Query 036732
Match_columns 266
No_of_seqs 195 out of 1369
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 07:47:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036732.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036732hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c2la2 g.44.1.2 (A:225-304) S 99.5 2.5E-14 1.8E-18 104.1 5.7 70 40-132 4-73 (80)
2 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.4 2.2E-14 1.6E-18 103.8 4.3 71 39-132 4-74 (78)
3 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.4 5E-15 3.6E-19 112.8 -0.2 73 37-130 15-87 (103)
4 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.3 8.5E-14 6.2E-18 104.7 1.0 71 37-133 16-87 (97)
5 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.3 3.2E-13 2.3E-17 99.7 3.7 50 40-105 20-69 (86)
6 d1wgma_ g.44.1.2 (A:) Ubiquiti 99.3 4.7E-12 3.4E-16 95.5 7.6 73 39-135 18-91 (98)
7 d1bora_ g.44.1.1 (A:) Acute pr 99.1 3E-12 2.2E-16 87.0 -0.2 44 42-105 5-48 (56)
8 d1fbva4 g.44.1.1 (A:356-434) C 99.1 2.7E-11 2E-15 87.6 3.4 47 43-105 23-69 (79)
9 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.1 1.6E-11 1.2E-15 81.9 1.9 49 44-104 1-49 (52)
10 d1iyma_ g.44.1.1 (A:) EL5 RING 99.1 3.1E-11 2.3E-15 81.5 3.0 51 40-104 2-53 (55)
11 d2baya1 g.44.1.2 (A:1-56) Pre- 99.0 6.7E-11 4.9E-15 80.0 2.8 45 44-105 1-46 (56)
12 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.0 1.7E-10 1.2E-14 80.3 3.7 52 42-105 2-54 (65)
13 d1chca_ g.44.1.1 (A:) Immediat 98.9 1.1E-10 7.9E-15 81.9 2.3 47 42-105 4-51 (68)
14 d1v87a_ g.44.1.1 (A:) Deltex p 98.5 2.6E-08 1.9E-12 75.8 4.1 54 43-104 25-92 (114)
15 d3dplr1 g.44.1.1 (R:19-106) RI 98.3 1.2E-07 8.7E-12 69.2 3.6 48 44-104 22-83 (88)
16 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.2 1.8E-07 1.3E-11 63.3 2.2 49 41-104 4-57 (60)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 98.0 8.3E-07 6E-11 64.9 2.3 53 42-101 4-57 (94)
18 d1dvpa2 g.50.1.1 (A:149-220) H 78.7 0.43 3.1E-05 32.1 1.8 38 39-76 9-46 (72)
19 d2cs3a1 g.44.1.3 (A:8-87) Prot 68.4 1.2 8.6E-05 29.9 2.0 32 42-77 7-42 (80)
20 d2epqa1 g.37.1.1 (A:380-411) P 59.0 1.4 9.8E-05 24.4 0.7 13 42-54 2-14 (32)
21 d1zbdb_ g.50.1.1 (B:) Effector 54.5 2.4 0.00017 30.9 1.7 53 42-103 47-100 (124)
22 d1vfya_ g.50.1.1 (A:) vps27p p 53.7 2.8 0.0002 27.3 1.8 32 44-76 6-38 (67)
23 d1weva_ g.50.1.2 (A:) PHD fing 51.9 1.9 0.00014 29.4 0.6 36 40-76 13-50 (88)
24 d1joca1 g.50.1.1 (A:1348-1411) 49.5 3 0.00022 26.8 1.4 35 42-76 7-41 (64)
25 d2dlqa3 g.37.1.1 (A:63-92) GLI 46.3 3 0.00022 22.5 0.8 14 41-54 2-15 (30)
26 d1weoa_ g.44.1.1 (A:) Cellulos 45.4 9.9 0.00072 26.1 3.6 52 42-105 15-69 (93)
27 d1f62a_ g.50.1.2 (A:) Williams 44.6 3.7 0.00027 24.8 1.1 46 45-102 2-49 (51)
28 d1rzhh2 f.23.10.1 (H:11-35) Ph 42.5 10 0.00075 19.7 2.5 14 233-246 3-16 (26)
29 d1z60a1 g.49.1.2 (A:328-386) T 39.3 7.6 0.00055 24.8 2.0 31 42-76 14-47 (59)
30 d1y02a2 g.50.1.1 (A:20-70) Rif 38.8 3.9 0.00029 25.2 0.6 32 45-76 2-33 (51)
31 d2ct7a1 g.44.1.4 (A:8-80) Ring 37.3 4 0.00029 26.8 0.4 35 42-76 17-53 (73)
32 d2jnea1 g.41.18.1 (A:1-71) Hyp 37.1 1.9 0.00014 28.7 -1.3 42 43-106 2-43 (71)
33 d1wila_ g.50.1.3 (A:) Hypothet 34.9 8.9 0.00065 26.2 2.0 59 40-103 12-76 (89)
34 d1wewa_ g.50.1.2 (A:) Sumoylat 31.3 16 0.0012 23.8 2.9 56 41-103 14-72 (78)
35 d2axtm1 f.23.35.1 (M:1-36) Pho 29.8 25 0.0018 19.8 3.0 21 222-242 7-27 (36)
36 d1iroa_ g.41.5.1 (A:) Rubredox 29.3 21 0.0015 22.0 2.9 13 43-55 3-15 (53)
37 d1brfa_ g.41.5.1 (A:) Rubredox 26.5 22 0.0016 21.9 2.6 13 91-103 32-44 (53)
38 d1v54b2 f.17.2.1 (B:1-90) Mito 25.9 16 0.0012 24.7 2.1 16 243-258 71-86 (90)
39 d2dsxa1 g.41.5.1 (A:1-52) Rubr 25.6 27 0.0019 21.4 2.9 13 91-103 33-45 (52)
40 d1wfla_ g.80.1.1 (A:) Zinc fin 24.8 26 0.0019 23.1 2.9 29 42-73 24-52 (74)
41 d1wfha_ g.80.1.1 (A:) Zinc fin 24.8 24 0.0018 22.6 2.7 31 41-74 13-43 (64)
42 d1dx8a_ g.41.5.1 (A:) Rubredox 23.2 36 0.0026 22.1 3.4 15 41-55 5-19 (70)
43 d1we9a_ g.50.1.2 (A:) PHD fing 20.8 13 0.00097 23.1 0.7 51 42-102 5-57 (64)
No 1
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46 E-value=2.5e-14 Score=104.09 Aligned_cols=70 Identities=14% Similarity=0.016 Sum_probs=58.3
Q ss_pred CCCcccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccccceecCCCCCCcch
Q 036732 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKN 119 (266)
Q Consensus 40 lee~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~~~~~~~~~~~~~~N 119 (266)
..+.+.||||+++|. +|++++|||+||+.||.++ +...+. .||.||..+. ..++.+|
T Consensus 4 iP~~l~CpIc~~l~~----dPv~~~cGhtfc~~ci~~~-l~~~~~-----------~cP~c~~~l~-------~~~l~pN 60 (80)
T d2c2la2 4 IPDYLCGKISFELMR----EPCITPSGITYDRKDIEEH-LQRVGH-----------FNPVTRSPLT-------QEQLIPN 60 (80)
T ss_dssp CCSTTBCTTTCSBCS----SEEECSSCCEEETTHHHHH-HHHTCS-----------SCTTTCCCCC-------GGGCEEC
T ss_pred CCccccCcCcCchhh----hhcccCCcCeecHHHHHHH-HhcCCc-----------cCCCcccccc-------ccccccH
Confidence 358999999999999 9999999999999999995 333321 5999998765 3578899
Q ss_pred HHHHHHHHHHhcc
Q 036732 120 YFLLWMVESMNGD 132 (266)
Q Consensus 120 ~~l~~~ve~~~~~ 132 (266)
..++++++.+...
T Consensus 61 ~~L~~~I~~~l~~ 73 (80)
T d2c2la2 61 LAMKEVIDAFISE 73 (80)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
No 2
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.44 E-value=2.2e-14 Score=103.78 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=58.7
Q ss_pred cCCCcccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccccceecCCCCCCcc
Q 036732 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRK 118 (266)
Q Consensus 39 ~lee~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~~~~~~~~~~~~~~ 118 (266)
.+.+.+.||||+++|. +|++++|||+||+.||.++ ...+. ..||.|+..+. ..++.+
T Consensus 4 eiP~~l~CpIc~~~m~----dPV~~~cgh~fc~~ci~~~--~~~~~----------~~cP~~~~~l~-------~~~l~p 60 (78)
T d1t1ha_ 4 EFPEYFRCPISLELMK----DPVIVSTGQTYERSSIQKW--LDAGH----------KTCPKSQETLL-------HAGLTP 60 (78)
T ss_dssp CCSSSSSCTTTSCCCS----SEEEETTTEEEEHHHHHHH--HTTTC----------CBCTTTCCBCS-------SCCCEE
T ss_pred CCCccCCCcCcCchhh----CceEccCCCcchHHHHHHH--HHHCC----------CCCCcccccCC-------cccccc
Confidence 4568999999999999 9999999999999999994 33321 15999997765 367889
Q ss_pred hHHHHHHHHHHhcc
Q 036732 119 NYFLLWMVESMNGD 132 (266)
Q Consensus 119 N~~l~~~ve~~~~~ 132 (266)
|..|+++++.+...
T Consensus 61 N~~L~~~I~~~~~~ 74 (78)
T d1t1ha_ 61 NYVLKSLIALWCES 74 (78)
T ss_dssp CTTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 99999999988653
No 3
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=5e-15 Score=112.82 Aligned_cols=73 Identities=30% Similarity=0.535 Sum_probs=55.3
Q ss_pred cccCCCcccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccccceecCCCCCC
Q 036732 37 VVSREESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFP 116 (266)
Q Consensus 37 ~~~lee~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~~~~~~~~~~~~ 116 (266)
...+++.++||||++.+. +|++++|||+||..||.++ +...+.. ..||.||..+. ..++
T Consensus 15 ~~~l~~~l~CpIC~~~~~----~pv~~~CgH~fC~~Ci~~~-~~~~~~~---------~~CP~Cr~~~~-------~~~l 73 (103)
T d1jm7a_ 15 INAMQKILECPICLELIK----EPVSTKCDHIFCKFCMLKL-LNQKKGP---------SQCPLCKNDIT-------KRSL 73 (103)
T ss_dssp HHHHHHHTSCSSSCCCCS----SCCBCTTSCCCCSHHHHHH-HHSSSSS---------CCCTTTSCCCC-------TTTC
T ss_pred HHhcccCcCCCccCchhC----CeEEcCCCCchhhHHHHHH-HHHCCCC---------CcCcCCCCcCC-------hhhC
Confidence 345567899999999999 9999999999999999995 4433221 26999998764 2566
Q ss_pred cchHHHHHHHHHHh
Q 036732 117 RKNYFLLWMVESMN 130 (266)
Q Consensus 117 ~~N~~l~~~ve~~~ 130 (266)
.+|..+.++++.+.
T Consensus 74 ~~n~~l~~~ve~l~ 87 (103)
T d1jm7a_ 74 QESTRFSQLVEELL 87 (103)
T ss_dssp BCCCSSSHHHHHHH
T ss_pred CcCHHHHHHHHHHH
Confidence 67776667776654
No 4
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=8.5e-14 Score=104.73 Aligned_cols=71 Identities=25% Similarity=0.456 Sum_probs=58.0
Q ss_pred cccCCCcccccccccccccCCCCcEEe-cCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccccceecCCCCC
Q 036732 37 VVSREESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKF 115 (266)
Q Consensus 37 ~~~lee~l~CpICl~~f~~~~~~P~~L-~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~~~~~~~~~~~ 115 (266)
...+++.++|+||++.|. +|+++ +|||+||..||.+ |... .||.||..+. ..+
T Consensus 16 l~~l~~~l~C~IC~~~~~----~pv~~~~CgH~fC~~Ci~~--~~~~-------------~CP~Cr~~~~-------~~~ 69 (97)
T d1jm7b_ 16 LDRLEKLLRCSRCTNILR----EPVCLGGCEHIFCSNCVSD--CIGT-------------GCPVCYTPAW-------IQD 69 (97)
T ss_dssp HHHHHHTTSCSSSCSCCS----SCBCCCSSSCCBCTTTGGG--GTTT-------------BCSSSCCBCS-------CSS
T ss_pred HHhhhhcCCCccCCchhh----cCceeCCCCCchhHHHHHH--HHhc-------------cccccCCcCc-------hhh
Confidence 355668899999999999 99986 8999999999998 5422 4999997654 367
Q ss_pred CcchHHHHHHHHHHhccc
Q 036732 116 PRKNYFLLWMVESMNGDR 133 (266)
Q Consensus 116 ~~~N~~l~~~ve~~~~~~ 133 (266)
+..|..+.++++.++..+
T Consensus 70 l~~n~~l~~lv~~~~~~~ 87 (97)
T d1jm7b_ 70 LKINRQLDSMIQLCSKLR 87 (97)
T ss_dssp CCCCHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHH
Confidence 889999999998876543
No 5
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.32 E-value=3.2e-13 Score=99.73 Aligned_cols=50 Identities=32% Similarity=0.648 Sum_probs=41.3
Q ss_pred CCCcccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccc
Q 036732 40 REESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105 (266)
Q Consensus 40 lee~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~ 105 (266)
..+.++|+||++.+. +|++++|||+||+.||.++ ++..+. .||.||..+.
T Consensus 20 ~~~~l~C~IC~~~~~----~pv~~~CgH~FC~~Ci~~~-~~~~~~-----------~CP~Cr~p~~ 69 (86)
T d1rmda2 20 FVKSISCQICEHILA----DPVETSCKHLFCRICILRC-LKVMGS-----------YCPSCRYPCF 69 (86)
T ss_dssp HHHHTBCTTTCSBCS----SEEECTTSCEEEHHHHHHH-HHHTCS-----------BCTTTCCBCC
T ss_pred hccCcCCccCCcchh----cceecCCCChhhHHHHHHH-HhhCCC-----------cCcccCCCCC
Confidence 346789999999999 9999999999999999995 443331 5999998754
No 6
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=4.7e-12 Score=95.46 Aligned_cols=73 Identities=16% Similarity=0.041 Sum_probs=59.8
Q ss_pred cCCCcccccccccccccCCCCcEEecCC-ChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccccceecCCCCCCc
Q 036732 39 SREESLECPICWESFNMVENVPYVLWCG-HTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPR 117 (266)
Q Consensus 39 ~lee~l~CpICl~~f~~~~~~P~~L~Cg-HtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~~~~~~~~~~~~~ 117 (266)
..-+.+.||||.++|. +|++++|| |+||+.||..+ +. .+. .||.|+..+. ..++.
T Consensus 18 ~~P~~f~CPI~~~lm~----dPV~~~~~~~ty~r~~I~~~-l~-~~~-----------~~P~~~~~l~-------~~~L~ 73 (98)
T d1wgma_ 18 DACDEFLDPIMSTLMC----DPVVLPSSRVTVDRSTIARH-LL-SDQ-----------TDPFNRSPLT-------MDQIR 73 (98)
T ss_dssp SCCTTTBCTTTCSBCS----SEEECTTTCCEEEHHHHHHH-TT-TSC-----------BCTTTCSBCC-------TTTSE
T ss_pred CCcHHhCCcCchhHHH----HHHhcccccchhhHHHHHHH-HH-hcC-----------Cccccccccc-------chhhc
Confidence 3446899999999999 99999876 58999999995 33 321 5999998765 47889
Q ss_pred chHHHHHHHHHHhcccCC
Q 036732 118 KNYFLLWMVESMNGDRVK 135 (266)
Q Consensus 118 ~N~~l~~~ve~~~~~~~~ 135 (266)
+|..|++.++.+...+.+
T Consensus 74 pN~~Lr~~I~~~~~~~~~ 91 (98)
T d1wgma_ 74 PNTELKEKIQRWLAERKQ 91 (98)
T ss_dssp ECHHHHHHHHHHHHHSTT
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 999999999998876643
No 7
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=3e-12 Score=86.99 Aligned_cols=44 Identities=32% Similarity=0.645 Sum_probs=37.6
Q ss_pred CcccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccc
Q 036732 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~ 105 (266)
+.++|+||++.+. +|++++|||+||..|+.+ | . ..||.||..+.
T Consensus 5 ~~l~C~IC~~~~~----~p~~lpCgH~fC~~Ci~~--~--~------------~~CP~Cr~~~~ 48 (56)
T d1bora_ 5 QFLRCQQCQAEAK----CPKLLPCLHTLCSGCLEA--S--G------------MQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCB----CCSCSTTSCCSBTTTCSS--S--S------------SSCSSCCSSSS
T ss_pred CCCCCcccCcccC----CCEEecCCCHHhHHHHHc--C--C------------CcCcCCCCccc
Confidence 5689999999999 999999999999999875 3 1 25999998754
No 8
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=2.7e-11 Score=87.64 Aligned_cols=47 Identities=28% Similarity=0.618 Sum_probs=38.5
Q ss_pred cccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccc
Q 036732 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105 (266)
Q Consensus 43 ~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~ 105 (266)
...|+||++.+. +|++++|||.||..||.. |...+. ..||.||..+.
T Consensus 23 ~~~C~IC~~~~~----~~~~~~CgH~fC~~Ci~~--wl~~~~----------~~CP~Cr~~i~ 69 (79)
T d1fbva4 23 FQLCKICAENDK----DVKIEPCGHLMCTSCLTS--WQESEG----------QGCPFCRCEIK 69 (79)
T ss_dssp TTBCTTTSSSBC----CEECSSSCCEECHHHHHH--HHHTTC----------CSCTTTCCCCC
T ss_pred CCCCccCCCcCC----CeEEeCCCCeeeHHHHHH--HHHHCc----------CcCCCCCcCcc
Confidence 357999999999 999999999999999999 543321 15999998754
No 9
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06 E-value=1.6e-11 Score=81.92 Aligned_cols=49 Identities=24% Similarity=0.547 Sum_probs=39.1
Q ss_pred ccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCccccccc
Q 036732 44 LECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104 (266)
Q Consensus 44 l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~ 104 (266)
++||||++.|......++.++|||.||..|+.+ |..... ..||.||+.+
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~--w~~~~~----------~~CP~CR~~~ 49 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHR--IRTDEN----------GLCPACRKPY 49 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHH--HTTTSC----------CBCTTTCCBC
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHH--HHhhcC----------CCCCccCCcC
Confidence 589999999986666677779999999999999 554322 2599999764
No 10
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.05 E-value=3.1e-11 Score=81.46 Aligned_cols=51 Identities=27% Similarity=0.692 Sum_probs=39.9
Q ss_pred CCCcccccccccccccCCCCcEEe-cCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCccccccc
Q 036732 40 REESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104 (266)
Q Consensus 40 lee~l~CpICl~~f~~~~~~P~~L-~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~ 104 (266)
++++.+|+||++.|..++ ..+.+ .|||.||..|+.+ |...+. .||+||..+
T Consensus 2 ~ed~~~C~ICl~~~~~~~-~~~~l~~C~H~Fh~~Ci~~--Wl~~~~-----------~CP~CR~~i 53 (55)
T d1iyma_ 2 MDDGVECAVCLAELEDGE-EARFLPRCGHGFHAECVDM--WLGSHS-----------TCPLCRLTV 53 (55)
T ss_dssp CCCSCCCTTTCCCCCTTS-CCEECSSSCCEECTTHHHH--TTTTCC-----------SCSSSCCCS
T ss_pred CCCCCCCeEECccccCCC-EEEEeCCCCCcccHHHHHH--HHHhCC-----------cCCCCCCEe
Confidence 467889999999998554 35555 6999999999999 654432 599999653
No 11
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.00 E-value=6.7e-11 Score=79.99 Aligned_cols=45 Identities=13% Similarity=-0.013 Sum_probs=37.7
Q ss_pred ccccccccccccCCCCcEEe-cCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccc
Q 036732 44 LECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105 (266)
Q Consensus 44 l~CpICl~~f~~~~~~P~~L-~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~ 105 (266)
|.|+||++.+. +|+++ .|||+||+.||.++ ....+ .||.||+.+.
T Consensus 1 l~C~Ic~~~~~----~Pv~~~~cGh~fc~~cI~~~-l~~~~------------~CP~c~~~l~ 46 (56)
T d2baya1 1 MLCAISGKVPR----RPVLSPKSRTIFEKSLLEQY-VKDTG------------NDPITNEPLS 46 (56)
T ss_dssp CCCTTTCSCCS----SEEEETTTTEEEEHHHHHHH-HHHHS------------BCTTTCCBCC
T ss_pred CCCccCCchHH----hcCccCCCCCcccHHHHHHH-Hhhcc------------CCCccCCcCC
Confidence 57999999999 99998 59999999999995 33332 5999998754
No 12
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=1.7e-10 Score=80.29 Aligned_cols=52 Identities=29% Similarity=0.441 Sum_probs=37.4
Q ss_pred CcccccccccccccC-CCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccc
Q 036732 42 ESLECPICWESFNMV-ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105 (266)
Q Consensus 42 e~l~CpICl~~f~~~-~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~ 105 (266)
|+.+||||++.+... ....++++|||+||..||.+ |...+. ..||.||+.+.
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~--~~~~~~----------~~CP~CR~~i~ 54 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDL--LFVRGA----------GNCPECGTPLR 54 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHH--HHHTTS----------SSCTTTCCCCS
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHH--HhCcCc----------CCCCCCCcCcc
Confidence 578999999875432 22345669999999999999 533321 15999997754
No 13
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=98.94 E-value=1.1e-10 Score=81.90 Aligned_cols=47 Identities=32% Similarity=0.675 Sum_probs=36.9
Q ss_pred CcccccccccccccCCCCcEE-ecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccc
Q 036732 42 ESLECPICWESFNMVENVPYV-LWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~-L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~ 105 (266)
...+|+||++.+. +|.+ ++|||+||..|+.+ |...+. .||.||..+.
T Consensus 4 ~~d~C~IC~~~~~----~~~~~~~C~H~Fc~~Ci~~--w~~~~~-----------~CP~CR~~i~ 51 (68)
T d1chca_ 4 VAERCPICLEDPS----NYSMALPCLHAFCYVCITR--WIRQNP-----------TCPLCKVPVE 51 (68)
T ss_dssp CCCCCSSCCSCCC----SCEEETTTTEEESTTHHHH--HHHHSC-----------STTTTCCCCC
T ss_pred CCCCCccCCcCcc----CCcEEeCCCCcCcHHHHHH--HHHhCC-----------cCCCCCcchH
Confidence 3557999999997 6655 69999999999999 544432 5999997653
No 14
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.52 E-value=2.6e-08 Score=75.84 Aligned_cols=54 Identities=22% Similarity=0.426 Sum_probs=36.2
Q ss_pred cccccccccccccC--------------CCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCccccccc
Q 036732 43 SLECPICWESFNMV--------------ENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104 (266)
Q Consensus 43 ~l~CpICl~~f~~~--------------~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~ 104 (266)
+..|+||++.+... ....+.++|||.||..||.. |...+.. .....||+||...
T Consensus 25 ~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~--Wl~~~~~------~~~~~CP~CR~~~ 92 (114)
T d1v87a_ 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLA--MYCNGNK------DGSLQCPSCKTIY 92 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHH--HHHHTCC------SSCCBCTTTCCBS
T ss_pred cccccchhheecccccccccccccccccccceEECCCCChhhHHHHHH--HHHhcCc------CCCCccccccchh
Confidence 45799999987521 11234569999999999999 5433211 1124799999653
No 15
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.34 E-value=1.2e-07 Score=69.18 Aligned_cols=48 Identities=25% Similarity=0.390 Sum_probs=33.8
Q ss_pred cccccccccccc--------------CCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCccccccc
Q 036732 44 LECPICWESFNM--------------VENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104 (266)
Q Consensus 44 l~CpICl~~f~~--------------~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~ 104 (266)
..|+||++.+.. ....++.++|||.||..||.+ |...+. .||+||...
T Consensus 22 d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~--Wl~~~~-----------~CP~CR~~~ 83 (88)
T d3dplr1 22 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISR--WLKTRQ-----------VCPLDNREW 83 (88)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHH--HHTTCS-----------BCSSSCSBC
T ss_pred CcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHH--HHHHCC-----------cCCCCCCcc
Confidence 347777766653 111345679999999999999 655442 699999764
No 16
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.24 E-value=1.8e-07 Score=63.33 Aligned_cols=49 Identities=20% Similarity=0.507 Sum_probs=36.3
Q ss_pred CCcccccccccccccCCCCcEEecC-----CChhhHHHHHHhhhhhccCCCCCCCCCCcccCccccccc
Q 036732 41 EESLECPICWESFNMVENVPYVLWC-----GHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLS 104 (266)
Q Consensus 41 ee~l~CpICl~~f~~~~~~P~~L~C-----gHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~ 104 (266)
++...|+||++.+. ++.+.+| +|.||..||.+ |...+.. ..||.||+..
T Consensus 4 ed~~~C~IC~~~~~----~~~~~~c~c~~c~h~~H~~Cl~~--W~~~~~~---------~~CP~Cr~~~ 57 (60)
T d1vyxa_ 4 EDVPVCWICNEELG----NERFRACGCTGELENVHRSCLST--WLTISRN---------TACQICGVVY 57 (60)
T ss_dssp CSCCEETTTTEECS----CCCCCSCCCSSGGGSCCHHHHHH--HHHHHTC---------SBCTTTCCBC
T ss_pred CCCCCCccCCccCC----CceeEecccCCCCCEEcHHHHHH--HHhhCCC---------CCCcccCCee
Confidence 46788999999888 6655555 59999999999 5433221 2699999764
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02 E-value=8.3e-07 Score=64.92 Aligned_cols=53 Identities=25% Similarity=0.487 Sum_probs=35.5
Q ss_pred CcccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhc-cCCCCCCCCCCcccCcccc
Q 036732 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVV-KFPTLPVQLPLFISCPWCN 101 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~-~~~~~~~~~~~~~~CP~CR 101 (266)
....|+||++.+. .+..+..++|||.||..|+..+ +..+ +... ...+.||.|+
T Consensus 4 ~~~~C~IC~~~~~-~~~~~~~~~C~H~fC~~Cl~~~-~~~~i~~~~-----~~~i~CP~~~ 57 (94)
T d1wima_ 4 GSSGCKLCLGEYP-VEQMTTIAQCQCIFCTLCLKQY-VELLIKEGL-----ETAISCPDAA 57 (94)
T ss_dssp SBCCCSSSCCCCB-GGGEEEETTTTEEEEHHHHHHH-HHHHHHHCS-----CCCEECSCTT
T ss_pred CCCcCccCCCccc-CCceEEECCCCCEeCCcCHHHH-HHHHHhcCC-----ccccCCcCCC
Confidence 4678999999875 2224556689999999999996 4322 1100 0125799865
No 18
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=78.67 E-value=0.43 Score=32.06 Aligned_cols=38 Identities=18% Similarity=0.483 Sum_probs=26.9
Q ss_pred cCCCcccccccccccccCCCCcEEecCCChhhHHHHHH
Q 036732 39 SREESLECPICWESFNMVENVPYVLWCGHTLCKNCILG 76 (266)
Q Consensus 39 ~lee~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~ 76 (266)
...+.-.|.+|...|..-.+.--=-.||+.||..|...
T Consensus 9 ~W~~~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~ 46 (72)
T d1dvpa2 9 NWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 46 (72)
T ss_dssp CCCCCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CCCcCCccccCCCcccCccccccccccCCeeChhhhCC
Confidence 34455679999998874443322238999999999854
No 19
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.37 E-value=1.2 Score=29.91 Aligned_cols=32 Identities=28% Similarity=0.618 Sum_probs=25.7
Q ss_pred CcccccccccccccCCCCcEEecC----CChhhHHHHHHh
Q 036732 42 ESLECPICWESFNMVENVPYVLWC----GHTLCKNCILGL 77 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L~C----gHtFC~~CL~~l 77 (266)
..+.|.+|.+.++ +--...| +|-||-.|-+..
T Consensus 7 ~~l~CtlC~erLE----dtHFVQCPsv~~HkFCFpCsr~s 42 (80)
T d2cs3a1 7 GPLCCTICHERLE----DTHFVQCPSVPSHKFCFPCSRES 42 (80)
T ss_dssp CSCCCSSSCSCCS----STTSEECSSCSSCEECHHHHHHH
T ss_pred Cceeeeeehhhhc----CCceEeCCCCcCCceeccccHHH
Confidence 4589999999998 4334555 899999999887
No 20
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.00 E-value=1.4 Score=24.35 Aligned_cols=13 Identities=31% Similarity=0.930 Sum_probs=11.4
Q ss_pred Ccccccccccccc
Q 036732 42 ESLECPICWESFN 54 (266)
Q Consensus 42 e~l~CpICl~~f~ 54 (266)
..++||||.+.|.
T Consensus 2 kp~~cpic~qrfk 14 (32)
T d2epqa1 2 KPYSCPVCGLRFK 14 (32)
T ss_dssp CSSEETTTTEECS
T ss_pred CCcccchHHHHhh
Confidence 4689999999988
No 21
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=54.45 E-value=2.4 Score=30.92 Aligned_cols=53 Identities=19% Similarity=0.326 Sum_probs=33.2
Q ss_pred CcccccccccccccCCCCcEEe-cCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccc
Q 036732 42 ESLECPICWESFNMVENVPYVL-WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L-~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~ 103 (266)
..-.|.+|...|....+....- .||+.+|..|-... .... ......|..|...
T Consensus 47 ~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~~~-~~~~--------~~~~w~C~~C~k~ 100 (124)
T d1zbdb_ 47 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVET-SNNR--------PHPVWLCKICLEQ 100 (124)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEEC-CCSS--------SSCCEEEHHHHHH
T ss_pred CCCcCcccCCcccCCCCCCCcCccCCcccccCCCCCc-cCCC--------CCCCEECccCcch
Confidence 3457999998876433344443 89999999995431 1111 1123579999853
No 22
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.68 E-value=2.8 Score=27.25 Aligned_cols=32 Identities=22% Similarity=0.527 Sum_probs=23.5
Q ss_pred ccccccccccccCCCCcEEe-cCCChhhHHHHHH
Q 036732 44 LECPICWESFNMVENVPYVL-WCGHTLCKNCILG 76 (266)
Q Consensus 44 l~CpICl~~f~~~~~~P~~L-~CgHtFC~~CL~~ 76 (266)
-.|.+|...|..-.+ ...- .||..||..|...
T Consensus 6 ~~C~~C~~~F~~~~r-khhCr~CG~~fC~~Cs~~ 38 (67)
T d1vfya_ 6 DACMICSKKFSLLNR-KHHCRSCGGVFCQEHSSN 38 (67)
T ss_dssp SBCTTTCCBCBTTBC-CEECTTTCCEECGGGSCE
T ss_pred cccccCCCcccCccc-ccccccCCCEecccccCC
Confidence 469999998874333 3333 7999999999754
No 23
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.90 E-value=1.9 Score=29.38 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=24.6
Q ss_pred CCCcccccccccccccCCCCcEEe--cCCChhhHHHHHH
Q 036732 40 REESLECPICWESFNMVENVPYVL--WCGHTLCKNCILG 76 (266)
Q Consensus 40 lee~l~CpICl~~f~~~~~~P~~L--~CgHtFC~~CL~~ 76 (266)
.+..+.|.||...... +...++. .|...|...|+..
T Consensus 13 ~~~~~~C~iC~~~~~~-~~~~~v~Cd~C~~~~H~~C~~p 50 (88)
T d1weva_ 13 MEMGLACVVCRQMTVA-SGNQLVECQECHNLYHQDCHKP 50 (88)
T ss_dssp HHHCCSCSSSCCCCCC-TTCCEEECSSSCCEEETTTSSS
T ss_pred CcCcCCccCCCCccCC-CCCeEEEcCCCCCccccccCCC
Confidence 3457889999875442 2234443 7999999999763
No 24
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.53 E-value=3 Score=26.83 Aligned_cols=35 Identities=23% Similarity=0.544 Sum_probs=24.7
Q ss_pred CcccccccccccccCCCCcEEecCCChhhHHHHHH
Q 036732 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNCILG 76 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~ 76 (266)
+...|.+|...|..-.+.--=-.||+.||..|...
T Consensus 7 ~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~ 41 (64)
T d1joca1 7 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 41 (64)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred cCCcCcCcCCcccCCccccchhhhCCeecccccCC
Confidence 44579999988874433322238999999999754
No 25
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.34 E-value=3 Score=22.46 Aligned_cols=14 Identities=36% Similarity=1.009 Sum_probs=12.2
Q ss_pred CCcccccccccccc
Q 036732 41 EESLECPICWESFN 54 (266)
Q Consensus 41 ee~l~CpICl~~f~ 54 (266)
++.++|.+|.+.|.
T Consensus 2 eqvftcs~cqe~f~ 15 (30)
T d2dlqa3 2 EQVFTCSVCQETFR 15 (30)
T ss_dssp CCCEECSSSCCEES
T ss_pred cceEEeHHHHHHHH
Confidence 46789999999998
No 26
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=45.38 E-value=9.9 Score=26.08 Aligned_cols=52 Identities=25% Similarity=0.480 Sum_probs=33.7
Q ss_pred Cccccccccccccc-CCCCcEEe--cCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccccc
Q 036732 42 ESLECPICWESFNM-VENVPYVL--WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSF 105 (266)
Q Consensus 42 e~l~CpICl~~f~~-~~~~P~~L--~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~ 105 (266)
....|.||-+..-. ++-++.+. -|+--.|+.|.+== .+..++ .||.|+....
T Consensus 15 ~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYE-rkeG~q-----------~CpqCkt~Yk 69 (93)
T d1weoa_ 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYE-RREGTQ-----------NCPQCKTRYK 69 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHH-HHTSCS-----------SCTTTCCCCC
T ss_pred ccchhhhcccccccCCCCCEEEEecccCCccchHHHHHH-HhccCc-----------cCcccCChhh
Confidence 46689999886543 23344443 68889999998642 333322 6999996543
No 27
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.56 E-value=3.7 Score=24.82 Aligned_cols=46 Identities=22% Similarity=0.452 Sum_probs=26.1
Q ss_pred cccccccccccCCCCcEEe--cCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCccccc
Q 036732 45 ECPICWESFNMVENVPYVL--WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102 (266)
Q Consensus 45 ~CpICl~~f~~~~~~P~~L--~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~ 102 (266)
.|.||...-. . .-+++ .|...|...|+... .... | .....||.|+.
T Consensus 2 ~C~vC~~~~~--~-~~~i~Cd~C~~~~H~~C~~p~-~~~~-----p---~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGE--D-DKLILCDECNKAFHLFCLRPA-LYEV-----P---DGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSC--C-SCCEECTTTCCEECHHHHCTT-CCSC-----C---SSCCSCTTTSC
T ss_pred CCcCcCCCCC--C-CCEEEcCCCCCCCCCCCCCCC-CCcC-----C---CCCEECcCCcC
Confidence 4677765432 1 22233 68888889998763 1111 1 12367999984
No 28
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=42.54 E-value=10 Score=19.73 Aligned_cols=14 Identities=36% Similarity=0.498 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHH
Q 036732 233 ASAAILALYILVTI 246 (266)
Q Consensus 233 ~~~~~~~~~~~~~~ 246 (266)
+|++|+..|+++.+
T Consensus 3 aslaiw~fw~ffal 16 (26)
T d1rzhh2 3 ASLAIYSFWIFLAG 16 (26)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 57778777766543
No 29
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.25 E-value=7.6 Score=24.75 Aligned_cols=31 Identities=19% Similarity=0.364 Sum_probs=22.3
Q ss_pred CcccccccccccccCCCCcEEe---cCCChhhHHHHHH
Q 036732 42 ESLECPICWESFNMVENVPYVL---WCGHTLCKNCILG 76 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L---~CgHtFC~~CL~~ 76 (266)
....|--|...+. +.... .|++.||..|=.=
T Consensus 14 ~~~~C~gC~~~l~----~~~~y~C~~C~~~FC~dCD~f 47 (59)
T d1z60a1 14 GERFCYGCQGELK----DQHVYVCAVCQNVFCVDCDVF 47 (59)
T ss_dssp SCCEETTTTEECT----TSEEECCTTTTCCBCHHHHHT
T ss_pred CCCCccCCCCcCC----CCceEECcCCCCccccccchh
Confidence 4567888888776 43322 6999999999654
No 30
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.81 E-value=3.9 Score=25.18 Aligned_cols=32 Identities=22% Similarity=0.491 Sum_probs=21.7
Q ss_pred cccccccccccCCCCcEEecCCChhhHHHHHH
Q 036732 45 ECPICWESFNMVENVPYVLWCGHTLCKNCILG 76 (266)
Q Consensus 45 ~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~ 76 (266)
.|.+|...|..-.+.--=-.||..||..|...
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~ 33 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQ 33 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC
T ss_pred CccccCCcccCCccCcccccCCcccCccccCC
Confidence 47788877774333322237999999999654
No 31
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.31 E-value=4 Score=26.78 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=23.9
Q ss_pred CcccccccccccccCCCCcEEe--cCCChhhHHHHHH
Q 036732 42 ESLECPICWESFNMVENVPYVL--WCGHTLCKNCILG 76 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L--~CgHtFC~~CL~~ 76 (266)
.-.-||-|...+......+.+. .||+.||..|-..
T Consensus 17 ~~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~ 53 (73)
T d2ct7a1 17 KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQ 53 (73)
T ss_dssp CEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSB
T ss_pred CCCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcc
Confidence 3456888877555433345444 7999999999877
No 32
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=37.12 E-value=1.9 Score=28.73 Aligned_cols=42 Identities=26% Similarity=0.533 Sum_probs=28.1
Q ss_pred cccccccccccccCCCCcEEecCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCccccccccc
Q 036732 43 SLECPICWESFNMVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFR 106 (266)
Q Consensus 43 ~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~~~~ 106 (266)
++.||.|...+.. .=||..|..|-..+ ... -.||-|+++..+
T Consensus 2 ~~~CP~C~~eL~~--------~~~~~~C~~C~~~~--~~~------------a~CPdC~~~Le~ 43 (71)
T d2jnea1 2 ELHCPQCQHVLDQ--------DNGHARCRSCGEFI--EMK------------ALCPDCHQPLQV 43 (71)
T ss_dssp CCBCSSSCSBEEE--------ETTEEEETTTCCEE--EEE------------EECTTTCSBCEE
T ss_pred CCcCCCccCcccc--------cCCCEehhhhhhhh--eeE------------EeCCccccHHHH
Confidence 4689999987661 12677888886653 222 159999987654
No 33
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.94 E-value=8.9 Score=26.15 Aligned_cols=59 Identities=15% Similarity=0.352 Sum_probs=33.4
Q ss_pred CCCcccccccccccccCCCCcEEec---CCChhhHHHHHHhhhhhc-cCC--CCCCCCCCcccCcccccc
Q 036732 40 REESLECPICWESFNMVENVPYVLW---CGHTLCKNCILGLQWAVV-KFP--TLPVQLPLFISCPWCNLL 103 (266)
Q Consensus 40 lee~l~CpICl~~f~~~~~~P~~L~---CgHtFC~~CL~~l~~~~~-~~~--~~~~~~~~~~~CP~CR~~ 103 (266)
...+..|+|| +.+. .-..+| |+..|...|++++-.... ... ..-.--...++|+.|...
T Consensus 12 v~~D~mC~vC-~v~t----~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC~~C~nl 76 (89)
T d1wila_ 12 VVNDEMCDVC-EVWT----AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCCSCCCTTT-CCCC----SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcCcccccc-Cccc----ccceecceeecchhhHHHHHHhcccccHHHHHHHHhhcCCCCcchhhhcch
Confidence 3457789999 6666 222344 788899999988511111 000 000111224789999754
No 34
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=31.35 E-value=16 Score=23.76 Aligned_cols=56 Identities=20% Similarity=0.305 Sum_probs=30.7
Q ss_pred CCcccccccccccccCCCCcEEe---cCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCcccccc
Q 036732 41 EESLECPICWESFNMVENVPYVL---WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103 (266)
Q Consensus 41 ee~l~CpICl~~f~~~~~~P~~L---~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~~ 103 (266)
++...| ||.+.... ..-+.. .|..-|...|+.-. -... ..+...+..+.||.|+..
T Consensus 14 ~~~~~C-~C~~~~~~--~~~i~c~c~~C~~W~H~~Cvgi~-~~~~---~~~~~~~~~~~C~~C~~~ 72 (78)
T d1wewa_ 14 EIKVRC-VCGNSLET--DSMIQCEDPRCHVWQHVGCVILP-DKPM---DGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCCCC-SSCCCCCC--SCEEECSSTTTCCEEEHHHHSCC-CTTT---CSCSCSCSSCCCHHHHHC
T ss_pred CCccEe-ECCCccCC--CcEEEEeCCCCCcCCCccccCcc-cccc---ccccCCCCEEECCCCcCc
Confidence 356788 99886651 112334 38888889998421 0000 111122334679999843
No 35
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=29.82 E-value=25 Score=19.75 Aligned_cols=21 Identities=14% Similarity=0.423 Sum_probs=9.8
Q ss_pred HHHHHHHHhhhHHHHHHHHHH
Q 036732 222 IFLLIVVYAIPASAAILALYI 242 (266)
Q Consensus 222 ~fl~~~~~~~~~~~~~~~~~~ 242 (266)
+|+.-.++++-..++.++||+
T Consensus 7 g~iAt~LFilvPt~FLliLyv 27 (36)
T d2axtm1 7 GLIATALFVLVPSVFLIILYV 27 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhe
Confidence 344444444444444555553
No 36
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=29.33 E-value=21 Score=22.02 Aligned_cols=13 Identities=23% Similarity=0.621 Sum_probs=9.8
Q ss_pred ccccccccccccc
Q 036732 43 SLECPICWESFNM 55 (266)
Q Consensus 43 ~l~CpICl~~f~~ 55 (266)
...|.+|.-+|+.
T Consensus 3 ky~C~~CgyiYd~ 15 (53)
T d1iroa_ 3 KYTCTVCGYIYNP 15 (53)
T ss_dssp CEEETTTCCEECT
T ss_pred CeEcCCCCcEECc
Confidence 4678888887773
No 37
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=26.52 E-value=22 Score=21.88 Aligned_cols=13 Identities=38% Similarity=0.667 Sum_probs=9.4
Q ss_pred CCCcccCcccccc
Q 036732 91 LPLFISCPWCNLL 103 (266)
Q Consensus 91 ~~~~~~CP~CR~~ 103 (266)
++..+.||.|...
T Consensus 32 LP~dw~CP~C~a~ 44 (53)
T d1brfa_ 32 LPDDWVCPICGAP 44 (53)
T ss_dssp SCTTCBCTTTCCB
T ss_pred CCCCCCCcCCCCc
Confidence 4445789999854
No 38
>d1v54b2 f.17.2.1 (B:1-90) Mitochondrial cytochrome c oxidase, subunit II {Cow (Bos taurus) [TaxId: 9913]}
Probab=25.87 E-value=16 Score=24.73 Aligned_cols=16 Identities=56% Similarity=0.978 Sum_probs=11.5
Q ss_pred HHHHHHHhhHhhhhhh
Q 036732 243 LVTILFALPSFLILYF 258 (266)
Q Consensus 243 ~~~~~~~~~~~~~~~~ 258 (266)
+|=++.|+||+-.||.
T Consensus 71 lILi~ia~PSl~lLY~ 86 (90)
T d1v54b2 71 IILILIALPSLRILYM 86 (90)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445678888888885
No 39
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=25.61 E-value=27 Score=21.40 Aligned_cols=13 Identities=38% Similarity=0.705 Sum_probs=9.5
Q ss_pred CCCcccCcccccc
Q 036732 91 LPLFISCPWCNLL 103 (266)
Q Consensus 91 ~~~~~~CP~CR~~ 103 (266)
++..+.||.|...
T Consensus 33 LP~~w~CP~C~a~ 45 (52)
T d2dsxa1 33 LPDDWACPVCGAS 45 (52)
T ss_dssp SCTTCBCTTTCCB
T ss_pred CCCCCCCcCCCCc
Confidence 4455789999854
No 40
>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.82 E-value=26 Score=23.09 Aligned_cols=29 Identities=17% Similarity=0.541 Sum_probs=21.8
Q ss_pred CcccccccccccccCCCCcEEecCCChhhHHH
Q 036732 42 ESLECPICWESFNMVENVPYVLWCGHTLCKNC 73 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L~CgHtFC~~C 73 (266)
....|.+|..-+.. .++.-.||..||...
T Consensus 24 k~~RC~~C~KKl~l---~~~~CrCg~~FC~~H 52 (74)
T d1wfla_ 24 KKNRCFMCRKKVGL---TGFDCRCGNLFCGLH 52 (74)
T ss_dssp CTTBCSSSCCBCGG---GCEECTTSCEECSSS
T ss_pred CCCcChhhCCcccc---eeeEccCCCEehhhc
Confidence 35689999976652 356779999999854
No 41
>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.81 E-value=24 Score=22.59 Aligned_cols=31 Identities=19% Similarity=0.653 Sum_probs=23.0
Q ss_pred CCcccccccccccccCCCCcEEecCCChhhHHHH
Q 036732 41 EESLECPICWESFNMVENVPYVLWCGHTLCKNCI 74 (266)
Q Consensus 41 ee~l~CpICl~~f~~~~~~P~~L~CgHtFC~~CL 74 (266)
+..-.|..|..-+.. .++.-.||+.||....
T Consensus 13 ~k~~RC~~C~KKl~l---~~~~CrCg~~FC~~HR 43 (64)
T d1wfha_ 13 QRPNRCTVCRKRVGL---TGFMCRCGTTFCGSHR 43 (64)
T ss_dssp SSCCCCTTTCCCCCT---TCEECSSSCEECTTTC
T ss_pred CCCCcChhhCCCccc---eeeeccCCCEehhhcC
Confidence 456689999987652 3567799999998543
No 42
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=23.24 E-value=36 Score=22.09 Aligned_cols=15 Identities=27% Similarity=0.518 Sum_probs=11.6
Q ss_pred CCccccccccccccc
Q 036732 41 EESLECPICWESFNM 55 (266)
Q Consensus 41 ee~l~CpICl~~f~~ 55 (266)
.....|.+|.-+|+.
T Consensus 5 ~~ky~C~~CgyiYDp 19 (70)
T d1dx8a_ 5 EGKYECEACGYIYEP 19 (70)
T ss_dssp SSCEEETTTCCEECT
T ss_pred CCeEEcCCCCeEECc
Confidence 356789999988874
No 43
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.77 E-value=13 Score=23.15 Aligned_cols=51 Identities=22% Similarity=0.313 Sum_probs=30.2
Q ss_pred CcccccccccccccCCCCcEEe--cCCChhhHHHHHHhhhhhccCCCCCCCCCCcccCccccc
Q 036732 42 ESLECPICWESFNMVENVPYVL--WCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNL 102 (266)
Q Consensus 42 e~l~CpICl~~f~~~~~~P~~L--~CgHtFC~~CL~~l~~~~~~~~~~~~~~~~~~~CP~CR~ 102 (266)
....|.+|.+..... .-++. .|+.-|...|+... ..... ....+.||.|+.
T Consensus 5 ~~~~C~~C~~~~~~~--~~~I~Cd~C~~w~H~~C~~~~-~~~~~-------~~~~w~C~~C~~ 57 (64)
T d1we9a_ 5 SSGQCGACGESYAAD--EFWICCDLCEMWFHGKCVKIT-PARAE-------HIKQYKCPSCSN 57 (64)
T ss_dssp SCCCCSSSCCCCCSS--SCEEECSSSCCEEETTTTTCC-TTGGG-------GCSSCCCHHHHT
T ss_pred CCCcCcCcCCCCCCC--CCEEEcCCCCccCCcccCCcC-hHHCC-------CCCeEECcCCcC
Confidence 456899998876521 22232 68888888888532 11111 112357999984
Done!