BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036733
(96 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 11 MPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSL 70
MP +L L++LQ KD IFAEPV+ EV DY E I +PMDF TMR KL +Y +L
Sbjct: 592 MPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTL 651
Query: 71 EQFE--VCSFFTLCLKFWSIGILF 92
E+FE T C+K+ + +F
Sbjct: 652 EEFEEDFNLIVTNCMKYNAKDTIF 675
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P +L +L+ LQ KD IFA+PV KEV DY + IK PMDF TMR +L Y +L
Sbjct: 566 PLTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLH 625
Query: 72 QFE 74
+FE
Sbjct: 626 EFE 628
>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
Length = 1214
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 35/59 (59%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQFE 74
+L L LQ KDT IF+EPV EV DY + IK+PMDF TM+ L Y + + FE
Sbjct: 636 LLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFE 694
>sp|Q6GLP7|BRD9_XENLA Bromodomain-containing protein 9 OS=Xenopus laevis GN=brd9 PE=2
SV=1
Length = 527
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 6 PSAPQMPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEG 65
P P +++LE L LQRKD N FA PV + Y+ IIK PMDF TM+ K+ +
Sbjct: 76 PENESTPLQQLLEYFLRQLQRKDPNGFFAFPVTDQIAPGYFMIIKNPMDFSTMKEKISQD 135
Query: 66 MYTSLEQFEVCSFFTLC 82
Y S+ +F+ F +C
Sbjct: 136 EYKSVTEFKA-DFKLMC 151
>sp|Q3UQU0|BRD9_MOUSE Bromodomain-containing protein 9 OS=Mus musculus GN=Brd9 PE=2 SV=1
Length = 596
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 QPSSVPSAPQMPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRA 60
QP+ S P +R+LE L LQRKD + FA PV Y IIK PMDFGTM+
Sbjct: 132 QPAENESTPI---QRLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKD 188
Query: 61 KLHEGMYTSLEQFEVCSFFTLC 82
K+ Y S+ +F+ F +C
Sbjct: 189 KIVANEYKSVTEFKA-DFKLMC 209
>sp|Q6NVM8|BRD9_XENTR Bromodomain-containing protein 9 OS=Xenopus tropicalis GN=brd9 PE=2
SV=1
Length = 596
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P +++LE L LQRKD N FA PV + Y+ IIK PMDF TM+ K+ + Y S+
Sbjct: 152 PLQQLLEYFLRQLQRKDPNGFFAFPVTDQIAPGYFMIIKNPMDFSTMKEKISQNEYKSVT 211
Query: 72 QFEVCSFFTLC 82
+F+ F +C
Sbjct: 212 EFKA-DFKLMC 221
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 18 ELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQFEVCS 77
E+IL ++ D F EPV+ + V Y IIK PMDF TMR +L G YTS E+F +
Sbjct: 1803 EIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADA 1862
Query: 78 F--FTLCLKF 85
F C F
Sbjct: 1863 LLVFDNCQTF 1872
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 33 FAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
F EPVD KE DYY++IKEPMD M KL YT L +F
Sbjct: 2581 FMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEF 2621
>sp|Q9H8M2|BRD9_HUMAN Bromodomain-containing protein 9 OS=Homo sapiens GN=BRD9 PE=1 SV=2
Length = 597
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 QPSSVPSAPQMPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRA 60
QP+ S P +++LE L LQRKD + FA PV Y IIK PMDFGTM+
Sbjct: 132 QPAENESTPI---QQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKD 188
Query: 61 KLHEGMYTSLEQFEVCSFFTLC 82
K+ Y S+ +F+ F +C
Sbjct: 189 KIVANEYKSVTEFKA-DFKLMC 209
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 18 ELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQFEVCS 77
E+IL ++ D F EPV+ + V Y +IK PMDF TMR +L G YTS E+F +
Sbjct: 1787 EIILMEMESHDAAWPFLEPVNPRLVSGYRRVIKNPMDFSTMRERLLRGGYTSSEEFAADA 1846
Query: 78 F--FTLCLKF 85
F C F
Sbjct: 1847 LLVFDNCQTF 1856
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P + +L+ L + F+ PV+ +EV DYY++IKEPMD TM +KL Y S +
Sbjct: 346 PHYNFMVTLLSELTNHPSAWPFSTPVNKEEVGDYYDVIKEPMDLSTMESKLENDKYDSFD 405
Query: 72 QF 73
QF
Sbjct: 406 QF 407
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P V++ +L+ LQ + FA+ V+ EV DYYE+IKEPMD TM +L Y ++E
Sbjct: 356 PHFAVMQHVLSELQNHASAWPFAQAVNRDEVPDYYEVIKEPMDLSTMEQRLEADSYKTME 415
Query: 72 QF 73
+F
Sbjct: 416 EF 417
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 33/62 (53%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P ++ IL LQ F PV+ +EV DYYE IKEPMD TM KL Y +E
Sbjct: 438 PHYAAIQNILVELQNHAAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKME 497
Query: 72 QF 73
+F
Sbjct: 498 EF 499
>sp|Q9BXF3|CECR2_HUMAN Cat eye syndrome critical region protein 2 OS=Homo sapiens GN=CECR2
PE=1 SV=2
Length = 1484
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 6 PSAPQMPEKRVLEL------------ILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPM 53
P++P EK+ +L +L++++ + F EPVD +YY+IIK PM
Sbjct: 420 PNSPMREEKKTKDLFELDDDFTAMYKVLDVVKAHKDSWPFLEPVDESYAPNYYQIIKAPM 479
Query: 54 DFGTMRAKLHEGMYTSLEQF--EVCSFFTLCLKF 85
D +M KL+ G+Y + E+F ++ + F C K+
Sbjct: 480 DISSMEKKLNGGLYCTKEEFVNDMKTMFRNCRKY 513
>sp|Q7ZUF2|BRD9_DANRE Bromodomain-containing protein 9 OS=Danio rerio GN=brd9 PE=2 SV=1
Length = 631
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P +++LE L +LQRKD + FA PV Y IIK PMDF TM+ K+ Y ++
Sbjct: 170 PHQQLLEHFLRLLQRKDAHGFFAFPVTDAIAPGYSMIIKHPMDFSTMKDKIAANEYKTIT 229
Query: 72 QFEVCSFFTLC 82
+F+ F +C
Sbjct: 230 EFK-ADFKLMC 239
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 10 QMPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTS 69
Q P+ E+IL L+ + F EPV+ + V Y +IIK PMDF TMR KL G Y+
Sbjct: 1587 QSPDLTFCEIILMELESHEDAWPFLEPVNPRLVPGYRKIIKNPMDFSTMRHKLLNGNYSR 1646
Query: 70 LEQF 73
E+F
Sbjct: 1647 CEEF 1650
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
VLE++ +Q ++ F +PV ++V DYYE+I+ PMD TM +L Y S+E+F
Sbjct: 351 VLEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEF 408
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 13 EKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQ 72
+K+ EL+ I Q +D+ E F +PVD E DY +II PMDFGT+R L G Y S +
Sbjct: 1319 KKQCKELVNLIFQCEDS-EPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLE 1377
Query: 73 F 73
F
Sbjct: 1378 F 1378
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P ++ IL LQ F +PV+ +EV DYY+ IKEPMD TM KL Y +E
Sbjct: 331 PHDAAIQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKME 390
Query: 72 QF 73
F
Sbjct: 391 DF 392
>sp|Q756G9|GCN5_ASHGO Histone acetyltransferase GCN5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GCN5
PE=3 SV=1
Length = 452
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P ++ +L LQ F +PV+ EV DYYE IKEPMD TM KL Y +E
Sbjct: 344 PHYATMQNVLTELQNHAAAWPFLQPVNRDEVPDYYEFIKEPMDLSTMEIKLENNRYEKME 403
Query: 72 QF 73
F
Sbjct: 404 DF 405
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 19 LILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
L++ I Q +D+ E F +PVD E DY +II PMDFGT+R L G Y S +F
Sbjct: 1327 LLILIFQCEDS-EPFRQPVDLDEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVEF 1380
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 33 FAEPVDTKEVEDYYEIIKEPMDFGTMRAKLH-EGMYTSLEQF 73
F EPVD+++V DYY+IIK+P+D TM ++ E Y +LE F
Sbjct: 423 FKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMF 464
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 9 PQMPEKRVLELILNILQRKDTNE---IFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEG 65
P+ + + L L IL +T+E F PV+ K V Y ++IK+PMDF T+R KL G
Sbjct: 2058 PKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSG 2117
Query: 66 MYTSLEQF 73
Y +LE F
Sbjct: 2118 QYPNLETF 2125
>sp|P51123|TAF1_DROME Transcription initiation factor TFIID subunit 1 OS=Drosophila
melanogaster GN=Taf1 PE=1 SV=3
Length = 2129
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
+LE+I N L+ F PV K+V DYY ++ +PMD TMR + + YTS E F
Sbjct: 1478 ILEIIHNELRSMPDVSPFLFPVSAKKVPDYYRVVTKPMDLQTMREYIRQRRYTSREMF 1535
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 33 FAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
F +PV+ K+V+DYY +IK PMD T+ + Y S ++
Sbjct: 1617 FLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEY 1657
>sp|Q6CXW4|GCN5_KLULA Histone acetyltransferase GCN5 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GCN5 PE=3 SV=1
Length = 516
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLE 71
P ++ +L LQ F +PV+ +EV DYYE IKEPMD +M KL+ Y +E
Sbjct: 408 PHYAAMQNLLTELQNHAAAWPFLQPVNKEEVPDYYEFIKEPMDLSSMEMKLNGNRYEKME 467
Query: 72 QF--EVCSFFTLCLKF 85
F + F C +
Sbjct: 468 NFIYDARLIFNNCRAY 483
>sp|Q8VDD9|PHIP_MOUSE PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2
Length = 1821
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 14 KRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
K+ + +LN++ + + +E F +PVD E DY +II PMDF T+R L G Y S
Sbjct: 1322 KKQCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYES--PM 1379
Query: 74 EVC 76
E+C
Sbjct: 1380 ELC 1382
>sp|Q8IZX4|TAF1L_HUMAN Transcription initiation factor TFIID subunit 1-like OS=Homo sapiens
GN=TAF1L PE=1 SV=1
Length = 1826
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
+LE I+N ++ F PV+ K V+DYY+II PMD T+R + + +Y S E+F
Sbjct: 1407 ILESIINDMRDLPNTHPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEF 1464
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 33 FAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
F PV+ K V DYY++I P+D T+R + + Y S E F
Sbjct: 1547 FHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESF 1587
>sp|Q67W65|TAF1_ORYSJ Transcription initiation factor TFIID subunit 1 OS=Oryza sativa
subsp. japonica GN=TAF1 PE=2 SV=1
Length = 1810
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
+LE I++ L+ + +F +PV KE DY++II+ PMD GT+R K+ + Y + E F
Sbjct: 1700 ILEKIVDHLRTMSCSFLFRKPVTKKEAPDYFDIIERPMDLGTIRDKVRKMEYKNREDF 1757
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 17 LELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF--E 74
L+ +L LQ F EPVD + DYY +IKEPMD TM ++ Y L +F +
Sbjct: 2936 LKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVAD 2995
Query: 75 VCSFFTLC 82
+ F C
Sbjct: 2996 MTKIFDNC 3003
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 33 FAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
F EPV E EDYY++I+ PMDF T++ K G Y S+++F
Sbjct: 1360 FREPVTRDEAEDYYDVIEHPMDFQTIQNKCSCGNYRSVQEF 1400
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 33 FAEPVD--TKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQFE--VCSFFTLCLKFWSI 88
F +PVD + DY+++IKEPMD T+++KL++ Y++LE+FE + F C +
Sbjct: 279 FYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPP 338
Query: 89 GI 90
G
Sbjct: 339 GT 340
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 12 PEKRVLELILNILQRKDTNEIFAEPVD--TKEVEDYYEIIKEPMDFGTMRAKLHEGMYTS 69
P+++ I+ L+R + F PVD + + DY I+K PMD GT+ KL Y+
Sbjct: 88 PQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSV 147
Query: 70 LEQF--EVCSFFTLCL 83
++F ++ F+ C
Sbjct: 148 PQEFIDDMNLMFSNCF 163
>sp|Q60544|TAF1_MESAU Transcription initiation factor TFIID subunit 1 OS=Mesocricetus
auratus GN=TAF1 PE=2 SV=1
Length = 1865
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
+LE I+N ++ F PV+ K V+DYY+II PMD T+R + + +Y S E+F
Sbjct: 1383 ILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1440
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 33 FAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
F PV+ K V DYY++I PMD T+R + + Y S E F
Sbjct: 1523 FHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESF 1563
>sp|Q80UV9|TAF1_MOUSE Transcription initiation factor TFIID subunit 1 OS=Mus musculus
GN=Taf1 PE=2 SV=2
Length = 1891
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
+LE I+N ++ F PV+ K V+DYY+II PMD T+R + + +Y S E+F
Sbjct: 1409 ILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1466
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 33 FAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
F PV+ K V DYY++I PMD T+R + + Y S E F
Sbjct: 1549 FHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESF 1589
>sp|P21675|TAF1_HUMAN Transcription initiation factor TFIID subunit 1 OS=Homo sapiens
GN=TAF1 PE=1 SV=2
Length = 1872
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
+LE I+N ++ F PV+ K V+DYY+II PMD T+R + + +Y S E+F
Sbjct: 1388 ILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEF 1445
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 33 FAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
F PV+ K V DYY++I PMD T+R + + Y S E F
Sbjct: 1528 FHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESF 1568
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 20/90 (22%)
Query: 4 SVPSAPQMPEKRVLELILNILQ--RKDTNEI------------------FAEPVDTKEVE 43
S P AP + + V EL+L + R+ + E+ F EPV E E
Sbjct: 1315 SQPKAPPVDDAEVDELVLQTKRSSRRQSLELQKCEEILHKIVKYRFSWPFREPVTRDEAE 1374
Query: 44 DYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
DYY++I PMDF T++ K G Y S+++F
Sbjct: 1375 DYYDVITHPMDFQTVQNKCSCGSYRSVQEF 1404
>sp|Q8LRK9|TAF1A_ARATH Transcription initiation factor TFIID subunit 1-A OS=Arabidopsis
thaliana GN=HAF1 PE=2 SV=1
Length = 1919
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 11/76 (14%)
Query: 8 APQMPEKR---------VLELILNILQ-RKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGT 57
APQ P++R +LE I++ L+ +++ + +F +PV KE DY +I++ PMD T
Sbjct: 1790 APQ-PKRRKKGEVGLANILERIVDTLRLKEEVSRLFLKPVSKKEAPDYLDIVENPMDLST 1848
Query: 58 MRAKLHEGMYTSLEQF 73
+R K+ + Y + EQF
Sbjct: 1849 IRDKVRKIEYRNREQF 1864
>sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=6
Length = 2017
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 1 QPSSVPSAPQM-PEKRVLELILNILQRKDTNE---IFAEPVDTK--EVEDYYEIIKEPMD 54
+P+ P+ + ++ +++ +L + ++ D +E F PVD K + DY+EIIK PMD
Sbjct: 853 EPTPPPTEDTVFSQEDLIKFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMD 912
Query: 55 FGTMRAKLHEGMYTSLEQF 73
T+ KL+ G Y + QF
Sbjct: 913 LETVHKKLYAGQYQNAGQF 931
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 20 ILNILQRKDTNEIFAEPVD--TKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
++N + +K T+ F PVD + + DY+++IK PMD GT++ KL Y++++ F
Sbjct: 528 LINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDF 583
>sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2
Length = 1821
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 14 KRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
K+ E +LN++ + + +E F +PVD E DY +II PMDF T+R L G Y S
Sbjct: 1322 KKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYES--PM 1379
Query: 74 EVC 76
E+C
Sbjct: 1380 ELC 1382
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQFEV 75
+ +IL+ L+ + F PV+ K V Y ++IK+PMDF T+R KL G Y ++E F +
Sbjct: 2030 ICSMILSELETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIRDKLTSGQYPNVEAFSL 2089
>sp|Q5ZKG2|BRD7_CHICK Bromodomain-containing protein 7 OS=Gallus gallus GN=BRD7 PE=2 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 10 QMPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTS 69
Q P + L ++ LQRKD + F+ PV Y IIK PMDF TM+ K+ Y S
Sbjct: 133 QTPLQEALNQLMRQLQRKDPSSFFSFPVTDFIAPGYSMIIKNPMDFSTMKEKIKNNGYQS 192
Query: 70 LEQFEVCSFFTLC 82
+E+ + +F +C
Sbjct: 193 IEELK-DNFKLMC 204
>sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens
GN=ATAD2B PE=1 SV=3
Length = 1458
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 32 IFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
IF++PVD +EV DY E+IKEPMD T+ K+ + Y + + F
Sbjct: 982 IFSKPVDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTAKDF 1023
>sp|O88665|BRD7_MOUSE Bromodomain-containing protein 7 OS=Mus musculus GN=Brd7 PE=1 SV=1
Length = 651
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 10 QMPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTS 69
Q P + L ++ LQRKD + F+ PV Y IIK PMDF TM+ K+ Y S
Sbjct: 133 QTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQS 192
Query: 70 LEQFEVCSFFTLC 82
+E+ + +F +C
Sbjct: 193 IEELKD-NFKLMC 204
>sp|Q9HGP4|YK82_SCHPO Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC631.02 PE=1 SV=3
Length = 727
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 33 FAEPVDTKEV--EDYYEIIKEPMDFGTMRAKLHEGMYTSLEQFE--VCSFFTLCLKFWSI 88
F +PV+ DY+++IK PMD GTM+ KL+ Y S++ FE + F C KF S
Sbjct: 416 FYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSA 475
Query: 89 G 89
G
Sbjct: 476 G 476
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 13 EKRVLELILNILQRKDTNEIFAEPVD--TKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSL 70
+ + + +L L+R + F PVD + + DY IIK P+D GTM+ K G+Y+S
Sbjct: 234 QHKYIHAMLRQLRRGRDSIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSA 293
Query: 71 EQF 73
+ F
Sbjct: 294 QHF 296
>sp|Q9NPI1|BRD7_HUMAN Bromodomain-containing protein 7 OS=Homo sapiens GN=BRD7 PE=1 SV=1
Length = 651
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 10 QMPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTS 69
Q P + L ++ LQRKD + F+ PV Y IIK PMDF TM+ K+ Y S
Sbjct: 133 QTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQS 192
Query: 70 LEQFEVCSFFTLC 82
+E+ + +F +C
Sbjct: 193 IEELKD-NFKLMC 204
>sp|Q5R8B0|BRD7_PONAB Bromodomain-containing protein 7 OS=Pongo abelii GN=BRD7 PE=2 SV=1
Length = 651
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 10 QMPEKRVLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLHEGMYTS 69
Q P + L ++ LQRKD + F+ PV Y IIK PMDF TM+ K+ Y S
Sbjct: 133 QTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQS 192
Query: 70 LEQFEVCSFFTLC 82
+E+ + +F +C
Sbjct: 193 IEELKD-NFKLMC 204
>sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana
GN=GTE3 PE=1 SV=1
Length = 461
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 20 ILNILQRKDTNEIFAEPVD--TKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
+L L + + IF PVD T + DY+ IIKEPMD GT++ +L + +Y S +F
Sbjct: 126 LLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEF 181
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 1 QPSSVPSAPQMPEKRVLEL------ILNILQRKDTNEIFAEPVDTKEVE--DYYEIIKEP 52
QP +P A + P + +L ++ ++ + + F +PVD K++ DY++IIK+P
Sbjct: 22 QPPVIPPA-ERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQP 80
Query: 53 MDFGTMRAKLHEGMYTSLEQ 72
MD GT++ +L Y S ++
Sbjct: 81 MDMGTIKKRLENNYYWSAKE 100
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 33 FAEPVDTKEV--EDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF--EVCSFFTLCLKF 85
F +PVD + + DY++IIK+PMD GT++ K+ Y S +F +V FT C K+
Sbjct: 503 FYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKY 559
>sp|Q9LS28|GTE12_ARATH Transcription factor GTE12 OS=Arabidopsis thaliana GN=GTE12 PE=2
SV=2
Length = 494
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 32 IFAEPVD--TKEVEDYYEIIKEPMDFGTMRAKLHEGMYTSLEQF 73
+F EPVD E+ DY+ +I++PMD GT+++KL + +Y++ ++F
Sbjct: 88 LFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEF 131
>sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1
SV=1
Length = 568
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 16 VLELILNILQRKDTNEIFAEPVDTKEVEDYYEIIKEPMDFGTMRAKLH-EGMYTSLEQF 73
++ +L +Q F EPVD+++V DYY+IIK+P+D + ++ E Y +L+ F
Sbjct: 463 LMRALLKTMQDHADAWPFKEPVDSRDVPDYYDIIKDPIDLKVIAKRVESEQYYVTLDMF 521
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,892,177
Number of Sequences: 539616
Number of extensions: 1356764
Number of successful extensions: 3676
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3484
Number of HSP's gapped (non-prelim): 210
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)