BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036732
(266 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224141043|ref|XP_002323884.1| predicted protein [Populus trichocarpa]
gi|118481933|gb|ABK92900.1| unknown [Populus trichocarpa]
gi|222866886|gb|EEF04017.1| predicted protein [Populus trichocarpa]
Length = 267
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/266 (78%), Positives = 231/266 (86%), Gaps = 5/266 (1%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS CLAG+V L N+SLK ++ SE SDD+ SSVVSREE LECPICWESFN+VENVP
Sbjct: 1 MWNFASKCLAGSVSL-NNSLKPAQVPSEYSDDEASSVVSREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFR+VY+GNLKFPRKNY
Sbjct: 60 YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES NGDR KSH FCED+QP SS + GNQ +RGN RRGQ Y HH EP
Sbjct: 120 FLLWMVESKNGDREKSHGTFCEDQQPHWSSDSNLALGNQASRGNIRRGQ----YVHHAEP 175
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ +N DH H +YL V RIHSSL+KSL+FFVHLTAKFPLV+IFLLI++YAIPASAAILAL
Sbjct: 176 SEANHDHNHVNSYLNVRRIHSSLQKSLVFFVHLTAKFPLVIIFLLIILYAIPASAAILAL 235
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 236 YILITVLFALPSFLILYFAYPSLDWL 261
>gi|225457307|ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241642 [Vitis vinifera]
Length = 268
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/267 (74%), Positives = 224/267 (83%), Gaps = 6/267 (2%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS L+G GLKND LK ++A SECSDD++S+ SREE LECPICWESFN+VENVP
Sbjct: 1 MWNFASNALSGTNGLKNDLLKPNQAPSECSDDEISTNTSREEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNC+LGLQWAVVKFPTLP+QLP FISCPWCNLLSFR+VYKGNL FPRKN+
Sbjct: 61 YVLWCGHTLCKNCVLGLQWAVVKFPTLPIQLPFFISCPWCNLLSFRLVYKGNLTFPRKNF 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMNGDR KSHS FC D QP SS+ + GNQ + NHRR Y H PE
Sbjct: 121 FLLWMVESMNGDRGKSHSSFC-DHQPGWSSNRNLIIGNQGSHVNHRRPP----YSHLPEQ 175
Query: 181 AGSNRDHLHATN-YLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILA 239
+ SN D H N +L +ER+H S+RKSL+FFVHLTAKFPLV+IFLLIV+YAIPASAAILA
Sbjct: 176 SESNHDGGHLINRFLNIERLHLSVRKSLVFFVHLTAKFPLVIIFLLIVLYAIPASAAILA 235
Query: 240 LYILVTILFALPSFLILYFAYPSLDWL 266
LYIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 236 LYILITVLFALPSFLILYFAYPSLDWL 262
>gi|359806827|ref|NP_001241055.1| uncharacterized protein LOC100809368 [Glycine max]
gi|255644418|gb|ACU22714.1| unknown [Glycine max]
Length = 264
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/266 (76%), Positives = 224/266 (84%), Gaps = 8/266 (3%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS C+AG VGLKNDS K + +ASECSDD+ +SV+ REE LECPICWESFN+VENVP
Sbjct: 1 MWNFASNCIAGTVGLKNDS-KPTHSASECSDDE-NSVIGREEGLECPICWESFNIVENVP 58
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFR+VY+GNLKFPRKNY
Sbjct: 59 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 118
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMNGDR KSHS FC D Q S + T G+Q++ GN RRG HPE
Sbjct: 119 FLLWMVESMNGDRGKSHSPFCGDNQ-QHSIKDNLTMGSQVSHGNLRRG-----LVRHPET 172
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ SN+ H + N+L ER H LRKSLIFFV LTAKFPLV+IFLLIV+YAIPASAAILAL
Sbjct: 173 SSSNQYHGNTGNHLNTERFHVYLRKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILAL 232
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y+LVTILFALPSFLILYF+YPSLDWL
Sbjct: 233 YVLVTILFALPSFLILYFSYPSLDWL 258
>gi|356573143|ref|XP_003554723.1| PREDICTED: uncharacterized protein LOC100815196 [Glycine max]
Length = 264
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/266 (75%), Positives = 222/266 (83%), Gaps = 8/266 (3%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS C+AG VGLKNDS K + +ASECSDD+ +SV+ REE LECPICWESFN+VENVP
Sbjct: 1 MWNFASNCIAGTVGLKNDS-KPTHSASECSDDE-TSVIGREEGLECPICWESFNIVENVP 58
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL+SFR+VY+GNLKFPRKNY
Sbjct: 59 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLMSFRLVYRGNLKFPRKNY 118
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMNGDR KSHS FC D Q S +T G+Q++ GN RRGQ HPE
Sbjct: 119 FLLWMVESMNGDRGKSHSPFCSDNQQHSIKDNLTT-GSQVSHGNLRRGQ-----VCHPET 172
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
SN H + N+L ER H L KSLIFFV LTAKFPLV+IFLLIV+YAIPASAAILAL
Sbjct: 173 LSSNLYHGNTGNHLNTERFHVYLWKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILAL 232
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y+LVTILFALPSFLILYF+YPSLDWL
Sbjct: 233 YVLVTILFALPSFLILYFSYPSLDWL 258
>gi|357496653|ref|XP_003618615.1| CCP [Medicago truncatula]
gi|217074134|gb|ACJ85427.1| unknown [Medicago truncatula]
gi|355493630|gb|AES74833.1| CCP [Medicago truncatula]
gi|388508162|gb|AFK42147.1| unknown [Medicago truncatula]
Length = 266
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/266 (73%), Positives = 224/266 (84%), Gaps = 6/266 (2%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS C+AGNVGLK DS + +ASECSDD+ +SVV REE LECP+CWESFN+VENVP
Sbjct: 1 MWNFASNCIAGNVGLKKDSSNPTHSASECSDDE-TSVVGREEGLECPVCWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGLQWA VKFPTLPVQLPLFISCPWCNLLSFR+VY+GNL+FPRKNY
Sbjct: 60 YVLWCGHTLCKNCILGLQWATVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLRFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVE MNGDRVKSHS C D Q +S G+ T G Q+N GN + GQ H P+
Sbjct: 120 FLLWMVEGMNGDRVKSHSTCCGDNQQQCASKGNLTLGGQVNHGNLQGGQ-----VHPPDT 174
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ S++ + N+L +ER+H SLRKSLIFFV LTAKFPL++IFLLI++YA+PASAAILAL
Sbjct: 175 SNSSQPRANTRNHLDMERVHISLRKSLIFFVQLTAKFPLIIIFLLIILYAVPASAAILAL 234
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YILVTILFALPSFLILYF+YPSLDWL
Sbjct: 235 YILVTILFALPSFLILYFSYPSLDWL 260
>gi|225452936|ref|XP_002284184.1| PREDICTED: uncharacterized protein LOC100262874 [Vitis vinifera]
Length = 269
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/267 (74%), Positives = 226/267 (84%), Gaps = 5/267 (1%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS C+AG+VGLKN+S K ++ ASECSDD+VSS +SREE LECPIC+ESFN+VENVP
Sbjct: 1 MWNFASNCIAGSVGLKNNSPKPTQVASECSDDEVSSNISREEGLECPICFESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGL WAVVKFPTLP+QLPLFISCPWCNLLSFR+VYKG+LKFPRKNY
Sbjct: 61 YVLWCGHTLCKNCILGLHWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGSLKFPRKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCED-RQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPE 179
FLLWM+ESMNGDR KSHS F D QP SS + G+Q+N RR Q + HH
Sbjct: 121 FLLWMLESMNGDREKSHSSFSGDHHQPVWSSDSNLALGSQVNHRILRREQ----FIHHSG 176
Query: 180 PAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILA 239
P+GSN + H NYLT+ER+HSSL KSL+FFV LTAKFPLVVI LLIV+YAIPASAAILA
Sbjct: 177 PSGSNHEDGHVNNYLTLERLHSSLHKSLVFFVQLTAKFPLVVILLLIVLYAIPASAAILA 236
Query: 240 LYILVTILFALPSFLILYFAYPSLDWL 266
LYIL+T+LFALPS L+LYFAYPSLDWL
Sbjct: 237 LYILITVLFALPSVLMLYFAYPSLDWL 263
>gi|388503120|gb|AFK39626.1| unknown [Lotus japonicus]
Length = 266
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/266 (72%), Positives = 228/266 (85%), Gaps = 6/266 (2%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS+C++G+VGLKND LK + +ASECSDD+ +S+ +REE LECPICWESFN+VENVP
Sbjct: 1 MWNFASSCISGSVGLKNDCLKPTHSASECSDDE-TSMTTREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
Y LWCGHTLCKNCILGLQWA+VKFPTLP+QLPLFISCPWCN+LSFR+V++GNLKFPRKNY
Sbjct: 60 YFLWCGHTLCKNCILGLQWAMVKFPTLPIQLPLFISCPWCNILSFRLVHQGNLKFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWM+ESMNGDR HS C D QP +ST G+QL+ GN RR Q HHPE
Sbjct: 120 FLLWMIESMNGDRATPHSTRCGDDQPVWPGKENSTMGSQLSLGNPRRRQ-----VHHPEL 174
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ SN+ + + N+L +ER+H+SLRKSL+ FVHLTAKFPL++IFLLIV+YAIPASAAILAL
Sbjct: 175 SNSNQFNGNTGNHLRMERLHTSLRKSLVLFVHLTAKFPLIIIFLLIVLYAIPASAAILAL 234
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YI++TILFALPSFLILYFAYPSLDWL
Sbjct: 235 YIVITILFALPSFLILYFAYPSLDWL 260
>gi|356526471|ref|XP_003531841.1| PREDICTED: uncharacterized protein LOC100811549 isoform 1 [Glycine
max]
gi|356526473|ref|XP_003531842.1| PREDICTED: uncharacterized protein LOC100811549 isoform 2 [Glycine
max]
Length = 267
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/267 (74%), Positives = 224/267 (83%), Gaps = 7/267 (2%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS+ +AG+VGLKNDS K + ASECSDD+ +S+V+REE LECPICWESFN+VENVP
Sbjct: 1 MWNFASSLIAGSVGLKNDSAKPTHPASECSDDE-TSMVTREERLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLS R+VY+GNLKFPRKNY
Sbjct: 60 YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSLRLVYRGNLKFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPA-SSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPE 179
FLLWMVESMNGDRVKSHS C D QP S T G+Q G RGQ H E
Sbjct: 120 FLLWMVESMNGDRVKSHSTVCGDHQPVWPIIKDSLTNGSQEGHGIPWRGQ-----VCHTE 174
Query: 180 PAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILA 239
+ SN+ H + +NYL++E +H+SLRKSL+ FVHL AKFPL++IFLLIV+YAIPASAAILA
Sbjct: 175 SSSSNQYHGNTSNYLSIETLHTSLRKSLVLFVHLIAKFPLIIIFLLIVLYAIPASAAILA 234
Query: 240 LYILVTILFALPSFLILYFAYPSLDWL 266
LYILVTILFALPSFLILYFAYPSLDWL
Sbjct: 235 LYILVTILFALPSFLILYFAYPSLDWL 261
>gi|449446247|ref|XP_004140883.1| PREDICTED: uncharacterized protein LOC101203968 isoform 1 [Cucumis
sativus]
gi|449446249|ref|XP_004140884.1| PREDICTED: uncharacterized protein LOC101203968 isoform 2 [Cucumis
sativus]
gi|449499448|ref|XP_004160820.1| PREDICTED: uncharacterized LOC101203968 isoform 1 [Cucumis sativus]
gi|449499451|ref|XP_004160821.1| PREDICTED: uncharacterized LOC101203968 isoform 2 [Cucumis sativus]
Length = 265
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/266 (72%), Positives = 220/266 (82%), Gaps = 7/266 (2%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS C+AG GLK+ S K+S A+ECSDD++SS REE LECPICWESFN+VENVP
Sbjct: 1 MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
+VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFR+VYKGNLKFP KNY
Sbjct: 60 HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVE++N +RVKSHS F D Q SG+S+ GNQ++ N RRG HH P
Sbjct: 120 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRG-HHVRQLDSQGP 177
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+N H H+ N +ER+ SSLRK L+FFVHLTAKFPLV+IFLLIV+YA+PASAAILAL
Sbjct: 178 NNAN-SHFHSFN---LERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILAL 233
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y+LVT+LFALPSFLILYFAYPSLDWL
Sbjct: 234 YVLVTVLFALPSFLILYFAYPSLDWL 259
>gi|255570218|ref|XP_002526069.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223534566|gb|EEF36263.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 264
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/266 (74%), Positives = 221/266 (83%), Gaps = 8/266 (3%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS C+AG+VG+ N S K ++AA E SDD+ SSVVSREE LECPICWESFN+VENVP
Sbjct: 1 MWNFASNCIAGSVGV-NSSPKLTQAALESSDDEASSVVSREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFR+VY+GNLKFPRKNY
Sbjct: 60 YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES N D K + ED QP SS + + GNQL+R N RR HH EP
Sbjct: 120 FLLWMVESKNEDGHKCQNTLYEDHQPLWSSDNNLSSGNQLSRSNIRR-------EHHSEP 172
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+G N DH + L + RIHSSL+KSL+FFVHLTAKFPLV+IFLLI++YAIPASAAILAL
Sbjct: 173 SGVNHDHNNGNILLNMGRIHSSLQKSLVFFVHLTAKFPLVIIFLLIILYAIPASAAILAL 232
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 233 YILITVLFALPSFLILYFAYPSLDWL 258
>gi|224080187|ref|XP_002306045.1| predicted protein [Populus trichocarpa]
gi|222849009|gb|EEE86556.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/266 (73%), Positives = 224/266 (84%), Gaps = 6/266 (2%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
M NFAS CLAG+V + N+S K ++ SE SDD+ SS SREE+LECPICWESFN+VENVP
Sbjct: 1 MLNFASNCLAGSVSM-NNSTKPTQVPSEYSDDEASSF-SREEALECPICWESFNIVENVP 58
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNC+LGLQWAVVKFPTLP++LPLFISCPWCNL SFR VY+GNLKFPRKNY
Sbjct: 59 YVLWCGHTLCKNCVLGLQWAVVKFPTLPIRLPLFISCPWCNLSSFRFVYRGNLKFPRKNY 118
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES NGDR KS FCED QP SS + G++++RGN RRG HY HH EP
Sbjct: 119 FLLWMVESKNGDRDKSPGTFCEDHQPHWSSDSNLAHGSRVSRGNIRRG----HYIHHSEP 174
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+G++ DH H +YL VERIHSSL+KSL FFV LTAKFPLV+IFLLI++Y IPASA+ILAL
Sbjct: 175 SGTHHDHNHVNSYLNVERIHSSLQKSLAFFVSLTAKFPLVIIFLLIILYVIPASASILAL 234
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 235 YILITVLFALPSFLILYFAYPSLDWL 260
>gi|356568704|ref|XP_003552550.1| PREDICTED: uncharacterized protein LOC100799346 isoform 1 [Glycine
max]
gi|356568706|ref|XP_003552551.1| PREDICTED: uncharacterized protein LOC100799346 isoform 2 [Glycine
max]
Length = 266
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/266 (72%), Positives = 222/266 (83%), Gaps = 6/266 (2%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS+ +AG+VGLKNDS K + +ASE SDD+ +S+VSREE LECPICWESFN+VENVP
Sbjct: 1 MWNFASSLIAGSVGLKNDSPKPTHSASEFSDDE-TSMVSREERLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGLQWAVV FPTLP++LPLFISCPWCNLLS R+VY+GNLKFP KNY
Sbjct: 60 YVLWCGHTLCKNCILGLQWAVVNFPTLPIRLPLFISCPWCNLLSLRLVYQGNLKFPHKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMNGDRVKSHS C D QP S T G+Q++ + + GQ HPE
Sbjct: 120 FLLWMVESMNGDRVKSHSTVCGDHQPVWPIIDSLTNGSQVSHDSLQGGQ-----VCHPES 174
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ SN H +NYL++E +H+SLRKSL+ FVHLTAKFPL++IFLLIV+YAIP AAILAL
Sbjct: 175 SSSNHYHGDTSNYLSIETLHTSLRKSLVLFVHLTAKFPLIIIFLLIVLYAIPVIAAILAL 234
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YILVTILFALPSFLILYFAYPSLDWL
Sbjct: 235 YILVTILFALPSFLILYFAYPSLDWL 260
>gi|296082977|emb|CBI22278.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 188/266 (70%), Positives = 211/266 (79%), Gaps = 31/266 (11%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS C+AG+VGLKN+S K ++ ASECSDD+VSS +SREE LECPIC+ESFN+VENVP
Sbjct: 1 MWNFASNCIAGSVGLKNNSPKPTQVASECSDDEVSSNISREEGLECPICFESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGL WAVVKFPTLP+QLPLFISCPWCNLLSFR+VYKG+LKFPRKNY
Sbjct: 61 YVLWCGHTLCKNCILGLHWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGSLKFPRKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWM+ESMNGDR KSHS + HH P
Sbjct: 121 FLLWMLESMNGDREKSHSS-------------------------------REQFIHHSGP 149
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+GSN + H NYLT+ER+HSSL KSL+FFV LTAKFPLVVI LLIV+YAIPASAAILAL
Sbjct: 150 SGSNHEDGHVNNYLTLERLHSSLHKSLVFFVQLTAKFPLVVILLLIVLYAIPASAAILAL 209
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YIL+T+LFALPS L+LYFAYPSLDWL
Sbjct: 210 YILITVLFALPSVLMLYFAYPSLDWL 235
>gi|255547293|ref|XP_002514704.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223546308|gb|EEF47810.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 269
Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 173/266 (65%), Positives = 206/266 (77%), Gaps = 3/266 (1%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS ++G +GLKND LK +A+SECSDD+ SREE LECPICWESFN+VENVP
Sbjct: 1 MWSFASRAISGTIGLKNDLLKLRQASSECSDDEPFVNNSREEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNC+LGLQ A+VK LP+QLP FISCPWCNLLS R+VYKGNL+FPRKNY
Sbjct: 61 YVLWCGHTLCKNCVLGLQRAIVKPLPLPIQLPFFISCPWCNLLSLRLVYKGNLRFPRKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES+NGDR KS+ F D QP SS+ + GNQ+ + +RR H +
Sbjct: 121 FLLWMVESLNGDRSKSYFSFHGDNQPVCSSNRNVPVGNQVGQVINRRALCTHPTR---QL 177
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
++ + +YL ER+ SLRKSL FVHLTAKFPL+ IFLL+++YAIPASAAILAL
Sbjct: 178 VPNHNEGWLNNSYLNAERLQLSLRKSLALFVHLTAKFPLIAIFLLVILYAIPASAAILAL 237
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YIL+T++FALPSFLILYFA PSLDWL
Sbjct: 238 YILITLVFALPSFLILYFALPSLDWL 263
>gi|15228658|ref|NP_189573.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|42572561|ref|NP_974376.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|27754358|gb|AAO22628.1| unknown protein [Arabidopsis thaliana]
gi|28394061|gb|AAO42438.1| unknown protein [Arabidopsis thaliana]
gi|70905103|gb|AAZ14077.1| At3g29270 [Arabidopsis thaliana]
gi|110739433|dbj|BAF01626.1| hypothetical protein [Arabidopsis thaliana]
gi|332644039|gb|AEE77560.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332644040|gb|AEE77561.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 263
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 202/271 (74%), Gaps = 27/271 (9%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWN AS+ L GN+G KND + A +ECSDDDVSSV S++E LECPICWESFN+VENVP
Sbjct: 9 MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFR+V++G L+FP KNY
Sbjct: 69 YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQ-----HHHHYH 175
F+LWMVE MNG+R +S G+ T GN +H R H+ H+
Sbjct: 129 FVLWMVERMNGER-------------RNSPGGAQTDGN----NDHTRETPSPCLHNRHHR 171
Query: 176 HHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASA 235
PEP+ S DH + + I +SLRKSL+FFV LTAKFPLVVIFLLI++YAIP SA
Sbjct: 172 SQPEPSRSVNDH-----RIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSA 226
Query: 236 AILALYILVTILFALPSFLILYFAYPSLDWL 266
AILA+YILVT+L ALPSFLILYFAYP LDWL
Sbjct: 227 AILAMYILVTLLLALPSFLILYFAYPCLDWL 257
>gi|11994767|dbj|BAB03123.1| RING zinc finger protein-like [Arabidopsis thaliana]
Length = 255
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 202/271 (74%), Gaps = 27/271 (9%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWN AS+ L GN+G KND + A +ECSDDDVSSV S++E LECPICWESFN+VENVP
Sbjct: 1 MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFR+V++G L+FP KNY
Sbjct: 61 YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQ-----HHHHYH 175
F+LWMVE MNG+R +S G+ T GN +H R H+ H+
Sbjct: 121 FVLWMVERMNGER-------------RNSPGGAQTDGNN----DHTRETPSPCLHNRHHR 163
Query: 176 HHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASA 235
PEP+ S DH + + I +SLRKSL+FFV LTAKFPLVVIFLLI++YAIP SA
Sbjct: 164 SQPEPSRSVNDH-----RIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSA 218
Query: 236 AILALYILVTILFALPSFLILYFAYPSLDWL 266
AILA+YILVT+L ALPSFLILYFAYP LDWL
Sbjct: 219 AILAMYILVTLLLALPSFLILYFAYPCLDWL 249
>gi|326517589|dbj|BAK03713.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/266 (63%), Positives = 196/266 (73%), Gaps = 13/266 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS +AG++ K K S + +CSDDD SS SREE LECPIC ESFN+VEN+P
Sbjct: 1 MWSFASNAIAGSIKKKAQPSKGSLSNPDCSDDDGSSCASREEGLECPICCESFNIVENIP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFR+VYKGNLKFPRKNY
Sbjct: 61 YVLWCGHTMCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGNLKFPRKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVE+MNG+R K H E+RQ SSG ++ QHH
Sbjct: 121 FLLWMVETMNGERAKFHFSGHEERQSVCPSSGGTS-----------SSQHHRRAPTARAE 169
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
S RD A N T SL+K ++ FV LTAKFPLV++FLLIV+YA+PASAA+L L
Sbjct: 170 TSSARDRNAAGN--TSNTASVSLQKLMVCFVQLTAKFPLVIMFLLIVLYAVPASAAVLLL 227
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y+LVT LFALPSFLILYFAYP+LDWL
Sbjct: 228 YVLVTFLFALPSFLILYFAYPTLDWL 253
>gi|125544396|gb|EAY90535.1| hypothetical protein OsI_12137 [Oryza sativa Indica Group]
Length = 267
Score = 339 bits (869), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 194/266 (72%), Gaps = 5/266 (1%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS+ +G KN + + +CSDD+ SS SREE LECPICWESFN+VENVP
Sbjct: 1 MWNFASSAWGSGLGKKNTP-NCTPSNGDCSDDEASSCTSREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGLQWA++K PT+P+QLP F+SCPWCNLLS R++YKGNL FPRKNY
Sbjct: 60 YVLWCGHTMCKNCILGLQWAIIKVPTVPIQLPFFVSCPWCNLLSLRIIYKGNLAFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVE MNG+R +S S ++Q SS S GN+ RR P
Sbjct: 120 FLLWMVEGMNGERARSRSAIHSEQQTTWLSSSSRASGNEGYSNPIRRPLPPPVETQSPSV 179
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+N H L ER+ +SLRKSL F VHLTAKFPLV IFLLIV+YAIPASAA++ L
Sbjct: 180 NHAN----HGVPILNAERVQASLRKSLSFLVHLTAKFPLVFIFLLIVLYAIPASAAVMLL 235
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 236 YILITVLFALPSFLILYFAYPSLDWL 261
>gi|115453623|ref|NP_001050412.1| Os03g0427100 [Oryza sativa Japonica Group]
gi|37718893|gb|AAR01764.1| expressed protein [Oryza sativa Japonica Group]
gi|108708932|gb|ABF96727.1| RING zinc finger protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708933|gb|ABF96728.1| RING zinc finger protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548883|dbj|BAF12326.1| Os03g0427100 [Oryza sativa Japonica Group]
gi|125586735|gb|EAZ27399.1| hypothetical protein OsJ_11347 [Oryza sativa Japonica Group]
gi|215767048|dbj|BAG99276.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 267
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 193/266 (72%), Gaps = 5/266 (1%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS+ +G KN + + +CSDD+ SS SREE LECPICWESFN+VENVP
Sbjct: 1 MWNFASSAWGSGLGKKNTP-NCTPSNGDCSDDEASSCTSREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGLQWA++K PT+P+QLP F+SCPWCNLLS R++YKGNL FPRKNY
Sbjct: 60 YVLWCGHTMCKNCILGLQWAIIKVPTVPIQLPFFVSCPWCNLLSLRIIYKGNLAFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVE MNG+R +S S ++Q SS S GN+ RR P
Sbjct: 120 FLLWMVEGMNGERARSRSAIHSEQQTTWLSSSSRASGNEGYSNPIRRPLPPPVETQSPSV 179
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+N H L ER+ + LRKSL F VHLTAKFPLV IFLLIV+YAIPASAA+L L
Sbjct: 180 NHAN----HGVPILNAERVQALLRKSLSFLVHLTAKFPLVFIFLLIVLYAIPASAAVLLL 235
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 236 YILITVLFALPSFLILYFAYPSLDWL 261
>gi|297815246|ref|XP_002875506.1| hypothetical protein ARALYDRAFT_484697 [Arabidopsis lyrata subsp.
lyrata]
gi|297321344|gb|EFH51765.1| hypothetical protein ARALYDRAFT_484697 [Arabidopsis lyrata subsp.
lyrata]
Length = 255
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/266 (63%), Positives = 199/266 (74%), Gaps = 17/266 (6%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWN AS+ L GN+G KN+ + A +ECSDDDVSSV S++E LECPICWESFN+VENVP
Sbjct: 1 MWNLASSYLTGNIGPKNEIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFR+V++G L+FP KNY
Sbjct: 61 YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
F+LWMVE MNG+R S P + + + N R H+ H+ PEP
Sbjct: 121 FVLWMVERMNGERRNS---------PVIAQNDGN---NNHTRETPSPCLHNRHHCSQPEP 168
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ S DH + + I +SLRKSL+FFV LTAKFPLVVIFLLI++YAIP SAAILA+
Sbjct: 169 SRSVNDH-----RIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAM 223
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
YILVT+L ALPSFLILYFAYP LDWL
Sbjct: 224 YILVTLLLALPSFLILYFAYPCLDWL 249
>gi|224121490|ref|XP_002318595.1| predicted protein [Populus trichocarpa]
gi|222859268|gb|EEE96815.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/267 (64%), Positives = 203/267 (76%), Gaps = 8/267 (2%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAAS-ECSDDDVSSVVSREESLECPICWESFNMVENV 59
M +FAS + G + LK+D LK +A S +CSDD+ S SRE+ LECPICWESFN+VENV
Sbjct: 1 MLDFASKFIRGTIRLKHDFLKPRQALSGQCSDDEPSLNSSREDRLECPICWESFNIVENV 60
Query: 60 PYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKN 119
PYVLWCGH+LCKNC+LGLQWA+VK PTLP+ LP FISCPWCN+LSFR+VYKG L+FP KN
Sbjct: 61 PYVLWCGHSLCKNCVLGLQWALVKLPTLPILLPFFISCPWCNMLSFRLVYKGILRFPCKN 120
Query: 120 YFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPE 179
YFLLWMVESMNGDR S S F D QP + + + T GNQ+N R H E
Sbjct: 121 YFLLWMVESMNGDR-SSFSSFHNDHQPVAPLNNNPTTGNQVNPEVGNR--HAMRVQIPSE 177
Query: 180 PAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILA 239
+ NRD +Y ER+H SLRKSL+FF H+TAKFPL+V+FLLIV+YAIP SAAILA
Sbjct: 178 QSLPNRD----PSYFNSERLHLSLRKSLVFFAHMTAKFPLIVMFLLIVLYAIPTSAAILA 233
Query: 240 LYILVTILFALPSFLILYFAYPSLDWL 266
LYIL+T++FALPSFLILYF+ PSLDWL
Sbjct: 234 LYILITLVFALPSFLILYFSLPSLDWL 260
>gi|242041809|ref|XP_002468299.1| hypothetical protein SORBIDRAFT_01g043230 [Sorghum bicolor]
gi|241922153|gb|EER95297.1| hypothetical protein SORBIDRAFT_01g043230 [Sorghum bicolor]
Length = 261
Score = 335 bits (860), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 166/266 (62%), Positives = 198/266 (74%), Gaps = 11/266 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS +AG++ K K S + +CSDD+VSS SREE L+CPICWESFN+VENVP
Sbjct: 1 MWSFASNAIAGSLKKKGQPSKCSISNPDCSDDEVSSCTSREEGLDCPICWESFNLVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGL WAVVKFP+LP+QLPLFISCPWCNLLSFR+VYKGNL+FPRKNY
Sbjct: 61 YVLWCGHTMCKNCILGLHWAVVKFPSLPIQLPLFISCPWCNLLSFRLVYKGNLRFPRKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMNG+R K HS E+ + SS + +Q R R +
Sbjct: 121 FLLWMVESMNGERAKFHSSNHEEHHSSWHSSAGTNSSHQHRRNATVRSE----------- 169
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ S R+ N + I +SL+K ++ F+ LTAKFPLV+IFLLIV+YA+PASAA+L L
Sbjct: 170 SSSARETSVVGNIFHTDNISASLQKLMVCFMQLTAKFPLVIIFLLIVLYAVPASAAVLVL 229
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y LVT LFALPSFLILYFAYPSLDWL
Sbjct: 230 YALVTFLFALPSFLILYFAYPSLDWL 255
>gi|294461951|gb|ADE76531.1| unknown [Picea sitchensis]
Length = 260
Score = 332 bits (851), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 167/266 (62%), Positives = 197/266 (74%), Gaps = 12/266 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS ++G +G K AS CSDD+ SS S EE LECPICWESFN+VENVP
Sbjct: 1 MWSFASNAISGTMGFKG------RQASVCSDDEASSRKSAEEKLECPICWESFNIVENVP 54
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNC+LGLQWA VKFPTLPVQLPLFISCPWC LLSFR+V+KG+LKFPRKN+
Sbjct: 55 YVLWCGHTLCKNCVLGLQWATVKFPTLPVQLPLFISCPWCQLLSFRLVWKGSLKFPRKNF 114
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMN +R + H D+ +++G + + NHR H H +
Sbjct: 115 FLLWMVESMNDER-RLHGSIGGDQGVLPTNAGLDSGSASILSANHRPCA---HVDHPSQR 170
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ D +H NY+ +H+S RKSL+ FV +TAKFPLV+IFLLIV+Y IPASAAILAL
Sbjct: 171 SNGIMDVVH--NYMNANMLHASFRKSLVIFVQMTAKFPLVIIFLLIVLYVIPASAAILAL 228
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y L+TILFALPSFLILYFAYPSLDWL
Sbjct: 229 YCLITILFALPSFLILYFAYPSLDWL 254
>gi|242035431|ref|XP_002465110.1| hypothetical protein SORBIDRAFT_01g032180 [Sorghum bicolor]
gi|241918964|gb|EER92108.1| hypothetical protein SORBIDRAFT_01g032180 [Sorghum bicolor]
Length = 267
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/270 (61%), Positives = 195/270 (72%), Gaps = 13/270 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW FAS A +G K + +++ SDD+ SS SREE LECPICWESFN+VENVP
Sbjct: 1 MWGFASNAWASGLG-KRSPPNCTSSSAAGSDDEASSCTSREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGLQWAV+K PT+P+QLP FI CPWCNLLS R++YKGNL FPRKNY
Sbjct: 60 YVLWCGHTMCKNCILGLQWAVIKVPTVPIQLPFFICCPWCNLLSLRILYKGNLTFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVE MNG+R +S ++Q SS S + GN RR H P P
Sbjct: 120 FLLWMVEGMNGERARSRPAIHSEQQTPWLSSSSRSNGNAGYSNPTRR--------HLPPP 171
Query: 181 ---AGSNRDHL-HATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAA 236
+ +N +H H L ER+ +SLRKSL F VHLTAKFPLV IFLLIV+YAIPASAA
Sbjct: 172 VDMSPTNANHSNHGVPLLNAERVQASLRKSLSFLVHLTAKFPLVFIFLLIVLYAIPASAA 231
Query: 237 ILALYILVTILFALPSFLILYFAYPSLDWL 266
+L LY+L+T+LFALPSFLILYFAYPSLDWL
Sbjct: 232 VLLLYVLITVLFALPSFLILYFAYPSLDWL 261
>gi|115451489|ref|NP_001049345.1| Os03g0211100 [Oryza sativa Japonica Group]
gi|108706802|gb|ABF94597.1| RING zinc finger protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113547816|dbj|BAF11259.1| Os03g0211100 [Oryza sativa Japonica Group]
gi|125542868|gb|EAY89007.1| hypothetical protein OsI_10489 [Oryza sativa Indica Group]
gi|125585363|gb|EAZ26027.1| hypothetical protein OsJ_09880 [Oryza sativa Japonica Group]
gi|215767247|dbj|BAG99475.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767261|dbj|BAG99489.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 260
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 200/269 (74%), Gaps = 18/269 (6%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS +AG++ K K S++ +CSDDDVSS SREE LECPICWESFN+VENVP
Sbjct: 1 MWSFASNAIAGSIRKKAQPSKCSQSNPDCSDDDVSSCASREEGLECPICWESFNLVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFR+VYKGNLKFPRKNY
Sbjct: 61 YVLWCGHTMCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGNLKFPRKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMNG+R K HS E+R S G G +H P P
Sbjct: 121 FLLWMVESMNGERAKFHSPSHEERHSLCPSGG---------------GPSSSQHHRRPAP 165
Query: 181 ---AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAI 237
+ S R+ A N I +SL+K ++ FV +TAKFPLV+IFLLIV+YA+PAS A+
Sbjct: 166 RTESASGRERSVAGNVFNTYSISASLQKIMLSFVQMTAKFPLVIIFLLIVLYAVPASVAV 225
Query: 238 LALYILVTILFALPSFLILYFAYPSLDWL 266
L LY+LVT+LFALPSFLILYFAYPSLDWL
Sbjct: 226 LVLYVLVTVLFALPSFLILYFAYPSLDWL 254
>gi|238014540|gb|ACR38305.1| unknown [Zea mays]
gi|413956604|gb|AFW89253.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 261
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/266 (62%), Positives = 197/266 (74%), Gaps = 11/266 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS +AG++ K K S + ++ SDD+VSS SREE L+CPICWESFN+VENVP
Sbjct: 1 MWSFASNAIAGSLKKKAQPSKCSISNADYSDDEVSSCTSREEGLDCPICWESFNLVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGL WAVVKFP+LP+QLPLFISCPWCNLLSFR+VYKGNL+FPRKNY
Sbjct: 61 YVLWCGHTMCKNCILGLHWAVVKFPSLPIQLPLFISCPWCNLLSFRLVYKGNLRFPRKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMNG R K HS ++ SS ++ +Q R N G
Sbjct: 121 FLLWMVESMNGGRAKFHSTNHDEHHSTWHSSAGTSSSHQ-QRRNAAVGSE---------- 169
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+ S R+ N + I +SL+K ++ F+ LTAKFPLV+IFLLIV+YA+PASAA+L L
Sbjct: 170 SSSGRETGVGRNIFHTDNISASLQKLMVCFMQLTAKFPLVIIFLLIVLYAVPASAAVLVL 229
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y LVT LFALPSFLILYFAYPSLDWL
Sbjct: 230 YALVTFLFALPSFLILYFAYPSLDWL 255
>gi|226506794|ref|NP_001152075.1| RING zinc finger protein-like [Zea mays]
gi|195652369|gb|ACG45652.1| RING zinc finger protein-like [Zea mays]
gi|223948587|gb|ACN28377.1| unknown [Zea mays]
gi|413955489|gb|AFW88138.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 272
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/275 (60%), Positives = 198/275 (72%), Gaps = 18/275 (6%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW FAS A +G K + +++ CSDD+ SS SREE LECPICWESFN+VENVP
Sbjct: 1 MWGFASNAWASGLG-KRSPPNCTSSSAACSDDEASSCTSREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNC+LGLQWAV+K PT+P+QLP F+ CPWCNLLS R++YKGNL FPRKNY
Sbjct: 60 YVLWCGHTLCKNCVLGLQWAVIKVPTVPMQLPFFVCCPWCNLLSLRILYKGNLTFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVE MNG+R +S +PA+ S + + + +R N G + H P P
Sbjct: 120 FLLWMVEGMNGERARS--------RPATHSEQHTPWLSSSSRANGNAGCSNPTRRHLPLP 171
Query: 181 ------AGSNRDHLH---ATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAI 231
+ +N +H + L ER+ +SLRKSL F VHLTAKFPLV IFLLIV+YAI
Sbjct: 172 PPVDTTSPTNANHANHGVPVPLLNAERVQASLRKSLSFLVHLTAKFPLVFIFLLIVLYAI 231
Query: 232 PASAAILALYILVTILFALPSFLILYFAYPSLDWL 266
PASAA+L LYIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 232 PASAAVLLLYILITVLFALPSFLILYFAYPSLDWL 266
>gi|194696566|gb|ACF82367.1| unknown [Zea mays]
gi|223942941|gb|ACN25554.1| unknown [Zea mays]
gi|414867298|tpg|DAA45855.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414867299|tpg|DAA45856.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 270
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 190/267 (71%), Gaps = 4/267 (1%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW FAS A + ++ + S +A+ SDD+ SS SREE LECPICWESFN+VENVP
Sbjct: 1 MWGFASNAWAAGLEKRSSPNRTSSSAAY-SDDEASSCTSREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
Y LWCGHT+CKNCILGLQWAV+K PT+P+QLP FI CPWCNLLS RV+YKGNL FPRKNY
Sbjct: 60 YALWCGHTMCKNCILGLQWAVIKVPTVPIQLPFFICCPWCNLLSPRVLYKGNLTFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGF-CEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPE 179
FLLWMVE MNG+R +S E P SSS S GN RR H
Sbjct: 120 FLLWMVEGMNGERARSRPAIRSEQHTPWLSSSSSVANGNAGCSNPTRR--HLPPPSVDTS 177
Query: 180 PAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILA 239
P +N + + L R+ +SLRKSL F VHLTAKFPLV +FLLIV+YAIPASAA+L
Sbjct: 178 PTNANHANYGGSPLLNAGRVQASLRKSLSFLVHLTAKFPLVFVFLLIVLYAIPASAAVLL 237
Query: 240 LYILVTILFALPSFLILYFAYPSLDWL 266
LYIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 238 LYILITVLFALPSFLILYFAYPSLDWL 264
>gi|226507657|ref|NP_001149802.1| RING zinc finger protein-like [Zea mays]
gi|195634763|gb|ACG36850.1| RING zinc finger protein-like [Zea mays]
Length = 261
Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 163/270 (60%), Positives = 192/270 (71%), Gaps = 19/270 (7%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS +AG++ K K S + ++ SDD+VSS SREE L+CPICWESFN+VENVP
Sbjct: 1 MWSFASNAIAGSLKKKAQPSKCSISNADYSDDEVSSCTSREEGLDCPICWESFNLVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHT+CKNCILGL WAVVKFP+LP+QLPLFISCPWCNLLSFR+VYKGNL+FPRKNY
Sbjct: 61 YVLWCGHTMCKNCILGLHWAVVKFPSLPIQLPLFISCPWCNLLSFRLVYKGNLRFPRKNY 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVESMNG R +S T + + RG Q H
Sbjct: 121 FLLWMVESMNGGR---------------QNSIPLTMTSIIPRGIQVPAQAPSHQQRRNAA 165
Query: 181 AG----SNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAA 236
G S R+ N + I +SL+K ++ F+ LTAKFPLV+IFLLIV+YA+PASAA
Sbjct: 166 VGSESSSGRETGVGRNIFHTDNISASLQKLMVCFMQLTAKFPLVIIFLLIVLYAVPASAA 225
Query: 237 ILALYILVTILFALPSFLILYFAYPSLDWL 266
+L LY LVT LFALPSFLILYFAYPSLDWL
Sbjct: 226 VLVLYALVTFLFALPSFLILYFAYPSLDWL 255
>gi|226505174|ref|NP_001147578.1| RING zinc finger protein-like [Zea mays]
gi|195612290|gb|ACG27975.1| RING zinc finger protein-like [Zea mays]
Length = 270
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 190/267 (71%), Gaps = 4/267 (1%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW FAS A + ++ + S +A+ SDD+ SS SREE LECPICWESFN+VENVP
Sbjct: 1 MWGFASNAWAAGLEKRSFPNRTSSSAAY-SDDEASSCTSREEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
Y LWCGHT+CKNCILGLQWAV+K PT+P+QLP FI CPWCNLLS RV+YKGNL FPRKNY
Sbjct: 60 YALWCGHTMCKNCILGLQWAVIKVPTVPIQLPFFICCPWCNLLSPRVLYKGNLTFPRKNY 119
Query: 121 FLLWMVESMNGDRVKSHSGF-CEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPE 179
FLLWMVE MNG+R +S E P SSS S GN RR H
Sbjct: 120 FLLWMVEGMNGERARSRPAIRSEQHTPWLSSSSSVANGNAGCSNPTRR--HLPPPSVDTS 177
Query: 180 PAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILA 239
P +N + + L R+ +SLRKSL F VHLTAKFPLV +FLLIV+YAIPASAA+L
Sbjct: 178 PTNANHANHGGSPLLNAGRVQASLRKSLSFLVHLTAKFPLVFVFLLIVLYAIPASAAVLL 237
Query: 240 LYILVTILFALPSFLILYFAYPSLDWL 266
LYIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 238 LYILITVLFALPSFLILYFAYPSLDWL 264
>gi|356499871|ref|XP_003518759.1| PREDICTED: uncharacterized protein LOC100499984 [Glycine max]
Length = 262
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/266 (60%), Positives = 192/266 (72%), Gaps = 11/266 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS L ++GLK S + S+ ++ECSDD+V S SR+E LECPICWESFN+VENVP
Sbjct: 2 MWSFASNALT-SIGLKRGSKQPSQTSAECSDDEVCSNASRDEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNCILGLQWAVVKFPT +++P FISCPWC+LLSFR++YKGNLK+P KN+
Sbjct: 61 YVLWCGHTLCKNCILGLQWAVVKFPTQQIKIPFFISCPWCHLLSFRIIYKGNLKYPCKNF 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES+NGDR K S C D QP S + G+Q+ N RR
Sbjct: 121 FLLWMVESLNGDRHKVFST-CTDNQPIWSPK-CNLLGSQVTNCNLRRAS----VSPCSRL 174
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
GSNRD E H SL KSL FF+H T+KFPLVVIFLLI ++ +P SA IL L
Sbjct: 175 LGSNRDVRDNDG----ETHHFSLHKSLDFFLHFTSKFPLVVIFLLIALFLVPCSAVILVL 230
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y LVTI+FA+PSFL+LYFAYP++ L
Sbjct: 231 YFLVTIVFAIPSFLVLYFAYPTIQRL 256
>gi|356494910|ref|XP_003516324.1| PREDICTED: uncharacterized protein LOC100796991 [Glycine max]
Length = 262
Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 155/266 (58%), Positives = 186/266 (69%), Gaps = 11/266 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS L ++ LK S + S+ ++ECSDD+V S SR+E LECPICWESFN+VENVP
Sbjct: 2 MWSFASNALT-SIRLKIGSKQPSQTSAECSDDEVCSNASRDEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNC+LGLQWAVVKFPT +++P FISCPWC+LLSFR++ KGNLK+P KN+
Sbjct: 61 YVLWCGHTLCKNCVLGLQWAVVKFPTQQIKIPFFISCPWCHLLSFRIICKGNLKYPCKNF 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES+NGDR K S C D QP S + G+Q+ N RR P
Sbjct: 121 FLLWMVESLNGDRNKLVST-CTDNQPIWSPK-CNLLGSQVTNCNLRRAS--------VSP 170
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
H E H SL KSL FF+H T+KFPLVVIFLLI ++ IP A IL L
Sbjct: 171 CSRLLGSNHDVGVNDGETHHFSLHKSLDFFLHFTSKFPLVVIFLLIALFLIPCCAVILVL 230
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y LVTILFA+PSFL+LYFAYP++ L
Sbjct: 231 YFLVTILFAIPSFLVLYFAYPTIQRL 256
>gi|190899642|gb|ACE98334.1| expressed protein [Populus tremula]
Length = 181
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/185 (75%), Positives = 154/185 (83%), Gaps = 4/185 (2%)
Query: 24 EAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVK 83
+ SE SDD+ SSVVSREE LECPICWESFN+VENVPYVLWCGHTLCKNCILGLQWAVVK
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 84 FPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
FPTLP+QLPLFISCPWCNLLSFR+VY+GNLKFPRKNYFLLWMVES NGDR KSH FCED
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGTFCED 120
Query: 144 RQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSL 203
+QP SS + GNQ +RGN RRGQ Y HH EP+ +N DH H +YL V RIHSSL
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQ----YVHHAEPSNANHDHNHVNSYLNVRRIHSSL 176
Query: 204 RKSLI 208
+KSL+
Sbjct: 177 QKSLV 181
>gi|190899620|gb|ACE98323.1| expressed protein [Populus tremula]
gi|190899622|gb|ACE98324.1| expressed protein [Populus tremula]
gi|190899624|gb|ACE98325.1| expressed protein [Populus tremula]
gi|190899626|gb|ACE98326.1| expressed protein [Populus tremula]
gi|190899628|gb|ACE98327.1| expressed protein [Populus tremula]
gi|190899630|gb|ACE98328.1| expressed protein [Populus tremula]
gi|190899632|gb|ACE98329.1| expressed protein [Populus tremula]
gi|190899634|gb|ACE98330.1| expressed protein [Populus tremula]
gi|190899636|gb|ACE98331.1| expressed protein [Populus tremula]
gi|190899638|gb|ACE98332.1| expressed protein [Populus tremula]
gi|190899640|gb|ACE98333.1| expressed protein [Populus tremula]
gi|190899644|gb|ACE98335.1| expressed protein [Populus tremula]
gi|190899646|gb|ACE98336.1| expressed protein [Populus tremula]
gi|190899650|gb|ACE98338.1| expressed protein [Populus tremula]
gi|190899652|gb|ACE98339.1| expressed protein [Populus tremula]
gi|190899654|gb|ACE98340.1| expressed protein [Populus tremula]
gi|190899656|gb|ACE98341.1| expressed protein [Populus tremula]
gi|190899658|gb|ACE98342.1| expressed protein [Populus tremula]
gi|190899660|gb|ACE98343.1| expressed protein [Populus tremula]
gi|190899662|gb|ACE98344.1| expressed protein [Populus tremula]
gi|190899664|gb|ACE98345.1| expressed protein [Populus tremula]
gi|190899666|gb|ACE98346.1| expressed protein [Populus tremula]
gi|190899668|gb|ACE98347.1| expressed protein [Populus tremula]
gi|190899670|gb|ACE98348.1| expressed protein [Populus tremula]
gi|190899672|gb|ACE98349.1| expressed protein [Populus tremula]
gi|190899676|gb|ACE98351.1| expressed protein [Populus tremula]
gi|190899678|gb|ACE98352.1| expressed protein [Populus tremula]
gi|190899680|gb|ACE98353.1| expressed protein [Populus tremula]
gi|190899684|gb|ACE98355.1| expressed protein [Populus tremula]
gi|190899686|gb|ACE98356.1| expressed protein [Populus tremula]
Length = 181
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/185 (75%), Positives = 154/185 (83%), Gaps = 4/185 (2%)
Query: 24 EAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVK 83
+ SE SDD+ SSVVSREE LECPICWESFN+VENVPYVLWCGHTLCKNCILGLQWAVVK
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 84 FPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
FPTLP+QLPLFISCPWCNLLSFR+VY+GNLKFPRKNYFLLWMVES NGDR KSH FCED
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGTFCED 120
Query: 144 RQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSL 203
+QP SS + GNQ +RGN RRGQ Y HH EP+ +N DH H +YL V RIHSSL
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQ----YVHHAEPSDANHDHNHVNSYLNVRRIHSSL 176
Query: 204 RKSLI 208
+KSL+
Sbjct: 177 QKSLV 181
>gi|190899674|gb|ACE98350.1| expressed protein [Populus tremula]
Length = 181
Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 140/185 (75%), Positives = 154/185 (83%), Gaps = 4/185 (2%)
Query: 24 EAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVK 83
+ SE SDD+ SSVVSREE LECPICWESFN+VENVPYVLWCGHTLCKNCILGLQWAVVK
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 84 FPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
FPTLP+QLPLFISCPWCNLLSFR+VY+GNLKFPRKNYFLLWMVES NGDR KSH FCED
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGTFCED 120
Query: 144 RQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSL 203
+QP SS + GNQ +RGN RRGQ Y HH EP+ +N DH H +YL V RIHSSL
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQ----YVHHAEPSEANHDHNHVNSYLNVRRIHSSL 176
Query: 204 RKSLI 208
+KSL+
Sbjct: 177 QKSLV 181
>gi|190899648|gb|ACE98337.1| expressed protein [Populus tremula]
Length = 181
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/185 (75%), Positives = 153/185 (82%), Gaps = 4/185 (2%)
Query: 24 EAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVK 83
+ SE SDD+ SSVVSREE LECPICWESFN+VE VPYVLWCGHTLCKNCILGLQWAVVK
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVETVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 84 FPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
FPTLP+QLPLFISCPWCNLLSFR+VY+GNLKFPRKNYFLLWMVES NGDR KSH FCED
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGSFCED 120
Query: 144 RQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSL 203
+QP SS + GNQ +RGN RRGQ Y HH EP+ +N DH H +YL V RIHSSL
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQ----YVHHAEPSDANHDHNHVNSYLNVRRIHSSL 176
Query: 204 RKSLI 208
+KSL+
Sbjct: 177 QKSLV 181
>gi|255635754|gb|ACU18226.1| unknown [Glycine max]
Length = 262
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/266 (57%), Positives = 185/266 (69%), Gaps = 11/266 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS L ++ LK S + S+ ++ECSDD+V S SR+E LECPICWESFN+VENVP
Sbjct: 2 MWSFASNALT-SIRLKIGSKQPSQTSAECSDDEVCSNASRDEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKN +LGLQWAVVKFPT +++P FISCPWC+LLSFR++ KGNLK+P KN+
Sbjct: 61 YVLWCGHTLCKNWVLGLQWAVVKFPTQQIKIPFFISCPWCHLLSFRIICKGNLKYPCKNF 120
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES+NGDR K S C D QP S + G+Q+ N RR P
Sbjct: 121 FLLWMVESLNGDRNKLVST-CTDNQPIWSPK-CNLLGSQVTNCNLRRAS--------VSP 170
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
H E H SL KSL FF+H T+KFPLVVIFLLI ++ IP A IL L
Sbjct: 171 CSRLLGSNHDVGVNDGETHHFSLHKSLDFFLHFTSKFPLVVIFLLIALFLIPCCAVILVL 230
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y LVTILFA+PSFL+LYFAYP++ L
Sbjct: 231 YFLVTILFAIPSFLVLYFAYPTIQRL 256
>gi|190899682|gb|ACE98354.1| expressed protein [Populus tremula]
Length = 181
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/185 (75%), Positives = 153/185 (82%), Gaps = 4/185 (2%)
Query: 24 EAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVK 83
+ SE SDD+ SSVVSREE LECPICWESFN+VENVPYVLWCGHTLCKNCILGLQWAVVK
Sbjct: 1 QVPSEYSDDEASSVVSREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVK 60
Query: 84 FPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
FPTLP+QLPLFISCPWCNLLSFR+VY+GNLKFP KNYFLLWMVES NGDR KSH FCED
Sbjct: 61 FPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPHKNYFLLWMVESKNGDREKSHGTFCED 120
Query: 144 RQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSL 203
+QP SS + GNQ +RGN RRGQ Y HH EP+ +N DH H +YL V RIHSSL
Sbjct: 121 QQPHWSSDSNLALGNQASRGNIRRGQ----YVHHAEPSEANHDHNHVNSYLNVRRIHSSL 176
Query: 204 RKSLI 208
+KSL+
Sbjct: 177 QKSLV 181
>gi|357487441|ref|XP_003614008.1| hypothetical protein MTR_5g043680 [Medicago truncatula]
gi|355515343|gb|AES96966.1| hypothetical protein MTR_5g043680 [Medicago truncatula]
Length = 261
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/266 (56%), Positives = 185/266 (69%), Gaps = 11/266 (4%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS L ++G+K S + + +ECSDD+V S S++E LECPICWESFN+VENVP
Sbjct: 1 MWNFASHALT-SIGMKRSSTEPILSCAECSDDEVCSNASKDEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNC+LGLQWAV+KFPT +++P F+SCPWC+LLSFR +YKGN+KFPRKN+
Sbjct: 60 YVLWCGHTLCKNCVLGLQWAVMKFPTQQIRIPFFVSCPWCHLLSFRFIYKGNMKFPRKNF 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES+NGDR K+ S D QP S N L H E
Sbjct: 120 FLLWMVESLNGDRHKAVSA-SVDSQPIWSPK-----VNLLGSQGTGCSPSRSSSSHCSEQ 173
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
GSN +A ER + SL KSL FF+H T+KFPLV+IFLLI + IP S IL +
Sbjct: 174 LGSN----NAVRGSDRERHYFSLHKSLDFFLHFTSKFPLVIIFLLIAFFVIPCSIVILII 229
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y L+TI+FA+PSF++LYFAYP++ L
Sbjct: 230 YFLLTIIFAIPSFIVLYFAYPTIQRL 255
>gi|297841667|ref|XP_002888715.1| hypothetical protein ARALYDRAFT_476060 [Arabidopsis lyrata subsp.
lyrata]
gi|297334556|gb|EFH64974.1| hypothetical protein ARALYDRAFT_476060 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/271 (53%), Positives = 185/271 (68%), Gaps = 19/271 (7%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW FAS + G++GLK ++A+S+CSDD+VS+V EE LECPICWESFN+VENVP
Sbjct: 1 MWGFASNVI-GSMGLKKSPKDPAQASSQCSDDEVSNVSRDEEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLC+NC+ GLQ AV++ + +++P F+SCPWC LLSFR+VYKGNLKFPRKN+
Sbjct: 60 YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGN-----HRRGQHHHHYH 175
FLLWMVES+NGDR S +++Q + S + GNQ + N R Q
Sbjct: 120 FLLWMVESLNGDRTSHASLVSDNQQSVPTPRCSMSLGNQSSNNNLIARPLLRNQSTELLP 179
Query: 176 HHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASA 235
HH DH + + R H S KSL FF+ T+KFP V+IFLLIV +AIP S
Sbjct: 180 HH--------DHSNQPS-----RQHFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSL 226
Query: 236 AILALYILVTILFALPSFLILYFAYPSLDWL 266
ILALY L+TILFA+P+ L+LYFAYP L+ L
Sbjct: 227 IILALYFLLTILFAVPAGLVLYFAYPILERL 257
>gi|224112152|ref|XP_002316100.1| predicted protein [Populus trichocarpa]
gi|222865140|gb|EEF02271.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 151/264 (57%), Positives = 187/264 (70%), Gaps = 10/264 (3%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW FAS L ++GLK S +A+ A E SDD+V S VS EE LECPICWESFN+VENVP
Sbjct: 1 MWKFASNALT-SIGLKKSSREANRANLEFSDDEVCSNVSGEEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGH+LC+NC+LGLQ AV+ F +++P F+SCPWC LLSFR+VY+G+LKFPRKN+
Sbjct: 60 YVLWCGHSLCENCVLGLQCAVLGFSMQKIRIPFFVSCPWCQLLSFRLVYQGSLKFPRKNF 119
Query: 121 FLLWMVESMNGDRVKSHSGFC-EDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPE 179
FLLWMV+ +NGDRVK S C D QP S G FG+Q + + R Y+
Sbjct: 120 FLLWMVQKLNGDRVKFSSSLCTNDNQPIWSPKGKIIFGHQFSNSSLSRAP----YNQGQS 175
Query: 180 PAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILA 239
G N D + ER HSSL KSL +F+ T KFPLV+IFLLIV++ +P SA I+
Sbjct: 176 QLGFNGDGGSRSG----ERNHSSLHKSLDYFLDFTTKFPLVIIFLLIVLFVVPISAVIVL 231
Query: 240 LYILVTILFALPSFLILYFAYPSL 263
LY+LVT+LFALPSFL+LYFAYP+L
Sbjct: 232 LYLLVTVLFALPSFLVLYFAYPTL 255
>gi|21594048|gb|AAM65966.1| unknown [Arabidopsis thaliana]
Length = 270
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 186/277 (67%), Gaps = 25/277 (9%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW FAS + G++GLK +++A+S+CSDD+VS++ EE LECPICWESFN+VENVP
Sbjct: 1 MWGFASNVI-GSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLC+NC+ GLQ AV++ + +++P F+SCPWC LLSFR+VYKGNLKFPRKN+
Sbjct: 60 YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 119
Query: 121 FLLWMVESMNGDRVK-----SHSGFCED-RQPASSSSGSSTFGNQLNRGN-----HRRGQ 169
FLLWMVES+NGDR SH D +Q A + S + GN ++ N R Q
Sbjct: 120 FLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTLRCSMSLGNHISNNNLVARPLLRNQ 179
Query: 170 HHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVY 229
HH DH + + R S KSL FF+ T+KFP V+IFLLIV +
Sbjct: 180 STDLLPHH--------DHSNQPS-----RQLFSFHKSLDFFISFTSKFPFVIIFLLIVFF 226
Query: 230 AIPASAAILALYILVTILFALPSFLILYFAYPSLDWL 266
AIP S ILALY L+TILFA+P+ L+LYFAYP L+ L
Sbjct: 227 AIPGSLIILALYFLLTILFAVPAGLVLYFAYPILERL 263
>gi|18409246|ref|NP_564959.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12325097|gb|AAG52506.1|AC018364_24 unknown protein; 31958-32770 [Arabidopsis thaliana]
gi|12597782|gb|AAG60094.1|AC073178_5 unknown protein [Arabidopsis thaliana]
gi|19699330|gb|AAL91275.1| At1g69330/F10D13.3 [Arabidopsis thaliana]
gi|23505825|gb|AAN28772.1| At1g69330/F10D13.3 [Arabidopsis thaliana]
gi|332196791|gb|AEE34912.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 270
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 185/277 (66%), Gaps = 25/277 (9%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW FAS + G++GLK +++A+S+CSDD+VS++ EE LECPICWESFN+VENVP
Sbjct: 1 MWGFASNVI-GSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLC+NC+ GLQ AV++ + +++P F+SCPWC LLSFR+VYKGNLKFPRKN+
Sbjct: 60 YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 119
Query: 121 FLLWMVESMNGDRVK-----SHSGFCED-RQPASSSSGSSTFGNQLNRGN-----HRRGQ 169
FLLWMVES+NGDR SH D +Q A + S + GN + N R Q
Sbjct: 120 FLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLRNQ 179
Query: 170 HHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVY 229
HH DH + + R S KSL FF+ T+KFP V+IFLLIV +
Sbjct: 180 STDLLPHH--------DHSNQPS-----RQLFSFHKSLDFFISFTSKFPFVIIFLLIVFF 226
Query: 230 AIPASAAILALYILVTILFALPSFLILYFAYPSLDWL 266
AIP S ILALY L+TILFA+P+ L+LYFAYP L+ L
Sbjct: 227 AIPGSLIILALYFLLTILFAVPAGLVLYFAYPILERL 263
>gi|297733919|emb|CBI15166.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/142 (81%), Positives = 128/142 (90%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWNFAS L+G GLKND LK ++A SECSDD++S+ SREE LECPICWESFN+VENVP
Sbjct: 1 MWNFASNALSGTNGLKNDLLKPNQAPSECSDDEISTNTSREEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGHTLCKNC+LGLQWAVVKFPTLP+QLP FISCPWCNLLSFR+VYKGNL FPRKN+
Sbjct: 61 YVLWCGHTLCKNCVLGLQWAVVKFPTLPIQLPFFISCPWCNLLSFRLVYKGNLTFPRKNF 120
Query: 121 FLLWMVESMNGDRVKSHSGFCE 142
FLLWMVESMNGDR KSHS FC+
Sbjct: 121 FLLWMVESMNGDRGKSHSSFCD 142
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/50 (92%), Positives = 50/50 (100%)
Query: 217 FPLVVIFLLIVVYAIPASAAILALYILVTILFALPSFLILYFAYPSLDWL 266
FPLV+IFLLIV+YAIPASAAILALYIL+T+LFALPSFLILYFAYPSLDWL
Sbjct: 146 FPLVIIFLLIVLYAIPASAAILALYILITVLFALPSFLILYFAYPSLDWL 195
>gi|21592563|gb|AAM64512.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 261
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 168/271 (61%), Gaps = 21/271 (7%)
Query: 1 MWNFASTCLAGNVGLKND--SLKASEAASECSDDDVSSVVSREESLECPICWESFNMVEN 58
MWN AS + K + + K A + S D + ++EE LECPICWESFN+VEN
Sbjct: 1 MWNLASKSIREGFISKGEEAATKPRRATLDRSGDGRKT--TKEEKLECPICWESFNVVEN 58
Query: 59 VPYVLWCGHTLCKNCILGLQWA-VVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPR 117
VPYVLWCGHT+CK C+LGLQ A V+K LP QLP F++CPWCN+LS R+V G ++FP
Sbjct: 59 VPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPS 118
Query: 118 KNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHH 177
KN++LLWMVESMNG R ++ S ++++ AS R R +
Sbjct: 119 KNFYLLWMVESMNGSRSEAPS---DNKRVASG-----------QRDLRNRCDGMSNTALG 164
Query: 178 PEPAGSNRDHLHAT--NYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASA 235
E NR + + R+H S+RKS+ HL AKFPLVVIFLL+ +YAIP SA
Sbjct: 165 DEGLLDNRSWWNGVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSA 224
Query: 236 AILALYILVTILFALPSFLILYFAYPSLDWL 266
A+L +Y VT A+PSFL+LYFA+PSL+WL
Sbjct: 225 AVLGVYFFVTFALAVPSFLVLYFAFPSLNWL 255
>gi|15221223|ref|NP_177577.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324808|gb|AAG52370.1|AC011765_22 putative RING zinc finger protein; 15305-14520 [Arabidopsis
thaliana]
gi|66865912|gb|AAY57590.1| RING finger family protein [Arabidopsis thaliana]
gi|87116604|gb|ABD19666.1| At1g74370 [Arabidopsis thaliana]
gi|110736984|dbj|BAF00447.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|332197462|gb|AEE35583.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 261
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 168/271 (61%), Gaps = 21/271 (7%)
Query: 1 MWNFASTCLAGNVGLKND--SLKASEAASECSDDDVSSVVSREESLECPICWESFNMVEN 58
MWN AS + K + + K A + S D + ++EE LECPICWESFN+VEN
Sbjct: 1 MWNLASKSIREGFISKGEEAATKPRRATLDRSGDGRKT--TKEEKLECPICWESFNVVEN 58
Query: 59 VPYVLWCGHTLCKNCILGLQWA-VVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPR 117
VPYVLWCGHT+CK C+LGLQ A V+K LP QLP F++CPWCN+LS R+V G ++FP
Sbjct: 59 VPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPS 118
Query: 118 KNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHH 177
KN++LLWMVESMNG R ++ S ++++ AS R R +
Sbjct: 119 KNFYLLWMVESMNGSRSEAPS---DNKRVASG-----------QRDLRNRCDGVSNTALG 164
Query: 178 PEPAGSNRDHLHAT--NYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASA 235
E NR + + R+H S+RKS+ HL AKFPLVVIFLL+ +YAIP SA
Sbjct: 165 DEGLLDNRSWWNGVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSA 224
Query: 236 AILALYILVTILFALPSFLILYFAYPSLDWL 266
A+L +Y VT A+PSFL+LYFA+PSL+WL
Sbjct: 225 AVLGVYFFVTFALAVPSFLVLYFAFPSLNWL 255
>gi|297842183|ref|XP_002888973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334814|gb|EFH65232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 259
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 160/271 (59%), Gaps = 23/271 (8%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MWN AS + + + + S ++EE LECPICWESFN+VENVP
Sbjct: 1 MWNLASKSIREGFKSQGEEAATKQRKSPSDSSGDGRRTTKEEKLECPICWESFNVVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVV-KFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKN 119
YVLWCGHT+CK C+LGLQ AVV K LP QLP F++CPWCN+LS R+V G +KFP KN
Sbjct: 61 YVLWCGHTICKYCLLGLQRAVVIKSSALPFQLPFFVACPWCNILSLRLVCSGTIKFPSKN 120
Query: 120 YFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPE 179
++LLWMVESMNG R ++ S N+ H R + + +
Sbjct: 121 FYLLWMVESMNGCRSEARS------------------DNKRVTSGHLRKRCDGVSNTASD 162
Query: 180 PAG--SNRDHLHAT--NYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASA 235
G NR + + R+H S+ KS+ HL +KFPLVVIFLL+ +YAIP SA
Sbjct: 163 DGGLLDNRSWWNGVTRGFFGTGRLHDSVCKSMALVAHLLSKFPLVVIFLLMALYAIPVSA 222
Query: 236 AILALYILVTILFALPSFLILYFAYPSLDWL 266
A+L LY VT A+PSFL+LYFA+PSL+WL
Sbjct: 223 AVLGLYFFVTFALAVPSFLVLYFAFPSLNWL 253
>gi|168032174|ref|XP_001768594.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680093|gb|EDQ66532.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 141/234 (60%), Gaps = 11/234 (4%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 94
S+ S EE LECP+CWE + +N PYVLWCGH+LCK+C+L L+WA VK LP+QLPLF
Sbjct: 1 SASRSLEEGLECPVCWEILDDRDNTPYVLWCGHSLCKSCVLNLEWATVKLSGLPLQLPLF 60
Query: 95 ISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSG-- 152
ISCPWC L+FR +KG LK+P KN+FLLW+VES+ G+ R PA ++
Sbjct: 61 ISCPWCQFLTFRFKWKGQLKYPCKNFFLLWVVESLQGE---------HGRPPACTNETEL 111
Query: 153 SSTFGNQLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFVH 212
+ FG L R P + ++ S + + +
Sbjct: 112 APMFGLDLASLITSRAGRVGFSAASPGAIVTGNSVAAVGDWWNFHHWQRSGTRVVASLLQ 171
Query: 213 LTAKFPLVVIFLLIVVYAIPASAAILALYILVTILFALPSFLILYFAYPSLDWL 266
TA+ PLV++FL IVVY +P S +LALY L+T+LFA+PSFL++YF+YPSLDWL
Sbjct: 172 FTARIPLVLLFLFIVVYVLPFSTLVLALYCLITVLFAIPSFLVVYFSYPSLDWL 225
>gi|449486571|ref|XP_004157335.1| PREDICTED: uncharacterized LOC101218619 [Cucumis sativus]
Length = 236
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/266 (49%), Positives = 162/266 (60%), Gaps = 36/266 (13%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW AS +AG KN + + + ECSDD+ S SR+E LECPICWESFN+VENVP
Sbjct: 1 MWKLASNAIAGIRSKKNSDV-SKQVFWECSDDEACSEASRDEELECPICWESFNIVENVP 59
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
YVLWCGH+LCKNC+LGLQ +V+K T +++P+ ISCPWC+ LS RVVYKGNLKFP KN+
Sbjct: 60 YVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNF 119
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES NG+ K F D P S P
Sbjct: 120 FLLWMVESFNGNEGKLDHSFNSDNHPLFSL-----------------------------P 150
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+G+ T +T ER L F VHL KF L+VIF+LIVV+ IP SA IL L
Sbjct: 151 SGT------GTGTVTSERRRLFFYNHLDFVVHLIFKFLLLVIFVLIVVFVIPGSALILLL 204
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y+L+T+LFALPS LI Y A+ +L+ L
Sbjct: 205 YLLITLLFALPSLLIFYLAFHALEKL 230
>gi|168026406|ref|XP_001765723.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683149|gb|EDQ69562.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 142/233 (60%), Gaps = 17/233 (7%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
S EE LECP+CWESF+ +N PYVLWCGH+LCKNC+L L+WA VK LP+QLPLFI CP
Sbjct: 1 SLEEGLECPVCWESFDDTDNTPYVLWCGHSLCKNCVLNLEWATVKLSGLPLQLPLFICCP 60
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPA-----SSSSGS 153
WC L+ R +KG L++P KN+FLLW+VES+ G+ +S S ED +P+ S S
Sbjct: 61 WCQFLTVRFKWKGQLRYPCKNFFLLWVVESLQGEHGRS-SVCAEDTEPSPLCGLGPVSLS 119
Query: 154 STFGNQLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHL 213
S + G G P +NR LH + S F
Sbjct: 120 SPHAGRAGSGVVSPGA---IVRQDPVIVATNRWGLHGWRRSGTRLVAS--------FSQF 168
Query: 214 TAKFPLVVIFLLIVVYAIPASAAILALYILVTILFALPSFLILYFAYPSLDWL 266
+ PLV++FL I+VY +P S +LA+Y ++T+LFA+PSFL++YF+YPSLDWL
Sbjct: 169 MVRVPLVLLFLFILVYVLPFSTLVLAIYCIITVLFAVPSFLVVYFSYPSLDWL 221
>gi|361067535|gb|AEW08079.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165541|gb|AFG65646.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165542|gb|AFG65647.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165543|gb|AFG65648.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165544|gb|AFG65649.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165545|gb|AFG65650.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165546|gb|AFG65651.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165547|gb|AFG65652.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165548|gb|AFG65653.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165549|gb|AFG65654.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165551|gb|AFG65656.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165552|gb|AFG65657.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165553|gb|AFG65658.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165554|gb|AFG65659.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165555|gb|AFG65660.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165556|gb|AFG65661.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
gi|383165557|gb|AFG65662.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
Length = 154
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE LECPICWESFN+VENVPYVLWCGHTLCKNC+LGLQWA VKFPTLPVQLPLFISCPWC
Sbjct: 1 EERLECPICWESFNIVENVPYVLWCGHTLCKNCVLGLQWATVKFPTLPVQLPLFISCPWC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQL 160
LLSFR+V+KG LKFPRKN+FLLWMVESMN +R + H D+ +++G + +
Sbjct: 61 QLLSFRLVWKGCLKFPRKNFFLLWMVESMNDER-RLHGSIGGDQGVLPTNAGLDSGSASI 119
Query: 161 NRGNHRRGQHHHH 173
NHR H H
Sbjct: 120 LSANHRHCAHVEH 132
>gi|383165550|gb|AFG65655.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
Length = 154
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/133 (66%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE LECPICWESFN+VEN+PYVLWCGHTLCKNC+LGLQWA VKFPTLPVQLPLFISCPWC
Sbjct: 1 EERLECPICWESFNIVENIPYVLWCGHTLCKNCVLGLQWATVKFPTLPVQLPLFISCPWC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQL 160
LLSFR+V+KG LKFPRKN+FLLWMVESMN +R + H D+ +++G + +
Sbjct: 61 QLLSFRLVWKGCLKFPRKNFFLLWMVESMNDER-RLHGSIGGDQGVLPTNAGLDSGSASI 119
Query: 161 NRGNHRRGQHHHH 173
NHR H H
Sbjct: 120 LSANHRHCAHVEH 132
>gi|361067537|gb|AEW08080.1| Pinus taeda anonymous locus 0_18384_02 genomic sequence
Length = 154
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE LECPICWESFN+VENVPYVLWCGHTLCKNC+LGLQWA VKFPTLPVQLPLFISCPWC
Sbjct: 1 EERLECPICWESFNIVENVPYVLWCGHTLCKNCVLGLQWATVKFPTLPVQLPLFISCPWC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQL 160
LLSFR+V+KG LKFPRKN+FLLWMVESMN +R + H D+ ++ G + +
Sbjct: 61 QLLSFRLVWKGCLKFPRKNFFLLWMVESMNDER-RLHGSIGGDQGVLPTNVGLDSGSASV 119
Query: 161 NRGNHRRGQHHHH 173
NHR H H
Sbjct: 120 LSANHRACAHVEH 132
>gi|255628311|gb|ACU14500.1| unknown [Glycine max]
Length = 109
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW+FAS L ++GLK S + S+ ++ECSDD+V S SR+E LECPICWESFN+VENVP
Sbjct: 2 MWSFASNALT-SIGLKRGSKQPSQTSAECSDDEVCSNASRDEGLECPICWESFNIVENVP 60
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVY 109
YVLWCGHTLCKNCILGLQWAVVKFPT +++P FISCPWC+LLSFR++Y
Sbjct: 61 YVLWCGHTLCKNCILGLQWAVVKFPTQQIKIPFFISCPWCHLLSFRIIY 109
>gi|302817853|ref|XP_002990601.1| hypothetical protein SELMODRAFT_132049 [Selaginella moellendorffii]
gi|300141523|gb|EFJ08233.1| hypothetical protein SELMODRAFT_132049 [Selaginella moellendorffii]
Length = 265
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 131/233 (56%), Gaps = 29/233 (12%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
++ LECP+CWE+FN ++ PYVL+CGHTLCK C++GLQW +K L +QLPL + CPWC
Sbjct: 48 DDCLECPVCWENFNGGDHTPYVLFCGHTLCKTCLMGLQWGTIK--PLQLQLPLLVPCPWC 105
Query: 101 NLLSFRVVYKGN-LKFPRKNYFLLWMVESMNGDR--VKSHSGFCEDRQPASS--SSGSST 155
L+ R+ +KG LKFP KN+FLL +VE+ G + ED PAS G+
Sbjct: 106 QFLTLRLSWKGGRLKFPAKNFFLLSIVEAARGSSSAATTECSKPEDHVPASRRLDKGAWR 165
Query: 156 FGN--QLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHL 213
+ Q+ +R H H D +A L + R+ +
Sbjct: 166 MSDVWQIGLNLQQRRVWHEIVH----------DEWNADQVLKLIRL----------IAQV 205
Query: 214 TAKFPLVVIFLLIVVYAIPASAAILALYILVTILFALPSFLILYFAYPSLDWL 266
+K P +++ L +V Y +P SA +L LY LVT++FA+P +L+LYF+YP + WL
Sbjct: 206 ISKLPPMILLLFLVFYVLPFSALVLVLYSLVTLVFAVPCYLVLYFSYPGMQWL 258
>gi|449452158|ref|XP_004143827.1| PREDICTED: uncharacterized protein LOC101218619 [Cucumis sativus]
Length = 192
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 125/266 (46%), Gaps = 80/266 (30%)
Query: 1 MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
MW AS +AG KN + + + ECSDD+ S SR+E LECPICWESFN+VEN
Sbjct: 1 MWKLASNAIAGIRSKKNSDV-SKQVFWECSDDEACSEASRDEELECPICWESFNIVEN-- 57
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120
LS RVVYKGNLKFP KN+
Sbjct: 58 ------------------------------------------LSLRVVYKGNLKFPSKNF 75
Query: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180
FLLWMVES NG+ K F D P S P
Sbjct: 76 FLLWMVESFNGNEGKLDHSFNSDNHPLFSL-----------------------------P 106
Query: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240
+G+ T +T ER L F VHL KF L+VIF+LIVV+ IP SA IL L
Sbjct: 107 SGT------GTGTVTSERRRLFFYNHLDFVVHLIFKFLLLVIFVLIVVFVIPGSALILLL 160
Query: 241 YILVTILFALPSFLILYFAYPSLDWL 266
Y+L+T+LFALPS LI Y A+ +L+ L
Sbjct: 161 YLLITLLFALPSLLIFYLAFHALEKL 186
>gi|294963187|gb|ADF50083.1| putative ubiquitin-protein ligase/zinc ion binding [Olea europaea]
Length = 58
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 176 HHPE--PAGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYA 230
HH E +GSN + + ER+HSSL KSL+FFVHLTAKFPLV+IFL+IV+Y
Sbjct: 2 HHTEHLGSGSNNNGNQFNSSFAFERLHSSLTKSLVFFVHLTAKFPLVIIFLIIVLYV 58
>gi|297850596|ref|XP_002893179.1| preprotein translocase secA family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339021|gb|EFH69438.1| preprotein translocase secA family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1579
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E+ ECP+C +SF+ VP VL CGHT C+ C+ LP + P I CP C
Sbjct: 2 EAPECPVCLQSFDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACT 51
Query: 102 LL 103
+L
Sbjct: 52 VL 53
>gi|334182750|ref|NP_001185058.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
gi|332192012|gb|AEE30133.1| preprotein translocase secA-like protein [Arabidopsis thaliana]
Length = 1805
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E ECP+C +S++ VP VL CGHT C+ C+ LP + P I CP C
Sbjct: 2 EEPECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACT 51
Query: 102 LL 103
+L
Sbjct: 52 VL 53
>gi|25151067|ref|NP_740796.1| Protein Y51F10.2 [Caenorhabditis elegans]
gi|373220546|emb|CCD73473.1| Protein Y51F10.2 [Caenorhabditis elegans]
Length = 305
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI-LGLQWAVVKFPTLP 88
S DV + +S + C IC E F+ +++P +L C HT+C+ CI L + + + P
Sbjct: 6 SSTDVKTYIS---TPSCRICLEPFDEGQHLPKILQCAHTVCERCIGLLDEQSRINHNRPP 62
Query: 89 VQLP-LFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGD 132
+ + I CP C R V + + R NY L+ +++SM G+
Sbjct: 63 IDRSFVHIRCPVC-----RAVTQTPRNYIRSNYQLIELMDSMRGE 102
>gi|186478734|ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
gi|17529236|gb|AAL38845.1| putative SecA-type chloroplast protein transport factor
[Arabidopsis thaliana]
gi|20465933|gb|AAM20152.1| putative SecA-type chloroplast transport factor protein
[Arabidopsis thaliana]
gi|110739333|dbj|BAF01579.1| hypothetical protein [Arabidopsis thaliana]
gi|332192014|gb|AEE30135.1| zinc ion binding protein [Arabidopsis thaliana]
Length = 811
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E ECP+C +S++ VP VL CGHT C+ C+ LP + P I CP C
Sbjct: 2 EEPECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACT 51
Query: 102 LL 103
+L
Sbjct: 52 VL 53
>gi|5263316|gb|AAD41418.1|AC007727_7 Contains PF|00097 Zinc finger C3HC4 type and 4 WD40 PF|00400 (G
beta) domains [Arabidopsis thaliana]
Length = 860
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E ECP+C +S++ VP VL CGHT C+ C+ LP + P I CP C
Sbjct: 2 EEPECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACT 51
Query: 102 LL 103
+L
Sbjct: 52 VL 53
>gi|308485230|ref|XP_003104814.1| hypothetical protein CRE_23991 [Caenorhabditis remanei]
gi|308257512|gb|EFP01465.1| hypothetical protein CRE_23991 [Caenorhabditis remanei]
Length = 627
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
+ CP+C E +N+ E P + CGHT+C C A+V T PV + CP C
Sbjct: 17 ISCPVCREVYNLTERSPINVPCGHTICSQC----SSALVPRHTQPV-----LMCPVCRKR 67
Query: 104 SFRVVYKG--NLKFPRKNYFLLWMVESM 129
+ + G FP KNY LL +VE +
Sbjct: 68 HYGQLNGGAYTFSFP-KNYQLLEVVEKV 94
>gi|294461123|gb|ADE76127.1| unknown [Picea sitchensis]
Length = 221
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E ECP+CW+SF+ ++P +L CGHT+C+ C+ LP ++ L C C
Sbjct: 2 EVPECPVCWDSFDRDTHMPRLLRCGHTVCQLCL----------KCLPTEMRLGQRCLRCP 51
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVE-SMNGDRVKS 136
V++ + P KNY LL +++ S N DR +S
Sbjct: 52 ECRIPCVWRRVHELP-KNYILLRVMDSSSNTDRSQS 86
>gi|341898637|gb|EGT54572.1| hypothetical protein CAEBREN_03572 [Caenorhabditis brenneri]
Length = 620
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 22/98 (22%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
DD V +SL C IC+E F + P L CGHT C CI GL P + +Q
Sbjct: 260 DDSERCVVSTDSLRCGICYEIF---DGSPQTLQCGHTFCSTCIKGL---TANRPNINMQ- 312
Query: 92 PLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESM 129
CP C N+ NY L+ ++ESM
Sbjct: 313 -----CPICR----------NISKSSPNYTLIGILESM 335
>gi|403340071|gb|EJY69303.1| Kelch motif family protein [Oxytricha trifallax]
Length = 598
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 17/81 (20%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
+ CPIC++ +N + +P +L CGHT C+NC++ L+ + + ++CP C
Sbjct: 2 DITCPICFDQYNDKDKIPRILQCGHTFCQNCLMDLRTSNI------------LTCPTC-- 47
Query: 103 LSFRVVYKGNLKFPRKNYFLL 123
R + ++K KN+ +L
Sbjct: 48 ---RKYFAPDVKQLIKNFTIL 65
>gi|341895836|gb|EGT51771.1| hypothetical protein CAEBREN_22293 [Caenorhabditis brenneri]
Length = 386
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 18/113 (15%)
Query: 38 VSREESLECPICWESF-NMVE-NVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF- 94
++E+LEC IC F + +E N+P +L CGHT+C +C LQ V L F
Sbjct: 5 AQKKEALECKICINPFSDTIESNIPRILGCGHTICHSCAESLQK---------VSLDKFS 55
Query: 95 ISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GDRVKSHSG--FCED 143
I CP+ ++ + GN++ +NY ++ ++++ N DR + CED
Sbjct: 56 IRCPFDRQIT--ANFYGNVEKLLRNYAIIDLIQARNEEADRAEEIKAPEICED 106
>gi|341902415|gb|EGT58350.1| hypothetical protein CAEBREN_20131 [Caenorhabditis brenneri]
Length = 273
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
Query: 12 NVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESF--NMVENVPYVLW-CGHT 68
NV ++ ++ + +E SD+D + S + +LEC IC + F + P +L CGH+
Sbjct: 161 NVQVQVVAMPVESSDAEESDEDGEEIDSLK-TLECNICVKRFKGSSKRRTPRILTNCGHS 219
Query: 69 LCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVES 128
LC C+ L + F+ CP C + VV G +K +KNY L ++E
Sbjct: 220 LCHKCLETLSGS-----------KGFVICPTC--MKKTVVPVGGVKMLQKNYIALGLLEE 266
Query: 129 MNGDR 133
++G +
Sbjct: 267 IDGKK 271
>gi|341895853|gb|EGT51788.1| hypothetical protein CAEBREN_26206 [Caenorhabditis brenneri]
Length = 708
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 38 VSREESLECPICWESFN--MVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
V R+E LEC +C F+ + N+P +L CGHT+C +C LQ + I
Sbjct: 344 VQRKEGLECKVCMNPFSDTIGYNIPRMLDCGHTVCHSCAESLQKVAPDKRS--------I 395
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
CP+ ++ + GN+ R+NY ++ ++++ N + + CED
Sbjct: 396 RCPFDRHVTDG--FYGNVDNLRRNYAIIDLIQARNEEANLAEELLCED 441
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 20/118 (16%)
Query: 34 VSSVVSREESLECPICWESFN--MVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
+S ++E+LEC IC F+ + N+P +L CGHT+C +C LQ V L
Sbjct: 1 MSQSAQKKEALECKICINPFSDTIESNIPRILNCGHTICHSCAESLQK---------VSL 51
Query: 92 PLF-ISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN-----GDRVKSHSGFCED 143
F I CP+ ++ + GN++ +NY ++ ++++ N +++K+ + CED
Sbjct: 52 DKFSIGCPFDRQITSN--FYGNVEKLLRNYAIIDLIQARNEEADLAEKMKA-AEICED 106
>gi|348535057|ref|XP_003455018.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Oreochromis
niloticus]
Length = 667
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC E++N + P +L CGHT+C+ C+ L + + CP+C+
Sbjct: 12 EVLECPICLETYNQEQMRPKLLQCGHTVCRQCLEKLLANTIN----------GVRCPFCS 61
Query: 102 LLS 104
+S
Sbjct: 62 KVS 64
>gi|341895866|gb|EGT51801.1| hypothetical protein CAEBREN_20440 [Caenorhabditis brenneri]
Length = 806
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 42 ESLECPICWESF-NMVE-NVPYVLWCGHTLCKNCILGLQ-WAVVKFPTLPVQLPLFISCP 98
+ LEC +C F + +E N+P VL CGHT+C +C LQ A KF FI CP
Sbjct: 447 QKLECKVCINPFSDTIECNIPRVLDCGHTVCTSCAESLQKVAPDKF---------FIRCP 497
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
+ +++ + G + R+NY ++ ++++ N + + CED
Sbjct: 498 FDRMITNG--FNGKVGSLRRNYAIIDLIQARNEEADLAEELICED 540
>gi|403348751|gb|EJY73819.1| hypothetical protein OXYTRI_04928 [Oxytricha trifallax]
Length = 264
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Query: 44 LECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
++C +C E FN E++P VL CGHT C+ C+L L W ISCP C
Sbjct: 1 MDCELCLEEFNQQEHMPKVLPQCGHTFCEKCMLQL-WQNQT-----------ISCPLCRQ 48
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGDR 133
+ R+ +L P+ NY LL + M +R
Sbjct: 49 KA-RITNPNDL--PQTNYALLRVHSQMKEER 76
>gi|71998586|ref|NP_494238.2| Protein ZK1240.9 [Caenorhabditis elegans]
gi|351065655|emb|CCD61649.1| Protein ZK1240.9 [Caenorhabditis elegans]
Length = 216
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 44 LECPICWESFNMVEN--VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
L+C +C E ++ ++ +P VL CGH++C+NC L A L I CP+C
Sbjct: 4 LQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNCATQLITA------------LLIICPFCR 51
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVESMNGD 132
+ + G+ + +KN+ L+ ++ M D
Sbjct: 52 ETT--EISDGDDQKLQKNFALVQAIQVMKAD 80
>gi|341900416|gb|EGT56351.1| hypothetical protein CAEBREN_10762 [Caenorhabditis brenneri]
Length = 475
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 23/121 (19%)
Query: 39 SREESLECPICWESFNMVEN-VPYVL-WCGHTLCKNC---ILGLQWAVV-KFPTLPVQLP 92
SR + C IC F ++ VP +L CGH+LC NC ILG Q ++ F +P +P
Sbjct: 3 SRSGTALCQICQREFTDDDDLVPRILTECGHSLCTNCAKQILGNQKKILCPFDRIPTDVP 62
Query: 93 LFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSG 152
G++K +KNY +L M E R + G +D++ + G
Sbjct: 63 -----------------DGDVKKLKKNYTILQMKEEEKFRRKEQIKGAVKDKKKTRKNDG 105
Query: 153 S 153
+
Sbjct: 106 T 106
>gi|449500824|ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, partial [Cucumis sativus]
Length = 741
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C ++++ VP VL CGH+ C C+ LP + P I CP CN+L
Sbjct: 5 ECPVCLQTYDGESIVPRVLSCGHSACGTCL----------ENLPQRFPETIRCPACNVL- 53
Query: 105 FRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
+ +G P+ L E G+ V S
Sbjct: 54 VKFPSQGASALPKNIDLLRLCPEPNAGELVSKKS 87
>gi|449459378|ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212974 [Cucumis sativus]
Length = 761
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C ++++ VP VL CGH+ C C+ LP + P I CP CN+L
Sbjct: 5 ECPVCLQTYDGESIVPRVLSCGHSACGTCL----------ENLPQRFPETIRCPACNVL- 53
Query: 105 FRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
+ +G P+ L E G+ V S
Sbjct: 54 VKFPSQGASALPKNIDLLRLCPEPNAGELVSKKS 87
>gi|341895900|gb|EGT51835.1| hypothetical protein CAEBREN_24285 [Caenorhabditis brenneri]
Length = 352
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 43/155 (27%)
Query: 43 SLECPICWESFNMVEN-VPYVLWCGHTLCKNC---ILGLQWAVVKFPTLPVQLPLFISCP 98
SLEC +C+E ++ + +P +L CGHT+C++C +L QW I CP
Sbjct: 3 SLECKVCFEEYSEADGHIPRMLSCGHTICEDCAEKLLDDQW--------------MIRCP 48
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGN 158
++ V G+++ KNY +L ++E SSSG ++F
Sbjct: 49 LDRKMT--CVSSGDVRDLSKNYTVLEVLEE-------------------RSSSGGASFMT 87
Query: 159 QLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNY 193
N+ + Y P N + LH ++Y
Sbjct: 88 TSNQDEKEEENNDDEYFQAP----CNENELHNSDY 118
>gi|47218690|emb|CAG12414.1| unnamed protein product [Tetraodon nigroviridis]
Length = 541
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 10/64 (15%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E LECPIC+E++N + P +L CGHT+C++C+ L + + CP+C
Sbjct: 12 REVLECPICFETYNQSQLRPKLLQCGHTVCQHCLEKLLANTIN----------GVRCPFC 61
Query: 101 NLLS 104
+ +S
Sbjct: 62 SKVS 65
>gi|149410249|ref|XP_001508478.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Ornithorhynchus
anatinus]
Length = 669
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+CK C+ L + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICKQCLEKLLAGSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|341895920|gb|EGT51855.1| hypothetical protein CAEBREN_22010 [Caenorhabditis brenneri]
Length = 337
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 38 VSREESLECPICWESFN--MVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
V R+E LEC +C F+ + N+P +L CGHT+C +C LQ + I
Sbjct: 5 VQRKEGLECKVCMNPFSDSIGYNIPRMLDCGHTVCHSCAESLQKVASDKRS--------I 56
Query: 96 SCPWCNLLSFRVVYKG---NLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
CP+ R V G N++ R+NY ++ ++++ N + + CED
Sbjct: 57 RCPF-----DRHVTDGFYENVENLRRNYAIIDLIQARNEEAGLAEEVICED 102
>gi|25395432|pir||H88071 protein ZK1240.3 [imported] - Caenorhabditis elegans
Length = 562
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 44 LECPICWESFNMVEN--VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
L+C +C E ++ ++ +P VL CGH++C+NC L A L I CP+C
Sbjct: 4 LQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNCATQLITA------------LLIICPFCR 51
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVESMNGD 132
+ + G+ + +KN+ L+ ++ M D
Sbjct: 52 ETT--EISDGDDQKLQKNFALVQAIQVMKAD 80
>gi|341874470|gb|EGT30405.1| hypothetical protein CAEBREN_21414 [Caenorhabditis brenneri]
Length = 466
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAV 81
++ CPIC ++M+ +P VLWCGHT+CK+C+ + V
Sbjct: 117 AMHCPICLNKYDMLTRIPLVLWCGHTMCKSCLEADKKRV 155
>gi|341874008|gb|EGT29943.1| hypothetical protein CAEBREN_29929 [Caenorhabditis brenneri]
Length = 463
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPW 99
+ECPIC F+ + P V+ CGHTLC+ C+ L + + LP+ + CP+
Sbjct: 112 IECPICNSEFDREKKTPKVMECGHTLCEECLTNLFSVNKELNSNRDTLPVPLCCPY 167
>gi|255558580|ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
gi|223540534|gb|EEF42101.1| F-box and wd40 domain protein, putative [Ricinus communis]
Length = 1794
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 10/56 (17%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
ECP+C ++++ +P VL CGHT C++C+ +LP + P I CP C
Sbjct: 5 ECPVCLQNYDGEYAIPRVLTCGHTTCESCL----------KSLPQKYPQTIRCPAC 50
>gi|341877942|gb|EGT33877.1| hypothetical protein CAEBREN_30250 [Caenorhabditis brenneri]
Length = 129
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 23/121 (19%)
Query: 39 SREESLECPICWESFNMVEN-VPYVL-WCGHTLCKNC---ILGLQWAVV-KFPTLPVQLP 92
SR + C IC F ++ VP +L CGH+LC NC ILG Q ++ F +P +P
Sbjct: 3 SRSGTALCQICQREFTDDDDLVPRILTECGHSLCTNCAKQILGNQKKILCPFDRIPTDVP 62
Query: 93 LFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSG 152
G++K +KNY +L M E R + G +D++ + G
Sbjct: 63 -----------------DGDVKKLKKNYTILQMKEEEKFRRKEQIKGAVKDKKKTRKNDG 105
Query: 153 S 153
+
Sbjct: 106 T 106
>gi|241741635|ref|XP_002414149.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508003|gb|EEC17457.1| conserved hypothetical protein [Ixodes scapularis]
Length = 443
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
E L CP+C +F+ E P L CGHTLC C+ LQ + F P+
Sbjct: 10 EFLSCPVCCRAFDGAERRPTSLGCGHTLCGRCLGQLQRRLCPFDQAPI 57
>gi|291408474|ref|XP_002720557.1| PREDICTED: tripartite motif-containing 32 [Oryctolagus cuniculus]
Length = 653
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|403266111|ref|XP_003925240.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Saimiri boliviensis
boliviensis]
Length = 653
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|350579556|ref|XP_003480637.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32-like [Sus scrofa]
Length = 652
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|444730241|gb|ELW70631.1| E3 ubiquitin-protein ligase TRIM32 [Tupaia chinensis]
Length = 653
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|386780686|ref|NP_001248279.1| E3 ubiquitin-protein ligase TRIM32 [Macaca mulatta]
gi|402896559|ref|XP_003911363.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Papio anubis]
gi|355753075|gb|EHH57121.1| E3 ubiquitin-protein ligase TRIM32 [Macaca fascicularis]
gi|380785435|gb|AFE64593.1| E3 ubiquitin-protein ligase TRIM32 [Macaca mulatta]
gi|383411299|gb|AFH28863.1| E3 ubiquitin-protein ligase TRIM32 [Macaca mulatta]
gi|384945906|gb|AFI36558.1| E3 ubiquitin-protein ligase TRIM32 [Macaca mulatta]
Length = 653
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|297685230|ref|XP_002820195.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 2 [Pongo
abelii]
Length = 653
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|114626363|ref|XP_001156898.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 1 [Pan
troglodytes]
gi|397526437|ref|XP_003833131.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Pan paniscus]
gi|410043073|ref|XP_003951556.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 2 [Pan
troglodytes]
gi|410043075|ref|XP_003951557.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 3 [Pan
troglodytes]
gi|426362840|ref|XP_004048560.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 1 [Gorilla
gorilla gorilla]
gi|426362842|ref|XP_004048561.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 2 [Gorilla
gorilla gorilla]
gi|410214416|gb|JAA04427.1| tripartite motif-containing 32 [Pan troglodytes]
gi|410267430|gb|JAA21681.1| tripartite motif-containing 32 [Pan troglodytes]
gi|410288092|gb|JAA22646.1| tripartite motif-containing 32 [Pan troglodytes]
gi|410329983|gb|JAA33938.1| tripartite motif containing 32 [Pan troglodytes]
Length = 653
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|332229855|ref|XP_003264102.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 1 [Nomascus
leucogenys]
gi|332229857|ref|XP_003264103.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 isoform 2 [Nomascus
leucogenys]
gi|441622713|ref|XP_004088856.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Nomascus leucogenys]
gi|441622716|ref|XP_004088857.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Nomascus leucogenys]
Length = 653
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|149756925|ref|XP_001504946.1| PREDICTED: e3 ubiquitin-protein ligase TRIM32 [Equus caballus]
Length = 653
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|153791514|ref|NP_001093149.1| E3 ubiquitin-protein ligase TRIM32 [Homo sapiens]
gi|153792582|ref|NP_036342.2| E3 ubiquitin-protein ligase TRIM32 [Homo sapiens]
gi|20178303|sp|Q13049.2|TRI32_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM32; AltName: Full=72
kDa Tat-interacting protein; AltName: Full=Tripartite
motif-containing protein 32; AltName: Full=Zinc finger
protein HT2A
gi|13111963|gb|AAH03154.1| Tripartite motif-containing 32 [Homo sapiens]
gi|119607852|gb|EAW87446.1| tripartite motif-containing 32, isoform CRA_a [Homo sapiens]
gi|119607853|gb|EAW87447.1| tripartite motif-containing 32, isoform CRA_a [Homo sapiens]
gi|123992810|gb|ABM84007.1| tripartite motif-containing 32 [synthetic construct]
gi|123999596|gb|ABM87341.1| tripartite motif-containing 32 [synthetic construct]
gi|208968827|dbj|BAG74252.1| tripartite motif-containing protein 32 [synthetic construct]
Length = 653
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|413958203|dbj|BAM66375.1| tripartite motif 32 [Felis catus]
Length = 654
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 17 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 66
Query: 102 LLS 104
++
Sbjct: 67 KIT 69
>gi|344272010|ref|XP_003407829.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32-like [Loxodonta
africana]
Length = 653
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|348586267|ref|XP_003478890.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32-like [Cavia
porcellus]
Length = 653
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|395824072|ref|XP_003785296.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Otolemur garnettii]
Length = 653
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|431900780|gb|ELK08221.1| Tripartite motif-containing protein 32 [Pteropus alecto]
Length = 653
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|281343699|gb|EFB19283.1| hypothetical protein PANDA_018308 [Ailuropoda melanoleuca]
Length = 652
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 15 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 64
Query: 102 LLS 104
++
Sbjct: 65 KIT 67
>gi|296190678|ref|XP_002806562.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM32
[Callithrix jacchus]
Length = 653
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|148699134|gb|EDL31081.1| tripartite motif protein 32, isoform CRA_a [Mus musculus]
Length = 666
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 28 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 77
Query: 102 LLS 104
++
Sbjct: 78 KIT 80
>gi|239937489|ref|NP_444314.2| E3 ubiquitin-protein ligase TRIM32 [Mus musculus]
gi|239937491|ref|NP_001155254.1| E3 ubiquitin-protein ligase TRIM32 [Mus musculus]
gi|55976522|sp|Q8CH72.2|TRI32_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM32; AltName:
Full=Tripartite motif-containing protein 32
gi|21706608|gb|AAH34104.1| Tripartite motif-containing 32 [Mus musculus]
gi|74147716|dbj|BAE38729.1| unnamed protein product [Mus musculus]
gi|74180308|dbj|BAE32325.1| unnamed protein product [Mus musculus]
gi|148699135|gb|EDL31082.1| tripartite motif protein 32, isoform CRA_b [Mus musculus]
Length = 655
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 17 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 66
Query: 102 LLS 104
++
Sbjct: 67 KIT 69
>gi|410978945|ref|XP_003995847.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Felis catus]
Length = 672
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 35 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 84
Query: 102 LLS 104
++
Sbjct: 85 KIT 87
>gi|356518567|ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
Length = 1815
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E ECP+C +SF+ + +P VL CGH++C+ C+ LP + I CP C
Sbjct: 2 EPPECPVCLQSFDERDAIPRVLSCGHSVCEACL----------AELPQRYQDTIRCPACT 51
Query: 102 LLSFRVVYKGNLKFPRKNYFLL 123
L +G P KN LL
Sbjct: 52 QLVKYPSQQGPSSLP-KNIDLL 72
>gi|58865776|ref|NP_001012103.1| E3 ubiquitin-protein ligase TRIM32 [Rattus norvegicus]
gi|51858707|gb|AAH81980.1| Tripartite motif protein 32 [Rattus norvegicus]
gi|60551553|gb|AAH91385.1| Tripartite motif protein 32 [Rattus norvegicus]
gi|149059569|gb|EDM10507.1| tripartite motif protein 32 [Rattus norvegicus]
Length = 655
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 17 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 66
Query: 102 LLS 104
++
Sbjct: 67 KIT 69
>gi|301785928|ref|XP_002928379.1| PREDICTED: e3 ubiquitin-protein ligase TRIM32-like [Ailuropoda
melanoleuca]
Length = 655
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 18 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 67
Query: 102 LLS 104
++
Sbjct: 68 KIT 70
>gi|168013268|ref|XP_001759323.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689636|gb|EDQ76007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 886
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ--WAVVKFPTLPVQLP---LFISCP 98
+EC +C + ++ E+ P VL CGH++C++C+ LQ W + + CP
Sbjct: 3 VECAVCLQVYDEGEHTPRVLSCGHSVCQSCVAELQLHWGAGSGEAQAQRTQGGGGLVRCP 62
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSG 139
C + +V G L P KN L+ +++++ R+ +SG
Sbjct: 63 ECKQHT-KVPLGGRLALP-KNIELMRLIQAVPPPRIARNSG 101
>gi|165972387|ref|NP_001107066.1| E3 ubiquitin-protein ligase TRIM32 [Danio rerio]
gi|159155666|gb|AAI54642.1| Trim32 protein [Danio rerio]
gi|213627619|gb|AAI71687.1| Tripartite motif-containing 32 [Danio rerio]
gi|213627846|gb|AAI71691.1| Tripartite motif-containing 32 [Danio rerio]
Length = 663
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC E++N + P +L CGH++C+ C+ L + + + CP+C+
Sbjct: 14 EVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTIN----------GVRCPFCS 63
Query: 102 LLS 104
+S
Sbjct: 64 KVS 66
>gi|27436083|gb|AAO13297.1|AF347694_1 putative oncogene Trim32 [Mus musculus]
Length = 655
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 17 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 66
Query: 102 LLS 104
++
Sbjct: 67 KIT 69
>gi|145518966|ref|XP_001445355.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412799|emb|CAK77958.1| unnamed protein product [Paramecium tetraurelia]
Length = 653
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 24/122 (19%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E L CP C FN +N+P +L CGHT+C+NCI Q ++ +I CP
Sbjct: 5 EELICPECQMMFNESDNLPLMLPDCGHTICQNCI---QQMLINKK--------YIVCPED 53
Query: 101 NLLSFRVVYKGNL-KFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQ 159
+++ K ++ +FP KN LL MV VK + + + RQ A + + Q
Sbjct: 54 GIMAKN---KNDISQFP-KNCQLLKMV-------VKHKTQYQQSRQSARNDDSDIGYQLQ 102
Query: 160 LN 161
LN
Sbjct: 103 LN 104
>gi|332833442|ref|XP_528658.3| PREDICTED: RING finger protein 208 [Pan troglodytes]
Length = 336
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C S+N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 214 EPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 265
>gi|268563703|ref|XP_002638910.1| Hypothetical protein CBG22136 [Caenorhabditis briggsae]
Length = 306
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL-QWAVVKFPTLPVQLPL 93
+S R + C +C E ++ + P +L C HT+C++C+ L + + P L Q +
Sbjct: 8 TSTAPRVRTPACQVCLEPYDGKLHTPKILQCAHTVCQSCMNALEEQGRRRVPNLE-QTMV 66
Query: 94 FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
+SCP C R + + + R NY L+ +VE+ D SHS
Sbjct: 67 SVSCPIC-----RTITQTSRCCIRTNYQLIDVVEAYGID--ASHS 104
>gi|348574456|ref|XP_003473006.1| PREDICTED: hypothetical protein LOC100714864 [Cavia porcellus]
Length = 665
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 543 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 594
>gi|359492369|ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
Length = 1817
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C ++++ + +P VL CGHT C+ CI LP + I CP C L
Sbjct: 7 ECPVCLQTYDTDQAIPRVLACGHTACEACI----------THLPQRFLDTIRCPACTQLV 56
Query: 105 FRVVYKGNLKFPRKNYFLLWMVESMNGDRVK 135
+G P KN LL + S + D K
Sbjct: 57 KFSHLQGPSALP-KNIDLLRLCLSEDSDYQK 86
>gi|395505589|ref|XP_003757122.1| PREDICTED: E3 ubiquitin-protein ligase TRIM32 [Sarcophilus
harrisii]
Length = 647
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF P +L CGHT+C++C+ L + + CP+C+
Sbjct: 14 EVLECPICLESFTEEVLRPKLLHCGHTVCRHCLEKLLANTIN----------GVRCPFCS 63
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVES 128
+V NL N +L ++++
Sbjct: 64 ----KVTRITNLSLLADNLTILKIIDT 86
>gi|341884781|gb|EGT40716.1| hypothetical protein CAEBREN_24309 [Caenorhabditis brenneri]
Length = 149
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 32 DDVSSVVSREESL-ECPICWESFNMVEN---VPYVLWCGHTLCKNCILGL-QWAVVKFPT 86
+ V+S + E L EC IC ++ VPY CGHT+CK C+ L Q K
Sbjct: 46 NKVNSETEKVEELSECKICTNQYDHHHGSNFVPYQFECGHTVCKTCVQELFQKRFEKIKP 105
Query: 87 LPV-QLPLFISCPWC 100
P + P+ I+CP+C
Sbjct: 106 QPARETPMIINCPFC 120
>gi|159163934|pdb|2CT2|A Chain A, Solution Structure Of The Ring Domain Of The Tripartite
Motif Protein 32
Length = 88
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 63
Query: 102 LLS 104
++
Sbjct: 64 KIT 66
>gi|344250556|gb|EGW06660.1| RING finger protein 183 [Cricetulus griseus]
Length = 426
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 7 TCLAGNVGLKNDSLKASEAASECS--DDDVSSVVSREESLECPICWESFNMVENVPYVLW 64
TC++ + G + +A++ + E D ++ +E + ECP+CW FN + P VL
Sbjct: 206 TCISCSSGFGGEGCEATDISCEAPACDPRMAEPQGQELTAECPVCWNPFNNTFHTPKVLD 265
Query: 65 CGHTLCKNCI 74
C H+ C C+
Sbjct: 266 CCHSFCVECL 275
>gi|410904295|ref|XP_003965627.1| PREDICTED: RING finger and CCCH-type zinc finger domain-containing
protein 2-like [Takifugu rubripes]
Length = 1116
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L CPIC+ F+ E+ P L C HT+CK C+ L F P+ + + C
Sbjct: 10 EFLSCPICYNEFDSSEHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTDIDLLPVNCA 69
Query: 102 LLSF 105
LL
Sbjct: 70 LLQL 73
>gi|341895878|gb|EGT51813.1| hypothetical protein CAEBREN_13789 [Caenorhabditis brenneri]
Length = 475
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 22/114 (19%)
Query: 38 VSREESLECPICWESF--NMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 94
++ +ESLEC +C F N+ NVP +L CGHT+C C L LQ L
Sbjct: 115 IANDESLECKVCVAPFSDNIQGNVPRILPACGHTICHTCALTLQKQSTN--------KLS 166
Query: 95 ISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRV-----KSHSGFCED 143
I+CP+ ++ V NL PR N+ ++ ++ G+R K + CED
Sbjct: 167 IACPFDRTVTN--VIAANL--PR-NFAIVELIRE-RGERAELAEKKKAAEICED 214
>gi|126293989|ref|XP_001364618.1| PREDICTED: e3 ubiquitin-protein ligase TRIM32 [Monodelphis
domestica]
Length = 647
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF P +L CGHT+C++C+ L + + + CP+C+
Sbjct: 14 EVLECPICLESFTEDVLRPKLLHCGHTVCRHCLEKLLASSIN----------GVRCPFCS 63
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVES 128
++ NL N +L ++++
Sbjct: 64 ----KITRITNLSLLADNLTILKIIDT 86
>gi|341898779|gb|EGT54714.1| hypothetical protein CAEBREN_20016 [Caenorhabditis brenneri]
Length = 143
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 45 ECPICWESFNMV--ENVPYVLWCGHTLCKNCILGLQWA 80
ECPIC+E++++ E P +L CGHTLC CI G+ A
Sbjct: 76 ECPICFETYSLARAETKPRILHCGHTLCNQCIRGMMAA 113
>gi|17509101|ref|NP_491266.1| Protein T20F5.6 [Caenorhabditis elegans]
gi|351060151|emb|CCD67781.1| Protein T20F5.6 [Caenorhabditis elegans]
Length = 794
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 23 SEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E E D ++S + + L C IC++ FN + +P V CGHT+C CI L
Sbjct: 93 KEKEDEADDTILTSKGTEMKGLSCGICYDPFNTGKRIPKVFPCGHTICLQCIKKL 147
>gi|302785231|ref|XP_002974387.1| hypothetical protein SELMODRAFT_9033 [Selaginella moellendorffii]
gi|302807979|ref|XP_002985684.1| hypothetical protein SELMODRAFT_9032 [Selaginella moellendorffii]
gi|300146593|gb|EFJ13262.1| hypothetical protein SELMODRAFT_9032 [Selaginella moellendorffii]
gi|300157985|gb|EFJ24609.1| hypothetical protein SELMODRAFT_9033 [Selaginella moellendorffii]
Length = 67
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
LECP+C E FN + P +L CGHT+C+ C+ L + LP F CP C L
Sbjct: 1 LECPVCLEFFNDGSHTPRLLCCGHTVCQLCVERL--------VVSSSLPRF-RCPECRAL 51
Query: 104 SFRVVYKGNLKFPRKNYFLL 123
S ++G FP KNY LL
Sbjct: 52 S---KWRGIHHFP-KNYILL 67
>gi|16303800|gb|AAL16809.1|AF416715_1 unknown [Homo sapiens]
gi|12044469|emb|CAB66475.1| hypothetical protein [Homo sapiens]
gi|16877424|gb|AAH16958.1| RNF208 protein [Homo sapiens]
gi|117645914|emb|CAL38424.1| hypothetical protein [synthetic construct]
Length = 180
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C S+N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 58 EPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 109
>gi|9955545|emb|CAC05430.1| ankyrin-repeat containing protein [Arabidopsis thaliana]
Length = 834
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N E VP +L CGH CK+C+ + F T ++CP C +S
Sbjct: 10 CSVCHTRYNEDERVPLLLQCGHGFCKDCLSKM------FST---SSDTTLTCPRCRHVS- 59
Query: 106 RVVYKGNLKFPRKNYFLLWMVESMNG 131
V +++ RKNY +L ++ + +G
Sbjct: 60 --VVGNSVQGLRKNYAMLALIHAASG 83
>gi|308463883|ref|XP_003094212.1| hypothetical protein CRE_10601 [Caenorhabditis remanei]
gi|308248060|gb|EFO92012.1| hypothetical protein CRE_10601 [Caenorhabditis remanei]
Length = 233
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQL 91
D V ++ LEC IC E ++ +P +L CGH++C C+ LQ F
Sbjct: 152 DTQIPVRQQLRLECNICLEDYSKTR-IPRILKECGHSVCDECVGQLQKINRNF------- 203
Query: 92 PLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVE 127
+ CP C R+ Y K P KNY L+ ++E
Sbjct: 204 -FCVVCPTCR----RITYTTRSKLP-KNYALIGLME 233
>gi|341895880|gb|EGT51815.1| hypothetical protein CAEBREN_14855 [Caenorhabditis brenneri]
Length = 408
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 16/98 (16%)
Query: 39 SREESLECPICWESFN--MVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ SLEC IC E ++ + N+P +L CGHTLC +C LQ P + L I
Sbjct: 28 SKQVSLECKICNEEYSDTIYSNIPRILSGCGHTLCHSCAETLQLMS---PDI-----LSI 79
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDR 133
CP+ R+ K + KN+ ++ ++ GD
Sbjct: 80 DCPF-----DRITTKVKVDKLHKNFAIIELIMEKGGDE 112
>gi|405978709|gb|EKC43078.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 633
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
+ EE+ CPIC+ESF P +L C HT C NC+ + K PV P CP
Sbjct: 12 TTEETTTCPICFESFL----TPRILPCSHTFCHNCLSSYIISTCKTKESPVGFP----CP 63
Query: 99 WC 100
C
Sbjct: 64 LC 65
>gi|355716871|gb|AES05752.1| ring finger protein 208 [Mustela putorius furo]
Length = 263
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S ++ + E LECP C ++N+ + P VL C H++C+ C+ L + K+
Sbjct: 130 SGPPATAAPASGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 184
Query: 90 QLPLFISCPWCN 101
FISCP C
Sbjct: 185 ---KFISCPTCR 193
>gi|20988143|gb|AAH30073.1| Rnf208 protein [Mus musculus]
Length = 183
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S S V E LECP C ++N+ + P VL C H++C+ C+ L + K+
Sbjct: 49 SAPSSSGPVIAGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 103
Query: 90 QLPLFISCPWCN 101
FISCP C+
Sbjct: 104 ---KFISCPTCH 112
>gi|383135236|gb|AFG48610.1| hypothetical protein 0_11675_01, partial [Pinus taeda]
Length = 117
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 18/99 (18%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISC---P 98
E ECP+CW++F+ +P +L CGHT+C+ C+ LP+++ L C P
Sbjct: 2 EVPECPVCWDTFDRDICMPRLLRCGHTVCQLCL----------KCLPIEVKLGQRCLRYP 51
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSH 137
C + V++ + P KNY LL +++S + D +SH
Sbjct: 52 ECRI---PCVWRKAHELP-KNYILLCVMDS-SSDTGRSH 85
>gi|344251297|gb|EGW07401.1| RING finger protein 208 [Cricetulus griseus]
Length = 236
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S S V E LECP C ++N+ + P VL C H++C+ C+ L + K+
Sbjct: 102 SAPSSSGPVIAGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 156
Query: 90 QLPLFISCPWC 100
FISCP C
Sbjct: 157 ---KFISCPTC 164
>gi|403335137|gb|EJY66741.1| Kelch motif family protein [Oxytricha trifallax]
gi|403376180|gb|EJY88072.1| Kelch motif family protein [Oxytricha trifallax]
Length = 751
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 12/57 (21%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
+ECP C+E F+ + VP L CGHT C+ C++ ++ + F CP C
Sbjct: 1 MECPSCYEYFDDITRVPRNLNCGHTFCEECLVKIEEQKMTF------------CPIC 45
>gi|119220603|ref|NP_112587.2| RING finger protein 208 [Homo sapiens]
gi|397492272|ref|XP_003817051.1| PREDICTED: RING finger protein 208 [Pan paniscus]
gi|426363716|ref|XP_004048980.1| PREDICTED: RING finger protein 208 [Gorilla gorilla gorilla]
gi|239938696|sp|Q9H0X6.2|RN208_HUMAN RecName: Full=RING finger protein 208
gi|410288800|gb|JAA23000.1| ring finger protein 208 [Pan troglodytes]
Length = 261
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C S+N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 139 EPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 190
>gi|341876118|gb|EGT32053.1| hypothetical protein CAEBREN_07415 [Caenorhabditis brenneri]
Length = 313
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 16 KNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMV--ENVPYVLWCGHTLCKNC 73
K D + + + S+ S +D V+ C IC F+ P +L CGHTLC NC
Sbjct: 203 KKDDVVSEASDSDSSVEDAMDSVTELSVTTCKICLRGFSETSKRRAPLMLRCGHTLCWNC 262
Query: 74 ILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDR 133
L+ L + ++CP+C + + +L+ KNY ++ M++ N R
Sbjct: 263 CKELK---------KQNLYMHVTCPFCR----KETFCDSLEELPKNYAVIEMIQMKNQRR 309
Query: 134 V 134
+
Sbjct: 310 L 310
>gi|321478015|gb|EFX88973.1| hypothetical protein DAPPUDRAFT_12194 [Daphnia pulex]
Length = 449
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CPIC F+ V+ P L CGHTLCK C+ L
Sbjct: 10 EFLSCPICRHEFDRVQRQPISLACGHTLCKTCLSKL 45
>gi|410979573|ref|XP_003996157.1| PREDICTED: RING finger protein 208 [Felis catus]
Length = 265
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S ++ + E LECP C ++N+ + P VL C H++C+ C+ L + K+
Sbjct: 131 SGPPATAAPASGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 185
Query: 90 QLPLFISCPWCN 101
FISCP C
Sbjct: 186 ---KFISCPTCR 194
>gi|758423|gb|AAA86474.1| zinc-finger protein [Homo sapiens]
Length = 653
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ES + P +L CGHT+C+ C+ L + + + CP+C+
Sbjct: 16 EVLECPICMESITEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLS 104
++
Sbjct: 66 KIT 68
>gi|308486749|ref|XP_003105571.1| hypothetical protein CRE_22387 [Caenorhabditis remanei]
gi|308255537|gb|EFO99489.1| hypothetical protein CRE_22387 [Caenorhabditis remanei]
Length = 193
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
SV + +++ C IC E+++ E +P VL CGHT+C C+ L+ +
Sbjct: 119 TGSVQTNRDAMSCGICLENYDNDEKLPKVLDCGHTICLVCLDSLEKSN----------GH 168
Query: 94 FISCPWC 100
+SCP+C
Sbjct: 169 LVSCPFC 175
>gi|301781536|ref|XP_002926170.1| PREDICTED: RING finger protein 208-like [Ailuropoda melanoleuca]
gi|281345338|gb|EFB20922.1| hypothetical protein PANDA_015801 [Ailuropoda melanoleuca]
Length = 267
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S ++ + E LECP C ++N+ + P VL C H++C+ C+ L + K+
Sbjct: 133 SGPPATAAPASGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 187
Query: 90 QLPLFISCPWCN 101
FISCP C
Sbjct: 188 ---KFISCPTCR 196
>gi|341895845|gb|EGT51780.1| hypothetical protein CAEBREN_05372 [Caenorhabditis brenneri]
Length = 977
Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 27 SECSDDDVSSVVS----REESLECPICWESFN--MVENVPYVL-WCGHTLCKNCILGLQW 79
SE D V+ V S REES+EC +C F+ + +N+P +L CGHT+C +C + +Q
Sbjct: 100 SEEHDQSVTHVFSESSAREESVECQVCLAPFSDHIEDNIPRILSACGHTICHSCAVNIQT 159
Query: 80 AVVKFPTLPVQLPLFISCPWCNLLS 104
L I+CP+ +++
Sbjct: 160 MTSN--------RLVIACPFDRIIT 176
Score = 41.6 bits (96), Expect = 0.34, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 18 DSLKASEAASECSDDDVSSVVSR---EESLECPICWESFN--MVENVPYVL-WCGHTLCK 71
D + + SE D +V S+ EESL+C +C F+ + VP +L CGHT+C
Sbjct: 593 DVIMVNNLESEAHDLNVIRFFSKSANEESLDCKVCLAPFSDHIAGKVPRILPACGHTICH 652
Query: 72 NCILGLQ 78
C L LQ
Sbjct: 653 TCALTLQ 659
>gi|119395756|ref|NP_789804.2| RING finger protein 208 [Mus musculus]
gi|157822149|ref|NP_001102665.1| RING finger protein 208 [Rattus norvegicus]
gi|239938697|sp|Q8K0W3.2|RN208_MOUSE RecName: Full=RING finger protein 208
gi|148676271|gb|EDL08218.1| RIKEN cDNA 1110061N23 [Mus musculus]
gi|149039405|gb|EDL93625.1| rCG45886 [Rattus norvegicus]
Length = 265
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S S V E LECP C ++N+ + P VL C H++C+ C+ L + K+
Sbjct: 131 SAPSSSGPVIAGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 185
Query: 90 QLPLFISCPWCN 101
FISCP C+
Sbjct: 186 ---KFISCPTCH 194
>gi|341878189|gb|EGT34124.1| hypothetical protein CAEBREN_00609 [Caenorhabditis brenneri]
Length = 316
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
EC IC +++ ++P +L C HT+C CI L+ + ++I CP C +L+
Sbjct: 20 ECRICTVAYDDNRHLPKILQCAHTICNACINVLEAEGRRRAGNMDMTQVYIVCPVCRMLT 79
Query: 105 FRVVYKGNLKFPRKNYFLLWMVESMNGD 132
+ R NY L+ +V+ M G+
Sbjct: 80 -----QAPRNSIRTNYQLIDVVDVMRGE 102
>gi|354503358|ref|XP_003513748.1| PREDICTED: RING finger protein 208-like [Cricetulus griseus]
Length = 265
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S S V E LECP C ++N+ + P VL C H++C+ C+ L + K+
Sbjct: 131 SAPSSSGPVIAGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 185
Query: 90 QLPLFISCPWCN 101
FISCP C+
Sbjct: 186 ---KFISCPTCH 194
>gi|392889325|ref|NP_494244.2| Protein F43C11.8 [Caenorhabditis elegans]
gi|351061780|emb|CCD69626.1| Protein F43C11.8 [Caenorhabditis elegans]
Length = 323
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 44 LECPICWESFNMV--ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+EC IC E F+ EN+P +L CGHT+C C L +Q + + CP+C
Sbjct: 4 IECEICNEDFSSATDENIPRILRCGHTICHGCAEKL-----------LQNSMIL-CPFCR 51
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVE 127
+K +KN+ LL VE
Sbjct: 52 ----EATNVSTVKDLQKNFALLQAVE 73
>gi|307204934|gb|EFN83473.1| Roquin [Harpegnathos saltator]
Length = 954
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
E L CPIC F++ E P L CGHT+C+ C+ L
Sbjct: 10 EYLSCPICCHEFDVAERGPISLGCGHTICRTCLANLH 46
>gi|156400090|ref|XP_001638833.1| predicted protein [Nematostella vectensis]
gi|156225957|gb|EDO46770.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCI-------LGLQWAVVKFPTLPVQLPLFISCP 98
C +C E FN VP +L C HTLCK C+ G+ + CP
Sbjct: 17 CGVCQEEFNEKTRVPKLLHCSHTLCKACVSALLGGGRGMYREMNSILYGRANDHDSFKCP 76
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDR----VKSHSGFCEDR 144
+CN + +V +GN+ N +L +++ G++ +K C+DR
Sbjct: 77 FCN--ARQVTEQGNVDNLPNNLTILRLLDFTEGNQAAKELKKMVEKCKDR 124
>gi|47212248|emb|CAF93161.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1067
Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L CPIC+ F+ E+ P L C HT+CK C+ L F P+ + + C
Sbjct: 10 EFLSCPICYHEFDGGEHQPTSLGCSHTVCKTCLHKLHRKACPFDQTPISTDIDLLPVNCA 69
Query: 102 LLSF 105
LL
Sbjct: 70 LLQL 73
>gi|410896640|ref|XP_003961807.1| PREDICTED: zinc-binding protein A33-like [Takifugu rubripes]
Length = 463
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
EE L CPIC + FN+ + P CGH CK CI G W + + P PV
Sbjct: 10 EELLLCPICLDLFNLPISTP----CGHNFCKECIQGY-WEIAELPQCPV 53
>gi|403345059|gb|EJY71886.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1278
Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 46 CPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
CP C FN +P +L +CGHT C++CI L ++ T Q +++CP C+ +
Sbjct: 3 CPNCQLEFNSTVQIPRILIFCGHTFCQSCIESL----LQQSTDEAQGKTYLNCPECD--T 56
Query: 105 FRVVYKGNLKFPRKNYFLLWM 125
V G FP KN LL M
Sbjct: 57 QNVANDGINSFP-KNLVLLQM 76
>gi|403345056|gb|EJY71884.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1281
Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 46 CPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
CP C FN +P +L +CGHT C++CI L ++ T Q +++CP C+ +
Sbjct: 3 CPNCQLEFNSTVQIPRILIFCGHTFCQSCIESL----LQQSTDEAQGKTYLNCPECD--T 56
Query: 105 FRVVYKGNLKFPRKNYFLLWM 125
V G FP KN LL M
Sbjct: 57 QNVANDGINSFP-KNLVLLQM 76
>gi|57092151|ref|XP_548354.1| PREDICTED: RING finger protein 208 [Canis lupus familiaris]
Length = 265
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S ++ + E LECP C ++N+ + P VL C H++C+ C+ L + K+
Sbjct: 131 SGAPATAAPASGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY----- 185
Query: 90 QLPLFISCPWCN 101
FISCP C
Sbjct: 186 ---KFISCPTCR 194
>gi|296191252|ref|XP_002806587.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 208 [Callithrix
jacchus]
Length = 261
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 190
>gi|168061471|ref|XP_001782712.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665805|gb|EDQ52477.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 264
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
+CP+CW+ F+ +P +L CGHT+C+ C+ L F + Q + CP C +
Sbjct: 22 DCPVCWDGFDDGPRMPRLLHCGHTICQVCLQQL-----LFESGLGQ--RCVRCPECRGV- 73
Query: 105 FRVVYKGNLKFPRKNYFLLWMVES 128
V++G + P KNY LL ++ S
Sbjct: 74 --CVWRGLQELP-KNYILLRVISS 94
>gi|440901636|gb|ELR52537.1| E3 ubiquitin-protein ligase TRIM32 [Bos grunniens mutus]
Length = 650
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C C+ L + + + CP+C+
Sbjct: 16 EVLECPICLESFTEEQLRPKLLHCGHTICCRCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLSF 105
++
Sbjct: 66 KITL 69
>gi|115496330|ref|NP_001069292.1| E3 ubiquitin-protein ligase TRIM32 [Bos taurus]
gi|111308537|gb|AAI20074.1| Tripartite motif-containing 32 [Bos taurus]
gi|296484337|tpg|DAA26452.1| TPA: tripartite motif-containing 32 [Bos taurus]
Length = 653
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC ESF + P +L CGHT+C C+ L + + + CP+C+
Sbjct: 16 EVLECPICLESFTEEQLRPKLLHCGHTICCRCLEKLLASSIN----------GVRCPFCS 65
Query: 102 LLSF 105
++
Sbjct: 66 KITL 69
>gi|351705279|gb|EHB08198.1| RING finger protein 208 [Heterocephalus glaber]
Length = 251
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 129 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 180
>gi|426222112|ref|XP_004005247.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM32
[Ovis aries]
Length = 574
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E LECPIC ESF + P +L CGHT+C C+ L + + + CP+C
Sbjct: 15 REVLECPICMESFTEEQLRPKLLHCGHTICCQCLEKLLASSIN----------GVRCPFC 64
Query: 101 NLLSF 105
+ ++
Sbjct: 65 SKITL 69
>gi|395506530|ref|XP_003757585.1| PREDICTED: RING finger protein 208 [Sarcophilus harrisii]
Length = 251
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 130 EPLECPTCGHTYNLTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 181
>gi|126302657|ref|XP_001367091.1| PREDICTED: RING finger protein 208-like [Monodelphis domestica]
Length = 251
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 130 EPLECPTCGHTYNLTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 181
>gi|344309902|ref|XP_003423613.1| PREDICTED: RING finger protein 208-like, partial [Loxodonta
africana]
Length = 248
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C+
Sbjct: 126 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCH 177
>gi|355567298|gb|EHH23639.1| hypothetical protein EGK_07146 [Macaca mulatta]
Length = 180
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 58 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 109
>gi|308456446|ref|XP_003090663.1| hypothetical protein CRE_23780 [Caenorhabditis remanei]
gi|308261316|gb|EFP05269.1| hypothetical protein CRE_23780 [Caenorhabditis remanei]
Length = 193
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E++ C +C + +N EN+P VL CGHT+C C+ L + ++CP+C
Sbjct: 127 EDAPSCEVCTDEYNEDENMPKVLGCGHTICSKCLKNLD-----------KYNNSVNCPFC 175
>gi|383872608|ref|NP_001244584.1| RING finger protein 208 [Macaca mulatta]
gi|380786659|gb|AFE65205.1| RING finger protein 208 [Macaca mulatta]
gi|384940968|gb|AFI34089.1| RING finger protein 208 [Macaca mulatta]
Length = 261
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 190
>gi|297685823|ref|XP_002820473.1| PREDICTED: RING finger protein 208 [Pongo abelii]
Length = 261
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 190
>gi|395844204|ref|XP_003794852.1| PREDICTED: RING finger protein 208 [Otolemur garnettii]
Length = 266
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 144 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 195
>gi|402895968|ref|XP_003911082.1| PREDICTED: RING finger protein 208 [Papio anubis]
Length = 261
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 190
>gi|403301420|ref|XP_003941388.1| PREDICTED: RING finger protein 208 [Saimiri boliviensis
boliviensis]
Length = 261
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 139 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 190
>gi|291234992|ref|XP_002737430.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 680
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 25 AASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
AASE DDD E+ L C IC E + + P +L C HT CK C++ L V
Sbjct: 4 AASEVIDDDAVLAEINEDFLCCAICLERY----SAPKILPCQHTFCKKCLVQLAKKVA-- 57
Query: 85 PTLPVQLPLFISCPWCN 101
P CP CN
Sbjct: 58 -------PNTFMCPTCN 67
>gi|327288387|ref|XP_003228908.1| PREDICTED: phosphorylated CTD-interacting factor 1-like [Anolis
carolinensis]
Length = 860
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 22 ASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL---- 77
AS+ DD ++ E EC IC++ F++ P L CGH C C+ +
Sbjct: 580 ASQRGDGWDADDSDAMSRSPEGPECQICYDRFDLRSRRPKRLLCGHCACARCLRRMAESA 639
Query: 78 QWAVVKFPTLPVQLPLFISCPWCN 101
+W ++ P +L SCP+C
Sbjct: 640 EWGALEALGSPARL----SCPFCR 659
>gi|355752901|gb|EHH56947.1| hypothetical protein EGM_06466, partial [Macaca fascicularis]
Length = 166
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 47 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 98
>gi|390356333|ref|XP_003728759.1| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 500
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
SLEC IC ++ N P +L C HT CK C+ L A V LP CP C
Sbjct: 8 SLECSICLKTINE----PKLLTCSHTFCKACLERLSDAQVNRTVLP--------CPICKK 55
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQP 146
S V KG + + L +V+ M R S C+ +P
Sbjct: 56 TS--AVPKGEVGNLQTYQALKSVVDDMKNKRHNCTS--CDKEKP 95
>gi|390355820|ref|XP_003728633.1| PREDICTED: uncharacterized protein LOC585395 [Strongylocentrotus
purpuratus]
Length = 619
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
SLEC IC ++ N P +L C HT CK C+ L A V LP CP C
Sbjct: 8 SLECSICLKTINE----PKLLTCSHTFCKACLERLSDAQVNRTVLP--------CPICKK 55
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASS 149
S V KG + + L +V+ M R S C+ +P ++
Sbjct: 56 TS--AVPKGEVGNLQTYQALKSVVDDMKNKRHNCTS--CDKEKPPAA 98
>gi|118344162|ref|NP_001071903.1| zinc finger protein [Ciona intestinalis]
gi|92081480|dbj|BAE93287.1| zinc finger protein [Ciona intestinalis]
Length = 585
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
LEC +C E F++ E VP +L CGH+ C +C+ LPVQ + CP
Sbjct: 30 LECGVCGEQFSLSGEKVPRLLLCGHSFCHDCL----------TRLPVQAHTLV-CPMDRQ 78
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMN--GDRV 134
++ V G + +KN+ L+ ++E + G R+
Sbjct: 79 ITD--VGSGGVWGLKKNFALIELMEKLQLGGTRI 110
>gi|308498149|ref|XP_003111261.1| hypothetical protein CRE_03727 [Caenorhabditis remanei]
gi|308240809|gb|EFO84761.1| hypothetical protein CRE_03727 [Caenorhabditis remanei]
Length = 379
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
CPIC E F+ N+P VL CGH++C NC+ L +V + ++ +SCP C
Sbjct: 25 CPICKEEFDPKLNIPKVLNCGHSICVNCLKRLLESVQVSYSGNGEVFTSLSCPIC 79
>gi|170586816|ref|XP_001898175.1| Conserved hypothetical protein [Brugia malayi]
gi|158594570|gb|EDP33154.1| Conserved hypothetical protein, putative [Brugia malayi]
Length = 175
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
DD V +L CP+C F + + P++L CGH+ C+NCI + + Q+
Sbjct: 29 DDAERVAIDSSALHCPVC---FCVFASAPFILKCGHSFCQNCIKNIVE-----NSYSEQI 80
Query: 92 PLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESM 129
CP C R V ++F R NY + +++S+
Sbjct: 81 ---FECPMC-----RQVISSEIRFTR-NYIVDALLQSV 109
>gi|311246928|ref|XP_003122395.1| PREDICTED: RING finger protein 208-like [Sus scrofa]
Length = 265
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 194
>gi|431899048|gb|ELK07418.1| RING finger protein 208 [Pteropus alecto]
Length = 265
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 194
>gi|125817281|ref|XP_001333631.1| PREDICTED: RING finger protein 186 isoform 1 [Danio rerio]
gi|292614184|ref|XP_002662175.1| PREDICTED: RING finger protein 186 [Danio rerio]
gi|292614244|ref|XP_002662202.1| PREDICTED: RING finger protein 186-like [Danio rerio]
Length = 187
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 31 DDDVSSVVSRE-ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
D D + SR+ L+C +C+ ++N+ E +P L+CGHT C+ C+ L TL +
Sbjct: 40 DADAGAQNSRDSRKLDCIVCYSAYNLGERLPRKLYCGHTFCQACLKRLD-------TL-I 91
Query: 90 QLPLFISCPWC 100
++I CP C
Sbjct: 92 NEQMWIPCPQC 102
>gi|149759081|ref|XP_001491564.1| PREDICTED: RING finger protein 208-like [Equus caballus]
Length = 265
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 194
>gi|334187662|ref|NP_001190303.1| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
gi|332004526|gb|AED91909.1| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
Length = 1624
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N E VP +L CGH CK+C+ + F T ++CP C +S
Sbjct: 10 CSVCHTRYNEDERVPLLLQCGHGFCKDCLSKM------FST---SSDTTLTCPRCRHVS- 59
Query: 106 RVVYKGNLKFPRKNYFLLWMVESMNG 131
V +++ RKNY +L ++ + +G
Sbjct: 60 --VVGNSVQGLRKNYAMLALIHAASG 83
>gi|186522588|ref|NP_196857.2| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
gi|218526495|sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName:
Full=Protein KEEP ON GOING; AltName: Full=RING finger
protein KEG
gi|83817349|gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thaliana]
gi|332004525|gb|AED91908.1| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
Length = 1625
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N E VP +L CGH CK+C+ + F T ++CP C +S
Sbjct: 10 CSVCHTRYNEDERVPLLLQCGHGFCKDCLSKM------FST---SSDTTLTCPRCRHVS- 59
Query: 106 RVVYKGNLKFPRKNYFLLWMVESMNG 131
V +++ RKNY +L ++ + +G
Sbjct: 60 --VVGNSVQGLRKNYAMLALIHAASG 83
>gi|351708493|gb|EHB11412.1| Roquin [Heterocephalus glaber]
Length = 393
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+L L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLLNLHCKACPF 52
>gi|341876595|gb|EGT32530.1| hypothetical protein CAEBREN_02584 [Caenorhabditis brenneri]
Length = 797
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 17/88 (19%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFIS-----CPWC 100
C IC++ FN + +P V CGHT C +C+ GL F+S CP C
Sbjct: 122 CMICYDPFNTEKRIPKVFPCGHTFCLSCVQGLMKNRT-----------FMSSSTVYCPTC 170
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVES 128
+ + G K P N+ +L M+E
Sbjct: 171 RQNTRYSMSAGAEKVP-TNFCILAMLEQ 197
>gi|341899118|gb|EGT55053.1| hypothetical protein CAEBREN_16999 [Caenorhabditis brenneri]
Length = 320
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 14/132 (10%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLW-CGHTLCKNCILGLQWAVVKFPTLPVQLP 92
V ++ + C IC ++++ +P +L CGH+LC C L L
Sbjct: 171 VKTIEYDDSKFNCKICTQAYDTETRIPLMLRNCGHSLCTACATTL---------LSENKK 221
Query: 93 LFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED-RQPASSSS 151
+I CP+C ++ + +G F KNY +L +E M D V+ D + A +
Sbjct: 222 QYIMCPFCQHVT---LVQGPAWFLPKNYTILEFLEDMPRDVVEQKEDEAVDVMEAAEAIE 278
Query: 152 GSSTFGNQLNRG 163
G N G
Sbjct: 279 AVDAVGADENVG 290
>gi|341902410|gb|EGT58345.1| hypothetical protein CAEBREN_10572 [Caenorhabditis brenneri]
Length = 285
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 42 ESLECPICWESF--NMVENVPYVLW-CGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
++LEC +C++ F + P +L CGH+LC C+ L + ++ CP
Sbjct: 178 KTLECNVCFKRFKGSSKRRTPRILTSCGHSLCHKCLETLSGS-----------QGYVICP 226
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDR 133
C + VV G +K +KNY L ++E ++G +
Sbjct: 227 TC--MKKTVVPVGGVKMLQKNYIALGLLEEIDGKK 259
>gi|189521260|ref|XP_001336650.2| PREDICTED: hypothetical protein LOC100000253 [Danio rerio]
Length = 201
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 27 SECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT 86
SE + V +ECP+C++ ++ +P +L C H C C+ +Q + P
Sbjct: 2 SETQSTSAQTEVPESPEVECPVCYQEYDQHSKLPRMLECLHVFCTECLRKIQLTPLHPPD 61
Query: 87 LPVQLPLFISCPWCN 101
P P ISCP C
Sbjct: 62 -PDSAP-SISCPLCR 74
>gi|341893499|gb|EGT49434.1| hypothetical protein CAEBREN_03410 [Caenorhabditis brenneri]
Length = 594
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAV 81
ESLECP+C+ ++ EN+P +L CGH+ C +C+ L A
Sbjct: 500 ESLECPVCYRTY---ENMPRMLQCGHSFCNSCLNRLHNAT 536
>gi|432887980|ref|XP_004075007.1| PREDICTED: RING finger and CCCH-type zinc finger domain-containing
protein 2-like [Oryzias latipes]
Length = 1137
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L CPIC+ F+ + P L C HT+CK C+ L F P+ + + C
Sbjct: 10 EFLSCPICYNEFDSSSHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTDIDLLPVNCA 69
Query: 102 LLSF 105
LL
Sbjct: 70 LLQL 73
>gi|297480908|ref|XP_002691729.1| PREDICTED: RING finger protein 208 [Bos taurus]
gi|358421556|ref|XP_003585015.1| PREDICTED: RING finger protein 208 [Bos taurus]
gi|296482008|tpg|DAA24123.1| TPA: ring finger protein 208-like [Bos taurus]
Length = 266
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N + P VL C H++C+ C+ L + K+ FISCP C
Sbjct: 144 EPLECPTCGHTYNATQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCR 195
>gi|327286392|ref|XP_003227914.1| PREDICTED: e3 ubiquitin-protein ligase TRIM32-like [Anolis
carolinensis]
Length = 650
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECPIC E F P +L CGHT+CK C L + I CP+C+
Sbjct: 14 EVLECPICMECFTEEHLRPKLLHCGHTICKQCSEKLLANSIN----------GIRCPFCS 63
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVES 128
+V NL N +L ++++
Sbjct: 64 ----KVTRITNLAQLNDNLTVLKIIDT 86
>gi|302679880|ref|XP_003029622.1| hypothetical protein SCHCODRAFT_236416 [Schizophyllum commune
H4-8]
gi|300103312|gb|EFI94719.1| hypothetical protein SCHCODRAFT_236416 [Schizophyllum commune
H4-8]
Length = 415
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
+ ECPIC+ESF ++E+ + + CGH +C C QW
Sbjct: 3 TAECPICFESFALLEDGVFFVACGHCICTECSRQRQW 39
>gi|156357582|ref|XP_001624295.1| predicted protein [Nematostella vectensis]
gi|156211063|gb|EDO32195.1| predicted protein [Nematostella vectensis]
Length = 537
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
++ + CPIC+E F + +P C H +C+ C+LG+ QL F CP C
Sbjct: 20 QDEISCPICYEDFEEPKCLPK---CAHNICRECLLGI--------IEKAQLERF-ECPIC 67
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKS 136
+ V G FP N L+ +VE+ G + K
Sbjct: 68 RAI-VAVPKDGIDGFP-TNSLLVRLVENAPGRKEKQ 101
>gi|341895875|gb|EGT51810.1| hypothetical protein CAEBREN_20500 [Caenorhabditis brenneri]
Length = 314
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 43 SLECPICWESF-NMVENV-PYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
SLEC +C + + N VE++ P +L CGHT+C+ C + ++CP+
Sbjct: 3 SLECKVCLQEYSNQVEDLTPRMLTCGHTICEKCAEQILDGEE------------VACPFD 50
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
++ V G +K KNY LL ++E V +D +P S SS
Sbjct: 51 RKITN--VDGGEIKSLSKNYTLLEILEERQSVEVS------DDERPDELSVDSS 96
>gi|308485130|ref|XP_003104764.1| hypothetical protein CRE_23992 [Caenorhabditis remanei]
gi|308257462|gb|EFP01415.1| hypothetical protein CRE_23992 [Caenorhabditis remanei]
Length = 1650
Score = 44.3 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
VS + EE C +C+ F+ VP +L CGH+LC++CI L
Sbjct: 12 VSPSEAAEEKPSCMVCYNDFHSKSRVPKILPCGHSLCQDCITTL 55
Score = 43.5 bits (101), Expect = 0.097, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
C IC++SFN + P V CGHT C +C+ GL
Sbjct: 896 FSCVICYDSFNTGKRTPKVFPCGHTFCLSCVKGL 929
>gi|341876719|gb|EGT32654.1| hypothetical protein CAEBREN_00266 [Caenorhabditis brenneri]
Length = 771
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 17/88 (19%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFIS-----CPWC 100
C IC++ FN + +P V CGHT C +C+ GL F+S CP C
Sbjct: 148 CMICYDPFNTEKRIPKVFPCGHTFCLSCVQGLMKNRT-----------FMSSSTVYCPTC 196
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVES 128
+ + G K P N+ +L M+E
Sbjct: 197 RQNTRYSMSAGAEKVP-TNFCILAMLEQ 223
>gi|32564312|ref|NP_494243.2| Protein ZK1240.1 [Caenorhabditis elegans]
gi|351065649|emb|CCD61643.1| Protein ZK1240.1 [Caenorhabditis elegans]
Length = 310
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 18/97 (18%)
Query: 44 LECPICWESFNMV--ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+EC IC F+ V + VP +L CGH++C+ C L ISCP+C
Sbjct: 5 IECEICNLEFSSVNEDQVPRILKCGHSVCQCCATKLLKNSA------------ISCPFCR 52
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
+K +KN+ LL ++E +RV+
Sbjct: 53 ----ETTSVSAVKDLQKNFALLQIIEHTKTERVEEED 85
>gi|308486581|ref|XP_003105487.1| hypothetical protein CRE_22483 [Caenorhabditis remanei]
gi|308255453|gb|EFO99405.1| hypothetical protein CRE_22483 [Caenorhabditis remanei]
Length = 194
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
C IC + FN EN+P L CGHT+C C+ L + + CP+C
Sbjct: 132 CEICTDEFNEDENLPKALGCGHTVCAKCLKNLNEYNDR----------IVMCPFC 176
>gi|326930176|ref|XP_003211227.1| PREDICTED: hypothetical protein LOC100547901 [Meleagris gallopavo]
Length = 257
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 31 DDDVSSVVSR-EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
DD S SR + LEC IC+ S+++ +P L+CGHT C+ C+ L +
Sbjct: 106 DDGRSGCRSRGSQKLECIICYSSYDLCGRLPRRLYCGHTFCQACLKRLDAVANEQ----- 160
Query: 90 QLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLL 123
+I CP C + N PR +L
Sbjct: 161 ---RWIPCPQC---------RQNTPTPRGGVTML 182
>gi|26330171|dbj|BAC25078.1| unnamed protein product [Mus musculus]
Length = 128
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C ++N+ + P VL C H++C+ C+ L + K+ FISCP C+
Sbjct: 6 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKY--------KFISCPTCH 57
>gi|242215070|ref|XP_002473353.1| predicted protein [Postia placenta Mad-698-R]
gi|220727521|gb|EED81437.1| predicted protein [Postia placenta Mad-698-R]
Length = 542
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
EC IC E FN V+ V + CGH C+ CILG A + P I CP C
Sbjct: 351 FECGICLEEFN-VDVVARIDICGHQFCRTCILGHTAAKIDERRYP------IVCPIC--- 400
Query: 104 SFRVVYKGNLKFPRKNY 120
+ KG K K Y
Sbjct: 401 ---MADKGLKKQGDKQY 414
>gi|348513879|ref|XP_003444468.1| PREDICTED: RING finger and CCCH-type zinc finger domain-containing
protein 2-like [Oreochromis niloticus]
Length = 1126
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L CPIC+ F+ + P L C HT+CK C+ L F P+ + + C
Sbjct: 10 EFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTDIDLLPVNCA 69
Query: 102 LLSF 105
LL
Sbjct: 70 LLQL 73
>gi|308505592|ref|XP_003114979.1| hypothetical protein CRE_28042 [Caenorhabditis remanei]
gi|308259161|gb|EFP03114.1| hypothetical protein CRE_28042 [Caenorhabditis remanei]
Length = 735
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
C IC E + EN P V CGHT+C CI L+ Q P I+CP C
Sbjct: 290 CQICQEEYGD-ENHPVVTECGHTMCDKCIQNLKNQ---------QGPTTINCPTC 334
>gi|341876709|gb|EGT32644.1| hypothetical protein CAEBREN_29370 [Caenorhabditis brenneri]
Length = 1515
Score = 43.9 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 31 DDDVSSVVSREESLE------CPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
DD+V+ + E+ + C +C+ +F+ VP +L CGH+ C+ CI+GL
Sbjct: 770 DDEVTVIQPVEKDADADSKPVCMVCYNAFHSKTRVPKILPCGHSFCQECIVGL 822
>gi|341876693|gb|EGT32628.1| hypothetical protein CAEBREN_31129 [Caenorhabditis brenneri]
Length = 456
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 22/101 (21%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL-- 103
CP+C ++++ P + CGHT C C L L +P Q + CP C
Sbjct: 16 CPVCRDTYHPTRRCPIGVPCGHTFCSQCALTL---------IPAQSTPVVICPVCRKRHV 66
Query: 104 ---SFRVVYKGNLKFPRKNYFLLWMVESMNG-----DRVKS 136
S GN K KN+ LL ++E DR KS
Sbjct: 67 GQSSPGETIPGNFK---KNFSLLEVLEKFTETKQKLDRAKS 104
>gi|242223643|ref|XP_002477417.1| predicted protein [Postia placenta Mad-698-R]
gi|220723024|gb|EED77385.1| predicted protein [Postia placenta Mad-698-R]
Length = 385
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFIS 96
EC IC E FN V+ V + CGH C+ CILG A + P+ P+ ++
Sbjct: 194 FECGICLEEFN-VDVVARIDICGHQFCRTCILGHTAAKIDERRYPIVCPICMA 245
>gi|344290478|ref|XP_003416965.1| PREDICTED: RING finger protein 222-like [Loxodonta africana]
Length = 220
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGHT C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHTFCHDCLVKYLLST----QVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|405957745|gb|EKC23932.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 631
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
CPIC+ESF P +L C HT C NC+ + K PV P CP C
Sbjct: 19 CPICFESFK----TPKILPCMHTFCHNCLSSYILSTCKTKESPVGFP----CPLC 65
>gi|213515404|ref|NP_001134456.1| RING finger protein 182 [Salmo salar]
gi|209733468|gb|ACI67603.1| RING finger protein 182 [Salmo salar]
Length = 173
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 59/152 (38%), Gaps = 27/152 (17%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL-QWAVVKFPTLPVQLPL--FISCPWC 100
LEC IC+ S+N P L C H+ C+ C++ L Q +V + + P I CP C
Sbjct: 5 LECGICYRSYNTGRRCPRELQCKHSFCERCLVTLSQSSVCEVESTKECSPQDKTIVCPLC 64
Query: 101 NLLS-----FRVVYKGNLKFPRKNYFLLWMVESMNGDRVKS----------HSGFCEDRQ 145
+ R + + + + ESM D S H E+R
Sbjct: 65 RYPTPVSGKVRAALRVDESVLERMVVSGVLDESMTDDEEDSEGKEDDNETPHENSAEERD 124
Query: 146 PASSSSGSSTFGNQLNR------GNH--RRGQ 169
+S S G F L+R GNH RR Q
Sbjct: 125 SSSGSRGGR-FRRSLSRVWGKFTGNHSQRRAQ 155
>gi|324511099|gb|ADY44631.1| E3 ubiquitin-protein ligase TRIM13 [Ascaris suum]
Length = 386
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 16/69 (23%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ----------L 91
E++ECP+C + F P L CGH+LC +C+ L + P PV+
Sbjct: 15 EAMECPVCTQIFEQ----PRQLHCGHSLCAHCVERLVELRRQMP--PVRGLGGIATSSSY 68
Query: 92 PLFISCPWC 100
P+ ISCP C
Sbjct: 69 PVTISCPVC 77
>gi|145478817|ref|XP_001425431.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392501|emb|CAK58033.1| unnamed protein product [Paramecium tetraurelia]
Length = 497
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E L CP C FN EN P +L CGHT+C+ CI + L ISCP
Sbjct: 2 EELICPQCHNIFNEFENTPLMLPDCGHTICQQCIQFM---------LSNSDGQQISCPED 52
Query: 101 NLLSFRVVYKGNL---KFPRKNYFLLWMV 126
N+L+ +G L +FP KN LL M+
Sbjct: 53 NILA-----RGKLNISEFP-KNCQLLKMI 75
>gi|85687488|gb|ABC73694.1| TRAF6 [Azumapecten farreri]
Length = 655
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
D SV+ RE+ +CPIC +V PY CGH C+NCI P PV
Sbjct: 80 DFESVLPREDKYDCPICL----LVLRDPYQTECGHRFCQNCIKRWLRETESEPRCPV 132
>gi|341882041|gb|EGT37976.1| hypothetical protein CAEBREN_18583 [Caenorhabditis brenneri]
Length = 675
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 5 ASTCLAGNVGLKN----DSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60
A++ A N L + D L+ S + + D + +S C +C++ ++ N
Sbjct: 15 ANSSDAANAKLPDVEFGDRLEESSKTEKTAGDIIRETADNVQS--CRVCYDEYHTSRNQA 72
Query: 61 YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
VL CGHT C C++ + K ++P I CP C +S
Sbjct: 73 RVLGCGHTFCTRCVIS--CSTPKGQSVPQ---TGIKCPECRKIS 111
>gi|390340193|ref|XP_003725189.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 346
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 12/60 (20%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
ESL CP+C ++F VP +L+CGHT CK C+ K+ T + F+ CP C
Sbjct: 11 ESLACPLCLDAFK----VPTLLFCGHTFCKVCL-------DKYDT-HYRGQDFMECPVCK 58
>gi|341876660|gb|EGT32595.1| hypothetical protein CAEBREN_19523 [Caenorhabditis brenneri]
Length = 485
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 22/101 (21%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL-- 103
CP+C ++++ P + CGHT C C L L +P Q + CP C
Sbjct: 16 CPVCRDTYHPTRRCPIGVPCGHTFCSQCALTL---------IPAQSTPVVICPVCRKRHV 66
Query: 104 ---SFRVVYKGNLKFPRKNYFLLWMVESMNG-----DRVKS 136
S GN K KN+ LL ++E DR KS
Sbjct: 67 GQSSPGETIPGNFK---KNFSLLEVLEKFTETKQKLDRAKS 104
>gi|260786266|ref|XP_002588179.1| hypothetical protein BRAFLDRAFT_68819 [Branchiostoma floridae]
gi|229273338|gb|EEN44190.1| hypothetical protein BRAFLDRAFT_68819 [Branchiostoma floridae]
Length = 1290
Score = 43.5 bits (101), Expect = 0.089, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC+ FN + P L CGHT+C+ C+
Sbjct: 12 LSCPICYNEFNENQRKPISLGCGHTVCQTCL 42
>gi|268560964|ref|XP_002646332.1| Hypothetical protein CBG12045 [Caenorhabditis briggsae]
Length = 840
Score = 43.5 bits (101), Expect = 0.090, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 14 GLKNDSLKASEAASE--CSDDDVSSVVSRE----ESLECPICWESFNMVENVPYVLWCGH 67
G +D+ +++ SE +D + ++++ + + C IC++ FN + +P V CGH
Sbjct: 118 GAASDTGESTNKPSEDNLKEDRIEAILTPKGTEMKGFSCMICYDPFNTGKRIPKVFPCGH 177
Query: 68 TLCKNCILGL 77
T C +C+ GL
Sbjct: 178 TFCLSCVGGL 187
>gi|195374896|ref|XP_002046239.1| GJ12622 [Drosophila virilis]
gi|194153397|gb|EDW68581.1| GJ12622 [Drosophila virilis]
Length = 894
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + VP L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFEASQRVPISLGCGHTICKPCLTTL 45
>gi|308500071|ref|XP_003112221.1| hypothetical protein CRE_29752 [Caenorhabditis remanei]
gi|308268702|gb|EFP12655.1| hypothetical protein CRE_29752 [Caenorhabditis remanei]
Length = 735
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C++ + +N P VL CGHT C C++ P+ + I CP C +S
Sbjct: 60 CHVCYDDYETPKNQPRVLACGHTYCTRCVISCSA-----PSEQHNSSIGIKCPECRKISI 114
Query: 106 RV 107
+
Sbjct: 115 QA 116
>gi|365222888|gb|AEW69796.1| Hop-interacting protein THI033 [Solanum lycopersicum]
Length = 447
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 16/138 (11%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
DD++S V E+ C IC++ ++ V CGH +C +C+L L K P
Sbjct: 309 DDNISEV---NETEICCICFDQVCTIQ----VQDCGHQMCAHCVLAL--CCHKKPNPTTT 359
Query: 91 LPLFISCPWC--NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPAS 148
P+ CP+C N++ V+ K + + +V + + F E
Sbjct: 360 SPIVPVCPFCRSNIVQLDVI-----KLEKDDGTSHDIVSPSKLRKSRRSRNFSEGSSSFK 414
Query: 149 SSSGSSTFGNQLNRGNHR 166
S S+FG + RG+ R
Sbjct: 415 GLSAVSSFGRMVGRGSGR 432
>gi|145484677|ref|XP_001428348.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395433|emb|CAK60950.1| unnamed protein product [Paramecium tetraurelia]
Length = 574
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 19/89 (21%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E L CP C FN EN+P +L CGHT+C+ CI + + I CP
Sbjct: 2 EELICPQCCNIFNEFENIPLMLPDCGHTICQKCIKQMLMSADGQQ---------ICCPED 52
Query: 101 NLLSFRVVYKGN---LKFPRKNYFLLWMV 126
N+L+ KG +FP KN LL MV
Sbjct: 53 NILA-----KGKTHITEFP-KNCQLLKMV 75
>gi|403360670|gb|EJY80017.1| RING domain containing protein [Oxytricha trifallax]
Length = 830
Score = 43.5 bits (101), Expect = 0.097, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E EC IC+ ++ +P +L CGHT C+ C+ +K P+ I+CP C
Sbjct: 2 EKEECSICFFQYDKHHKIPRILRCGHTFCQTCL-----DEIKLPS-----KHSITCPNCR 51
Query: 102 LLSFRVVYKGNL 113
+ + V+ NL
Sbjct: 52 VKTENVICTKNL 63
>gi|341874954|gb|EGT30889.1| hypothetical protein CAEBREN_05351 [Caenorhabditis brenneri]
Length = 120
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 19/126 (15%)
Query: 9 LAGNVGLKNDSLKASEAASECSDDDV----SSVVSREESLECPICWESFNMVENVPYVLW 64
L+ + D + + + E D+ + + +V E LEC +C+ ++ VP VL
Sbjct: 5 LSARIVWGEDDVARNNSFDESDDEQLPNFPTEIVISSEDLECNVCFLPYS-DRRVPLVLT 63
Query: 65 -CGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLL 123
CGH+LCK C Q + FI+CP+C R G+ + KNY ++
Sbjct: 64 KCGHSLCKKCCKASQQQFL--------FSRFINCPFC-----RTRTPGSFEMLPKNYTVM 110
Query: 124 WMVESM 129
+V+ +
Sbjct: 111 RIVQKI 116
>gi|443687451|gb|ELT90423.1| hypothetical protein CAPTEDRAFT_43805, partial [Capitella teleta]
Length = 451
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
E L CPIC SF+ P L C HT CK C+L LQ F P+Q P+
Sbjct: 10 EFLVCPICTHSFDGSALKPISLACSHTFCKACLLKLQHK-CPFDQAPIQRPV 60
>gi|403375465|gb|EJY87704.1| hypothetical protein OXYTRI_00251 [Oxytricha trifallax]
Length = 614
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 44 LECPICWESFNMVENVPYVL-WCGHTLCKNCILG--LQWAVVKFPTLPVQLPLFISCPWC 100
++CP C + ++ N+P +L CGHTLC+ CIL + + + I CP C
Sbjct: 1 MQCPQCIQLYHQETNIPRILIGCGHTLCEKCILSCFANKSQTNY------MKQVIECPEC 54
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMV 126
L+ + FP KN LL M
Sbjct: 55 GTLNEADSVQS---FP-KNLALLNMA 76
>gi|225465817|ref|XP_002263469.1| PREDICTED: E3 ubiquitin-protein ligase KEG [Vitis vinifera]
gi|296087851|emb|CBI35107.3| unnamed protein product [Vitis vinifera]
Length = 1631
Score = 43.5 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N E VP +L CGH CK C+ L F P +SCP C +S
Sbjct: 6 CLVCQTRYNEEERVPLLLQCGHGFCKECLSRL------FSASP---DTNLSCPRCRHVS- 55
Query: 106 RVVYKGNLKFPRKNYFLLWMVES 128
+++ RKNY +L +++S
Sbjct: 56 --SVGNSVQALRKNYGVLALIQS 76
>gi|193575609|ref|XP_001952583.1| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Acyrthosiphon
pisum]
Length = 573
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 34 VSSVVSREESLECPICWESFNMV-ENVPYVLWCGHTLCKNCILGL 77
++S+ + + LEC +C + F + + VP +L+CGHT+C +C+L L
Sbjct: 16 IASIPDKSDVLECRVCEDIFTLQGDKVPRLLYCGHTICHSCLLRL 60
>gi|341882624|gb|EGT38559.1| hypothetical protein CAEBREN_02162 [Caenorhabditis brenneri]
Length = 698
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 30 SDDDVSSVVSREESLE------CPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
DD+V+ + E+ + C +C+ +F+ VP +L CGH+ C+ CI+GL
Sbjct: 2 DDDEVTVIQPVEKDADADSKPVCMVCYNAFHSKTRVPKILPCGHSFCQECIVGL 55
>gi|145477745|ref|XP_001424895.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391962|emb|CAK57497.1| unnamed protein product [Paramecium tetraurelia]
Length = 583
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 19/89 (21%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E L CP C FN EN+P +L CGHT+C+ CI + + I CP
Sbjct: 2 EELICPQCHNIFNEFENIPLMLPDCGHTICQKCIQQMLMSADGQQ---------ICCPED 52
Query: 101 NLLSFRVVYKGN---LKFPRKNYFLLWMV 126
N+L+ KG +FP KN LL MV
Sbjct: 53 NILA-----KGKTHITEFP-KNCQLLKMV 75
>gi|242215415|ref|XP_002473523.1| predicted protein [Postia placenta Mad-698-R]
gi|220727363|gb|EED81284.1| predicted protein [Postia placenta Mad-698-R]
Length = 764
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EC +C E FN V+ V + CGH C+ CILG A + P I CP C
Sbjct: 485 FECGVCLEEFN-VDVVARIDICGHQFCRTCILGHTAAKIDERRYP------IVCPIC 534
>gi|341875587|gb|EGT31522.1| hypothetical protein CAEBREN_01649 [Caenorhabditis brenneri]
Length = 261
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 46 CPICWESFNMVEN-VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
C IC E ++ EN VP L CGHT+C C T ++ P + CP+ +
Sbjct: 193 CEICLEQYSYEENHVPRFLSCGHTVCHGC------------TKRLEAPSGVRCPF-DRQE 239
Query: 105 FRVVYKGNLKFPRKNYFLLWM 125
+V Y + P KNY ++ M
Sbjct: 240 TKVDYAAGEQLP-KNYAVITM 259
>gi|308479985|ref|XP_003102200.1| hypothetical protein CRE_05895 [Caenorhabditis remanei]
gi|308262126|gb|EFP06079.1| hypothetical protein CRE_05895 [Caenorhabditis remanei]
Length = 238
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 20/85 (23%)
Query: 41 EESLECPICWESFNMV--ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
+ EC IC + F + P VL CGHT+C NC+ LQ ++CP
Sbjct: 168 QTRFECEICLQQFTDIAGNRAPKVLRCGHTICANCVNSLQQNNS------------VTCP 215
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLL 123
+C +++ NL NY +L
Sbjct: 216 FCRVVT------SNLAEIYNNYIIL 234
>gi|357133624|ref|XP_003568424.1| PREDICTED: uncharacterized protein LOC100826344 [Brachypodium
distachyon]
Length = 821
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E ECP+C F+ VP VL CGH+LC +CI L P + CP C+
Sbjct: 12 EPPECPVCLSPFDAASVVPRVLPCGHSLCGSCISSLP------PASASAGASSLRCPLCS 65
>gi|195135659|ref|XP_002012250.1| GI16872 [Drosophila mojavensis]
gi|193918514|gb|EDW17381.1| GI16872 [Drosophila mojavensis]
Length = 845
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + VP L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFEASQRVPISLGCGHTICKPCLTTL 45
>gi|25395437|pir||D88072 protein ZK1240.1 [imported] - Caenorhabditis elegans
Length = 412
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 18/97 (18%)
Query: 44 LECPICWESFNMV--ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+EC IC F+ V + VP +L CGH++C+ C L ISCP+C
Sbjct: 38 IECEICNLEFSSVNEDQVPRILKCGHSVCQCCATKLLKNSA------------ISCPFCR 85
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
+K +KN+ LL ++E +RV+
Sbjct: 86 ----ETTSVSAVKDLQKNFALLQIIEHTKTERVEEED 118
>gi|348560945|ref|XP_003466273.1| PREDICTED: RING finger protein 222-like [Cavia porcellus]
Length = 215
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|19112863|ref|NP_596071.1| zf-C3HC4 type zinc finger [Schizosaccharomyces pombe 972h-]
gi|74582553|sp|O74775.1|SIP5_SCHPO RecName: Full=Protein sip5
gi|3738206|emb|CAA21261.1| zf-C3HC4 type zinc finger [Schizosaccharomyces pombe]
Length = 554
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL-----FIS- 96
++ECPIC+ + N Y C +C C + ++ A PT+ P IS
Sbjct: 148 AMECPICFLYY--PSNFNYTRCCAQPICSECFVEIRRAEPHLPTVHANEPTPNEFDLISE 205
Query: 97 ---CPWCNLLSFRVVYKGNLKF 115
CP+C F V+YK N K
Sbjct: 206 PAKCPYCMTERFGVIYKPNPKL 227
>gi|302679882|ref|XP_003029623.1| hypothetical protein SCHCODRAFT_111164 [Schizophyllum commune H4-8]
gi|300103313|gb|EFI94720.1| hypothetical protein SCHCODRAFT_111164, partial [Schizophyllum
commune H4-8]
Length = 926
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 38/127 (29%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
S ECP+C E F E+ + L CGH +C C QW CP C
Sbjct: 4 SAECPVCLEDFRFPEDGVFFLTCGHGICARCSHLQQWT---------------RCPTCRT 48
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNR 162
+F ++ P + F+ ++ H+ +P ++SS ++
Sbjct: 49 YTFASIH------PPQRIFV----------QLALHAAGASVEEPVAASS-------EVEV 85
Query: 163 GNHRRGQ 169
N R GQ
Sbjct: 86 ANRRTGQ 92
>gi|281343200|gb|EFB18784.1| hypothetical protein PANDA_010055 [Ailuropoda melanoleuca]
Length = 95
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPVCRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|405972294|gb|EKC37070.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
Length = 394
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 10/65 (15%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL--------QWAVVKFPTLPVQLPLFI 95
L+C IC E+F+ E +P +L C HT C +C+ + + F ++PV + I
Sbjct: 83 LKCLICRETFDEDEKMPKMLPCHHTFCLDCLKQMFRVEGEFRRNLTSAFRSMPVAVK--I 140
Query: 96 SCPWC 100
SCP C
Sbjct: 141 SCPTC 145
>gi|20386036|gb|AAM21558.1|AF446007_1 MEK1 interacting protein 1 [Dictyostelium discoideum]
Length = 577
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 26/94 (27%)
Query: 9 LAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYV-LWCGH 67
L + +N+S KA + S D + ++LECPIC+E + PYV CGH
Sbjct: 482 LQKEMEKENESKKAIDTQSNGGD-------KKSKNLECPICFE-----DTKPYVSTLCGH 529
Query: 68 TLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
C +CI+ L SCP CN
Sbjct: 530 IFCSDCIVNA-------------LKKKKSCPVCN 550
>gi|308456629|ref|XP_003090741.1| hypothetical protein CRE_03516 [Caenorhabditis remanei]
gi|308260767|gb|EFP04720.1| hypothetical protein CRE_03516 [Caenorhabditis remanei]
Length = 949
Score = 42.7 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNC 73
ESLEC IC +N + +P V+ CGHTLC++C
Sbjct: 257 ESLECKICVRQYNETDRIPRVIPVCGHTLCEDC 289
>gi|403374816|gb|EJY87368.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1850
Score = 42.7 bits (99), Expect = 0.15, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
++C C E +++ N PYVL C HT+CK C+
Sbjct: 1 MQCSNCGEPYDLKNNTPYVLSCNHTVCKQCL 31
>gi|403350962|gb|EJY74961.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1849
Score = 42.7 bits (99), Expect = 0.15, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
++C C E +++ N PYVL C HT+CK C+
Sbjct: 1 MQCSNCGEPYDLKNNTPYVLSCNHTVCKQCL 31
>gi|147836207|emb|CAN73176.1| hypothetical protein VITISV_007720 [Vitis vinifera]
Length = 1662
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N E VP +L CGH CK C+ L F P +SCP C +S
Sbjct: 6 CLVCQTRYNEEERVPLLLQCGHGFCKECLSRL------FSASP---DTNLSCPRCRHVSS 56
Query: 106 RVVYKGNLKFPRKNYFLLWMVES 128
+++ RKNY +L +++S
Sbjct: 57 ---VGNSVQALRKNYGVLALIQS 76
>gi|17543448|ref|NP_502615.1| Protein Y45F10B.8 [Caenorhabditis elegans]
gi|3880972|emb|CAA16351.1| Protein Y45F10B.8 [Caenorhabditis elegans]
Length = 244
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+++ SS+ SR +EC IC+ S++ VP V+ CGHT+C C+
Sbjct: 164 ENEKSSLASR---VECTICYLSYDNEARVPRVMKCGHTICHTCV 204
>gi|402896628|ref|XP_003911393.1| PREDICTED: RING finger protein 183 isoform 2 [Papio anubis]
Length = 215
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 15/125 (12%)
Query: 21 KASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWA 80
+ S A C ++ RE ECPICW FN + P +L C H+ C C+ L
Sbjct: 11 RTSPARPPCVWLRMAEQEGRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHLSLV 70
Query: 81 VVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGF 140
P Q L CP C + + + P L + R++ H
Sbjct: 71 T------PAQRRLL--CPLCRQPTVLALGQPVTDLPTDTAMLTLL-------RLEPHHVI 115
Query: 141 CEDRQ 145
E RQ
Sbjct: 116 LEGRQ 120
>gi|255543935|ref|XP_002513030.1| ankyrin-repeat containing protein, putative [Ricinus communis]
gi|223548041|gb|EEF49533.1| ankyrin-repeat containing protein, putative [Ricinus communis]
Length = 1617
Score = 42.7 bits (99), Expect = 0.15, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N E VP +L CGH CK C+ + L ++CP C +S
Sbjct: 6 CSVCQTRYNEEERVPLLLQCGHGFCKECLSRM---------FSSSLDTTLACPRCRHVS- 55
Query: 106 RVVYKGNLKFPRKNYFLLWMVES 128
V ++ RKNY +L ++ +
Sbjct: 56 --VVGNSVNALRKNYAVLSLLSA 76
>gi|66822495|ref|XP_644602.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|66822589|ref|XP_644649.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|60472704|gb|EAL70654.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
gi|60472772|gb|EAL70722.1| MEK1 interacting protein 1 [Dictyostelium discoideum AX4]
Length = 552
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 26/94 (27%)
Query: 9 LAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYV-LWCGH 67
L + +N+S KA + S D + ++LECPIC+E + PYV CGH
Sbjct: 470 LQKEMEKENESKKAIDTQSNGGD-------KKSKNLECPICFE-----DTKPYVSTLCGH 517
Query: 68 TLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
C +CI+ L SCP CN
Sbjct: 518 IFCSDCIVNA-------------LKKKKSCPVCN 538
>gi|432912144|ref|XP_004078849.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Oryzias
latipes]
Length = 264
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
S+D S+ + E +EC IC+ +N+ P VL C H LC C++ ++ LP
Sbjct: 8 SEDGNSAFIQSAEEMECKICYCMYNLGSRRPKVLECCHRLCSKCLI----KILDLGELP- 62
Query: 90 QLPLFISCPWCNLLS 104
P + CP+C ++
Sbjct: 63 --PNALVCPFCRCIT 75
>gi|426342715|ref|XP_004037980.1| PREDICTED: tripartite motif-containing protein 59 isoform 2
[Gorilla gorilla gorilla]
Length = 431
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 33 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 86
Query: 100 CNLLS 104
C ++
Sbjct: 87 CRSIT 91
>gi|348542888|ref|XP_003458916.1| PREDICTED: RING finger protein 222-like [Oreochromis niloticus]
Length = 170
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL----FISC 97
E LEC +C++++N P L C H+ C++C+L L P P + L I C
Sbjct: 4 EELECGVCYQTYNAGRRCPRELQCKHSFCESCLLALSR-----PLGPGEAHLEAGRLIVC 58
Query: 98 PWCN 101
P C
Sbjct: 59 PLCR 62
>gi|449280515|gb|EMC87803.1| RING finger protein 222 [Columba livia]
Length = 238
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 34 VSSVVSREESL--ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
+S S +E L ECP+C+E F+ +E + L CGH C +C++ + L Q+
Sbjct: 18 MSETSSSKEGLPAECPVCYEKFHPLEAMRRQLSCGHIFCHDCLVKCLLSA----KLDGQV 73
Query: 92 PLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVE 127
I CP C ++F + K +P K W +E
Sbjct: 74 QSSIICPICRYVTF--LSKKKALWPPKARTNSWTLE 107
>gi|17543450|ref|NP_502624.1| Protein Y45F10B.9 [Caenorhabditis elegans]
gi|3880971|emb|CAA16350.1| Protein Y45F10B.9 [Caenorhabditis elegans]
Length = 244
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+++ SS+ SR +EC IC+ S++ VP V+ CGHT+C C+
Sbjct: 164 ENEKSSLASR---VECTICYLSYDNEARVPRVMKCGHTICHTCV 204
>gi|405957742|gb|EKC23929.1| Midline-2 [Crassostrea gigas]
Length = 630
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E + CPIC+ESF P +L C HT C NC+ + K PV P CP C
Sbjct: 14 EITTTCPICFESFK----TPRILPCLHTFCHNCLSSYILSTCKSKESPVGFP----CPLC 65
>gi|358058500|dbj|GAA95463.1| hypothetical protein E5Q_02117 [Mixia osmundae IAM 14324]
Length = 231
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
L CP+C+E+F + V L CGHTLC+ C+ QW V P + + CP C
Sbjct: 134 LSCPLCYETFGRRQVV--TLACGHTLCQTCL--EQWVVRSSTVDPDR--IVPECPECR 185
>gi|405978708|gb|EKC43077.1| Tripartite motif-containing protein 45 [Crassostrea gigas]
Length = 660
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
CPIC+ESF P +L C HT C NC+ + K PV P CP C
Sbjct: 19 CPICFESFK----TPRILPCLHTFCHNCLSSYILSTCKTKESPVGFP----CPLC 65
>gi|57043644|ref|XP_544360.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Canis lupus
familiaris]
Length = 574
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + H G C + A SG S
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ----NGHIGQCGAAEEAIGISGES 123
>gi|291411490|ref|XP_002722012.1| PREDICTED: tripartite motif protein 50A [Oryctolagus cuniculus]
Length = 487
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK+C+L L
Sbjct: 11 EDRLQCPICLEVFRE----PLMLQCGHSYCKDCLLAL 43
>gi|157818943|ref|NP_001102298.1| RING finger protein 222 [Rattus norvegicus]
gi|149053001|gb|EDM04818.1| rCG35065 [Rattus norvegicus]
Length = 211
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|363540104|ref|YP_004894646.1| mg595 gene product [Megavirus chiliensis]
gi|350611269|gb|AEQ32713.1| putative ring finger protein [Megavirus chiliensis]
Length = 670
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 16/62 (25%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPW 99
E ++CPIC+ S N+V++ L CGHT+C +CIL + LP CP
Sbjct: 486 NETLVDCPICYGSENLVQSK---LICGHTICLDCILNI-------------LPNSKKCPV 529
Query: 100 CN 101
CN
Sbjct: 530 CN 531
>gi|354469604|ref|XP_003497217.1| PREDICTED: RING finger protein 222-like [Cricetulus griseus]
gi|344237759|gb|EGV93862.1| RING finger protein 222 [Cricetulus griseus]
Length = 212
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|195011991|ref|XP_001983420.1| GH15595 [Drosophila grimshawi]
gi|193896902|gb|EDV95768.1| GH15595 [Drosophila grimshawi]
Length = 916
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F+ + VP L CGHT+C+ C+ L
Sbjct: 12 LNCPICCNEFDGSQRVPISLGCGHTICRPCLTTL 45
>gi|71994539|ref|NP_491164.2| Protein Y47G6A.14 [Caenorhabditis elegans]
gi|373220159|emb|CCD72559.1| Protein Y47G6A.14 [Caenorhabditis elegans]
Length = 468
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
EE CP+C E F+ + P+++ CGH+LC+ CI+ L+
Sbjct: 5 EELPTCPVCQEEFDD-QKAPFIISCGHSLCETCIVHLK 41
>gi|308485310|ref|XP_003104854.1| hypothetical protein CRE_23993 [Caenorhabditis remanei]
gi|308257552|gb|EFP01505.1| hypothetical protein CRE_23993 [Caenorhabditis remanei]
Length = 294
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
+ C IC F+ P VL CGHT+C+ C L+ A P+L V+ CP C
Sbjct: 13 ITCLICIREFDTKTRKPKVLHCGHTVCEECSENLKDA--NSPSLSVR------CPTCRQF 64
Query: 104 SFRVVYKG-NLKFPRKNYFLLWMVESMNGDRVKSHSG 139
+ R+ + N F + ++ E +R ++ G
Sbjct: 65 TQRMQSQTCNTNF----QLMGYLAEKEKMERERTAKG 97
>gi|147818386|emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
Length = 1249
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
++V + R E+ ECPIC ES + P + C H +C+ C+L W P+
Sbjct: 998 EEVVGGIRRGENTECPICLESA----DDPVLTPCAHLMCRECLLS-SWRTPLSGLCPICR 1052
Query: 92 PL-----FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
L I+CP N FR+ + N K K LL +E ++ R+ S
Sbjct: 1053 KLLKKTDLITCPSEN--RFRIDVEKNWKESSKISELLHCLERISQSRIGEKS 1102
>gi|426356607|ref|XP_004045651.1| PREDICTED: tripartite motif-containing protein 73-like [Gorilla
gorilla gorilla]
Length = 250
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 31/120 (25%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ E+ L+CPIC E F P +L CGH+ CK C+ L + L +
Sbjct: 6 SLLELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLGSLSY----------HLDTKL 51
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
CP C ++VV G+ P N L W++E++ GD +V H S FCE Q
Sbjct: 52 RCPMC----WQVV-DGSSSPP--NVSLAWVIEALRLPGDLEPKVCVHHRNPLSLFCEKDQ 104
>gi|355746928|gb|EHH51542.1| hypothetical protein EGM_10939 [Macaca fascicularis]
Length = 403
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|225432997|ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Vitis vinifera]
Length = 1224
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
++V + R E+ ECPIC ES + P + C H +C+ C+L W P+
Sbjct: 973 EEVVGGIRRGENTECPICLESA----DDPVLTPCAHLMCRECLLS-SWRTPLSGLCPICR 1027
Query: 92 PL-----FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
L I+CP N FR+ + N K K LL +E ++ R+ S
Sbjct: 1028 KLLKKTDLITCPSEN--RFRIDVEKNWKESSKISELLHCLERISQSRIGEKS 1077
>gi|426342713|ref|XP_004037979.1| PREDICTED: tripartite motif-containing protein 59 isoform 1
[Gorilla gorilla gorilla]
gi|426342717|ref|XP_004037981.1| PREDICTED: tripartite motif-containing protein 59 isoform 3
[Gorilla gorilla gorilla]
gi|426342719|ref|XP_004037982.1| PREDICTED: tripartite motif-containing protein 59 isoform 4
[Gorilla gorilla gorilla]
gi|426342721|ref|XP_004037983.1| PREDICTED: tripartite motif-containing protein 59 isoform 5
[Gorilla gorilla gorilla]
gi|426342723|ref|XP_004037984.1| PREDICTED: tripartite motif-containing protein 59 isoform 6
[Gorilla gorilla gorilla]
gi|426342725|ref|XP_004037985.1| PREDICTED: tripartite motif-containing protein 59 isoform 7
[Gorilla gorilla gorilla]
Length = 403
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CNLLS 104
C ++
Sbjct: 59 CRSIT 63
>gi|198451974|ref|XP_002137407.1| GA26569 [Drosophila pseudoobscura pseudoobscura]
gi|198131731|gb|EDY67965.1| GA26569 [Drosophila pseudoobscura pseudoobscura]
Length = 209
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
EE+ CPICWES + + P CGH C+ CI + A+ +F P+
Sbjct: 151 EETYNCPICWESVSNRD--PVATKCGHIFCRQCI---RTAIRRFHKCPL 194
>gi|242056063|ref|XP_002457177.1| hypothetical protein SORBIDRAFT_03g002770 [Sorghum bicolor]
gi|241929152|gb|EES02297.1| hypothetical protein SORBIDRAFT_03g002770 [Sorghum bicolor]
Length = 823
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 37 VVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
V + E+ ECP+C F+ VP VL CGH+LC CI
Sbjct: 8 VDAEAETPECPVCLSPFDAASVVPRVLPCGHSLCGPCI 45
>gi|27436877|ref|NP_775107.1| tripartite motif-containing protein 59 [Homo sapiens]
gi|74714421|sp|Q8IWR1.1|TRI59_HUMAN RecName: Full=Tripartite motif-containing protein 59; AltName:
Full=RING finger protein 104; AltName: Full=Tumor
suppressor TSBF-1
gi|27358012|gb|AAN86853.1| tumor suppressor TSBF1 [Homo sapiens]
gi|80475903|gb|AAI09260.1| Tripartite motif-containing 59 [Homo sapiens]
gi|80478299|gb|AAI09261.1| Tripartite motif-containing 59 [Homo sapiens]
gi|119599041|gb|EAW78635.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599042|gb|EAW78636.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599043|gb|EAW78637.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|119599044|gb|EAW78638.1| tripartite motif-containing 59, isoform CRA_a [Homo sapiens]
gi|158256004|dbj|BAF83973.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CNLLS 104
C ++
Sbjct: 59 CRSIT 63
>gi|297286509|ref|XP_001093190.2| PREDICTED: tripartite motif-containing protein 59-like [Macaca
mulatta]
Length = 588
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 190 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 243
Query: 100 CN 101
C
Sbjct: 244 CR 245
>gi|402861071|ref|XP_003894931.1| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Papio
anubis]
gi|383417701|gb|AFH32064.1| tripartite motif-containing protein 59 [Macaca mulatta]
gi|383417703|gb|AFH32065.1| tripartite motif-containing protein 59 [Macaca mulatta]
gi|383417705|gb|AFH32066.1| tripartite motif-containing protein 59 [Macaca mulatta]
Length = 403
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|301764459|ref|XP_002917648.1| PREDICTED: RING finger protein 182-like [Ailuropoda melanoleuca]
gi|300681096|sp|D2H788.1|RN182_AILME RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|281345350|gb|EFB20934.1| hypothetical protein PANDA_005987 [Ailuropoda melanoleuca]
Length = 247
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ D+ + VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQSPDEAAEAQVSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWCN 101
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFCR 68
>gi|31874062|emb|CAD97947.1| hypothetical protein [Homo sapiens]
Length = 323
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFE----DPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CNLLS 104
C ++
Sbjct: 59 CRSIT 63
>gi|402861075|ref|XP_003894933.1| PREDICTED: tripartite motif-containing protein 59 isoform 3 [Papio
anubis]
Length = 588
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 190 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 243
Query: 100 CN 101
C
Sbjct: 244 CR 245
>gi|355559905|gb|EHH16633.1| hypothetical protein EGK_11948 [Macaca mulatta]
gi|380811990|gb|AFE77870.1| tripartite motif-containing protein 59 [Macaca mulatta]
Length = 402
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|308459480|ref|XP_003092059.1| hypothetical protein CRE_24266 [Caenorhabditis remanei]
gi|308254391|gb|EFO98343.1| hypothetical protein CRE_24266 [Caenorhabditis remanei]
Length = 1171
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNC 73
ESLEC IC +N + +P V+ CGHTLC++C
Sbjct: 104 ESLECKICVRQYNDTDRIPRVIPVCGHTLCEDC 136
>gi|308456636|ref|XP_003090744.1| hypothetical protein CRE_03515 [Caenorhabditis remanei]
gi|308260770|gb|EFP04723.1| hypothetical protein CRE_03515 [Caenorhabditis remanei]
Length = 1288
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNC 73
ESLEC IC +N + +P V+ CGHTLC++C
Sbjct: 104 ESLECKICVRQYNDTDRIPRVIPVCGHTLCEDC 136
>gi|291395567|ref|XP_002714227.1| PREDICTED: ring finger protein 182 [Oryctolagus cuniculus]
Length = 247
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDTAESQVSDE--LECKICYNRYNLKQRKPKVLGCCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|218194432|gb|EEC76859.1| hypothetical protein OsI_15041 [Oryza sativa Indica Group]
Length = 1138
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 14 GLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNC 73
G++ DS + S S+ ++V + + + ECPIC ES + P + C H +C+ C
Sbjct: 870 GVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLES---ASDDPVLTPCAHRMCREC 926
Query: 74 IL 75
+L
Sbjct: 927 LL 928
>gi|125589589|gb|EAZ29939.1| hypothetical protein OsJ_13993 [Oryza sativa Japonica Group]
Length = 1132
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 14 GLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNC 73
G++ DS + S S+ ++V + + + ECPIC ES + P + C H +C+ C
Sbjct: 864 GVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLES---ASDDPVLTPCAHRMCREC 920
Query: 74 IL 75
+L
Sbjct: 921 LL 922
>gi|58531994|emb|CAE04094.3| OSJNBa0096F01.3 [Oryza sativa Japonica Group]
Length = 1132
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 14 GLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNC 73
G++ DS + S S+ ++V + + + ECPIC ES + P + C H +C+ C
Sbjct: 864 GVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLES---ASDDPVLTPCAHRMCREC 920
Query: 74 IL 75
+L
Sbjct: 921 LL 922
>gi|405958381|gb|EKC24514.1| B-box type zinc finger protein ncl-1 [Crassostrea gigas]
Length = 1216
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query: 16 KNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCIL 75
++D++ + AS SD ++ + + + C IC E++ +P VL C HT C+ C+
Sbjct: 8 QSDTVTTASTASNSSDSEMEN--ANGPNTRCSICQETYT----IPKVLSCFHTFCQPCLE 61
Query: 76 GLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVK 135
LQ K ISCP C+ +F P +Y + ++E+ D
Sbjct: 62 KLQEVADK-----------ISCPECHQDTFLGGQGLTGLLP--DYAVSNLLETNALDTSA 108
Query: 136 SHSGFCEDRQ 145
H C+ ++
Sbjct: 109 LHCTGCKSKE 118
>gi|410958471|ref|XP_003985841.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Felis catus]
Length = 247
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDGADSQVSDE--LECKICYHRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWCN 101
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFCR 68
>gi|440898577|gb|ELR50042.1| Intraflagellar transport protein 80-like protein [Bos grunniens
mutus]
Length = 948
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|21707222|gb|AAH33871.1| TRIM74 protein [Homo sapiens]
gi|123979822|gb|ABM81740.1| tripartite motif-containing 74 [synthetic construct]
gi|123994589|gb|ABM84896.1| tripartite motif-containing 74 [synthetic construct]
Length = 249
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 31/120 (25%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ E+ L+CPIC E F +L CGH+ CK C++ L + L +
Sbjct: 6 SLLELEDRLQCPICLEVFKE----SLMLQCGHSYCKGCLVSLSY----------HLDTKV 51
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
CP C ++VV G+ P N L W++E++ GD +V H S FCE Q
Sbjct: 52 RCPMC----WQVV-DGSSSLP--NVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQ 104
>gi|65285121|ref|NP_944606.2| tripartite motif-containing protein 73 [Homo sapiens]
gi|56404880|sp|Q86UV7.1|TRI73_HUMAN RecName: Full=Tripartite motif-containing protein 73; AltName:
Full=Tripartite motif-containing protein 50B
gi|30315005|gb|AAP30735.1| tripartite motif protein TRIM50B [Homo sapiens]
gi|157170278|gb|AAI52801.1| Tripartite motif-containing 73 [synthetic construct]
gi|162317766|gb|AAI56767.1| Tripartite motif-containing 73 [synthetic construct]
gi|261860870|dbj|BAI46957.1| tripartite motif-containing protein 73 [synthetic construct]
Length = 250
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 31/120 (25%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ E+ L+CPIC E F +L CGH+ CK C++ L + L +
Sbjct: 6 SLLELEDRLQCPICLEVFKE----SLMLQCGHSYCKGCLVSLSY----------HLDTKV 51
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
CP C ++VV G+ P N L W++E++ GD +V H S FCE Q
Sbjct: 52 RCPMC----WQVV-DGSSSLP--NVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQ 104
>gi|405978710|gb|EKC43079.1| Tripartite motif-containing protein 59 [Crassostrea gigas]
Length = 522
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
+ EE+ CPIC+ESF P L C HT C +C+ + K PV P CP
Sbjct: 29 TTEETTTCPICFESF----LTPRYLPCSHTFCHSCLSSYILSTGKTKDCPVGFP----CP 80
Query: 99 WC 100
C
Sbjct: 81 LC 82
>gi|332818244|ref|XP_003310122.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Pan troglodytes]
Length = 402
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CNLLS 104
C ++
Sbjct: 59 CRSIT 63
>gi|432931345|ref|XP_004081666.1| PREDICTED: RING finger protein 17-like [Oryzias latipes]
Length = 1490
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 42/117 (35%), Gaps = 35/117 (29%)
Query: 46 CPICWESFNMVEN-----VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
C +C E F + EN +P +L CGH C NC+L +Q V I CP C
Sbjct: 12 CKLCKERFKLPENEDEGNLPRILACGHIYCTNCLLSIQSDNV------------IRCPGC 59
Query: 101 NLLS----------------FRVVY--KGNLKFPRKNYFLLWMVESMNGDRVKSHSG 139
S V+Y K N + RKN M D + +G
Sbjct: 60 QEESTLPAGGVFGLQEESSIIGVIYTAKINESYRRKNKLQESQENKMKEDETEKQAG 116
>gi|444731367|gb|ELW71721.1| E3 ubiquitin-protein ligase RNF182 [Tupaia chinensis]
Length = 247
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDPAESQVSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|13879442|gb|AAH06700.1| Tripartite motif-containing 59 [Mus musculus]
gi|19343567|gb|AAH25430.1| Tripartite motif-containing 59 [Mus musculus]
Length = 403
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|358417349|ref|XP_003583618.1| PREDICTED: uncharacterized protein LOC100138708 [Bos taurus]
Length = 256
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVL------WCGHTLCKNCILGLQ------WAV 81
+ S+ R E L+C IC+ FN+ + P L CGHTLC C+ L AV
Sbjct: 80 IPSLPERGE-LDCNICYRPFNLGDRAPRRLPGTARARCGHTLCTACLRELAARGDGGGAV 138
Query: 82 VKFPTLPVQLPLFISCPWCN 101
+ V+L I+CP+C
Sbjct: 139 ARA----VRLRRLITCPFCR 154
>gi|308478449|ref|XP_003101436.1| hypothetical protein CRE_13445 [Caenorhabditis remanei]
gi|308263337|gb|EFP07290.1| hypothetical protein CRE_13445 [Caenorhabditis remanei]
Length = 323
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 10 AGNVGLKND--SLKASEAASECSDDDVSSVVSREESLECPICWESFN--MVENVPYVLW- 64
G VG + S + D+ S + E EC IC ++ + ++ P +L
Sbjct: 212 TGEVGTMRELRSFDGDGVSYTSVDETGESALMSETGAECEICLMKYDGAVEKHTPRILIK 271
Query: 65 CGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLW 124
CGHT+C+ CI L L + CP+C ++ VV G++ + KNY +L
Sbjct: 272 CGHTMCQGCIGNL---------LEYNSHQEVCCPFCQQVT--VVNGGSVSYLPKNYGMLK 320
Query: 125 MVE 127
++
Sbjct: 321 LIR 323
>gi|397521162|ref|XP_003830670.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Pan paniscus]
Length = 402
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CNLLS 104
C ++
Sbjct: 59 CRSIT 63
>gi|296083594|emb|CBI23583.3| unnamed protein product [Vitis vinifera]
Length = 1287
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
++V + R E+ ECPIC ES + P + C H +C+ C+L W P+
Sbjct: 942 EEVVGGIRRGENTECPICLESADD----PVLTPCAHLMCRECLLS-SWRTPLSGLCPICR 996
Query: 92 PL-----FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
L I+CP N FR+ + N K K LL +E ++ R+ S
Sbjct: 997 KLLKKTDLITCPSEN--RFRIDVEKNWKESSKISELLHCLERISQSRIGEKS 1046
>gi|156717706|ref|NP_001096393.1| tripartite motif containing 32 [Xenopus (Silurana) tropicalis]
gi|134025612|gb|AAI35999.1| LOC100124994 protein [Xenopus (Silurana) tropicalis]
Length = 649
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
V +V + E LECPIC E++ P +L CGHT C C+ L + +
Sbjct: 6 VLNVDALREVLECPICMEAYTEELLRPKLLQCGHTTCTQCLEKLLASNIN---------- 55
Query: 94 FISCPWCNLLSFRVVYKGNL 113
+ CP+C+ ++ RV NL
Sbjct: 56 GVRCPFCSRVT-RVTSLANL 74
>gi|170295836|ref|NP_080139.3| tripartite motif-containing protein 59 [Mus musculus]
gi|342187077|sp|Q922Y2.2|TRI59_MOUSE RecName: Full=Tripartite motif-containing protein 59; AltName:
Full=RING finger protein 1
Length = 403
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|413947680|gb|AFW80329.1| hypothetical protein ZEAMMB73_938992 [Zea mays]
Length = 840
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E ECP+C F+ VP VL CGH+LC +CI
Sbjct: 11 EPPECPVCLSPFDAASVVPRVLPCGHSLCGSCI 43
>gi|395830501|ref|XP_003788363.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Otolemur garnettii]
Length = 247
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDAAESQVSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|351707785|gb|EHB10704.1| RING finger protein 182 [Heterocephalus glaber]
Length = 247
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D + VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQLPEDPAEAQVSDE--LECKICYSRYNLKQRKPKVLGCCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWCN 101
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFCR 68
>gi|164663151|ref|XP_001732697.1| hypothetical protein MGL_0472 [Malassezia globosa CBS 7966]
gi|159106600|gb|EDP45483.1| hypothetical protein MGL_0472 [Malassezia globosa CBS 7966]
Length = 307
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 38 VSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISC 97
+ +EE + CP C + F++V + CGH LC +C L T P+ +SC
Sbjct: 215 IEQEEQMYCPCCKKEFSLVSRTNVLRPCGHVLCASCTTTLV-------TTPLSHGEPVSC 267
Query: 98 PWCNLLSFRVVYKGNLKFP 116
P C+ RV+ K P
Sbjct: 268 PECS----RVIPKTRDVIP 282
>gi|348528819|ref|XP_003451913.1| PREDICTED: zinc-binding protein A33-like [Oreochromis niloticus]
Length = 475
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV--QLPLFISCP 98
E+ L CPIC++ + P VL C H+ CK+C L L W +K T P+ +PL + P
Sbjct: 3 EKDLSCPICYDIYRD----PVVLSCSHSFCKDC-LQLWWREIKIKTCPICKTIPLLNNPP 57
>gi|308498277|ref|XP_003111325.1| hypothetical protein CRE_03728 [Caenorhabditis remanei]
gi|308240873|gb|EFO84825.1| hypothetical protein CRE_03728 [Caenorhabditis remanei]
Length = 330
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGL-QWAVVKFPTLPVQLPLFISCPWCNLLS 104
C +C E ++ + P +L C HT+C++CI L + + ++ T + ISCP C
Sbjct: 19 CQVCLEPYDGKRHTPKILQCAHTVCESCINVLEEQSRRRYNTGLDPTIVSISCPVC---- 74
Query: 105 FRVVYKGNLKFPRKNYFLLWMVESM 129
R K R NY L+ +V+ M
Sbjct: 75 -RTETKTPRACIRTNYQLIDVVDGM 98
>gi|444712124|gb|ELW53055.1| RING finger protein 222 [Tupaia chinensis]
Length = 220
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|354500023|ref|XP_003512102.1| PREDICTED: tripartite motif-containing protein 59 [Cricetulus
griseus]
gi|344258459|gb|EGW14563.1| Tripartite motif-containing protein 59 [Cricetulus griseus]
Length = 403
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|291400092|ref|XP_002716385.1| PREDICTED: tripartite motif-containing 59 [Oryctolagus cuniculus]
Length = 403
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT CKNC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCKNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGD 132
C + + G P N+ L+ ++E +
Sbjct: 59 CRSI-IEIAPTGIESLPV-NFALMAIIEKYQQE 89
>gi|125854141|ref|XP_001344122.1| PREDICTED: hypothetical protein LOC100004944 [Danio rerio]
Length = 600
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
ESL CP+C E F +P +L C H CK C+ WA K PV
Sbjct: 9 ESLSCPVCREIFK----IPVLLSCSHNFCKECLQQF-WATTKTQDCPV 51
>gi|402861073|ref|XP_003894932.1| PREDICTED: tripartite motif-containing protein 59 isoform 2 [Papio
anubis]
Length = 611
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 213 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 266
Query: 100 CN 101
C
Sbjct: 267 CR 268
>gi|326671061|ref|XP_688313.3| PREDICTED: RING finger and CCCH-type zinc finger domain-containing
protein 2 [Danio rerio]
Length = 931
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L CPIC+ F+ + P L C HT+CK C+ L F + + + C
Sbjct: 10 EFLSCPICYNEFDACSHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTDIDVLPVNCA 69
Query: 102 LLSF 105
LL
Sbjct: 70 LLQL 73
>gi|296201292|ref|XP_002747974.1| PREDICTED: RING finger protein 222 [Callithrix jacchus]
Length = 220
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|449270029|gb|EMC80756.1| RING finger protein 208, partial [Columba livia]
Length = 159
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C +N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 55 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCK 106
>gi|326926209|ref|XP_003209296.1| PREDICTED: tripartite motif-containing protein 59-like [Meleagris
gallopavo]
Length = 408
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L C IC+ F P VL C HT C+NC+ G+ F P+++PL CP
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRNCLEGVIQLSSNFSIWRPLRVPL--KCPN 58
Query: 100 CNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGF--CED--RQP 146
C + + G P N+ L ++E R + HS C + RQP
Sbjct: 59 CRTV-VEIPASGTESLPT-NFALKAIIEKY---RQEDHSDVATCSEHYRQP 104
>gi|340506625|gb|EGR32722.1| kelch motif family protein, putative [Ichthyophthirius multifiliis]
Length = 626
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
+ECP+C E ++ + +P L CGHT C+ C+ + + L ++ CP C
Sbjct: 1 MECPMCAELYDEIIKIPRNLPCGHTFCEYCLKQI-----------LSLKSYLECPNC--- 46
Query: 104 SFRVVYKGNLKFPR--KNYFLLWMVESMNGDRVKSHSG---------FCEDRQ 145
R ++ NL+ + KNY L + + + K H FCED Q
Sbjct: 47 --RRKFERNLQIDQLSKNYIALDLAIKQSQLQKKLHMCDKHFEFCLFFCEDCQ 97
>gi|348521088|ref|XP_003448058.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oreochromis
niloticus]
Length = 527
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 23/98 (23%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
D+ S++S E+ L C IC +F + P + CGH C++C+L W
Sbjct: 5 DESQFSIMSLEDELTCSICLSTF----DCPVTIPCGHNFCQDCLLA-SWEDS-------- 51
Query: 91 LPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVES 128
SCP C R V+ + +KN L+ +VE+
Sbjct: 52 ----YSCPQC-----RTVFDTKPEL-KKNTVLIAVVET 79
>gi|308498143|ref|XP_003111258.1| hypothetical protein CRE_03959 [Caenorhabditis remanei]
gi|308240806|gb|EFO84758.1| hypothetical protein CRE_03959 [Caenorhabditis remanei]
Length = 301
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
+C IC +FN + +L CGHT C CI +Q K+ ++ CP C
Sbjct: 30 QCQICCTNFNETTRIAQLLHCGHTFCMECIGNIQ----KYGN-----SAYLECPTC---- 76
Query: 105 FRVVYKGNLKFPRKNYFLLWMVESM 129
R K +L N+ + M+ +
Sbjct: 77 -RAETKCDLNEIATNFLAMEMIRKL 100
>gi|226502861|ref|NP_001142606.1| uncharacterized protein LOC100274874 [Zea mays]
gi|194702306|gb|ACF85237.1| unknown [Zea mays]
gi|195607262|gb|ACG25461.1| hypothetical protein [Zea mays]
gi|195625324|gb|ACG34492.1| hypothetical protein [Zea mays]
Length = 342
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 34 VSSVVSREESLECPICWES-FNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
+S + E SL CPIC ++ FN PY L CGH CK C G +V F + P
Sbjct: 226 ISETLKYEYSLTCPICLDTLFN-----PYALSCGHLFCKACACGA-ASVYIFQGVK-SAP 278
Query: 93 LFISCPWCNLLSF--RVVYKGN----LKFPRKNYFLLWMVES 128
CP C + R V LK K+YFL + E
Sbjct: 279 PEAKCPVCRAVGVFDRAVRMTELELLLKRRDKDYFLQRLREE 320
>gi|414872121|tpg|DAA50678.1| TPA: putative SPX (SYG1/Pho81/XPR1) domain-containing protein [Zea
mays]
Length = 365
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 34 VSSVVSREESLECPICWES-FNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
+S + E SL CPIC ++ FN PY L CGH CK C G +V F + P
Sbjct: 249 ISETLKYEYSLTCPICLDTLFN-----PYALSCGHLFCKACACGAA-SVYIFQGVK-SAP 301
Query: 93 LFISCPWCNLLSF--RVVYKGN----LKFPRKNYFLLWMVES 128
CP C + R V LK K+YFL + E
Sbjct: 302 PEAKCPVCRAVGVFDRAVRMTELELLLKRRDKDYFLQRLREE 343
>gi|119590093|gb|EAW69687.1| hCG1642804, isoform CRA_a [Homo sapiens]
gi|119590096|gb|EAW69690.1| hCG1642804, isoform CRA_a [Homo sapiens]
Length = 250
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 31/115 (26%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E+ L+CPIC E F P +L CGH+ CK C++ +L L + CP C
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLV----------SLSCHLDAELRCPVC 56
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
R G+ P N L ++E++ GD +V H S FCE Q
Sbjct: 57 -----RQAVDGSSSLP--NVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQ 104
>gi|260816137|ref|XP_002602828.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
gi|229288141|gb|EEN58840.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
Length = 348
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
E+S+ C IC + F P +L CGHT C+ C++ ++ PT V++PL
Sbjct: 12 EDSMSCGICLQPFKR----PKILPCGHTFCEECLVEAARGGLRCPTCRVRVPL 60
>gi|47523460|ref|NP_999351.1| E3 ubiquitin-protein ligase TRIM50 [Sus scrofa]
gi|56404687|sp|Q865W2.1|TRI50_PIG RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465654|gb|AAL91074.1| tripartite motif protein 50 [Sus scrofa]
Length = 486
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CP+C E F P +L CGH+ CK C+L L
Sbjct: 6 SVPELEDRLQCPVCLEVFKE----PLMLQCGHSYCKGCLLSL 43
>gi|395842885|ref|XP_003794238.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Otolemur
garnettii]
Length = 487
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 37 VVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
V+ E+ L+CPIC E F P +L CGH+ CK+C++ L
Sbjct: 7 VLELEDQLQCPICLEVFKE----PLMLQCGHSYCKDCLVSL 43
>gi|297672397|ref|XP_002814288.1| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Pongo
abelii]
Length = 403
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|432910810|ref|XP_004078536.1| PREDICTED: RING finger protein 183-like [Oryzias latipes]
Length = 299
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E EC IC+ S++ + P VL CGHT C C+ + + LP CP C
Sbjct: 93 EDTECSICFCSYDNIFKTPKVLACGHTFCLECLARINVTSAELKNLP--------CPVCR 144
Query: 102 LLS 104
++
Sbjct: 145 EVT 147
>gi|332214604|ref|XP_003256425.1| PREDICTED: tripartite motif-containing protein 59 isoform 1
[Nomascus leucogenys]
gi|332214606|ref|XP_003256426.1| PREDICTED: tripartite motif-containing protein 59 isoform 2
[Nomascus leucogenys]
gi|332214608|ref|XP_003256427.1| PREDICTED: tripartite motif-containing protein 59 isoform 3
[Nomascus leucogenys]
gi|332214612|ref|XP_003256429.1| PREDICTED: tripartite motif-containing protein 59 isoform 5
[Nomascus leucogenys]
gi|332214614|ref|XP_003256430.1| PREDICTED: tripartite motif-containing protein 59 isoform 6
[Nomascus leucogenys]
gi|332214618|ref|XP_003256432.1| PREDICTED: tripartite motif-containing protein 59 isoform 8
[Nomascus leucogenys]
Length = 403
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|301627584|ref|XP_002942953.1| PREDICTED: RING finger protein 208-like [Xenopus (Silurana)
tropicalis]
Length = 247
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C +N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 126 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCK 177
>gi|403265974|ref|XP_003925180.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
59 [Saimiri boliviensis boliviensis]
Length = 600
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 202 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 255
Query: 100 CN 101
C
Sbjct: 256 CR 257
>gi|401411045|ref|XP_003884970.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325119389|emb|CBZ54942.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 812
Score = 42.0 bits (97), Expect = 0.28, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 45 ECPICWESFNMVE-NVPYVLWCGHTLCKNCIL 75
ECPIC E F E + P VL CGH++C +CIL
Sbjct: 28 ECPICLEKFECEEMHRPKVLTCGHSMCFSCIL 59
>gi|403275050|ref|XP_003929273.1| PREDICTED: RING finger protein 222 [Saimiri boliviensis
boliviensis]
Length = 234
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 19 SLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
S+ A SE D S ECP+C+E F +E L CGH C +C++
Sbjct: 8 SMPTPRAMSEGESKDSSGS-------ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYL 60
Query: 79 WAVVKFPTLPVQLPLFISCPWCNLLSF 105
+ + Q+ + CP C ++F
Sbjct: 61 LST----RVDGQVQRILVCPICRYVTF 83
>gi|332214610|ref|XP_003256428.1| PREDICTED: tripartite motif-containing protein 59 isoform 4
[Nomascus leucogenys]
Length = 410
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 12 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL--KCPN 65
Query: 100 CN 101
C
Sbjct: 66 CR 67
>gi|359074115|ref|XP_003587130.1| PREDICTED: roquin [Bos taurus]
gi|296479059|tpg|DAA21174.1| TPA: hypothetical protein BOS_15973 [Bos taurus]
Length = 736
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|326930174|ref|XP_003211226.1| PREDICTED: RING finger protein 208-like [Meleagris gallopavo]
Length = 309
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C +N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 188 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCK 239
>gi|156365078|ref|XP_001626669.1| predicted protein [Nematostella vectensis]
gi|156213554|gb|EDO34569.1| predicted protein [Nematostella vectensis]
Length = 457
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CPIC+ F + P L CGHT+CK C+ L
Sbjct: 10 EFLTCPICYHEFEDRQRGPISLACGHTICKACLSQL 45
>gi|147900177|ref|NP_001090370.1| ring finger protein 208 [Xenopus laevis]
gi|114107888|gb|AAI23251.1| MGC154509 protein [Xenopus laevis]
Length = 235
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C +N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 114 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCK 165
>gi|431894049|gb|ELK03855.1| RING finger protein 222 [Pteropus alecto]
Length = 211
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|363740286|ref|XP_415552.2| PREDICTED: RING finger protein 208-like [Gallus gallus]
Length = 273
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E LECP C +N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 152 EPLECPTCGHMYNFTNKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCK 203
>gi|224032023|gb|ACN35087.1| unknown [Zea mays]
Length = 212
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 34 VSSVVSREESLECPICWES-FNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
+S + E SL CPIC ++ FN PY L CGH CK C G +V F + P
Sbjct: 96 ISETLKYEYSLTCPICLDTLFN-----PYALSCGHLFCKACACG-AASVYIFQGVK-SAP 148
Query: 93 LFISCPWCNLLSF--RVVYKGN----LKFPRKNYFLLWMVES 128
CP C + R V LK K+YFL + E
Sbjct: 149 PEAKCPVCRAVGVFDRAVRMTELELLLKRRDKDYFLQRLREE 190
>gi|410904543|ref|XP_003965751.1| PREDICTED: RING finger protein 183-like [Takifugu rubripes]
Length = 324
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E EC +C+ +++ V P +L CGHT C C+ + + TL SCP C
Sbjct: 108 EDTECAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSAELKTL--------SCPICR 159
Query: 102 LLS 104
L+
Sbjct: 160 ELT 162
>gi|302563981|ref|NP_001181514.1| RING finger protein 222 [Macaca mulatta]
Length = 220
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|308467337|ref|XP_003095917.1| hypothetical protein CRE_07746 [Caenorhabditis remanei]
gi|308244288|gb|EFO88240.1| hypothetical protein CRE_07746 [Caenorhabditis remanei]
Length = 206
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
Query: 45 ECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN-L 102
ECP+C + F N+P VL CGHT C +C T + P +I CP+ +
Sbjct: 138 ECPVCLQEFGEEGHNIPKVLDCGHTFCLSC------------TKKIAKPGYIKCPFDGVI 185
Query: 103 LSFRVVYKGNLKFPRKNYFLLWM 125
L F+ K +L+ KNY M
Sbjct: 186 LIFK--RKKDLEGHPKNYKCYAM 206
>gi|341888293|gb|EGT44228.1| hypothetical protein CAEBREN_07428 [Caenorhabditis brenneri]
Length = 211
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 46 CPICWESFNMVENV--PYVLWCGHTLCKNC 73
CPIC+E + ++V P VL CGHT+C++C
Sbjct: 134 CPICYEKYTERDDVRTPRVLACGHTICEDC 163
>gi|124512098|ref|XP_001349182.1| Zinc finger, C3HC4 type, putative [Plasmodium falciparum 3D7]
gi|23498950|emb|CAD51028.1| Zinc finger, C3HC4 type, putative [Plasmodium falciparum 3D7]
Length = 2162
Score = 41.6 bits (96), Expect = 0.33, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 16 KNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+N SL ++ A E D+S S CPI + + +N PY+L CGH +CKNC+
Sbjct: 2077 ENGSLLSNSLAVEV---DLSGCFFFHSSFTCPISRDKSSR-DNPPYLLTCGHAICKNCV 2131
>gi|167998999|ref|XP_001752205.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162696600|gb|EDQ82938.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1520
Score = 41.6 bits (96), Expect = 0.33, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 27 SECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT 86
SE S V S EE ECPIC E ++ + VL CGH LC C+L L V+ T
Sbjct: 1179 SESSISVSKPVESNEE--ECPICHE---ILGSRFMVLPCGHVLCCKCMLSL----VERST 1229
Query: 87 LPVQLPLFISCPWC 100
LP Q I+CP C
Sbjct: 1230 LP-QSQKKINCPSC 1242
>gi|73955706|ref|XP_546612.2| PREDICTED: RING finger protein 222 [Canis lupus familiaris]
Length = 201
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|268578013|ref|XP_002643989.1| Hypothetical protein CBG17369 [Caenorhabditis briggsae]
Length = 185
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 DVSSV-VSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILG-LQWAVVKFPTLPVQ 90
D+S V V E+L C +C FN+ VP L CGH+ C+ CI G +Q P +
Sbjct: 26 DLSDVCVINVETLRCAVC---FNIYTGVPRTLTCGHSFCQQCIEGVIQEERDDVPNPNGR 82
Query: 91 LPLFISCPWC 100
L L CP C
Sbjct: 83 LSLH--CPIC 90
>gi|145530994|ref|XP_001451269.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418913|emb|CAK83872.1| unnamed protein product [Paramecium tetraurelia]
Length = 571
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E L CP C FN EN P +L CGHT+C+ CI Q+ + ISCP
Sbjct: 2 EELICPQCHNIFNEFENTPLMLPDCGHTICQKCI---QYMLSNVDGQQ------ISCPED 52
Query: 101 NLLSF---RVVYKGNL---KFPRKNYFLLWMV 126
L + ++ KG +FP KN LL M+
Sbjct: 53 KYLFYSNPSILAKGKTHISEFP-KNCQLLKMI 83
>gi|355568231|gb|EHH24512.1| RING finger protein 222 [Macaca mulatta]
Length = 220
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|332228803|ref|XP_003263580.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Nomascus
leucogenys]
gi|332228805|ref|XP_003263581.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Nomascus
leucogenys]
Length = 247
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D V + S E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDTVETQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|73957766|ref|XP_546929.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Canis lupus
familiaris]
Length = 487
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELEDRLQCPICLEVFKE----PMMLQCGHSYCKGCLVSL 43
>gi|410984568|ref|XP_003998600.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Felis catus]
Length = 487
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELEDRLQCPICLEVFKE----PMMLQCGHSYCKGCLVNL 43
>gi|345484383|ref|XP_001603217.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like isoform 1 [Nasonia
vitripennis]
gi|345484385|ref|XP_003425020.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like isoform 2 [Nasonia
vitripennis]
Length = 921
Score = 41.6 bits (96), Expect = 0.36, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
E L CP+C F++ P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLH 46
>gi|301776204|ref|XP_002923519.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Ailuropoda
melanoleuca]
Length = 487
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELEDRLQCPICLEVFKE----PMMLQCGHSYCKGCLVSL 43
>gi|341891468|gb|EGT47403.1| hypothetical protein CAEBREN_00878 [Caenorhabditis brenneri]
Length = 335
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
EC IC +++ ++P +L C HT+C CI L+ + ++I CP C + +
Sbjct: 20 ECRICTVAYDDNRHLPKILQCAHTICNACINVLEAEGRRRAGNMDMTQVYIVCPVCRVSN 79
Query: 105 F-----------RVVYKGNLKFPRKNYFLLWMVESMNGD 132
+ +++ + R NY L+ +V+ M G+
Sbjct: 80 YPSCYHVIFVFLQMLTQAPRNSIRTNYQLIDVVDVMRGE 118
>gi|193208549|ref|NP_506726.2| Protein T01G5.7 [Caenorhabditis elegans]
gi|169402815|emb|CAB03269.2| Protein T01G5.7 [Caenorhabditis elegans]
Length = 260
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILG 76
S +E ECPIC +++ + +P V+ CGHT+C CI+
Sbjct: 178 TESNAKQESRKECPICCWNYDNEDRLPRVMDCGHTMCHTCIIS 220
>gi|74004095|ref|XP_545347.2| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Canis lupus
familiaris]
Length = 247
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D + VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDTAEAQVSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|115457136|ref|NP_001052168.1| Os04g0177300 [Oryza sativa Japonica Group]
gi|113563739|dbj|BAF14082.1| Os04g0177300, partial [Oryza sativa Japonica Group]
Length = 664
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 14 GLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNC 73
G++ DS + S S+ ++V + + + ECPIC ES + P + C H +C+ C
Sbjct: 396 GVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLES---ASDDPVLTPCAHRMCREC 452
Query: 74 ILGLQWAVVKFP----TLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESM 129
+L P P+ I+ P + F+V + N K K L+ ++E +
Sbjct: 453 LLSSWRTPSGGPCPLCRSPITKSELITLP--SQCRFQVDPENNWKDSCKVIKLIKILEGL 510
Query: 130 NGDRVKS 136
R KS
Sbjct: 511 QEKREKS 517
>gi|122692451|ref|NP_001073779.1| tripartite motif-containing protein 59 [Bos taurus]
gi|86437977|gb|AAI12617.1| Hypothetical LOC540154 [Bos taurus]
Length = 361
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|344289749|ref|XP_003416603.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like [Loxodonta
africana]
Length = 487
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|432887960|ref|XP_004074997.1| PREDICTED: RING finger protein 208-like [Oryzias latipes]
Length = 259
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L+CP C ++N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 140 EPLDCPTCGHTYNFAGKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCR 191
>gi|395836422|ref|XP_003791155.1| PREDICTED: RING finger protein 222 [Otolemur garnettii]
Length = 220
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGTSRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIICPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|341884394|gb|EGT40329.1| hypothetical protein CAEBREN_02814 [Caenorhabditis brenneri]
Length = 155
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 19 SLKASEAASECSDDDVSSVVSREESL-ECPICWESFNMVEN---VPYVLWCGHTLCKNCI 74
++A E A E + V + + E + ECP+C + VPY CGHT CK C+
Sbjct: 39 EIEAEEKALENAKKKVETQKEKAEGVTECPLCCNPYEHQLTSIYVPYQFECGHTFCKTCV 98
Query: 75 LGL-QWAVVKFPTLPVQLPLFISCPWCNLLSF 105
+ + P+ I CP+C + +
Sbjct: 99 NKMFDDKNNAASEDDRKGPMRIECPFCRKIEY 130
>gi|110773277|ref|XP_392690.3| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Apis mellifera]
Length = 558
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 40 REESLECPICWESFNMVE-NVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
R LEC +C E F + VP +L CGHT+C +C+L L+ P + Q F+ CP
Sbjct: 21 RTNVLECRVCEEVFTIDGIKVPRLLHCGHTVCHSCLLRLR------PCMTDQ--QFLLCP 72
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ + + + N+ +KN+ L+ ++E +
Sbjct: 73 FDRQPTG--ISQNNIYNLKKNFALIELLERLE 102
>gi|426218032|ref|XP_004003254.1| PREDICTED: tripartite motif-containing protein 59 [Ovis aries]
Length = 404
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 7 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIPL--KCPN 60
Query: 100 CN 101
C
Sbjct: 61 CR 62
>gi|402896626|ref|XP_003911392.1| PREDICTED: RING finger protein 183 isoform 1 [Papio anubis]
Length = 192
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
RE ECPICW FN + P +L C H+ C C+ L P Q L CP
Sbjct: 6 GRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHLSLVT------PAQRRLL--CP 57
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQ 145
C + + + P L + R++ H E RQ
Sbjct: 58 LCRQPTVLALGQPVTDLPTDTAMLTLL-------RLEPHHVILEGRQ 97
>gi|308459488|ref|XP_003092063.1| hypothetical protein CRE_24267 [Caenorhabditis remanei]
gi|308254395|gb|EFO98347.1| hypothetical protein CRE_24267 [Caenorhabditis remanei]
Length = 792
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGL 77
ESLEC IC +N + +P ++ CGHT+C++C +
Sbjct: 104 ESLECKICVRQYNETDRIPRIIPVCGHTICEDCARNI 140
>gi|149756002|ref|XP_001504541.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Equus
caballus]
Length = 487
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|410904313|ref|XP_003965636.1| PREDICTED: RING finger protein 208-like [Takifugu rubripes]
Length = 262
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L+CP C ++N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 143 EPLDCPTCGHTYNFTGKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCR 194
>gi|355567513|gb|EHH23854.1| RING finger protein 183 [Macaca mulatta]
Length = 192
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
RE ECPICW FN + P +L C H+ C C+ L P Q L CP
Sbjct: 6 GRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHLSLVT------PAQRRLL--CP 57
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQ 145
C + + + P L + R++ H E RQ
Sbjct: 58 LCRQPTVLALGQPVTDLPTDTAMLTLL-------RLEPHHVILEGRQ 97
>gi|335299840|ref|XP_003358702.1| PREDICTED: tripartite motif-containing protein 59 isoform 2 [Sus
scrofa]
gi|335299842|ref|XP_001925596.3| PREDICTED: tripartite motif-containing protein 59 isoform 1 [Sus
scrofa]
Length = 403
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFE----DPRVLPCSHTFCRNCLEDILQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|332022378|gb|EGI62690.1| Roquin [Acromyrmex echinatior]
Length = 1028
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
E L CPIC F++ P L CGHT+C+ C+ L
Sbjct: 52 EFLSCPICCHDFDVAIRGPISLGCGHTICRACLANLH 88
>gi|426244497|ref|XP_004016058.1| PREDICTED: tripartite motif-containing protein 59-like [Ovis aries]
Length = 402
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|301791023|ref|XP_002930511.1| PREDICTED: tripartite motif-containing protein 59-like [Ailuropoda
melanoleuca]
Length = 403
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFE----DPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPS 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|448825574|ref|YP_007418505.1| putative ring finger protein [Megavirus lba]
gi|444236759|gb|AGD92529.1| putative ring finger protein [Megavirus lba]
Length = 80
Score = 41.2 bits (95), Expect = 0.41, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 16/61 (26%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E ++CPIC+ S N+V++ L CGHT+C +CIL + LP CP C
Sbjct: 29 ETLVDCPICYGSENLVQSK---LICGHTICLDCILNI-------------LPNSKKCPVC 72
Query: 101 N 101
N
Sbjct: 73 N 73
>gi|402595025|gb|EJW88951.1| hypothetical protein WUBG_00140 [Wuchereria bancrofti]
Length = 487
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
D V +L CP+C F + + P++L CGH+ C+NCI +
Sbjct: 329 DGAERVTVDSSALHCPVC---FCVFASAPFILKCGHSFCQNCIKNIVENSYS-------- 377
Query: 92 PLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESM 129
CP C R V ++F R NY + +++S+
Sbjct: 378 EQIFECPMC-----RQVISSEIRFTR-NYLVDALLQSV 409
>gi|380017229|ref|XP_003692562.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Apis florea]
Length = 559
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 40 REESLECPICWESFNMVE-NVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
R LEC +C E F + VP +L CGHT+C +C+L L+ P + Q F+ CP
Sbjct: 21 RTNVLECRVCEEVFTIDGIKVPRLLHCGHTVCHSCLLRLR------PCMTDQ--QFLLCP 72
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ + + + N+ +KN+ L+ ++E +
Sbjct: 73 FDRQPTG--ISQNNIYNLKKNFALIELLERLE 102
>gi|355753096|gb|EHH57142.1| RING finger protein 183 [Macaca fascicularis]
Length = 192
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
RE ECPICW FN + P +L C H+ C C+ L P Q L CP
Sbjct: 6 GRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHLSLVT------PAQRRLL--CP 57
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQ 145
C + + + P L + R++ H E RQ
Sbjct: 58 LCRQPTVLALGQPVTDLPTDTAMLTLL-------RLEPHHVILEGRQ 97
>gi|348513811|ref|XP_003444435.1| PREDICTED: RING finger protein 208-like [Oreochromis niloticus]
Length = 258
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L+CP C ++N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 139 EPLDCPTCGHTYNFAGKRPRILSCLHSVCEECLQILYESCPKY--------KFISCPTCR 190
>gi|326931128|ref|XP_003211686.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Meleagris
gallopavo]
Length = 818
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
S+ + E+ L CPIC E F P +L CGH+ CK+C+L L
Sbjct: 6 SIDNLEDQLLCPICLEVFKE----PLMLQCGHSYCKSCVLSL 43
>gi|157822147|ref|NP_001102415.1| tripartite motif-containing protein 59 [Rattus norvegicus]
gi|149048334|gb|EDM00910.1| rCG63400 [Rattus norvegicus]
gi|197245953|gb|AAI68884.1| Tripartite motif-containing 59 [Rattus norvegicus]
Length = 403
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F+ P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFD----DPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|47195169|emb|CAF94043.1| unnamed protein product [Tetraodon nigroviridis]
Length = 281
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 29/201 (14%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN-- 101
LEC IC+ FN V P +L C HT C C+ + + P I CP C
Sbjct: 88 LECSICFSQFNNVFRCPKMLQCKHTFCLECLARINVKSAQ--------PSTIQCPLCRGV 139
Query: 102 ---------LLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSG 152
L+ L + + + + S +VK + QP S
Sbjct: 140 TTLPALGLPTLATDASVLPYLPAAMQRVYSVRFLRSKGRLQVKRYGWLTLTVQP----SY 195
Query: 153 SSTFGNQLNRGNH--RRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFF 210
SS F ++ + G RRG P P NR A LT I + R + F
Sbjct: 196 SSCFFSRSSAGVRRWRRGSDRSLDVGLPSPPAGNRG---AAGGLTEALIQLTGRPACRAF 252
Query: 211 VHLTAKFPLVVIFLLIVVYAI 231
+ L + L+V+ + I+++ I
Sbjct: 253 L-LASMVLLMVLLMGIIIFLI 272
>gi|357166959|ref|XP_003580935.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Brachypodium distachyon]
Length = 1137
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 14 GLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNC 73
G+++DS + + S ++V + + + ECPIC ES + + P + C H +C+ C
Sbjct: 869 GVQSDSGRLAVVPSRAYVEEVVEEIRQGATTECPICLESAS---DDPVITPCAHRMCREC 925
Query: 74 ILGLQWAVVKFP----TLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESM 129
+L P PV I P F V K N K K L+ +E +
Sbjct: 926 LLSSWSTPAGGPCPLCRSPVTKDQLIKLP--GKCRFEVDAKNNWKDSCKVAKLIMTLEGL 983
Query: 130 NGDRVKS 136
R KS
Sbjct: 984 EKKREKS 990
>gi|296491141|tpg|DAA33214.1| TPA: tripartite motif-containing 59 [Bos taurus]
Length = 362
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQATGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|281341327|gb|EFB16911.1| hypothetical protein PANDA_020982 [Ailuropoda melanoleuca]
Length = 402
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFE----DPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPS 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|12848905|dbj|BAB28131.1| unnamed protein product [Mus musculus]
Length = 196
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|312083158|ref|XP_003143744.1| hypothetical protein LOAG_08164 [Loa loa]
gi|307761093|gb|EFO20327.1| hypothetical protein LOAG_08164 [Loa loa]
Length = 185
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 23 SEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVV 82
SE+ D + +L CP+C F + +VP++L CGH+ C+NCI +
Sbjct: 20 SESRRTAKIDGAERITVDSSALHCPVC---FCIFASVPFILKCGHSFCQNCIKNI----- 71
Query: 83 KFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESM 129
+ CP C R V ++F KN+ +++S+
Sbjct: 72 -VENSYSERDAVFECPMC-----RQVISSEIRFT-KNFLADALLQSV 111
>gi|281344812|gb|EFB20396.1| hypothetical protein PANDA_012667 [Ailuropoda melanoleuca]
Length = 241
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELEDRLQCPICLEVFKE----PMMLQCGHSYCKGCLVSL 43
>gi|380019305|ref|XP_003693550.1| PREDICTED: roquin-like [Apis florea]
Length = 914
Score = 41.2 bits (95), Expect = 0.43, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
E L CP+C F++ P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLH 46
>gi|328790387|ref|XP_624874.2| PREDICTED: roquin isoform 2 [Apis mellifera]
Length = 909
Score = 41.2 bits (95), Expect = 0.43, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
E L CP+C F++ P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLH 46
>gi|260792746|ref|XP_002591375.1| hypothetical protein BRAFLDRAFT_227502 [Branchiostoma floridae]
gi|229276580|gb|EEN47386.1| hypothetical protein BRAFLDRAFT_227502 [Branchiostoma floridae]
Length = 550
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F + + VP +L CGHTLC +C+ +LPL I CP+
Sbjct: 4 LECGVCEDVFGLQGDKVPRLLLCGHTLCHDCL--------------TRLPLHGRAIRCPF 49
Query: 100 CNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
++ + + +KN+ LL ++E + R + CE
Sbjct: 50 DRQMT--EIGDSGVWGLKKNFALLELLERLQFGRESPGALLCE 90
>gi|344288994|ref|XP_003416231.1| PREDICTED: tripartite motif-containing protein 59-like [Loxodonta
africana]
Length = 402
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPS 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|149724297|ref|XP_001504872.1| PREDICTED: RING finger protein 222-like [Equus caballus]
Length = 209
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHMFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|126297591|ref|XP_001364607.1| PREDICTED: RING finger protein 183-like [Monodelphis domestica]
Length = 190
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
++ + +E ECP+CW SFN P +L C H+ C C+
Sbjct: 1 MAEKLGKEPEAECPVCWNSFNNTFRTPKLLDCRHSFCIECL 41
>gi|109110532|ref|XP_001102310.1| PREDICTED: RING finger protein 183-like isoform 2 [Macaca mulatta]
Length = 192
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
RE ECPICW FN + P +L C H+ C C+ L P Q L CP
Sbjct: 6 GRELEAECPICWNPFNNTFHTPKMLDCCHSFCVECLAHLSLVT------PAQRRLL--CP 57
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQ 145
C + + + P L + R++ H E RQ
Sbjct: 58 LCRQPTVLALGQPVTDLPTDTAMLTLL-------RLEPHHVILEGRQ 97
>gi|149738500|ref|XP_001488852.1| PREDICTED: RING finger protein 183-like [Equus caballus]
Length = 192
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
RE ECP+CW FN + P VL C H+ C C+
Sbjct: 6 GREPEAECPVCWNPFNNTFHTPKVLDCCHSFCLECL 41
>gi|407971937|gb|AFU52971.1| tumor necrosis factor receptor-associated factor 6 [Mizuhopecten
yessoensis]
Length = 657
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
D V+ RE+ +CPIC +V PY CGH C+NCI P PV
Sbjct: 82 DFEFVLPREDKYDCPICL----LVLREPYQTECGHRFCQNCIKRWLRETESEPRCPV 134
>gi|326930986|ref|XP_003211618.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Meleagris
gallopavo]
Length = 547
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
++++ EE L C IC FN VP + CGH C +C L L W Q+ F
Sbjct: 12 NLLALEEELTCSICLCIFN----VPVTVPCGHNFCASC-LELTWT--------DQVRDF- 57
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNG 131
SCP C R + G + RKN L +VE + G
Sbjct: 58 SCPQC-----RTTFPGRPQL-RKNTVLCRVVEQLQG 87
>gi|260833901|ref|XP_002611950.1| hypothetical protein BRAFLDRAFT_91834 [Branchiostoma floridae]
gi|229297323|gb|EEN67959.1| hypothetical protein BRAFLDRAFT_91834 [Branchiostoma floridae]
Length = 568
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL-------QWAVVKFPTLPVQLPLF 94
E L CP+C + F+ P L C H LC+ C+ GL + V FP
Sbjct: 51 EELRCPVCLDVFSE----PLFLPCCHNLCRECVRGLIESRGGTAYGVHMFP--------- 97
Query: 95 ISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQP 146
CP C + VV + ++ ++N L MVE R+ + S R P
Sbjct: 98 --CPECR---YDVVVR-SVDSLQRNLVLQQMVERCKQGRLAAQSSGAHARGP 143
>gi|341890318|gb|EGT46253.1| hypothetical protein CAEBREN_16338 [Caenorhabditis brenneri]
Length = 350
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 18/121 (14%)
Query: 20 LKASEAASECSDDDVSSVVSREES----LECPICWESFN--MVENVPYVL-WCGHTLCKN 72
L+ E A CS ++ + L C +C ++ M + P +L CGHT C+
Sbjct: 212 LREDEGAKLCSKEEEEPPADYDMDILGDLSCEVCHLEYHEFMDAHAPRMLHKCGHTFCEQ 271
Query: 73 CILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGD 132
C++ L + FI CP C++ + V KG ++ KNY LL+++ +N D
Sbjct: 272 CLVELA---------KLNKNEFIICPTCSVKT--PVRKGTIEQFPKNYPLLYIIRKVNRD 320
Query: 133 R 133
+
Sbjct: 321 K 321
>gi|17505905|ref|NP_492366.1| Protein C36B1.9 [Caenorhabditis elegans]
gi|3874781|emb|CAB02274.1| Protein C36B1.9 [Caenorhabditis elegans]
Length = 674
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 20 LKASEAASECSDDDVSSVVSREESLE----CPICWESFNMVENVPYVLWCGHTLCKNCIL 75
L+ E E +++S + E+ + C +C++ ++ N VL CGHT C C++
Sbjct: 33 LEVDEPKEEIKKNEMSRIDIIREAADNVQSCRVCYDEYHSSSNQARVLQCGHTFCTRCVV 92
Query: 76 GLQWAVVKFPTLPVQLPLFISCPWCNLLSFRV 107
G + I CP C ++ +V
Sbjct: 93 GCSSTMNN-----TSEEFGIKCPECRKINEQV 119
>gi|297486771|ref|XP_002695882.1| PREDICTED: RING finger protein 224 [Bos taurus]
gi|296476644|tpg|DAA18759.1| TPA: A030009H04Rik-like [Bos taurus]
Length = 183
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVL------WCGHTLCKNCILGLQ------WAV 81
+ S+ R E L+C IC+ FN+ + P L CGHTLC C+ L AV
Sbjct: 7 IPSLPERGE-LDCNICYRPFNLGDRAPRRLPGTARARCGHTLCTACLRELAARGDGGGAV 65
Query: 82 VKFPTLPVQLPLFISCPWCN 101
+ V+L I+CP+C
Sbjct: 66 ARA----VRLRRLITCPFCR 81
>gi|116089300|ref|NP_796034.2| RING finger protein 222 [Mus musculus]
gi|215273879|sp|Q8CEF8.2|RN222_MOUSE RecName: Full=RING finger protein 222
gi|148678508|gb|EDL10455.1| RIKEN cDNA 9930039A11 [Mus musculus]
gi|151555229|gb|AAI48492.1| Ring finger protein 222 [synthetic construct]
gi|157169952|gb|AAI53085.1| Ring finger protein 222 [synthetic construct]
Length = 211
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLDGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|379642601|ref|NP_001243831.1| tripartite motif-containing protein 59 [Equus caballus]
Length = 403
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|307188574|gb|EFN73302.1| GTP-binding protein ARD-1 [Camponotus floridanus]
Length = 546
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 44 LECPICWESFNMVE-NVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
LEC +C E F + VP +L CGHT+C C+L L+ +Q F+ CP+
Sbjct: 25 LECRVCEEVFTVDGVKVPRLLHCGHTVCHACLLRLRTC--------MQDQQFLLCPFDRQ 76
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ V++ ++ +KN+ L+ ++E +
Sbjct: 77 PT--AVHENSVYSLKKNFALIELLERLE 102
>gi|156331984|ref|XP_001619224.1| hypothetical protein NEMVEDRAFT_v1g152025 [Nematostella vectensis]
gi|156201997|gb|EDO27124.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 33 DVSSVVSR-EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
D +++V R ++ +ECPIC E F P VL C HT C C++GL P
Sbjct: 2 DKTNIVERLQKEVECPICLERFKD----PRVLPCLHTFCYECLVGLASRYKTEGKWP--- 54
Query: 92 PLFISCPWCNLLSFRVVYKGNLKFPRKNYFL--LWMVESMNGDRVKSHSGFCEDRQPASS 149
CP C ++ V + + N+ + L V + K H C + A
Sbjct: 55 -----CPQCKMVV--QVSPAEVSSLKVNFLMNTLLSVVTNGSKSAKPHCQMCTSQDHA-- 105
Query: 150 SSGSSTFGNQLNR---GNHRR---GQHHH 172
G + G + +H+R QHHH
Sbjct: 106 KGGCTDCGELVCEACIASHKRMRATQHHH 134
>gi|355753747|gb|EHH57712.1| RING finger protein 222 [Macaca fascicularis]
Length = 194
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRILVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|242022302|ref|XP_002431579.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516887|gb|EEB18841.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 680
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
E L CP+C F+ P L CGH++C+ C+ L F ++L
Sbjct: 10 EFLSCPVCCNGFDTESRGPVTLGCGHSICRGCLTSLHRKQCPFDQAQIRL 59
>gi|444730209|gb|ELW70599.1| WD repeat-containing protein 31 [Tupaia chinensis]
Length = 595
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 18/76 (23%)
Query: 17 NDSLKASEAASECSDDDVSSVVSR------------------EESLECPICWESFNMVEN 58
D + + SE +D + S+ R E ECP+CW FN +
Sbjct: 369 EDKMMGQQEGSEDTDLEEGSIARRFLQGLLACALGMAEQQGQEREAECPVCWNPFNNTFH 428
Query: 59 VPYVLWCGHTLCKNCI 74
P VL C H+ C C+
Sbjct: 429 TPKVLDCCHSFCVECL 444
>gi|341901319|gb|EGT57254.1| hypothetical protein CAEBREN_12231 [Caenorhabditis brenneri]
Length = 570
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
LEC +C F+ ++VP +L CGHT C CIL ++
Sbjct: 123 LECGVCCHDFDDKDHVPKMLSCGHTFCWQCILKIE 157
>gi|332251136|ref|XP_003274703.1| PREDICTED: RING finger protein 222 [Nomascus leucogenys]
Length = 220
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|402898706|ref|XP_003912361.1| PREDICTED: RING finger protein 222 [Papio anubis]
Length = 220
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|327356510|gb|EGE85367.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis
ATCC 18188]
Length = 1150
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
+ DV S + E +ECP+C F++ EN CGH+ C C +A++ P+ +
Sbjct: 817 EPDVVSRLKANEDMECPVC---FDVAENAIIFFPCGHSTCAEC-----FAIISDPSRLLA 868
Query: 91 LPL----FISCPWCNLL 103
+ I CP C L
Sbjct: 869 QGIDGEASIKCPHCRTL 885
>gi|239608047|gb|EEQ85034.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis
ER-3]
Length = 1150
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
+ DV S + E +ECP+C F++ EN CGH+ C C +A++ P+ +
Sbjct: 817 EPDVVSRLKANEDMECPVC---FDVAENAIIFFPCGHSTCAEC-----FAIISDPSRLLA 868
Query: 91 LPL----FISCPWCNLL 103
+ I CP C L
Sbjct: 869 QGIDGEASIKCPHCRTL 885
>gi|261200100|ref|XP_002626451.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis
SLH14081]
gi|239594659|gb|EEQ77240.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis
SLH14081]
Length = 1150
Score = 41.2 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
+ DV S + E +ECP+C F++ EN CGH+ C C +A++ P+ +
Sbjct: 817 EPDVVSRLKANEDMECPVC---FDVAENAIIFFPCGHSTCAEC-----FAIISDPSRLLA 868
Query: 91 LPL----FISCPWCNLL 103
+ I CP C L
Sbjct: 869 QGIDGEASIKCPHCRTL 885
>gi|189240234|ref|XP_968546.2| PREDICTED: similar to AGAP007114-PA [Tribolium castaneum]
Length = 880
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CP+C +F++ P L CGHT+CK C+ L
Sbjct: 10 EFLSCPVCCNAFDVALRSPISLGCGHTVCKACLSNL 45
>gi|332848427|ref|XP_003315644.1| PREDICTED: RING finger protein 222 [Pan troglodytes]
gi|397494520|ref|XP_003818123.1| PREDICTED: RING finger protein 222 [Pan paniscus]
Length = 220
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|47228165|emb|CAF97794.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L+C IC+ FN+ P VL C H LC C+L LQ L P + CP+C
Sbjct: 19 EELDCKICYRWFNLGGRRPKVLACCHRLCSRCLLKLQ-------DLGEAPPGAVVCPFCR 71
>gi|354471506|ref|XP_003497983.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Cricetulus
griseus]
gi|344236773|gb|EGV92876.1| RING finger protein 182 [Cricetulus griseus]
Length = 247
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ ++ V + VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEEPVETQVSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|76611199|ref|XP_602690.2| PREDICTED: RING finger protein 222 [Bos taurus]
gi|297486792|ref|XP_002695919.1| PREDICTED: RING finger protein 222 [Bos taurus]
gi|296476675|tpg|DAA18790.1| TPA: ring finger protein 222-like [Bos taurus]
Length = 211
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRELQGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|301612587|ref|XP_002935797.1| PREDICTED: tripartite motif-containing protein 13-like [Xenopus
(Silurana) tropicalis]
gi|384952209|sp|F6ZQ54.1|TRI13_XENTR RecName: Full=Tripartite motif containing 13
Length = 408
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 53/140 (37%), Gaps = 32/140 (22%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILG--------LQWAVVKFPTLPVQLP 92
EE L CPIC F+ P VL C H CK C+ G +QW P
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLDGVLEENSRTMQWR-----------P 49
Query: 93 LFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED--RQPAS-- 148
CP C + + G + NY L +VE N +V C++ QP +
Sbjct: 50 SSFKCPTCRKETPTMGVNG----LQVNYLLKGIVEKYNKIKVSPKMPVCKEHSDQPLNIF 105
Query: 149 -SSSGSSTFGNQLNRGNHRR 167
S+ G+ G H++
Sbjct: 106 CSTDLKLICGSCATTGEHKK 125
>gi|335774974|gb|AEH58418.1| tripartite motif-containing protein 59-like protein [Equus
caballus]
Length = 403
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|426356494|ref|XP_004045601.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
TRIM50 [Gorilla gorilla gorilla]
Length = 488
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
S++ E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SLLELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|348566009|ref|XP_003468795.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Cavia
porcellus]
Length = 247
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D + VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQLPEDPAEAQVSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKILDFG 55
Query: 86 TLPVQLPLFISCPWCN 101
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFCR 68
>gi|296197375|ref|XP_002746254.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Callithrix jacchus]
Length = 247
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S S E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDTAESQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|426384094|ref|XP_004058611.1| PREDICTED: RING finger protein 222 [Gorilla gorilla gorilla]
Length = 220
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|268571511|ref|XP_002641068.1| Hypothetical protein CBG22485 [Caenorhabditis briggsae]
Length = 837
Score = 40.8 bits (94), Expect = 0.53, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 150 SSGSSTFGNQLNRGNHRRGQHHHHYHHHPE 179
S GSS+F +Q R N+++G HH Y HHP+
Sbjct: 471 SGGSSSFKHQNPRHNYQKGGHHSQYQHHPD 500
>gi|240254615|ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing
protein [Arabidopsis thaliana]
gi|330254782|gb|AEC09876.1| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing
protein [Arabidopsis thaliana]
Length = 1664
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ ++ + +++ R+E+ CPIC E ++ N V CGH+ C NC +A+ +
Sbjct: 1326 ASDPAEQESENLLKRDEA--CPICHE---ILRNQKMVFQCGHSTCCNCF----FAMTERK 1376
Query: 86 TLPVQLPLFISCPWC 100
++ L ++ CP C
Sbjct: 1377 SVQETLQKWVMCPIC 1391
>gi|17563664|ref|NP_506687.1| Protein T01C3.3 [Caenorhabditis elegans]
gi|3879246|emb|CAB01659.1| Protein T01C3.3 [Caenorhabditis elegans]
Length = 202
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCI 74
EC +C++ F+ +P V+ CGHTLC CI
Sbjct: 132 ECLVCYQKFDENTRIPRVMDCGHTLCDFCI 161
>gi|403331374|gb|EJY64632.1| Zinc finger, C3HC4 type family protein [Oxytricha trifallax]
Length = 800
Score = 40.8 bits (94), Expect = 0.54, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 33 DVSSVV---SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
DV +V+ + + ++CPIC E+ N++ P + CGH LC C+ LQ+ +
Sbjct: 231 DVVTVIFNMTNADDVQCPICLENLNLMV-APKITKCGHILCWPCV--LQYLAFE------ 281
Query: 90 QLPLFISCPWCNLLSFRVVYKGNLK 114
++ + CP CN +YK LK
Sbjct: 282 RVNNWKRCPLCN----ESIYKHELK 302
>gi|340729837|ref|XP_003403201.1| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Bombus
terrestris]
Length = 558
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 40 REESLECPICWESFNMVE-NVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
R LEC +C E F + VP +L CGHT+C +C+L L+ P + Q F+ CP
Sbjct: 21 RTNVLECRVCEEVFTVDGIKVPRLLHCGHTVCHSCLLRLR------PCMTDQ--QFLLCP 72
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ + + + N+ +KN+ L+ ++E +
Sbjct: 73 FDRQPT--SISQNNVCNLKKNFALIELLERLE 102
>gi|149059623|gb|EDM10561.1| rCG55211, isoform CRA_a [Rattus norvegicus]
gi|149059624|gb|EDM10562.1| rCG55211, isoform CRA_a [Rattus norvegicus]
Length = 209
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
D +S +E ECP+CW FN + P VL C H+ C C+
Sbjct: 17 DQRMSEPQVQELKAECPVCWNPFNNTFHTPKVLDCCHSFCVECL 60
>gi|308505564|ref|XP_003114965.1| hypothetical protein CRE_28355 [Caenorhabditis remanei]
gi|308259147|gb|EFP03100.1| hypothetical protein CRE_28355 [Caenorhabditis remanei]
Length = 452
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCI 74
CPIC E F+ + P VL CGH+ C +CI
Sbjct: 25 CPICMEVFDTTSHTPKVLECGHSFCMSCI 53
>gi|410971065|ref|XP_003991994.1| PREDICTED: tripartite motif-containing protein 59 [Felis catus]
Length = 403
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFE----DPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|291405066|ref|XP_002719039.1| PREDICTED: ring finger protein 222-like [Oryctolagus cuniculus]
Length = 220
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLDGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|22749455|ref|NP_689950.1| E3 ubiquitin-protein ligase RNF182 [Homo sapiens]
gi|259013541|ref|NP_001158504.1| E3 ubiquitin-protein ligase RNF182 [Homo sapiens]
gi|259013543|ref|NP_001158505.1| E3 ubiquitin-protein ligase RNF182 [Homo sapiens]
gi|259013545|ref|NP_001158506.1| E3 ubiquitin-protein ligase RNF182 [Homo sapiens]
gi|55626010|ref|XP_527238.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Pan
troglodytes]
gi|114605567|ref|XP_001169582.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Pan
troglodytes]
gi|332822974|ref|XP_003311075.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Pan troglodytes]
gi|397505309|ref|XP_003823211.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Pan
paniscus]
gi|397505311|ref|XP_003823212.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Pan
paniscus]
gi|397505313|ref|XP_003823213.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 3 [Pan
paniscus]
gi|403270872|ref|XP_003927380.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403270874|ref|XP_003927381.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Saimiri
boliviensis boliviensis]
gi|410040278|ref|XP_003950776.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Pan troglodytes]
gi|426351654|ref|XP_004043346.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Gorilla
gorilla gorilla]
gi|426351656|ref|XP_004043347.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Gorilla
gorilla gorilla]
gi|426351658|ref|XP_004043348.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 3 [Gorilla
gorilla gorilla]
gi|426351660|ref|XP_004043349.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 4 [Gorilla
gorilla gorilla]
gi|74751050|sp|Q8N6D2.1|RN182_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|21040537|gb|AAH30666.1| Ring finger protein 182 [Homo sapiens]
gi|29477067|gb|AAH50030.1| RNF182 protein [Homo sapiens]
gi|119575753|gb|EAW55349.1| ring finger protein 182, isoform CRA_a [Homo sapiens]
gi|119575754|gb|EAW55350.1| ring finger protein 182, isoform CRA_a [Homo sapiens]
gi|123983246|gb|ABM83364.1| ring finger protein 182 [synthetic construct]
gi|123983258|gb|ABM83370.1| ring finger protein 182 [synthetic construct]
gi|123997945|gb|ABM86574.1| ring finger protein 182 [synthetic construct]
gi|123997947|gb|ABM86575.1| ring finger protein 182 [synthetic construct]
gi|189054925|dbj|BAG37909.1| unnamed protein product [Homo sapiens]
gi|208968733|dbj|BAG74205.1| ring finger protein 182 [synthetic construct]
gi|410214226|gb|JAA04332.1| ring finger protein 182 [Pan troglodytes]
gi|410265344|gb|JAA20638.1| ring finger protein 182 [Pan troglodytes]
gi|410355747|gb|JAA44477.1| ring finger protein 182 [Pan troglodytes]
Length = 247
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S S E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDTAESQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|449277291|gb|EMC85526.1| Intraflagellar transport protein 80 like protein, partial [Columba
livia]
Length = 939
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L C IC+ F P VL C HT C+NC+ G+ F P+++PL CP
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRNCLEGVIHLSSNFSIWRPLRVPL--KCPT 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|348568674|ref|XP_003470123.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like [Cavia
porcellus]
Length = 490
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+SV ++ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 5 ASVPELQDQLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|17538069|ref|NP_494240.1| Protein ZK1240.6 [Caenorhabditis elegans]
gi|351065653|emb|CCD61647.1| Protein ZK1240.6 [Caenorhabditis elegans]
Length = 128
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 45 ECPICWESFNMVEN--VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
EC +C E+++ V+ VP VL CGH++C++C + L L +CP +
Sbjct: 5 ECKVCNENYSDVDESHVPRVLTCGHSICQSCAA---------KQMSNSLILCKTCPEETI 55
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGD---RVKSHS 138
R G+++ +KN+ L+ +E D + K H
Sbjct: 56 TKVR---DGDVRNLQKNFGLMQTIEMFQQDLPLKCKEHQ 91
>gi|390363625|ref|XP_788915.3| PREDICTED: cell division cycle 5-like protein-like
[Strongylocentrotus purpuratus]
Length = 1199
Score = 40.8 bits (94), Expect = 0.57, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 11 GNVGLKNDSLKASEAASECSD---DDVSSVVSREESLECPICWESFNMVENVPYVLWCGH 67
N+ K D ++++E E + D +V++ +SLECP+C +F P +L C H
Sbjct: 684 ANMASKKDRIESAEKKLERNRIMADAFKNVIA--QSLECPVCLNTFTD----PKILSCSH 737
Query: 68 TLCKNCILGL 77
T CK C+ L
Sbjct: 738 TYCKACLNNL 747
>gi|297715812|ref|XP_002834252.1| PREDICTED: RING finger protein 222-like [Pongo abelii]
Length = 220
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|21748764|dbj|BAC03481.1| unnamed protein product [Homo sapiens]
Length = 247
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S S E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDTAESQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|449507892|ref|XP_002192780.2| PREDICTED: roquin [Taeniopygia guttata]
Length = 1124
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|449275847|gb|EMC84604.1| Roquin [Columba livia]
Length = 1124
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|73960582|ref|XP_537186.2| PREDICTED: roquin isoform 1 [Canis lupus familiaris]
Length = 1132
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|73960580|ref|XP_861415.1| PREDICTED: roquin isoform 5 [Canis lupus familiaris]
Length = 1123
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|392352773|ref|XP_001057889.3| PREDICTED: roquin-like [Rattus norvegicus]
Length = 980
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|363736400|ref|XP_001234605.2| PREDICTED: LOW QUALITY PROTEIN: roquin [Gallus gallus]
Length = 1135
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|326924738|ref|XP_003208582.1| PREDICTED: roquin-like [Meleagris gallopavo]
Length = 1008
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|307185948|gb|EFN71750.1| Roquin [Camponotus floridanus]
Length = 991
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
E L CPIC F+ P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPICCHDFDAAIRGPISLGCGHTICRACLANLH 46
>gi|358416148|ref|XP_003583308.1| PREDICTED: roquin [Bos taurus]
Length = 1104
Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|17538071|ref|NP_494242.1| Protein ZK1240.8 [Caenorhabditis elegans]
gi|351065654|emb|CCD61648.1| Protein ZK1240.8 [Caenorhabditis elegans]
Length = 292
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 45 ECPICWESFNMVEN--VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP-WCN 101
EC +C E ++ ++ P VL CGH++C+NC + L V I CP C+
Sbjct: 5 ECEVCNEDYSNLDESRAPRVLKCGHSICQNCAVKLISNSV------------ILCPKKCS 52
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVESMNG 131
+ V GN++ +KN+ L+ +E M
Sbjct: 53 ETT--EVQNGNVESLQKNFGLMQAMEMMEA 80
>gi|308461583|ref|XP_003093082.1| hypothetical protein CRE_10662 [Caenorhabditis remanei]
gi|308250808|gb|EFO94760.1| hypothetical protein CRE_10662 [Caenorhabditis remanei]
Length = 366
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 23/100 (23%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
D S + EE+L C +C ++M + P L CGH C+ CI G +++
Sbjct: 288 DTRQSKIEKLEEALICTVC---YDMFKEEPRTLDCGHVFCEECIRGFNSPIIR------- 337
Query: 91 LPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN 130
CP C R V + P NY L ++E M
Sbjct: 338 ------CPMC-----RKVVDATVVTP--NYVLKRVLEVMK 364
>gi|71980573|ref|NP_491738.2| Protein RNF-1 [Caenorhabditis elegans]
gi|351065261|emb|CCD61221.1| Protein RNF-1 [Caenorhabditis elegans]
Length = 381
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
+C +C++ FN + L CGHT C CI +Q + P + CP C
Sbjct: 21 QCQVCYQPFNETTKLARSLHCGHTFCTECIRNVQ----NYGNSP-----HLECPTC---- 67
Query: 105 FRVVYKGNLKFPRKNYFLLWMV 126
R K N++ N+ ++ +
Sbjct: 68 -RAETKSNIENVAPNFSIMELA 88
>gi|226442736|ref|NP_001140156.1| RING finger protein 222 [Homo sapiens]
gi|182705199|sp|A6NCQ9.1|RN222_HUMAN RecName: Full=RING finger protein 222
Length = 220
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ + CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTLVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|308480171|ref|XP_003102293.1| hypothetical protein CRE_05892 [Caenorhabditis remanei]
gi|308262219|gb|EFP06172.1| hypothetical protein CRE_05892 [Caenorhabditis remanei]
Length = 259
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 14/63 (22%)
Query: 44 LECPICWESFNMV--ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
EC IC + F + P VL CGHT+C +C+ LQ ++CP+C
Sbjct: 192 FECEICLQQFTDIAGNRAPKVLRCGHTICSSCVNSLQQNNS------------VTCPFCR 239
Query: 102 LLS 104
+++
Sbjct: 240 VVT 242
>gi|281205537|gb|EFA79727.1| hypothetical protein PPL_07418 [Polysphondylium pallidum PN500]
Length = 829
Score = 40.8 bits (94), Expect = 0.60, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 17/60 (28%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E++L CPIC + + P++ CGH+ C CIL VQL SCP C
Sbjct: 159 EDTLSCPICLD----IIKEPFITKCGHSFCYQCIL-------------VQLSKQSSCPLC 201
>gi|270012321|gb|EFA08769.1| hypothetical protein TcasGA2_TC006458 [Tribolium castaneum]
Length = 443
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CP+C +F++ P L CGHT+CK C+ L
Sbjct: 10 EFLSCPVCCNAFDVALRSPISLGCGHTVCKACLSNL 45
>gi|395533442|ref|XP_003768769.1| PREDICTED: RING finger protein 222 [Sarcophilus harrisii]
Length = 211
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSC----KVDGQIQRTIICPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|327270269|ref|XP_003219912.1| PREDICTED: roquin-like [Anolis carolinensis]
Length = 1129
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|440910102|gb|ELR59930.1| Roquin [Bos grunniens mutus]
Length = 1139
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|432097680|gb|ELK27792.1| Roquin [Myotis davidii]
Length = 1123
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|431915178|gb|ELK15865.1| Tripartite motif-containing protein 59 [Pteropus alecto]
Length = 402
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|426239915|ref|XP_004013862.1| PREDICTED: roquin isoform 2 [Ovis aries]
Length = 1124
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|426239913|ref|XP_004013861.1| PREDICTED: roquin isoform 1 [Ovis aries]
Length = 1133
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|350402082|ref|XP_003486362.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Bombus
impatiens]
Length = 558
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 40 REESLECPICWESFNMVE-NVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
R LEC +C E F + VP +L CGHT+C +C+L L+ P + Q F+ CP
Sbjct: 21 RTNVLECRVCEEVFTVDGIKVPRLLHCGHTVCHSCLLRLR------PCMTDQ--QFLLCP 72
Query: 99 WCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ + + + N+ +KN+ L+ ++E +
Sbjct: 73 FDRQPTG--ISQNNVCNLKKNFALIELLERLE 102
>gi|344237190|gb|EGV93293.1| Roquin [Cricetulus griseus]
Length = 1418
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|338724544|ref|XP_003364962.1| PREDICTED: roquin isoform 2 [Equus caballus]
Length = 1122
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|321446627|gb|EFX60904.1| hypothetical protein DAPPUDRAFT_275046 [Daphnia pulex]
Length = 453
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCI---LGLQWAVV-KFPTLPVQLPL 93
C +C +FN EN P L CGH C NC+ L Q+ V +FP + + P+
Sbjct: 15 CLVCTNTFNETENSPRSLPCGHIFCLNCLENFLEYQYGPVDRFPAVRERSPI 66
>gi|194210317|ref|XP_001916523.1| PREDICTED: roquin isoform 1 [Equus caballus]
Length = 1131
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|149636161|ref|XP_001515526.1| PREDICTED: roquin [Ornithorhynchus anatinus]
Length = 1137
Score = 40.8 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|85567227|gb|AAI12155.1| Tripartite motif protein 50A [Homo sapiens]
gi|85567586|gb|AAI12153.1| Tripartite motif protein 50A [Homo sapiens]
gi|119590094|gb|EAW69688.1| hCG1642804, isoform CRA_b [Homo sapiens]
gi|119590097|gb|EAW69691.1| hCG1642804, isoform CRA_b [Homo sapiens]
gi|158257580|dbj|BAF84763.1| unnamed protein product [Homo sapiens]
Length = 487
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 31/115 (26%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E+ L+CPIC E F P +L CGH+ CK C++ +L L + CP C
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLV----------SLSCHLDAELRCPVC 56
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
R G+ P N L ++E++ GD +V H S FCE Q
Sbjct: 57 -----RQAVDGSSSLP--NVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQ 104
>gi|345796488|ref|XP_545257.3| PREDICTED: tripartite motif-containing protein 59 [Canis lupus
familiaris]
Length = 404
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFE----DPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|126309099|ref|XP_001364025.1| PREDICTED: RING finger protein 222-like [Monodelphis domestica]
Length = 218
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSC----KVDGQIQKSIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|126306251|ref|XP_001365320.1| PREDICTED: roquin [Monodelphis domestica]
Length = 1133
Score = 40.8 bits (94), Expect = 0.63, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|350589009|ref|XP_003357594.2| PREDICTED: roquin [Sus scrofa]
Length = 1132
Score = 40.8 bits (94), Expect = 0.63, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|431916005|gb|ELK16259.1| Roquin [Pteropus alecto]
Length = 1125
Score = 40.8 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|403365714|gb|EJY82647.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1211
Score = 40.8 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 44 LECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
++CP C + ++ N+P +L CGHTLC+ CIL + + + I CP C
Sbjct: 1 MQCPQCIQLYHQETNIPRILIGCGHTLCEKCIL----SCFANKSQTNYMKQVIECPECGT 56
Query: 103 LS 104
L+
Sbjct: 57 LN 58
>gi|403365667|gb|EJY82622.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1211
Score = 40.8 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 44 LECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
++CP C + ++ N+P +L CGHTLC+ CIL + + + I CP C
Sbjct: 1 MQCPQCIQLYHQETNIPRILIGCGHTLCEKCIL----SCFANKSQTNYMKQVIECPECGT 56
Query: 103 LS 104
L+
Sbjct: 57 LN 58
>gi|301763166|ref|XP_002916999.1| PREDICTED: roquin-like [Ailuropoda melanoleuca]
gi|281353850|gb|EFB29434.1| hypothetical protein PANDA_005160 [Ailuropoda melanoleuca]
Length = 1132
Score = 40.8 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|119590095|gb|EAW69689.1| hCG1642804, isoform CRA_c [Homo sapiens]
gi|219517998|gb|AAI43788.1| TRIM50 protein [Homo sapiens]
Length = 486
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 31/115 (26%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E+ L+CPIC E F P +L CGH+ CK C++ +L L + CP C
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLV----------SLSCHLDAELRCPVC 56
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
R G+ P N L ++E++ GD +V H S FCE Q
Sbjct: 57 -----RQAVDGSSSLP--NVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQ 104
>gi|118099144|ref|XP_001234238.1| PREDICTED: RING finger protein 224-like [Gallus gallus]
Length = 168
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 17/82 (20%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+ LEC IC+ S+++ +P L+CGHT C+ C+ L + +I CP C
Sbjct: 29 QKLECIICYSSYDLCGRLPRRLYCGHTFCQACLKRLDAVANEQ--------RWIPCPQC- 79
Query: 102 LLSFRVVYKGNLKFPRKNYFLL 123
+ N PR +L
Sbjct: 80 --------RQNTPTPRGGVTML 93
>gi|440794644|gb|ELR15801.1| Bbox zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 597
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Query: 20 LKASEAASECSDDDVSSVVSREESLECPICWESFNMVE--NVPYVLWCGHTLCKNCILGL 77
L S AA+E DDV + C +C+ +F+ E VP +L CGH+ C C+ L
Sbjct: 7 LATSAAAAEEDKDDVGT---------CSVCFLAFSASEADRVPRLLKCGHSFCTACLSHL 57
Query: 78 QWAVVKFPTLPVQLPLF-----ISCPWCN-----LLSFRVVYKGNLKFPRKNYFLLWMVE 127
+ PT + L + CP C LL V G PR N+ L+ ++
Sbjct: 58 LASPTPTPTANSEAELEEATWPLRCPKCRTETRVLLVDGEVAAGVKGLPR-NFDLIDLLS 116
Query: 128 S 128
S
Sbjct: 117 S 117
>gi|198458957|ref|XP_002136127.1| GA28704 [Drosophila pseudoobscura pseudoobscura]
gi|198458961|ref|XP_002136128.1| GA28705 [Drosophila pseudoobscura pseudoobscura]
gi|198142321|gb|EDY71095.1| GA28704 [Drosophila pseudoobscura pseudoobscura]
gi|198142322|gb|EDY71096.1| GA28705 [Drosophila pseudoobscura pseudoobscura]
Length = 209
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 15/64 (23%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE+ CPIC+ES + + P CGH C+ CI V++ F CP C
Sbjct: 151 EETYNCPICFESVSSRD--PVATKCGHVFCRQCI----RTVIR---------RFHKCPVC 195
Query: 101 NLLS 104
+ S
Sbjct: 196 RMRS 199
>gi|395530829|ref|XP_003767489.1| PREDICTED: roquin isoform 1 [Sarcophilus harrisii]
Length = 1134
Score = 40.8 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|351696817|gb|EHA99735.1| Roquin [Heterocephalus glaber]
Length = 1133
Score = 40.8 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|344278501|ref|XP_003411032.1| PREDICTED: roquin [Loxodonta africana]
Length = 1104
Score = 40.8 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|219521558|gb|AAI44409.1| RC3H1 protein [Homo sapiens]
Length = 1124
Score = 40.8 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|441634638|ref|XP_004089859.1| PREDICTED: roquin isoform 4 [Nomascus leucogenys]
Length = 1134
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|441634635|ref|XP_004089858.1| PREDICTED: roquin isoform 3 [Nomascus leucogenys]
Length = 1125
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|441634632|ref|XP_004089857.1| PREDICTED: roquin isoform 2 [Nomascus leucogenys]
Length = 1124
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|73695473|ref|NP_742068.1| probable E3 ubiquitin-protein ligase Roquin [Homo sapiens]
gi|73621450|sp|Q5TC82.1|RC3H1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase Roquin;
AltName: Full=RING finger and C3H zinc finger protein
1; AltName: Full=RING finger protein 198
Length = 1133
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|402858275|ref|XP_003893639.1| PREDICTED: roquin isoform 2 [Papio anubis]
Length = 1134
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|402858273|ref|XP_003893638.1| PREDICTED: roquin isoform 1 [Papio anubis]
Length = 1125
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|387018230|gb|AFJ51233.1| Roquin-like [Crotalus adamanteus]
Length = 1126
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|395530831|ref|XP_003767490.1| PREDICTED: roquin isoform 2 [Sarcophilus harrisii]
Length = 1124
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|355715888|gb|AES05435.1| ring finger and CCCH-type zinc finger domains 1 [Mustela putorius
furo]
Length = 989
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|355559055|gb|EHH15835.1| hypothetical protein EGK_01986 [Macaca mulatta]
gi|355746203|gb|EHH50828.1| hypothetical protein EGM_01713 [Macaca fascicularis]
gi|383416017|gb|AFH31222.1| roquin [Macaca mulatta]
Length = 1133
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|354470966|ref|XP_003497715.1| PREDICTED: roquin [Cricetulus griseus]
Length = 1128
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|332811232|ref|XP_001151649.2| PREDICTED: roquin isoform 1 [Pan troglodytes]
gi|410217834|gb|JAA06136.1| ring finger and CCCH-type domains 1 [Pan troglodytes]
gi|410259234|gb|JAA17583.1| ring finger and CCCH-type domains 1 [Pan troglodytes]
gi|410303180|gb|JAA30190.1| ring finger and CCCH-type domains 1 [Pan troglodytes]
gi|410337551|gb|JAA37722.1| ring finger and CCCH-type domains 1 [Pan troglodytes]
Length = 1133
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|301603692|ref|XP_002931481.1| PREDICTED: roquin-like [Xenopus (Silurana) tropicalis]
Length = 1123
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|297662686|ref|XP_002809831.1| PREDICTED: roquin [Pongo abelii]
Length = 1112
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|223460896|gb|AAI36785.1| Ring finger and CCCH-type zinc finger domains 1 [Homo sapiens]
Length = 1134
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|194038030|ref|XP_001928710.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Sus scrofa]
Length = 247
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S VS E LEC IC+ +N+ + P VL C H +C C+ ++ F
Sbjct: 2 ASQPPEDAAESQVSDE--LECKICYNRYNLKQRKPKVLGCCHRVCAKCL----CKIIDFG 55
Query: 86 TLPVQLPLFISCPWCN 101
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFCR 68
>gi|193783831|dbj|BAG53813.1| unnamed protein product [Homo sapiens]
Length = 1125
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|397508576|ref|XP_003824728.1| PREDICTED: roquin isoform 2 [Pan paniscus]
Length = 1134
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|397508574|ref|XP_003824727.1| PREDICTED: roquin isoform 1 [Pan paniscus]
Length = 1125
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|119611378|gb|EAW90972.1| ring finger and CCCH-type zinc finger domains 1 [Homo sapiens]
Length = 955
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|293341411|ref|XP_002724928.1| PREDICTED: roquin-like [Rattus norvegicus]
Length = 1130
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|109019566|ref|XP_001102837.1| PREDICTED: roquin isoform 2 [Macaca mulatta]
Length = 1125
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|109019564|ref|XP_001102746.1| PREDICTED: roquin isoform 1 [Macaca mulatta]
Length = 1134
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|390477095|ref|XP_002760397.2| PREDICTED: roquin isoform 4 [Callithrix jacchus]
Length = 1124
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|348577835|ref|XP_003474689.1| PREDICTED: LOW QUALITY PROTEIN: roquin-like [Cavia porcellus]
Length = 1134
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|332219622|ref|XP_003258953.1| PREDICTED: roquin isoform 1 [Nomascus leucogenys]
Length = 1133
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|50511255|dbj|BAD32613.1| mKIAA2025 protein [Mus musculus]
Length = 1136
Score = 40.8 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 18 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 58
>gi|341893707|gb|EGT49642.1| hypothetical protein CAEBREN_14529 [Caenorhabditis brenneri]
Length = 586
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E LECPIC+ ++ +++P +L CGHT C C+
Sbjct: 478 ECLECPICYRTY---KDIPRILHCGHTFCFECL 507
>gi|388454462|ref|NP_001253109.1| ring finger protein 182 [Macaca mulatta]
gi|402865866|ref|XP_003897125.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Papio
anubis]
gi|402865868|ref|XP_003897126.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 2 [Papio
anubis]
gi|402865870|ref|XP_003897127.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 3 [Papio
anubis]
gi|402865872|ref|XP_003897128.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 4 [Papio
anubis]
gi|402865874|ref|XP_003897129.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 5 [Papio
anubis]
gi|355561333|gb|EHH17965.1| E3 ubiquitin-protein ligase RNF182 [Macaca mulatta]
gi|355748244|gb|EHH52727.1| E3 ubiquitin-protein ligase RNF182 [Macaca fascicularis]
gi|380784933|gb|AFE64342.1| E3 ubiquitin-protein ligase RNF182 [Macaca mulatta]
Length = 247
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S S E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDPAESQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|198459948|ref|XP_002136030.1| GA23991 [Drosophila pseudoobscura pseudoobscura]
gi|198140180|gb|EDY70969.1| GA23991 [Drosophila pseudoobscura pseudoobscura]
Length = 209
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 15/64 (23%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE+ CPIC+ES + + P CGH C+ CI V++ F CP C
Sbjct: 151 EETYNCPICFESVSSRD--PVATKCGHVFCRQCI----RTVIRR---------FHKCPVC 195
Query: 101 NLLS 104
+ S
Sbjct: 196 RMRS 199
>gi|68131569|ref|NP_001020123.1| probable E3 ubiquitin-protein ligase Roquin [Mus musculus]
gi|73621451|sp|Q4VGL6.1|RC3H1_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase Roquin;
AltName: Full=Protein Sanroque; AltName: Full=RING
finger and C3H zinc finger protein 1
gi|62836626|gb|AAY16368.1| roquin [Mus musculus]
gi|157170428|gb|AAI52932.1| RING CCCH (C3H) domains 1 [synthetic construct]
gi|187954319|gb|AAI38664.1| RING CCCH (C3H) domains 1 [Mus musculus]
Length = 1130
Score = 40.4 bits (93), Expect = 0.68, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|410906987|ref|XP_003966973.1| PREDICTED: RING finger protein 186-like [Takifugu rubripes]
Length = 118
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC-N 101
LEC +C+ +FN P L C H+ C++C+L L + P I+CP C N
Sbjct: 4 DLECGVCYRTFNAGRRCPRELRCHHSFCESCLLLLSRTQGSE-----EGPRSITCPLCRN 58
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSG 139
S + + L +V + DR + G
Sbjct: 59 TTSISAEARVRAELRVDEAVLERLVAAGVLDREEEEHG 96
>gi|403348761|gb|EJY73824.1| hypothetical protein OXYTRI_04923 [Oxytricha trifallax]
Length = 427
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
L C C + +N P + CGH +C+ C + +K Q P+ +SC +
Sbjct: 2 LTCKACKKIYNTTTRQPQFMTCGHPICQQCFTQYEQQALKIQDEKYQCPIKVSCQQTQI 60
>gi|159112503|ref|XP_001706480.1| Hypothetical protein GL50803_17329 [Giardia lamblia ATCC 50803]
gi|157434577|gb|EDO78806.1| hypothetical protein GL50803_17329 [Giardia lamblia ATCC 50803]
Length = 374
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E LECP C +FN P L CGHT CK C+ + K
Sbjct: 2 ELLECPACNRTFN----APITLKCGHTFCKGCLSSKRQKACKI 40
>gi|118100004|ref|XP_415709.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Gallus gallus]
Length = 492
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
S+ + E+ L CPIC E F P +L CGH+ CK+C+L L
Sbjct: 6 SIDNLEDQLLCPICLEVFKE----PLMLQCGHSYCKSCVLSL 43
>gi|147907152|ref|NP_001084548.1| probable E3 ubiquitin-protein ligase Roquin [Xenopus laevis]
gi|73621452|sp|Q6NUC6.1|RC3H1_XENLA RecName: Full=Probable E3 ubiquitin-protein ligase Roquin;
AltName: Full=RING finger and C3H zinc finger protein 1
gi|46250192|gb|AAH68669.1| MGC81061 protein [Xenopus laevis]
Length = 1114
Score = 40.4 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|417405922|gb|JAA49651.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 1119
Score = 40.4 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|213406075|ref|XP_002173809.1| zf-C3HC4 type zinc finger [Schizosaccharomyces japonicus yFS275]
gi|212001856|gb|EEB07516.1| zf-C3HC4 type zinc finger [Schizosaccharomyces japonicus yFS275]
Length = 524
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTL-----PVQLPLFIS- 96
++ECPIC+ + N Y CG +C C + ++ A PT+ P + IS
Sbjct: 148 AVECPICFLFY--PPNFNYTRCCGQPICSECFVEIKRADPHLPTVHVNEAPPRETDLISE 205
Query: 97 ---CPWCNLLSFRVVYK 110
CP+C F +VYK
Sbjct: 206 PACCPYCMTERFGIVYK 222
>gi|390342768|ref|XP_003725733.1| PREDICTED: E3 ubiquitin-protein ligase TRIM56-like
[Strongylocentrotus purpuratus]
Length = 379
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAV---VKFPTLPVQLPL 93
LEC IC +SF P VL C HT C++C+L + V V PT Q PL
Sbjct: 14 LECQICLDSFRR----PKVLQCLHTFCQDCLLRMAPTVQDTVVCPTCREQTPL 62
>gi|198477762|ref|XP_002136453.1| GA28682 [Drosophila pseudoobscura pseudoobscura]
gi|198145219|gb|EDY71923.1| GA28682 [Drosophila pseudoobscura pseudoobscura]
Length = 138
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 15/64 (23%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE+ CPIC+ES + + P CGH C+ CI + + F CP C
Sbjct: 80 EETYNCPICFESVSSRD--PVATKCGHVFCRQCIRTV-------------IRRFHKCPVC 124
Query: 101 NLLS 104
+ S
Sbjct: 125 RMRS 128
>gi|26390229|dbj|BAC25864.1| unnamed protein product [Mus musculus]
Length = 211
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPMCYEKFRDLDGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYVT 68
Query: 105 F 105
F
Sbjct: 69 F 69
>gi|452825441|gb|EME32438.1| SNF2 domain-containing protein [Galdieria sulphuraria]
Length = 939
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 22 ASEAASECSDDDVSSVV-------SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+ A S S + +S+VV S+ ++LECPIC +MV++ CGH CK C+
Sbjct: 647 SDNANSSQSSEYLSTVVERLKETFSKGDNLECPIC---LDMVDDGVMFCSCGHVTCKECV 703
Query: 75 LGLQWAVVKFPTLPVQLPLFISCPWCNL 102
L + + + T+P CP C +
Sbjct: 704 LAM---LQRRNTIP--------CPLCRV 720
>gi|431907787|gb|ELK11394.1| GTP-binding protein ARD-1 [Pteropus alecto]
Length = 646
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSG 139
+V G+ +KN+ LL ++E + + + G
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGG 112
>gi|426332788|ref|XP_004027976.1| PREDICTED: roquin [Gorilla gorilla gorilla]
Length = 1082
Score = 40.4 bits (93), Expect = 0.73, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|395825278|ref|XP_003785864.1| PREDICTED: roquin [Otolemur garnettii]
Length = 1036
Score = 40.4 bits (93), Expect = 0.73, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CPIC ++F+ P L CGHT+CK C+
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCL 42
>gi|301627586|ref|XP_002942955.1| PREDICTED: hypothetical protein LOC100497669 [Xenopus (Silurana)
tropicalis]
Length = 174
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 17/80 (21%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
++C IC+ S+N+ +P L+CGHT C+ C+ L + +I CP C
Sbjct: 40 IDCIICFSSYNLTHRLPRRLYCGHTFCQACLRRLDTLTNEQ--------RWIPCPQC--- 88
Query: 104 SFRVVYKGNLKFPRKNYFLL 123
+ N PR +L
Sbjct: 89 ------RQNTPTPRGGVAML 102
>gi|395506601|ref|XP_003757620.1| PREDICTED: RING finger protein 224 [Sarcophilus harrisii]
Length = 165
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 30/120 (25%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC---- 100
+C IC+ S+++ +P L+CGHT C+ C+ L P +I CP C
Sbjct: 28 DCIICYSSYDLAGRLPRRLYCGHTFCQACVRRLD--------TPAHEQRWIPCPQCRQST 79
Query: 101 ------------NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPAS 148
+L +F V K + PR W S G K S + QPAS
Sbjct: 80 PTPRGGVAMLDLDLAAFLAV-KAEREPPRGEP---WPPTSHKGSAPKPSSAITQ--QPAS 133
>gi|405969111|gb|EKC34117.1| hypothetical protein CGI_10014955 [Crassostrea gigas]
Length = 1363
Score = 40.4 bits (93), Expect = 0.75, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
+ CPIC F+ + VP +L C HT+C CI + + P+ I CP C
Sbjct: 864 ISCPICAYQFSTPDKVPKLLPCYHTICSPCIDSI------IASTPLNSDSTIKCPIC 914
>gi|348535369|ref|XP_003455173.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Oreochromis
niloticus]
Length = 588
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 27/107 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL + CP+
Sbjct: 43 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAVRCPF 88
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESM-NGDRVKSHSGFCED 143
+V G+ +KN+ LL ++E + NG + SG ED
Sbjct: 89 ----DRQVTELGDSGVWGLKKNFALLELLERLQNG--ATNQSGMAED 129
>gi|432884694|ref|XP_004074544.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Oryzias
latipes]
Length = 578
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 27/107 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL + CP+
Sbjct: 33 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAVRCPF 78
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESM-NGDRVKSHSGFCED 143
+V G+ +KN+ LL ++E + NG + SG ED
Sbjct: 79 ----DRQVTELGDSGVWGLKKNFALLELLERLQNG--ATNQSGMSED 119
>gi|47228275|emb|CAG07670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 983
Score = 40.4 bits (93), Expect = 0.75, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV-----QLPL 93
E L CPIC ++F P L CGHT+CK C+ L F + QLP+
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTDIEQLPV 66
>gi|327266648|ref|XP_003218116.1| PREDICTED: e3 ubiquitin-protein ligase TRIM41-like [Anolis
carolinensis]
Length = 488
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L CPIC E F P +L CGH C++C L W + SCP C
Sbjct: 12 EELSCPICLEYFKE----PVILSCGHNFCQSC-LDQYWEEKE-----------ASCPQCR 55
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQ 145
V G+++ R+ ++ +V+ + + + C+ Q
Sbjct: 56 ----EKVQGGDIRPNRQLANVVELVKELGSQKAEEKGRVCQRHQ 95
>gi|296192250|ref|XP_002743978.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Callithrix jacchus]
Length = 487
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 31/120 (25%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S+ E+ L+CPIC E F P +L CGH+ CK+C++ +L L +
Sbjct: 6 SLPELEDRLQCPICLEVFKE----PLMLQCGHSYCKSCLV----------SLSCHLDAEL 51
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
CP C R G+ P N L ++E++ GD +V H S FCE Q
Sbjct: 52 RCPVC-----RQAVDGSSSLP--NVSLARVIEALRLPGDPEPKVCMHHQNPLSLFCEKDQ 104
>gi|198462832|ref|XP_001352572.2| GA14160 [Drosophila pseudoobscura pseudoobscura]
gi|198151000|gb|EAL30069.2| GA14160 [Drosophila pseudoobscura pseudoobscura]
Length = 848
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICGNEFAASQRFPISLGCGHTICKLCLTTL 45
>gi|355726134|gb|AES08775.1| tripartite motif-containing 59 [Mustela putorius furo]
Length = 320
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFE----DPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|308455508|ref|XP_003090285.1| hypothetical protein CRE_10721 [Caenorhabditis remanei]
gi|308264899|gb|EFP08852.1| hypothetical protein CRE_10721 [Caenorhabditis remanei]
Length = 323
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 10 AGNVGLKND--SLKASEAASECSDDDVSSVVSREESLECPICWESFN--MVENVPYVLW- 64
G VG + S + D+ S + E EC IC ++ + ++ P +L
Sbjct: 212 TGEVGTMRELRSFDGDGVSYTSVDETGESALMSETGAECEICLMKYDGAVEKHTPRILIK 271
Query: 65 CGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLW 124
CGHT+C+ CI L L + CP+C ++ VV G++ KNY +L
Sbjct: 272 CGHTMCQGCIGNL---------LEYNSHQEVCCPFCQQVT--VVNGGSVSHLPKNYGMLK 320
Query: 125 MVE 127
++
Sbjct: 321 LIR 323
>gi|195168185|ref|XP_002024912.1| GL18000 [Drosophila persimilis]
gi|194108342|gb|EDW30385.1| GL18000 [Drosophila persimilis]
Length = 848
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICGNEFAASQRFPISLGCGHTICKLCLTTL 45
>gi|449433265|ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Cucumis sativus]
gi|449523563|ref|XP_004168793.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Cucumis sativus]
Length = 1113
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
+DV + R E+ ECPIC E + P C H +C+ C+L W P+
Sbjct: 862 EDVVECIRRGENTECPICLEFADDAVLTP----CAHRMCRECLLS-SWRTPTCGFCPICR 916
Query: 92 PL-----FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ I+CP + FRV + N K K LL +E +N
Sbjct: 917 QMLRKTELITCP--SESPFRVDVEKNWKESSKVSKLLECLERIN 958
>gi|351705363|gb|EHB08282.1| E3 ubiquitin-protein ligase TRIM50 [Heterocephalus glaber]
Length = 451
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV ++ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELQDQLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|329664640|ref|NP_001193185.1| E3 ubiquitin-protein ligase TRIM50 [Bos taurus]
gi|296473068|tpg|DAA15183.1| TPA: tripartite motif protein 50A-like [Bos taurus]
Length = 487
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CP+C E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELEDRLQCPMCLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|114614087|ref|XP_001154917.1| PREDICTED: tripartite motif-containing protein 73 isoform 2 [Pan
troglodytes]
Length = 250
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 14/60 (23%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E+ L+CPIC E F P +L CGH+ CK C++ L + L + CP C
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSLSY----------HLDAELRCPVC 56
>gi|440908450|gb|ELR58464.1| E3 ubiquitin-protein ligase TRIM50 [Bos grunniens mutus]
Length = 487
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CP+C E F P +L CGH+ CK C++ L
Sbjct: 6 SVPELEDRLQCPMCLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|410924271|ref|XP_003975605.1| PREDICTED: LOW QUALITY PROTEIN: roquin-like [Takifugu rubripes]
Length = 1123
Score = 40.4 bits (93), Expect = 0.79, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV-----QLPL 93
E L CPIC ++F P L CGHT+CK C+ L F + QLP+
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTDIEQLPV 66
>gi|156095169|ref|XP_001613620.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802494|gb|EDL43893.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1796
Score = 40.4 bits (93), Expect = 0.79, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
D+S S CPI + + EN PYVL CGH +CK+C+
Sbjct: 1725 DLSGCFFFHSSFTCPISRDKSSK-ENPPYVLRCGHAICKSCV 1765
>gi|126322304|ref|XP_001376868.1| PREDICTED: e3 ubiquitin-protein ligase RNF182-like [Monodelphis
domestica]
Length = 247
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
+D S VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F P
Sbjct: 7 EDTAESPVSDE--LECKICYNRYNLRQRKPKVLECCHRVCAKCL----YKIIDFGDSPQG 60
Query: 91 LPLFISCPWC 100
+ I CP+C
Sbjct: 61 V---IVCPFC 67
>gi|38524612|ref|NP_942150.1| tripartite motif-containing protein 74 [Homo sapiens]
gi|56404879|sp|Q86UV6.1|TRI74_HUMAN RecName: Full=Tripartite motif-containing protein 74; AltName:
Full=Tripartite motif-containing protein 50C
gi|30315007|gb|AAP30736.1| tripartite motif protein TRIM50C [Homo sapiens]
Length = 250
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 31/120 (25%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ E+ L+CPIC E F +L CGH+ CK C++ L + L +
Sbjct: 6 SLLELEDWLQCPICLEVFKE----SLMLQCGHSYCKGCLVSLSY----------HLDTKV 51
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
CP C ++VV G+ P N L W++E++ GD +V H S FCE Q
Sbjct: 52 RCPMC----WQVV-DGSSSLP--NVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQ 104
>gi|363739076|ref|XP_414478.3| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25 [Gallus gallus]
Length = 404
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
+ ++V + S E+ L C IC ++ +N P L CGH+ CK C V K +
Sbjct: 4 AKEEVRASSSLEDELTCSIC---LSLYKN-PVSLCCGHSFCKQC-------VQKVLSNQQ 52
Query: 90 QLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPA 147
Q SCP C V G + + N+ L +VE+ ++ K GF ++ A
Sbjct: 53 QAKASYSCPLCR------VDLGPILELQNNFHLCSIVETYLANKGKKDKGFATKKEEA 104
>gi|327290122|ref|XP_003229773.1| PREDICTED: RING finger protein 183-like [Anolis carolinensis]
Length = 184
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
ECPICW F+ P +L C HT C C+ L +L P + CP C
Sbjct: 12 ECPICWSPFDNAFRTPKLLRCRHTFCIECLAHL--------SLVASDPHCLQCPLCR 60
>gi|242033517|ref|XP_002464153.1| hypothetical protein SORBIDRAFT_01g013190 [Sorghum bicolor]
gi|241918007|gb|EER91151.1| hypothetical protein SORBIDRAFT_01g013190 [Sorghum bicolor]
Length = 231
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 34 VSSVVSREESLECPICWES-FNMVENVPYVLWCGHTLCKNCILG 76
+S + E SL CPIC ++ FN PY L CGH CK+C G
Sbjct: 119 ISETLKYEYSLTCPICLDTLFN-----PYALSCGHLFCKSCACG 157
>gi|154303896|ref|XP_001552354.1| hypothetical protein BC1G_08832 [Botryotinia fuckeliana B05.10]
Length = 612
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
D VS +++ + EC IC+++ N ++ CGH C +C++ L +
Sbjct: 219 DVVSRLLAADGGFECNICYDA---TPNPSIIIPCGHDNCHDCLMALSEQAKQAARGDEDG 275
Query: 92 PLFISCPWC-------NLLSFRVVYKGNLKFP 116
+ CP C NL+ +R+ K ++ P
Sbjct: 276 ATALKCPSCRGKLDMANLIDYRIFKKAHIPSP 307
>gi|395511938|ref|XP_003760207.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Sarcophilus
harrisii]
Length = 247
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
S+ +D S VS E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 TSQPPEDAAESPVSDE--LECKICYNRYNLRQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|332021111|gb|EGI61498.1| GTP-binding protein ARD-1 [Acromyrmex echinatior]
Length = 546
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 44 LECPICWESFNMVE-NVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
LEC +C E F + VP +L CGHT+C +C+L L+ + + F+ CP+
Sbjct: 25 LECRVCEEVFTVDGVKVPRLLHCGHTVCHSCLLRLRTCMSE--------QQFLLCPFDRQ 76
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ +++ ++ +KN+ L+ ++E +
Sbjct: 77 PT--AIHENSIYSLKKNFALIELLERLE 102
>gi|395506163|ref|XP_003757405.1| PREDICTED: RING finger protein 183 [Sarcophilus harrisii]
Length = 190
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E ECP+CW SFN P +L C H+ C C+ L
Sbjct: 8 EPEAECPVCWNSFNNTFRTPKLLDCRHSFCIECLAHL 44
>gi|432095441|gb|ELK26640.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Myotis davidii]
Length = 1418
Score = 40.4 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E L CPIC+ F+ + P L C HT+CK C+
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCL 42
>gi|348524610|ref|XP_003449816.1| PREDICTED: tripartite motif-containing protein 39-like [Oreochromis
niloticus]
Length = 543
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 22/110 (20%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E+ C IC E F P + CGH CKNCI W + P+ + +F S P
Sbjct: 8 EDQFLCSICLEVFTD----PVTIPCGHNFCKNCITE-NWNISVCCQCPLCVKVFHSRPEL 62
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSS 150
N+ N FL MV+ VK SG E+RQ S
Sbjct: 63 NV----------------NTFLSEMVDKFKQSAVKK-SGRSEERQAESGE 95
>gi|198416684|ref|XP_002125601.1| PREDICTED: similar to MGC81061 protein, partial [Ciona
intestinalis]
Length = 348
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT---------LPVQLPLFIS 96
C +C FN + P L CGHT+C+ C+ L+ +F LPV L +
Sbjct: 26 CSVCENEFNRTDRCPISLGCGHTVCRGCLGDLKHPQCQFDQNSITCDISDLPVNSALLLL 85
Query: 97 CPWCNLLSFRVVYKGNLKFPRKNY 120
P V +G + ++N+
Sbjct: 86 VPEEESHKGSVEMRGVSQKGKENF 109
>gi|383853048|ref|XP_003702036.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Megachile rotundata]
Length = 916
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CP+C F++ P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPVCCHDFDVAVRGPISLGCGHTICRTCLANL 45
>gi|432093677|gb|ELK25656.1| E3 ubiquitin-protein ligase RNF182 [Myotis davidii]
Length = 246
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S VS E LEC IC+ +N+ + P VL C H +C C+ ++ F
Sbjct: 2 ASQPPEDAAESQVSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----CKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|348501292|ref|XP_003438204.1| PREDICTED: LOW QUALITY PROTEIN: roquin-like [Oreochromis
niloticus]
Length = 1117
Score = 40.4 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV-----QLPL 93
E L CPIC ++F P L CGHT+CK C+ L F + QLP+
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTDIEQLPV 66
>gi|167963526|ref|NP_001108155.1| roquin [Danio rerio]
Length = 1111
Score = 40.4 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV-----QLPL 93
E L CPIC ++F P L CGHT+CK C+ L F + QLP+
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAINTDIEQLPV 66
>gi|403285740|ref|XP_003934169.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Saimiri
boliviensis boliviensis]
Length = 487
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK+C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKSCLVSL 43
>gi|297677191|ref|XP_002816489.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 1 [Pongo
abelii]
gi|297677195|ref|XP_002816491.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 3 [Pongo
abelii]
gi|297677197|ref|XP_002816492.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 4 [Pongo
abelii]
gi|297677199|ref|XP_002816493.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 isoform 5 [Pongo
abelii]
gi|395736747|ref|XP_003776797.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Pongo abelii]
gi|395736749|ref|XP_003776798.1| PREDICTED: E3 ubiquitin-protein ligase RNF182 [Pongo abelii]
Length = 247
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S S E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPLEDTAESQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|149063052|gb|EDM13375.1| tripartite motif protein 50, isoform CRA_d [Rattus norvegicus]
Length = 255
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 14/66 (21%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
+V ++ L+CPIC E F P +L CGH+ CKNC+ +L L +
Sbjct: 6 TVPELQDQLQCPICLEVFKE----PLMLQCGHSYCKNCL----------DSLSEHLDSEL 51
Query: 96 SCPWCN 101
CP C
Sbjct: 52 RCPVCR 57
>gi|417400295|gb|JAA47102.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 402
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFE----DPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|341895886|gb|EGT51821.1| hypothetical protein CAEBREN_19442 [Caenorhabditis brenneri]
Length = 386
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 40 REESLECPICWESFN--MVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFIS 96
++ESL+C +C F+ + ++P +L CGHT+C NC + +Q L I+
Sbjct: 55 KQESLDCKVCLAPFSDHIPSSLPRILPACGHTICHNCAVTIQKMTFN--------QLAIA 106
Query: 97 CPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS-----GFCED 143
CP+ R V + +N+ +L ++E GD K S CED
Sbjct: 107 CPF-----DRTVTNMKAENLPRNFAILDLIEE-RGDAAKLTSKVNDIKICED 152
>gi|195435912|ref|XP_002065922.1| GK20807 [Drosophila willistoni]
gi|194162007|gb|EDW76908.1| GK20807 [Drosophila willistoni]
Length = 889
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC + F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCKEFAASQRSPISLGCGHTVCKLCLTSL 45
>gi|118358184|ref|XP_001012341.1| Kelch motif family protein [Tetrahymena thermophila]
gi|89294107|gb|EAR92095.1| Kelch motif family protein [Tetrahymena thermophila SB210]
Length = 695
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
+ECP+C+ ++ +++P L CGHT C+ C+ + +Q FI CP C
Sbjct: 1 MECPMCYILYDEKKHIPRNLPCGHTFCELCLQQI-----------LQPKGFIECPSC 46
>gi|30842804|ref|NP_851594.1| E3 ubiquitin-protein ligase TRIM50 [Rattus norvegicus]
gi|56404685|sp|Q810I1.1|TRI50_RAT RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465652|gb|AAL91073.1| tripartite motif protein 50 [Rattus norvegicus]
gi|149063050|gb|EDM13373.1| tripartite motif protein 50, isoform CRA_b [Rattus norvegicus]
Length = 483
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+V ++ L+CPIC E F P +L CGH+ CKNC+ L
Sbjct: 6 TVPELQDQLQCPICLEVFKE----PLMLQCGHSYCKNCLDSL 43
>gi|308486613|ref|XP_003105503.1| hypothetical protein CRE_22441 [Caenorhabditis remanei]
gi|308255469|gb|EFO99421.1| hypothetical protein CRE_22441 [Caenorhabditis remanei]
Length = 155
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ EC +C+ F+ +P V CGHT C+ C GL
Sbjct: 55 EKENECAVCFFPFDSATRIPRVFSCGHTFCEECAQGL 91
>gi|344271473|ref|XP_003407562.1| PREDICTED: RING finger protein 183-like [Loxodonta africana]
Length = 192
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
RE ECP+CW FN + P +L C H+ C C+
Sbjct: 6 GREPEAECPVCWNPFNNTFHTPKMLNCCHSFCVECL 41
>gi|55249660|gb|AAH85684.1| Tripartite motif-containing 50 [Rattus norvegicus]
Length = 484
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+V ++ L+CPIC E F P +L CGH+ CKNC+ L
Sbjct: 6 TVPELQDQLQCPICLEVFKE----PLMLQCGHSYCKNCLDSL 43
>gi|308163023|gb|EFO65388.1| Hypothetical protein GLP15_5022 [Giardia lamblia P15]
Length = 376
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E LECP C +FN P L CGHT CK C+ + K
Sbjct: 2 ELLECPACSRTFN----APITLKCGHTFCKGCLSSKRQKACKI 40
>gi|68074577|ref|XP_679204.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499895|emb|CAH94436.1| conserved hypothetical protein [Plasmodium berghei]
Length = 1189
Score = 40.0 bits (92), Expect = 0.93, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 16 KNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+N SL ++ A E D+S S CPI + + +N+PY+L CGH +CKNC+
Sbjct: 1104 QNSSLISNSLAIEV---DLSGSFFFHSSFTCPISRDKSSK-DNMPYLLTCGHVICKNCV 1158
>gi|341901659|gb|EGT57594.1| hypothetical protein CAEBREN_11009 [Caenorhabditis brenneri]
Length = 221
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
C IC E FN E P VL CGHTLC C G+
Sbjct: 156 CEICMEPFNQ-ERRPKVLKCGHTLCVICCQGM 186
>gi|327289608|ref|XP_003229516.1| PREDICTED: hypothetical protein LOC100552820 [Anolis carolinensis]
Length = 197
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 25 AASECSDDDV----SSVVSREE-SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
+SE SD SS V+R ++C +C+ S+++ +P L+CGHT C+ C+ L
Sbjct: 38 GSSEVSDQSPGTLRSSAVARSSHRVDCIVCFGSYDLSARLPRRLYCGHTFCQACLRRLN- 96
Query: 80 AVVKFPTLPVQLPLFISCPWCN 101
P +I CP C
Sbjct: 97 -------APANEQWWIPCPQCR 111
>gi|390335961|ref|XP_780349.3| PREDICTED: uncharacterized protein LOC574854 [Strongylocentrotus
purpuratus]
Length = 1520
Score = 40.0 bits (92), Expect = 0.95, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
E L CP+C + F+ P L CGHT C+ C+ L F P+
Sbjct: 10 EVLSCPVCCKDFSPSGRQPVSLSCGHTACRMCLSKLHRQQCPFDQTPI 57
>gi|170037291|ref|XP_001846492.1| ubiquitin conjugating enzyme 7 interacting protein [Culex
quinquefasciatus]
gi|167880401|gb|EDS43784.1| ubiquitin conjugating enzyme 7 interacting protein [Culex
quinquefasciatus]
Length = 1746
Score = 40.0 bits (92), Expect = 0.96, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 15 LKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+ +D + E + D + V++ ++ ECPIC+ +F E V + C HT CK C+
Sbjct: 1487 MPDDDTDVTNHYMELVNLDSADVIANVDAFECPICFSAFEQYEGV-VLRDCLHTFCKECL 1545
>gi|55963355|emb|CAI12052.1| novel protein similar to vertebrate SH3 multiple domains 2
(SH3MD2) [Danio rerio]
Length = 843
Score = 40.0 bits (92), Expect = 0.96, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 27 SECSDDDVSSVVSREESL----ECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+E ++ D +SV E +L ECP+C E + V L C HT C+ C+LG+
Sbjct: 2 NEYAEKDCASVKMDESALLDLLECPVCLERLDATAKV---LPCQHTFCRRCLLGI 53
>gi|444707241|gb|ELW48525.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Tupaia chinensis]
Length = 1282
Score = 40.0 bits (92), Expect = 0.97, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|449450716|ref|XP_004143108.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like
[Cucumis sativus]
gi|449508126|ref|XP_004163227.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like
[Cucumis sativus]
Length = 447
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
DD S +S E++ C IC+E + +E V CGH +C C L L PT
Sbjct: 308 DDNLSEISDEDTELCSICFEQASTIE----VQNCGHVMCAQCTLSLCCHSKPNPTTACLT 363
Query: 92 PLFISCPWC 100
P CP+C
Sbjct: 364 PPV--CPFC 370
>gi|29465650|gb|AAL91072.1| tripartite motif protein 50 isoform beta [Homo sapiens]
Length = 486
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 31/120 (25%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ E+ L+CPIC E F P +L CGH+ CK C++ +L L +
Sbjct: 6 SLLELEDWLQCPICLEVFKE----PLMLQCGHSYCKGCLV----------SLSCHLDAEL 51
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
CP C R G+ P N L ++E++ GD +V H S FCE Q
Sbjct: 52 RCPVC-----RQAVDGSSSLP--NVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQ 104
>gi|440906826|gb|ELR57047.1| RING finger protein 222 [Bos grunniens mutus]
Length = 209
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F ++ L CGH C +C++ + + Q+ I CP C +
Sbjct: 13 ECPVCYEKFRELQGASRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPICRYAT 68
Query: 105 FRVVYKGNLKFPRKNYFL 122
F + + K + + L
Sbjct: 69 FFLSSRWPAKLDKSSQIL 86
>gi|195496476|ref|XP_002095707.1| GE22558 [Drosophila yakuba]
gi|194181808|gb|EDW95419.1| GE22558 [Drosophila yakuba]
Length = 157
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|122692467|ref|NP_001073772.1| E3 ubiquitin-protein ligase TRIM23 [Bos taurus]
gi|296475857|tpg|DAA17972.1| TPA: tripartite motif-containing 23 [Bos taurus]
Length = 581
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + HSG + A SG S
Sbjct: 75 ----DRQVTELGDSGVWGLKKNFALLELLERLQ----NGHSGQYGAAEEAIGISGES 123
>gi|30023818|ref|NP_835226.1| E3 ubiquitin-protein ligase TRIM50 [Homo sapiens]
gi|56404881|sp|Q86XT4.1|TRI50_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465648|gb|AAL91071.1| tripartite motif protein 50 isoform alpha [Homo sapiens]
Length = 487
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 31/120 (25%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ E+ L+CPIC E F P +L CGH+ CK C++ +L L +
Sbjct: 6 SLLELEDWLQCPICLEVFKE----PLMLQCGHSYCKGCLV----------SLSCHLDAEL 51
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD---RVKSH-----SGFCEDRQ 145
CP C R G+ P N L ++E++ GD +V H S FCE Q
Sbjct: 52 RCPVC-----RQAVDGSSSLP--NVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQ 104
>gi|431898169|gb|ELK06864.1| E3 ubiquitin-protein ligase TRIM50 [Pteropus alecto]
Length = 487
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFRE----PLMLQCGHSYCKGCLVSL 43
>gi|350417892|ref|XP_003491631.1| PREDICTED: roquin-like [Bombus impatiens]
Length = 911
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CP+C F++ P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANL 45
>gi|340715688|ref|XP_003396341.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Bombus terrestris]
Length = 911
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CP+C F++ P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANL 45
>gi|260836373|ref|XP_002613180.1| hypothetical protein BRAFLDRAFT_73101 [Branchiostoma floridae]
gi|229298565|gb|EEN69189.1| hypothetical protein BRAFLDRAFT_73101 [Branchiostoma floridae]
Length = 612
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 15/63 (23%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPW 99
REE L C IC ++F P VL C HT C C+ WA + P CP
Sbjct: 16 REEFLSCSICTDTFKK----PKVLPCQHTFCSTCL--RDWAETRKP---------FQCPM 60
Query: 100 CNL 102
C +
Sbjct: 61 CRV 63
>gi|410903922|ref|XP_003965442.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Takifugu
rubripes]
Length = 580
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 27/107 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL + CP+
Sbjct: 35 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAVRCPF 80
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESM-NGDRVKSHSGFCED 143
+V G+ +KN+ LL ++E + NG + SG +D
Sbjct: 81 ----DRQVTELGDSGVWGLKKNFALLELLERLQNG--ASNQSGMADD 121
>gi|348521084|ref|XP_003448056.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oreochromis
niloticus]
Length = 637
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 23/107 (21%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
D+ S++S E+ L C IC +F + P + CGH C++C+L W
Sbjct: 5 DESQFSIMSLEDELTCSICLSTF----DCPVTIPCGHNFCQDCLLAT-WKES-------- 51
Query: 91 LPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSH 137
SCP C L + LK KN L +VE+ KS
Sbjct: 52 ----YSCPQCRTL---FATRPELK---KNTVLTAVVETFKVRSSKSE 88
>gi|26379548|dbj|BAC25419.1| unnamed protein product [Mus musculus]
Length = 407
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ ++ P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLRRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|47224831|emb|CAG06401.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E EC IC+ F++ P +L C HT C+ C+ L L + P +SCP C
Sbjct: 29 EEYECKICYNYFDLDRRAPKILECLHTFCEECLNTLH--------LREERPWRVSCPVCR 80
>gi|326671130|ref|XP_001919275.2| PREDICTED: RING finger protein 208-like [Danio rerio]
Length = 151
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E L+CP C ++N P +L C H++C+ C+ L + K+ FISCP C
Sbjct: 32 EPLDCPTCGHTYNFAGKRPRILSCLHSVCEECLQILYESCPKYK--------FISCPTCR 83
>gi|426251451|ref|XP_004019435.1| PREDICTED: tripartite motif-containing protein 64-like [Ovis aries]
Length = 448
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 16/87 (18%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
D D V RE L C IC F P + CGH+ C+ C L L W + P
Sbjct: 2 DSDTLQVFQRE--LTCSICMNCFL----DPVTIDCGHSFCRPC-LSLCWEEGQTPR---- 50
Query: 91 LPLFISCPWCNLLSFRVVYKGNLKFPR 117
SCP C+ LS R +K N+ R
Sbjct: 51 -----SCPECSGLSERPDFKTNIVLKR 72
>gi|410926111|ref|XP_003976522.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Takifugu
rubripes]
Length = 578
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
++ ++ EE L C IC +F+ VP CGH C NC+L L WA
Sbjct: 1 MAGLLQLEEDLSCSICLSTFDCPVTVP----CGHNFCNNCLL-LTWADC----------C 45
Query: 94 FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVES 128
SCP C R V+ +KN L +VES
Sbjct: 46 SFSCPQC-----RAVFPTRPDL-KKNTVLSTIVES 74
>gi|148356238|ref|NP_001038952.2| E3 ubiquitin-protein ligase SH3RF1 isoform 1 [Danio rerio]
gi|146327562|gb|AAI41795.1| LOC555925 protein [Danio rerio]
gi|190339698|gb|AAI63246.1| Si:dkey-15j16.4 [Danio rerio]
Length = 880
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 27 SECSDDDVSSVVSREESL----ECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+E ++ D +SV E +L ECP+C E + V L C HT C+ C+LG+
Sbjct: 2 NEYAEKDCASVKMDESALLDLLECPVCLERLDATAKV---LPCQHTFCRRCLLGI 53
>gi|341887873|gb|EGT43808.1| hypothetical protein CAEBREN_07847 [Caenorhabditis brenneri]
Length = 188
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 26/149 (17%)
Query: 2 WNFASTCLAGNVGLKNDSLKASEAASECSDD-DVSSVVSREESLE---------CPICWE 51
WN A GL+ + E+ + D + SS E++LE C IC+
Sbjct: 53 WNMADFLTVNESGLELLDTRIPESRNYNEKDIETSSDSDAEDTLEPLRELSCTACKICFR 112
Query: 52 SF--NMVENVPYVLW-CGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVV 108
+ + + +P +L CGHT+C C L L FI CP C ++
Sbjct: 113 EYSADSKKRIPLMLSSCGHTVCWKCAGKL---------LKQNYNSFICCPLCR----KIT 159
Query: 109 YKGNLKFPRKNYFLLWMVESMNGDRVKSH 137
Y G++ +NY ++ +++ N + +H
Sbjct: 160 YTGSVHQLPRNYAIIDVIQMKNRETTGTH 188
>gi|308457971|ref|XP_003091342.1| hypothetical protein CRE_22710 [Caenorhabditis remanei]
gi|308257202|gb|EFP01155.1| hypothetical protein CRE_22710 [Caenorhabditis remanei]
Length = 208
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
REES C +C + ++ N+P V+ CGH C NC+
Sbjct: 124 REESRICQLCLQEYSHEANIPKVIACGHICCHNCL 158
>gi|417405904|gb|JAA49642.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 1114
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E L CPIC+ F+ + P L C HT+CK C+
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCL 42
>gi|390360805|ref|XP_003729776.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50-like
[Strongylocentrotus purpuratus]
Length = 308
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
ESL CP+C E F P +L CGHT CK C+
Sbjct: 11 ESLACPMCLEVFK----APTLLACGHTFCKECL 39
>gi|114613903|ref|XP_527777.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 2 [Pan
troglodytes]
gi|114613905|ref|XP_001144726.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 1 [Pan
troglodytes]
Length = 487
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|48475186|gb|AAT44255.1| unknown protein [Oryza sativa Japonica Group]
gi|53980845|gb|AAV24766.1| unknown protein [Oryza sativa Japonica Group]
gi|215767233|dbj|BAG99461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 721
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E ECP+C F+ P VL CGH+LC CI
Sbjct: 13 EPPECPVCLSPFDAASAAPRVLPCGHSLCGPCI 45
>gi|440489327|gb|ELQ68986.1| DNA repair protein RAD5 [Magnaporthe oryzae P131]
Length = 1264
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
DV + E+ CPIC ++ VE+ VL CGH LC+ C+ QW
Sbjct: 852 DVVRRLKEVEAFSCPICMDA---VEDPAIVLPCGHALCRECL--TQW 893
>gi|389646983|ref|XP_003721123.1| hypothetical protein MGG_12631 [Magnaporthe oryzae 70-15]
gi|351638515|gb|EHA46380.1| hypothetical protein MGG_12631 [Magnaporthe oryzae 70-15]
Length = 1358
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
DV + E+ CPIC ++ VE+ VL CGH LC+ C+ QW
Sbjct: 946 DVVRRLKEVEAFSCPICMDA---VEDPAIVLPCGHALCRECL--TQW 987
>gi|86196344|gb|EAQ70982.1| hypothetical protein MGCH7_ch7g389 [Magnaporthe oryzae 70-15]
gi|440467046|gb|ELQ36287.1| DNA repair protein RAD5 [Magnaporthe oryzae Y34]
Length = 2047
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
DV + E+ CPIC ++ VE+ VL CGH LC+ C+ QW
Sbjct: 1635 DVVRRLKEVEAFSCPICMDA---VEDPAIVLPCGHALCRECL--TQW 1676
>gi|341895864|gb|EGT51799.1| hypothetical protein CAEBREN_06582 [Caenorhabditis brenneri]
Length = 446
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 39 SREESLECPICWESFN--MVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ S+EC IC E ++ + +P +L CGHTLC +C +Q P Q+ I
Sbjct: 124 SKQASIECQICGEHYSDTISSRIPRILTECGHTLCHSCAETIQKMS------PDQIS--I 175
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGD 132
CP R+V K ++ KN+ L+ ++ + +
Sbjct: 176 KCPI-----DRIVTKVKVEKLHKNFALIDLIRDRSDE 207
>gi|332255052|ref|XP_003276649.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 1 [Nomascus
leucogenys]
gi|332255054|ref|XP_003276650.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 isoform 2 [Nomascus
leucogenys]
Length = 487
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|268537462|ref|XP_002633867.1| Hypothetical protein CBG19915 [Caenorhabditis briggsae]
Length = 296
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
C IC +++ E P VL CGH+ CK CIL + + + L I+C C LS
Sbjct: 31 RCSICLINYDTREKRPRVLTCGHSFCKPCILEASTVIRRESS---GLIRSINCSECRALS 87
Query: 105 FRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
K P NY L ++ +N D CED
Sbjct: 88 ----EFSESKIP-INYELSTLIGELNLDVPLVSCTECED 121
>gi|327266926|ref|XP_003218254.1| PREDICTED: tripartite motif-containing protein 59-like [Anolis
carolinensis]
Length = 406
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L C IC+ F+ P VL C HT C+NC+ + F P++LPL CP
Sbjct: 5 EEELTCSICYSIFDD----PRVLPCSHTFCRNCLESVLQLSSTFSIWRPLRLPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|449687500|ref|XP_002154930.2| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Hydra
magnipapillata]
Length = 572
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 36 SVVSREESLECPICWESFNM-VENVPYVLWCGHTLCKNCILGLQ-WAVVKFP 85
+ ++ +LEC IC + F E VP VL CGH++C C+ LQ VV+ P
Sbjct: 25 KIQTKNNTLECRICDDLFAQHGEKVPRVLSCGHSICHECLSKLQNETVVQCP 76
>gi|341895794|gb|EGT51729.1| hypothetical protein CAEBREN_15514 [Caenorhabditis brenneri]
Length = 143
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Query: 32 DDVSSVVSREESLECPICWESF--NMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
+D + V+ C IC F N+ + P +L CGHT C C L+
Sbjct: 48 EDTMNPVTEHSVTTCKICLLGFSENLKKRAPLMLSCGHTFCWKCCKELKKQ--------- 98
Query: 90 QLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKS 136
+F++CP+C +F G LK KNY ++ M+ + + K
Sbjct: 99 NSNMFVTCPFCRKETF-----GLLKELPKNYAIIEMIPTRTTENGKK 140
>gi|341889549|gb|EGT45484.1| hypothetical protein CAEBREN_00409 [Caenorhabditis brenneri]
Length = 276
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW----AVVKFPTLPVQLPLFISCPWC 100
+C IC ++N V +L CGHT C +CI +Q A ++ P+ + I
Sbjct: 26 QCQICCSNYNETTKVAQMLHCGHTFCMDCIRNIQKYGNSAHLECPSCRSETKCDIDAVPT 85
Query: 101 NLLSFRVVYKGNLKFP 116
N L ++ K + P
Sbjct: 86 NFLVMEIMQKLQIMGP 101
>gi|357119993|ref|XP_003561716.1| PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1-like
[Brachypodium distachyon]
Length = 340
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 34 VSSVVSREESLECPICWES-FNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
+S + E SL CPIC ++ FN PY L CGH CK C G +V F + P
Sbjct: 224 ISETMKYEYSLTCPICLDTLFN-----PYALSCGHLFCKGCACGAA-SVYIFQGVKTA-P 276
Query: 93 LFISCPWCN 101
CP C
Sbjct: 277 PEAKCPVCR 285
>gi|242055769|ref|XP_002457030.1| hypothetical protein SORBIDRAFT_03g047430 [Sorghum bicolor]
gi|241929005|gb|EES02150.1| hypothetical protein SORBIDRAFT_03g047430 [Sorghum bicolor]
Length = 484
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 22/116 (18%)
Query: 31 DDDVSSVVSR------EESLE-CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVK 83
DDD ++V SR +++ E C IC E +E + CGH +C C L L
Sbjct: 323 DDDGTAVASRSQLDDDDDATELCGICLEQACSME----MQDCGHQMCAACTLALCCHSKP 378
Query: 84 FP-TLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
P TL +Q P +CP+C R++ N + E+ G V+SHS
Sbjct: 379 NPTTLALQPP---ACPFCRATITRLLVANNKTSNSSD-------EAALGGGVRSHS 424
>gi|113679781|ref|NP_001038257.1| E3 ubiquitin-protein ligase SH3RF1 isoform 2 [Danio rerio]
Length = 857
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 27 SECSDDDVSSVVSREESL----ECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+E ++ D +SV E +L ECP+C E + V L C HT C+ C+LG+
Sbjct: 2 NEYAEKDCASVKMDESALLDLLECPVCLERLDATAKV---LPCQHTFCRRCLLGI 53
>gi|118353784|ref|XP_001010157.1| Kelch motif family protein [Tetrahymena thermophila]
gi|89291924|gb|EAR89912.1| Kelch motif family protein [Tetrahymena thermophila SB210]
Length = 1073
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 44 LECPICWESFNMVENVPYVLW-CGHTLCKNCIL 75
+EC C E FNM+ +P +L CGH++C+ C++
Sbjct: 1 MECVNCNEGFNMINRIPRLLTNCGHSICETCLM 33
>gi|47218749|emb|CAG02735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 89
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E EC +C+ +++ V P +L CGHT C C+ + + TL SCP C
Sbjct: 31 EDTECAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSAELKTL--------SCPICR 82
Query: 102 LLS 104
++
Sbjct: 83 EVT 85
>gi|253741507|gb|EES98376.1| Hypothetical protein GL50581_4458 [Giardia intestinalis ATCC
50581]
Length = 373
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E LECP C +FN P L CGHT CK C+ + K
Sbjct: 2 ELLECPACNRTFN----APITLKCGHTFCKGCLSSKRQKACKI 40
>gi|222631641|gb|EEE63773.1| hypothetical protein OsJ_18594 [Oryza sativa Japonica Group]
Length = 860
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E ECP+C F+ P VL CGH+LC CI
Sbjct: 13 EPPECPVCLSPFDAASAAPRVLPCGHSLCGPCI 45
>gi|195590801|ref|XP_002085133.1| GD12476 [Drosophila simulans]
gi|194197142|gb|EDX10718.1| GD12476 [Drosophila simulans]
Length = 651
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|260835848|ref|XP_002612919.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
gi|229298301|gb|EEN68928.1| hypothetical protein BRAFLDRAFT_227863 [Branchiostoma floridae]
Length = 604
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCI--LGLQWAVVKFPTLPVQLPL 93
REE L C +C E+F P VL C HT C+NCI + + + PT Q+ L
Sbjct: 10 REELLSCGVCLETFTE----PRVLPCQHTFCQNCISKISADKRIFRCPTCREQVIL 61
>gi|297680255|ref|XP_002817916.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Pongo abelii]
Length = 489
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 13 EDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 45
>gi|149063049|gb|EDM13372.1| tripartite motif protein 50, isoform CRA_a [Rattus norvegicus]
Length = 243
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
++ L+CPIC E F P +L CGH+ CKNC+ L
Sbjct: 11 QDQLQCPICLEVFKE----PLMLQCGHSYCKNCLDSL 43
>gi|432916788|ref|XP_004079384.1| PREDICTED: LOW QUALITY PROTEIN: roquin-like [Oryzias latipes]
Length = 1133
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E L CPIC ++F P L CGHT+CK C+
Sbjct: 10 EFLLCPICTQTFEETVRRPISLGCGHTVCKMCL 42
>gi|221481110|gb|EEE19518.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 248
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 21 KASEAASECSDDDVSSVVSREESLECPICWESFNMVE-NVPYVLWCGHTLCKNCIL 75
K + A E +++V+ ECPIC E F E P VL CGH++C CIL
Sbjct: 9 KTANAEDEAREEEVARAS--HAGHECPICLEKFECGEMRRPKVLTCGHSICFLCIL 62
>gi|297827713|ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297327578|gb|EFH57998.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 1635
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ + + +++ R+E+ CPIC E ++ N V CGH+ C NC +A+ +
Sbjct: 1299 ASDPVEQEGENLLKRDEA--CPICQE---ILRNQKMVFQCGHSTCCNCF----FAMTERK 1349
Query: 86 TLPVQLPLFISCPWC 100
++ L ++ CP C
Sbjct: 1350 SVQETLQKWVMCPIC 1364
>gi|191961841|ref|NP_001076328.2| ring finger and CCCH-type zinc finger domains 1 [Danio rerio]
gi|190337303|gb|AAI63288.1| Ring finger and CCCH-type zinc finger domains 1 [Danio rerio]
Length = 1078
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV-----QLPL 93
E L CPIC ++F P L CGHT+CK C+ L F + QLP+
Sbjct: 10 EFLLCPICTQTFEENHRKPISLGCGHTVCKMCLNKLHRKACPFDQTTISTDIEQLPV 66
>gi|148676760|gb|EDL08707.1| mCG126320, isoform CRA_b [Mus musculus]
Length = 1137
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 22 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 64
>gi|109066279|ref|XP_001110857.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Macaca
mulatta]
gi|355560555|gb|EHH17241.1| E3 ubiquitin-protein ligase TRIM50 [Macaca mulatta]
gi|355747585|gb|EHH52082.1| E3 ubiquitin-protein ligase TRIM50 [Macaca fascicularis]
Length = 488
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLRCGHSYCKGCLVSL 43
>gi|47227681|emb|CAG09678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 948
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 73/200 (36%), Gaps = 25/200 (12%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN- 101
LEC IC+ FN V P +L C HT C C+ + + P I CP C
Sbjct: 754 DLECSICFSQFNNVFCCPKMLQCKHTFCLECLARINVKSAQ--------PSTIQCPLCRG 805
Query: 102 ----------LLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSS 151
L+ L + + + + S +VK + QP+ SS
Sbjct: 806 VTTLPALGLPTLATDASVLPYLPAAMQRVYSVRFLRSKGRLQVKRYGWLTLTVQPSYSSC 865
Query: 152 GSSTFGNQLNRGNHRRGQHHHHYHHHPEPAGSNRDHLHATNYLTVERIHSSLRKSLIFFV 211
S + R RRG P P NR A LT I + R + F+
Sbjct: 866 FFSRSSAGVRR--WRRGSDRSLDVGLPSPPAGNRG---AAGGLTEALIQLTGRPACRAFL 920
Query: 212 HLTAKFPLVVIFLLIVVYAI 231
L + L+V+ + I+++ I
Sbjct: 921 -LASMVLLMVLLMGIIIFLI 939
>gi|390345220|ref|XP_003726288.1| PREDICTED: uncharacterized protein LOC100888142 [Strongylocentrotus
purpuratus]
Length = 901
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E L+CP+C ++F P +L CGHT CK C+
Sbjct: 307 EGLQCPLCLDAFKN----PTLLACGHTFCKACL 335
>gi|224074758|ref|XP_002186858.1| PREDICTED: RING finger protein 222 [Taeniopygia guttata]
Length = 209
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E F +E L CGH+ C +C++ A L + I CP C ++
Sbjct: 14 ECPVCYEKFQPLEATHRRLSCGHSFCHDCLVKCLLAA----KLDGHVQSSIVCPVCRFVT 69
Query: 105 FRVVY------KGNLKFPRKNYFLLWMVES 128
F KG L+ P L + +S
Sbjct: 70 FLSEKKAPWPPKGTLEMPLSPSSLCQLAKS 99
>gi|55468848|emb|CAE51310.1| crgA protein [Blakeslea trispora]
Length = 611
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCIL 75
+ S ECPIC FN P CGHT C+NC++
Sbjct: 117 DSSTECPICCSRFNNPTTTP----CGHTFCRNCLI 147
>gi|449017032|dbj|BAM80434.1| photoregulatory zinc-finger protein COP1 [Cyanidioschyzon merolae
strain 10D]
Length = 855
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCIL 75
A C+ + V + +SLECPIC++ F CGHT C +CI+
Sbjct: 91 AQRCNHNQVKRLGPALKSLECPICFDLFRAAVTTR----CGHTFCFSCIM 136
>gi|402863190|ref|XP_003895914.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Papio anubis]
Length = 488
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLRCGHSYCKGCLVSL 43
>gi|344248497|gb|EGW04601.1| Ring finger and CCCH-type zinc finger domain-containing protein 2
[Cricetulus griseus]
Length = 835
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E L CPIC+ F+ + P L C HT+CK C+
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCL 42
>gi|340374806|ref|XP_003385928.1| PREDICTED: hypothetical protein LOC100633763 [Amphimedon
queenslandica]
Length = 964
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV 89
L C +C +N VP L C H++CK C+ LQ + LP+
Sbjct: 10 LHCSVCTVKYNTTTAVPVSLNCSHSMCKRCLSRLQTKQCPYDKLPI 55
>gi|24665272|ref|NP_648886.1| roquin, isoform A [Drosophila melanogaster]
gi|442632801|ref|NP_001261940.1| roquin, isoform C [Drosophila melanogaster]
gi|442632803|ref|NP_001261941.1| roquin, isoform B [Drosophila melanogaster]
gi|7294120|gb|AAF49474.1| roquin, isoform A [Drosophila melanogaster]
gi|61675677|gb|AAX51654.1| LD12033p [Drosophila melanogaster]
gi|220950406|gb|ACL87746.1| roq-PA [synthetic construct]
gi|440215887|gb|AGB94633.1| roquin, isoform C [Drosophila melanogaster]
gi|440215888|gb|AGB94634.1| roquin, isoform B [Drosophila melanogaster]
Length = 819
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|348527598|ref|XP_003451306.1| PREDICTED: RING finger protein 183-like [Oreochromis niloticus]
Length = 320
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E EC +C+ +++ V P +L CGHT C C+ + + TL SCP C
Sbjct: 105 EDTECAVCFCTYDNVFKTPKLLACGHTFCLECLARINVTSPELKTL--------SCPVC 155
>gi|195477611|ref|XP_002086368.1| GE22905 [Drosophila yakuba]
gi|194186158|gb|EDW99769.1| GE22905 [Drosophila yakuba]
Length = 822
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|195328119|ref|XP_002030764.1| GM24408 [Drosophila sechellia]
gi|194119707|gb|EDW41750.1| GM24408 [Drosophila sechellia]
Length = 792
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|410922549|ref|XP_003974745.1| PREDICTED: uncharacterized protein LOC101064877 [Takifugu rubripes]
Length = 321
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 15/90 (16%)
Query: 12 NVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCK 71
+V + + L S S CS++ LEC +C+ FN V P +L C HT C
Sbjct: 122 SVIIPSPDLHLSPLQSRCSENTC-------PDLECAVCFSQFNNVFRCPKMLQCRHTFCL 174
Query: 72 NCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
C+ + + P I CP C
Sbjct: 175 ECLARINVKSAQ--------PSTIQCPLCR 196
>gi|357622653|gb|EHJ74079.1| hypothetical protein KGM_18646 [Danaus plexippus]
Length = 760
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CP+C F + P L CGHTLC +CI L
Sbjct: 12 LNCPVCCRDFGLPPRSPISLGCGHTLCGHCIKHL 45
>gi|327286480|ref|XP_003227958.1| PREDICTED: tripartite motif-containing protein 35-like [Anolis
carolinensis]
Length = 500
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
S++ + +E L+CPIC+E F L CGH CK C+
Sbjct: 15 SAIATMKEELQCPICYEPFKDA----ATLCCGHNFCKGCV 50
>gi|154415885|ref|XP_001580966.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915189|gb|EAY19980.1| hypothetical protein TVAG_402350 [Trichomonas vaginalis G3]
Length = 231
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 42 ESLECPICWESFNMVENVPYVLW-CGHTLCKNC 73
+S+ CPIC E ++ E +P L+ CGHT+CK+C
Sbjct: 51 DSVLCPICCEIMDLPERMPITLFPCGHTICKSC 83
>gi|390361659|ref|XP_003729977.1| PREDICTED: tripartite motif-containing protein 59-like
[Strongylocentrotus purpuratus]
Length = 333
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+SL CP+C E+F P +L CGHT CK+C+
Sbjct: 10 DSLACPLCLEAFKS----PTLLQCGHTFCKDCL 38
>gi|291229556|ref|XP_002734741.1| PREDICTED: membrane associated DNA binding protein-like
[Saccoglossus kowalevskii]
Length = 440
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CPIC+ F+ +P L CGHT+C+ C+ L
Sbjct: 10 EFLLCPICYNDFDDNVRLPISLVCGHTVCRTCLAQL 45
>gi|148676759|gb|EDL08706.1| mCG126320, isoform CRA_a [Mus musculus]
Length = 1185
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|390353094|ref|XP_003728033.1| PREDICTED: uncharacterized protein LOC100892566
[Strongylocentrotus purpuratus]
Length = 678
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
SL CP+C E+F P +L CGHT CK+C+
Sbjct: 12 SLACPLCLEAFKS----PTLLQCGHTFCKDCL 39
>gi|322799316|gb|EFZ20704.1| hypothetical protein SINV_06176 [Solenopsis invicta]
Length = 522
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 44 LECPICWESFNMVE-NVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
LEC +C E F + VP +L CGHT+C +C+L L+ + + F+ CP+
Sbjct: 25 LECRVCEEVFTVDGVKVPRLLHCGHTVCHSCLLRLRTCMSE--------QQFLLCPFDRQ 76
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ ++ ++ +KN+ L+ ++E +
Sbjct: 77 PTDVGPHENSVYSLKKNFALIELLERLE 104
>gi|393244679|gb|EJD52191.1| hypothetical protein AURDEDRAFT_159046 [Auricularia delicata
TFB-10046 SS5]
Length = 1065
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILG 76
ECP C F+++EN + CGH+ CK+CILG
Sbjct: 818 ECPFC---FDVMENPVLLPICGHSCCKDCILG 846
>gi|302689153|ref|XP_003034256.1| hypothetical protein SCHCODRAFT_106578 [Schizophyllum commune H4-8]
gi|300107951|gb|EFI99353.1| hypothetical protein SCHCODRAFT_106578, partial [Schizophyllum
commune H4-8]
Length = 236
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 12/58 (20%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+ C +C+ E+ P VL CGHTLC++C+ + + P + F++CP C+
Sbjct: 150 MSCTVCF----TAESTPRVLGCGHTLCESCLTAM------YHAKPSK--SFLACPICD 195
>gi|155030209|ref|NP_001094061.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Mus musculus]
gi|73621224|sp|P0C090.1|RC3H2_MOUSE RecName: Full=RING finger and CCCH-type zinc finger
domain-containing protein 2; AltName:
Full=Membrane-associated nucleic acid-binding protein
Length = 1187
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|194873676|ref|XP_001973257.1| GG13458 [Drosophila erecta]
gi|190655040|gb|EDV52283.1| GG13458 [Drosophila erecta]
Length = 827
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|341874966|gb|EGT30901.1| hypothetical protein CAEBREN_13469 [Caenorhabditis brenneri]
Length = 376
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLP- 92
+ V+ E L+C +C ++ + VP VL CGH+LCK C Q QLP
Sbjct: 288 TKVLIDSEDLQCNVCILQYSE-KRVPLVLSKCGHSLCKKCCKAAQR----------QLPH 336
Query: 93 -LFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKS 136
FI CP+C R G + KNY ++ +V+ + ++
Sbjct: 337 DRFIICPFC-----RTENPGPIAMLPKNYAIMGIVQKIGQQVIRE 376
>gi|149731973|ref|XP_001495902.1| PREDICTED: e3 ubiquitin-protein ligase RNF182-like [Equus caballus]
Length = 247
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ +D S S E LEC IC+ +N+ + P VL C H +C C+ + ++ F
Sbjct: 2 ASQPPEDAAESQGSDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DSPQGV---IVCPFC 67
>gi|109734772|gb|AAI17953.1| Ring finger and CCCH-type zinc finger domains 2 [Mus musculus]
Length = 1187
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|156397370|ref|XP_001637864.1| predicted protein [Nematostella vectensis]
gi|156224980|gb|EDO45801.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 33 DVSSVVSR-EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
D +++ R ++ +ECPIC E F P VL C HT C C++GL P
Sbjct: 2 DKTNIEERLQKEVECPICLERFKD----PRVLPCLHTFCYECLVGLASRYKTEGKWP--- 54
Query: 92 PLFISCPWCNLLSFRVVYKGNLKFPRKNYFL--LWMVESMNGDRVKSHSGFCEDRQPASS 149
CP C ++ V + + N+ + L V + + K H C + A
Sbjct: 55 -----CPQCKMVV--QVSPAEVSSLKVNFLMNTLLSVVTNDSKSAKPHCQMCTSQDHA-- 105
Query: 150 SSGSSTFGNQLNR---GNHRR---GQHHH 172
G + G + +H+R QHHH
Sbjct: 106 KGGCTDCGELVCEACIASHKRMRATQHHH 134
>gi|109730823|gb|AAI17952.1| Ring finger and CCCH-type zinc finger domains 2 [Mus musculus]
Length = 1187
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|9837125|gb|AAG00432.1|AF255303_1 membrane-associated nucleic acid binding protein [Homo sapiens]
Length = 1048
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|194748759|ref|XP_001956812.1| GF24386 [Drosophila ananassae]
gi|190624094|gb|EDV39618.1| GF24386 [Drosophila ananassae]
Length = 848
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
L CPIC F + P L CGHT+CK C+ L
Sbjct: 12 LNCPICCNEFAASQRCPVSLGCGHTICKLCLTTL 45
>gi|157822509|ref|NP_001101309.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Rattus norvegicus]
gi|149047914|gb|EDM00530.1| membrane associated DNA binding protein (predicted) [Rattus
norvegicus]
Length = 1187
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|403362626|gb|EJY81042.1| Protein-L-isoaspartate O-methyltransferase [Oxytricha trifallax]
Length = 512
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
S EE L C +C E N + P L CGHT C C+
Sbjct: 3 SIEEVLSCKVCMERMNNSDRKPLFLSCGHTFCSKCL 38
>gi|341878222|gb|EGT34157.1| hypothetical protein CAEBREN_06458 [Caenorhabditis brenneri]
Length = 276
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW----AVVKFPTLPVQLPLFISCPWC 100
+C IC ++N V +L CGHT C +CI +Q A ++ P+ + I
Sbjct: 26 QCQICCSNYNETTKVAQMLHCGHTFCMDCIKNIQKYGNSAHLECPSCRSETKCDIDAVPT 85
Query: 101 NLLSFRVVYKGNLKFP 116
N L ++ K + P
Sbjct: 86 NFLVMEIMQKLQIMGP 101
>gi|296474021|tpg|DAA16136.1| TPA: ring finger protein 182 [Bos taurus]
Length = 249
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ ++ S VS E LEC IC+ +N+ + P VL C H +C C+ ++ F
Sbjct: 2 ASQLPEEAAKSQVSDE--LECKICYNRYNLKQRKPKVLGCCHRVCAKCL----CKIINFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DTPHGV---IVCPFC 67
>gi|354484707|ref|XP_003504528.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Cricetulus griseus]
Length = 1065
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|348521086|ref|XP_003448057.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oreochromis
niloticus]
Length = 647
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 23/107 (21%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
D+ S++S E+ L C IC +F + P + CGH C++C+L W
Sbjct: 5 DESQFSIMSLEDELTCSICLSTF----DCPVTIPCGHNFCQDCLLAT-WKES-------- 51
Query: 91 LPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSH 137
SCP C L + LK KN L +VE+ KS
Sbjct: 52 ----YSCPQCRTL---FATRPELK---KNTVLTAVVETFKVRSSKSE 88
>gi|308498690|ref|XP_003111531.1| hypothetical protein CRE_03163 [Caenorhabditis remanei]
gi|308239440|gb|EFO83392.1| hypothetical protein CRE_03163 [Caenorhabditis remanei]
Length = 292
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 21 KASEAASECSDDDVSSVVSRE----ESLECPICWESFNM--VENVPYVLW-CGHTLCKNC 73
K E + DD R+ L+C IC + ++ + P +L CGHTLC+ C
Sbjct: 176 KLKETVEDSGSDDELEFEERKVFSIRELQCNICLKKYSSESKKRTPRILTRCGHTLCQRC 235
Query: 74 ILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ T+ + + CP+C ++ + Y+ L KNY +L +++ M
Sbjct: 236 V----------DTISINRS--VKCPFCRKYTYILGYELLL----KNYIVLEVIQEMR 276
>gi|359070414|ref|XP_002691620.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Bos taurus]
Length = 1080
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|341887933|gb|EGT43868.1| hypothetical protein CAEBREN_25261 [Caenorhabditis brenneri]
Length = 285
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCI 74
C +C E F + PYVL CGHT C+ C+
Sbjct: 165 CSLCTERFRIFFRRPYVLACGHTFCQQCL 193
>gi|218196826|gb|EEC79253.1| hypothetical protein OsI_20016 [Oryza sativa Indica Group]
Length = 824
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
E ECP+C F+ P VL CGH+LC CI
Sbjct: 13 EPPECPVCLSPFDAASAAPRVLPCGHSLCGPCI 45
>gi|153252110|ref|NP_659488.2| RING finger protein 183 [Homo sapiens]
gi|119607771|gb|EAW87365.1| ring finger protein 183, isoform CRA_b [Homo sapiens]
gi|119607772|gb|EAW87366.1| ring finger protein 183, isoform CRA_b [Homo sapiens]
Length = 192
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
RE ECP+CW FN + P +L C H+ C C+
Sbjct: 6 GRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECL 41
>gi|118150974|ref|NP_001071406.1| E3 ubiquitin-protein ligase RNF182 [Bos taurus]
gi|115305358|gb|AAI23594.1| Ring finger protein 182 [Bos taurus]
Length = 249
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ ++ S VS E LEC IC+ +N+ + P VL C H +C C+ ++ F
Sbjct: 2 ASQLPEEAAESQVSDE--LECKICYNRYNLKQRKPKVLGCCHRVCAKCL----CKIINFG 55
Query: 86 TLPVQLPLFISCPWC 100
P + I CP+C
Sbjct: 56 DTPHGV---IVCPFC 67
>gi|345329752|ref|XP_001512234.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Ornithorhynchus anatinus]
Length = 1084
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|237829797|ref|XP_002364196.1| hypothetical protein TGME49_109280 [Toxoplasma gondii ME49]
gi|211961860|gb|EEA97055.1| hypothetical protein TGME49_109280 [Toxoplasma gondii ME49]
gi|221507060|gb|EEE32664.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 248
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 21 KASEAASECSDDDVSSVVSREESLECPICWESFNMVE-NVPYVLWCGHTLCKNCIL 75
K + A E +++V+ ECPIC E F E P VL CGH++C CIL
Sbjct: 9 KTANAEDEAREEEVARAS--HAGHECPICLEKFECGEMRRPKVLTCGHSICFLCIL 62
>gi|126294079|ref|XP_001365118.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Monodelphis domestica]
Length = 1194
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|426254717|ref|XP_004021023.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
TRIM50 [Ovis aries]
Length = 456
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SV E+ L+CP+C E F P +L CGH+ CK C++ +
Sbjct: 6 SVPELEDRLQCPMCLEVFKE----PLMLQCGHSYCKGCLVSV 43
>gi|118380976|ref|XP_001023650.1| zinc finger protein [Tetrahymena thermophila]
gi|89305417|gb|EAS03405.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 359
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 34 VSSVVSRE-ESLECPICWESFNMVENVPYVLW-CGHTLCKNCILGLQWAVVKFPTLPVQL 91
+ +S+E E+ CPIC+E N P +++ CGHT CK CI +P
Sbjct: 122 LEQKISKEIENCTCPICYELMVPPNNSPILIFPCGHTFCKTCI------------IPKDK 169
Query: 92 PLFISCPWC 100
CP+C
Sbjct: 170 TKLNKCPFC 178
>gi|355753046|gb|EHH57092.1| Membrane-associated nucleic acid-binding protein [Macaca
fascicularis]
Length = 1191
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|355567454|gb|EHH23795.1| Membrane-associated nucleic acid-binding protein [Macaca mulatta]
Length = 1191
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|348570124|ref|XP_003470847.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like isoform 2 [Cavia
porcellus]
Length = 1197
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|395505653|ref|XP_003757154.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Sarcophilus harrisii]
Length = 1194
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|390458336|ref|XP_002743333.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Callithrix jacchus]
Length = 1191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|348570122|ref|XP_003470846.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like isoform 1 [Cavia
porcellus]
Length = 1188
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|301622927|ref|XP_002940778.1| PREDICTED: RING finger protein 183-like [Xenopus (Silurana)
tropicalis]
Length = 178
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
++ V + +CP+CW +N P +L C H C C+ L A P+
Sbjct: 1 MADAVKLDPDWDCPVCWNPYNPTSRTPKLLHCNHCFCLECLERLSQAS----------PM 50
Query: 94 FISCPWCN 101
I CP C
Sbjct: 51 RIPCPLCR 58
>gi|291408383|ref|XP_002720526.1| PREDICTED: ring finger and CCCH-type zinc finger domains 2
isoform 2 [Oryctolagus cuniculus]
Length = 1188
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|291408381|ref|XP_002720525.1| PREDICTED: ring finger and CCCH-type zinc finger domains 2
isoform 1 [Oryctolagus cuniculus]
Length = 1190
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|156105697|ref|NP_001094058.1| RING finger and CCCH-type zinc finger domain-containing protein 2
isoform 1 [Homo sapiens]
gi|73621223|sp|Q9HBD1.2|RC3H2_HUMAN RecName: Full=RING finger and CCCH-type zinc finger
domain-containing protein 2; AltName:
Full=Membrane-associated nucleic acid-binding protein;
AltName: Full=RING finger protein 164
gi|119607953|gb|EAW87547.1| membrane associated DNA binding protein, isoform CRA_a [Homo
sapiens]
gi|119607956|gb|EAW87550.1| membrane associated DNA binding protein, isoform CRA_a [Homo
sapiens]
Length = 1191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|403299884|ref|XP_003940703.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Saimiri boliviensis
boliviensis]
Length = 1191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|380792785|gb|AFE68268.1| RING finger and CCCH-type zinc finger domain-containing protein 2
isoform 1, partial [Macaca mulatta]
Length = 1137
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|115454375|ref|NP_001050788.1| Os03g0650900 [Oryza sativa Japonica Group]
gi|75296682|sp|Q7XZZ3.1|BAHL1_ORYSJ RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like 1
gi|308191416|sp|A2XK56.1|BAHL1_ORYSI RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like 1
gi|31712090|gb|AAP68394.1| putative SPX domain containing protein [Oryza sativa Japonica
Group]
gi|62733417|gb|AAX95534.1| Putative SPX protein [Oryza sativa Japonica Group]
gi|108710124|gb|ABF97919.1| SPX domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549259|dbj|BAF12702.1| Os03g0650900 [Oryza sativa Japonica Group]
gi|125545077|gb|EAY91216.1| hypothetical protein OsI_12825 [Oryza sativa Indica Group]
gi|125587300|gb|EAZ27964.1| hypothetical protein OsJ_11925 [Oryza sativa Japonica Group]
Length = 339
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 34 VSSVVSREESLECPICWES-FNMVENVPYVLWCGHTLCKNCILG 76
+S + E SL CPIC ++ FN PY L CGH CK C G
Sbjct: 223 ISETMKYEYSLTCPICLDTLFN-----PYALSCGHLFCKGCACG 261
>gi|426362969|ref|XP_004048621.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Gorilla gorilla gorilla]
Length = 1191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|426223076|ref|XP_004005705.1| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Ovis aries]
Length = 1195
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|410979054|ref|XP_003995901.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Felis catus]
Length = 1191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|351702118|gb|EHB05037.1| Ring finger and CCCH-type zinc finger domain-containing protein 2
[Heterocephalus glaber]
Length = 1189
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|156105699|ref|NP_061323.2| RING finger and CCCH-type zinc finger domain-containing protein 2
isoform 2 [Homo sapiens]
gi|119607954|gb|EAW87548.1| membrane associated DNA binding protein, isoform CRA_b [Homo
sapiens]
Length = 1064
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|388452726|ref|NP_001252931.1| RING finger and CCCH-type zinc finger domain-containing protein 2
[Macaca mulatta]
gi|383414037|gb|AFH30232.1| RING finger and CCCH-type zinc finger domain-containing protein 2
isoform 1 [Macaca mulatta]
Length = 1191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|74760778|sp|Q96D59.1|RN183_HUMAN RecName: Full=RING finger protein 183
gi|15991882|gb|AAH13036.1| Ring finger protein 183 [Homo sapiens]
gi|123984052|gb|ABM83500.1| ring finger protein 183 [synthetic construct]
gi|123998229|gb|ABM86716.1| ring finger protein 183 [synthetic construct]
Length = 192
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
RE ECP+CW FN + P +L C H+ C C+
Sbjct: 6 GRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECL 41
>gi|403266161|ref|XP_003925264.1| PREDICTED: RING finger protein 183 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403266163|ref|XP_003925265.1| PREDICTED: RING finger protein 183 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 192
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
RE ECP+CW FN + P +L C H+ C C+
Sbjct: 6 GRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECL 41
>gi|395740927|ref|XP_002820235.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Pongo abelii]
Length = 1176
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|359320518|ref|XP_003639362.1| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Canis lupus
familiaris]
Length = 1195
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|358414580|ref|XP_001251111.2| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Bos taurus]
Length = 1195
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|301791992|ref|XP_002930964.1| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 1199
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|281352240|gb|EFB27824.1| hypothetical protein PANDA_021624 [Ailuropoda melanoleuca]
Length = 1189
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|410353137|gb|JAA43172.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
Length = 1189
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|119607955|gb|EAW87549.1| membrane associated DNA binding protein, isoform CRA_c [Homo
sapiens]
Length = 1007
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|332832815|ref|XP_520240.3| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 isoform 6 [Pan troglodytes]
gi|397526548|ref|XP_003833184.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Pan paniscus]
gi|410215732|gb|JAA05085.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
gi|410258374|gb|JAA17154.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
gi|410301054|gb|JAA29127.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
gi|410353135|gb|JAA43171.1| ring finger and CCCH-type domains 2 [Pan troglodytes]
Length = 1191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|443720821|gb|ELU10406.1| hypothetical protein CAPTEDRAFT_146794, partial [Capitella
teleta]
gi|443730823|gb|ELU16175.1| hypothetical protein CAPTEDRAFT_97658, partial [Capitella teleta]
Length = 216
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW--AVVKFPTLPVQLPLFISCP 98
L C IC E+F + P +L C H+ CK C+L + + V PT + PL CP
Sbjct: 19 LTCSICMEAFGEGDRQPKLLPCHHSFCKQCLLQMARSHSFVDCPTCRERTPL--PCP 73
>gi|405975932|gb|EKC40461.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 514
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
++VV+++ L CPIC E FN+ + +P C HT C+ CI A + +
Sbjct: 2 ATAVVNKDCDLNCPICLEKFNLPKKLP----CLHTFCELCIQSYVQA-----SETTEDTK 52
Query: 94 FISCPWC 100
F CP C
Sbjct: 53 FFRCPLC 59
>gi|403370525|gb|EJY85127.1| hypothetical protein OXYTRI_17017 [Oxytricha trifallax]
Length = 292
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
L C C + +N P + CGH +C+ C + +K Q P+ +SC +
Sbjct: 2 LTCKACKKIYNTTTRQPQFMTCGHPICQQCFTQYEQQALKIQDEKYQCPIKVSCQQTQI 60
>gi|395824143|ref|XP_003785330.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Otolemur garnettii]
Length = 1188
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|338720503|ref|XP_001502377.3| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Equus caballus]
Length = 1195
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|332229954|ref|XP_003264151.1| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Nomascus
leucogenys]
Length = 1203
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|350579628|ref|XP_001927873.4| PREDICTED: LOW QUALITY PROTEIN: RING finger and CCCH-type zinc
finger domain-containing protein 2 [Sus scrofa]
Length = 1196
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|296482188|tpg|DAA24303.1| TPA: Tandem Array expression Modifier family member (tam-1)-like
[Bos taurus]
Length = 1191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|440890310|gb|ELR44806.1| RING finger and CCCH-type zinc finger domain-containing protein
2, partial [Bos grunniens mutus]
Length = 1189
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|431898804|gb|ELK07174.1| Ring finger and CCCH-type zinc finger domain-containing protein 2
[Pteropus alecto]
Length = 1188
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|426246399|ref|XP_004016982.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Ovis aries]
Length = 574
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + H+G + A SG S
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ----NGHTGQYGAAEEAIGISGES 123
>gi|449478321|ref|XP_002189968.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Taeniopygia guttata]
Length = 1191
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|431900806|gb|ELK08247.1| RING finger protein 183 [Pteropus alecto]
Length = 188
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 38 VSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
V + ECP+CW FN + + P VL C H+ C C+
Sbjct: 3 VQQSREPECPVCWNPFNNMFHTPKVLDCCHSFCVECL 39
>gi|388582463|gb|EIM22768.1| hypothetical protein WALSEDRAFT_44505 [Wallemia sebi CBS 633.66]
Length = 1049
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 18 DSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCIL 75
DS A + ++ + + + V EE+ ECPIC+E NM ++P +L C H CK C+L
Sbjct: 768 DSNYAQQVLNDLAQANNNDQVDEEEN-ECPICFE--NM--SIPVLLPCMHKSCKQCVL 820
>gi|344271955|ref|XP_003407802.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Loxodonta africana]
Length = 1191
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|341898601|gb|EGT54536.1| hypothetical protein CAEBREN_03224 [Caenorhabditis brenneri]
Length = 493
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
+L CP+C+E F+ VP CGHT+C +C L+ + L++ CP C
Sbjct: 273 ALNCPVCFEIFD---GVPQSYPCGHTVCFSCSESLKGH---------EEVLWLRCPVCRK 320
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNR 162
+ V KNY L+ ++ S+ D + S + ++ S +S NQL +
Sbjct: 321 PADSTV---------KNYALINVLASL--DVIPSKEKVLQKVYDSTVSINASIKYNQLRK 369
Query: 163 GNHRR 167
N ++
Sbjct: 370 DNAKK 374
>gi|341875541|gb|EGT31476.1| hypothetical protein CAEBREN_09846 [Caenorhabditis brenneri]
Length = 334
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 10 AGNVGLKNDSLKASEAASECSDDDV-SSVVSREE---SLECPICWESFNMVENVPYVLWC 65
+GN+ L + + A AA + + V +S ++ EE LEC IC F+ V+ + C
Sbjct: 212 SGNLKLMSVPVLAPRAAEKDAKLVVPTSTMTFEEIDPRLECKICSSEFDDVKIPRMLKEC 271
Query: 66 GHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWM 125
GH+LC+ C L L + LF CP+C ++ V G+ KN+F++ M
Sbjct: 272 GHSLCEGCADNLL-------QLSKRQHLF--CPFCRKVT---VVNGSASMLPKNFFIVDM 319
Query: 126 VESMNGDR 133
++ R
Sbjct: 320 IDERKNKR 327
>gi|118099494|ref|XP_415394.2| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2 [Gallus gallus]
Length = 1195
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|380792909|gb|AFE68330.1| roquin, partial [Macaca mulatta]
Length = 64
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+CK C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPF 52
>gi|326930512|ref|XP_003211390.1| PREDICTED: RING finger and CCCH-type zinc finger
domain-containing protein 2-like [Meleagris gallopavo]
Length = 1195
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|312094943|ref|XP_003148194.1| hypothetical protein LOAG_12633 [Loa loa]
gi|307756641|gb|EFO15875.1| hypothetical protein LOAG_12633 [Loa loa]
Length = 104
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C+E F +P +L CGH+ C +CI L+++ + CP C SF
Sbjct: 30 CQVCFEPFKQNICIPKLLPCGHSFCHDCITALKFSSI----------YICKCPICR-YSF 78
Query: 106 RVVYKGNLKFPRKNYFLLWMVES 128
+ Y + KFP NY LL ++ S
Sbjct: 79 PLRY--DTKFP-TNYSLLALIFS 98
>gi|156402800|ref|XP_001639778.1| predicted protein [Nematostella vectensis]
gi|156226908|gb|EDO47715.1| predicted protein [Nematostella vectensis]
Length = 750
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E L+CPIC E++ P VL C HT C++C+ G+ + I CP C
Sbjct: 11 EHLLKCPICLETYR----TPKVLPCLHTFCQHCLKGMIQSGEN----------IIVCPTC 56
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGF---CEDRQPASS 149
V K + N+F+ M++ ++ S F CEDR ASS
Sbjct: 57 RCEV--CVPKEGVSALSTNFFINNMLDFLSVALSNSKPIFCTNCEDRNTASS 106
>gi|296190618|ref|XP_002743260.1| PREDICTED: RING finger protein 183 [Callithrix jacchus]
Length = 192
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
RE ECP+CW FN + P +L C H+ C C+
Sbjct: 6 GRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECL 41
>gi|34921712|sp|Q8BGX0.1|TRI23_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM23; AltName:
Full=ADP-ribosylation factor domain-containing protein
1; AltName: Full=GTP-binding protein ARD-1; AltName:
Full=Tripartite motif-containing protein 23
gi|26333173|dbj|BAC30304.1| unnamed protein product [Mus musculus]
gi|26334903|dbj|BAC31152.1| unnamed protein product [Mus musculus]
gi|37747806|gb|AAH59017.1| Trim23 protein [Mus musculus]
gi|38614149|gb|AAH56390.1| Trim23 protein [Mus musculus]
Length = 574
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + + + + A +SG S
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAA----EEAIGTSGES 123
>gi|26326825|dbj|BAC27156.1| unnamed protein product [Mus musculus]
Length = 574
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + + + + A +SG S
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAA----EEAIGTSGES 123
>gi|354482647|ref|XP_003503509.1| PREDICTED: RING finger protein 183-like [Cricetulus griseus]
Length = 192
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+E + ECP+CW FN + P VL C H+ C C+
Sbjct: 6 GQELTAECPVCWNPFNNTFHTPKVLDCCHSFCVECL 41
>gi|195054038|ref|XP_001993933.1| GH22295 [Drosophila grimshawi]
gi|193895803|gb|EDV94669.1| GH22295 [Drosophila grimshawi]
Length = 202
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 38 VSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
S EE +CP+C ES +++ P CGH CK CI + A K P
Sbjct: 141 TSVEEPYKCPVCLES--VLKKEPSSTRCGHIFCKICIQAAEHATHKCP 186
>gi|348574716|ref|XP_003473136.1| PREDICTED: RING finger protein 224-like [Cavia porcellus]
Length = 157
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 29 CSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
C+ ++V++ +R +C IC+ ++++ ++P L+CGHT C+ C+ L
Sbjct: 8 CALEEVAAPTARRN--DCIICYSAYDLTGHLPRRLYCGHTFCQACVRRL 54
>gi|390365340|ref|XP_796849.3| PREDICTED: tripartite motif-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 753
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 30/117 (25%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
L C IC + + VP VL C HT C+NC+ +P + L ++CP C
Sbjct: 39 LVCGICLDRYK----VPKVLPCLHTFCQNCLENY---------VPSE-SLTLTCPLCRQQ 84
Query: 104 SFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQL 160
S +V + + + N+F+ ++E + +P S+ G S G+Q+
Sbjct: 85 S--IVPERGVAGLQSNFFITNLMEVL--------------ERPESNGGGDSPIGDQM 125
>gi|55632153|ref|XP_520199.1| PREDICTED: RING finger protein 183 isoform 4 [Pan troglodytes]
gi|114626232|ref|XP_001151188.1| PREDICTED: RING finger protein 183 isoform 2 [Pan troglodytes]
gi|397526371|ref|XP_003833101.1| PREDICTED: RING finger protein 183 isoform 1 [Pan paniscus]
gi|397526373|ref|XP_003833102.1| PREDICTED: RING finger protein 183 isoform 2 [Pan paniscus]
Length = 192
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
RE ECP+CW FN + P +L C H+ C C+
Sbjct: 6 GRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECL 41
>gi|328772691|gb|EGF82729.1| hypothetical protein BATDEDRAFT_34394 [Batrachochytrium
dendrobatidis JAM81]
Length = 740
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 11 GNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLC 70
G++G+ SL ++ A +E +S + +ECPIC+ +N+ + C H +C
Sbjct: 234 GSMGIGQRSL-STNALTEIPPRQISLAQLYKTPIECPICF--LYYPKNINFTRCCDHPIC 290
Query: 71 KNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVY 109
+C + ++ + F P + CP+C + +F + Y
Sbjct: 291 TDCFIQIKRSQTTFE--PAE------CPYCVVPNFGITY 321
>gi|395824036|ref|XP_003785278.1| PREDICTED: RING finger protein 183 [Otolemur garnettii]
Length = 191
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
R+ ECP+CW FN + P VL C H+ C C+
Sbjct: 6 GRQLEAECPVCWNPFNNTFHTPKVLDCCHSFCVECL 41
>gi|312067205|ref|XP_003136633.1| hypothetical protein LOAG_01045 [Loa loa]
Length = 606
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 3 NFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSRE-ESLECPICWESFNMVENVPY 61
NF + A N+ + +K S A + D + SV + E S+ C IC E F++ + +P
Sbjct: 8 NFKAYMDANNLKSRRRMIKTSSATN--LDKNEFSVKNAEYHSIRCEICSEPFHIRKRLPK 65
Query: 62 VLWCGHTLCKNCILGL 77
+L C H C+ CI L
Sbjct: 66 LLPCEHNFCEQCIFSL 81
>gi|444720557|gb|ELW61339.1| E3 ubiquitin-protein ligase TRIM50 [Tupaia chinensis]
Length = 486
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
S+ ++ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SMPELQDQLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|449276529|gb|EMC85001.1| E3 ubiquitin-protein ligase TRIM50 [Columba livia]
Length = 495
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
S+ E+ L CPIC E F P +L CGH+ CK+C++ L
Sbjct: 6 SINELEDQLLCPICLEVFKE----PLMLQCGHSYCKSCVVSL 43
>gi|348534001|ref|XP_003454492.1| PREDICTED: E3 ubiquitin-protein ligase NHLRC1-like [Oreochromis
niloticus]
Length = 412
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 44 LECPICWESFN--MVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
LEC +C+E+F+ E P L CGH LC CI L +++ + CP+C
Sbjct: 25 LECKVCFETFSSQQRERRPQNLSCGHVLCLECITALSHPLLR----------KLECPFCR 74
Query: 102 LL 103
L
Sbjct: 75 QL 76
>gi|29789263|ref|NP_109656.1| E3 ubiquitin-protein ligase TRIM23 [Mus musculus]
gi|26326833|dbj|BAC27160.1| unnamed protein product [Mus musculus]
Length = 554
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 9 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 54
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + + + + A +SG S
Sbjct: 55 ----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAA----EEAIGTSGES 103
>gi|341895871|gb|EGT51806.1| hypothetical protein CAEBREN_05785 [Caenorhabditis brenneri]
Length = 502
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 18/118 (15%)
Query: 18 DSLKASEAASECSDDDVSSVVSREESLECPICWESFN--MVENVPYVL-WCGHTLCKNCI 74
D++ ++ + + +D +S+ SR+ +LEC +C+E ++ + ++P +L CGHTLC +C
Sbjct: 100 DNMPSNGGSGDLNDPSLSN--SRQANLECKVCFEPYSDTIYNSIPLLLSECGHTLCHSCA 157
Query: 75 LGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGD 132
LQ KF P +L I CP+ R K ++ KN+ ++ ++ +
Sbjct: 158 DTLQ----KFS--PDKLS--IDCPF-----DRTTTKVKVESLHKNFAIIDLIREKKDE 202
>gi|340374497|ref|XP_003385774.1| PREDICTED: hypothetical protein LOC100634228 [Amphimedon
queenslandica]
Length = 1150
Score = 39.3 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 15 LKNDSLKASEAASECSDD----DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLC 70
L+N+ L + A + D D VV EE ECP+C+ + E + + C H +C
Sbjct: 887 LENEKLMQRQQAEKNYRDLLNTDAVPVVLNEEEFECPVCYVDIDPGEGI-RLRDCLHMVC 945
Query: 71 KNCILG 76
KNC+ G
Sbjct: 946 KNCLKG 951
>gi|326673005|ref|XP_003199774.1| PREDICTED: probable E3 ubiquitin-protein ligase TRIM8-like [Danio
rerio]
Length = 194
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L+CP+C + F P L CGH C+ CI + W + + T + PLF CP C
Sbjct: 5 EEKLKCPVCVDVFTD----PVCLPCGHNFCQTCIQAV-WNMDESKT-STEEPLF--CPEC 56
Query: 101 NLL 103
+L
Sbjct: 57 QIL 59
>gi|395843918|ref|XP_003794718.1| PREDICTED: tripartite motif-containing protein 59-like, partial
[Otolemur garnettii]
Length = 141
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
E+ L CPIC+ F P VL C HT C+NC+ + A F P+++PL CP
Sbjct: 5 EDELTCPICYSIFED----PRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPL--KCPN 58
Query: 100 C 100
C
Sbjct: 59 C 59
>gi|291415673|ref|XP_002724075.1| PREDICTED: tripartite motif-containing 64 [Oryctolagus cuniculus]
Length = 450
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
D +++ ++ L CPIC F P + CGH C++C L L W + P
Sbjct: 2 DPATLQVFQQELTCPICMNFFL----DPVRIDCGHNFCRSC-LSLSWEEAETP------- 49
Query: 93 LFISCPWCNLLSFRVVYKGNL 113
+ CP C +S + +K N+
Sbjct: 50 --MCCPMCKEMSEKTNFKTNV 68
>gi|23943803|ref|NP_705724.1| RING finger protein 183 [Mus musculus]
gi|81901304|sp|Q8QZS5.1|RN183_MOUSE RecName: Full=RING finger protein 183
gi|19343865|gb|AAH25512.1| Ring finger protein 183 [Mus musculus]
gi|26383514|dbj|BAC25537.1| unnamed protein product [Mus musculus]
gi|148699199|gb|EDL31146.1| ring finger protein 183, isoform CRA_a [Mus musculus]
gi|148699200|gb|EDL31147.1| ring finger protein 183, isoform CRA_a [Mus musculus]
Length = 190
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+S +E ECP+CW FN + P VL C H+ C C+
Sbjct: 1 MSEPQGQELRAECPVCWNPFNNTFHTPKVLDCCHSFCVECL 41
>gi|312373660|gb|EFR21361.1| hypothetical protein AND_17140 [Anopheles darlingi]
Length = 1909
Score = 39.3 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
E L CP+C F P L CGHT+C+ C+ L
Sbjct: 59 EFLSCPVCCNEFAANSRPPISLGCGHTICRTCLATLH 95
>gi|62529020|gb|AAX84805.1| TRIM50 [Gorilla gorilla]
Length = 102
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
S++ E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SLLELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|308480139|ref|XP_003102277.1| hypothetical protein CRE_05896 [Caenorhabditis remanei]
gi|308262203|gb|EFP06156.1| hypothetical protein CRE_05896 [Caenorhabditis remanei]
Length = 1715
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 45 ECPICWESFNMV--ENVPYVLWCGHTLCKNCILGLQ 78
+C IC E F V P VL CGHT+C +C+ LQ
Sbjct: 1651 QCEICLEQFTDVAGNRAPKVLRCGHTICASCVNSLQ 1686
>gi|308464716|ref|XP_003094623.1| hypothetical protein CRE_30408 [Caenorhabditis remanei]
gi|308247172|gb|EFO91124.1| hypothetical protein CRE_30408 [Caenorhabditis remanei]
Length = 607
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+ C +C+E+FN P +L CGH C++CI L
Sbjct: 21 ITCEVCFEAFNHQTRPPKLLPCGHNFCESCIFSL 54
>gi|403366470|gb|EJY83038.1| Kelch motif family protein [Oxytricha trifallax]
Length = 1353
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 24/122 (19%)
Query: 43 SLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+++C +C +S++ +++P +L CGHTLC+ C+ + ++ CP C+
Sbjct: 2 NIQCSLCCQSYDKQQHLPRILIQCGHTLCELCLRNI-----------LKTDSVFDCPECD 50
Query: 102 ---------LLSFRVVYKGNLKFPRKNYFLLWMVE--SMNGDRVKSHSGFCEDRQPASSS 150
L S + + ++FP KN L+ + E +N +S S + +Q SS
Sbjct: 51 TVIIVEQDKLESQEQIEQAIMRFP-KNIALINIQEYGQLNLKNNQSKSDQIKTQQTQQSS 109
Query: 151 SG 152
SG
Sbjct: 110 SG 111
>gi|348543327|ref|XP_003459135.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Oreochromis
niloticus]
Length = 252
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E +EC IC+ ++N+ P VL C H LC C+ +K L P + CP+C
Sbjct: 23 EEMECKICYCAYNLGSRRPKVLECCHRLCSKCL-------IKILDLGESPPNALVCPFCR 75
Query: 102 LLS 104
L+
Sbjct: 76 YLT 78
>gi|291415671|ref|XP_002724074.1| PREDICTED: tripartite motif-containing 64 [Oryctolagus cuniculus]
Length = 450
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
D +++ ++ L CPIC F P + CGH C++C L L W + P
Sbjct: 2 DPATLQVFQQELTCPICMNFFL----DPVRIDCGHNFCRSC-LSLSWEEAETP------- 49
Query: 93 LFISCPWCNLLSFRVVYKGNL 113
+ CP C +S + +K N+
Sbjct: 50 --MCCPMCKEMSEKTNFKTNV 68
>gi|426362745|ref|XP_004048515.1| PREDICTED: RING finger protein 183 isoform 1 [Gorilla gorilla
gorilla]
gi|426362747|ref|XP_004048516.1| PREDICTED: RING finger protein 183 isoform 2 [Gorilla gorilla
gorilla]
Length = 192
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
RE ECP+CW FN + P +L C H+ C C+
Sbjct: 6 GRELEAECPVCWNPFNNTFHTPKMLNCCHSFCVECL 41
>gi|83767491|dbj|BAE57630.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1103
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 18 DSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
D L A E + V + S + LECPIC ++ VEN CGH+ C C
Sbjct: 728 DELDLIANAKEFDQEVVIRLKSNNDDLECPICMDA---VENPIIFFPCGHSTCAEC---- 780
Query: 78 QWAVVKFPTLPVQL----PLFISCPWC 100
++ + P+L V+ + + CP C
Sbjct: 781 -FSRISDPSLAVRQGHDGAVEVKCPNC 806
>gi|74137887|dbj|BAE24092.1| unnamed protein product [Mus musculus]
Length = 1130
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
L CPIC ++F+ P L CGHT+C+ C+ L F
Sbjct: 12 LSCPICTQTFDETIRKPISLGCGHTVCEMCLNKLHRKACPF 52
>gi|391867441|gb|EIT76687.1| helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box
superfamily [Aspergillus oryzae 3.042]
Length = 1197
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 18 DSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
D L A E + V + S + LECPIC ++ VEN CGH+ C C
Sbjct: 835 DELDLIANAKEFDQEVVIRLKSNNDDLECPICMDA---VENPIIFFPCGHSTCAEC---- 887
Query: 78 QWAVVKFPTLPVQL----PLFISCPWC 100
++ + P+L V+ + + CP C
Sbjct: 888 -FSRISDPSLAVRQGHDGAVEVKCPNC 913
>gi|336366153|gb|EGN94501.1| hypothetical protein SERLA73DRAFT_163062 [Serpula lacrymans var.
lacrymans S7.3]
Length = 603
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 19/76 (25%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC----N 101
C +C E ++ +N P+ + CGH+ C+ C+ L ++CP C
Sbjct: 10 CDVCLEGYSNGQNTPHAIVCGHSFCQGCLESL---------------TRLTCPLCRTRFE 54
Query: 102 LLSFRVVYKGNLKFPR 117
L R ++ + PR
Sbjct: 55 LQDVRKLHIDRGQTPR 70
>gi|317143698|ref|XP_001819632.2| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus oryzae RIB40]
Length = 1090
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 18 DSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
D L A E + V + S + LECPIC ++ VEN CGH+ C C
Sbjct: 728 DELDLIANAKEFDQEVVIRLKSNNDDLECPICMDA---VENPIIFFPCGHSTCAEC---- 780
Query: 78 QWAVVKFPTLPVQL----PLFISCPWC 100
++ + P+L V+ + + CP C
Sbjct: 781 -FSRISDPSLAVRQGHDGAVEVKCPNC 806
>gi|238487276|ref|XP_002374876.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus
flavus NRRL3357]
gi|220699755|gb|EED56094.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus
flavus NRRL3357]
Length = 1172
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 18 DSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
D L A E + V + S + LECPIC ++ VEN CGH+ C C
Sbjct: 810 DELDLIANAKEFDQEVVIRLKSNNDDLECPICMDA---VENPIIFFPCGHSTCAEC---- 862
Query: 78 QWAVVKFPTLPVQL----PLFISCPWC 100
++ + P+L V+ + + CP C
Sbjct: 863 -FSRISDPSLAVRQGHDGAVEVKCPNC 888
>gi|71896955|ref|NP_001026491.1| tripartite motif-containing protein 59 [Gallus gallus]
gi|82197903|sp|Q5ZMD4.1|TRI59_CHICK RecName: Full=Tripartite motif-containing protein 59
gi|53127452|emb|CAG31109.1| hypothetical protein RCJMB04_2h17 [Gallus gallus]
Length = 408
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L C IC+ F P VL C HT C++C+ G+ F P+++PL CP
Sbjct: 5 EEELTCSICYSLFED----PRVLPCSHTFCRSCLEGVIQLSSNFSIWRPLRVPL--KCPN 58
Query: 100 CNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGF--CED--RQP 146
C + + G P N+ L ++E R + HS C + RQP
Sbjct: 59 CRSI-VEIPASGTESLPI-NFALKAIIEKY---RQEDHSDVATCSEHYRQP 104
>gi|26354048|dbj|BAC40654.1| unnamed protein product [Mus musculus]
Length = 513
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + + + + A +SG S
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAA----EEAIGTSGES 123
>gi|335298570|ref|XP_003358332.1| PREDICTED: RING finger protein 222-like [Sus scrofa]
Length = 248
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECP+C+E +E L CGH C +C++ + + Q+ I CP C ++
Sbjct: 13 ECPVCYERLRDLEGAGRTLSCGHVFCHDCLVKYLLST----RVDGQVQRTIVCPVCRYVT 68
Query: 105 FRVVYKGNLKFPRK 118
F + K + ++P K
Sbjct: 69 F--LSKKSSRWPSK 80
>gi|291244525|ref|XP_002742146.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 690
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 13/61 (21%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPW 99
REE L C IC E ++ P +L C HT CK C++ L Q + + CP
Sbjct: 19 REEFLYCAICLERYSE----PKILPCHHTFCKKCLVQLTEK---------QAQMLLICPT 65
Query: 100 C 100
C
Sbjct: 66 C 66
>gi|148686553|gb|EDL18500.1| tripartite motif protein 23, isoform CRA_b [Mus musculus]
Length = 582
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 28/119 (23%)
Query: 42 ESLECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISC 97
+ LEC +C + F++ + VP +L CGHT+C +C+ +LPL I C
Sbjct: 35 QVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRC 80
Query: 98 PWCNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
P+ +V G+ +KN+ LL ++E + + + + A +SG S
Sbjct: 81 PF----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAA----EEAIGTSGES 131
>gi|348556129|ref|XP_003463875.1| PREDICTED: RING finger protein 183-like [Cavia porcellus]
Length = 199
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
RE ECP+CW FN + P +L C H+ C C+ L
Sbjct: 6 GRELEAECPVCWNPFNNTFHTPKLLDCCHSFCVECLAHL 44
>gi|393907757|gb|EFO27439.2| hypothetical protein LOAG_01045 [Loa loa]
Length = 592
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 3 NFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSRE-ESLECPICWESFNMVENVPY 61
NF + A N+ + +K S A + D + SV + E S+ C IC E F++ + +P
Sbjct: 8 NFKAYMDANNLKSRRRMIKTSSATN--LDKNEFSVKNAEYHSIRCEICSEPFHIRKRLPK 65
Query: 62 VLWCGHTLCKNCILGL 77
+L C H C+ CI L
Sbjct: 66 LLPCEHNFCEQCIFSL 81
>gi|297480904|ref|XP_002691745.1| PREDICTED: RING finger protein 224 [Bos taurus]
gi|358421560|ref|XP_003585017.1| PREDICTED: RING finger protein 224 [Bos taurus]
gi|296481990|tpg|DAA24105.1| TPA: hypothetical protein BOS_12229 [Bos taurus]
Length = 256
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+C +C+ ++++ ++P L+CGHT+C+ C+ L P ++ CP C
Sbjct: 122 DCIVCYSAYDLAGHLPRRLYCGHTVCQACVRRL--------ATPAPAQRWVPCPQCR 170
>gi|255720811|ref|XP_002545340.1| hypothetical protein CTRG_00121 [Candida tropicalis MYA-3404]
gi|240135829|gb|EER35382.1| hypothetical protein CTRG_00121 [Candida tropicalis MYA-3404]
Length = 1162
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 15 LKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNC 73
+K L+ SEA++ S + S ++++ CP+C+++ + ++ CGH +CK C
Sbjct: 841 IKAKVLELSEASTA-----TSLIQSEDDTISCPVCFDALDFESSILIFGECGHMICKTC 894
>gi|452820997|gb|EME28033.1| SWIM zinc finger family protein / mitogen-activated protein kinase
kinase kinase (MAPKKK)-related protein [Galdieria
sulphuraria]
Length = 290
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 37 VVSREESLECPICWESFNMVENVPYVLW----CGHTLCKNCILGLQWAVVKFPTLPVQLP 92
V REE+ ECPIC+E+F+ E +L+ CG+ + K+C +W+ K
Sbjct: 137 VPRREENTECPICFENFSTEEGAEPILYCKWGCGNAVHKDCF--DKWSCSKVEAGQEVTC 194
Query: 93 LFISCPW----------CNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
++ PW +LS R + K + R+N L+ S R K G +
Sbjct: 195 VYCRTPWEKTEGSKKETRQILSGRRLIKLRNPYEREN-ILIQRTLSSKLSRKKGRKGPSK 253
Query: 143 DRQPASSSSG 152
++ +S G
Sbjct: 254 VQRTKKTSKG 263
>gi|389581944|dbj|GAB64665.1| hypothetical protein PCYB_022350 [Plasmodium cynomolgi strain B]
Length = 1255
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
D+S S CPI + + +N PYVL CGH +CK+C+
Sbjct: 1184 DLSGCFFFHSSFTCPISRDKSSK-DNPPYVLRCGHAICKSCV 1224
>gi|221052457|ref|XP_002257804.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193807635|emb|CAQ38140.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1859
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
D+S S CPI + + +N PYVL CGH +CK+C+
Sbjct: 1788 DLSGCFFFHSSFTCPISRDKSSK-DNPPYVLRCGHAICKSCV 1828
>gi|268572891|ref|XP_002649071.1| Hypothetical protein CBG22559 [Caenorhabditis briggsae]
Length = 595
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+ C +C+E FN P +L CGH C++CI L + L +I CP C
Sbjct: 20 ITCEVCFEPFNHQTRPPKLLPCGHNFCESCIFSLCLHQEYY------LLDYIKCPTCR 71
>gi|321471264|gb|EFX82237.1| hypothetical protein DAPPUDRAFT_302642 [Daphnia pulex]
Length = 343
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 17/81 (20%)
Query: 20 LKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
+ S + S D+D++ V +C IC +N ++ P L C HTLC CI +
Sbjct: 1 MSISSSMSLDDDEDIAEFV------KCRICLREYNEIDRKPKFLPCSHTLCFECIYNISQ 54
Query: 80 AVVKFPTLPVQLPLFISCPWC 100
I+CP+C
Sbjct: 55 GYD-----------IITCPFC 64
>gi|125819455|ref|XP_001337479.1| PREDICTED: e3 ubiquitin-protein ligase RNF182-like [Danio rerio]
Length = 247
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 23 SEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVV 82
S+ + ++ + V+ E LEC IC+ F+ P VL C H +C C+ +V
Sbjct: 2 SQKSDSETEGSQAPVIYTVEELECKICYNRFDTRARKPKVLSCLHRVCAKCL----KKMV 57
Query: 83 KFPTLPVQLPLFISCPWCN 101
+ + P ISCP+C
Sbjct: 58 ELDSSPS----IISCPFCR 72
>gi|410905499|ref|XP_003966229.1| PREDICTED: E3 ubiquitin-protein ligase NHLRC1-like [Takifugu
rubripes]
Length = 431
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 12/59 (20%)
Query: 44 LECPICWESFNMVEN--VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
LEC +C+E F+ ++ P L CGH LC CI L V+K + CP+C
Sbjct: 26 LECKVCFEKFSTGQSGHRPQNLSCGHVLCLKCITSLSHPVLK----------RLECPFC 74
>gi|326525945|dbj|BAJ93149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 678
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 94
SS + R+ L C ICW F+ +L CGH C +CI G WA F V
Sbjct: 518 SSSMQRQAELSCVICWTDFSSSRG---ILPCGHRFCFSCIQG--WADCLFSRGKVS---- 568
Query: 95 ISCPWCN 101
+CP C
Sbjct: 569 -TCPLCK 574
>gi|432964136|ref|XP_004086871.1| PREDICTED: tripartite motif-containing protein 47-like [Oryzias
latipes]
Length = 511
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
S+ +L C IC E F +P + CGHT CKNCI L W + Q P+
Sbjct: 3 SQNSNLTCAICLERFR----IPVTIPCGHTFCKNCIT-LHWDSKRPSDAGPQCPM 52
>gi|440898478|gb|ELR49971.1| E3 ubiquitin-protein ligase RNF182 [Bos grunniens mutus]
Length = 249
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
AS+ ++ S VS E LEC IC+ +N+ + P VL C H +C C+ ++ F
Sbjct: 2 ASQLPEEAAESQVSDE--LECKICYNRYNLKQRKPKVLGCCHRVCAKCL----CKIINFG 55
Query: 86 TLPVQLPLFISCPWCN 101
P + I CP+C
Sbjct: 56 DSPHGV---IVCPFCR 68
>gi|125836979|ref|XP_001345555.1| PREDICTED: tripartite motif-containing protein 59-like [Danio
rerio]
Length = 344
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISC 97
S EE L C +C+ F P VL C HT CK+C+ + V F P++LPL C
Sbjct: 3 SLEEDLTCSVCYALFT----DPRVLPCSHTFCKSCLESVLQVSVNFSIWRPLRLPL--KC 56
Query: 98 PWCN 101
P C
Sbjct: 57 PNCR 60
>gi|428183382|gb|EKX52240.1| hypothetical protein GUITHDRAFT_102143 [Guillardia theta CCMP2712]
Length = 336
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 42 ESLECPICWESFNMVENVPYVLW-CGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E CPIC+E +N P +L+ CGHT C C+ ++L +CP+C
Sbjct: 101 EQATCPICYELMKAPKNTPTLLFPCGHTFCIQCL-----------NSHIKLNSRGTCPYC 149
Query: 101 NL 102
+
Sbjct: 150 RV 151
>gi|148686552|gb|EDL18499.1| tripartite motif protein 23, isoform CRA_a [Mus musculus]
Length = 602
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 57 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 102
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + + + + A +SG S
Sbjct: 103 ----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAA----EEAIGTSGES 151
>gi|241599212|ref|XP_002404840.1| zinc finger protein, putative [Ixodes scapularis]
gi|215500501|gb|EEC09995.1| zinc finger protein, putative [Ixodes scapularis]
Length = 197
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
SS++S E CPIC E F P + CGHT C C+ + K P
Sbjct: 11 TSSMISSTEEFVCPICLEIFQK----PVTISCGHTFCSTCLAQCKQDDPKCP 58
>gi|170064370|ref|XP_001867497.1| hypothetical protein CpipJ_CPIJ017096 [Culex quinquefasciatus]
gi|167881787|gb|EDS45170.1| hypothetical protein CpipJ_CPIJ017096 [Culex quinquefasciatus]
Length = 193
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 16/74 (21%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
ECPIC+ S V P VL C HT+C C + L + CP CN +
Sbjct: 43 ECPICFSS---VYEAPVVLNCEHTICGPCTKKV-------------LAKYKHCPICNTVL 86
Query: 105 FRVVYKGNLKFPRK 118
R ++ + + RK
Sbjct: 87 IRALFLNDTSYTRK 100
>gi|317418624|emb|CBN80662.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 467
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPV--QLPLFISCP 98
E++L CP+C + F P VL C H+ CK+C+ W P+ ++PL +S P
Sbjct: 6 EKNLSCPVCQDIFK----DPVVLSCSHSFCKDCVQTW-WTEKPIKECPLCKKIPL-LSDP 59
Query: 99 WCNLL 103
CNL+
Sbjct: 60 PCNLV 64
>gi|427781521|gb|JAA56212.1| Putative potassium channel modulatory factor-like protein
[Rhipicephalus pulchellus]
Length = 222
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFP 85
SS++S E CPIC E F P + CGHT C C+ + K P
Sbjct: 11 TSSMISNTEEFICPICLEIFQK----PVTISCGHTFCSGCLAQCKLDDPKCP 58
>gi|57997172|emb|CAI46182.1| hypothetical protein [Homo sapiens]
Length = 478
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|27881691|gb|AAH44642.1| RC3H2 protein [Homo sapiens]
Length = 506
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|169616922|ref|XP_001801876.1| hypothetical protein SNOG_11638 [Phaeosphaeria nodorum SN15]
gi|111060226|gb|EAT81346.1| hypothetical protein SNOG_11638 [Phaeosphaeria nodorum SN15]
Length = 1020
Score = 38.9 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
DDV + E+ ECPIC+E+ N ++ CGHT C C+ L
Sbjct: 639 DDVVGRLKAVEAFECPICFEA---DPNPTIIIPCGHTACGGCVQKL 681
>gi|213407964|ref|XP_002174753.1| RING finger domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212002800|gb|EEB08460.1| RING finger domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 453
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 18 DSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
D + +E A++ + +DV+ V SL CP+C E+F PY CGHT C C+
Sbjct: 58 DPAETAEVATKPTFEDVAGAV--RSSLTCPVCTETFFK----PYTTHCGHTYCYRCL 108
>gi|148233940|ref|NP_001085077.1| E3 ubiquitin-protein ligase RNF182 [Xenopus laevis]
gi|82236748|sp|Q6INB3.1|RN182_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|47940004|gb|AAH72370.1| MGC84499 protein [Xenopus laevis]
Length = 246
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
S+ S+D+ S + LEC IC+ +N+ + P VL C H +C C+ L
Sbjct: 2 TSQLSEDNSESPNLNSDELECKICYNRYNLRQRKPKVLGCCHRVCAKCLYKL 53
>gi|308487459|ref|XP_003105925.1| hypothetical protein CRE_19694 [Caenorhabditis remanei]
gi|308254981|gb|EFO98933.1| hypothetical protein CRE_19694 [Caenorhabditis remanei]
Length = 358
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 40 REESLECPICWESF--NMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISC 97
R L+C +C + ++ + +P +L CGHT+C C L + + ISC
Sbjct: 265 RYHDLKCTVCQLFYHESIKKRIPKMLSCGHTVCSGCAKML---------YKIDFNVCISC 315
Query: 98 PWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVK 135
P C + + Y N +KNY LL ++E + D+ K
Sbjct: 316 PICREET-DIDYNSNE--LKKNYALLGIIEEIKQDKKK 350
>gi|268560772|ref|XP_002646287.1| Hypothetical protein CBG11992 [Caenorhabditis briggsae]
Length = 437
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C IC E F+ ++P VL CGHT C++C+ +V + CP C S
Sbjct: 25 CSICMEEFDSNIHLPKVLKCGHTFCRSCLDKAISSVQVSHYGGGDVNTLFFCPLCR-RSE 83
Query: 106 RVVYKGNLKFPRKNYFLLWMVES 128
+ G FP N+ LL +V S
Sbjct: 84 EIPNTGASDFP-NNHQLLDVVAS 105
>gi|126327498|ref|XP_001368597.1| PREDICTED: e3 ubiquitin-protein ligase TRIM13 [Monodelphis
domestica]
Length = 408
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ L Q P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGNVR-NMLWRQSPF--KCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N +V C+
Sbjct: 58 R----KETAAAGVNSLQVNYSLKGIVEKYNKIKVSPKMPVCK 95
>gi|268531730|ref|XP_002630992.1| Hypothetical protein CBG02734 [Caenorhabditis briggsae]
Length = 247
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 44 LECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
+EC IC+ SF+ VP V+ CGHTLC+ C L +P + FI CP
Sbjct: 113 IECQICYASFDNKARVPRVIKECGHTLCQRCCQHLM--------IPNK-NQFIICPV--D 161
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKS 136
+ VY GN+ KN+ L+ ++ + KS
Sbjct: 162 RTSTAVY-GNINSLPKNFALIQLINESQVYKTKS 194
>gi|355726040|gb|AES08744.1| tripartite motif-containing 23 [Mustela putorius furo]
Length = 388
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|291384098|ref|XP_002708505.1| PREDICTED: tripartite motif-containing 64 [Oryctolagus cuniculus]
Length = 478
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
D +++ ++ L CPIC F P + CGH C++C L L W + P
Sbjct: 2 DPATLQVFQQELTCPICMNFFL----DPVRIDCGHNFCRSC-LSLSWEEAETP------- 49
Query: 93 LFISCPWCNLLSFRVVYKGNL 113
+ CP C +S + +K N+
Sbjct: 50 --MCCPMCKEMSEKTNFKTNV 68
>gi|193209612|ref|NP_001123114.1| Protein C28G1.5, isoform b [Caenorhabditis elegans]
gi|351049653|emb|CCD63334.1| Protein C28G1.5, isoform b [Caenorhabditis elegans]
Length = 302
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 45 ECPICWESFNMV--ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
+C IC++ F+ E++P L CGH LC CI A+V T + CP+C
Sbjct: 5 KCKICFDRFSDTDSEHIPRNLTCGHALCHKCI----TAMVNNST--------VECPFCRT 52
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVES 128
++ + ++ KN+ L+ ++E
Sbjct: 53 VTN--IVNNDITKLLKNFALIEVIED 76
>gi|115720426|ref|XP_001184300.1| PREDICTED: tripartite motif-containing 13-like
[Strongylocentrotus purpuratus]
Length = 332
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
ESL CP+C ++F P +L CGHT CK C+
Sbjct: 11 ESLACPLCLDAFK----APTLLACGHTFCKVCL 39
>gi|47220874|emb|CAG03081.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 20 LKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
LK A + C +D E EC IC++ +N + P +L C H +C C+L +
Sbjct: 13 LKMRSAQTRCEED-----CPPPEETECKICYQHYNAYKRKPKILDCLHRVCTQCLLQILD 67
Query: 80 AVVKFPTLPVQLPLFISCPWCN 101
+ FI CP+C
Sbjct: 68 V--------AEGAGFILCPFCR 81
>gi|293347402|ref|XP_001063645.2| PREDICTED: RING finger protein 183-like [Rattus norvegicus]
gi|293359292|ref|XP_575838.3| PREDICTED: RING finger protein 183-like [Rattus norvegicus]
Length = 190
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+E ECP+CW FN + P VL C H+ C C+
Sbjct: 7 QELKAECPVCWNPFNNTFHTPKVLDCCHSFCVECL 41
>gi|291395446|ref|XP_002714111.1| PREDICTED: ADP-ribosylation factor domain protein 1 [Oryctolagus
cuniculus]
Length = 574
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTELGDSGVWGLKKNFALLELLERLQ 103
>gi|148686554|gb|EDL18501.1| tripartite motif protein 23, isoform CRA_c [Mus musculus]
Length = 527
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 43 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 88
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + + + + A +SG S
Sbjct: 89 ----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAA----EEAIGTSGES 137
>gi|17505504|ref|NP_491737.1| Protein C06A5.8, isoform a [Caenorhabditis elegans]
gi|351065259|emb|CCD61219.1| Protein C06A5.8, isoform a [Caenorhabditis elegans]
Length = 283
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L+C +C ++N + L CGHT C CI +Q K+ ++ CP C
Sbjct: 33 EEFLKCQVCCTNYNETTKLARGLHCGHTFCTECIKTMQ----KYGN-----SAYLECPSC 83
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMV 126
R K ++ N+ ++ ++
Sbjct: 84 -----RAETKCDIAAVSTNFAIMELI 104
>gi|403222999|dbj|BAM41130.1| uncharacterized protein TOT_030000393 [Theileria orientalis strain
Shintoku]
Length = 1008
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 15 LKNDSLKASEAASECS-DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNC 73
++N+S+ SE D+ V S + R+ L CPIC E F P + CGHT C+ C
Sbjct: 388 IRNNSINVLIENSEKKLDEGVMSSILRD--LICPICLEYFYF----PVTVACGHTFCRYC 441
Query: 74 I 74
I
Sbjct: 442 I 442
>gi|440896262|gb|ELR48242.1| Tripartite motif-containing protein 34, partial [Bos grunniens
mutus]
Length = 839
Score = 38.5 bits (88), Expect = 2.7, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 19 SLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
S+ AS + + +++V++ +E + CPIC E P L CGH+ C+ CI
Sbjct: 340 SMAASGGSQGAAAMALNTVMNLQEEVSCPICRELLTE----PLSLGCGHSFCQTCI 391
>gi|58891532|gb|AAW83119.1| plenty of SH3s [Xenopus laevis]
Length = 826
Score = 38.5 bits (88), Expect = 2.7, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
LECP+C E + V L C HT CK C+LG+
Sbjct: 10 LECPVCLEGLDASAKV---LPCQHTFCKRCLLGI 40
>gi|74187601|dbj|BAE36743.1| unnamed protein product [Mus musculus]
Length = 252
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|395510378|ref|XP_003759454.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Sarcophilus
harrisii]
Length = 348
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 25/106 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCED 143
+V G+ +KN+ LL ++E + + + G ED
Sbjct: 75 ----DRQVTELGDSGVWGLKKNFALLELLERLQNGPIGQY-GTTED 115
>gi|417402910|gb|JAA48285.1| Putative e3 ubiquitin-protein ligase trim23 [Desmodus rotundus]
Length = 574
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 24/97 (24%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRV 134
+V G+ +KN+ LL ++E + V
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQNGHV 107
>gi|449278707|gb|EMC86498.1| GTP-binding protein ARD-1, partial [Columba livia]
Length = 547
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL + CP+
Sbjct: 2 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAVRCPF 47
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + +G C + A SG S
Sbjct: 48 ----DRQVTELGDSGVWGLKKNFALLELLERLQ----NGPAGQCGVAEEAIGLSGES 96
>gi|50761533|ref|XP_424752.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Gallus gallus]
Length = 578
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL + CP+
Sbjct: 33 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAVRCPF 78
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+V G+ +KN+ LL ++E + G C + A SG S
Sbjct: 79 ----DRQVTELGDSGVWGLKKNFALLELLERLQ----NGPPGQCGTAEEAIGLSGES 127
>gi|426238822|ref|XP_004013343.1| PREDICTED: uncharacterized protein LOC101120178 [Ovis aries]
Length = 289
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVL------WCGHTLCKNCILGLQWAVVKFPTL 87
+ S+ R E L+C IC+ FN+ + P L CGHTLC C+ L
Sbjct: 113 IPSLPERGE-LDCNICYRPFNLGDRAPRRLPGTARTRCGHTLCTACLRELAARGDGGGAA 171
Query: 88 P--VQLPLFISCPWCN 101
V+L ++CP+C
Sbjct: 172 ARVVRLRRLVTCPFCR 187
>gi|341891687|gb|EGT47622.1| hypothetical protein CAEBREN_02898 [Caenorhabditis brenneri]
Length = 488
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
+L CP+C+E F+ VP CGHT+C +C L+ + L++ CP C
Sbjct: 268 ALNCPVCFEMFD---GVPQSYPCGHTVCFSCSESLKGH---------EEVLWLRCPVCRK 315
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNR 162
+ V KNY L+ ++ S+ D + S + ++ S +S NQL +
Sbjct: 316 PADSTV---------KNYALINVLASL--DVLPSKEKVLQKVYDSTVSINASIKYNQLRK 364
Query: 163 GNHRR 167
N ++
Sbjct: 365 DNAKK 369
>gi|70943223|ref|XP_741684.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520218|emb|CAH77849.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 227
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
S CPI + + +N+PY+L CGH +CKNC+
Sbjct: 166 SFTCPISRDKSSK-DNMPYLLTCGHAICKNCV 196
>gi|291382777|ref|XP_002708100.1| PREDICTED: ring finger protein 183 [Oryctolagus cuniculus]
Length = 194
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
R ECP+CW FN + P VL C H+ C C+
Sbjct: 6 GRPLEAECPVCWNPFNNTFHTPKVLDCCHSFCVECL 41
>gi|30142677|ref|NP_839971.1| E3 ubiquitin-protein ligase TRIM50 [Mus musculus]
gi|56404870|sp|Q810I2.1|TRI50_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465646|gb|AAL91070.1| tripartite motif protein 50 [Mus musculus]
gi|148687424|gb|EDL19371.1| tripartite motif protein 50, isoform CRA_d [Mus musculus]
Length = 483
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+V ++ L+CPIC E F P +L CGH+ CK+C+ L
Sbjct: 6 TVPELQDQLQCPICLEVFKE----PLMLQCGHSYCKDCLDNL 43
>gi|120538363|gb|AAI30023.1| Tripartite motif-containing 50 [Mus musculus]
Length = 484
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+V ++ L+CPIC E F P +L CGH+ CK+C+ L
Sbjct: 6 TVPELQDQLQCPICLEVFKE----PLMLQCGHSYCKDCLDNL 43
>gi|118366589|ref|XP_001016510.1| hypothetical protein TTHERM_00188340 [Tetrahymena thermophila]
gi|89298277|gb|EAR96265.1| hypothetical protein TTHERM_00188340 [Tetrahymena thermophila
SB210]
Length = 336
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAV 81
LECPIC N + N P L CGHT C++C GL+ ++
Sbjct: 22 LECPICS---NFLHN-PLRLTCGHTFCQSCFEGLKASI 55
>gi|344231092|gb|EGV62974.1| hypothetical protein CANTEDRAFT_122579 [Candida tenuis ATCC
10573]
Length = 463
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 38 VSREESLECPICWESFNMVENVPYVLWCGHTLCKNCIL 75
V + + L+CPIC + F PY CGHT C+ C+L
Sbjct: 64 VGQTDHLQCPICQQPFFN----PYTTLCGHTFCRECVL 97
>gi|341892721|gb|EGT48656.1| hypothetical protein CAEBREN_03057 [Caenorhabditis brenneri]
Length = 603
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
++C IC E FN +P +L CGH C++CI L
Sbjct: 16 IKCEICHEPFNHQTRLPKLLPCGHNYCESCIFEL 49
>gi|308463859|ref|XP_003094200.1| hypothetical protein CRE_10622 [Caenorhabditis remanei]
gi|308248048|gb|EFO92000.1| hypothetical protein CRE_10622 [Caenorhabditis remanei]
Length = 239
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 44 LECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
+EC IC ++ ++ VP +L CGHT+C +C L + ++ CP+C +
Sbjct: 147 IECRICVTEYSDLK-VPRILKECGHTICHDCADVLLNRFNRH---------YMMCPFCQM 196
Query: 103 LSFRVVYKGNLKFPRKNYFLLWMVESMNGDR 133
++ V +GN +N+ ++ +++ N R
Sbjct: 197 IT---VVRGNANLLPRNFSMIEIIDERNKKR 224
>gi|390367870|ref|XP_003731345.1| PREDICTED: uncharacterized protein LOC100890954 [Strongylocentrotus
purpuratus]
Length = 621
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
+++LECP+C F P +L C HT CK C+ + + F P + L SCP C
Sbjct: 10 DQNLECPVCLSFFKE----PKILTCSHTFCKGCL----QSFLDFQ--PDEQKL--SCPVC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMN 130
+ VV G + + N + +VE +
Sbjct: 58 RKET--VVTDGEVSRLQTNLTVRALVEDVQ 85
>gi|66472544|ref|NP_001018439.1| tripartite motif-containing 13 [Danio rerio]
gi|82192762|sp|Q503I2.1|TRI13_DANRE RecName: Full=Tripartite motif-containing 13
gi|63100698|gb|AAH95319.1| Tripartite motif-containing 13 [Danio rerio]
Length = 404
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F P VL C H+ CK C+ G ++ P P F CP C
Sbjct: 5 EEDLTCPICCCLFE----DPRVLPCSHSFCKKCLEG----ILDGNRSPTWRPPF-KCPTC 55
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFC 141
V+ G + NY L +VE N RV C
Sbjct: 56 RK---ETVHNGIASL-QVNYSLRGIVEKYNRIRVMPRMSQC 92
>gi|390341815|ref|XP_003725534.1| PREDICTED: tripartite motif-containing protein 72-like
[Strongylocentrotus purpuratus]
Length = 356
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 12/60 (20%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
ESL CP+C ++F P +L CGHT CK C+ K+ T + F+ CP C
Sbjct: 3 ESLACPLCLDAFK----APTLLVCGHTFCKVCL-------DKYDTHH-RGQDFMECPVCK 50
>gi|156402802|ref|XP_001639779.1| predicted protein [Nematostella vectensis]
gi|156226909|gb|EDO47716.1| predicted protein [Nematostella vectensis]
Length = 264
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
E L+CPIC E++ P VL C HT C++C+ G+ + I CP C
Sbjct: 11 EHLLKCPICLETYR----TPKVLPCLHTFCQHCLKGMIQSGEN----------IIVCPTC 56
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGF---CEDRQPASS 149
V K + N+F+ M++ ++ S F CEDR ASS
Sbjct: 57 RCEV--CVPKEGVSALSTNFFINNMLDFLSVALSNSKPIFCTNCEDRNTASS 106
>gi|390459899|ref|XP_003732382.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Callithrix jacchus]
Length = 546
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|58865996|ref|NP_001012210.1| tripartite motif-containing 13 [Rattus norvegicus]
gi|81889127|sp|Q5M7V1.1|TRI13_RAT RecName: Full=Tripartite motif-containing 13; AltName:
Full=Putative tumor suppressor RFP2; AltName: Full=Ret
finger protein 2; AltName: Full=Tripartite
motif-containing protein 13
gi|56789535|gb|AAH88425.1| Tripartite motif-containing 13 [Rattus norvegicus]
gi|149030225|gb|EDL85281.1| rCG52074 [Rattus norvegicus]
Length = 407
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCED 143
+ + + NY L +VE N ++ C++
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCKE 96
>gi|34147266|ref|NP_899027.1| E3 ubiquitin-protein ligase RNF182 [Mus musculus]
gi|81898769|sp|Q8C432.1|RN182_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|26350311|dbj|BAC38795.1| unnamed protein product [Mus musculus]
gi|58476820|gb|AAH89488.1| Ring finger protein 182 [Mus musculus]
gi|148709051|gb|EDL40997.1| ring finger protein 182 [Mus musculus]
Length = 247
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
+ LEC IC+ +N+ + P VL C H +C C+ + ++ F P + I CP+C
Sbjct: 16 DELECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFGDSPQGV---IVCPFC 67
>gi|440896010|gb|ELR48052.1| Tripartite motif-containing protein 3, partial [Bos grunniens
mutus]
Length = 745
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 18/109 (16%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
L C IC + + P VL C HT C+ C+ +P Q L +SCP C
Sbjct: 21 LVCSICLDRYR----CPKVLPCLHTFCERCLQNY---------IPAQ-SLTLSCPVCRQT 66
Query: 104 SFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSG 152
S ++ + + + N+F+ ++E+M +H ED P S+++G
Sbjct: 67 S--ILPEQGVSALQNNFFISSLMEAMQQAPDGAHD--PEDPHPLSAAAG 111
>gi|90083094|dbj|BAE90629.1| unnamed protein product [Macaca fascicularis]
Length = 407
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|15208643|ref|NP_150231.1| E3 ubiquitin-protein ligase TRIM23 isoform gamma [Homo sapiens]
gi|395735866|ref|XP_003776655.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 isoform 2 [Pongo
abelii]
gi|12275887|gb|AAG50178.1|AF230399_1 tripartite motif protein TRIM23 gamma [Homo sapiens]
gi|119571736|gb|EAW51351.1| tripartite motif-containing 23, isoform CRA_c [Homo sapiens]
Length = 546
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|301781532|ref|XP_002926192.1| PREDICTED: hypothetical protein LOC100470133 [Ailuropoda
melanoleuca]
gi|281345336|gb|EFB20920.1| hypothetical protein PANDA_015799 [Ailuropoda melanoleuca]
Length = 150
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 15 LKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L+ +SL+ SE + ++ SR +C IC+ ++++ ++P L+CGHT C+ C+
Sbjct: 2 LQPESLRVSE--------EGTAAGSRRG--DCIICYSAYDLAGHLPRRLYCGHTFCQACV 51
Query: 75 LGLQWAVVKFPTLPVQLPLFISCPWCN 101
L P +I CP C
Sbjct: 52 RRLD--------APAPEQRWIPCPQCR 70
>gi|443687940|gb|ELT90768.1| hypothetical protein CAPTEDRAFT_49606, partial [Capitella teleta]
Length = 159
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW--AVVKFPTLPVQLPLFISCP 98
L C IC E+F + P +L C H+ CK C+L + + V PT + PL CP
Sbjct: 12 LTCSICMEAFGEGDRQPKLLPCHHSFCKQCLLQMARSHSFVDCPTCRERTPL--PCP 66
>gi|14009638|gb|AAK51689.1|AF302839_1 putative tumor suppressor LEU5/RFP2 [Mus musculus]
Length = 231
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|390370225|ref|XP_001186642.2| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like, partial
[Strongylocentrotus purpuratus]
Length = 415
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCI--LGLQWAVVKFP 85
LEC +C + F++ + VP +L CGHTLC C+ L LQ + P
Sbjct: 2 LECRVCEDIFSLQGDKVPRLLLCGHTLCHECLSRLTLQGRAILCP 46
>gi|426219677|ref|XP_004004045.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 183 [Ovis
aries]
Length = 179
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAV 81
ECP+CW FN + P VL C H+ C C+ + A
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECLAHISLAT 46
>gi|47228454|emb|CAG05274.1| unnamed protein product [Tetraodon nigroviridis]
Length = 625
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 27/109 (24%)
Query: 42 ESLECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISC 97
+ LEC +C + F++ + VP +L CGHT+C +C+ +LPL + C
Sbjct: 2 QVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAVRC 47
Query: 98 PWCNLLSFRVVYKGNLKF--PRKNYFLLWMVESM-NGDRVKSHSGFCED 143
P+ +V G+ +KN+ LL ++E + NG + SG +D
Sbjct: 48 PF----DRQVTELGDSGVWGLKKNFALLELLERLQNG--ATNQSGVADD 90
>gi|341895829|gb|EGT51764.1| hypothetical protein CAEBREN_14803 [Caenorhabditis brenneri]
Length = 591
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 40 REESLECPICWESF-NMVENVPYVLW-CGHTLCKNCILGL 77
++ ECPIC+E+F P VL CGHTLC +C+L +
Sbjct: 124 QQNPFECPICFETFTEQGGQTPIVLGKCGHTLCFDCVLKI 163
>gi|66826523|ref|XP_646616.1| hypothetical protein DDB_G0270206 [Dictyostelium discoideum AX4]
gi|60474516|gb|EAL72453.1| hypothetical protein DDB_G0270206 [Dictyostelium discoideum AX4]
Length = 1154
Score = 38.5 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 16 KNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCIL 75
+ + LK E+ + + +++ ++ ++ CPIC+E + +VL CGH CKNC++
Sbjct: 1082 EKEKLKRFESQIKTTKNEIDNI---DQDKICPICFE-----DEKDHVLNCGHRFCKNCVV 1133
Query: 76 GLQWAVVKFPTLPVQLPLFISCPWC 100
+ ISCP C
Sbjct: 1134 DNK---------------LISCPLC 1143
>gi|345316072|ref|XP_001518842.2| PREDICTED: E3 ubiquitin-protein ligase TRIM21-like [Ornithorhynchus
anatinus]
Length = 273
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 13/65 (20%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E + CPIC + FN P L CGHT C +CI ++W + SCP C
Sbjct: 7 EEVTCPICLDYFNY----PISLGCGHTFCSHCI--IRWVGRTEQSC-------FSCPECR 53
Query: 102 LLSFR 106
+S R
Sbjct: 54 RISHR 58
>gi|148237892|ref|NP_001086824.1| tripartite motif containing 23 [Xenopus laevis]
gi|50415349|gb|AAH77512.1| Trim23-prov protein [Xenopus laevis]
Length = 588
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 43 LECGVCEDIFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 88
Query: 100 CNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSS 154
+ + + G +KN+ LL ++E + S C + A SG S
Sbjct: 89 -DRQATELGDSGVWGL-KKNFALLELLERLQ----NGASSQCSTVEEAIGGSGES 137
>gi|224060947|ref|XP_002198657.1| PREDICTED: tripartite motif-containing protein 59 [Taeniopygia
guttata]
Length = 386
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
EE L CPIC ++F+ P VL C HT C C+ GL
Sbjct: 5 EEELTCPICCDTFSE----PQVLPCSHTFCGPCLPGL 37
>gi|403349782|gb|EJY74333.1| Kelch motif family protein [Oxytricha trifallax]
Length = 599
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL-QWAVVKFP-----------TLP 88
E EC +C++++N E P L CGHT C C+ + + +++K P LP
Sbjct: 2 ESIFECGVCFKTYNHSEKKPLSLPCGHTFCLECLKQINKHSIIKCPFDKIAHHTIAENLP 61
Query: 89 VQLPLFISCP 98
V + + P
Sbjct: 62 VNYAVLTALP 71
>gi|365222866|gb|AEW69785.1| Hop-interacting protein THI012 [Solanum lycopersicum]
Length = 446
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 16/146 (10%)
Query: 23 SEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVV 82
S + S+ DD S VS E C IC++ +E V CGH +C +C+L L
Sbjct: 300 SPSQSDAGMDDNMSEVSDTEV--CCICFDQLCTIE----VQDCGHQMCAHCVLALCCHNK 353
Query: 83 KFPTLPVQLPLFISCPWC--NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGF 140
PT P CP+C N++ + + KN + S + + F
Sbjct: 354 PNPT--TTSPPEPVCPFCRSNIVQLQAIKV------TKNNDTDSDLHSSKLRKTRRSRNF 405
Query: 141 CEDRQPASSSSGSSTFGNQLNRGNHR 166
E S S+FG RG+ R
Sbjct: 406 SEGSSSFKGLSAVSSFGKMTGRGSGR 431
>gi|357456381|ref|XP_003598471.1| A subunit of NADH dehydrogenase [Medicago truncatula]
gi|355487519|gb|AES68722.1| A subunit of NADH dehydrogenase [Medicago truncatula]
Length = 1819
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N E VP +L CGH CK C+ + ++CP C +S
Sbjct: 6 CSVCQTRYNEEERVPLLLQCGHGFCKECLSRM---------FSSSSDANLTCPRCRHVS- 55
Query: 106 RVVYKGNLKFPRKNYFLLWMV 126
+++ RKNY +L ++
Sbjct: 56 --TVGNSVQALRKNYAVLSLI 74
>gi|348540541|ref|XP_003457746.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Oreochromis
niloticus]
Length = 373
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 94
S+V E LEC IC+ ++ P +L C H +C C+ K + P
Sbjct: 123 QSLVYTLEELECKICYNRYDTRSRKPKLLGCLHRVCAKCL-------KKMVDMGESSPSI 175
Query: 95 ISCPWCN 101
ISCP+C
Sbjct: 176 ISCPFCR 182
>gi|354491683|ref|XP_003507984.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Cricetulus griseus]
gi|344247411|gb|EGW03515.1| GTP-binding protein ARD-1 [Cricetulus griseus]
Length = 574
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|395530034|ref|XP_003767105.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Sarcophilus
harrisii]
Length = 408
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ L Q P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGNVR-NMLWRQSPF--KCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N +V C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKVSPKMPVCK 95
>gi|390332516|ref|XP_796010.3| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like
[Strongylocentrotus purpuratus]
Length = 571
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCI--LGLQWAVVKFP 85
LEC +C + F++ + VP +L CGHTLC C+ L LQ + P
Sbjct: 25 LECRVCEDIFSLQGDKVPRLLLCGHTLCHECLSRLTLQGRAILCP 69
>gi|351700376|gb|EHB03295.1| RING finger protein 183 [Heterocephalus glaber]
Length = 192
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
R ECP+CW FN + P VL C H+ C C+
Sbjct: 6 GRALEAECPVCWNPFNNTFHTPKVLDCCHSFCVECL 41
>gi|335303973|ref|XP_003134061.2| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like isoform 1 [Sus
scrofa]
Length = 574
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|62529026|gb|AAX84808.1| TRIM50 [Pan troglodytes]
Length = 102
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
S+ E+ L+CPIC E F P +L CGH+ CK C++ L +
Sbjct: 6 SLPELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSLSY 45
>gi|209876470|ref|XP_002139677.1| FHA domain-containing protein [Cryptosporidium muris RN66]
gi|209555283|gb|EEA05328.1| FHA domain-containing protein [Cryptosporidium muris RN66]
Length = 902
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
++DD++ V E L CP+C + F + +P CGHT C+ CI
Sbjct: 71 NNDDIAKKVMSE--LTCPVCLDRFCLPVTIP----CGHTFCRYCI 109
>gi|338718823|ref|XP_001492817.2| PREDICTED: e3 ubiquitin-protein ligase TRIM23 [Equus caballus]
Length = 570
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|71027673|ref|XP_763480.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350433|gb|EAN31197.1| hypothetical protein, conserved [Theileria parva]
Length = 1008
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 10 AGNVGLKNDSLKASEAASECS-DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHT 68
A N ++N+S+ SE D+ V S + R+ L CPIC E F P + CGHT
Sbjct: 362 AKNDLVRNNSINVLIENSEKKFDEGVMSSILRD--LICPICLEYFYF----PVTVACGHT 415
Query: 69 LCKNCI 74
C+ CI
Sbjct: 416 FCRYCI 421
>gi|157819757|ref|NP_001102587.1| E3 ubiquitin-protein ligase RNF182 [Rattus norvegicus]
gi|300681097|sp|D3ZBM4.1|RN182_RAT RecName: Full=E3 ubiquitin-protein ligase RNF182; AltName:
Full=RING finger protein 182
gi|149045107|gb|EDL98193.1| rCG63350 [Rattus norvegicus]
Length = 247
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
+ LEC IC+ +N+ + P VL C H +C C+ + ++ F P + I CP+C
Sbjct: 16 DELECKICYNRYNLKQRKPKVLECCHRVCAKCL----YKIIDFGDSPQGV---IVCPFC 67
>gi|12407425|gb|AAG53501.1|AF220128_1 tripartite motif protein TRIM13 beta [Homo sapiens]
Length = 175
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|390335759|ref|XP_003724215.1| PREDICTED: uncharacterized protein LOC590474 [Strongylocentrotus
purpuratus]
Length = 813
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
LECP+C E F P +L C HTLC C+
Sbjct: 9 LECPMCLELFTSSSRKPKLLPCQHTLCLECM 39
>gi|62529024|gb|AAX84807.1| TRIM50 [Pan troglodytes]
Length = 102
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQW 79
S+ E+ L+CPIC E F P +L CGH+ CK C++ L +
Sbjct: 6 SLPELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSLSY 45
>gi|301767844|ref|XP_002919347.1| PREDICTED: GTP-binding protein ARD-1-like [Ailuropoda melanoleuca]
Length = 583
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|260800768|ref|XP_002595269.1| hypothetical protein BRAFLDRAFT_181904 [Branchiostoma floridae]
gi|260836143|ref|XP_002613066.1| hypothetical protein BRAFLDRAFT_191808 [Branchiostoma floridae]
gi|229280513|gb|EEN51281.1| hypothetical protein BRAFLDRAFT_181904 [Branchiostoma floridae]
gi|229298449|gb|EEN69075.1| hypothetical protein BRAFLDRAFT_191808 [Branchiostoma floridae]
Length = 59
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCIL 75
REE L C IC+E+F P +L C HT C+ C+L
Sbjct: 4 REEFLSCQICFETFRQ----PKILPCVHTFCERCLL 35
>gi|405962355|gb|EKC28045.1| Tripartite motif-containing protein 3 [Crassostrea gigas]
Length = 504
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
+ + + + + +C IC +SF P +L C HT CK C+LG Q
Sbjct: 2 ETTVIQTNDNGRQCSICLDSFR----CPKILPCKHTFCKRCVLGYQ 43
>gi|350579806|ref|XP_003480687.1| PREDICTED: RING finger protein 224-like [Sus scrofa]
Length = 192
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 24/119 (20%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
+C IC+ ++++ ++P L+CGHT C+ C+ L P +I CP C
Sbjct: 57 DCIICYSAYDLAGHLPRRLYCGHTFCQACVRRL--------DAPAHEQRWILCPQC---- 104
Query: 105 FRVVYKGNLKFPRKNYFLLWM----VESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQ 159
+ + PR +L + ++ +R S + E + P SGS+T Q
Sbjct: 105 -----RQSTPTPRGGVAMLDLDLAAFLAIKAEREPSRT---EPQSPMPLKSGSATITQQ 155
>gi|348532343|ref|XP_003453666.1| PREDICTED: RING finger protein 224-like [Oreochromis niloticus]
Length = 186
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPW 99
R + L C +C+ S+++V+ +P L CGHT C+ C+ L + + ++I CP
Sbjct: 35 RRQDLVCIVCFGSYDLVKRLPRRLHCGHTFCQACLKRLNTVINE--------QVWIPCPQ 86
Query: 100 CN 101
C
Sbjct: 87 CR 88
>gi|344272587|ref|XP_003408113.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like [Loxodonta
africana]
Length = 569
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|326524095|dbj|BAJ97058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 34 VSSVVSREESLECPICWES-FNMVENVPYVLWCGHTLCKNCILG 76
+S + + SL CPIC ++ FN PY L CGH CK C G
Sbjct: 224 ISETMKYDYSLTCPICLDTIFN-----PYALSCGHLFCKGCACG 262
>gi|395825390|ref|XP_003785918.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Otolemur garnettii]
Length = 574
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|348583553|ref|XP_003477537.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13-like [Cavia
porcellus]
Length = 407
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|335303975|ref|XP_003359838.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23-like isoform 2 [Sus
scrofa]
Length = 569
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|308463895|ref|XP_003094218.1| hypothetical protein CRE_10629 [Caenorhabditis remanei]
gi|308248066|gb|EFO92018.1| hypothetical protein CRE_10629 [Caenorhabditis remanei]
Length = 336
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
++ ++ EC IC ++ + CGHT+C+ C L +F T +
Sbjct: 245 NMEQLIKTTSGCECKICLVEYSTTRIPRMLRGCGHTICEECAGQLLKNGTRFTTYNIA-S 303
Query: 93 LFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMV 126
I CP+C ++ V +G ++ KNY L+ ++
Sbjct: 304 RSIRCPFCRKIT---VVQGTVQQMPKNYDLMEVI 334
>gi|410916359|ref|XP_003971654.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Takifugu
rubripes]
Length = 552
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCP 98
E+ C +C F+++E+ P + CGHT C+ CI L W P+ P L F CP
Sbjct: 7 EDPFSCYVC---FHLLED-PVTIPCGHTYCRRCITHL-WDRQPVPSCPQCLQSFSPCP 59
>gi|432931248|ref|XP_004081623.1| PREDICTED: tripartite motif-containing 13-like [Oryzias latipes]
Length = 393
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 21/106 (19%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNC----ILGLQWAVVKFPTLPVQLPLFIS 96
EE L CPIC F P VL C H+ CK C + G + V + P +
Sbjct: 9 EEELTCPICCSLFE----DPRVLLCSHSFCKKCLEALVEGNRGVVFRNP---------LK 55
Query: 97 CPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
CP C + + NY L +VE + +VK + C+
Sbjct: 56 CPTCR----KETPHNGANSLQVNYSLRGIVEKYSKLKVKPRNSVCK 97
>gi|17539210|ref|NP_500203.1| Protein C45G7.4 [Caenorhabditis elegans]
gi|351058164|emb|CCD65532.1| Protein C45G7.4 [Caenorhabditis elegans]
Length = 603
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
+ C +C+E FN P +L CGH C++CI L
Sbjct: 22 ITCEVCFEVFNHENRPPKLLPCGHNFCESCIFSL 55
>gi|302393777|sp|P36407.2|TRI23_RAT RecName: Full=E3 ubiquitin-protein ligase TRIM23; AltName:
Full=ADP-ribosylation factor domain-containing protein
1; AltName: Full=GTP-binding protein ARD-1; AltName:
Full=Tripartite motif-containing protein 23
Length = 573
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|351699839|gb|EHB02758.1| GTP-binding protein ARD-1 [Heterocephalus glaber]
Length = 574
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|340383447|ref|XP_003390229.1| PREDICTED: hypothetical protein LOC100641189, partial [Amphimedon
queenslandica]
Length = 600
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L C IC E F P +L C H+ C++C+ GL V K T +ISCP C
Sbjct: 14 EEQLTCLICLEHFTN----PKILPCHHSFCEHCLEGLSR-VKKNGT------YYISCPTC 62
Query: 101 NLLSFRVVYKGNLKFP 116
S + G FP
Sbjct: 63 R-RSIELPKGGAGAFP 77
>gi|260825464|ref|XP_002607686.1| hypothetical protein BRAFLDRAFT_82868 [Branchiostoma floridae]
gi|229293035|gb|EEN63696.1| hypothetical protein BRAFLDRAFT_82868 [Branchiostoma floridae]
Length = 867
Score = 38.1 bits (87), Expect = 3.6, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 20/119 (16%)
Query: 19 SLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
S++ S++ E D + S +S + LEC IC E F P VL C HT C+ C+
Sbjct: 9 SVQGSKSKEETKADAILSKIS-GDFLECTICLEPFKD----PKVLPCLHTFCEGCL---- 59
Query: 79 WAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSH 137
KF F CP C + V+ KG + + N+F V+S++ D +++H
Sbjct: 60 ---KKFIAQDKVKNKF-QCPTCR--TDTVLPKGGVSKLKNNFF----VQSLS-DTIETH 107
>gi|449449266|ref|XP_004142386.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Cucumis sativus]
Length = 1612
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N + VP +L CGH C +C+ + A +SCP C +S
Sbjct: 6 CSVCQNRYNEEDRVPLLLHCGHGFCADCMSRMFLASSDS---------RLSCPRCRYVS- 55
Query: 106 RVVYKGNLKFPRKNYFLLWMVES 128
V +++ RKN+ +L ++ S
Sbjct: 56 --VVGNSIQALRKNFAVLALIHS 76
>gi|4502197|ref|NP_001647.1| E3 ubiquitin-protein ligase TRIM23 isoform alpha [Homo sapiens]
gi|386780750|ref|NP_001247520.1| tripartite motif containing 23 [Macaca mulatta]
gi|114600014|ref|XP_001163376.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 isoform 3 [Pan
troglodytes]
gi|332233700|ref|XP_003266041.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Nomascus leucogenys]
gi|397514415|ref|XP_003827483.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Pan paniscus]
gi|402871691|ref|XP_003899787.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Papio anubis]
gi|543839|sp|P36406.1|TRI23_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM23; AltName:
Full=ADP-ribosylation factor domain-containing protein
1; AltName: Full=GTP-binding protein ARD-1; AltName:
Full=RING finger protein 46; AltName: Full=Tripartite
motif-containing protein 23
gi|12275883|gb|AAG50176.1|AF230397_1 tripartite motif protein TRIM23 alpha [Homo sapiens]
gi|292070|gb|AAA35940.1| nucleotide binding protein [Homo sapiens]
gi|18490296|gb|AAH22510.1| Tripartite motif-containing 23 [Homo sapiens]
gi|119571734|gb|EAW51349.1| tripartite motif-containing 23, isoform CRA_a [Homo sapiens]
gi|123993941|gb|ABM84572.1| tripartite motif-containing 23 [synthetic construct]
gi|123997817|gb|ABM86510.1| tripartite motif-containing 23 [synthetic construct]
gi|168277720|dbj|BAG10838.1| tripartite motif-containing protein 23 [synthetic construct]
gi|355691350|gb|EHH26535.1| E3 ubiquitin-protein ligase TRIM23 [Macaca mulatta]
gi|355749956|gb|EHH54294.1| E3 ubiquitin-protein ligase TRIM23 [Macaca fascicularis]
gi|380812558|gb|AFE78153.1| E3 ubiquitin-protein ligase TRIM23 isoform alpha [Macaca mulatta]
gi|383418191|gb|AFH32309.1| E3 ubiquitin-protein ligase TRIM23 isoform alpha [Macaca mulatta]
gi|410211944|gb|JAA03191.1| tripartite motif containing 23 [Pan troglodytes]
gi|410248320|gb|JAA12127.1| tripartite motif containing 23 [Pan troglodytes]
gi|410299036|gb|JAA28118.1| tripartite motif containing 23 [Pan troglodytes]
gi|410332599|gb|JAA35246.1| tripartite motif containing 23 [Pan troglodytes]
Length = 574
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|403267443|ref|XP_003925842.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 [Saimiri boliviensis
boliviensis]
Length = 574
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|449681015|ref|XP_002158024.2| PREDICTED: roquin-like [Hydra magnipapillata]
Length = 828
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
CP+C F P L CGH++CK+C+L L F ++
Sbjct: 14 CPVCQNEFKSGLKPPISLGCGHSICKSCLLRLSKQQCPFDQAEIK 58
>gi|395735864|ref|XP_002815650.2| PREDICTED: E3 ubiquitin-protein ligase TRIM23 isoform 1 [Pongo
abelii]
Length = 569
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|260825466|ref|XP_002607687.1| hypothetical protein BRAFLDRAFT_82867 [Branchiostoma floridae]
gi|229293036|gb|EEN63697.1| hypothetical protein BRAFLDRAFT_82867 [Branchiostoma floridae]
Length = 862
Score = 38.1 bits (87), Expect = 3.7, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 20/122 (16%)
Query: 16 KNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCIL 75
K+ +++A E D + S +S + LEC IC E F P VL C HT C+ C+
Sbjct: 5 KSSEPTGAKSAGETKTDAILSKIS-GDFLECTICLEPFKD----PKVLPCLHTFCEGCL- 58
Query: 76 GLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVK 135
KF F+ CP C + ++ KG + + N+F V+S++ D V+
Sbjct: 59 ------KKFVAQDKVKNKFL-CPTCRTET--ILPKGGVASFKNNFF----VQSLS-DTVQ 104
Query: 136 SH 137
+H
Sbjct: 105 TH 106
>gi|325187344|emb|CCA21882.1| RMD5 family protein putative [Albugo laibachii Nc14]
Length = 404
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAV----VKFPTLPVQLPLF 94
CP+ E + EN P +L CGH +C++C+ + + V K PT P+ LF
Sbjct: 346 CPVSKEE-STPENPPVLLKCGHVICRSCVKRISFNVPSEKFKCPTCPMDQTLF 397
>gi|15208641|ref|NP_150230.1| E3 ubiquitin-protein ligase TRIM23 isoform beta [Homo sapiens]
gi|12275885|gb|AAG50177.1|AF230398_1 tripartite motif protein TRIM23 beta [Homo sapiens]
gi|119571735|gb|EAW51350.1| tripartite motif-containing 23, isoform CRA_b [Homo sapiens]
Length = 569
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|260795081|ref|XP_002592535.1| hypothetical protein BRAFLDRAFT_69052 [Branchiostoma floridae]
gi|229277755|gb|EEN48546.1| hypothetical protein BRAFLDRAFT_69052 [Branchiostoma floridae]
Length = 279
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 34 VSSVVSR--EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWA-VVKFPTLPVQ 90
S+V+++ +E + C IC+E++N P VL C HT C +C+ L + K P
Sbjct: 25 TSTVLNKISDEMIVCNICFETYNR----PKVLPCLHTFCMDCLARLTASKTAKSPKGK-- 78
Query: 91 LPLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHS 138
++CP C + + K +K R N+F+ + + ++ +R ++ +
Sbjct: 79 ----LTCPMCREET--PLPKNGVKGLRDNFFVSNLCQILHAERERTRN 120
>gi|449487126|ref|XP_004157504.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
KEG-like [Cucumis sativus]
Length = 1612
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105
C +C +N + VP +L CGH C +C+ + A +SCP C +S
Sbjct: 6 CSVCQNRYNEEDRVPLLLHCGHGFCADCMSRMFLASSDS---------RLSCPRCRYVS- 55
Query: 106 RVVYKGNLKFPRKNYFLLWMVES 128
V +++ RKN+ +L ++ S
Sbjct: 56 --VVGNSIQALRKNFAVLALIHS 76
>gi|384496262|gb|EIE86753.1| hypothetical protein RO3G_11464 [Rhizopus delemar RA 99-880]
Length = 431
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 29/106 (27%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
LEC IC F + P CGHT CKNC++ L +CP+C
Sbjct: 25 LECAICCTRFTLPTTTP----CGHTFCKNCLVR-------------SLDHQHACPFC--- 64
Query: 104 SFRVVYKGNLKF-PRKNYFLLWMVESMNGDRVKSHSGF--CEDRQP 146
+ L F P N L +++ M G+ +S G +DR P
Sbjct: 65 ------RDPLDFCPPPNQLLSAVIQQMFGEDEESADGLDPSDDRIP 104
>gi|85000851|ref|XP_955144.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303290|emb|CAI75668.1| hypothetical protein, conserved [Theileria annulata]
Length = 1007
Score = 38.1 bits (87), Expect = 3.9, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 10 AGNVGLKNDSLKA-SEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHT 68
A N ++N+S+ E + + D+ V S + R+ L CPIC E F P + CGHT
Sbjct: 362 AKNDLVRNNSINVLIENSDKKLDEGVMSSILRD--LICPICLEYFYF----PVTVACGHT 415
Query: 69 LCKNCI 74
C+ CI
Sbjct: 416 FCRYCI 421
>gi|444521177|gb|ELV13118.1| RING finger protein 224 [Tupaia chinensis]
Length = 148
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+C IC+ ++++ ++P L+CGHT C+ C+ L TL V +I CP C
Sbjct: 19 DCTICYSAYDLARHLPRRLYCGHTFCQTCVRQLD-------TL-VHQQRWIPCPQCR 67
>gi|148231629|ref|NP_001087361.1| ring finger protein 182 [Xenopus laevis]
gi|51593523|gb|AAH78617.1| MGC85578 protein [Xenopus laevis]
Length = 246
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 30 SDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
++D+ S E LEC IC+ +N+ + P VL C H +C C+ L
Sbjct: 6 TEDNSESPNLNSEELECKICYNRYNLRQRKPKVLGCCHRVCAKCLYKL 53
>gi|17553362|ref|NP_497169.1| Protein F40G9.14 [Caenorhabditis elegans]
gi|351062899|emb|CCD70936.1| Protein F40G9.14 [Caenorhabditis elegans]
Length = 261
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 13/69 (18%)
Query: 45 ECPICWESFNMVEN-VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
EC IC+E + + N P V CGHT C++CI Q +F I CP+C
Sbjct: 137 ECKICFEKYEVTGNRSPRVFNCGHTYCESCI---QVCKHQFQ---------IKCPFCTTT 184
Query: 104 SFRVVYKGN 112
S+++ + N
Sbjct: 185 SYQINFSTN 193
>gi|12855490|dbj|BAB30354.1| unnamed protein product [Mus musculus]
Length = 389
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
EE L CPIC+ F P VL C HT C+NC+
Sbjct: 5 EEELTCPICYSIFED----PRVLPCSHTFCRNCL 34
>gi|341891698|gb|EGT47633.1| hypothetical protein CAEBREN_00431 [Caenorhabditis brenneri]
Length = 371
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
S EC IC F VP VL CGHT C C+
Sbjct: 29 STECSICLNQFGSTSFVPKVLECGHTFCMECL 60
>gi|326509579|dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525537|dbj|BAJ88815.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532854|dbj|BAJ89272.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 23 SEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVV 82
S++A + S + V V +E CP+CW + P CGH C NCI
Sbjct: 132 SKSAGKTSKEPVK-VTPKEPIFTCPVCWNKLDE----PATTMCGHIFCTNCIKQAIQFQK 186
Query: 83 KFPT 86
K PT
Sbjct: 187 KCPT 190
>gi|158286254|ref|XP_308645.4| AGAP007114-PA [Anopheles gambiae str. PEST]
gi|157020380|gb|EAA04070.5| AGAP007114-PA [Anopheles gambiae str. PEST]
Length = 1405
Score = 38.1 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQ 78
E L CP+C F P L CGHT+C+ C+ L
Sbjct: 10 EFLSCPVCCNEFAANLRPPISLGCGHTICRTCLATLH 46
>gi|402902048|ref|XP_003913941.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 3 [Papio
anubis]
Length = 409
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 8 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 98
>gi|328859309|gb|EGG08418.1| hypothetical protein MELLADRAFT_115940 [Melampsora larici-populina
98AG31]
Length = 253
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWA 80
E L CP+C++ E V L CGHT C+NCI WA
Sbjct: 128 ECLTCPLCYDGLERSEAV--SLGCGHTFCQNCIES--WA 162
>gi|297278120|ref|XP_001102271.2| PREDICTED: hypothetical protein LOC713074 [Macaca mulatta]
Length = 457
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 94
S ++S +EC IC SF+ V +P L CGH C C+ L A
Sbjct: 42 SPILSPASPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNA------- 94
Query: 95 ISCPWCNLLSFRVVYKGNLKFPRKNYFL 122
++CP C + +G P ++ L
Sbjct: 95 VACPVCRAPTRLAPRRGLPALPTQSGLL 122
>gi|126315320|ref|XP_001366644.1| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Monodelphis
domestica]
Length = 574
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|426252215|ref|XP_004019811.1| PREDICTED: tripartite motif-containing protein 64-like [Ovis aries]
Length = 450
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 33 DVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLP 92
D ++ + + L C IC F P + CGH+ C+ C L L W + P
Sbjct: 2 DSDTLEAFQSELTCSICMNCFL----DPVTIDCGHSFCRPC-LSLCWEEGQTPR------ 50
Query: 93 LFISCPWCNLLSFRVVYKGNLKFPR 117
SCP C LS R +K N+ R
Sbjct: 51 ---SCPECRGLSERPDFKTNIALKR 72
>gi|341893620|gb|EGT49555.1| hypothetical protein CAEBREN_19997 [Caenorhabditis brenneri]
Length = 104
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 11 GNVGLKNDSLKASEAASECSDDDVSS---VVSREESLECPICWESFNMV--ENVPYVLWC 65
G + L +L+ + SE + + V+ ECPIC++ + E VP VL C
Sbjct: 22 GELELMKQALQCAIFESERRERTIKGLLNVMPPRPVYECPICFDGYETEGGEQVPRVLKC 81
Query: 66 GHTLCKNCIL 75
GHT C+ CI+
Sbjct: 82 GHTACELCIV 91
>gi|335280806|ref|XP_003353663.1| PREDICTED: RING finger protein 183-like isoform 2 [Sus scrofa]
Length = 245
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCI 74
ECP+CW FN + P VL C H+ C C+
Sbjct: 65 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 94
>gi|297274464|ref|XP_001104514.2| PREDICTED: tripartite motif-containing protein 13-like isoform 1
[Macaca mulatta]
Length = 409
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 8 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 98
>gi|66807459|ref|XP_637452.1| hypothetical protein DDB_G0286991 [Dictyostelium discoideum AX4]
gi|60465876|gb|EAL63947.1| hypothetical protein DDB_G0286991 [Dictyostelium discoideum AX4]
Length = 459
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
E C IC+E F P +L C H CK+CI + Q +F CP+C
Sbjct: 60 EDFTCSICYELFER----PIILPCNHNFCKSCIEDMVIG---------QKQIF-HCPFCR 105
Query: 102 LLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFC 141
++ KG P N FL VE M K+ + FC
Sbjct: 106 -TEVKLTEKGVDGLPV-NSFLFTAVEKM-----KNANAFC 138
>gi|62529022|gb|AAX84806.1| TRIM50 [Gorilla gorilla]
Length = 102
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFI 95
S++ E+ L+CPIC E F P +L CGH+ CK C+ L + L +
Sbjct: 6 SLLELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLGSLSY----------HLDTKL 51
Query: 96 SCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMN--GD 132
CP C ++VV G+ P N L W++E++ GD
Sbjct: 52 RCPMC----WQVV-DGSSSPP--NVSLAWVIEALRLPGD 83
>gi|301627759|ref|XP_002943042.1| PREDICTED: hypothetical protein LOC100495940 [Xenopus (Silurana)
tropicalis]
Length = 1038
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 2 WNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPY 61
W+ + N +++D + S S +++ REE L C ICW+ + P
Sbjct: 250 WHLGLDLMDDNYSVRHDWVDTELPYSPSS---MAAADLREE-LNCSICWDIYTD----PV 301
Query: 62 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
L CGH+ C+ CI G W K ++ SCP C
Sbjct: 302 TLPCGHSFCQGCI-GRTWDGQK------EIGETPSCPEC 333
>gi|290978613|ref|XP_002672030.1| transcriptional intermediary factor 1 alpha [Naegleria gruberi]
gi|284085603|gb|EFC39286.1| transcriptional intermediary factor 1 alpha [Naegleria gruberi]
Length = 444
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 37 VVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFIS 96
+V EESL C C+E P VL CGH++C CI+ A + F L ++ P F+
Sbjct: 2 LVIDEESLSCKFCFELLQ----DPRVLPCGHSMCTRCIM----ANINFKKLKLKEP-FLQ 52
Query: 97 CP 98
P
Sbjct: 53 AP 54
>gi|432858982|ref|XP_004069035.1| PREDICTED: E3 ubiquitin-protein ligase RNF182-like [Oryzias
latipes]
Length = 267
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 35 SSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF 94
S+V E LEC IC+ ++ P +L C H +C C+ K + P
Sbjct: 22 QSLVYTVEELECKICYNRYDTRSRKPKLLGCLHRVCAKCL-------KKMVDMGESSPSV 74
Query: 95 ISCPWCN 101
ISCP+C
Sbjct: 75 ISCPFCR 81
>gi|47216988|emb|CAG04930.1| unnamed protein product [Tetraodon nigroviridis]
Length = 179
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPW 99
R++ L C +C+ S+++ +P L CGH C+ C+ L + ++I CP
Sbjct: 31 RKQDLVCIVCFGSYDLATRLPRRLHCGHAFCQACLKRLDTVINDQ--------VWIPCPQ 82
Query: 100 CNLLSFR 106
C + R
Sbjct: 83 CRQNTPR 89
>gi|296194463|ref|XP_002744956.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 isoform 2 [Callithrix
jacchus]
Length = 569
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|410948697|ref|XP_003981067.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 isoform 2 [Felis
catus]
Length = 568
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 51 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 96
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 97 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 125
>gi|402902044|ref|XP_003913939.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Papio
anubis]
gi|402902046|ref|XP_003913940.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Papio
anubis]
Length = 406
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|327263122|ref|XP_003216370.1| PREDICTED: e3 ubiquitin-protein ligase TRIM23-like [Anolis
carolinensis]
Length = 578
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 28/116 (24%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL + CP+
Sbjct: 33 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAVRCPF 78
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSGS 153
+V G+ +KN+ LL ++E + V G C + + SG
Sbjct: 79 ----DRQVTELGDSGVWGLKKNFALLELLERLQNGLV----GQCGSNEDSIGLSGE 126
>gi|299756460|ref|XP_001829349.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130]
gi|298411686|gb|EAU92309.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130]
Length = 1155
Score = 38.1 bits (87), Expect = 4.2, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI---LGLQWAVVKFPTLP 88
+ V + +S+EE ECPIC F VE +V C H CK CI +G+ + PT P
Sbjct: 877 EQVLANLSKEEVTECPIC---FGEVEYPMFVPDCMHQFCKECITSHIGICEEKGQSPTCP 933
>gi|403341378|gb|EJY69994.1| Zinc finger protein [Oxytricha trifallax]
Length = 278
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 46 CPICWESFNMVENVPYVLW-CGHTLCKNCI 74
CPIC+E F N P++L+ CGHT CK CI
Sbjct: 43 CPICFELFLPPINQPFILFPCGHTFCKICI 72
>gi|281341771|gb|EFB17355.1| hypothetical protein PANDA_007965 [Ailuropoda melanoleuca]
Length = 547
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 2 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 47
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 48 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 76
>gi|390362239|ref|XP_003730105.1| PREDICTED: tripartite motif-containing protein 4-like
[Strongylocentrotus purpuratus]
Length = 330
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
SLECP+C ++F P +L C HT CK C+ L
Sbjct: 12 SLECPVCLDTFTD----PKILSCSHTYCKTCLDNL 42
>gi|332229785|ref|XP_003264067.1| PREDICTED: RING finger protein 183 isoform 1 [Nomascus
leucogenys]
gi|441622640|ref|XP_004088851.1| PREDICTED: RING finger protein 183 isoform 2 [Nomascus
leucogenys]
Length = 192
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+E ECP+CW FN + P +L C H+ C C+
Sbjct: 6 GQELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECL 41
>gi|291236420|ref|XP_002738137.1| PREDICTED: tripartite motif-containing 2-like [Saccoglossus
kowalevskii]
Length = 421
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 21/96 (21%)
Query: 32 DDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQL 91
DD+ E+ L CPIC E F P +L C HT C+ C+ W K+ L
Sbjct: 15 DDID-----EKILLCPICQERFTS----PKILPCVHTFCEKCLKS--WIEKKYGKL---- 59
Query: 92 PLFISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVE 127
+CP C V+ G ++ N F+ M+E
Sbjct: 60 ----TCPSCR--KPHVIPPGGVRELNNNLFINEMLE 89
>gi|149641196|ref|XP_001510595.1| PREDICTED: tripartite motif-containing protein 59-like
[Ornithorhynchus anatinus]
Length = 403
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPT-LPVQLPLFISCPW 99
EE L C IC+ F P VL C HT C+ C+ + A F P+++PL CP
Sbjct: 5 EEELTCSICYSIFED----PRVLPCSHTFCRTCLENVLQASSNFYIWRPLRIPL--KCPN 58
Query: 100 CN 101
C
Sbjct: 59 CR 60
>gi|16445412|ref|NP_434698.1| E3 ubiquitin-protein ligase TRIM13 isoform 1 [Homo sapiens]
gi|47132521|ref|NP_005789.2| E3 ubiquitin-protein ligase TRIM13 isoform 1 [Homo sapiens]
gi|47132524|ref|NP_998755.1| E3 ubiquitin-protein ligase TRIM13 isoform 1 [Homo sapiens]
gi|71153168|sp|O60858.2|TRI13_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM13; AltName:
Full=B-cell chronic lymphocytic leukemia tumor
suppressor Leu5; AltName: Full=Leukemia-associated
protein 5; AltName: Full=Putative tumor suppressor RFP2;
AltName: Full=RING finger protein 77; AltName: Full=Ret
finger protein 2; AltName: Full=Tripartite
motif-containing protein 13
gi|13097765|gb|AAH03579.1| Tripartite motif-containing 13 [Homo sapiens]
gi|13124899|gb|AAK13059.1| CAR [Homo sapiens]
gi|28395473|gb|AAO38979.1| ret finger protein 2 transcript variant 1 [Homo sapiens]
gi|39777541|gb|AAR31110.1| leu5 [Homo sapiens]
gi|39795405|gb|AAH63407.1| Tripartite motif-containing 13 [Homo sapiens]
gi|119629250|gb|EAX08845.1| ret finger protein 2, isoform CRA_b [Homo sapiens]
gi|119629251|gb|EAX08846.1| ret finger protein 2, isoform CRA_b [Homo sapiens]
gi|119629252|gb|EAX08847.1| ret finger protein 2, isoform CRA_b [Homo sapiens]
gi|119629253|gb|EAX08848.1| ret finger protein 2, isoform CRA_b [Homo sapiens]
gi|123983986|gb|ABM83496.1| ret finger protein 2 [synthetic construct]
gi|123998219|gb|ABM86711.1| ret finger protein 2 [synthetic construct]
gi|189069430|dbj|BAG37096.1| unnamed protein product [Homo sapiens]
gi|261861912|dbj|BAI47478.1| tripartite motif-containing protein 13 [synthetic construct]
Length = 407
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|391338358|ref|XP_003743526.1| PREDICTED: roquin-like [Metaseiulus occidentalis]
Length = 433
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCI 74
L CP C + F+ + P +L CGHTLC+ C+
Sbjct: 4 LLCPACEQKFSPIVRRPLILSCGHTLCQLCL 34
>gi|297274466|ref|XP_002800812.1| PREDICTED: tripartite motif-containing protein 13-like isoform 2
[Macaca mulatta]
gi|297274468|ref|XP_002800813.1| PREDICTED: tripartite motif-containing protein 13-like isoform 3
[Macaca mulatta]
gi|297274470|ref|XP_002800814.1| PREDICTED: tripartite motif-containing protein 13-like isoform 4
[Macaca mulatta]
gi|355754705|gb|EHH58606.1| E3 ubiquitin-protein ligase TRIM13 [Macaca fascicularis]
Length = 406
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|55953112|ref|NP_001007279.1| E3 ubiquitin-protein ligase TRIM13 isoform 2 [Homo sapiens]
gi|55418572|gb|AAV51406.1| candidate tumor suppressor RFP2 [Homo sapiens]
gi|119629249|gb|EAX08844.1| ret finger protein 2, isoform CRA_a [Homo sapiens]
Length = 410
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 8 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 98
>gi|62529017|gb|AAX84804.1| TRIM50 [Pongo pygmaeus]
Length = 102
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 SVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
S+ E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 6 SLPELEDRLQCPICLEVFKE----PLMLQCGHSYCKGCLVSL 43
>gi|407925141|gb|EKG18160.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1134
Score = 38.1 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 26 ASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNC 73
A + SD+ V+ + + + + CPIC + VEN L CGH C C
Sbjct: 762 ARQLSDEVVARIKAEDGAFSCPICLDG---VENPAIFLPCGHNACSEC 806
>gi|9651927|gb|AAF91315.1|AF241850_1 ret finger protein 2 [Homo sapiens]
gi|12407423|gb|AAG53500.1|AF220127_1 tripartite motif protein TRIM13 alpha [Homo sapiens]
gi|3133092|emb|CAA12136.1| tumor suppressor [Homo sapiens]
gi|14009479|gb|AAK51624.1| putative tumor suppressor RFP2 [Homo sapiens]
gi|91680937|gb|ABE41638.1| putative tumor suppressor RFP2 [Homo sapiens]
Length = 407
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|355726003|gb|AES08732.1| tripartite motif-containing 13 [Mustela putorius furo]
Length = 250
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ +L P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGTVR-NSLWRSSPF--KCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|317418623|emb|CBN80661.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 370
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILG-LQWAVVKFPTLPVQLPLFISCPW 99
E++L CP+C + F P VL C H+ CK+C+ + +V L ++PL +S P
Sbjct: 6 EKNLSCPVCQDIFR----DPVVLSCSHSFCKDCLQTWWREKIVHECPLCKKIPL-LSDPA 60
Query: 100 CNLL 103
CNL+
Sbjct: 61 CNLV 64
>gi|19075245|ref|NP_587745.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74638645|sp|Q9P3U8.1|YJ95_SCHPO RecName: Full=Uncharacterized RING finger protein C548.05c
gi|8670896|emb|CAB94947.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
Length = 468
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
+++LECPIC E+ P+ CGHT C C+L PT +L S +
Sbjct: 80 KKTLECPICTEALQR----PFTTHCGHTYCYECLLNWLKESKSCPTCRQKLYTQPSPAYL 135
Query: 101 NLLSFRVVYKGNLKFP 116
VV N FP
Sbjct: 136 VYEIMNVVAASNSGFP 151
>gi|426375500|ref|XP_004054572.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Gorilla
gorilla gorilla]
Length = 410
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 8 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 98
>gi|426375498|ref|XP_004054571.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Gorilla
gorilla gorilla]
Length = 407
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|14149754|ref|NP_075722.1| E3 ubiquitin-protein ligase TRIM13 [Mus musculus]
gi|255982501|ref|NP_001157692.1| E3 ubiquitin-protein ligase TRIM13 [Mus musculus]
gi|47117305|sp|Q9CYB0.1|TRI13_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM13; AltName:
Full=Putative tumor suppressor RFP2; AltName: Full=Ret
finger protein 2; AltName: Full=Tripartite
motif-containing protein 13
gi|12857315|dbj|BAB30973.1| unnamed protein product [Mus musculus]
gi|148704148|gb|EDL36095.1| mCG4281, isoform CRA_a [Mus musculus]
gi|148704149|gb|EDL36096.1| mCG4281, isoform CRA_a [Mus musculus]
gi|148877994|gb|AAI45916.1| Tripartite motif-containing 13 [Mus musculus]
gi|187952937|gb|AAI38577.1| Tripartite motif-containing 13 [Mus musculus]
Length = 407
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|341892155|gb|EGT48090.1| hypothetical protein CAEBREN_09013 [Caenorhabditis brenneri]
Length = 226
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 45 ECPICWESF--NMVENVPYVLWCGHTLCKNCILGL 77
ECPIC E+F ++ P +L CGHT+C CI +
Sbjct: 161 ECPICTETFTLHLQATRPRILHCGHTVCHTCIQSM 195
>gi|410980709|ref|XP_003996718.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25 [Felis catus]
Length = 636
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 20/95 (21%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
++ +V E L C IC E F VP CGH C +C L WAV + P L
Sbjct: 1 MAELVPLAEELSCSICLEHFK----VPVTTPCGHNFCSSC-LDETWAVQEPPYL------ 49
Query: 94 FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVES 128
CP C R Y+ + KN L +VE
Sbjct: 50 ---CPQC-----RASYQERPQL-HKNTVLCAVVEQ 75
>gi|397476963|ref|XP_003809858.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 3 [Pan
paniscus]
Length = 410
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 8 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 98
>gi|301760054|ref|XP_002915828.1| PREDICTED: RING finger protein 183-like [Ailuropoda melanoleuca]
gi|281339931|gb|EFB15515.1| hypothetical protein PANDA_003853 [Ailuropoda melanoleuca]
Length = 190
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCI 74
ECP+CW FN + P VL C H+ C C+
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|449500284|ref|XP_002194323.2| PREDICTED: uncharacterized protein LOC100219676 [Taeniopygia
guttata]
Length = 281
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 29/113 (25%)
Query: 6 STCLAGNVGLKNDSL--KASEAASECSDDD-----------VSSVVSREESLECPICWES 52
STC N + D L +A+E A+E D+ VSS + + CPIC +S
Sbjct: 170 STCEDDNAESQQDPLDSRAAENAAEVLADENEEEPQDIESSVSSSAQQGGVIRCPICMDS 229
Query: 53 FNMVENVPYVL---WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102
++ + ++ CGH C C LPV L + CP C +
Sbjct: 230 YSEIMQSGRLIVTTLCGHVFCSEC-------------LPVALEILGRCPTCRM 269
>gi|432104590|gb|ELK31202.1| E3 ubiquitin-protein ligase TRIM23, partial [Myotis davidii]
Length = 561
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 2 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 47
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 48 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 76
>gi|405952599|gb|EKC20392.1| Tripartite motif-containing protein 56 [Crassostrea gigas]
Length = 592
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
+++ V ++ L C IC E FN+ P +L C HT C+ CI + V+ +
Sbjct: 80 MATAVCKDPELRCTICLEKFNL----PKILPCLHTFCEPCI----QSYVQNCAAKEENTS 131
Query: 94 FISCPWCNL 102
F CP C +
Sbjct: 132 FFRCPLCRM 140
>gi|403303336|ref|XP_003942289.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403303338|ref|XP_003942290.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 407
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|359320716|ref|XP_003639399.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 183 [Canis
lupus familiaris]
Length = 190
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
+ ECP+CW FN + P VL C H+ C C+
Sbjct: 7 QEPECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|260826013|ref|XP_002607960.1| hypothetical protein BRAFLDRAFT_213710 [Branchiostoma floridae]
gi|229293310|gb|EEN63970.1| hypothetical protein BRAFLDRAFT_213710 [Branchiostoma floridae]
Length = 77
Score = 37.7 bits (86), Expect = 4.8, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L C IC E F P VL C HT CK+C+ GL
Sbjct: 9 EELTCSICLELFTK----PKVLLCQHTFCKDCLQGL 40
>gi|350536839|ref|NP_001233446.1| tripartite motif-containing protein 13 [Pan troglodytes]
gi|397476959|ref|XP_003809856.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Pan
paniscus]
gi|397476961|ref|XP_003809857.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Pan
paniscus]
gi|343960036|dbj|BAK63872.1| ret finger protein 2 [Pan troglodytes]
Length = 407
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|395844460|ref|XP_003804018.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 224-like
[Otolemur garnettii]
Length = 155
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
++C IC+ ++++ ++P L+CGHT C+ C+ L PV +I CP C
Sbjct: 21 IDCIICYSAYDLSGHLPRRLYCGHTFCQACMRRLD--------TPVHEQRWIPCPQCR 70
>gi|354489168|ref|XP_003506736.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Cricetulus griseus]
gi|344248762|gb|EGW04866.1| Tripartite motif-containing protein 13 [Cricetulus griseus]
Length = 407
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|9629493|ref|NP_044724.1| hypothetical protein DaV1gp27 [Duck adenovirus A]
gi|56158908|ref|AP_000104.1| ORF7 [Duck adenovirus A]
gi|2145348|emb|CAA70794.1| hypothetical protein [Duck adenovirus 1]
Length = 346
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E L CP+C + F VP L CGHT CK+C+ G+
Sbjct: 14 EKLLCPVCLDLFR----VPITLMCGHTCCKHCLNGI 45
>gi|410978879|ref|XP_003995815.1| PREDICTED: RING finger protein 183 [Felis catus]
Length = 190
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCI 74
ECP+CW FN + P VL C H+ C C+
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|344281820|ref|XP_003412675.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13-like [Loxodonta
africana]
Length = 408
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|332241953|ref|XP_003270149.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 1 [Nomascus
leucogenys]
gi|332241955|ref|XP_003270150.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Nomascus
leucogenys]
gi|441613918|ref|XP_004088181.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Nomascus leucogenys]
Length = 407
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|308480497|ref|XP_003102455.1| hypothetical protein CRE_04107 [Caenorhabditis remanei]
gi|308261187|gb|EFP05140.1| hypothetical protein CRE_04107 [Caenorhabditis remanei]
Length = 186
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 46 CPICWESFNMVEN-VPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104
C +C E +N N P VL CGHTLC +C+ + + +I CP+ L +
Sbjct: 120 CEVCDEDYNHTANGTPRVLKCGHTLCHSCLAQIATS------------HYIQCPFDRLFT 167
Query: 105 FRVVYKGNLKFPRKNYFLLWM 125
V + N P KN+ +L M
Sbjct: 168 NIGVNELN-DLP-KNFVVLHM 186
>gi|296189250|ref|XP_002742703.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 2 [Callithrix
jacchus]
Length = 407
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|14581675|gb|AAK56791.1| putative transcription factor ret finger protein 2 [Mus musculus]
Length = 407
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|348528194|ref|XP_003451603.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13-like [Oreochromis
niloticus]
Length = 402
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
EE L CPIC F P VL C H+ CK C+ GL
Sbjct: 5 EEELTCPICCGLFE----DPRVLLCSHSFCKKCLEGL 37
>gi|332241957|ref|XP_003270151.1| PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform 3 [Nomascus
leucogenys]
Length = 410
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ G+ V+ + P CP C
Sbjct: 8 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILEGSVRN---SLWRPAPFKCPTC 60
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 61 R----KETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCK 98
>gi|327261165|ref|XP_003215402.1| PREDICTED: e3 ubiquitin-protein ligase TRIM13-like [Anolis
carolinensis]
Length = 408
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P L C H CK C+ G+ + + Q P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRALPCSHNFCKKCLEGILEGNAR-SIIWRQSPF--KCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ V NL+ NY L +VE N +V + C+
Sbjct: 58 RKET-TVTGVNNLQV---NYSLKGIVEKYNKIKVTTKMPVCK 95
>gi|255647385|gb|ACU24158.1| unknown [Glycine max]
Length = 206
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 13 VGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKN 72
V L N+S ASE A + + +E CPIC +VE + CGH CKN
Sbjct: 118 VNLTNNSSSASENAKKTPEPPKEPEAPKEPVFNCPICMSP--LVEEM--STRCGHIFCKN 173
Query: 73 CILGLQWAVVKFPT 86
CI +A K PT
Sbjct: 174 CIRAAIFAQAKCPT 187
>gi|62529015|gb|AAX84803.1| TRIM50 [Macaca fuscata]
Length = 103
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
E+ L+CPIC E F P +L CGH+ CK C++ L
Sbjct: 11 EDRLQCPICLEVFKE----PLMLRCGHSYCKGCLVSL 43
>gi|327270042|ref|XP_003219800.1| PREDICTED: e3 ubiquitin-protein ligase RNF182-like [Anolis
carolinensis]
Length = 246
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 31 DDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 90
+D V S S E LEC IC+ +N+ + P VL C H +C C+ ++ F P
Sbjct: 7 EDAVESQGSDE--LECKICYNRYNLRQRKPKVLGCCHRVCAKCL----CKIIDFGDSPQG 60
Query: 91 LPLFISCPWC 100
+ I CP+C
Sbjct: 61 V---IVCPFC 67
>gi|345325019|ref|XP_001513735.2| PREDICTED: E3 ubiquitin-protein ligase TRIM13 [Ornithorhynchus
anatinus]
Length = 408
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 17/105 (16%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVK---FPTLPVQLPLFISC 97
EE L CPIC F+ P VL C H CK C+ G+ V+ + + P + C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGILDGNVRNMLWRSAPFK------C 54
Query: 98 PWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
P C + V + + NY L +VE N +V C+
Sbjct: 55 PTCR----KEVSATGVSSLQVNYSLKGIVEKYNKIKVSPKMPVCK 95
>gi|149059255|gb|EDM10262.1| tripartite motif protein 23, isoform CRA_a [Rattus norvegicus]
Length = 481
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 74
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 75 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 103
>gi|388454687|ref|NP_001253130.1| tripartite motif-containing protein 3 [Macaca mulatta]
gi|402894369|ref|XP_003910335.1| PREDICTED: tripartite motif-containing protein 3 isoform 1 [Papio
anubis]
gi|402894371|ref|XP_003910336.1| PREDICTED: tripartite motif-containing protein 3 isoform 2 [Papio
anubis]
gi|402894373|ref|XP_003910337.1| PREDICTED: tripartite motif-containing protein 3 isoform 3 [Papio
anubis]
gi|355566763|gb|EHH23142.1| RING finger protein 22 [Macaca mulatta]
gi|355752378|gb|EHH56498.1| RING finger protein 22 [Macaca fascicularis]
gi|380808868|gb|AFE76309.1| tripartite motif-containing protein 3 [Macaca mulatta]
gi|383415231|gb|AFH30829.1| tripartite motif-containing protein 3 [Macaca mulatta]
Length = 744
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
L C IC + + P VL C HT C+ C+ +P Q L +SCP C
Sbjct: 20 LVCSICLDRYQ----CPKVLPCLHTFCERCLQNY---------IPAQ-SLTLSCPVCRQT 65
Query: 104 SFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSG 152
S ++ + + + N+F+ ++E+M +H ED P S+ +G
Sbjct: 66 S--ILPEQGVSALQNNFFISSLMEAMQQASDGAHD--PEDPHPLSAVAG 110
>gi|440900361|gb|ELR51514.1| RING finger protein 183 [Bos grunniens mutus]
Length = 188
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCI 74
ECP+CW FN + P VL C H+ C C+
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|410948695|ref|XP_003981066.1| PREDICTED: E3 ubiquitin-protein ligase TRIM23 isoform 1 [Felis
catus]
Length = 591
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 24/93 (25%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLF---ISCPW 99
LEC +C + F++ + VP +L CGHT+C +C+ +LPL I CP+
Sbjct: 51 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCL--------------TRLPLHGRAIRCPF 96
Query: 100 CNLLSFRVVYKGNLKF--PRKNYFLLWMVESMN 130
+V G+ +KN+ LL ++E +
Sbjct: 97 ----DRQVTDLGDSGVWGLKKNFALLELLERLQ 125
>gi|195113715|ref|XP_002001413.1| GI21991 [Drosophila mojavensis]
gi|193918007|gb|EDW16874.1| GI21991 [Drosophila mojavensis]
Length = 294
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 23 SEAASECSDDDVSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74
S EC D D S S E+ +CP+C E E PY CGH CK+CI
Sbjct: 220 SSPKRECLDLDKSD--SFREAYKCPVCLECVRTRE--PYSTKCGHIFCKHCI 267
>gi|156342195|ref|XP_001620907.1| hypothetical protein NEMVEDRAFT_v1g248744 [Nematostella
vectensis]
gi|156206362|gb|EDO28807.1| predicted protein [Nematostella vectensis]
Length = 547
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGL 77
LEC +C + F++ + VP +L CGHT+C +C+ L
Sbjct: 20 LECRVCEDVFHLQGDKVPRLLLCGHTVCHDCLARL 54
>gi|91077676|ref|XP_974586.1| PREDICTED: similar to E3 ubiquitin-ligase protein COP1 [Tribolium
castaneum]
gi|270001535|gb|EEZ97982.1| hypothetical protein TcasGA2_TC000377 [Tribolium castaneum]
Length = 662
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 17/56 (30%)
Query: 46 CPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
CP+C FN++E Y+ CGHT C CIL A+ + CP CN
Sbjct: 51 CPVC---FNLIEEA-YITKCGHTFCYTCILKSIEALKR-------------CPKCN 89
>gi|291408973|ref|XP_002720780.1| PREDICTED: ret finger protein 2 [Oryctolagus cuniculus]
Length = 407
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F+ P VL C H CK C+ GL V+ + P CP C
Sbjct: 5 EEDLTCPICCSLFD----DPRVLPCSHNFCKKCLEGLLEGNVRN---SLWRPSPFKCPTC 57
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCE 142
+ + + NY L +VE N ++ C+
Sbjct: 58 R----KETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCK 95
>gi|301779217|ref|XP_002925020.1| PREDICTED: tripartite motif-containing protein 3-like [Ailuropoda
melanoleuca]
gi|281338585|gb|EFB14169.1| hypothetical protein PANDA_014455 [Ailuropoda melanoleuca]
Length = 744
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
L C IC + + P VL C HT C+ C+ +P Q L +SCP C
Sbjct: 20 LVCSICLDRYR----CPKVLPCLHTFCERCLQNY---------IPAQ-SLTLSCPVCRQT 65
Query: 104 SFRVVYKGNLKFPRKNYFLLWMVESMNGDRVKSHSGFCEDRQPASSSSG 152
S ++ + + + N+F+ ++E+M +H ED P S+ +G
Sbjct: 66 S--ILPEQGVSALQNNFFITSLMEAMQQAPDGAHD--PEDPHPLSAVAG 110
>gi|125854139|ref|XP_001344050.1| PREDICTED: hypothetical protein LOC100004848 [Danio rerio]
Length = 621
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 22/100 (22%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
++S+ EE L CPIC E F P +L C H+ C+ C+ W +
Sbjct: 1 MASLRVSEEGLSCPICSEIF----KTPVLLSCSHSFCRQCLQQF-WRNTESQ-------- 47
Query: 94 FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDR 133
+CP C S ++ P N L + ES+ GD+
Sbjct: 48 --NCPVCRRRSSKLK-------PPVNLALQNLCESIQGDK 78
>gi|119607957|gb|EAW87551.1| membrane associated DNA binding protein, isoform CRA_d [Homo
sapiens]
Length = 218
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKF 84
E L CPIC+ F+ + P L C HT+CK C+ L F
Sbjct: 10 EFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF 52
>gi|78369200|ref|NP_001030499.1| RING finger protein 183 [Bos taurus]
gi|110816411|sp|Q3SWY0.1|RN183_BOVIN RecName: Full=RING finger protein 183
gi|74356389|gb|AAI04612.1| Ring finger protein 183 [Bos taurus]
gi|296484356|tpg|DAA26471.1| TPA: ring finger protein 183 [Bos taurus]
Length = 188
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCI 74
ECP+CW FN + P VL C H+ C C+
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|443692922|gb|ELT94413.1| hypothetical protein CAPTEDRAFT_222732 [Capitella teleta]
Length = 516
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 16/62 (25%)
Query: 43 SLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCN 101
+ECP+C+E + P +L CGHT+C NC L V F+ CP C
Sbjct: 106 EMECPVCFEVYKS----PLLLPGCGHTICSNC-----------AELLVTEGNFLRCPECR 150
Query: 102 LL 103
L+
Sbjct: 151 LI 152
>gi|413958201|dbj|BAM66374.1| tripartite motif 25 [Felis catus]
Length = 608
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 20/95 (21%)
Query: 34 VSSVVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPL 93
++ +V E L C IC E F VP CGH C +C L WAV + P L
Sbjct: 1 MAELVPLAEELSCSICLEHFK----VPVTTPCGHNFCSSC-LDETWAVQEPPYL------ 49
Query: 94 FISCPWCNLLSFRVVYKGNLKFPRKNYFLLWMVES 128
CP C R Y+ + KN L +VE
Sbjct: 50 ---CPQC-----RASYQERPQL-HKNTVLCAVVEQ 75
>gi|156392415|ref|XP_001636044.1| predicted protein [Nematostella vectensis]
gi|156223143|gb|EDO43981.1| predicted protein [Nematostella vectensis]
Length = 541
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 44 LECPICWESFNMV-ENVPYVLWCGHTLCKNCILGL 77
LEC +C + F++ + VP +L CGHT+C +C+ L
Sbjct: 3 LECRVCEDVFHLQGDKVPRLLLCGHTVCHDCLARL 37
>gi|313239853|emb|CBY14702.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 19 SLKASEAASECSDDDVSSVVSREESLE-----CPICWESFNMVENVPYVLWCGHTLCKNC 73
+K + A SE SD + ++E+LE C IC+E ++ V+ + VL CGH C+ C
Sbjct: 154 QVKLATALSEKSD----MLFEKKENLENARFKCNICFEKYDDVDRLQCVLQCGHPACEKC 209
Query: 74 ILGL 77
+ L
Sbjct: 210 LTAL 213
>gi|335280804|ref|XP_003353662.1| PREDICTED: RING finger protein 183-like isoform 1 [Sus scrofa]
Length = 190
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 45 ECPICWESFNMVENVPYVLWCGHTLCKNCI 74
ECP+CW FN + P VL C H+ C C+
Sbjct: 10 ECPVCWNPFNNTFHTPKVLDCCHSFCVECL 39
>gi|313244370|emb|CBY15173.1| unnamed protein product [Oikopleura dioica]
Length = 115
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
++ EC IC+E FN E VL CGH C C+ L
Sbjct: 58 QQRTECNICFEEFNSEERKESVLHCGHRSCYKCLAEL 94
>gi|213514884|ref|NP_001133371.1| Tripartite motif-containing protein 13 [Salmo salar]
gi|209152241|gb|ACI33103.1| Tripartite motif-containing protein 13 [Salmo salar]
Length = 384
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 19/106 (17%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWC 100
EE L CPIC F P VL C H+ CK C+ G+ + P+ P F CP C
Sbjct: 5 EEDLTCPICCCLFED----PRVLPCSHSFCKKCLEGILEGNNRG---PIWRPPF-KCPSC 56
Query: 101 NLLSFRVVYKGNLKFPRKNYFLLWMVESMNGDRV-------KSHSG 139
+ + + + NY L +VE N R+ K HSG
Sbjct: 57 R----KETPQNGINTLQINYSLRGIVEKYNKIRLIPRMVLCKHHSG 98
>gi|410896730|ref|XP_003961852.1| PREDICTED: tripartite motif-containing 13-like [Takifugu
rubripes]
Length = 394
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCILGL 77
EE L CPIC F P VL C H+ CK C+ GL
Sbjct: 5 EEELTCPICCGLFE----DPRVLLCSHSFCKKCLEGL 37
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.137 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,257,787,122
Number of Sequences: 23463169
Number of extensions: 173975727
Number of successful extensions: 1035010
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 1025
Number of HSP's that attempted gapping in prelim test: 1027246
Number of HSP's gapped (non-prelim): 4950
length of query: 266
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 126
effective length of database: 9,074,351,707
effective search space: 1143368315082
effective search space used: 1143368315082
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)