +TT + ++ R+ +++ M + V P
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 231 YASILSIIVDL 241
Y+S++ DL
Sbjct: 675 YSSLIKGYGDL 685
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TY ++I G C+ +D A ++F +M + N V Y LIHG C A +EA L
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F++M D V T+ V++ LC + + EA L+ M + G++P NI Y L
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP------NIHTYTVL 364
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
ID LC K + AREL + GLMPNV+TYN I+ C ++ A D+ ME + +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
+PN + L+ + + N K + +L M +R V+P + ++D
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLID 470
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 121/235 (51%), Gaps = 7/235 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+ N V Y +I GLC +D+A +LF++MKD+ P V TY LI C + +EA
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
L EM + G++ ++ T+ V++D LC K ++A LL M++ G+ P N++ Y
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP------NVITYN 397
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LI+G CK G +++A ++ + + L PN TYN I C + KA + M +
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLER 456
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
V P+ V + +L+ R LL M+ R ++P + ++D L K++
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 114/212 (53%), Gaps = 6/212 (2%)
Query: 19 YNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMM 78
YNT+++ L + G VD+ K+++++M ++ + PN+ TYN +++G+C + EA +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 79 DRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLC 138
+ GL D T+ ++ C+ + +D A ++ + M P C N VAY LI GLC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM------PLKGCRRNEVAYTHLIHGLC 299
Query: 139 KIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCV 198
++ A +L + P V TY + I +LC E+ +A +L +ME G+ PN
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 199 IFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+T L+ S + + K ELL M ++ +MP
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Score = 117 bits (293), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 7/230 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TY ++ID LCK V++A +LF ++ + +NPNVV Y +LI G+C A +EA +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M+ + + +TFN ++ LC + K+ EAT L + M++ G++P + L
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP------TVSTDTIL 608
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I L K G +A Q + +G P+ TY I C + ++ A D+ M GV
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYA-SILSIIVDLL 242
+P+ +++L+ + +T+ ++L+ M P + LS+I LL
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 54 YNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMI 113
YN+L++ +E + +++EM++ + ++ T+N +++ CK ++EA + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 114 QGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALC 173
+ G+ PD F Y LI G C+ L +A ++ + G N V Y IH LC
Sbjct: 246 EAGLDPDFF------TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 174 NDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYAS 233
++D+A DLF+ M+ P +T L+ S S+ + L++ M++ + P
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 234 ILSIIVDLL 242
++++D L
Sbjct: 360 TYTVLIDSL 368
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ TY T I C+EG + A+++ +M++ ++P++ TY+SLI G+ N A
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 73 LFIEMMDRGLQSDVVTFNVIMD---------------ELCKNRKM---DEATRLLDLMIQ 114
+ M D G + TF ++ ELC M D LL+ M++
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 115 GGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTR-AGLMPNVVTYNITIHALC 173
V P+A +Y LI G+C++G L+ A ++ + R G+ P+ + +N + C
Sbjct: 754 HSVTPNA------KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 174 NDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSM 223
++ ++A + DM G P L+ +K E + + +++
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 89 FNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARE 148
+N +++ L + +DE ++ M++ V P NI Y +++G CK+G ++ A +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCP------NIYTYNKMVNGYCKLGNVEEANQ 239
Query: 149 LSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFI 208
+ AGL P+ TY I C + +D A +F +M +KG N V +T L+
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 209 RKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
+ ++L M P ++++ L +E
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 103/262 (39%), Gaps = 59/262 (22%)
Query: 12 CKPNTVTYNTIIDGLC-----------------------------------KEGFVDKAK 36
C PN++T+N +I GLC K+G D A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 37 ELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDEL 96
F QM P+ TY + I +C +AE + +M + G+ D+ T++ ++
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 97 CKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNAR--------- 147
+ + A +L M G P ++++ + L++ K GK K +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH--LLE--MKYGKQKGSEPELCAMSNM 738
Query: 148 -------ELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEV-KGVAPNCVI 199
EL + + + PN +Y I +C + A +F M+ +G++P+ ++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 200 FTTLMP---SFIRKNETSKVIE 218
F L+ + NE +KV++
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVD 820
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQM-KDENINPNVVTYNSLIHGFCYANDGNEAEY 72
PN +Y +I G+C+ G + A+++F M ++E I+P+ + +N+L+ C NEA
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+ +M+ G + + V++ L K + + T + ++Q G D +A+
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDE------LAWKI 871
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHA 171
+IDG+ K G ++ EL + + G + TY++ I
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/113 (17%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 127 IVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFL 186
I Y L++ L + G + +++ + + PN+ TYN ++ C +++A+
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 187 DMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMD----KRNVMPYASIL 235
+ G+ P+ +T+L+ + ++ + ++ M +RN + Y ++
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
>sp|Q9M316|PP292_ARATH Pentatricopeptide repeat-containing protein At3g61520,
mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2
SV=1
Length = 766
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 122/229 (53%), Gaps = 6/229 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTYN +IDG C+ G ++ AKE+ +MK++ I PNVVT N+++ G C + N A
Sbjct: 402 CAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
F++M G++ +VVT+ ++ C +++A + M++ G PDA Y
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA------KIYY 515
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LI GLC++ + +A + + L G +++ YN+ I C+ +K +++ DME +
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKE 575
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
G P+ + + TL+ F + + V ++ M + + P + ++D
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 123/242 (50%), Gaps = 13/242 (5%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMK-DENINPNVVTYNSLIHGFCYANDG 67
G V K +++ +NT+IDGLCK G + +A+EL ++MK +E PN VTYN LI G+C A
Sbjct: 363 GNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKL 422
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
A+ + M + ++ +VVT N I+ +C++ ++ A M + GV+ N+
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG------NV 476
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHD---L 184
V Y LI C + ++ A + + AG P+ Y I LC Q+ + HD +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC---QVRRDHDAIRV 533
Query: 185 FLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
++ G + + + + L+ F KN T KV E+L M+K P + + ++ K
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 245 NE 246
++
Sbjct: 594 HK 595
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 16/222 (7%)
Query: 10 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDEN------INPNVVTYNSLIHGFCY 63
V +P+ VT +I+ LCK VD+A E+F +M+ + I + + +N+LI G C
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 64 ANDGNEAEYLFIEM-MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAF 122
EAE L + M ++ + VT+N ++D C+ K++ A ++ M + ++P
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP--- 439
Query: 123 CEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAH 182
N+V ++ G+C+ L A + + G+ NVVTY IHA C+ ++KA
Sbjct: 440 ---NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 183 DLFLDMEVKGVAPNCVIFTTLMPSFI---RKNETSKVIELLR 221
+ M G +P+ I+ L+ R ++ +V+E L+
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 36/265 (13%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN+V I LCK + A ++ + +N+L+ D + L
Sbjct: 257 PNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLM---------------IQGGVR 118
++M + ++ DVVT ++++ LCK+R++DEA + + M I
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTL 376
Query: 119 PDAFCEI---------------------NIVAYGCLIDGLCKIGKLKNARELSQSLTRAG 157
D C++ N V Y CLIDG C+ GKL+ A+E+ +
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 158 LMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVI 217
+ PNVVT N + +C ++ A F+DME +GV N V + TL+ + + K +
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 218 ELLRSMDKRNVMPYASILSIIVDLL 242
M + P A I ++ L
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGL 521
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ Y +I GLC+ A + ++K+ + +++ YN LI FC N+ +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+ +M G + D +T+N ++ K++ + R+++ M + G+ P + YG
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP------TVTTYG 620
Query: 132 CLIDGLCKIGKLKNARELSQSL-TRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEV 190
+ID C +G+L A +L + + + + PN V YNI I+A +A L +M++
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 191 KGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
K V PN + L K + +++L+ M +++ P + I+++ L
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 7/206 (3%)
Query: 17 VTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIE 76
+ YN +I C + +K E+ M+ E P+ +TYN+LI F D E + +
Sbjct: 547 LAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 77 MMDRGLQSDVVTFNVIMDELCKNRKMDEATRLL-DLMIQGGVRPDAFCEINIVAYGCLID 135
M + GL V T+ ++D C ++DEA +L D+ + V P N V Y LI+
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP------NTVIYNILIN 660
Query: 136 GLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAP 195
K+G A L + + + PNV TYN L Q + L +M + P
Sbjct: 661 AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP 720
Query: 196 NCVIFTTLMPSFIRKNETSKVIELLR 221
N + LM +E K+ + ++
Sbjct: 721 NQITMEILMERLSGSDELVKLRKFMQ 746
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+++TYNT+I K + + + QM+++ ++P V TY ++I +C + +EA
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 73 LFIEMMDRGLQSDV----VTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
LF +M GL S V V +N++++ K +A L + M VRP N+
Sbjct: 638 LFKDM---GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP------NVE 688
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDK 180
Y L L + + + +L + PN +T I + L +++ K
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 33 DKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVI 92
DK L+ K++NI VV N LI F N++ L E +D +++ V NV+
Sbjct: 134 DKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQS-VLVYERLDSNMKNSQVR-NVV 191
Query: 93 MDELCKNRKMDEATRLLDLMIQG-GVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
+D L +N +D+A ++LD M+Q V P +IV + L K+ L
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKII---ALIS 248
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
+ G+ PN V I +LC + + + A D+ D+ F L+ R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ S++ +L+ MD+ + P L I+++ L K+
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKS 342
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PNTV YN +I+ K G +A L +MK + + PNV TYN+L G L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQG 115
EM+++ + + +T ++M+ L + DE +L M QG
Sbjct: 710 MDEMVEQSCEPNQITMEILMERLSGS---DELVKLRKFM-QG 747
>sp|Q9LKU8|PP401_ARATH Pentatricopeptide repeat-containing protein At5g28460
OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1
Length = 766
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 122/229 (53%), Gaps = 6/229 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN VTYN +IDG C+ G ++ AKE+ +MK++ I PNVVT N+++ G C + N A
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
F++M G++ +VVT+ ++ C +++A + M++ G PDA Y
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA------KIYY 515
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LI GLC++ + +A + + L G +++ YN+ I C+ +K +++ DME +
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
G P+ + + TL+ F + + V ++ M + + P + ++D
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 122/242 (50%), Gaps = 13/242 (5%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMK-DENINPNVVTYNSLIHGFCYANDG 67
G V K +++ +NT+IDGLCK G + +A+EL ++MK +E PN VTYN LI G+C A
Sbjct: 363 GNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL 422
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
A+ + M + ++ +VVT N I+ +C++ ++ A M + GV+ N+
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG------NV 476
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHD---L 184
V Y LI C + ++ A + + AG P+ Y I LC Q+ + HD +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC---QVRRDHDAIRV 533
Query: 185 FLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
++ G + + + + L+ F KN KV E+L M+K P + + ++ K
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 245 NE 246
++
Sbjct: 594 HK 595
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 16/222 (7%)
Query: 10 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDEN------INPNVVTYNSLIHGFCY 63
V +P+ VT +I+ LCK VD+A E+F QM+ + I + + +N+LI G C
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 64 ANDGNEAEYLFIEM-MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAF 122
EAE L + M ++ + VT+N ++D C+ K++ A ++ M + ++P
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP--- 439
Query: 123 CEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAH 182
N+V ++ G+C+ L A + + G+ NVVTY IHA C+ ++KA
Sbjct: 440 ---NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 183 DLFLDMEVKGVAPNCVIFTTLMPSFI---RKNETSKVIELLR 221
+ M G +P+ I+ L+ R ++ +V+E L+
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 36/265 (13%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN+V I LCK + A ++ + +N+L+ D + L
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLM---------------IQGGVR 118
++M + ++ DVVT ++++ LCK+R++DEA + + M I
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 119 PDAFCEI---------------------NIVAYGCLIDGLCKIGKLKNARELSQSLTRAG 157
D C++ N V Y CLIDG C+ GKL+ A+E+ +
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 158 LMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVI 217
+ PNVVT N + +C ++ A F+DME +GV N V + TL+ + + K +
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 218 ELLRSMDKRNVMPYASILSIIVDLL 242
M + P A I ++ L
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGL 521
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C P+ Y +I GLC+ A + ++K+ + +++ YN LI FC N+ +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+ +M G + D +T+N ++ K++ + R+++ M + G+ P + YG
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP------TVTTYG 620
Query: 132 CLIDGLCKIGKLKNARELSQSL-TRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEV 190
+ID C +G+L A +L + + + + PN V YNI I+A +A L +M++
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 191 KGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLL 242
K V PN + L K + +++L+ M +++ P + I+++ L
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 7/206 (3%)
Query: 17 VTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIE 76
+ YN +I C + +K E+ M+ E P+ +TYN+LI F D E + +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 77 MMDRGLQSDVVTFNVIMDELCKNRKMDEATRLL-DLMIQGGVRPDAFCEINIVAYGCLID 135
M + GL V T+ ++D C ++DEA +L D+ + V P N V Y LI+
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP------NTVIYNILIN 660
Query: 136 GLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAP 195
K+G A L + + + PNV TYN L Q + L +M + P
Sbjct: 661 AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP 720
Query: 196 NCVIFTTLMPSFIRKNETSKVIELLR 221
N + LM +E K+ + ++
Sbjct: 721 NQITMEILMERLSGSDELVKLRKFMQ 746
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+++TYNT+I K + + + QM+++ ++P V TY ++I +C + +EA
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 73 LFIEMMDRGLQSDV----VTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
LF +M GL S V V +N++++ K +A L + M VRP N+
Sbjct: 638 LFKDM---GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP------NVE 688
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDK 180
Y L L + + + +L + PN +T I + L +++ K
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 33 DKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVI 92
DK L+ K++NI +V LI F N++ L E +D +++ V NV+
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQS-VLVYERLDSNMKNSQVR-NVV 191
Query: 93 MDELCKNRKMDEATRLLDLMIQG-GVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
+D L +N +D+A ++LD M+Q V P +IV + + L K+ L
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKII---ALIS 248
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
+ G+ PN V I +LC + + + A D+ D+ F L+ R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ S++ +L+ MD+ + P L I+++ L K+
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKS 342
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PNTV YN +I+ K G +A L +MK + + PNV TYN+L G L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 74 FIEMMDRGLQSDVVTFNVIM------DELCKNRK 101
EM+++ + + +T ++M DEL K RK
Sbjct: 710 MDEMVEQSCEPNQITMEILMERLSGSDELVKLRK 743
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 126/294 (42%), Gaps = 59/294 (20%)
Query: 3 NGNREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFC 62
N RE G C PN VTY +I K V A ELF M E PN+VTY++LI G C
Sbjct: 542 NEMREVG--CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 63 YANDGNEAEYLFIEMM----------------DRGLQSDVVTFNVIMDELCKNRKMDEAT 106
A +A +F M D + +VVT+ ++D CK+ +++EA
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 107 RLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGL-------- 158
+LLD M G CE N + Y LIDGLCK+GKL A+E+ ++ G
Sbjct: 660 KLLDAMSMEG------CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 159 ---------------------------MPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
PNVV Y I LC + D+A+ L ME K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
G PN V +T ++ F + +ELL M + V P +++D KN
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 125/235 (53%), Gaps = 8/235 (3%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C+PN + Y+ +IDGLCK G +D+A+E+ +M + + TY+SLI + + A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
+ +M++ +VV + ++D LCK K DEA +L+ +M + G +P N+V Y
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP------NVVTYT 783
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
+IDG IGK++ EL + + G+ PN VTY + I C + +D AH+L +M+
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
+ + ++ F E + + LL + + + P+ S+ +++D L+K +
Sbjct: 844 HWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 124/240 (51%), Gaps = 10/240 (4%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
+ TY ++D CK G +++A++ F +M++ PNVVTY +LIH + A + A LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDA---FCEI------ 125
M+ G ++VT++ ++D CK ++++A ++ + M PD F +
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 126 -NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDL 184
N+V YG L+DG CK +++ AR+L +++ G PN + Y+ I LC ++D+A ++
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 185 FLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+M G +++L+ + + ++L M + + P I + ++D L K
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 109/238 (45%), Gaps = 29/238 (12%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
C PN V Y +IDGLCK G D+A +L M+++ PNVVTY ++I GF
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQ-------GGVRP----- 119
L M +G+ + VT+ V++D CKN +D A LL+ M Q G R
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Query: 120 -DAFCEI--------------NIVAYGCLIDGLCKIGKLKNARELSQSLT--RAGLMPNV 162
F E + Y LID L K +L+ A L + + A L+
Sbjct: 860 NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919
Query: 163 VTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELL 220
TYN I +LC +++ A LF +M KGV P F +L+ R ++ S+ + LL
Sbjct: 920 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 14 PNTVTYNTIIDGLCKEG------FVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDG 67
P V YN +I +C + +D A++ + +M + N + +S C A
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
+A + EM+ +G D T++ +++ LC KM+ A L + M +GG+ D +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY----- 519
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
Y ++D CK G ++ AR+ + G PNVVTY IHA +++ A++LF
Sbjct: 520 -TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSM 223
M +G PN V ++ L+ + + K ++ M
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 35/271 (12%)
Query: 5 NREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA 64
NR C PN VTY+T++ G + + + K + M E P+ +NSL+H +C +
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385
Query: 65 NDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRK------MDEATRLLDLMIQGGV- 117
D + A L +M+ G V +N+++ +C ++ +D A + M+ GV
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 118 ------------------RPDAFCEI----------NIVAYGCLIDGLCKIGKLKNAREL 149
AF I + Y +++ LC K++ A L
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 150 SQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIR 209
+ + R GL+ +V TY I + + C +++A F +M G PN V +T L+ ++++
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 210 KNETSKVIELLRSMDKRNVMPYASILSIIVD 240
+ S EL +M +P S ++D
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALID 596
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 9/231 (3%)
Query: 20 NTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMD 79
N ++ C+ G A E ++KD P+ TYN LI F A+ + A + EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 80 RGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCK 139
L+ D T LCK K EA L L+ PD V Y LI GLC+
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDT------VFYTKLISGLCE 314
Query: 140 IGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVI 199
+ A + + +PNVVTY+ + N +Q+ + + M ++G P+ I
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 200 FTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEISLN 250
F +L+ ++ + S +LL+ M K MP + +I++ + ++ SLN
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMK--DENINPNVVTYNSLIHGFCYANDGNEAE 71
P Y +ID L K ++ A L ++ + TYNSLI C AN A
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLM 112
LF EM +G+ ++ +F ++ L +N K+ EA LLD +
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 127/234 (54%), Gaps = 6/234 (2%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
CKPN TY +IDGLC++G +++A + +M + I P+V+TYN+LI+G+C A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYG 131
L M R + +V TFN +M+ LC+ K +A LL M+ G+ PD IV+Y
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD------IVSYN 445
Query: 132 CLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK 191
LIDGLC+ G + A +L S+ + P+ +T+ I+A C + D A M K
Sbjct: 446 VLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRK 505
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
G++ + V TTL+ + +T + +L ++ K ++ L++I+D+L K
Sbjct: 506 GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 559
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 29/248 (11%)
Query: 10 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNE 69
V C PN+V+Y+ +I GLC+ G +++A L QM ++ P+ TY LI C ++
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 70 AEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD--------- 120
A LF EM+ RG + +V T+ V++D LC++ K++EA + M++ + P
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 121 ----------AF----------CEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMP 160
AF C+ N+ + L++GLC++GK A L + + GL P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 161 NVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELL 220
++V+YN+ I LC + M+ A+ L M + P+C+ FT ++ +F ++ + L
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 221 RSMDKRNV 228
M ++ +
Sbjct: 500 GLMLRKGI 507
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 39/273 (14%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ +TYN +I+G CK+G V A EL M+ PNV T+N L+ G C +A +L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPD---------AFCE 124
M+D GL D+V++NV++D LC+ M+ A +LL M + PD AFC+
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 125 --------------------INIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVT 164
++ V LIDG+CK+GK ++A + ++L + ++ +
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 165 YNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMD 224
N+ + L ++ + + + G+ P+ V +TTL+ IR + + +L M
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 225 KRNVMPYASILSIIVDLLVKNEISLNSIPQFNR 257
+P +II+ N + QF R
Sbjct: 609 LSGCLPNVYPYTIII----------NGLCQFGR 631
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 44/265 (16%)
Query: 17 VTYNTIIDGLCKEGFVDKAKELFLQ----------------------------------- 41
+ Y TI++ LCK G+ + A E+F+
Sbjct: 196 IDYRTIVNALCKNGYTEAA-EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 42 --MKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKN 99
K+ PN V+Y+ LIHG C EA L +M ++G Q T+ V++ LC
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 100 RKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLM 159
+D+A L D MI G +P N+ Y LIDGLC+ GK++ A + + + + +
Sbjct: 315 GLIDKAFNLFDEMIPRGCKP------NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 160 PNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIEL 219
P+V+TYN I+ C D ++ A +L ME + PN F LM R + K + L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 220 LRSMDKRNVMPYASILSIIVDLLVK 244
L+ M + P ++++D L +
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCR 453
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 130/259 (50%), Gaps = 33/259 (12%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ V+YN +IDGLC+EG ++ A +L M +I P+ +T+ ++I+ FC + A
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGV--RPDAF--------- 122
M+ +G+ D VT ++D +CK K +A +L+ +++ + P +
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 123 -CEI-----------------NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVT 164
C++ ++V Y L+DGL + G + + + + + +G +PNV
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Query: 165 YNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMD 224
Y I I+ LC ++++A L M+ GV+PN V +T ++ ++ + + +E +R+M
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 225 KR----NVMPYASILSIIV 239
+R N Y+S+L V
Sbjct: 679 ERGYELNDRIYSSLLQGFV 697
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
N Y++++ L K A + +M+ + ++ Y ++++ C AE
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
+++ G D ++ C+ + +A ++ D+M + + C N V+Y LI
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSK-----EVTCAPNSVSYSILI 273
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
GLC++G+L+ A L + G P+ TY + I ALC+ +DKA +LF +M +G
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333
Query: 195 PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
PN +T L+ R + + + R M K + P
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 120/246 (48%), Gaps = 26/246 (10%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDG--NE 69
C PN Y II+GLC+ G V++A++L M+D ++PN VTY ++ G Y N+G +
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG--YVNNGKLDR 669
Query: 70 AEYLFIEMMDRGLQ-SDVVTFNVIMDELCKNRKMD--EATRLLDLMIQGGVRPDAFCE-I 125
A M++RG + +D + +++ + + +D E + + D+ ++ P+ E I
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR-ETDPECINELI 728
Query: 126 NIVAY--GC-------LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDE 176
++V GC L+ LCK G+ + +L Q++ G+ +I + + C+ +
Sbjct: 729 SVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKK 787
Query: 177 QMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSK----VIELLRS---MDKRNVM 229
+ K +L + G P+ F ++ ++ + + V+ELL S ++K V+
Sbjct: 788 KHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVL 847
Query: 230 PYASIL 235
Y L
Sbjct: 848 TYVECL 853
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 33 DKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVI 92
D+ +E+F N Y+SL+ + G A + M G ++ + I
Sbjct: 148 DELREVF------GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTI 201
Query: 93 MDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQS 152
++ LCKN + A + +++ G D+ + L+ G C+ L++A ++
Sbjct: 202 VNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTS------LLLGFCRGLNLRDALKVFDV 255
Query: 153 LTR-AGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
+++ PN V+Y+I IH LC ++++A L M KG P+ +T L+ + +
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
K L M R P ++++D L ++
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRD 349
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 123/230 (53%), Gaps = 10/230 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ TYNTII G+CKEG VD+A E+ ++ + P+V++YN L+ E E
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L +M +VVT+++++ LC++ K++EA LL LM + G+ PDA+ +Y
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY------SYDP 373
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI C+ G+L A E +++ G +P++V YN + LC + + D+A ++F + G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP----YASILSII 238
+PN + T+ + + + + ++ M + P Y S++S +
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 8/233 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+TVTYN +I LC G +D A ++ Q+ +N P V+TY LI +EA L
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLL-DLMIQGGVRPDAFCEINIVAYGC 132
EM+ RGL+ D+ T+N I+ +CK +D A ++ +L ++G CE ++++Y
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG-------CEPDVISYNI 303
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
L+ L GK + +L + PNVVTY+I I LC D ++++A +L M+ KG
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
+ P+ + L+ +F R+ IE L +M +P + ++ L KN
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 6/220 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+P+ YN +I+G CK +D A + +M+ ++ +P+ VTYN +I C + A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+ +++ Q V+T+ ++++ +DEA +L+D M+ G++PD F Y
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF------TYNT 268
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+I G+CK G + A E+ ++L G P+V++YNI + AL N + ++ L M +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYA 232
PN V ++ L+ + R + + + LL+ M ++ + P A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 6/233 (2%)
Query: 8 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDG 67
F C PN VTY+ +I LC++G +++A L MK++ + P+ +Y+ LI FC
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
+ A M+ G D+V +N ++ LCKN K D+A + + + G P N
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP------NS 438
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
+Y + L G A + + G+ P+ +TYN I LC + +D+A +L +D
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
M P+ V + ++ F + + I +L SM P + +++++
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 57 LIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGG 116
+ H C + + E+ +L M+ +G DV+ ++ R + +A R+++++ + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 117 VRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDE 176
+PD F AY LI+G CK+ ++ +A + + P+ VTYNI I +LC+
Sbjct: 155 -QPDVF------AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 177 QMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
++D A + + P + +T L+ + + + + ++L+ M R + P
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 261
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 92 IMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
I C++ E+ LL+ M++ G PD ++ LI G + + A + +
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPD------VILCTKLIKGFFTLRNIPKAVRVME 148
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
L + G P+V YN I+ C ++D A + M K +P+ V + ++ S +
Sbjct: 149 ILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVD 240
+ +++L + N P +I+++
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIE 236
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 125/249 (50%), Gaps = 9/249 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN V + T++DG CK + A+ LF+ M ++PN+ YN LIHG C + + EA L
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
EM L DV T+ ++++ LC ++ EA RL M + P + Y L
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS------ATYNSL 415
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I G CK ++ A +L +T +G+ PN++T++ I CN + A L+ +M +KG+
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN---EISLN 250
P+ V +T L+ + ++ + + L M + + P + +VD K ++++
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 251 SIPQFNRQK 259
+ N+Q+
Sbjct: 536 FYQENNQQR 544
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 120/239 (50%), Gaps = 8/239 (3%)
Query: 6 REFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAN 65
++ GV+ PN TY+ +IDG CK G V +A L+ ++ + PNVV + +L+ GFC A
Sbjct: 261 KKHGVL--PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR 318
Query: 66 DGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEI 125
+ A LF+ M+ G+ ++ +N ++ CK+ M EA LL M + PD F
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF--- 375
Query: 126 NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLF 185
Y LI+GLC ++ A L Q + + P+ TYN IH C + M++A DL
Sbjct: 376 ---TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 186 LDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+M GV PN + F+TL+ + + + L M + ++P + ++D K
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 119/228 (52%), Gaps = 6/228 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN Y I LC++ +++A+++F MK + PN+ TY+++I G+C + +A
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L+ E++ L +VV F ++D CK R++ A L M++ GV P N+ Y C
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP------NLYVYNC 344
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI G CK G + A L + L P+V TY I I+ LC ++Q+ +A+ LF M+ +
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
+ P+ + +L+ + ++ + ++L M V P S ++D
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 6/217 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P++ TYN++I G CKE +++A +L +M + PN++T+++LI G+C D A L
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+ EM +G+ DVVT+ ++D K M EA RL M++ G+ P N + CL
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP------NDHTFACL 520
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DG K G+L A + Q + N V + I LC + + +A F DM G+
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
P+ + +++ +++ + + L M K ++P
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP 617
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ Y + K+G K ++L +M I PNV Y I C N EAE +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
F M G+ ++ T++ ++D CK + +A L ++ + P N+V +G L
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP------NVVVFGTL 310
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+DG CK +L AR L + + G+ PN+ YN IH C M +A L +ME +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
+P+ +T L+ +++ ++ L + M + P ++ + ++
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 7/199 (3%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN +T++T+IDG C + A L+ +M + I P+VVTY +LI + EA
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L+ +M++ G+ + TF ++D K ++ A +D + + + N V + C
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA---IDFYQENNQQRSCW---NHVGFTC 554
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+GLC+ G + A + G+ P++ +Y + ++++ L DM G
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614
Query: 193 VAPNCVIFTTLMPSFIRKN 211
+ PN ++ L+ F + N
Sbjct: 615 ILPNLLV-NQLLARFYQAN 632
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 42/208 (20%)
Query: 77 MMDRGLQSDVVTFNV----------------IMDE-------------------LCKNRK 101
M+ RGL DV + V ++DE LC++ K
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 102 MDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPN 161
M+EA ++ +LM + GV P N+ Y +IDG CK G ++ A L + + A L+PN
Sbjct: 250 MEEAEKMFELMKKHGVLP------NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 162 VVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLR 221
VV + + C ++ A LF+ M GV PN ++ L+ + + + LL
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 222 SMDKRNVMPYASILSIIVD-LLVKNEIS 248
M+ N+ P +I+++ L ++++++
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVA 391
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 92 IMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQ 151
I++ L + R+ D LMI G+ PD I V + C K G +L
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDV--HIYFVLFQCCF----KQGLYSKKEKLLD 223
Query: 152 SLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKN 211
+T G+ PNV Y I I LC D +M++A +F M+ GV PN ++ ++ + +
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 212 ETSKVIELLRSMDKRNVMPYASILSIIVDLLVK 244
+ L + + ++P + +VD K
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 121/229 (52%), Gaps = 7/229 (3%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN T TI++G C+EG +++A F +MK+ ++PN+ +NSLI GF ND +
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+ M + G++ DVVTF+ +M+ M + M++GG+ PD I A+
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD------IHAFSI 641
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM-EVK 191
L G + G+ + A ++ + + G+ PNVV Y I C+ +M KA ++ M +
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 192 GVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
G++PN + TL+ F + K ELL+ M+ +NV+P + +I D
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 10 VVCKPNTV-----TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA 64
V+C T + +++GL + G +A +F + +E P+++TY +L+
Sbjct: 308 VICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQ 367
Query: 65 NDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCE 124
+ L ++ GL+ D + FN I++ ++ +D+A ++ + M + G +P A
Sbjct: 368 KHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTA--- 424
Query: 125 INIVAYGCLIDGLCKIGKL-KNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHD 183
+ LI G KIGKL +++R L L L PN T NI + A CN ++++A +
Sbjct: 425 ---STFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWN 481
Query: 184 LFLDMEVKGVAPNCVIFTTLMPSFIRKNET 213
+ M+ GV P+ V F TL ++ R T
Sbjct: 482 IVYKMQSYGVKPDVVTFNTLAKAYARIGST 511
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 43/265 (16%)
Query: 13 KPNTVTYNTIIDGLCKE-----------------------------------GFVDKAKE 37
KP+ +TY T++ L ++ G +D+A +
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 38 LFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEMM-DRGLQSDVVTFNVIMDEL 96
+F +MK+ P T+N+LI G+ E+ L M+ D LQ + T N+++
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 97 CKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNAREL-SQSLTR 155
C RK++EA ++ M GV+PD +V + L +IG A ++ +
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPD------VVTFNTLAKAYARIGSTCTAEDMIIPRMLH 524
Query: 156 AGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSK 215
+ PNV T ++ C + +M++A F M+ GV PN +F +L+ F+ N+
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG 584
Query: 216 VIELLRSMDKRNVMPYASILSIIVD 240
V E++ M++ V P S +++
Sbjct: 585 VGEVVDLMEEFGVKPDVVTFSTLMN 609
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 49/107 (45%)
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
L++GL + G+ + A + +L G P+++TY + AL + L +E G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
+ P+ ++F ++ + + +++ M + P AS + ++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLI 431
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/61 (21%), Positives = 33/61 (54%)
Query: 180 KAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
+AH +F + +G P+ + +TTL+ + R+ ++ L+ ++K + P + + I+
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 240 D 240
+
Sbjct: 397 N 397
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 6/226 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P T+I GLCK G KA EL+ Q ++ + T N+L+HG C A +EA +
Sbjct: 481 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 540
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
E++ RG D V++N ++ C +K+DEA LD M++ G++PD + Y L
Sbjct: 541 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY------TYSIL 594
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I GL + K++ A + R G++P+V TY++ I C E+ ++ + F +M K V
Sbjct: 595 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 654
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
PN V++ L+ ++ R S +EL M + + P ++ + ++
Sbjct: 655 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 8 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDG 67
G C + V+YNT+I G C + +D+A +M + P+ TY+ LI G N
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 604
Query: 68 NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINI 127
EA + + G+ DV T++V++D CK + +E D M+ V+P N
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP------NT 658
Query: 128 VAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLD 187
V Y LI C+ G+L A EL + + G+ PN TY I + ++++A LF +
Sbjct: 659 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 718
Query: 188 MEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
M ++G+ PN +T L+ + + + KV LLR M +NV P
Sbjct: 719 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 761
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 11/242 (4%)
Query: 8 FGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYA 64
F VVCK P+ + T I+ CK G V++A +LF +M++ + PNVVT+N++I G
Sbjct: 262 FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC 321
Query: 65 NDGNEAEYLFIE-MMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFC 123
+EA ++F E M++RG++ ++T+++++ L + +++ +A +L M + G P
Sbjct: 322 GRYDEA-FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP---- 376
Query: 124 EINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHD 183
N++ Y LID + G L A E+ + GL TYN I C + Q D A
Sbjct: 377 --NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 434
Query: 184 LFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLV 243
L +M G N FT+++ + + M RN+ P +L+ ++ L
Sbjct: 435 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 494
Query: 244 KN 245
K+
Sbjct: 495 KH 496
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 12/222 (5%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TY+ +IDG CK ++ +E F +M +N+ PN V YN LI +C + + A L
Sbjct: 621 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 680
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M +G+ + T+ ++ + +++EA L + M G+ P N+ Y L
Sbjct: 681 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP------NVFHYTAL 734
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
IDG K+G++ L + + + PN +TY + I D + +A L +M KG+
Sbjct: 735 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASIL 235
P+ + + + ++++ V+E + D+ N YA+I+
Sbjct: 795 VPDSITYKEFIYGYLKQG---GVLEAFKGSDEEN---YAAII 830
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 10/225 (4%)
Query: 15 NTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLF 74
+T T N ++ GLC+ G +D+A + ++ + V+YN+LI G C +EA
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576
Query: 75 IEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLI 134
EM+ RGL+ D T+++++ L K++EA + D + G+ PD + Y +I
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY------TYSVMI 630
Query: 135 DGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVA 194
DG CK + + +E + + PN V YN I A C ++ A +L DM+ KG++
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 195 PNCVIFTTLMP--SFIRKNETSKVI--ELLRSMDKRNVMPYASIL 235
PN +T+L+ S I + E +K++ E+ + NV Y +++
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 31/263 (11%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN + YN +ID + G ++KA E+ M + ++ TYN+LI G+C + AE L
Sbjct: 376 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 435
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC- 132
EM+ G + +F ++ LC + D A R + M+ + P +++ C
Sbjct: 436 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 495
Query: 133 ----------------------------LIDGLCKIGKLKNARELSQSLTRAGLMPNVVT 164
L+ GLC+ GKL A + + + G + + V+
Sbjct: 496 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 555
Query: 165 YNITIHALCNDEQMDKAHDLFLDMEVK-GVAPNCVIFTTLMPSFIRKNETSKVIELLRSM 223
YN I C +++D+A +FLD VK G+ P+ ++ L+ N+ + I+
Sbjct: 556 YNTLISGCCGKKKLDEAF-MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614
Query: 224 DKRNVMPYASILSIIVDLLVKNE 246
+ ++P S+++D K E
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAE 637
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PNTV YN +I C+ G + A EL MK + I+PN TY SLI G + EA+
Sbjct: 655 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 714
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF EM GL+ +V + ++D K +M + LL M V P N + Y
Sbjct: 715 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP------NKITYTV 768
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHA 171
+I G + G + A L + G++P+ +TY I+
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 807
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 7 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAND 66
E+ + +PN++TYN ++ G CK G ++ AK LF +++ + ++ +YN + G
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341
Query: 67 GNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEIN 126
EAE + +M D+G+ + ++N++MD LCK + +A ++ LM + GV PDA
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA----- 396
Query: 127 IVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFL 186
V YGCL+ G C +GK+ A+ L Q + R +PN T NI +H+L ++ +A +L
Sbjct: 397 -VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 187 DMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
M KG + V ++ E K IE+++ M ++ + + L+ +
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSL 515
Query: 247 ISLNSIP 253
I N +P
Sbjct: 516 IENNCLP 522
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 12 CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAE 71
CKPN T+ ++ G CK G DK EL M+ + PN V YN+++ FC +++E
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 72 YLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLM----IQGGVRPDA------ 121
+ +M + GL D+VTFN + LCK K+ +A+R+ M G RP++
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297
Query: 122 ---FCEINIV--------------------AYGCLIDGLCKIGKLKNARELSQSLTRAGL 158
FC++ ++ +Y + GL + GK A + + +T G+
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357
Query: 159 MPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIE 218
P++ +YNI + LC + A + M+ GV P+ V + L+ + +
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 219 LLRSMDKRNVMPYASILSIIVDLLVK 244
LL+ M + N +P A +I++ L K
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWK 443
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 52/285 (18%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ +YN ++DGLCK G + AK + MK + P+ VTY L+HG+C + A+ L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 74 FIEMM-----------------------------------DRGLQSDVVTFNVIMDELCK 98
EMM ++G D VT N+I+D LC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 99 NRKMDEATRLLDLM-IQG------------GVRPDAFCEIN----IVAYGCLIDGLCKIG 141
+ ++D+A ++ M + G G+ D+ E N ++ Y L++GLCK G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 142 KLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFT 201
+ A+ L + L P+ V YNI IH C ++ A + DME KG + +
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 202 TLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
+L+ KN+ ++ L+ M ++ + P + + L + E
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 15/232 (6%)
Query: 4 GNREFGVV--------CKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYN 55
GN G+V C P+ +TY+T+++GLCK G +AK LF +M E + P+ V YN
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 56 SLIHGFCYANDGNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQG 115
IH FC + A + +M +G + T+N ++ L ++ E L+D M +
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 116 GVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCND 175
G+ P NI Y I LC+ K+++A L + + + PNV ++ I A C
Sbjct: 624 GISP------NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Query: 176 EQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRN 227
D A ++F + V +++ + + + K ELL ++ R
Sbjct: 678 PDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG 728
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 10/237 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ YN +++ KE V+ L+ M I P T+N LI C ++ + A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
LF EM ++G + + TF +++ CK D+ LL+ M GV P N V Y
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLP------NKVIYNT 222
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVK- 191
++ C+ G+ ++ ++ + + GL+P++VT+N I ALC + ++ A +F DME+
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 192 --GVA-PNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKN 245
G+ PN + + ++ F + L S+ + + + +I + LV++
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
>sp|A3KPF8|PP131_ARATH Pentatricopeptide repeat-containing protein At1g79080,
chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2
SV=1
Length = 576
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 6/214 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ Y +++ LCK G V A +L +M+D N VTYN+L+ G C N++
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
+M +GL + T++ +++ K R DEA +LLD +I G P N+V+Y L
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP------NLVSYNVL 252
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
+ G CK G+ +A L + L G NVV+YNI + LC D + ++A+ L +M+
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRN 227
AP+ V + L+ S T + +++L+ M K N
Sbjct: 313 APSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 10/230 (4%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
+PN V+YN ++ G CKEG D A LF ++ + NVV+YN L+ C EA
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANS 302
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
L EM VVT+N++++ L + + ++A ++L M +G + + +Y
Sbjct: 303 LLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQ----FRVTATSYNP 358
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
+I LCK GK+ + + PN TYN I +LC E K + F ++
Sbjct: 359 VIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN-AIGSLC--EHNSKVQEAFYIIQSLS 415
Query: 193 VAPNCV---IFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
C + +++ S RK T +LL M + P A S ++
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI 465
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 33/188 (17%)
Query: 81 GLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDA---------FCE------- 124
G + +V ++ +LCK ++ +A R+++LM+ G+ PDA C+
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 125 -------------INIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHA 171
N V Y L+ GLC +G L + + + L + GL PN TY+ + A
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 172 LCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMD----KRN 227
+ D+A L ++ VKG PN V + L+ F ++ T + L R + K N
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 228 VMPYASIL 235
V+ Y +L
Sbjct: 281 VVSYNILL 288
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 1 MANGNREFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHG 60
M+ GN +F V +YN +I LCKEG VD + +M PN TYN+ I
Sbjct: 342 MSKGNHQFRVT----ATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGS 396
Query: 61 FCYANDG-NEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRP 119
C N EA Y+ + ++ + ++ LC+ A +LL M + G P
Sbjct: 397 LCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDP 456
Query: 120 DAFCEINIVAYGCLIDGLCKIGKLKNARE-LSQSLTRAGLMPNVVTYNITIHALCNDEQM 178
DA Y LI GLC G A E LS P V +N I LC +
Sbjct: 457 DAH------TYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510
Query: 179 DKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSII 238
D A ++F M K PN + L+ ++E E+L + R V+ ++ I+
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIV 570
Query: 239 VDL 241
+
Sbjct: 571 MQF 573
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 109 LDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNIT 168
L+ ++ GG +P N+ L+ LCK +LK A + + + +G++P+ Y
Sbjct: 94 LESLVTGGHKP------NVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 169 IHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNV 228
++ LC + A L ME G N V + L+ ++ ++ + + ++ +
Sbjct: 148 VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Query: 229 MPYASILSIIVDLLVK 244
P A S +++ K
Sbjct: 208 APNAFTYSFLLEAAYK 223
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 6/228 (2%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN TY I G + A + +M++ + PN V LI+ +C EA
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGC 132
+ M+D+G+ D T+ V+M+ L KN K+D+A + M G+ PD F +YG
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF------SYGV 632
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI+G K+G ++ A + + GL PNV+ YN+ + C +++KA +L +M VKG
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
+ PN V + T++ + + + ++ L M + ++P + + + +VD
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 34/272 (12%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ +Y +I+G K G + KA +F +M +E + PNV+ YN L+ GFC + + +A+ L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAF----------- 122
EM +GL + VT+ I+D CK+ + EA RL D M G+ PD+F
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 123 -----------------CEINIVAYGCLIDGLCKIGK--LKNA---RELSQSLTRAGLMP 160
C + + LI+ + K GK LK R + S R G P
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KP 803
Query: 161 NVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELL 220
N VTYNI I LC + ++ A +LF M+ + P + +T+L+ + + +++ +
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 221 RSMDKRNVMPYASILSIIVDLLVKNEISLNSI 252
+ P + S+I++ +K ++ ++
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 36/258 (13%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
PN + YN ++ G C+ G ++KAKEL +M + ++PN VTY ++I G+C + D EA L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEA---------------------------- 105
F EM +GL D + ++D C+ ++ A
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF 779
Query: 106 ------TRLLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLM 159
T +L+ ++ G D F + N V Y +ID LCK G L+ A+EL + A LM
Sbjct: 780 GKTELKTEVLNRLMDGSF--DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 160 PNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIEL 219
P V+TY ++ + + +F + G+ P+ ++++ ++ +F+++ T+K + L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 220 LRSMDKRNVMPYASILSI 237
+ M +N + LSI
Sbjct: 898 VDQMFAKNAVDDGCKLSI 915
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ YN++I GL K +D+A+ ++M + + PN TY + I G+ A++ A+
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
EM + G+ + V +++E CK K+ EA M+ G+ DA Y L
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA------KTYTVL 598
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
++GL K K+ +A E+ + + G+ P+V +Y + I+ M KA +F +M +G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
PN +I+ L+ F R E K ELL M + + P A I+D
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 6/233 (2%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P Y ++I+G C+E V + EL ++MK NI + TY +++ G C + D + A +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCL 133
EM+ G + +VV + ++ +N + +A R+L M + G+ PD FC Y L
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC------YNSL 493
Query: 134 IDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGV 193
I GL K ++ AR + GL PN TY I + A +M GV
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 194 APNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
PN V+ T L+ + +K + + RSM + ++ A +++++ L KN+
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 11/231 (4%)
Query: 18 TYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIEM 77
TY +++GL K VD A+E+F +M+ + I P+V +Y LI+GF + +A +F EM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 78 MDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAYGCLIDGL 137
++ GL +V+ +N+++ C++ ++++A LLD M G+ P+A V Y +IDG
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA------VTYCTIIDGY 707
Query: 138 CKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAPNC 197
CK G L A L + GL+P+ Y + C +++A +F KG A +
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASST 766
Query: 198 VIFTTLMPSFIRKNETSKVIELL-RSMD---KRNVMPYASILSIIVDLLVK 244
F L+ + +T E+L R MD R P +I++D L K
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 114/224 (50%), Gaps = 9/224 (4%)
Query: 10 VVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAND 66
++CK P TY+ +IDGLCK ++ AK L ++M ++ + TY+ LI G +
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 67 GNEAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEIN 126
+ A+ L EM+ G+ ++ + + K M++A L D MI G+ P A
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA----- 382
Query: 127 IVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFL 186
AY LI+G C+ ++ EL + + ++ + TY + +C+ +D A+++
Sbjct: 383 -QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 187 DMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
+M G PN VI+TTL+ +F++ + + +L+ M ++ + P
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 8/222 (3%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGN 68
G+ KP Y+ I + KEG ++KAK LF M + P Y SLI G+C +
Sbjct: 342 GINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
+ L +EM R + T+ ++ +C + +D A ++ MI G RP N+V
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP------NVV 453
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
Y LI + + +A + + + G+ P++ YN I L ++MD+A ++M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMP 230
G+ PN + + +I +E + + ++ M + V+P
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KPN VTYN +ID LCKEG ++ AKELF QM++ N+ P V+TY SL++G Y G AE
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG--YDKMGRRAEM 859
Query: 73 --LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIVAY 130
+F E + G++ D + ++VI++ K +A L+D M D C+++I
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG-CKLSISTC 918
Query: 131 GCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALC 173
L+ G K+G+++ A ++ +++ R +P+ T I+ C
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 29/246 (11%)
Query: 9 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAND-- 66
G+ P ++D L + +D +++ M + N+ +V TY+ LI C A +
Sbjct: 179 GLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ 238
Query: 67 -------GNEAEY------------LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATR 107
E E+ L M+ +GL T++V++D LCK +++++A
Sbjct: 239 LGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKS 298
Query: 108 LLDLMIQGGVRPDAFCEINIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNI 167
LL M GV D Y LIDGL K A+ L + G+ Y+
Sbjct: 299 LLVEMDSLGVSLDNH------TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352
Query: 168 TIHALCNDEQMDKAHDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRN 227
I + + M+KA LF M G+ P + +L+ + R+ + ELL M KRN
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412
Query: 228 VM--PY 231
++ PY
Sbjct: 413 IVISPY 418
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 136/243 (55%), Gaps = 17/243 (6%)
Query: 7 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYAND 66
EF V P+ VTYNTI+ + K+G + KEL L MK + PN VTYN+L++G+C
Sbjct: 233 EFKV--NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 67 GNEAEYLFIEMMDR-GLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEI 125
EA + +E+M + + D+ T+N++++ LC M E L+D M ++PD
Sbjct: 291 LKEA-FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD----- 344
Query: 126 NIVAYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMD----KA 181
+V Y LIDG ++G AR+L + + G+ N VT+NI++ LC +E+ + K
Sbjct: 345 -VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV 403
Query: 182 HDLFLDMEVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDL 241
+L +++ G +P+ V + TL+ ++++ + S +E++R M ++ + L+ I+D
Sbjct: 404 KEL---VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 242 LVK 244
L K
Sbjct: 461 LCK 463
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 118/227 (51%), Gaps = 7/227 (3%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYL 73
P+ TYN +I+GLC G + + EL MK + P+VVTYN+LI G EA L
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 74 FIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLL-DLMIQGGVRPDAFCEINIVAYGC 132
+M + G++++ VT N+ + LCK K + TR + +L+ G PD IV Y
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD------IVTYHT 421
Query: 133 LIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKG 192
LI K+G L A E+ + + + G+ N +T N + ALC + ++D+AH+L +G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 193 VAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIV 239
+ V + TL+ F R+ + K +E+ M K + P S + ++
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 9/211 (4%)
Query: 17 VTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEYLFIE 76
VTY T+I G +E V+KA E++ +MK I P V T+NSLI G C+ A F E
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 77 MMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAF-CEINIVAYGCLID 135
+ + GL D TFN I+ CK ++++A + I+ +PD + C I L++
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI-------LLN 599
Query: 136 GLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDMEVKGVAP 195
GLCK G + A +L + + VTYN I A C D+++ +A+DL +ME KG+ P
Sbjct: 600 GLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEP 658
Query: 196 NCVIFTTLMPSFIRKNETSKVIELLRSMDKR 226
+ + + + + + S+ ELL+ +
Sbjct: 659 DRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 13 KPNTVTYNTIIDGLCKE----GFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGN 68
K N VT+N + LCKE K KEL + +P++VTY++LI + D +
Sbjct: 377 KANQVTHNISLKWLCKEEKREAVTRKVKEL---VDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 69 EAEYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
A + EM +G++ + +T N I+D LCK RK+DEA LL+ + G D V
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE------V 487
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
YG LI G + K++ A E+ + + + P V T+N I LC+ + + A + F ++
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNEIS 248
G+ P+ F +++ + ++ K E K + P +I+++ L K ++
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 249 LNSIPQFN 256
++ FN
Sbjct: 608 EKALNFFN 615
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 10/238 (4%)
Query: 13 KPNTVTYNTIIDGLCK--EGF-VDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNE 69
KPN +T NT++ GL + F + A+E+F M ++ NV T+N L++G+C +
Sbjct: 163 KPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLED 222
Query: 70 AEYLFIEMMDR-GLQSDVVTFNVIMDELCKNRKMDEATRLLDLMIQGGVRPDAFCEINIV 128
A + M+ + D VT+N I+ + K ++ + LL M + G+ P N V
Sbjct: 223 ALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVP------NRV 276
Query: 129 AYGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDM 188
Y L+ G CK+G LK A ++ + + + ++P++ TYNI I+ LCN M + +L M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 189 EVKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVDLLVKNE 246
+ + P+ V + TL+ + + +L+ M+ V +I + L K E
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE 394
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 14 PNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDG---NEA 70
P+ ++ + EG A ++F +M + PN++T N+L+ G + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 71 EYLFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLLDLMI-QGGVRPDAFCEINIVA 129
+F +M+ G+ +V TFNV+++ C K+++A +L+ M+ + V PD V
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN------VT 242
Query: 130 YGCLIDGLCKIGKLKNARELSQSLTRAGLMPNVVTYNITIHALCNDEQMDKAHDLFLDME 189
Y ++ + K G+L + +EL + + GL+PN VTYN ++ C + +A + M+
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 190 VKGVAPNCVIFTTLMPSFIRKNETSKVIELLRSMDKRNVMPYASILSIIVD 240
V P+ + L+ + +EL+ +M + P + ++D
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 21/159 (13%)
Query: 13 KPNTVTYNTIIDGLCKEGFVDKAKELFLQMKDENINPNVVTYNSLIHGFCYANDGNEAEY 72
KP+ T N +++GLCKEG +KA F + +E + VTYN++I FC EA
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYD 646
Query: 73 LFIEMMDRGLQSDVVTFNVIMDELCKNRKMDEATRLL------------DLMIQGGVRP- 119
L EM ++GL+ D T+N + L ++ K+ E LL DL ++ P
Sbjct: 647 LLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPA 706
Query: 120 --DAFCEINI--VAYGCLIDGLCKIGKLKNARELSQSLT 154
++ E+N +AY +ID LC G+LK E S+S T
Sbjct: 707 TSESKEELNTEAIAYSDVIDELCSRGRLK---EHSRSYT 742
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,402,784
Number of Sequences: 539616
Number of extensions: 3589681
Number of successful extensions: 16411
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 9095
Number of HSP's gapped (non-prelim): 3034
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)