BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036739
(323 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 397 bits (1019), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 123 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 164
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 165 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 273 PNKRISAKAALAHPFFQDV 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 121 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 162
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 163 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 271 PNKRISAKAALAHPFFQDV 289
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 396 bits (1017), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 129 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 170
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 171 ------------VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 218
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 219 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 278
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 279 PNKRISAKAALAHPFFQDV 297
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 129 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 170
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 171 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 218
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 219 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 278
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 279 PNKRISAKAALAHPFFQDV 297
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+++CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 126 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 167
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 168 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 215
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 216 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 275
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 276 PNKRISAKAALAHPFFQDV 294
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L +DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKP+NLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 125 HRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 166
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 167 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 275 PNKRISAKAALAHPFFQDV 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L +DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKP+NLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 123 HRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 164
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 165 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 273 PNKRISAKAALAHPFFQDV 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 241/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE++D DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 125 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 166
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 167 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 275 PNKRISAKAALAHPFFQDV 293
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 123 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 164
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 165 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 273 PNKRISAKAALAHPFFQDV 291
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 125 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 166
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 167 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 275 PNKRISAKAALAHPFFQDV 293
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L +DLK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 125 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 166
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 167 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 275 PNKRISAKAALAHPFFQDV 293
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 124 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 165
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 166 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 273
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 274 PNKRISAKAALAHPFFQDV 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 121 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 162
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 163 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 271 PNKRISAKAALAHPFFQDV 289
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 125 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 166
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 167 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 275 PNKRISAKAALAHPFFQDV 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +AL KIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +AL KIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 121 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 162
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 163 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 271 PNKRISAKAALAHPFFQDV 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 121 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 162
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 163 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 271 PNKRISAKAALAHPFFQDV 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 126 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 167
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 168 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 215
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 216 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 275
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 276 PNKRISAKAALAHPFFQDV 294
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/318 (61%), Positives = 240/318 (75%), Gaps = 30/318 (9%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHSH
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
RVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 122 RVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE------------------ 162
Query: 182 LAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDE 241
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID+
Sbjct: 163 -----------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
Query: 242 LFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDP 301
LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML DP
Sbjct: 212 LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 271
Query: 302 SRRITARSALEHEYFRDV 319
++RI+A++AL H +F+DV
Sbjct: 272 NKRISAKAALAHPFFQDV 289
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L +DLK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 124 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 165
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 166 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 273
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 274 PNKRISAKAALAHPFFQDV 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 124 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 165
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 166 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 273
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 274 PNKRISAKAALAHPFFQDV 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 123 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 164
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 165 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 273 PNKRISAKAALAHPFFQDV 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/318 (61%), Positives = 239/318 (75%), Gaps = 30/318 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 122 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRD 318
P++RI+A++AL H +F+D
Sbjct: 272 PNKRISAKAALAHPFFQD 289
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE++ DLK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+THE
Sbjct: 121 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHE----------------- 162
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 163 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 270
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 271 PNKRISAKAALAHPFFQDV 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKP+NLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 123 HRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 164
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 165 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 272
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 273 PNKRISAKAALAHPFFQDV 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 240/319 (75%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLKK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKP+NLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 124 HRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 165
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 166 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 273
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 274 PNKRISAKAALAHPFFQDV 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 239/319 (74%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKPQNLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 125 HRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 166
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 167 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 274
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 275 PNKRISAKAALAHPFFQDV 293
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 390 bits (1002), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/319 (60%), Positives = 239/319 (74%), Gaps = 30/319 (9%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ ++KVEKIGEGTYGVVYKARN +T E +ALKKIRL+ E EGVPSTAIREISLLKE+ H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H+E KLYLVFE+L DLK MD+ LIK++L+Q+L+G+A+CHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HRVLHRDLKP+NLLI+ A+KLADFGLARAFG+PVRT+ HE
Sbjct: 122 HRVLHRDLKPENLLINTE-GAIKLADFGLARAFGVPVRTYXHE----------------- 163
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAPEILLG ++YST VD+WS+GCIFAEMV +R LFPGDSEID
Sbjct: 164 ------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+LF+IFR LGTP+E WPGVTS+PD+K +FPKW ++ VV L+ G LLS+ML D
Sbjct: 212 QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271
Query: 301 PSRRITARSALEHEYFRDV 319
P++RI+A++AL H +F+DV
Sbjct: 272 PNKRISAKAALAHPFFQDV 290
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/318 (57%), Positives = 228/318 (71%), Gaps = 32/318 (10%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M++Y +EKIGEGTYGVVYKA+N ET ALKKIRLE+EDEG+PST IREIS+LKE++H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H++K+L LVFE+LD DLKK +D C + + K+FL Q+L GIAYCH
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
RVLHRDLKPQNLLI+R LK+ADFGLARAFGIPVR +THE
Sbjct: 119 RRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHE----------------- 160
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAP++L+GS+ YST +D+WSVGCIFAEMVN PLFPG SE D
Sbjct: 161 ------------VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+L +IFR+LGTPN WP VT LP + F + + ++ L+ +GIDLLSKML +D
Sbjct: 209 QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLD 268
Query: 301 PSRRITARSALEHEYFRD 318
P++RITA+ ALEH YF++
Sbjct: 269 PNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/318 (57%), Positives = 228/318 (71%), Gaps = 32/318 (10%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M++Y +EKIGEGTYGVVYKA+N ET ALKKIRLE+EDEG+PST IREIS+LKE++H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H++K+L LVFE+LD DLKK +D C + + K+FL Q+L GIAYCH
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
RVLHRDLKPQNLLI+R LK+ADFGLARAFGIPVR +THE
Sbjct: 119 RRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHE----------------- 160
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAP++L+GS+ YST +D+WSVGCIFAEMVN PLFPG SE D
Sbjct: 161 ------------VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEAD 208
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+L +IFR+LGTPN WP VT LP + F + + ++ L+ +GIDLLSKML +D
Sbjct: 209 QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLD 268
Query: 301 PSRRITARSALEHEYFRD 318
P++RITA+ ALEH YF++
Sbjct: 269 PNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/318 (57%), Positives = 228/318 (71%), Gaps = 32/318 (10%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M++Y +EKIGEGTYGVVYKA+N ET ALKKIRLE+EDEG+PST IREIS+LKE++H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV+L DV+H++K+L LVFE+LD DLKK +D C + + K+FL Q+L GIAYCH
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
RVLHRDLKPQNLLI+R LK+ADFGLARAFGIPVR +THE
Sbjct: 119 RRVLHRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHE----------------- 160
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
+VTLWYRAP++L+GS+ YST +D+WSVGCIFAEMVN PLFPG SE D
Sbjct: 161 ------------IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+L +IFR+LGTPN WP VT LP + F + + ++ L+ +GIDLLSKML +D
Sbjct: 209 QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLD 268
Query: 301 PSRRITARSALEHEYFRD 318
P++RITA+ ALEH YF++
Sbjct: 269 PNQRITAKQALEHAYFKE 286
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 358 bits (920), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 236/328 (71%), Gaps = 36/328 (10%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+D+Y ++ K+GEGTYG VYKA + VTNET+A+K+IRLE E+EGVP TAIRE+SLLKE+QH
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NI+ L+ V+H +L+L+FEY + DLKK+MD PD + R+IK+FLYQ++ G+ +CHS
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSM--RVIKSFLYQLINGVNFCHS 150
Query: 121 HRVLHRDLKPQNLLID----RRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
R LHRDLKPQNLL+ T LK+ DFGLARAFGIP+R FTHE
Sbjct: 151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE------------- 197
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
++TLWYR PEILLGSRHYST VD+WS+ CI+AEM+ + PLFPGD
Sbjct: 198 ----------------IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVV-RNLEPAGIDLLSK 295
SEID+LFKIF VLG P++ TWPGVT+LPD+K +FPK+ K L V+ L+ G+DLL+
Sbjct: 242 SEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTA 301
Query: 296 MLCMDPSRRITARSALEHEYFRDVEFVP 323
ML MDP +RI+A++ALEH YF +F P
Sbjct: 302 MLEMDPVKRISAKNALEHPYFSHNDFDP 329
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 345 bits (886), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/321 (54%), Positives = 226/321 (70%), Gaps = 33/321 (10%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M++Y+K+EK+GEGTYGVVYKA++ +ALK+IRL+ EDEG+PSTAIREISLLKE+ H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV L DV+HSE+ L LVFE+++ DLKK +D D + IK +LYQ+LRG+A+CH
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ-IKIYLYQLLRGVAHCHQ 137
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HR+LHRDLKPQNLLI+ ALKLADFGLARAFGIPVR++THE
Sbjct: 138 HRILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHE----------------- 179
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAP++L+GS+ YST VD+WS+GCIFAEM+ +PLFPG ++ D
Sbjct: 180 ------------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
+L KIF +LGTPN WP V LP +K F + K +++ GIDLLS MLC
Sbjct: 228 QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCF 287
Query: 300 DPSRRITARSALEHEYFRDVE 320
DP++RI+AR A+ H YF+D++
Sbjct: 288 DPNKRISARDAMNHPYFKDLD 308
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/321 (54%), Positives = 226/321 (70%), Gaps = 33/321 (10%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M++Y+K+EK+GEGTYGVVYKA++ +ALK+IRL+ EDEG+PSTAIREISLLKE+ H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV L DV+HSE+ L LVFE+++ DLKK +D D + IK +LYQ+LRG+A+CH
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ-IKIYLYQLLRGVAHCHQ 137
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
HR+LHRDLKPQNLLI+ ALKLADFGLARAFGIPVR++THE
Sbjct: 138 HRILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHE----------------- 179
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYRAP++L+GS+ YST VD+WS+GCIFAEM+ +PLFPG ++ D
Sbjct: 180 ------------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
+L KIF +LGTPN WP V LP +K F + K +++ GIDLLS MLC
Sbjct: 228 QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCF 287
Query: 300 DPSRRITARSALEHEYFRDVE 320
DP++RI+AR A+ H YF+D++
Sbjct: 288 DPNKRISARDAMNHPYFKDLD 308
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 340 bits (872), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 175/325 (53%), Positives = 227/325 (69%), Gaps = 36/325 (11%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M +YEK+EKIGEGTYG V+KA+N T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC + DP ++K+FL+Q+L+G+ +CHS
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
VLHRDLKPQNLLI+ R LKLADFGLARAFGIPVR ++ E
Sbjct: 120 RNVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAE----------------- 161
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN-QRPLFPGDSEI 239
VVTLWYR P++L G++ YST +D+WS GCIFAE+ N RPLFPG+
Sbjct: 162 ------------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVD 209
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP-SKELGTVVRNLEPAGIDLLSKMLC 298
D+L +IFR+LGTP E+ WP +T LPD+K +P +P + L VV L G DLL +L
Sbjct: 210 DQLKRIFRLLGTPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLK 268
Query: 299 MDPSRRITARSALEHEYFRDVEFVP 323
+P +RI+A AL+H YF D F P
Sbjct: 269 CNPVQRISAEEALQHPYFSD--FCP 291
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 227/325 (69%), Gaps = 36/325 (11%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M +YEK+EKIGEGTYG V+KA+N T+E +ALK++RL+ +DEGVPS+A+REI LLKE++H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC + DP ++K+FL+Q+L+G+ +CHS
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
VLHRDLKPQNLLI+ R LKLA+FGLARAFGIPVR ++ E
Sbjct: 120 RNVLHRDLKPQNLLIN-RNGELKLANFGLARAFGIPVRCYSAE----------------- 161
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPGDSEI 239
VVTLWYR P++L G++ YST +D+WS GCIFAE+ N RPLFPG+
Sbjct: 162 ------------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP-SKELGTVVRNLEPAGIDLLSKMLC 298
D+L +IFR+LGTP E+ WP +T LPD+K +P +P + L VV L G DLL +L
Sbjct: 210 DQLKRIFRLLGTPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLK 268
Query: 299 MDPSRRITARSALEHEYFRDVEFVP 323
+P +RI+A AL+H YF D F P
Sbjct: 269 CNPVQRISAEEALQHPYFSD--FCP 291
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 310 bits (795), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 159/317 (50%), Positives = 213/317 (67%), Gaps = 33/317 (10%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M+ Y K++K+GEGTY VYK ++ +T+ +ALK+IRLE E EG P TAIRE+SLLK+++H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKH 59
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIV L D++H+EK L LVFEYLD DLK+++D C + N +K FL+Q+LRG+AYCH
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHN-VKLFLFQLLRGLAYCHR 118
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
+VLHRDLKPQNLLI+ R LKLADFGLARA IP +T+ +E
Sbjct: 119 QKVLHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYDNE----------------- 160
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
VVTLWYR P+ILLGS YST +D+W VGCIF EM RPLFPG + +
Sbjct: 161 ------------VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
+L IFR+LGTP E+TWPG+ S +FK+ +PK+ ++ L + L+ G DLL+K+L
Sbjct: 209 QLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQF 268
Query: 300 DPSRRITARSALEHEYF 316
+ RI+A A++H +F
Sbjct: 269 EGRNRISAEDAMKHPFF 285
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 303 bits (777), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 156/326 (47%), Positives = 215/326 (65%), Gaps = 42/326 (12%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
Q++++EK+G GTY VYK N T +ALK+++L+ E EG PSTAIREISL+KE++H N
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHEN 64
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAY 117
IVRL DV+H+E KL LVFE++D DLKK+MDS N PR L+K F +Q+L+G+A+
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSR-TVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CH +++LHRDLKPQNLLI++R LKL DFGLARAFGIPV TF+ E
Sbjct: 124 CHENKILHRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSE-------------- 168
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
VVTLWYRAP++L+GSR YST +D+WS GCI AEM+ +PLFPG +
Sbjct: 169 ---------------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVR-----NLEPAGIDL 292
+ ++L IF ++GTPNE WP VT LP + + P ++L V++ L+ +D
Sbjct: 214 DEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDF 273
Query: 293 LSKMLCMDPSRRITARSALEHEYFRD 318
L +L ++P R++A+ AL H +F +
Sbjct: 274 LHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 202/327 (61%), Gaps = 43/327 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTN-ETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-- 59
QYE V +IGEG YG V+KAR+ +ALK++R++ +EG+P + IRE+++L+ ++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 60 -HGNIVRLQDV-----VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H N+VRL DV E KL LVFE++D DL ++D P+ IK ++Q+LR
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ + HSHRV+HRDLKPQN+L+ + +KLADFGLAR +
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILV-TSSGQIKLADFGLARIYS------------------- 171
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+++ S+ VVTLWYRAPE+LL S Y+TPVD+WSVGCIFAEM ++PLF
Sbjct: 172 -----FQMALTSV------VVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLF 219
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
G S++D+L KI V+G P E+ WP +LP + AF ++ + V +++ G DLL
Sbjct: 220 RGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDELGKDLL 277
Query: 294 SKMLCMDPSRRITARSALEHEYFRDVE 320
K L +P++RI+A SAL H YF+D+E
Sbjct: 278 LKCLTFNPAKRISAYSALSHPYFQDLE 304
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 202/327 (61%), Gaps = 43/327 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTN-ETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-- 59
QYE V +IGEG YG V+KAR+ +ALK++R++ +EG+P + IRE+++L+ ++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 60 -HGNIVRLQDV-----VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H N+VRL DV E KL LVFE++D DL ++D P+ IK ++Q+LR
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ + HSHRV+HRDLKPQN+L+ + +KLADFGLAR +
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYS------------------- 171
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+++ S+ VVTLWYRAPE+LL S Y+TPVD+WSVGCIFAEM ++PLF
Sbjct: 172 -----FQMALTSV------VVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLF 219
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
G S++D+L KI V+G P E+ WP +LP + AF ++ + V +++ G DLL
Sbjct: 220 RGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDELGKDLL 277
Query: 294 SKMLCMDPSRRITARSALEHEYFRDVE 320
K L +P++RI+A SAL H YF+D+E
Sbjct: 278 LKCLTFNPAKRISAYSALSHPYFQDLE 304
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/324 (42%), Positives = 199/324 (61%), Gaps = 43/324 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTN-ETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-- 59
QYE V +IGEG YG V+KAR+ +ALK++R++ +EG+P + IRE+++L+ ++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 60 -HGNIVRLQDV-----VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H N+VRL DV E KL LVFE++D DL ++D P+ IK ++Q+LR
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ + HSHRV+HRDLKPQN+L+ + +KLADFGLAR +
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYS------------------- 171
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+++ S+ VVTLWYRAPE+LL S Y+TPVD+WSVGCIFAEM ++PLF
Sbjct: 172 -----FQMALTSV------VVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLF 219
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
G S++D+L KI V+G P E+ WP +LP + AF ++ + V +++ G DLL
Sbjct: 220 RGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDELGKDLL 277
Query: 294 SKMLCMDPSRRITARSALEHEYFR 317
K L +P++RI+A SAL H YF+
Sbjct: 278 LKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 193/329 (58%), Gaps = 42/329 (12%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ--- 59
+YE V +IG G YG VYKAR+ + +ALK +R+ +EG+P + +RE++LL+ ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 60 HGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
H N+VRL DV + E K+ LVFE++D DL+ ++D P IK + Q LRG
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ + H++ ++HRDLKP+N+L+ +KLADFGLAR + + F
Sbjct: 125 LDFLHANCIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALFP------------- 170
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
VVTLWYRAPE+LL S Y+TPVD+WSVGCIFAEM ++PLF
Sbjct: 171 -----------------VVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFC 212
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
G+SE D+L KIF ++G P ED WP SLP + AFP + + +VV +E +G LL
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLL 270
Query: 295 KMLCMDPSRRITARSALEHEYFRDVEFVP 323
+ML +P +RI+A AL+H Y E P
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 195/329 (59%), Gaps = 42/329 (12%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ--- 59
+YE V +IG G YG VYKAR+ + +ALK +R+ +EG+P + +RE++LL+ ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 60 HGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
H N+VRL DV + E K+ LVFE++D DL+ ++D P IK + Q LRG
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ + H++ ++HRDLKP+N+L+ +KLADFGLAR +
Sbjct: 125 LDFLHANCIVHRDLKPENILVTS-GGTVKLADFGLARIYS-------------------- 163
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
Y++ + VVTLWYRAPE+LL S Y+TPVD+WSVGCIFAEM ++PLF
Sbjct: 164 ----YQMALAPV------VVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFC 212
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
G+SE D+L KIF ++G P ED WP SLP + AFP + + +VV +E +G LL
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLL 270
Query: 295 KMLCMDPSRRITARSALEHEYFRDVEFVP 323
+ML +P +RI+A AL+H Y E P
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 195/329 (59%), Gaps = 42/329 (12%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ--- 59
+YE V +IG G YG VYKAR+ + +ALK +R+ +EG+P + +RE++LL+ ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 60 HGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
H N+VRL DV + E K+ LVFE++D DL+ ++D P IK + Q LRG
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ + H++ ++HRDLKP+N+L+ +KLADFGLAR +
Sbjct: 125 LDFLHANCIVHRDLKPENILVTS-GGTVKLADFGLARIYS-------------------- 163
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
Y++ + VVTLWYRAPE+LL S Y+TPVD+WSVGCIFAEM ++PLF
Sbjct: 164 ----YQMALDPV------VVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFC 212
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
G+SE D+L KIF ++G P ED WP SLP + AFP + + +VV +E +G LL
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLL 270
Query: 295 KMLCMDPSRRITARSALEHEYFRDVEFVP 323
+ML +P +RI+A AL+H Y E P
Sbjct: 271 EMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 238 bits (606), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 184/319 (57%), Gaps = 35/319 (10%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDE---GVPSTAIREISLLKEMQ 59
+YEK++ +GEG + VYKAR+ TN+ +A+KKI+L E G+ TA+REI LL+E+
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
H NI+ L D + + LVF++++ DL+ + P IK ++ L+G+ Y H
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
H +LHRDLKP NLL+D LKLADFGLA++FG P R + H+
Sbjct: 130 QHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYXHQ---------------- 172
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
VVT WYRAPE+L G+R Y VD+W+VGCI AE++ + P PGDS++
Sbjct: 173 -------------VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+L +IF LGTP E+ WP + SLPD+ + F +P L + +DL+ +
Sbjct: 220 DQLTRIFETLGTPTEEQWPDMCSLPDYVT-FKSFPGIPLHHIFSAAGDDLLDLIQGLFLF 278
Query: 300 DPSRRITARSALEHEYFRD 318
+P RITA AL+ +YF +
Sbjct: 279 NPCARITATQALKMKYFSN 297
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 227 bits (578), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 193/332 (58%), Gaps = 45/332 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEG---VPSTAIREISLLKEMQ 59
+YE V +IG G YG VYKAR+ + +ALK +R+ G +P + +RE++LL+ ++
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 60 ---HGNIVRLQDVVHS-----EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQI 111
H N+VRL DV + E K+ LVFE++D DL+ ++D P IK + Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
LRG+ + H++ ++HRDLKP+N+L+ +KLADFGLAR +
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTS-GGTVKLADFGLARIYS----------------- 171
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y++ + VVTLWYRAPE+LL S Y+TPVD+WSVGCIFAEM ++P
Sbjct: 172 -------YQMALTPV------VVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKP 217
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
LF G+SE D+L KIF ++G P ED WP SLP + AFP + + +VV +E +G
Sbjct: 218 LFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQ 275
Query: 292 LLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
LL +ML +P +RI+A AL+H Y E P
Sbjct: 276 LLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 204 bits (518), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 177/328 (53%), Gaps = 51/328 (15%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M++YE + +GEG+YG+V K RN T +A+KK +D+ V A+REI LLK+++H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
N+V L +V +K+ YLVFE++D + ++ P+ D ++++ +L+QI+ GI +CHS
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHS 142
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
H ++HRD+KP+N+L+ ++ +KL DFG AR P + E
Sbjct: 143 HNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDE----------------- 184
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
V T WYRAPE+L+G Y VDVW++GC+ EM PLFPGDS+ID
Sbjct: 185 ------------VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232
Query: 241 ELFKIFRVLGTP--------NEDTWPGVTSLPDFKSAFP---KWPSKELGTVVRNLEPAG 289
+L+ I LG N++ LP+ K P ++P +L VV
Sbjct: 233 QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYP--KLSEVV------- 283
Query: 290 IDLLSKMLCMDPSRRITARSALEHEYFR 317
IDL K L +DP +R L H++F+
Sbjct: 284 IDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 181/332 (54%), Gaps = 55/332 (16%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M++YEK+ KIGEG+YGVV+K RN T + +A+KK ++D + A+REI +LK+++H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
N+V L +V +++L+LVFEY D +L ++ P+ L+K+ +Q L+ +
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE-----HLVKSITWQTLQAVN 116
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
+CH H +HRD+KP+N+LI + + +KL DFG AR TG S Y+
Sbjct: 117 FCHKHNCIHRDVKPENILITKHS-VIKLCDFGFARLL--------------TGPSDYYDD 161
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
+V T WYR+PE+L+G Y PVDVW++GC+FAE+++ PL+PG
Sbjct: 162 ---------------EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206
Query: 237 SEIDELFKIFRVLGT---------PNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
S++D+L+ I + LG + GV +PD + P L N+
Sbjct: 207 SDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV-KIPDPEDMEP------LELKFPNISY 259
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
+ LL L MDP+ R+T L H YF ++
Sbjct: 260 PALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 181/330 (54%), Gaps = 44/330 (13%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +YEK+ KIG+GT+G V+KAR+ T + +ALKK+ +E E EG P TA+REI +L+ ++H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 61 GNIVRLQDVVHSEK--------KLYLVFEYLDLDLKKHMDSC-PDFANDPRLIKTFLYQI 111
N+V L ++ ++ +YLVF++ + DL + + F IK + +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 133
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L G+ Y H +++LHRD+K N+LI R LKLADFGLARAF + + + +
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXN----- 187
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+VVTLWYR PE+LLG R Y P+D+W GCI AEM + P
Sbjct: 188 --------------------RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 227
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFK-----SAFPKWPSKELGTVVRNLE 286
+ G++E +L I ++ G+ + WP V + ++ + L VR +
Sbjct: 228 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVR--D 285
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
P +DL+ K+L +DP++RI + AL H++F
Sbjct: 286 PYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 181/330 (54%), Gaps = 44/330 (13%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +YEK+ KIG+GT+G V+KAR+ T + +ALKK+ +E E EG P TA+REI +L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 61 GNIVRLQDVVHS--------EKKLYLVFEYLDLDLKKHMDSC-PDFANDPRLIKTFLYQI 111
N+V L ++ + + +YLVF++ + DL + + F IK + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L G+ Y H +++LHRD+K N+LI R LKLADFGLARAF + + + +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXN----- 188
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+VVTLWYR PE+LLG R Y P+D+W GCI AEM + P
Sbjct: 189 --------------------RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFK-----SAFPKWPSKELGTVVRNLE 286
+ G++E +L I ++ G+ + WP V + ++ + L VR +
Sbjct: 229 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVR--D 286
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
P +DL+ K+L +DP++RI + AL H++F
Sbjct: 287 PYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 181/330 (54%), Gaps = 44/330 (13%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +YEK+ KIG+GT+G V+KAR+ T + +ALKK+ +E E EG P TA+REI +L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 61 GNIVRLQDVVHSEK--------KLYLVFEYLDLDLKKHMDSC-PDFANDPRLIKTFLYQI 111
N+V L ++ ++ +YLVF++ + DL + + F IK + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L G+ Y H +++LHRD+K N+LI R LKLADFGLARAF + + + +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXN----- 188
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+VVTLWYR PE+LLG R Y P+D+W GCI AEM + P
Sbjct: 189 --------------------RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFK-----SAFPKWPSKELGTVVRNLE 286
+ G++E +L I ++ G+ + WP V + ++ + L VR +
Sbjct: 229 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVR--D 286
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
P +DL+ K+L +DP++RI + AL H++F
Sbjct: 287 PYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 181/330 (54%), Gaps = 44/330 (13%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +YEK+ KIG+GT+G V+KAR+ T + +ALKK+ +E E EG P TA+REI +L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 61 GNIVRLQDVVHSEK--------KLYLVFEYLDLDLKKHMDSC-PDFANDPRLIKTFLYQI 111
N+V L ++ ++ +YLVF++ + DL + + F IK + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L G+ Y H +++LHRD+K N+LI R LKLADFGLARAF + + + +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXN----- 188
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+VVTLWYR PE+LLG R Y P+D+W GCI AEM + P
Sbjct: 189 --------------------RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFK-----SAFPKWPSKELGTVVRNLE 286
+ G++E +L I ++ G+ + WP V + ++ + L VR +
Sbjct: 229 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVR--D 286
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
P +DL+ K+L +DP++RI + AL H++F
Sbjct: 287 PYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + C +ND I FLYQILRG+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KCQHLSNDH--ICYFLYQILRGLKY 143
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 144 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 186
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 187 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 296
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 187 bits (474), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 175/321 (54%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y +++ IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLRFRHEN 102
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
++ ++D++ + + +Y+V + ++ DL K + S +ND I FLYQILRG+ Y
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-QQLSNDH--ICYFLYQILRGLKY 159
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLLI+ T LK+ DFGLAR + H+H G FL
Sbjct: 160 IHSANVLHRDLKPSNLLINT-TCDLKICDFGLAR-----IADPEHDHTG---------FL 204
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 205 TE------------XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + ++ ++ + P + + +DLL +
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDR 312
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P++RIT AL H Y
Sbjct: 313 MLTFNPNKRITVEEALAHPYL 333
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 139
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 140 IHSANVLHRDLKPSNLLLNT-TXDLKICDFGLAR-----VADPDHDHTG----------- 182
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 183 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 233 YLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 292
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 293 MLTFNPHKRIEVEQALAHPYL 313
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 171/323 (52%), Gaps = 42/323 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 139
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 140 IHSANVLHRDLKPSNLLLNT-TXDLKICDFGLAR-----VADPDHDHTG----------- 182
Query: 178 RYRVLAGSLILQFLK--VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
FL V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 183 ------------FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
+D+L I +LG+P+++ + +L ++ + P + N + +DLL
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 290
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +P +RI AL H Y
Sbjct: 291 DKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 139
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 140 IHSANVLHRDLKPSNLLLNT-TXDLKIXDFGLAR-----VADPDHDHTG----------- 182
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 183 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 233 YLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 292
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 293 MLTFNPHKRIEVEQALAHPYL 313
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 171/323 (52%), Gaps = 42/323 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 139
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 140 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 182
Query: 178 RYRVLAGSLILQFLK--VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
FL V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 183 ------------FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
+D+L I +LG+P+++ + +L ++ + P + N + +DLL
Sbjct: 231 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 290
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +P +RI AL H Y
Sbjct: 291 DKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 171/323 (52%), Gaps = 42/323 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLAFRHEN 84
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 141
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 142 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 184
Query: 178 RYRVLAGSLILQFLK--VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
FL V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 185 ------------FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
+D+L I +LG+P+++ + +L ++ + P + N + +DLL
Sbjct: 233 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 292
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +P +RI AL H Y
Sbjct: 293 DKMLTFNPHKRIEVEQALAHPYL 315
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 102
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +YLV + DL K + + +ND I FLYQILRG+ Y
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 159
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 160 IHSANVLHRDLKPSNLLLNT-TXDLKICDFGLAR-----VADPDHDHTG----------- 202
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 203 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 312
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 313 MLTFNPHKRIEVEQALAHPYL 333
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 84
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 141
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 142 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 184
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 185 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 235 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 294
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 295 MLTFNPHKRIEVEQALAHPYL 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 102
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 159
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 160 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 202
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 203 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 312
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 313 MLTFNPHKRIEVEQALAHPYL 333
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 170/317 (53%), Gaps = 34/317 (10%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPST-AIREISLLKEMQHGNIVRL-- 66
+GEG YGVV A + T E +A+KKI E D+ + + +REI +LK +H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 67 ---QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
D + ++Y++ E + DL + + S ++D I+ F+YQ LR + H V
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDD--HIQYFIYQTLRAVKVLHGSNV 133
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDLKP NLLI+ + LK+ DFGLAR + +G++ Y
Sbjct: 134 IHRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEY---------- 182
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
V T WYRAPE++L S YS +DVWS GCI AE+ +RP+FPG +L
Sbjct: 183 ---------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 244 KIFRVLGTPNEDTWPGVTSLP---DFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
IF ++GTP+ D P ++ + P +P+ L + + P GIDLL +ML D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 301 PSRRITARSALEHEYFR 317
P++RITA+ ALEH Y +
Sbjct: 294 PAKRITAKEALEHPYLQ 310
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 90
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 147
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 148 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 190
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 191 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 241 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 300
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 301 MLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 139
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 140 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 182
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 183 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 233 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 292
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 293 MLTFNPHKRIEVEQALAHPYL 313
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYXQRTLREIKILLRFRHEN 86
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 143
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 144 IHSANVLHRDLKPSNLLLNT-TXDLKICDFGLAR-----VADPDHDHTG----------- 186
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 187 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 296
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 184 bits (467), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + V +A+KKI E + +REI +L +H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLAFRHEN 84
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 141
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T+ LK+ DFGLAR V H+H G
Sbjct: 142 IHSANVLHRDLKPSNLLLNT-TSDLKICDFGLAR-----VADPDHDHTG----------- 184
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 185 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 238 EIDELFKIFRVLGTPN-EDTWPGVT-SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+ ED G+ ++ + P + N + +DLL K
Sbjct: 235 YLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 294
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 295 MLTFNPHKRIEVEQALAHPYL 315
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 143
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 144 IHSANVLHRDLKPSNLLLNT-TXDLKICDFGLAR-----VADPDHDHTG----------- 186
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 187 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 296
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 184 bits (466), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 171/323 (52%), Gaps = 42/323 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 80
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 137
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 138 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 180
Query: 178 RYRVLAGSLILQFLK--VVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
FL V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 181 ------------FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
+D+L I +LG+P+++ + +L ++ + P + N + +DLL
Sbjct: 229 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLL 288
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +P +RI AL H Y
Sbjct: 289 DKMLTFNPHKRIEVEQALAHPYL 311
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 184 bits (466), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 171/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 143
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G FL
Sbjct: 144 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG---------FL 188
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 189 XE------------XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 296
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 184 bits (466), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 171/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 87
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 144
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G FL
Sbjct: 145 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG---------FL 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 190 XE------------XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 238 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 297
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 298 MLTFNPHKRIEVEQALAHPYL 318
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 183 bits (465), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 87
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 144
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 145 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 187
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 188 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 238 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 297
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 298 MLTFNPHKRIEVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 183 bits (465), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 88
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 145
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 146 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 188
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 189 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 239 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 298
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 299 MLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 183 bits (465), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 79
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 136
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 137 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 179
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 180 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 230 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 289
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 290 MLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 183 bits (465), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 143
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 144 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 186
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 187 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 296
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 171/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A+KKI E + +REI +L +H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 80
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 137
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 138 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 180
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 181 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P ++ + +L ++ + P + N + +DLL K
Sbjct: 231 YLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 290
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 291 MLTFNPHKRIEVEQALAHPYL 311
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + IGEG YG+V A + + +A++KI E + +REI +L +H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 63 IVRLQDVVHSE-----KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
I+ + D++ + K +Y+V + ++ DL K + + +ND I FLYQILRG+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDH--ICYFLYQILRGLKY 143
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS VLHRDLKP NLL++ T LK+ DFGLAR V H+H G
Sbjct: 144 IHSANVLHRDLKPSNLLLNT-TCDLKICDFGLAR-----VADPDHDHTG----------- 186
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+ ++ V T WYRAPEI+L S+ Y+ +D+WSVGCI AEM++ RP+FPG
Sbjct: 187 --------FLTEY--VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L I +LG+P+++ + +L ++ + P + N + +DLL K
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 296
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +P +RI AL H Y
Sbjct: 297 MLTFNPHKRIEVEQALAHPYL 317
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 174/317 (54%), Gaps = 34/317 (10%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPST-AIREISLLKEMQHGNIVRL-- 66
+GEG YGVV A + T E +A+KKI E D+ + + +REI +LK +H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 67 ---QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
D + ++Y++ E + DL + + S ++D I+ F+YQ LR + H V
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDD--HIQYFIYQTLRAVKVLHGSNV 133
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDLKP NLLI+ + LK+ DFGLAR + ++ TG
Sbjct: 134 IHRDLKPSNLLINSNCD-LKVCDFGLARI----IDESAADNSEPTG-------------Q 175
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
S +++F V T WYRAPE++L S YS +DVWS GCI AE+ +RP+FPG +L
Sbjct: 176 QSGMVEF--VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 244 KIFRVLGTPNEDTWPGVTSLP---DFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
IF ++GTP+ D P ++ + P +P+ L + + P GIDLL +ML D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 301 PSRRITARSALEHEYFR 317
P++RITA+ ALEH Y +
Sbjct: 294 PAKRITAKEALEHPYLQ 310
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 169/317 (53%), Gaps = 34/317 (10%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPST-AIREISLLKEMQHGNIVRL-- 66
+GEG YGVV A + T E +A+KKI E D+ + + +REI +LK +H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 67 ---QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
D + ++Y++ E + DL + + S ++D I+ F+YQ LR + H V
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDD--HIQYFIYQTLRAVKVLHGSNV 133
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDLKP NLLI+ + LK+ DFGLAR + +G++
Sbjct: 134 IHRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMT------------ 180
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
V T WYRAPE++L S YS +DVWS GCI AE+ +RP+FPG +L
Sbjct: 181 -------EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 244 KIFRVLGTPNEDTWPGVTSLP---DFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
IF ++GTP+ D P ++ + P +P+ L + + P GIDLL +ML D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 301 PSRRITARSALEHEYFR 317
P++RITA+ ALEH Y +
Sbjct: 294 PAKRITAKEALEHPYLQ 310
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 160/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L + HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCAKLTDDH--VQFLIYQILRGL 134
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 178
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 179 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 222 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 281
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 282 EKMLVLDSDKRITAAQALAHAYF 304
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 134
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 178
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 179 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 222 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 281
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 282 EKMLVLDSDKRITAAQALAHAYF 304
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 160/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 144
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ + LK+ DFGLAR H TG
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLAR----------HTDDEMTGY----- 188
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 189 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 232 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 291
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 292 EKMLVLDSDKRITAAQALAHAYF 314
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 157
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 201
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 202 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 245 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 304
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 305 EKMLVLDSDKRITAAQALAHAYF 327
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 134
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR + F
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMAGF--------------- 178
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 179 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 222 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 281
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 282 EKMLVLDSDKRITAAQALAHAYF 304
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 180 bits (457), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR + F
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMAGF--------------- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL + C +D ++ +YQILRG+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN-IVKCQKLTDDH--VQFLIYQILRGL 144
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 188
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 189 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 232 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 291
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 292 EKMLVLDSDKRITAAQALAHAYF 314
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 148
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 149 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 192
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 193 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 235
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 236 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 295
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 296 EKMLVLDSDKRITAAQALAHAYF 318
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 170/323 (52%), Gaps = 36/323 (11%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D+YE +E IG G YGVV AR +T + +A+KKI + +RE+ +LK +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 62 NIVRLQDVVHSE------KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI+ ++D++ K +Y+V + ++ DL + + S + ++ FLYQ+LRG+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE--HVRYFLYQLLRGL 171
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS +V+HRDLKP NLL++ LK+ DFG+AR G+ H+++ +
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCE-LKIGDFGMAR--GLCTSPAEHQYFMTE------- 221
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPE++L Y+ +D+WSVGCIF EM+ +R LFPG
Sbjct: 222 ----------------YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
+ + +L I VLGTP+ V + + + + P TV + + LL
Sbjct: 266 KNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLL 325
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
+ML +PS RI+A +AL H +
Sbjct: 326 GRMLRFEPSARISAAAALRHPFL 348
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 158
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 202
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 203 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 246 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 305
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 306 EKMLVLDSDKRITAAQALAHAYF 328
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 160/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 140
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ + LK+ DFGLAR H TG
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLAR----------HTDDEMTGY----- 184
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 185 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 228 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 287
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 288 EKMLVLDSDKRITAAQALAHAYF 310
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 180 bits (457), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR + F
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMAGF--------------- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + IG G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 143
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLAR----------HTDDEMTGY----- 187
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 188 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 231 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 290
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 291 EKMLVLDSDKRITAAQALAHAYF 313
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 135
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 179
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 180 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 223 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 282
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 283 EKMLVLDSDKRITAAQALAHAYF 305
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 136
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 137 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 180
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 181 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 223
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 224 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 283
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 284 EKMLVLDSDKRITAAQALAHAYF 306
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTG------ 181
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 182 ----------------XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 144
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 188
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 189 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 232 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 291
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 292 EKMLVLDSDKRITAAQALAHAYF 314
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 134
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 178
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 179 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 222 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 281
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 282 EKMLVLDSDKRITAAQALAHAYF 304
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 145
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTADEMTGY----- 189
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 190 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 292
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 293 EKMLVLDSDKRITAAQALAHAYF 315
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 150
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 194
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 195 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 238 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 297
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 298 EKMLVLDSDKRITAAQALAHAYF 320
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 143
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 187
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 188 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 231 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 290
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 291 EKMLVLDSDKRITAAQALAHAYF 313
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 170/323 (52%), Gaps = 36/323 (11%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D+YE +E IG G YGVV AR +T + +A+KKI + +RE+ +LK +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 62 NIVRLQDVVHSE------KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI+ ++D++ K +Y+V + ++ DL + + S + ++ FLYQ+LRG+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE--HVRYFLYQLLRGL 172
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS +V+HRDLKP NLL++ LK+ DFG+AR G+ H+++ +
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCE-LKIGDFGMAR--GLCTSPAEHQYFMTE------- 222
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPE++L Y+ +D+WSVGCIF EM+ +R LFPG
Sbjct: 223 ----------------YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 266
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
+ + +L I VLGTP+ V + + + + P TV + + LL
Sbjct: 267 KNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLL 326
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
+ML +PS RI+A +AL H +
Sbjct: 327 GRMLRFEPSARISAAAALRHPFL 349
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 145
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTADEMTGY----- 189
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 190 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 292
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 293 EKMLVLDSDKRITAAQALAHAYF 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 135
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 179
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 180 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 223 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 282
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 283 EKMLVLDSDKRITAAQALAHAYF 305
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 150
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 194
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 195 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 238 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 297
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 298 EKMLVLDSDKRITAAQALAHAYF 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 150
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 194
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 195 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 238 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 297
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 298 EKMLVLDSDKRITAAQALAHAYF 320
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 149
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLAR----------HTDDEMTGY----- 193
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 194 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 237 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 296
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 297 EKMLVLDSDKRITAAQALAHAYF 319
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 145
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTADEMTGY----- 189
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 190 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 292
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 293 EKMLVLDSDKRITAAQALAHAYF 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 145
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 189
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 190 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 292
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 293 EKMLVLDSDKRITAAQALAHAYF 315
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 144
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 188
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 189 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 232 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 291
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 292 EKMLVLDSDKRITAAQALAHAYF 314
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 161
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 205
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 206 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 249 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 308
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 309 EKMLVLDSDKRITAAQALAHAYF 331
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 158
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 202
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 203 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 246 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 305
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 306 EKMLVLDSDKRITAAQALAHAYF 328
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 149
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 193
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 194 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 237 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 296
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 297 EKMLVLDSDKRITAAQALAHAYF 319
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 143
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLAR----------HTDDEMTGY----- 187
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 188 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 231 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 290
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 291 EKMLVLDSDKRITAAQALAHAYF 313
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 157
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 201
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 202 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 245 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 304
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 305 EKMLVLDSDKRITAAQALAHAYF 327
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 140
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 184
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 185 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 228 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 287
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 288 EKMLVLDSDKRITAAQALAHAYF 310
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 143
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 187
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 188 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 231 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 290
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 291 EKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 137
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 138 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 181
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 182 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 224
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 225 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 284
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 285 EKMLVLDSDKRITAAQALAHAYF 307
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 140
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 184
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 185 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 228 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 287
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 288 EKMLVLDSDKRITAAQALAHAYF 310
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 140
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 184
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 185 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 228 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 287
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 288 EKMLVLDSDKRITAAQALAHAYF 310
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 158
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H G
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMXG------ 201
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 202 ----------------XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 246 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLL 305
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 306 EKMLVLDSDKRITAAQALAHAYF 328
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 161
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR + +
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLARHTDDEMXGY--------------- 205
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 206 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 249 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 308
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 309 EKMLVLDSDKRITAAQALAHAYF 331
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 159/323 (49%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ D+GLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDYGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 177 bits (448), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DF LAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFYLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 161/326 (49%), Gaps = 50/326 (15%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V + + + IA+KK+ + RE+ LLK M+H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 167
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 168 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 211
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 212 -----------------VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG 254
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP-----DFKSAFPKWPSKELGTVVRNLEPAGI 290
I++L +I R+ GTP ++ +P ++ ++ P+ P + V P +
Sbjct: 255 TDHINQLQQIMRLTGTPPASV---ISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAV 311
Query: 291 DLLSKMLCMDPSRRITARSALEHEYF 316
DLL KML +D +RITA AL H YF
Sbjct: 312 DLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ FGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILGFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ D GLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDAGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ D GLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDRGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ C +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ D GLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDGGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLP--DFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKXQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDXE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL + S +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS-QKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ + LK+ DFGL R H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDSE-LKILDFGLCR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 158/323 (48%), Gaps = 44/323 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ + +G G YG V A + T +A+KK+ + RE+ LLK M+H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 62 NIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
N++ L DV + L YLV + DL ++ +D ++ +YQILRG+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKXQKLTDDH--VQFLIYQILRGL 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS ++HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCE-LKILDFGLAR----------HTDDEMTGY----- 182
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
V T WYRAPEI+L HY+ VD+WSVGCI AE++ R LFPG
Sbjct: 183 -----------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVT--SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
ID+L I R++GTP + ++ S ++ + + P V P +DLL
Sbjct: 226 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 285
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
KML +D +RITA AL H YF
Sbjct: 286 EKMLVLDSDKRITAAQALAHAYF 308
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 181/340 (53%), Gaps = 62/340 (18%)
Query: 9 KIGEGTYGVVYKARNCVTNETI--ALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
K+G GTYG VYKA+ + ALK+I E G+ +A REI+LL+E++H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLRELKHPNVISL 83
Query: 67 QDVV--HSEKKLYLVFEYLDLDL----KKHMDSCPDF--ANDPR-LIKTFLYQILRGIAY 117
Q V H+++K++L+F+Y + DL K H S + PR ++K+ LYQIL GI Y
Sbjct: 84 QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 118 CHSHRVLHRDLKPQNLLI---DRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
H++ VLHRDLKP N+L+ +K+AD G AR F P++
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD------------ 191
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
L + VVT WYRAPE+LLG+RHY+ +D+W++GCIFAE++ P+F
Sbjct: 192 -------------LDPV-VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
Query: 235 GDSEI---------DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELG--TVVR 283
E D+L +IF V+G P + W + +P+ + + ++++
Sbjct: 238 CRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIK 297
Query: 284 NLEPAGID-------LLSKMLCMDPSRRITARSALEHEYF 316
+E + LL K+L MDP +RIT+ A++ YF
Sbjct: 298 YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 162/325 (49%), Gaps = 54/325 (16%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
+G G YG V A + + E +A+KK+ + E A RE+ LLK MQH N++ L DV
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 70 VHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
L YLV ++ DL+K M +F+ + I+ +YQ+L+G+ Y HS V
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGM--EFSEEK--IQYLVYQMLKGLKYIHSAGV 165
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 166 VHRDLKPGNLAVNEDCE-LKILDFGLAR----------HADAEMTGY------------- 201
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
VVT WYRAPE++L HY+ VD+WSVGCI AEM+ + LF G +D+L
Sbjct: 202 ---------VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 252
Query: 244 KIFRVLGTPNEDTWPGVTSLPD-----FKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+I +V G P + V L D + + P+ P K+ + P DLL KML
Sbjct: 253 QILKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309
Query: 299 MDPSRRITARSALEH---EYFRDVE 320
+D +R+TA AL H E FRD E
Sbjct: 310 LDVDKRLTAAQALTHPFFEPFRDPE 334
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 161/315 (51%), Gaps = 44/315 (13%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
+G G YG V A + + +A+KK+ + RE+ LLK ++H N++ L DV
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 70 ------VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+ ++YLV + DL ++ C +++ ++ +YQ+LRG+ Y HS +
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLN-NIVKCQALSDEH--VQFLVYQLLRGLKYIHSAGI 152
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDLKP N+ ++ + L++ DFGLAR + +
Sbjct: 153 IHRDLKPSNVAVNEDSE-LRILDFGLARQADEEMTGY----------------------- 188
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
V T WYRAPEI+L HY+ VD+WSVGCI AE++ + LFPG ID+L
Sbjct: 189 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
Query: 244 KIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDP 301
+I V+GTP+ + ++S + + P P K+L ++ R P IDLL +ML +D
Sbjct: 240 RIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDS 299
Query: 302 SRRITARSALEHEYF 316
+R++A AL H YF
Sbjct: 300 DQRVSAAEALAHAYF 314
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 160/321 (49%), Gaps = 44/321 (13%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y ++ +G G YG V A + T +A+KK+ + E A RE+ LLK M+H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 64 VRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
+ L DV ++ L YLV ++ DL K M D I+ +YQ+L+G+ Y
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLGED--RIQFLVYQMLKGLRY 143
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
H+ ++HRDLKP NL ++ LK+ DFGLAR E G
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCE-LKILDFGLAR-------QADSEMXGX---------- 185
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
VVT WYRAPE++L Y+ VD+WSVGCI AEM+ + LF G
Sbjct: 186 ---------------VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+D+L +I +V GTP + + S ++ P+ K+ +++ N P ++LL K
Sbjct: 231 HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEK 290
Query: 296 MLCMDPSRRITARSALEHEYF 316
ML +D +R+TA AL H YF
Sbjct: 291 MLVLDAEQRVTAGEALAHPYF 311
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 158/315 (50%), Gaps = 44/315 (13%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
+G G YG V A + + +A+KK+ + RE+ LLK ++H N++ L DV
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 70 ------VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+ ++YLV + DL + S A ++ +YQ+LRG+ Y HS +
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQ---ALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDLKP N+ ++ + L++ DFGLAR + +
Sbjct: 153 IHRDLKPSNVAVNEDSE-LRILDFGLARQADEEMTGY----------------------- 188
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
V T WYRAPEI+L HY+ VD+WSVGCI AE++ + LFPG ID+L
Sbjct: 189 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
Query: 244 KIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDP 301
+I V+GTP+ + ++S + + P P K+L ++ R P IDLL +ML +D
Sbjct: 240 RIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDS 299
Query: 302 SRRITARSALEHEYF 316
+R++A AL H YF
Sbjct: 300 DQRVSAAEALAHAYF 314
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 44/315 (13%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
+G G YG V A + + +A+KK+ + RE+ LLK ++H N++ L DV
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 70 ------VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+ ++YLV + DL ++ C +++ ++ +YQ+LRG+ Y HS +
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLN-NIVKCQALSDEH--VQFLVYQLLRGLKYIHSAGI 144
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDLKP N+ ++ L++ DFGLAR + +
Sbjct: 145 IHRDLKPSNVAVNEDCE-LRILDFGLARQADEEMTGY----------------------- 180
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
V T WYRAPEI+L HY+ VD+WSVGCI AE++ + LFPG ID+L
Sbjct: 181 ---------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 231
Query: 244 KIFRVLGTPNEDTWPGVTS--LPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDP 301
+I V+GTP+ + ++S + + P P K+L ++ R P IDLL +ML +D
Sbjct: 232 RIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDS 291
Query: 302 SRRITARSALEHEYF 316
+R++A AL H YF
Sbjct: 292 DQRVSAAEALAHAYF 306
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 161/325 (49%), Gaps = 54/325 (16%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
+G G YG V A + + E +A+KK+ + E A RE+ LLK MQH N++ L DV
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 70 VHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
L YLV ++ DL+K M F+ + I+ +YQ+L+G+ Y HS V
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGL--KFSEEK--IQYLVYQMLKGLKYIHSAGV 147
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDLKP NL ++ LK+ DFGLAR H TG
Sbjct: 148 VHRDLKPGNLAVNEDCE-LKILDFGLAR----------HADAEMTGY------------- 183
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
VVT WYRAPE++L HY+ VD+WSVGCI AEM+ + LF G +D+L
Sbjct: 184 ---------VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234
Query: 244 KIFRVLGTPNEDTWPGVTSLPD-----FKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+I +V G P + V L D + + P+ P K+ + P DLL KML
Sbjct: 235 QILKVTGVPGTEF---VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291
Query: 299 MDPSRRITARSALEH---EYFRDVE 320
+D +R+TA AL H E FRD E
Sbjct: 292 LDVDKRLTAAQALTHPFFEPFRDPE 316
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 185/336 (55%), Gaps = 37/336 (11%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HG 61
+YE V+K+G+G YG+V+K+ + T E +A+KKI ++ REI +L E+ H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 62 NIVRLQDVVHSE--KKLYLVFEYLDLDLKKHMDSCPDFAN--DPRLIKTFLYQILRGIAY 117
NIV L +V+ ++ + +YLVF+Y++ DL + AN +P + +YQ+++ I Y
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIR-----ANILEPVHKQYVVYQLIKVIKY 124
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS +LHRD+KP N+L++ + +K+ADFGL+R+F + +R T+ I + +
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECH-VKVADFGLSRSF-VNIRRVTN------NIPLSINEN 176
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
IL V T WYRAPEILLGS Y+ +D+WS+GCI E++ +P+FPG S
Sbjct: 177 TENFDDDQPILTDY-VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTS-----------------LPDFKSAFPKWPSKELGT 280
+++L +I V+ P+ + + S + + F KW + L
Sbjct: 236 TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKI 295
Query: 281 VVR-NLEPAGIDLLSKMLCMDPSRRITARSALEHEY 315
+ + +DLL K+L +P++RI+A AL+H +
Sbjct: 296 NPKADCNEEALDLLDKLLQFNPNKRISANDALKHPF 331
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 173/328 (52%), Gaps = 52/328 (15%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ + + RE+ +++++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 64 VRLQDVVHS--EKK----LYLVFEYLDLDL---KKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQ--TLPVIYVKLYMYQLFR 133
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 181
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 182 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVR-NLEPAGID 291
PGDS +D+L +I +VLGTP + + P++ AFP+ + V R P I
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFAFPQIKAHPWTKVFRPRTPPEAIA 281
Query: 292 LLSKMLCMDPSRRITARSALEHEYFRDV 319
L S++L P+ R+T A H +F ++
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 173/328 (52%), Gaps = 52/328 (15%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ + + RE+ +++++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFR 133
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 182
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 183 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTVVR-NLEPAGID 291
PGDS +D+L +I +VLGTP + + P++ AFP+ + V R P I
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFAFPQIKAHPWTKVFRPRTPPEAIA 281
Query: 292 LLSKMLCMDPSRRITARSALEHEYFRDV 319
L S++L P+ R+T A H +F ++
Sbjct: 282 LCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 173/357 (48%), Gaps = 50/357 (14%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE IG G+YG VY A + N+ +A+KK+ ED +REI++L ++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 62 NIVRLQDVVHSEK-----KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
I+RL D++ E +LY+V E D DLKK + P F + +KT LY +L G
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEQH-VKTILYNLLLGEK 145
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG----IPVRTFTHEHWGSTGISI 172
+ H ++HRDLKP N L+++ ++K+ DFGLAR I + E +
Sbjct: 146 FIHESGIIHRDLKPANCLLNQDC-SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-- 230
+ L+ ++ + VVT WYRAPE++L +Y+ +D+WS GCIFAE++N
Sbjct: 205 HNKNLKKQLTS--------HVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
Query: 231 ---------PLFPGD-----------------SEIDELFKIFRVLGTPNEDTWPGVTSLP 264
PLFPG S D+L IF V+GTP E+ +T
Sbjct: 257 HINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQE 316
Query: 265 DFK--SAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
K FP +L ++ GIDLL ML + +RIT AL H Y +DV
Sbjct: 317 VIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDV 373
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 80
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 138
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 187
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 188 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 229 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 283
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 284 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 314
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 133
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 181
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 182 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 278
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 279 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 103
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 161
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 210
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 211 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 252 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 306
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 307 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 337
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 83
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 141
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 189
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 190 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 232 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 286
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 287 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 317
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 167
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 215
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 216 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 258 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 312
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 313 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 343
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 94
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 201 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 243 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 297
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 298 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 328
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 145
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 193
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 194 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 236 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 290
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 291 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 321
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 79
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFR 137
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 185
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 186 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 228 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 282
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 283 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 313
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 167
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 216
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 217 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 258 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 312
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 313 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 343
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFR 133
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 181
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 182 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 278
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 279 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 76
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 134
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 182
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 183 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 225 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 279
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 280 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 310
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 154
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 212
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 261
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 262 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 303 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 357
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 358 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 388
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 88
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 146
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 195
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 196 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 237 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 291
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 292 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 322
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 111
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 169
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 218
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 219 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 260 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 314
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 315 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 345
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 145
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 193
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 194 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 236 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 290
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 291 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 321
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 133
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVS-- 181
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 182 ------------------XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 278
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 279 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 113
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL--PVIYVKLYMYQLFR 171
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 220
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 221 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 262 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 316
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 317 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 347
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 177/334 (52%), Gaps = 65/334 (19%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVV++A+ V ++ +A+KK+ ++ + RE+ +++ ++H N+
Sbjct: 42 YTNCKVIGNGSFGVVFQAK-LVESDEVAIKKVLQDKRFKN------RELQIMRIVKHPNV 94
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD----------LDLKKHMDSCPDFANDPRLIKTF 107
V L+ +S +KK L LV EY+ LK+ M LIK +
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML--------LIKLY 146
Query: 108 LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGS 167
+YQ+LR +AY HS + HRD+KPQNLL+D + LKL DFG A+ G
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL----------IAGE 196
Query: 168 TGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
+S + + +YRAPE++ G+ +Y+T +D+WS GC+ AE++
Sbjct: 197 PNVS--------------------XICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
Query: 228 NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDF-KSAFPKWPSKELGTVVR-NL 285
+PLFPG+S ID+L +I +VLGTP+ + T P++ + FP+ V R
Sbjct: 237 QGQPLFPGESGIDQLVEIIKVLGTPSREQIK--TMNPNYMEHKFPQIRPHPFSKVFRPRT 294
Query: 286 EPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P IDL+S++L PS R+TA AL H +F ++
Sbjct: 295 PPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ ++ + RE+ +++++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFR 133
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 182
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 183 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 278
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 279 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 173/331 (52%), Gaps = 58/331 (17%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y + IG G++GVVY+A+ C + E +A+KK+ + + RE+ +++++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 64 VRLQDVVHS--EKK----LYLVFEYLD---LDLKKHMDSCPDFANDPRL-IKTFLYQILR 113
VRL+ +S EKK L LV +Y+ + +H P + +K ++YQ+ R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFR 133
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS + HRD+KPQNLL+D T LKL DFG A+ VR G +S
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VR-------GEPNVSY- 182
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + +YRAPE++ G+ Y++ +DVWS GC+ AE++ +P+F
Sbjct: 183 -------------------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 234 PGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELGTVVR-NLEPA 288
PGDS +D+L +I +VLGTP + P T +FK FP+ + V R P
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYT---EFK--FPQIKAHPWTKVFRPRTPPE 278
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
I L S++L P+ R+T A H +F ++
Sbjct: 279 AIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 184/366 (50%), Gaps = 63/366 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D+YE IG G+YG V +A + + +A+KKI ED +REI++L + H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 62 NIVRLQDVV---HSEK--KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
++V++ D+V EK +LY+V E D D KK + P + + IKT LY +L G+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKK-LFRTPVYLTELH-IKTLLYNLLVGVK 170
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI---- 172
Y HS +LHRDLKP N L+++ ++K+ DFGLAR P G++ + I
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPEN-------GNSQLPISPRE 222
Query: 173 ----YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
+F + L L VVT WYRAPE++L +Y+ +DVWS+GCIFAE++N
Sbjct: 223 DDMNLVTFPHTKNLKRQLTGH---VVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
Query: 229 -----------QRPLFPGDS--------------------EIDELFKIFRVLGTPNEDTW 257
+ PLFPG S D+L IF +LGTP+E+
Sbjct: 280 MIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDI 339
Query: 258 PGVTSLPDFKSAFPKWPSKELGTVVRNLEPA----GIDLLSKMLCMDPSRRITARSALEH 313
+ D K +P +E GT + PA I LL +ML +P++RIT L H
Sbjct: 340 EALEK-EDAKRYIRIFPKRE-GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397
Query: 314 EYFRDV 319
+F++V
Sbjct: 398 PFFKEV 403
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 175/354 (49%), Gaps = 47/354 (13%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y IG G+YG VY A + T + +A+KK+ ED +REI++L ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 62 NIVRLQDVVHSEK-----KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
I+RL D++ + +LY+V E D DLKK + P F + IKT LY +L G
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEEH-IKTILYNLLLGEN 143
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT-FTHEHWGSTGISIYFS 175
+ H ++HRDLKP N L+++ ++K+ DFGLAR T ++ + +
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-------- 227
L+ ++ + VVT WYRAPE++L +Y+ +D+WS GCIFAE++
Sbjct: 203 NLKKQLTS--------HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254
Query: 228 ---NQRPLFPGD-----------------SEIDELFKIFRVLGTPNEDTWPGVT--SLPD 265
N+ PLFPG S D+L IF ++GTP ED + +
Sbjct: 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIK 314
Query: 266 FKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
+ FP L ++ GI+LL ML +P++RIT AL+H Y +DV
Sbjct: 315 YIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI----QMELDHERMSYLLYQMLXG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI----QMELDHERMSYLLYQMLXG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI----QMELDHERMSYLLYQMLXG 131
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLART---------------------- 168
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 169 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 275
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 276 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQAR--DLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 165/334 (49%), Gaps = 46/334 (13%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y ++ +G G G+V+ A + ++ +A+KKI L D A+REI +++ + H N
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDN 69
Query: 63 IVR-----------LQDVVHSEKKL---YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL 108
IV+ L D V S +L Y+V EY++ DL ++ P RL F+
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL---FM 126
Query: 109 YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGST 168
YQ+LRG+ Y HS VLHRDLKP NL I+ LK+ DFGLAR I ++H+ S
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR---IMDPHYSHKGHLSE 183
Query: 169 GISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G+ VT WYR+P +LL +Y+ +D+W+ GCIFAEM+
Sbjct: 184 GL-----------------------VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
Query: 229 QRPLFPGDSEIDELFKIFRVLGTPN-EDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
+ LF G E++++ I + + ED ++ +P + P K L ++ +
Sbjct: 221 GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISR 280
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 321
+D L ++L P R+TA AL H Y F
Sbjct: 281 EAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF 314
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 165/342 (48%), Gaps = 67/342 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 176
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 213
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 214 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 320
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 321 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 165/342 (48%), Gaps = 67/342 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 176
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 213
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 214 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 320
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 321 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 139
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 176
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 177 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 283
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 284 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 139
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 176
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 177 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 283
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 284 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 137
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 174
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 175 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 225
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 226 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 281
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 282 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 132
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 169
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 170 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 276
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 277 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 131
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 168
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 169 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 275
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 276 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + V + +A+KK+ +++ A RE+ L+K + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L YLV E +D +L + + D + LYQ+L G
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 132
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 169
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 170 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G+T F FP +P+
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT----FPKLFPDSLFPA 276
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +DP++RI+ AL+H Y
Sbjct: 277 DSEHNKLKASQ--ARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 164/343 (47%), Gaps = 71/343 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y++++ IG G G+V A + V +A+KK+ +++ A RE+ LLK + H
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQIL 112
NI+ L +V +K L YLV E +D +L + HM+ D + LYQ+L
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL------DHERMSYLLYQML 134
Query: 113 RGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
GI + HS ++HRDLKP N+++ + LK+ DFGLAR S
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-----------------AST 176
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
F Y VVT +YRAPE++LG Y VD+WSVGCI E+V +
Sbjct: 177 NFMMTPY-------------VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVI 222
Query: 233 FPGDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPKW-- 273
F G ID+ K+ LGTP N +PG+ F+ FP W
Sbjct: 223 FQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIA----FEELFPDWIF 278
Query: 274 PSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
PS+ ++ + DLLSKML +DP +RI+ AL H Y
Sbjct: 279 PSESERDKIKTSQ--ARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 165/343 (48%), Gaps = 71/343 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y++++ IG G G+V A + V +A+KK+ +++ A RE+ LLK + H
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKK--HMDSCPDFANDPRLIKTFLYQIL 112
NI+ L +V +K L YLV E +D +L + HM+ D + LYQ+L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL------DHERMSYLLYQML 136
Query: 113 RGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
GI + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-------------------- 175
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
A + + VVT +YRAPE++LG Y+ VD+WSVGCI E+V +
Sbjct: 176 ----------ACTNFMMTPYVVTRYYRAPEVILG-MGYAANVDIWSVGCIMGELVKGCVI 224
Query: 233 FPGDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPKW-- 273
F G ID+ K+ LGTP N +PG+ F+ FP W
Sbjct: 225 FQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIK----FEELFPDWIF 280
Query: 274 PSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
PS+ ++ + DLLSKML +DP +RI+ AL H Y
Sbjct: 281 PSESERDKIKTSQ--ARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 59/337 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQMLVG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTPNED----TWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-- 288
G ID+ K+ LGTP+ + P V + + + + + ++L V L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADS 284
Query: 289 ---------GIDLLSKMLCMDPSRRITARSALEHEYF 316
DLLSKML +D S+RI+ AL+H Y
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 59/337 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTPNED----TWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-- 288
G ID+ K+ LGTP+ + P V + + + + + ++L V L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADS 284
Query: 289 ---------GIDLLSKMLCMDPSRRITARSALEHEYF 316
DLLSKML +D S+RI+ AL+H Y
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 59/337 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTPNED----TWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-- 288
G ID+ K+ LGTP+ + P V + + + + + ++L V L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADS 284
Query: 289 ---------GIDLLSKMLCMDPSRRITARSALEHEYF 316
DLLSKML +D S+RI+ AL+H Y
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 163/341 (47%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + +VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 176 --------AGTSFMMTPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G + F+ FP +P+
Sbjct: 227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS----FEKLFPDVLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +D S+RI+ AL+H Y
Sbjct: 283 DSEHNALKASQ--ARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 59/337 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTPNED----TWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-- 288
G ID+ K+ LGTP+ + P V + + + + + ++L V L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADS 284
Query: 289 ---------GIDLLSKMLCMDPSRRITARSALEHEYF 316
DLLSKML +D S+RI+ AL+H Y
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + +VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 176 --------AGTSFMMEPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVCHKILFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G + F+ FP +P+
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYS----FEKLFPDVLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +D S+RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQ--ARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 59/337 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTPNED----TWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-- 288
G ID+ K+ LGTP+ + P V + + + + + ++L V L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADS 284
Query: 289 ---------GIDLLSKMLCMDPSRRITARSALEHEYF 316
DLLSKML +D S+RI+ AL+H Y
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + +VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 176 --------AGTSFMMEPEVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G + F+ FP +P+
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS----FEKLFPDVLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +D S+RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQ--ARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 162/337 (48%), Gaps = 59/337 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ----VIQMELDHERMSYLLYQMLVG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVG I EM+ LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTPNED----TWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-- 288
G ID+ K+ LGTP+ + P V + + + + + ++L V L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADS 284
Query: 289 ---------GIDLLSKMLCMDPSRRITARSALEHEYF 316
DLLSKML +D S+RI+ AL+H Y
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 163/341 (47%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 143
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 180
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 181 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFP 231
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G + F+ FP +P+
Sbjct: 232 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS----FEKLFPDVLFPA 287
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +D S+RI+ AL+H Y
Sbjct: 288 DSEHNKLKASQ--ARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 162/341 (47%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 139
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 176
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 177 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 227
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G + F+ FP +P+
Sbjct: 228 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS----FEKLFPDVLFPA 283
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +D S+RI+ AL+H Y
Sbjct: 284 DSEHNKLKASQAR--DLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 162/341 (47%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 140
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 177
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 178 --------AGTSFMMVPFVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 228
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G + F+ FP +P+
Sbjct: 229 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS----FEKLFPDVLFPA 284
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +D S+RI+ AL+H Y
Sbjct: 285 DSEHNKLKASQAR--DLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 162/341 (47%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EM+ LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G + F+ FP +P+
Sbjct: 227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS----FEKLFPDVLFPA 282
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +D S+RI+ AL+H Y
Sbjct: 283 DSEHNKLKASQAR--DLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 163/341 (47%), Gaps = 67/341 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLCG 132
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLART---------------------- 169
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVGCI EMV + LFP
Sbjct: 170 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIMGEMVCHKILFP 220
Query: 235 GDSEIDELFKIFRVLGTP-----------------NEDTWPGVTSLPDFKSAFPK--WPS 275
G ID+ K+ LGTP N + G + F+ FP +P+
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS----FEKLFPDVLFPA 276
Query: 276 KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
++ + DLLSKML +D S+RI+ AL+H Y
Sbjct: 277 DSEHNKLKASQ--ARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 163/337 (48%), Gaps = 59/337 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +Y+ ++ IG G G+V A + + +A+KK+ +++ A RE+ L+K + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 61 GNIVRLQDVVHSEKKL------YLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NI+ L +V +K L Y+V E +D +L + + D + LYQ+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQMLVG 138
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
I + HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLART---------------------- 175
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
AG+ + VVT +YRAPE++LG Y VD+WSVG I EM+ LFP
Sbjct: 176 --------AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIMGEMIKGGVLFP 226
Query: 235 GDSEIDELFKIFRVLGTPNED----TWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA-- 288
G ID+ K+ LGTP+ + P V + + + + + ++L V L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV--LFPADS 284
Query: 289 ---------GIDLLSKMLCMDPSRRITARSALEHEYF 316
DLLSKML +D S+RI+ AL+H Y
Sbjct: 285 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 165/333 (49%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK-----IKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 61/340 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-- 58
MD+++ G+GT+G V + T ++A+KK+ + P RE+ +++++
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD------PRFRNRELQIMQDLAV 75
Query: 59 -QHGNIVRLQDVVHS-----EKKLYL--VFEYLDLDLKKHMDSCPDF-----ANDPRLIK 105
H NIV+LQ ++ + +YL V EY+ L + C ++ A P LIK
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHR---CCRNYYRRQVAPPPILIK 132
Query: 106 TFLYQILRGIAYCH--SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHE 163
FL+Q++R I H S V HRD+KP N+L++ LKL DFG A+ +
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY- 191
Query: 164 HWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIF 223
+ + +YRAPE++ G++HY+T VD+WSVGCIF
Sbjct: 192 -----------------------------ICSRYYRAPELIFGNQHYTTAVDIWSVGCIF 222
Query: 224 AEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTW----PGVTSLPDFKSAFPKWPSKELG 279
AEM+ P+F GD+ +L +I RVLG P+ + P T + + S W +
Sbjct: 223 AEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSD 282
Query: 280 TVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
+++ + A DLLS +L P R+ AL H YF ++
Sbjct: 283 HSLKDAKEA-YDLLSALLQYLPEERMKPYEALCHPYFDEL 321
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 165/359 (45%), Gaps = 86/359 (23%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + +G G++G+V + + + + ALKK+ + P RE+ ++K + H N
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD------PRYKNRELDIMKVLDHVN 61
Query: 63 IVRLQDVVHS--------------------------------------EKKLYLVFEYLD 84
I++L D ++ K L ++ EY+
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 85 LDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT 139
L K + S F R LI ++YQ+ R + + HS + HRD+KPQNLL++ +
Sbjct: 122 DTLHKVLKS---FIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178
Query: 140 NALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYR 199
N LKL DFG A+ IP + + +YR
Sbjct: 179 NTLKLCDFGSAKKL-IPSEP-----------------------------SVAXICSRFYR 208
Query: 200 APEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPG 259
APE++LG+ Y+ +D+WS+GC+F E++ +PLF G++ ID+L +I +++GTP ++
Sbjct: 209 APELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM-- 266
Query: 260 VTSLPDFKSA-FPKWPSKELGTVVRNLEPA-GIDLLSKMLCMDPSRRITARSALEHEYF 316
+ P + FP +K+ ++ P+ IDLL ++L +P RI A+ H +F
Sbjct: 267 IRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 153/326 (46%), Gaps = 54/326 (16%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ-----------EDEGVPSTAIREISLLKEM 58
I G+YG V V +E I + R+ D + +REI LL
Sbjct: 30 ISSGSYGAVCAG---VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 59 QHGNIVRLQDV-VHSEK----KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H NI+ L+D+ VH E+ KLYLV E + DL + + P+ I+ F+Y IL
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYFMYHILL 145
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ H V+HRDL P N+L+ N + + DF LAR E + Y
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILL-ADNNDITICDFNLAR-----------EDTADANKTHY 193
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
V WYRAPE+++ + ++ VD+WS GC+ AEM N++ LF
Sbjct: 194 -------------------VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
Query: 234 PGDSEIDELFKIFRVLGTPN-EDT--WPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
G + ++L KI V+GTP ED + ++ +++ P++ VV +P +
Sbjct: 235 RGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL 294
Query: 291 DLLSKMLCMDPSRRITARSALEHEYF 316
DL++KML +P RRI+ AL H YF
Sbjct: 295 DLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 153/326 (46%), Gaps = 54/326 (16%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ-----------EDEGVPSTAIREISLLKEM 58
I G+YG V V +E I + R+ D + +REI LL
Sbjct: 30 ISSGSYGAVCAG---VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 59 QHGNIVRLQDV-VHSEK----KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H NI+ L+D+ VH E+ KLYLV E + DL + + P+ I+ F+Y IL
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYFMYHILL 145
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ H V+HRDL P N+L+ N + + DF LAR E + Y
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILL-ADNNDITICDFNLAR-----------EDTADANKTHY 193
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
V WYRAPE+++ + ++ VD+WS GC+ AEM N++ LF
Sbjct: 194 -------------------VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
Query: 234 PGDSEIDELFKIFRVLGTPN-EDT--WPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
G + ++L KI V+GTP ED + ++ +++ P++ VV +P +
Sbjct: 235 RGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL 294
Query: 291 DLLSKMLCMDPSRRITARSALEHEYF 316
DL++KML +P RRI+ AL H YF
Sbjct: 295 DLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 164/333 (49%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE +A+K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N+LID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE-FYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 162/330 (49%), Gaps = 57/330 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE ++ ++ RE+ +L+ ++ G
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNE-----RVVVKILKPVKKKKIKREVKILENLRGG 92
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI++L D V K LVFEY++ D K+ DF I+ ++Y++L+ + Y
Sbjct: 93 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD-----IRFYMYELLKALDY 147
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID + L+L D+GLA F P + +
Sbjct: 148 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYN---------------- 190
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ +R P F G
Sbjct: 191 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQ 237
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT E+ + + P F + K + + +
Sbjct: 238 DNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVS 295
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
P +DLL K+L D +R+TA+ A+EH YF
Sbjct: 296 PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 162/330 (49%), Gaps = 57/330 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE ++ ++ RE+ +L+ ++ G
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNE-----RVVVKILKPVKKKKIKREVKILENLRGG 97
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI++L D V K LVFEY++ D K+ DF I+ ++Y++L+ + Y
Sbjct: 98 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFD-----IRFYMYELLKALDY 152
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID + L+L D+GLA F P + +
Sbjct: 153 CHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYN---------------- 195
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ +R P F G
Sbjct: 196 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQ 242
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT E+ + + P F + K + + +
Sbjct: 243 DNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVS 300
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
P +DLL K+L D +R+TA+ A+EH YF
Sbjct: 301 PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 90
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 145
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYN---------------- 188
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 189 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 235
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 236 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 293
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 294 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 90
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 145
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN---------------- 188
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 189 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 235
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 236 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 293
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 294 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 96
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 151
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 152 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYN---------------- 194
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 195 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 241
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 242 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 299
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 300 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 332
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 89
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 144
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN---------------- 187
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 188 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 234
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 235 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 292
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 293 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 162/330 (49%), Gaps = 57/330 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
P +D L K+L D R+TAR A+EH YF
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ V K+G G Y V++A N NE + +K ++ ++ REI +L+ ++ G
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 91
Query: 62 -NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NI+ L D+V + LVFE+++ D K+ + D+ I+ ++Y+IL+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYD-----IRFYMYEILKALDY 146
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYN---------------- 189
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+ A M+ + P F G
Sbjct: 190 -------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL-----PDFKSAFPKWPSKELGTVVRN-----LE 286
D+L +I +VLGT ED + + P F + K V + +
Sbjct: 237 DNYDQLVRIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 294
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
P +D L K+L D R+TAR A+EH YF V
Sbjct: 295 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 161
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 162 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 204
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 205 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 251
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 252 DNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 310
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 311 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 342
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 141
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 142 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 184
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 185 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 231
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 232 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 290
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 291 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 140
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 183
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 184 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 231 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 289
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 290 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 140
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 183
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 184 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 231 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 289
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 290 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 140
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 183
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 184 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 231 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 289
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 290 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLMGG 85
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 140
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 183
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 184 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 231 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 289
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 290 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 142
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 143 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 185
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 186 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 232
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 233 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 291
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 292 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 323
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 141
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 142 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 184
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 185 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 231
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 232 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 290
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 291 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 140
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 183
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 184 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 231 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 289
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 290 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 157/332 (47%), Gaps = 55/332 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE V K+G G Y V++ N NE K ++ REI +L+ + G
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 62 -NIVRLQDVVHSE--KKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+L D+V + K L+FEY++ D K + D+ I+ ++Y++L+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYD-----IRYYIYELLKALDY 140
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CHS ++HRD+KP N++ID L+L D+GLA F P + +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYN---------------- 183
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRPLFPGD 236
++V + +++ PE+L+ + Y +D+WS+GC+FA M+ + P F G
Sbjct: 184 -------------VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 237 SEIDELFKIFRVLGTPNEDTW---------PGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
D+L KI +VLGT + + P + +L S P W + P
Sbjct: 231 DNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP-WLKFMNADNQHLVSP 289
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
ID L K+L D R+TA A+ H YF+ V
Sbjct: 290 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 165/352 (46%), Gaps = 73/352 (20%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+YE ++ IG+G++G V KA + ++ +ALK +R E+ A EI +L+ ++ +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLRKQD 154
Query: 63 IVRLQDVVHS------EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+V+H + + FE L ++L + + L++ F + IL+ +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 117 YCHSHRVLHRDLKPQNLLIDRRT-NALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H +R++H DLKP+N+L+ ++ + +K+ DFG + +EH
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----------SSCYEHQ---------- 254
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
RV + + + +YRAPE++LG+R Y P+D+WS+GCI AE++ PL PG
Sbjct: 255 ----RV--------YTXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPG 301
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS--AFPKW-------------------- 273
+ E D+L + +LG P++ +F S +P++
Sbjct: 302 EDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRR 361
Query: 274 -------PSKELGTVVRNL-EPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
S+E G ++ +P +D L + L DP+ R+T AL H + R
Sbjct: 362 GKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 165/352 (46%), Gaps = 73/352 (20%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+YE ++ IG+G++G V KA + ++ +ALK +R E+ A EI +L+ ++ +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLRKQD 154
Query: 63 IVRLQDVVHS------EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+V+H + + FE L ++L + + L++ F + IL+ +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 117 YCHSHRVLHRDLKPQNLLIDRRT-NALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H +R++H DLKP+N+L+ ++ + +K+ DFG + +EH
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----------SSCYEHQ---------- 254
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
RV + + + +YRAPE++LG+R Y P+D+WS+GCI AE++ PL PG
Sbjct: 255 ----RV--------YTXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPG 301
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS--AFPKW-------------------- 273
+ E D+L + +LG P++ +F S +P++
Sbjct: 302 EDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRR 361
Query: 274 -------PSKELGTVVRNL-EPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
S+E G ++ +P +D L + L DP+ R+T AL H + R
Sbjct: 362 GKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 73/352 (20%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+YE ++ IG+G +G V KA + ++ +ALK +R E+ A EI +L+ ++ +
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKR---FHRQAAEEIRILEHLRKQD 154
Query: 63 IVRLQDVVHS------EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+V+H + + FE L ++L + + L++ F + IL+ +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 117 YCHSHRVLHRDLKPQNLLIDRRT-NALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H +R++H DLKP+N+L+ ++ + +K+ DFG + +EH
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----------SSCYEHQ---------- 254
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
RV + + + +YRAPE++LG+R Y P+D+WS+GCI AE++ PL PG
Sbjct: 255 ----RV--------YXXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPG 301
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS--AFPKW-------------------- 273
+ E D+L + +LG P + +F S +P++
Sbjct: 302 EDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRR 361
Query: 274 -------PSKELGTVVRNL-EPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
S+E G ++ +P +D L + L DP+ R+T AL H + R
Sbjct: 362 GKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 146/320 (45%), Gaps = 67/320 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIR---LEQEDEGVPSTAIREISLLKE 57
+ Y+ V+ +GEG++G V A + T + +ALK I L + D + REIS L+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 60
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
++H +I++L DV+ S+ ++ +V EY +L ++ + + F QI+ + Y
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRFFQQIISAVEY 118
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CH H+++HRDLKP+NLL+D N +K+ADFGL+ + F GS
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSNI--MTDGNFLKTSCGSPN-------- 167
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE++ G + VDVWS G I M+ +R F D
Sbjct: 168 --------------------YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDE 206
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
I LFK + GV +LP F L P L+ +ML
Sbjct: 207 SIPVLFK----------NISNGVYTLPKF------------------LSPGAAGLIKRML 238
Query: 298 CMDPSRRITARSALEHEYFR 317
++P RI+ ++ ++F+
Sbjct: 239 IVNPLNRISIHEIMQDDWFK 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 146/320 (45%), Gaps = 67/320 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIR---LEQEDEGVPSTAIREISLLKE 57
+ Y+ V+ +GEG++G V A + T + +ALK I L + D + REIS L+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
++H +I++L DV+ S+ ++ +V EY +L ++ + + F QI+ + Y
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRFFQQIISAVEY 128
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CH H+++HRDLKP+NLL+D N +K+ADFGL+ + F GS
Sbjct: 129 CHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSNI--MTDGNFLKTSCGSPN-------- 177
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE++ G + VDVWS G I M+ +R F D
Sbjct: 178 --------------------YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDE 216
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
I LFK + GV +LP F L P L+ +ML
Sbjct: 217 SIPVLFK----------NISNGVYTLPKF------------------LSPGAAGLIKRML 248
Query: 298 CMDPSRRITARSALEHEYFR 317
++P RI+ ++ ++F+
Sbjct: 249 IVNPLNRISIHEIMQDDWFK 268
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 146/320 (45%), Gaps = 67/320 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIR---LEQEDEGVPSTAIREISLLKE 57
+ Y+ V+ +GEG++G V A + T + +ALK I L + D + REIS L+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 64
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
++H +I++L DV+ S+ ++ +V EY +L ++ + + F QI+ + Y
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRFFQQIISAVEY 122
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CH H+++HRDLKP+NLL+D N +K+ADFGL+ + F GS
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSNI--MTDGNFLKTSCGSPN-------- 171
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE++ G + VDVWS G I M+ +R F D
Sbjct: 172 --------------------YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDE 210
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
I LFK + GV +LP F L P L+ +ML
Sbjct: 211 SIPVLFK----------NISNGVYTLPKF------------------LSPGAAGLIKRML 242
Query: 298 CMDPSRRITARSALEHEYFR 317
++P RI+ ++ ++F+
Sbjct: 243 IVNPLNRISIHEIMQDDWFK 262
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 146/320 (45%), Gaps = 67/320 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIR---LEQEDEGVPSTAIREISLLKE 57
+ Y+ V+ +GEG++G V A + T + +ALK I L + D + REIS L+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 69
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
++H +I++L DV+ S+ ++ +V EY +L ++ + + F QI+ + Y
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRFFQQIISAVEY 127
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
CH H+++HRDLKP+NLL+D N +K+ADFGL+ + F GS
Sbjct: 128 CHRHKIVHRDLKPENLLLDEHLN-VKIADFGLSNI--MTDGNFLKTSCGSPN-------- 176
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE++ G + VDVWS G I M+ +R F D
Sbjct: 177 --------------------YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-DDE 215
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
I LFK + GV +LP F L P L+ +ML
Sbjct: 216 SIPVLFK----------NISNGVYTLPKF------------------LSPGAAGLIKRML 247
Query: 298 CMDPSRRITARSALEHEYFR 317
++P RI+ ++ ++F+
Sbjct: 248 IVNPLNRISIHEIMQDDWFK 267
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 143/324 (44%), Gaps = 72/324 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y V +G+G++G V K ++ +T + A+K I ST +RE+ LLK++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62 NIVRLQDVVHSEKKLYLV------FEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI++L +++ Y+V E D +K+ S D A R+IK Q+ GI
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIK----QVFSGI 134
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y H H ++HRDLKP+N+L++ + +K+ DFGL+ F +
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD------------ 182
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
++ T +Y APE+L G+ Y DVWS G I +++ P F
Sbjct: 183 ------------------RIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPF 222
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
G +E D L ++ + P+W R + DL+
Sbjct: 223 YGKNEYDILKRV----------------ETGKYAFDLPQW---------RTISDDAKDLI 257
Query: 294 SKMLCMDPSRRITARSALEHEYFR 317
KML PS RITA LEH + +
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 143/324 (44%), Gaps = 72/324 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y V +G+G++G V K ++ +T + A+K I ST +RE+ LLK++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62 NIVRLQDVVHSEKKLYLV------FEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI++L +++ Y+V E D +K+ S D A R+IK Q+ GI
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIK----QVFSGI 134
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y H H ++HRDLKP+N+L++ + +K+ DFGL+ F +
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD------------ 182
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
++ T +Y APE+L G+ Y DVWS G I +++ P F
Sbjct: 183 ------------------RIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPF 222
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
G +E D L ++ + P+W R + DL+
Sbjct: 223 YGKNEYDILKRV----------------ETGKYAFDLPQW---------RTISDDAKDLI 257
Query: 294 SKMLCMDPSRRITARSALEHEYFR 317
KML PS RITA LEH + +
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 141/320 (44%), Gaps = 72/320 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y V +G+G++G V K ++ +T + A+K I ST +RE+ LLK++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62 NIVRLQDVVHSEKKLYLV------FEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI++L +++ Y+V E D +K+ S D A R+IK Q+ GI
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIK----QVFSGI 134
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y H H ++HRDLKP+N+L++ + +K+ DFGL+ F +
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD------------ 182
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
++ T +Y APE+L G+ Y DVWS G I +++ P F
Sbjct: 183 ------------------RIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPF 222
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
G +E D L ++ + P+W R + DL+
Sbjct: 223 YGKNEYDILKRV----------------ETGKYAFDLPQW---------RTISDDAKDLI 257
Query: 294 SKMLCMDPSRRITARSALEH 313
KML PS RITA LEH
Sbjct: 258 RKMLTFHPSLRITATQCLEH 277
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 150/322 (46%), Gaps = 64/322 (19%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
+ Y++V+K+G G YG V R+ VT+ A+K IR S + E+++LK + H
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 62 NIVRLQDVVHSEKKLYLVFE-YLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCH 119
NI++L D ++ YLV E Y +L + F D +I + Q+L G+ Y H
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVI---IKQVLSGVTYLH 153
Query: 120 SHRVLHRDLKPQNLLID-RRTNAL-KLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
H ++HRDLKP+NLL++ + +AL K+ DFGL+ F + E G
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMKERLG----------- 200
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
T +Y APE+L + Y DVWS+G I ++ P F G +
Sbjct: 201 -----------------TAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQT 241
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
+ + L K+ + G D+ P+W +N+ DL+ +ML
Sbjct: 242 DQEILRKVEK--GKYTFDS--------------PEW---------KNVSEGAKDLIKQML 276
Query: 298 CMDPSRRITARSALEHEYFRDV 319
D RRI+A+ ALEH + +++
Sbjct: 277 QFDSQRRISAQQALEHPWIKEM 298
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 67/322 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAI-REISLLKEMQH 60
D+Y+ +G+G++G V ++ +T + A+K I Q + ++ RE+ LLK++ H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 61 GNIVRLQDVVHSEKKLYLVFE-YLDLDLKKHMDSCPDFA--NDPRLIKTFLYQILRGIAY 117
NI++L + + YLV E Y +L + S F+ + R+I+ Q+L GI Y
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVLSGITY 147
Query: 118 CHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H ++++HRDLKP+NLL++ ++ +++ DFGL+ F +
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-------------- 193
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
K+ T +Y APE+L G+ Y DVWS G I +++ P F G
Sbjct: 194 ----------------KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNG 235
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+E D L K+ + + P+W + + + DL+ K
Sbjct: 236 ANEYDILKKVEK----------------GKYTFELPQW---------KKVSESAKDLIRK 270
Query: 296 MLCMDPSRRITARSALEHEYFR 317
ML PS RI+AR AL+HE+ +
Sbjct: 271 MLTYVPSMRISARDALDHEWIQ 292
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 67/322 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAI-REISLLKEMQH 60
D+Y+ +G+G++G V ++ +T + A+K I Q + ++ RE+ LLK++ H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 61 GNIVRLQDVVHSEKKLYLVFE-YLDLDLKKHMDSCPDFA--NDPRLIKTFLYQILRGIAY 117
NI++L + + YLV E Y +L + S F+ + R+I+ Q+L GI Y
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVLSGITY 164
Query: 118 CHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H ++++HRDLKP+NLL++ ++ +++ DFGL+ F +
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-------------- 210
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
K+ T +Y APE+L G+ Y DVWS G I +++ P F G
Sbjct: 211 ----------------KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNG 252
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+E D L K+ + + P+W + + + DL+ K
Sbjct: 253 ANEYDILKKVEK----------------GKYTFELPQW---------KKVSESAKDLIRK 287
Query: 296 MLCMDPSRRITARSALEHEYFR 317
ML PS RI+AR AL+HE+ +
Sbjct: 288 MLTYVPSMRISARDALDHEWIQ 309
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 67/322 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAI-REISLLKEMQH 60
D+Y+ +G+G++G V ++ +T + A+K I Q + ++ RE+ LLK++ H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 61 GNIVRLQDVVHSEKKLYLVFE-YLDLDLKKHMDSCPDFA--NDPRLIKTFLYQILRGIAY 117
NI++L + + YLV E Y +L + S F+ + R+I+ Q+L GI Y
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVLSGITY 165
Query: 118 CHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H ++++HRDLKP+NLL++ ++ +++ DFGL+ F +
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-------------- 211
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
K+ T +Y APE+L G+ Y DVWS G I +++ P F G
Sbjct: 212 ----------------KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNG 253
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+E D L K+ + + P+W + + + DL+ K
Sbjct: 254 ANEYDILKKVEK----------------GKYTFELPQW---------KKVSESAKDLIRK 288
Query: 296 MLCMDPSRRITARSALEHEYFR 317
ML PS RI+AR AL+HE+ +
Sbjct: 289 MLTYVPSMRISARDALDHEWIQ 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 67/322 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAI-REISLLKEMQH 60
D+Y+ +G+G++G V ++ +T + A+K I Q + ++ RE+ LLK++ H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 61 GNIVRLQDVVHSEKKLYLVFE-YLDLDLKKHMDSCPDFA--NDPRLIKTFLYQILRGIAY 117
NI++L + + YLV E Y +L + S F+ + R+I+ Q+L GI Y
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVLSGITY 141
Query: 118 CHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H ++++HRDLKP+NLL++ ++ +++ DFGL+ F +
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-------------- 187
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
K+ T +Y APE+L G+ Y DVWS G I +++ P F G
Sbjct: 188 ----------------KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNG 229
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+E D L K+ + + P+W + + + DL+ K
Sbjct: 230 ANEYDILKKVEK----------------GKYTFELPQW---------KKVSESAKDLIRK 264
Query: 296 MLCMDPSRRITARSALEHEYFR 317
ML PS RI+AR AL+HE+ +
Sbjct: 265 MLTYVPSMRISARDALDHEWIQ 286
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 67/322 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAI-REISLLKEMQH 60
D+Y+ +G+G++G V ++ +T + A+K I Q + ++ RE+ LLK++ H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 61 GNIVRLQDVVHSEKKLYLVFE-YLDLDLKKHMDSCPDFA--NDPRLIKTFLYQILRGIAY 117
NI +L + + YLV E Y +L + S F+ + R+I+ Q+L GI Y
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVLSGITY 141
Query: 118 CHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H ++++HRDLKP+NLL++ ++ +++ DFGL+ F +
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD-------------- 187
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
K+ T +Y APE+L G+ Y DVWS G I +++ P F G
Sbjct: 188 ----------------KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNG 229
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+E D L K+ + + P+W + + + DL+ K
Sbjct: 230 ANEYDILKKVEK----------------GKYTFELPQW---------KKVSESAKDLIRK 264
Query: 296 MLCMDPSRRITARSALEHEYFR 317
L PS RI+AR AL+HE+ +
Sbjct: 265 XLTYVPSXRISARDALDHEWIQ 286
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 128
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 129 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 166
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 167 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 215
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 216 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 246
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 247 HNPSQRPMLREVLEHPW 263
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS +V+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 125 HSKKVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 162
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 163 RAALCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
D +I RV T PDF + DL+S++L
Sbjct: 212 QDTYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 242
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 150
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 151 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 188
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 189 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 238 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 268
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 269 HNPSQRPMLREVLEHPW 285
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 142/315 (45%), Gaps = 66/315 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 141
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 142 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 179
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 180 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 228
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 229 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 259
Query: 299 MDPSRRITARSALEH 313
+PS+R R LEH
Sbjct: 260 HNPSQRPMLREVLEH 274
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 127
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 128 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 165
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 166 RAALCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 215 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 245
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 246 HNPSQRPMLREVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 129
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 130 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 167
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 168 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 217 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 247
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 248 HNPSQRPMLREVLEHPW 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 127
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 128 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 165
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 166 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 215 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 245
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 246 HNPSQRPMLREVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 125 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 162
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 163 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 212 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 242
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 127
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 128 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 165
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 166 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 215 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 245
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 246 HNPSQRPMLREVLEHPW 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 125
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 126 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 163
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 164 RDTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 213 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 243
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 244 HNPSQRPMLREVLEHPW 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 125 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 162
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 163 RAALCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 212 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 242
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 123
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 124 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 161
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 162 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 210
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 211 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 241
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 242 HNPSQRPMLREVLEHPW 258
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 142/315 (45%), Gaps = 66/315 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY ++ K + F D + T++ ++ ++YC
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF--DEQRTATYITELANALSYC 129
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 130 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 167
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 168 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 217 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 247
Query: 299 MDPSRRITARSALEH 313
+PS+R R LEH
Sbjct: 248 HNPSQRPMLREVLEH 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 125 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 162
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 163 RXXLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 212 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 242
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 126
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 127 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 164
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 165 RXXLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 214 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 244
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 245 HNPSQRPMLREVLEHPW 261
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 127
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 128 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 165
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 166 RXXLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 215 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 245
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 246 HNPSQRPMLREVLEHPW 262
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 129
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 130 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 167
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE + G R + VD+WS+G + E + +P F ++
Sbjct: 168 RTTLCG----------TLDYLPPEXIEG-RXHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 217 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 247
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 248 HNPSQRPXLREVLEHPW 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 125 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 162
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 163 RTXLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 212 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 242
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 125
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S + R
Sbjct: 126 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SCHAPSSR 163
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L+G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 164 RTTLSG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 213 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 243
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 244 HNPSQRPMLREVLEHPW 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGELKIADFG----------------W-----SVHAPSSR 162
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 163 RTELCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 212 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 242
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 142/315 (45%), Gaps = 66/315 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY ++ K + F D + T++ ++ ++YC
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF--DEQRTATYITELANALSYC 129
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGELKIADFG----------------W-----SVHAPSSR 167
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 168 RXXLXG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 217 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 247
Query: 299 MDPSRRITARSALEH 313
+PS+R R LEH
Sbjct: 248 HNPSQRPMLREVLEH 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 141/317 (44%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR +ALK + + + E GV RE+ + ++
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 121
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 122 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 159
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G H VD+WS+G + E + +P F ++
Sbjct: 160 RTTLCG----------TLDYLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTY 208
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 209 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 239
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 240 HNPSQRPMLREVLEHPW 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 125
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 126 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 163
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 164 RTDLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 213 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 243
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 244 HNPSQRPMLREVLEHPW 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 126
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+A+FG W S++ R
Sbjct: 127 HSKRVIHRDIKPENLLLG-SAGELKIANFG----------------W-----SVHAPSSR 164
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 165 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 214 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 244
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 245 HNPSQRPMLREVLEHPW 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 129
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 130 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 167
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 168 RTDLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 217 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 247
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 248 HNPSQRPMLREVLEHPW 264
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 150
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 151 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 188
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 189 RDDLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 238 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 268
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 269 HNPSQRPMLREVLEHPW 285
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 127
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+A+FG W S++ R
Sbjct: 128 HSKRVIHRDIKPENLLLG-SAGELKIANFG----------------W-----SVHAPSSR 165
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 166 RTTLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 215 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 245
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 246 HNPSQRPMLREVLEHPW 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 125 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 162
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 163 RTDLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 212 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 242
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 125 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 162
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 163 RTDLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 212 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 242
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 66/317 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQ 59
++ +E +G+G +G VY AR + +ALK + + + E GV RE+ + ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL H ++YL+ EY L + + + F D + T++ ++ ++YC
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYC 127
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS RV+HRD+KP+NLL+ LK+ADFG W S++ R
Sbjct: 128 HSKRVIHRDIKPENLLLG-SAGELKIADFG----------------W-----SVHAPSSR 165
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
L G TL Y PE++ G R + VD+WS+G + E + +P F ++
Sbjct: 166 RDDLCG----------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I RV T PDF + DL+S++L
Sbjct: 215 QETYKRISRVEFT-----------FPDF------------------VTEGARDLISRLLK 245
Query: 299 MDPSRRITARSALEHEY 315
+PS+R R LEH +
Sbjct: 246 HNPSQRPMLREVLEHPW 262
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 134/311 (43%), Gaps = 65/311 (20%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
E +GEG++G V A + T + +ALK I R + + REIS LK ++H +I++L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
DV+ + + +V EY +L ++ D + F QI+ I YCH H+++HR
Sbjct: 75 YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG--RRFFQQIICAIEYCHRHKIVHR 132
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+NLL+D N +K+ADFGL+ + F GS
Sbjct: 133 DLKPENLLLDDNLN-VKIADFGLSNI--MTDGNFLKTSCGSPN----------------- 172
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE-IDELFKI 245
Y APE++ G + VDVWS G + M+ R P D E I LFK
Sbjct: 173 -----------YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR--LPFDDEFIPNLFK- 218
Query: 246 FRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
V +PDF L P L+ +M+ DP +RI
Sbjct: 219 ---------KVNSCVYVMPDF------------------LSPGAQSLIRRMIVADPMQRI 251
Query: 306 TARSALEHEYF 316
T + +F
Sbjct: 252 TIQEIRRDPWF 262
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 141/319 (44%), Gaps = 66/319 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQ 59
+D ++ V +G+G +G VY AR +ALK + Q E EGV REI + ++
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+R+ + H K++YL+ E+ +L K + F D + TF+ ++ + YC
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF--DEQRSATFMEELADALHYC 130
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H +V+HRD+KP+NLL+ + LK+ADFG W S++ LR
Sbjct: 131 HERKVIHRDIKPENLLMGYK-GELKIADFG----------------W-----SVHAPSLR 168
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
R + G TL Y PE++ G H VD+W G + E + P F S
Sbjct: 169 RRXMCG----------TLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I V D K FP + L DL+SK+L
Sbjct: 218 TETHRRIVNV----------------DLK--FPPF-----------LSDGSKDLISKLLR 248
Query: 299 MDPSRRITARSALEHEYFR 317
P +R+ + +EH + +
Sbjct: 249 YHPPQRLPLKGVMEHPWVK 267
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 144/336 (42%), Gaps = 85/336 (25%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIR----------- 50
+ Y KV K+G G YG V + + A+K I+ Q D+G S +
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 51 EISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKH-MDSCPDFANDPRL 103
EISLLK + H NI++L DV +K YLV E+ + + +H D C D AN
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC-DAAN---- 150
Query: 104 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNAL--KLADFGLARAFGIPVRTFT 161
+ QIL GI Y H H ++HRD+KP+N+L++ + + L K+ DFGL+ F +
Sbjct: 151 ---IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK--- 204
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
LR R + T +Y APE+L + Y+ DVWS G
Sbjct: 205 ---------------LRDR------------LGTAYYIAPEVL--KKKYNEKCDVWSCGV 235
Query: 222 IFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTV 281
I ++ P F G ++ D + K+ + + F W
Sbjct: 236 IMYILLCGYPPFGGQNDQDIIKKVEK----------------GKYYFDFNDW-------- 271
Query: 282 VRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
+N+ +L+ ML D ++R TA AL + +
Sbjct: 272 -KNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 140/313 (44%), Gaps = 66/313 (21%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+ +G GT+G V ++ +T +A+K + R + V REI LK +H +I++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 67 QDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
V+ + +++V EY+ +L ++ C + D + + QIL G+ YCH H V+H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI--CKNGRLDEKESRRLFQQILSGVDYCHRHMVVH 139
Query: 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGS 185
RDLKP+N+L+D NA K+ADFGL+ S G FLR + +
Sbjct: 140 RDLKPENVLLDAHMNA-KIADFGLSNMM-------------SDG-----EFLRXSCGSPN 180
Query: 186 LILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCI-FAEMVNQRPLFPGDSEIDELFK 244
Y APE++ G + VD+WS G I +A + P D + LFK
Sbjct: 181 ------------YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF--DDDHVPTLFK 226
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
G+ P + L P+ I LL ML +DP +R
Sbjct: 227 ----------KICDGIFYTPQY------------------LNPSVISLLKHMLQVDPMKR 258
Query: 305 ITARSALEHEYFR 317
T + EHE+F+
Sbjct: 259 ATIKDIREHEWFK 271
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 148/359 (41%), Gaps = 76/359 (21%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLK---- 56
MD+YE IG+G++G V KA + V E +A+K I+ ++ +R + L+
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
EM++ IV L+ L LVFE L +L + + L + F Q+ +
Sbjct: 113 EMKY-YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 117 YCHSHR--VLHRDLKPQN-LLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + ++H DLKP+N LL + + +A+K+ DFG + G +
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI---------------- 215
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + + +YR+PE+LLG Y +D+WS+GCI EM PLF
Sbjct: 216 ----------------YQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLF 258
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFP--KWPSKELGTVVRNLEPAGI- 290
G +E+D++ KI VLG P F P W K+ R +P G
Sbjct: 259 SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTR 318
Query: 291 --------------------------------DLLSKMLCMDPSRRITARSALEHEYFR 317
DL+ +ML DP RI AL+H +F+
Sbjct: 319 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 72/324 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D+Y+ E++G+G + VV + T + A K I ++ RE + + ++H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 62 NIVRLQDVVHSEKKLYLVFE-------YLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NIVRL D + E YLVF+ + D+ +++ A+ I+ QIL
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----ADASHCIQ----QILES 115
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
+ +CH + ++HRDLKP+NLL+ ++ A+KLADFGLA I V+ +G G
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA----IEVQGDQQAWFGFAGTPG 171
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y S PE+L Y PVD+W+ G I ++ P
Sbjct: 172 YLS-------------------------PEVLRKDP-YGKPVDMWACGVILYILLVGYPP 205
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D + L++ K+ +PS E TV P DL
Sbjct: 206 F-WDEDQHRLYQ--------------------QIKAGAYDFPSPEWDTVT----PEAKDL 240
Query: 293 LSKMLCMDPSRRITARSALEHEYF 316
++KML ++P++RITA AL+H +
Sbjct: 241 INKMLTINPAKRITASEALKHPWI 264
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 148/359 (41%), Gaps = 76/359 (21%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLK---- 56
MD+YE IG+G++G V KA + V E +A+K I+ ++ +R + L+
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
EM++ IV L+ L LVFE L +L + + L + F Q+ +
Sbjct: 94 EMKY-YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 152
Query: 117 YCHSHR--VLHRDLKPQN-LLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + ++H DLKP+N LL + + +A+K+ DFG + G +
Sbjct: 153 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI---------------- 196
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + + +YR+PE+LLG Y +D+WS+GCI EM PLF
Sbjct: 197 ----------------YQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLF 239
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFP--KWPSKELGTVVRNLEPAGI- 290
G +E+D++ KI VLG P F P W K+ R +P G
Sbjct: 240 SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTR 299
Query: 291 --------------------------------DLLSKMLCMDPSRRITARSALEHEYFR 317
DL+ +ML DP RI AL+H +F+
Sbjct: 300 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 358
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 72/324 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D+Y+ E++G+G + VV + T + A K I ++ RE + + ++H
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 62 NIVRLQDVVHSEKKLYLVFE-------YLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NIVRL D + E YLVF+ + D+ +++ A+ I+ QIL
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----ADASHCIQ----QILES 115
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
+ +CH + ++HRDLKP+NLL+ ++ A+KLADFGLA I V+ +G G
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA----IEVQGDQQAWFGFAGTPG 171
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y S PE+L Y PVD+W+ G I ++ P
Sbjct: 172 YLS-------------------------PEVLRKDP-YGKPVDMWACGVILYILLVGYPP 205
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D + L++ K+ +PS E TV P DL
Sbjct: 206 F-WDEDQHRLYQ--------------------QIKAGAYDFPSPEWDTVT----PEAKDL 240
Query: 293 LSKMLCMDPSRRITARSALEHEYF 316
++KML ++P++RITA AL+H +
Sbjct: 241 INKMLTINPAKRITASEALKHPWI 264
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 147/359 (40%), Gaps = 76/359 (21%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLK---- 56
MD+YE IG+G++G V KA + V E +A+K I+ ++ +R + L+
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
EM++ IV L+ L LVFE L +L + + L + F Q+ +
Sbjct: 113 EMKY-YIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 117 YCHSHR--VLHRDLKPQN-LLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + ++H DLKP+N LL + + A+K+ DFG + G +
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRI---------------- 215
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ + + +YR+PE+LLG Y +D+WS+GCI EM PLF
Sbjct: 216 ----------------YQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLF 258
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFP--KWPSKELGTVVRNLEPAGI- 290
G +E+D++ KI VLG P F P W K+ R +P G
Sbjct: 259 SGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTR 318
Query: 291 --------------------------------DLLSKMLCMDPSRRITARSALEHEYFR 317
DL+ +ML DP RI AL+H +F+
Sbjct: 319 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 72/323 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D+Y+ E IG+G + VV + T A K I ++ RE + + ++H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 62 NIVRLQDVVHSEKKLYLVFE-------YLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NIVRL D + E YLVF+ + D+ +++ A+ I+ QIL
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----ADASHCIQ----QILEA 115
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
+ +CH V+HRDLKP+NLL+ + A+KLADFGLA I V+ +G G
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA----IEVQGDQQAWFGFAGTPG 171
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y S PE+L Y PVD+W+ G I ++ P
Sbjct: 172 YLS-------------------------PEVLR-KEAYGKPVDIWACGVILYILLVGYPP 205
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D + +L++ K+ +PS E TV P +L
Sbjct: 206 F-WDEDQHKLYQ--------------------QIKAGAYDFPSPEWDTVT----PEAKNL 240
Query: 293 LSKMLCMDPSRRITARSALEHEY 315
+++ML ++P++RITA AL+H +
Sbjct: 241 INQMLTINPAKRITAHEALKHPW 263
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 148/328 (45%), Gaps = 70/328 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAI-REISLLKEM 58
D YE E IG+G + VV + N T + A+K + + + G+ + + RE S+ +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLD-----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+H +IV L + S+ LY+VFE++D ++ K D+ F + ++ QIL
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQILE 141
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
+ YCH + ++HRD+KP+N+L+ + N+ +KL DFG+A G +G+
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG------------ESGL- 188
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+AG +V T + APE++ Y PVDVW G I +++
Sbjct: 189 ----------VAGG------RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCL 231
Query: 232 LFPGDSEIDELFK-IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F G E LF+ I + N W ++ +
Sbjct: 232 PFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-------------------------SAK 264
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFRD 318
DL+ +ML +DP+ RIT AL H + ++
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 140/319 (43%), Gaps = 66/319 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQ 59
+D ++ +G+G +G VY AR +ALK + Q E EGV REI + ++
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+R+ + H K++YL+ E+ +L K + F D + TF+ ++ + YC
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF--DEQRSATFMEELADALHYC 130
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H +V+HRD+KP+NLL+ + LK+ADFG W S++ LR
Sbjct: 131 HERKVIHRDIKPENLLMGYK-GELKIADFG----------------W-----SVHAPSLR 168
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
R + G TL Y PE++ G H VD+W G + E + P F S
Sbjct: 169 RRXMCG----------TLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I V D K FP + L DL+SK+L
Sbjct: 218 TETHRRIVNV----------------DLK--FPPF-----------LSDGSKDLISKLLR 248
Query: 299 MDPSRRITARSALEHEYFR 317
P +R+ + +EH + +
Sbjct: 249 YHPPQRLPLKGVMEHPWVK 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 140/319 (43%), Gaps = 66/319 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQ 59
+D ++ +G+G +G VY AR +ALK + Q E EGV REI + ++
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+R+ + H K++YL+ E+ +L K + F D + TF+ ++ + YC
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF--DEQRSATFMEELADALHYC 131
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H +V+HRD+KP+NLL+ + LK+ADFG W S++ LR
Sbjct: 132 HERKVIHRDIKPENLLMGYK-GELKIADFG----------------W-----SVHAPSLR 169
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
R + G TL Y PE++ G H VD+W G + E + P F S
Sbjct: 170 RRXMCG----------TLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSH 218
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I V D K FP + L DL+SK+L
Sbjct: 219 TETHRRIVNV----------------DLK--FPPF-----------LSDGSKDLISKLLR 249
Query: 299 MDPSRRITARSALEHEYFR 317
P +R+ + +EH + +
Sbjct: 250 YHPPQRLPLKGVMEHPWVK 268
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 66/310 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
+G+G +G VY AR + +ALK + + + E GV RE+ + ++H NI+RL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 69 VVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
H ++YL+ EY L + + + F D + T++ ++ ++YCHS RV+HRD
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRF--DEQRTATYITELANALSYCHSKRVIHRD 137
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
+KP+NLL+ LK+ADFG W S++ R L G
Sbjct: 138 IKPENLLLG-SNGELKIADFG----------------W-----SVHAPSSRRTTLCG--- 172
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFR 247
TL Y PE++ G R + VD+WS+G + E + P F + + +I R
Sbjct: 173 -------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 248 VLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITA 307
V T PDF + DL+S++L + S+R+T
Sbjct: 225 VEFT-----------FPDF------------------VTEGARDLISRLLKHNASQRLTL 255
Query: 308 RSALEHEYFR 317
LEH + +
Sbjct: 256 AEVLEHPWIK 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 66/310 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
+G+G +G VY AR + +ALK + + + E GV RE+ + ++H NI+RL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 69 VVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
H ++YL+ EY L + + + F D + T++ ++ ++YCHS RV+HRD
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRF--DEQRTATYITELANALSYCHSKRVIHRD 137
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
+KP+NLL+ LK+ADFG W S++ R L G
Sbjct: 138 IKPENLLLG-SNGELKIADFG----------------W-----SVHAPSSRRDTLCG--- 172
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFR 247
TL Y PE++ G R + VD+WS+G + E + P F + + +I R
Sbjct: 173 -------TLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 248 VLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITA 307
V T PDF + DL+S++L + S+R+T
Sbjct: 225 VEFT-----------FPDF------------------VTEGARDLISRLLKHNASQRLTL 255
Query: 308 RSALEHEYFR 317
LEH + +
Sbjct: 256 AEVLEHPWIK 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 136/320 (42%), Gaps = 73/320 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ E++G+G + VV + + T A K I ++ RE + +++QH
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIVRL D + E YLVF E + + + S D ++ + QIL I
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-------CIQQILESI 118
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHW-GSTGISI 172
AYCHS+ ++HR+LKP+NLL+ + A+KLADFGLA + E W G G
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEAWHGFAGTPG 172
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y S PE+ L YS PVD+W+ G I ++ P
Sbjct: 173 YLS-------------------------PEV-LKKDPYSKPVDIWACGVILYILLVGYPP 206
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D + L+ K+ +PS E TV P L
Sbjct: 207 F-WDEDQHRLY--------------------AQIKAGAYDYPSPEWDTVT----PEAKSL 241
Query: 293 LSKMLCMDPSRRITARSALE 312
+ ML ++P +RITA AL+
Sbjct: 242 IDSMLTVNPKKRITADQALK 261
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 147/321 (45%), Gaps = 68/321 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
D+YE V+ IG G +GV R+ +NE +A+K I R E+ DE V REI + ++H
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSLRH 73
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIVR ++V+ + L +V EY +L + + + F+ D + F Q++ G++YCH
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE--ARFFFQQLISGVSYCH 131
Query: 120 SHRVLHRDLKPQNLLIDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
+ +V HRDLK +N L+D LK+ DFG +++ + H ST
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS------SVLHSQPKST---------- 175
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPGDS 237
V T Y APE+LL + DVWS G ++ +V P D
Sbjct: 176 --------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDP 219
Query: 238 EIDELFK--IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
E + F+ I R+L ++PD+ ++ P L+S+
Sbjct: 220 EEPKNFRKTIHRILNVQ--------YAIPDYV----------------HISPECRHLISR 255
Query: 296 MLCMDPSRRITARSALEHEYF 316
+ DP++RI+ HE+F
Sbjct: 256 IFVADPAKRISIPEIRNHEWF 276
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 136/320 (42%), Gaps = 73/320 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ E++G+G + VV + + T A K I ++ RE + +++QH
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIVRL D + E YLVF E + + + S D ++ + QIL I
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-------CIQQILESI 117
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHW-GSTGISI 172
AYCHS+ ++HR+LKP+NLL+ + A+KLADFGLA + E W G G
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEAWHGFAGTPG 171
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y S PE+ L YS PVD+W+ G I ++ P
Sbjct: 172 YLS-------------------------PEV-LKKDPYSKPVDIWACGVILYILLVGYPP 205
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D + L+ K+ +PS E TV P L
Sbjct: 206 F-WDEDQHRLY--------------------AQIKAGAYDYPSPEWDTVT----PEAKSL 240
Query: 293 LSKMLCMDPSRRITARSALE 312
+ ML ++P +RITA AL+
Sbjct: 241 IDSMLTVNPKKRITADQALK 260
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 136/320 (42%), Gaps = 73/320 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ E++G+G + VV + + T A K I ++ RE + +++QH
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIVRL D + E YLVF E + + + S D ++ + QIL I
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-------CIQQILESI 118
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHW-GSTGISI 172
AYCHS+ ++HR+LKP+NLL+ + A+KLADFGLA + E W G G
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEAWHGFAGTPG 172
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y S PE+ L YS PVD+W+ G I ++ P
Sbjct: 173 YLS-------------------------PEV-LKKDPYSKPVDIWACGVILYILLVGYPP 206
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D + L+ K+ +PS E TV P L
Sbjct: 207 F-WDEDQHRLY--------------------AQIKAGAYDYPSPEWDTVT----PEAKSL 241
Query: 293 LSKMLCMDPSRRITARSALE 312
+ ML ++P +RITA AL+
Sbjct: 242 IDSMLTVNPKKRITADQALK 261
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 136/320 (42%), Gaps = 73/320 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ E++G+G + VV + + T A K I ++ RE + +++QH
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIVRL D + E YLVF E + + + S D ++ + QIL I
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-------CIQQILESI 141
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHW-GSTGISI 172
AYCHS+ ++HR+LKP+NLL+ + A+KLADFGLA + E W G G
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEAWHGFAGTPG 195
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y S PE+ L YS PVD+W+ G I ++ P
Sbjct: 196 YLS-------------------------PEV-LKKDPYSKPVDIWACGVILYILLVGYPP 229
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D + L+ K+ +PS E TV P L
Sbjct: 230 F-WDEDQHRLY--------------------AQIKAGAYDYPSPEWDTVT----PEAKSL 264
Query: 293 LSKMLCMDPSRRITARSALE 312
+ ML ++P +RITA AL+
Sbjct: 265 IDSMLTVNPKKRITADQALK 284
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 145/320 (45%), Gaps = 66/320 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D+YE V+ IG G +GV R+ +NE +A+K I + E + + REI + ++H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIAANVKREIINHRSLRHP 75
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIVR ++V+ + L +V EY +L + + + F+ D + F Q++ G++YCH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE--ARFFFQQLISGVSYCHA 133
Query: 121 HRVLHRDLKPQNLLIDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+V HRDLK +N L+D LK+ DFG +++ + H ST
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS------SVLHSQPKST----------- 176
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPGDSE 238
V T Y APE+LL + DVWS G ++ +V P D E
Sbjct: 177 -------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPE 221
Query: 239 IDELFK--IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKM 296
+ F+ I R+L ++PD+ ++ P L+S++
Sbjct: 222 EPKNFRKTIHRILNVQ--------YAIPDYV----------------HISPECRHLISRI 257
Query: 297 LCMDPSRRITARSALEHEYF 316
DP++RI+ HE+F
Sbjct: 258 FVADPAKRISIPEIRNHEWF 277
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 139/322 (43%), Gaps = 72/322 (22%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
Y+ E++G+G + VV + + + A K I ++ RE + + ++H NI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 64 VRLQDVVHSEKKLYLVFE-------YLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
VRL D + E YL+F+ + D+ +++ A+ I+ QIL +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE----ADASHCIQ----QILEAVL 135
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+CH V+HRDLKP+NLL+ + A+KLADFGLA I V +G G Y
Sbjct: 136 HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA----IEVEGEQQAWFGFAGTPGYL 191
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
S PE+L Y PVD+W+ G I ++ P F
Sbjct: 192 S-------------------------PEVLRKDP-YGKPVDLWACGVILYILLVGYPPF- 224
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
D + L++ K+ +PS E TV P DL++
Sbjct: 225 WDEDQHRLYQ--------------------QIKAGAYDFPSPEWDTVT----PEAKDLIN 260
Query: 295 KMLCMDPSRRITARSALEHEYF 316
KML ++PS+RITA AL+H +
Sbjct: 261 KMLTINPSKRITAAEALKHPWI 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 65/317 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAI-REISLLKEMQH 60
D+Y++V+K+G G YG V ++ +T A+K I+ S A+ E+++LK++ H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 61 GNIVRLQDVVHSEKKLYLVFE-YLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYC 118
NI++L + ++ YLV E Y +L + F+ D +I + Q+L G Y
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLSGTTYL 137
Query: 119 HSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H H ++HRDLKP+NLL++ ++ +K+ DFGL+ F + + E G
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLG---------- 185
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
T +Y APE+L + Y DVWS G I ++ P F G
Sbjct: 186 ------------------TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQ 225
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKM 296
++ + L ++ + F P W + L+ M
Sbjct: 226 TDQEILKRVEK----------------GKFSFDPPDWT---------QVSDEAKQLVKLM 260
Query: 297 LCMDPSRRITARSALEH 313
L +PS+RI+A AL H
Sbjct: 261 LTYEPSKRISAEEALNH 277
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 65/317 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAI-REISLLKEMQH 60
D+Y++V+K+G G YG V ++ +T A+K I+ S A+ E+++LK++ H
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFE-YLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYC 118
NI++L + ++ YLV E Y +L + F+ D +I + Q+L G Y
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLSGTTYL 120
Query: 119 HSHRVLHRDLKPQNLLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H H ++HRDLKP+NLL++ ++ +K+ DFGL+ F + + E G
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLG---------- 168
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
T +Y APE+L + Y DVWS G I ++ P F G
Sbjct: 169 ------------------TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQ 208
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKM 296
++ + L ++ + F P W + L+ M
Sbjct: 209 TDQEILKRVEK----------------GKFSFDPPDWT---------QVSDEAKQLVKLM 243
Query: 297 LCMDPSRRITARSALEH 313
L +PS+RI+A AL H
Sbjct: 244 LTYEPSKRISAEEALNH 260
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 145/321 (45%), Gaps = 68/321 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
D+YE V+ IG G +GV R+ NE +A+K I R E+ DE V REI + ++H
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK----REIINHRSLRH 74
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIVR ++V+ + L +V EY +L + + + F+ D + F Q++ G++Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE--ARFFFQQLISGVSYAH 132
Query: 120 SHRVLHRDLKPQNLLIDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
+ +V HRDLK +N L+D LK+ADFG ++A + H S
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA------SVLHSQPKSA---------- 176
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPGDS 237
V T Y APE+LL + DVWS G ++ +V P D
Sbjct: 177 --------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDP 220
Query: 238 EIDELFK--IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
E + F+ I R+L ++PD+ ++ P L+S+
Sbjct: 221 EEPKNFRKTIHRILNVQ--------YAIPDYV----------------HISPECRHLISR 256
Query: 296 MLCMDPSRRITARSALEHEYF 316
+ DP++RI+ HE+F
Sbjct: 257 IFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 68/321 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
D+YE V+ IG G +GV R+ +NE +A+K I R E+ DE V REI + ++H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSLRH 74
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIVR ++V+ + L +V EY +L + + + F+ D + F Q++ G++YCH
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE--ARFFFQQLISGVSYCH 132
Query: 120 SHRVLHRDLKPQNLLIDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
+ +V HRDLK +N L+D LK+ FG +++ + H ST
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS------SVLHSQPKST---------- 176
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPGDS 237
V T Y APE+LL + DVWS G ++ +V P D
Sbjct: 177 --------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDP 220
Query: 238 EIDELFK--IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
E + F+ I R+L ++PD+ ++ P L+S+
Sbjct: 221 EEPKNFRKTIHRILNVQ--------YAIPDYV----------------HISPECRHLISR 256
Query: 296 MLCMDPSRRITARSALEHEYF 316
+ DP++RI+ HE+F
Sbjct: 257 IFVADPAKRISIPEIRNHEWF 277
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 127/277 (45%), Gaps = 43/277 (15%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE-QEDEGVPSTAIREISLLKEMQH 60
++Y+ V+K+G G VY A + + N +A+K I + +E E RE+ ++ H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIV + DV + YLV EY++ L ++++S + D + F QIL GI + H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI--NFTNQILDGIKHAH 128
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
R++HRD+KPQN+LID LK+ DFG+A+A T T+ G
Sbjct: 129 DMRIVHRDIKPQNILIDSN-KTLKIFDFGIAKALSETSLTQTNHVLG------------- 174
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
T+ Y +PE G D++S+G + EM+ P F G++ +
Sbjct: 175 ---------------TVQYFSPEQAKGEA-TDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSK 276
K +D+ P VT+ D + P+ S
Sbjct: 219 SIAIKHI-------QDSVPNVTT--DVRKDIPQSLSN 246
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 140/322 (43%), Gaps = 70/322 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ E++G+G + VV + + A K I ++ RE + + ++H
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIVRL D + E YLVF E + + + S D ++ ++QIL +
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH-------CIHQILESV 143
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ H H ++HRDLKP+NLL+ + A+KLADFGLA I V+ +G G Y
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA----IEVQGEQQAWFGFAGTPGY 199
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
S PE+L Y PVD+W+ G I ++ P F
Sbjct: 200 LS-------------------------PEVLRKDP-YGKPVDIWACGVILYILLVGYPPF 233
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
D + +L++ K+ +PS E TV P +L+
Sbjct: 234 -WDEDQHKLYQ--------------------QIKAGAYDFPSPEWDTVT----PEAKNLI 268
Query: 294 SKMLCMDPSRRITARSALEHEY 315
++ML ++P++RITA AL+H +
Sbjct: 269 NQMLTINPAKRITADQALKHPW 290
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 140/324 (43%), Gaps = 72/324 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y+ E++G+G + VV + + + A I ++ RE + + ++H
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 62 NIVRLQDVVHSEKKLYLVFE-------YLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
NIVRL D + E YL+F+ + D+ +++ A+ I+ QIL
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE----ADASHCIQ----QILEA 122
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
+ +CH V+HR+LKP+NLL+ + A+KLADFGLA I V +G G
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA----IEVEGEQQAWFGFAGTPG 178
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y S PE+L Y PVD+W+ G I ++ P
Sbjct: 179 YLS-------------------------PEVLRKDP-YGKPVDLWACGVILYILLVGYPP 212
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D + L++ K+ +PS E TV P DL
Sbjct: 213 F-WDEDQHRLYQ--------------------QIKAGAYDFPSPEWDTVT----PEAKDL 247
Query: 293 LSKMLCMDPSRRITARSALEHEYF 316
++KML ++PS+RITA AL+H +
Sbjct: 248 INKMLTINPSKRITAAEALKHPWI 271
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRE-------------------- 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 123 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 161
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 162 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPS 212
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D + + + K+ W + ++ A + LL K+L
Sbjct: 213 DSCQE---------------YSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 248
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 249 NPSARIT 255
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPS 211
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D + + + K+ W + ++ A + LL K+L
Sbjct: 212 DSCQE---------------YSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F R
Sbjct: 123 GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRE-------------------- 161
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 162 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 211
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 212 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 248
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 249 NPSARIT 255
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 108/237 (45%), Gaps = 36/237 (15%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
Y ++ IG+G + V AR+ +T + +A+K I Q + RE+ ++K + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
IV+L +V+ +EK LYLV EY + + F QI+ + YCH
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF-RQIVSAVQYCHQKF 126
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLAR--AFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
++HRDLK +NLL+D N +K+ADFG + FG + TF GS
Sbjct: 127 IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFC----GSPP----------- 170
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 171 -----------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRE-------------------- 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRE-------------------- 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 123 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 161
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 162 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 211
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 212 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 248
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 249 NPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 123 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 161
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 162 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 211
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 212 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 248
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 249 NPSARIT 255
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 123 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 161
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 162 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 211
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 212 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 248
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 249 NPSARIT 255
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRE-------------------- 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 34/238 (14%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ Y ++ IG+G + V AR+ +T +A+K I Q + RE+ ++K + H
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCH 119
NIV+L +V+ +EK LYL+ EY + D + ++ QI+ + YCH
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
R++HRDLK +NLL+D N +K+ADFG + F + + T
Sbjct: 129 QKRIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDT------------------ 169
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
GS Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 170 --FCGS----------PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 62
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F R
Sbjct: 121 GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRE-------------------- 159
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 160 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 209
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 210 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 246
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 247 NPSARIT 253
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 123 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 161
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 162 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 211
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 212 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 248
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 249 NPSARIT 255
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 133/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRE-------------------- 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 123 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 161
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 162 RLLNKM-------XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 211
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 212 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 248
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 249 NPSARIT 255
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 68/321 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
D+YE V+ IG G +GV R+ +NE +A+K I R E+ DE V REI + ++H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSLRH 74
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIVR ++V+ + L +V EY +L + + + F+ D + F Q++ G++YCH
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE--ARFFFQQLISGVSYCH 132
Query: 120 SHRVLHRDLKPQNLLIDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
+ +V HRDLK +N L+D LK+ FG +++ + H T
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS------SVLHSQPKDT---------- 176
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPGDS 237
V T Y APE+LL + DVWS G ++ +V P D
Sbjct: 177 --------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDP 220
Query: 238 EIDELFK--IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
E + F+ I R+L ++PD+ ++ P L+S+
Sbjct: 221 EEPKNFRKTIHRILNVQ--------YAIPDYV----------------HISPECRHLISR 256
Query: 296 MLCMDPSRRITARSALEHEYF 316
+ DP++RI+ HE+F
Sbjct: 257 IFVADPAKRISIPEIRNHEWF 277
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F + + R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLATVF-----RYNN---------------RE 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSXQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 70/328 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAI-REISLLKEM 58
D YE E IG+G + VV + N T + A+K + + + G+ + + RE S+ +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLD-----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+H +IV L + S+ LY+VFE++D ++ K D+ F + ++ QIL
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQILE 141
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
+ YCH + ++HRD+KP +L+ + N+ +KL FG+A G +G+
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG------------ESGL- 188
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+AG +V T + APE++ Y PVDVW G I +++
Sbjct: 189 ----------VAGG------RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCL 231
Query: 232 LFPGDSEIDELFK-IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F G E LF+ I + N W ++ +
Sbjct: 232 PFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-------------------------SAK 264
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFRD 318
DL+ +ML +DP+ RIT AL H + ++
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 70/328 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAI-REISLLKEM 58
D YE E IG+G + VV + N T + A+K + + + G+ + + RE S+ +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLD-----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+H +IV L + S+ LY+VFE++D ++ K D+ F + ++ QIL
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQILE 143
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
+ YCH + ++HRD+KP +L+ + N+ +KL FG+A G +G+
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG------------ESGL- 190
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+AG +V T + APE++ Y PVDVW G I +++
Sbjct: 191 ----------VAGG------RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCL 233
Query: 232 LFPGDSEIDELFK-IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F G E LF+ I + N W ++ +
Sbjct: 234 PFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-------------------------SAK 266
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFRD 318
DL+ +ML +DP+ RIT AL H + ++
Sbjct: 267 DLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 34/238 (14%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ Y ++ IG+G + V AR+ +T +A+K I Q + RE+ ++K + H
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCH 119
NIV+L +V+ +EK LYL+ EY + D + ++ QI+ + YCH
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
R++HRDLK +NLL+D N +K+ADFG + F +
Sbjct: 132 QKRIVHRDLKAENLLLDADMN-IKIADFGFSNEFTV------------------------ 166
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
G + F Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 167 ----GGKLDAFCGAPP--YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 66/313 (21%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+ +G GT+G V + +T +A+K + R + V REI LK +H +I++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 67 QDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
V+ + ++V EY+ +L ++ C + + QIL + YCH H V+H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134
Query: 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGS 185
RDLKP+N+L+D NA K+ADFGL+ S G FLR + +
Sbjct: 135 RDLKPENVLLDAHMNA-KIADFGLSNMM-------------SDG-----EFLRTSCGSPN 175
Query: 186 LILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCI-FAEMVNQRPLFPGDSEIDELFK 244
Y APE++ G + VD+WS G I +A + P D + LFK
Sbjct: 176 ------------YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF--DDEHVPTLFK 221
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
R GV +P++ L + LL ML +DP +R
Sbjct: 222 KIR----------GGVFYIPEY------------------LNRSVATLLMHMLQVDPLKR 253
Query: 305 ITARSALEHEYFR 317
T + EHE+F+
Sbjct: 254 ATIKDIREHEWFK 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 38/240 (15%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ Y ++ IG+G + V AR+ +T + +A+K I Q + RE+ ++K + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIV+L +V+ +EK LYLV EY ++ ++ + K QI+ + YCH
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR--AFGIPVRTFTHEHWGSTGISIYFSFL 177
++HRDLK +NLL+D N +K+ADFG + FG + TF GS
Sbjct: 131 QKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFC----GSPP-------- 177
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 178 --------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 38/240 (15%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ Y ++ IG+G + V AR+ +T + +A+K I Q + RE+ ++K + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIV+L +V+ +EK LYLV EY ++ ++ + K QI+ + YCH
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR--AFGIPVRTFTHEHWGSTGISIYFSFL 177
++HRDLK +NLL+D N +K+ADFG + FG + TF GS
Sbjct: 131 QKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFC----GSPP-------- 177
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 178 --------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 34/238 (14%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ Y ++ IG+G + V AR+ +T + +A+K I Q + RE+ ++K + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIV+L +V+ +EK LYLV EY ++ ++ + K QI+ + YCH
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
++HRDLK +NLL+D N +K+ADFG + F TF ++ G
Sbjct: 131 QKFIVHRDLKAENLLLDADMN-IKIADFGFSNEF-----TFGNKLDAFCGAPP------- 177
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 178 ------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 134/313 (42%), Gaps = 66/313 (21%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+ +G GT+G V + +T +A+K + R + V REI LK +H +I++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 67 QDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
V+ + ++V EY+ +L ++ C + + QIL + YCH H V+H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134
Query: 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGS 185
RDLKP+N+L+D NA K+ADFGL+ + F + GS
Sbjct: 135 RDLKPENVLLDAHMNA-KIADFGLSNM--MSDGEFLRDSCGSPN---------------- 175
Query: 186 LILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCI-FAEMVNQRPLFPGDSEIDELFK 244
Y APE++ G + VD+WS G I +A + P D + LFK
Sbjct: 176 ------------YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF--DDEHVPTLFK 221
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
R GV +P++ L + LL ML +DP +R
Sbjct: 222 KIR----------GGVFYIPEY------------------LNRSVATLLMHMLQVDPLKR 253
Query: 305 ITARSALEHEYFR 317
T + EHE+F+
Sbjct: 254 ATIKDIREHEWFK 266
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 132/307 (42%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG YG V A N VT E +A+K + +++ + P +EI + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNH 64
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA F R
Sbjct: 123 GIGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRE-------------------- 161
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 162 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 211
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 212 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 248
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 249 NPSARIT 255
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 38/240 (15%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ Y ++ IG+G + V AR+ +T + +A++ I Q + RE+ ++K + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIV+L +V+ +EK LYLV EY ++ ++ + K QI+ + YCH
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR--AFGIPVRTFTHEHWGSTGISIYFSFL 177
++HRDLK +NLL+D N +K+ADFG + FG + TF GS
Sbjct: 131 QKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFC----GSPP-------- 177
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 178 --------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ Y ++ IG+G + V AR+ +T + +A++ I Q + RE+ ++K + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIV+L +V+ +EK LYLV EY ++ ++ + K QI+ + YCH
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
++HRDLK +NLL+D N +K+ADFG + F TF
Sbjct: 131 QKFIVHRDLKAENLLLDADMN-IKIADFGFSNEF-----TF------------------- 165
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
G+ + +F + Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 166 ----GNKLDEFCG--SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 62/318 (19%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D+Y+ V+ IG G +GV R+ +T E +A+K I + + REI + ++H
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI---ERGAAIDENVQREIINHRSLRHP 76
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NIVR ++V+ + L ++ EY +L + + + F+ D + F Q+L G++YCHS
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDE--ARFFFQQLLSGVSYCHS 134
Query: 121 HRVLHRDLKPQNLLIDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
++ HRDLK +N L+D LK+ DFG +++ + H ST
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS------SVLHSQPKST----------- 177
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPGDSE 238
V T Y APE+LL + DVWS G ++ +V P +
Sbjct: 178 -------------VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP 224
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
D I R+L S+PD +R + P L+S++
Sbjct: 225 RDYRKTIQRILSVK--------YSIPD---------------DIR-ISPECCHLISRIFV 260
Query: 299 MDPSRRITARSALEHEYF 316
DP+ RI+ H +F
Sbjct: 261 ADPATRISIPEIKTHSWF 278
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 34/258 (13%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+E++ +G+G +G V KARN + + A+KKIR +E ST + E+ LL + H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASLNHQYV 64
Query: 64 VRL-------------QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
VR V + L++ EY + + + Q
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
IL ++Y HS ++HRDLKP N+ ID N +K+ DFGLA+ +
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRN-VKIGDFGLAK---------------NVHR 168
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
S+ L + L GS + T Y A E+L G+ HY+ +D++S+G IF EM+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--Y 226
Query: 231 PLFPGDSEIDELFKIFRV 248
P G ++ L K+ V
Sbjct: 227 PFSTGMERVNILKKLRSV 244
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 67/311 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
+G+G++ VY+A + T +A+K I + G+ E+ + +++H +I+ L +
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 69 VVHSEKKLYLVFEYL-DLDLKKHMDS--CPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
+YLV E + ++ +++ + P N+ R F++QI+ G+ Y HSH +LH
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR---HFMHQIITGMLYLHSHGILH 135
Query: 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGS 185
RDL NLL+ R N +K+ADFGLA +P HE ++ L G
Sbjct: 136 RDLTLSNLLLTRNMN-IKIADFGLATQLKMP-----HE--------------KHYTLCG- 174
Query: 186 LILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKI 245
T Y +PEI S H DVWS+GC+F ++ RP F D+ + L K+
Sbjct: 175 ---------TPNYISPEIATRSAH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
Query: 246 FRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
L D++ P + S E DL+ ++L +P+ R+
Sbjct: 225 V----------------LADYE--MPSFLSIE-----------AKDLIHQLLRRNPADRL 255
Query: 306 TARSALEHEYF 316
+ S L+H +
Sbjct: 256 SLSSVLDHPFM 266
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 66/319 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQ 59
+D +E +G+G +G VY AR ++ +ALK + Q E EGV REI + +
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H NI+RL + + +++YL+ EY +L K + F D + T + ++ + YC
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF--DEQRTATIMEELADALMYC 139
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H +V+HRD+KP+NLL+ LK+ADFG W S++ LR
Sbjct: 140 HGKKVIHRDIKPENLLLG-LKGELKIADFG----------------W-----SVHAPSLR 177
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
+ + G TL Y PE++ G R ++ VD+W +G + E++ P F S
Sbjct: 178 RKTMCG----------TLDYLPPEMIEG-RMHNEKVDLWCIGVLCYELLVGNPPFESASH 226
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ +I +V D K FP ++ DL+SK+L
Sbjct: 227 NETYRRIVKV----------------DLK--FPA-----------SVPTGAQDLISKLLR 257
Query: 299 MDPSRRITARSALEHEYFR 317
+PS R+ H + R
Sbjct: 258 HNPSERLPLAQVSAHPWVR 276
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 34/258 (13%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+E++ +G+G +G V KARN + + A+KKIR +E ST + E+ LL + H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASLNHQYV 64
Query: 64 VRL-------------QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
VR V + L++ EY + + + Q
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
IL ++Y HS ++HRDLKP N+ ID N +K+ DFGLA+ +
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRN-VKIGDFGLAK---------------NVHR 168
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
S+ L + L GS + T Y A E+L G+ HY+ +D++S+G IF EM+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--Y 226
Query: 231 PLFPGDSEIDELFKIFRV 248
P G ++ L K+ V
Sbjct: 227 PFSTGMERVNILKKLRSV 244
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 108/242 (44%), Gaps = 42/242 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ Y ++ IG+G + V AR+ +T + +A+K I Q + RE+ + K + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIV+L +V+ +EK LYLV EY L H A + QI+ +
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA------RAKFRQIVSAV 126
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
YCH ++HRDLK +NLL+D N +K+ADFG + F TF ++ G
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADXN-IKIADFGFSNEF-----TFGNKLDAFCGAPP--- 177
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
Y APE+ G ++ VDVWS+G I +V+ F G
Sbjct: 178 ----------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
Query: 236 DS 237
+
Sbjct: 216 QN 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 134/307 (43%), Gaps = 58/307 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ ++ V+ +GEG G V A N VT E +A+K + +++ + P +EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
N+V+ YL EY +L ++ PD + F +Q++ G+ Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ HRD+KP+NLL+D R N LK++DFGLA +++ R
Sbjct: 122 GIGITHRDIKPENLLLDERDN-LKISDFGLA--------------------TVFRYNNRE 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
R+L TL Y APE+L ++ PVDVWS G + M+ P D
Sbjct: 161 RLLNKM-------CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQP- 210
Query: 240 DELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCM 299
D+ + + K+ W + ++ A + LL K+L
Sbjct: 211 --------------SDSCQEYSDWKEKKTYLNPW---------KKIDSAPLALLHKILVE 247
Query: 300 DPSRRIT 306
+PS RIT
Sbjct: 248 NPSARIT 254
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 61/315 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + EKIG+G G VY A + T + +A++++ L+Q+ + I EI +++E ++ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 78
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
IV D +L++V EYL D + D I + L+ + + HS++
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
V+HRD+K N+L+ ++KL DFG P ++ E G
Sbjct: 137 VIHRDIKSDNILLG-MDGSVKLTDFGFCAQI-TPEQSKRSEMVG---------------- 178
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDEL 242
T ++ APE++ + Y VD+WS+G + EM+ P + ++ + L
Sbjct: 179 ------------TPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 243 FKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPS 302
+ I P+ ++ P K L + R D L++ L MD
Sbjct: 226 YLI-------------ATNGTPELQN-----PEK-LSAIFR-------DFLNRCLDMDVE 259
Query: 303 RRITARSALEHEYFR 317
+R +A+ L+H++ +
Sbjct: 260 KRGSAKELLQHQFLK 274
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 143/327 (43%), Gaps = 68/327 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D YE E++G G + +V K R T + A +KK RL GV I RE+++L+E
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
++H NI+ L D+ ++ + L+ E + +L + D FL QIL G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--ATQFLKQILDGVH 122
Query: 117 YCHSHRVLHRDLKPQN-LLIDRR--TNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS R+ H DLKP+N +L+D+ +KL DFG+A
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----------------------- 159
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+++ AG+ +F + T + APEI + D+WS+G I +++
Sbjct: 160 -----HKIEAGN---EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASP 210
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F G+++ + L I V +E+ + + L D
Sbjct: 211 FLGETKQETLTNISAVNYDFDEEYFSNTSELAK-------------------------DF 245
Query: 293 LSKMLCMDPSRRITARSALEHEYFRDV 319
+ ++L DP RR+T +LEH + + +
Sbjct: 246 IRRLLVKDPKRRMTIAQSLEHSWIKAI 272
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 130/323 (40%), Gaps = 80/323 (24%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
YE E IG G + V A + +T E +A+K + +P EI LK ++H +I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT-EIEALKNLRHQHI 70
Query: 64 VRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD------FANDPRL----IKTFLYQILR 113
+L V+ + K+++V EY CP + RL + QI+
Sbjct: 71 CQLYHVLETANKIFMVLEY-----------CPGGELFDYIISQDRLSEEETRVVFRQIVS 119
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+AY HS HRDLKP+NLL D + LKL DFGL G Y
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFD-EYHKLKLIDFGLCAK--------------PKGNKDY 164
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
+ GSL Y APE++ G + + DVWS+G + ++ F
Sbjct: 165 ----HLQTCCGSLA----------YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
D+ + KI R K PKW L P+ I LL
Sbjct: 211 DDDNVMALYKKIMR------------------GKYDVPKW-----------LSPSSILLL 241
Query: 294 SKMLCMDPSRRITARSALEHEYF 316
+ML +DP +RI+ ++ L H +
Sbjct: 242 QQMLQVDPKKRISMKNLLNHPWI 264
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 34/236 (14%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
Y + IG+G + V AR+ +T +A+K I Q + RE+ ++K + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 63 IVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
IV+L +V+ +EK LYLV EY ++ ++ + K QI+ + YCH
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCHQK 133
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++HRDLK +NLL+D N +K+ADFG + F + + T
Sbjct: 134 YIVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDT-------------------- 172
Query: 182 LAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
GS Y APE+ G ++ VDVWS+G I +V+ F G +
Sbjct: 173 FCGS----------PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 61/315 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + EKIG+G G VY A + T + +A++++ L+Q+ + I EI +++E ++ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 78
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
IV D +L++V EYL D + D I + L+ + + HS++
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
V+HRD+K N+L+ ++KL DFG T E + +
Sbjct: 137 VIHRDIKSDNILLG-MDGSVKLTDFGFC-------AQITPEQSKRSXM------------ 176
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDEL 242
V T ++ APE++ + Y VD+WS+G + EM+ P + ++ + L
Sbjct: 177 ----------VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 243 FKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPS 302
+ I P+ ++ P K L + R D L++ L MD
Sbjct: 226 YLI-------------ATNGTPELQN-----PEK-LSAIFR-------DFLNRCLEMDVE 259
Query: 303 RRITARSALEHEYFR 317
+R +A+ L+H++ +
Sbjct: 260 KRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 61/315 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + EKIG+G G VY A + T + +A++++ L+Q+ + I EI +++E ++ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 78
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
IV D +L++V EYL D + D I + L+ + + HS++
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
V+HRD+K N+L+ ++KL DFG T E + +
Sbjct: 137 VIHRDIKSDNILLG-MDGSVKLTDFGFC-------AQITPEQSKRSTM------------ 176
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDEL 242
V T ++ APE++ + Y VD+WS+G + EM+ P + ++ + L
Sbjct: 177 ----------VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 243 FKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPS 302
+ I P+ ++ P K L + R D L++ L MD
Sbjct: 226 YLI-------------ATNGTPELQN-----PEK-LSAIFR-------DFLNRCLDMDVE 259
Query: 303 RRITARSALEHEYFR 317
+R +A+ L+H++ +
Sbjct: 260 KRGSAKELLQHQFLK 274
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 145/323 (44%), Gaps = 66/323 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE--QEDEGVPSTAIREISLLKEM 58
++ +E + +G+G++G V+ A TN+ A+K ++ + D+ V T + + L
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
+H + + +++ L+ V EYL+ DL H+ SC F D + +I+ G+ +
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF--DLSRATFYAAEIILGLQF 134
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
HS +++RDLK N+L+D + +K+ADFG+ + + T+E G+
Sbjct: 135 LHSKGIVYRDLKLDNILLD-KDGHIKIADFGMCKE-NMLGDAKTNEFCGTPD-------- 184
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
Y APEILLG + Y+ VD WS G + EM+ + F G
Sbjct: 185 --------------------YIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
E +ELF R + P +P+W LE DLL K+
Sbjct: 224 E-EELFHSIR-MDNP----------------FYPRW-----------LEKEAKDLLVKLF 254
Query: 298 CMDPSRRITARSAL-EHEYFRDV 319
+P +R+ R + +H FR++
Sbjct: 255 VREPEKRLGVRGDIRQHPLFREI 277
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 68/325 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D YE E++G G + +V K R T + A +KK RL GV I RE+++L+E
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
++H NI+ L D+ ++ + L+ E + +L + D FL QIL G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--ATQFLKQILDGVH 129
Query: 117 YCHSHRVLHRDLKPQN-LLIDRR--TNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS R+ H DLKP+N +L+D+ +KL DFG+A
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----------------------- 166
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+++ AG+ +F + T + APEI + D+WS+G I +++
Sbjct: 167 -----HKIEAGN---EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F G+++ + L I V +E+ + + L D
Sbjct: 218 FLGETKQETLTNISAVNYDFDEEYFSNTSELAK-------------------------DF 252
Query: 293 LSKMLCMDPSRRITARSALEHEYFR 317
+ ++L DP RR+ +LEH + +
Sbjct: 253 IRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 61/315 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + EKIG+G G VY A + T + +A++++ L+Q+ + I EI +++E ++ N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 79
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
IV D +L++V EYL D + D I + L+ + + HS++
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
V+HRD+K N+L+ ++KL DFG T E + +
Sbjct: 138 VIHRDIKSDNILLG-MDGSVKLTDFGFC-------AQITPEQSKRSXM------------ 177
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDEL 242
V T ++ APE++ + Y VD+WS+G + EM+ P + ++ + L
Sbjct: 178 ----------VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 243 FKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPS 302
+ I P+ ++ P K L + R D L++ L MD
Sbjct: 227 YLI-------------ATNGTPELQN-----PEK-LSAIFR-------DFLNRCLEMDVE 260
Query: 303 RRITARSALEHEYFR 317
+R +A+ ++H++ +
Sbjct: 261 KRGSAKELIQHQFLK 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 68/327 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D YE E++G G + +V K R T + A +KK RL GV I RE+++L+E
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
++H NI+ L D+ ++ + L+ E + +L + D FL QIL G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE--ATQFLKQILDGVH 143
Query: 117 YCHSHRVLHRDLKPQN-LLIDRR--TNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS R+ H DLKP+N +L+D+ +KL DFG+A
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----------------------- 180
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+++ AG+ +F + T + APEI + D+WS+G I +++
Sbjct: 181 -----HKIEAGN---EFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASP 231
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F G+++ + L I V +E+ + + L D
Sbjct: 232 FLGETKQETLTNISAVNYDFDEEYFSNTSELAK-------------------------DF 266
Query: 293 LSKMLCMDPSRRITARSALEHEYFRDV 319
+ ++L DP RR+ +LEH + + +
Sbjct: 267 IRRLLVKDPKRRMXIAQSLEHSWIKAI 293
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 32/246 (13%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M++Y +++KIGEG++G ++ +K+I + + + RE+++L M+H
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
NIV+ ++ LY+V +Y + DL K +++ I + QI + + H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
++LHRD+K QN+ + + ++L DFG+AR
Sbjct: 143 DRKILHRDIKSQNIFLTK-DGTVQLGDFGIAR---------------------------- 173
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEI 239
VL ++ L + T +Y +PEI ++ Y+ D+W++GC+ E+ + F S
Sbjct: 174 -VLNSTVELARACIGTPYYLSPEIC-ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK 231
Query: 240 DELFKI 245
+ + KI
Sbjct: 232 NLVLKI 237
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 103/241 (42%), Gaps = 62/241 (25%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
+G+GTYG+VY R+ IA+K+I + D EI+L K ++H NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 70 VHSEKKLYLVFEYLDLDLKKHMDSCPD-------------FANDPRLIKTFLYQILRGIA 116
SE +F M+ P ++ + I + QIL G+
Sbjct: 88 F-SENGFIKIF----------MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 136
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA-RAFGIP--VRTFTHEHWGSTGISIY 173
Y H ++++HRD+K N+LI+ + LK++DFG + R GI TFT
Sbjct: 137 YLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG----------- 185
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEIL-LGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
TL Y APEI+ G R Y D+WS+GC EM +P
Sbjct: 186 ---------------------TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
Query: 233 F 233
F
Sbjct: 225 F 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 46/233 (19%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
+G+GTYG+VY R+ IA+K+I + D EI+L K ++H NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 70 VHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + E L L+ D + + I + QIL G+ Y H ++++
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKD---NEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLA-RAFGIP--VRTFTHEHWGSTGISIYFSFLRYRV 181
HRD+K N+LI+ + LK++DFG + R GI TFT
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG------------------- 171
Query: 182 LAGSLILQFLKVVTLWYRAPEIL-LGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
TL Y APEI+ G R Y D+WS+GC EM +P F
Sbjct: 172 -------------TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 61/315 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + EKIG+G G VY A + T + +A++++ L+Q+ + I EI +++E ++ N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 79
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
IV D +L++V EYL D + D I + L+ + + HS++
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
V+HR++K N+L+ ++KL DFG T E + +
Sbjct: 138 VIHRNIKSDNILLG-MDGSVKLTDFGFC-------AQITPEQSKRSTM------------ 177
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDEL 242
V T ++ APE++ + Y VD+WS+G + EM+ P + ++ + L
Sbjct: 178 ----------VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 243 FKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPS 302
+ I P+ ++ P K L + R D L++ L MD
Sbjct: 227 YLI-------------ATNGTPELQN-----PEK-LSAIFR-------DFLNRCLEMDVE 260
Query: 303 RRITARSALEHEYFR 317
+R +A+ ++H++ +
Sbjct: 261 KRGSAKELIQHQFLK 275
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 115/258 (44%), Gaps = 34/258 (13%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+E++ +G+G +G V KARN + + A+KKIR +E ST + E+ LL + H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVXLLASLNHQYV 64
Query: 64 VRL-------------QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
VR V + L++ EY + + + Q
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
IL ++Y HS ++HR+LKP N+ ID N +K+ DFGLA+ +
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRN-VKIGDFGLAK---------------NVHR 168
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
S+ L + L GS + T Y A E+L G+ HY+ +D +S+G IF E +
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--Y 226
Query: 231 PLFPGDSEIDELFKIFRV 248
P G ++ L K+ V
Sbjct: 227 PFSTGXERVNILKKLRSV 244
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 137/335 (40%), Gaps = 95/335 (28%)
Query: 1 MDQYEKVEK-IGEGTYGVVYKARNCVTNETIALKK-IRLEQEDEGVPSTAI-------RE 51
++QY +E IG G++G V IA++K R+ + + +P + +E
Sbjct: 24 INQYYTLENTIGRGSWGEV----------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQE 73
Query: 52 ISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLIK 105
I ++K + H NI+RL + +YLV E + + K + D A R++K
Sbjct: 74 IEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA---RIMK 130
Query: 106 TFLYQILRGIAYCHSHRVLHRDLKPQNLLI--DRRTNALKLADFGLARAF--GIPVRTFT 161
+L +AYCH V HRDLKP+N L D + LKL DFGLA F G +RT
Sbjct: 131 ----DVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-- 184
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
KV T +Y +P++L G Y D WS G
Sbjct: 185 ------------------------------KVGTPYYVSPQVLEG--LYGPECDEWSAGV 212
Query: 222 IFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTV 281
+ ++ P F ++ + + KI T E W
Sbjct: 213 MMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW------------------------ 248
Query: 282 VRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
N+ P L+ ++L P +RIT+ ALEHE+F
Sbjct: 249 -LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 137/335 (40%), Gaps = 95/335 (28%)
Query: 1 MDQYEKVEK-IGEGTYGVVYKARNCVTNETIALKK-IRLEQEDEGVPSTAI-------RE 51
++QY +E IG G++G V IA++K R+ + + +P + +E
Sbjct: 7 INQYYTLENTIGRGSWGEV----------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQE 56
Query: 52 ISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLIK 105
I ++K + H NI+RL + +YLV E + + K + D A R++K
Sbjct: 57 IEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA---RIMK 113
Query: 106 TFLYQILRGIAYCHSHRVLHRDLKPQNLLI--DRRTNALKLADFGLARAF--GIPVRTFT 161
+L +AYCH V HRDLKP+N L D + LKL DFGLA F G +RT
Sbjct: 114 ----DVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-- 167
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
KV T +Y +P++L G Y D WS G
Sbjct: 168 ------------------------------KVGTPYYVSPQVLEG--LYGPECDEWSAGV 195
Query: 222 IFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTV 281
+ ++ P F ++ + + KI T E W
Sbjct: 196 MMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW------------------------ 231
Query: 282 VRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
N+ P L+ ++L P +RIT+ ALEHE+F
Sbjct: 232 -LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 66/314 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLE--QEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+G+G++G V+ A TN+ A+K ++ + D+ V T + + L +H + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 68 DVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
+++ L+ V EYL+ DL H+ SC F D + +I+ G+ + HS +++R
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKF--DLSRATFYAAEIILGLQFLHSKGIVYR 142
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+L+D+ + +K+ADFG+ + G + +
Sbjct: 143 DLKLDNILLDKDGH-IKIADFGMCK----------ENMLGDAKTNXFCG----------- 180
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y APEILLG + Y+ VD WS G + EM+ + F G E +ELF
Sbjct: 181 --------TPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSI 230
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRIT 306
R + P +P+W LE DLL K+ +P +R+
Sbjct: 231 R-MDNP----------------FYPRW-----------LEKEAKDLLVKLFVREPEKRLG 262
Query: 307 ARSAL-EHEYFRDV 319
R + +H FR++
Sbjct: 263 VRGDIRQHPLFREI 276
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 142/316 (44%), Gaps = 68/316 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGV-----PSTAIREISLLKEMQHGNIV 64
+GEG+YG K + + +ET+ + +++ ++ + + +EI LL+ ++H N++
Sbjct: 13 LGEGSYG---KVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 65 RLQDVVHSE--KKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
+L DV+++E +K+Y+V EY +++ +DS P+ + Q++ G+ Y HS
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG 129
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
++H+D+KP NLL+ LK++ G+A A + F + R
Sbjct: 130 IVHKDIKPGNLLL-TTGGTLKISALGVAEA----LHPFAADD-------------TCRTS 171
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYST-PVDVWSVGCIFAEMVNQRPLFPGDSEIDE 241
GS Q PEI G +S VD+WS G + L+P E D
Sbjct: 172 QGSPAFQ----------PPEIANGLDTFSGFKVDIWSAGVTLYNITTG--LYP--FEGDN 217
Query: 242 LFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDP 301
++K+F +G G ++P + P DLL ML +P
Sbjct: 218 IYKLFENIGK-------GSYAIPG------------------DCGPPLSDLLKGMLEYEP 252
Query: 302 SRRITARSALEHEYFR 317
++R + R +H +FR
Sbjct: 253 AKRFSIRQIRQHSWFR 268
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 41/236 (17%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRL-EQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+KIG G + VY+A + +ALKK+++ + D + I+EI LLK++ H N+++
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97
Query: 67 QDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIK-----TFLYQILRGIAYCHS 120
+ +L +V E D DL + + F RLI + Q+ + + HS
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKH---FKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
RV+HRD+KP N+ I T +KL D GL R F T H G
Sbjct: 155 RRVMHRDIKPANVFI-TATGVVKLGDLGLGRFFSSKT-TAAHSLVG-------------- 198
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
T +Y +PE + Y+ D+WS+GC+ EM + F GD
Sbjct: 199 --------------TPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 141/320 (44%), Gaps = 71/320 (22%)
Query: 6 KVEKIGEGTYGVVYKARNCVTNETIALK--KIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
K E +G G +G V+K T +A K K R ++ E V + EIS++ ++ H N+
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN----EISVMNQLDHANL 148
Query: 64 VRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKT--FLYQILRGIAYCHSH 121
++L D S+ + LV EY +D + D D + + + T F+ QI GI + H
Sbjct: 149 IQLYDAFESKNDIVLVMEY--VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM 206
Query: 122 RVLHRDLKPQNLL-IDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
+LH DLKP+N+L ++R +K+ DFGLAR RY+
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLAR--------------------------RYK 240
Query: 181 VLAGSLILQFLKVV--TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
+ LKV T + APE+ + S P D+WSVG I +++ F GD++
Sbjct: 241 P------REKLKVNFGTPEFLAPEV-VNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+ L I +W ++ +++ + +SK+L
Sbjct: 294 AETLNNILAC-----------------------RWDLED--EEFQDISEEAKEFISKLLI 328
Query: 299 MDPSRRITARSALEHEYFRD 318
+ S RI+A AL+H + D
Sbjct: 329 KEKSWRISASEALKHPWLSD 348
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 73/314 (23%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIGEG+ G+V AR + +A+K + L ++ E+ ++++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR--ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHSHRVL 124
++L+++ E+L + D + RL I T +L+ +AY H+ V+
Sbjct: 110 SYLVGEELWVLMEFL------QGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFG--IPVRTFTHEHWGSTGISIYFSFLRYRVL 182
HRD+K ++L+ +KL+DFG +P R + L
Sbjct: 164 HRDIKSDSILLT-LDGRVKLSDFGFCAQISKDVPKR---------------------KXL 201
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDEL 242
G T ++ APE++ S Y+T VD+WS+G + EMV+ P + DS + +
Sbjct: 202 VG----------TPYWMAPEVISRSL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM 250
Query: 243 FKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPS 302
++ D+ P P K+ S ++ V+R D L +ML DP
Sbjct: 251 KRL--------RDSPP-----PKLKN------SHKVSPVLR-------DFLERMLVRDPQ 284
Query: 303 RRITARSALEHEYF 316
R TA+ L+H +
Sbjct: 285 ERATAQELLDHPFL 298
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 61/319 (19%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
++ +EK+GEG+YG VYKA + T + +A+K++ +E + + + I+EIS++++ ++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI----IKEISIMQQCDSPHV 86
Query: 64 VRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
V+ L++V EY + + I T L L+G+ Y H R
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRD+K N+L++ +A KLADFG+A L
Sbjct: 147 IHRDIKAGNILLNTEGHA-KLADFGVAGQ-----------------------------LT 176
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
+ + + T ++ APE+ + Y+ D+WS+G EM +P + ++I +
Sbjct: 177 DXMAKRNXVIGTPFWMAPEV-IQEIGYNCVADIWSLGITAIEMAEGKPPY---ADIHPMR 232
Query: 244 KIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSR 303
IF + P P F+ P+ S D + + L P +
Sbjct: 233 AIFMIPTNPP----------PTFRK--PELWSDNF-----------TDFVKQCLVKSPEQ 269
Query: 304 RITARSALEHEYFRDVEFV 322
R TA L+H + R + V
Sbjct: 270 RATATQLLQHPFVRSAKGV 288
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPAFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ED + T SA K
Sbjct: 215 SPFLGDTKQETLANVSAV-NYEFEDEYFSNT------SALAK------------------ 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ED + T SA K
Sbjct: 215 SPFLGDTKQETLANVSAV-NYEFEDEYFSNT------SALAK------------------ 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 124
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 178
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 179 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 213
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 214 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 248
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 124
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 178
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 179 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 213
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 214 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 248
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ED + T SA K
Sbjct: 215 SPFLGDTKQETLANVSAV-NYEFEDEYFSNT------SALAK------------------ 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 140/354 (39%), Gaps = 106/354 (29%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQED---EGVPSTAIR---EISLLKEMQHGNI 63
IG+G+YGVV R + N+T A++ I++ ++ + P R E+ L+K++ H NI
Sbjct: 34 IGQGSYGVV---RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 64 VRLQDVVHSEKKLYLVFE-------------YLD-------LDL-KKHMDSCP------- 95
RL +V E+ + LV E ++D +D+ K + CP
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 96 -----------DFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLID-RRTNALK 143
DF +LI + QI + Y H+ + HRD+KP+N L ++ +K
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK 210
Query: 144 LADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEI 203
L DFGL++ F + E++G T K T ++ APE+
Sbjct: 211 LVDFGLSKEF---YKLNNGEYYGMT----------------------TKAGTPYFVAPEV 245
Query: 204 L-LGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFR---VLGTPNEDTWPG 259
L + Y D WS G + ++ FPG ++ D + ++ PN +
Sbjct: 246 LNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNV--- 302
Query: 260 VTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEH 313
L P DLLS +L + R A AL+H
Sbjct: 303 -------------------------LSPLARDLLSNLLNRNVDERFDAMRALQH 331
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 140/327 (42%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DFGNE------- 173
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
++ + G T + APEI + D+WS+G I +++
Sbjct: 174 --------FKNIFG----------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 41/254 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
+ YE + IG G+YG K R + + K++ E + E++LL+E++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 62 NIVRLQDVV--HSEKKLYLVFEYLDL-DLKKHMDSCPDFAN--DPRLIKTFLYQILRGIA 116
NIVR D + + LY+V EY + DL + D + + Q+ +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YCH-----SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
CH H VLHRDLKP N+ +D + N +KL DFGLAR H+ T +
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLAR-------ILNHD----TSFA 173
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
F V T +Y +PE + Y+ D+WS+GC+ E+ P
Sbjct: 174 KAF------------------VGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 232 LFPGDSEIDELFKI 245
F S+ + KI
Sbjct: 215 PFTAFSQKELAGKI 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 41/254 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
+ YE + IG G+YG K R + + K++ E + E++LL+E++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 62 NIVRLQDVV--HSEKKLYLVFEYLDL-DLKKHMDSCPDFAN--DPRLIKTFLYQILRGIA 116
NIVR D + + LY+V EY + DL + D + + Q+ +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YCH-----SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
CH H VLHRDLKP N+ +D + N +KL DFGLAR H+ T +
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLAR-------ILNHD----TSFA 173
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
F V T +Y +PE + Y+ D+WS+GC+ E+ P
Sbjct: 174 KTF------------------VGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 232 LFPGDSEIDELFKI 245
F S+ + KI
Sbjct: 215 PFTAFSQKELAGKI 228
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 155/376 (41%), Gaps = 120/376 (31%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNET----IALKKIR---------------LEQEDEG 43
+YE V+ +GEG +G K C+ ++ +A+K ++ LE +
Sbjct: 15 RYEIVDTLGEGAFG---KVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTT 71
Query: 44 VPSTAIREISLLKEMQH-GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP- 101
P++ R + +L+ +H G+I +VFE L L S DF +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHIC-------------IVFELLGL-------STYDFIKENG 111
Query: 102 ----RL--IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLI---------------DRRT- 139
RL I+ YQI + + + HS+++ H DLKP+N+L D RT
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
Query: 140 --NALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLW 197
+K+ DFG A T+ EH + V T
Sbjct: 172 INPDIKVVDFGSA--------TYDDEHHSTL------------------------VSTRH 199
Query: 198 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLG------- 250
YRAPE++L +S P DVWS+GCI E +FP + L + R+LG
Sbjct: 200 YRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 251 ---------TPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI-DLLSKMLCMD 300
+ W +S + S K P KE + +++E + DL+ KML D
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACK-PLKEF-MLSQDVEHERLFDLIQKMLEYD 316
Query: 301 PSRRITARSALEHEYF 316
P++RIT R AL+H +F
Sbjct: 317 PAKRITLREALKHPFF 332
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 72/327 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIA---LKKIRLEQEDEGVPSTAI-REISLLKE 57
D Y+ E++G G + VV K R T A +KK R + GV I RE+S+LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+QH N++ L +V ++ + L+ E + D +S + FL QIL
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE-----EEATEFLKQILN 125
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y HS ++ H DLKP+N +L+DR +K+ DFGLA F +E G
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DFGNEFKNIFG- 179
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T + APEI + D+WS+G I +++
Sbjct: 180 ------------------------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 214
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
F GD++ + L + V ++ + ++L
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK------------------------- 249
Query: 291 DLLSKMLCMDPSRRITARSALEHEYFR 317
D + ++L DP +R+T + +L+H + +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
+ YE + IG G+YG K R + + K++ E + E++LL+E++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 62 NIVRLQDVV--HSEKKLYLVFEYLD-LDLKKHMDSCPDFAN--DPRLIKTFLYQILRGIA 116
NIVR D + + LY+V EY + DL + D + + Q+ +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YCH-----SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
CH H VLHRDLKP N+ +D + N +KL DFGLAR F E G
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHD-EDFAKEFVG----- 178
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
T +Y +PE + Y+ D+WS+GC+ E+ P
Sbjct: 179 -----------------------TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 232 LFPGDSEIDELFKI 245
F S+ + KI
Sbjct: 215 PFTAFSQKELAGKI 228
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y E IG G+Y + + TN A+K I + D PS I EI LL+ QH
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD---PSEEI-EI-LLRYGQHP 81
Query: 62 NIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI+ L+DV K +YLV E LD L++ S R L+ I + +
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS-------EREASFVLHTIGKTV 134
Query: 116 AYCHSHRVLHRDLKPQNLL-IDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
Y HS V+HRDLKP N+L +D N L++ DFG A+
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL------------------- 175
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRP 231
R G L+ T + APE+ L + Y D+WS+G + M+ P
Sbjct: 176 -------RAENGLLM---TPCYTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
G S+ E +I +G+ F + W + D
Sbjct: 225 FANGPSDTPE--EILTRIGSGK------------FTLSGGNW---------NTVSETAKD 261
Query: 292 LLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L+SKML +DP +R+TA+ L+H + + +P
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 135/319 (42%), Gaps = 63/319 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+D Y+ E++G G +GVV++ T A K + E + T +EI + ++H
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRH 213
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLD--LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
+V L D + ++ +++E++ +K D + D + ++ Q+ +G+ +
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV--EYMRQVCKGLCHM 271
Query: 119 HSHRVLHRDLKPQNLLI-DRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
H + +H DLKP+N++ +R+N LKL DFGL A P ++
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSV----------------- 313
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+V G T + APE+ G + D+WSVG + +++ F G++
Sbjct: 314 --KVTTG----------TAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
+ + L + ++ + G++ G D + K+L
Sbjct: 361 DDETLRNVKSCDWNMDDSAFSGISE-------------------------DGKDFIRKLL 395
Query: 298 CMDPSRRITARSALEHEYF 316
DP+ R+T ALEH +
Sbjct: 396 LADPNTRMTIHQALEHPWL 414
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 146/324 (45%), Gaps = 67/324 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 119
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 120 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 163
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y +PE L G+ HYS D+WS+G EM V + P+ P
Sbjct: 164 ----------------VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
Query: 236 DSEIDELFKIFRVLGTPNEDTWP--GVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLL 293
D++ ED+ P + L D+ P +L + V +LE D +
Sbjct: 207 DAK---------------EDSRPPMAIFELLDY---IVNEPPPKLPSGVFSLEFQ--DFV 246
Query: 294 SKMLCMDPSRRITARSALEHEYFR 317
+K L +P+ R + + H + +
Sbjct: 247 NKCLIKNPAERADLKQLMVHAFIK 270
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 135/319 (42%), Gaps = 63/319 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+D Y+ E++G G +GVV++ T A K + E + T +EI + ++H
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRH 107
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDLD--LKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
+V L D + ++ +++E++ +K D + D + ++ Q+ +G+ +
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV--EYMRQVCKGLCHM 165
Query: 119 HSHRVLHRDLKPQNLLI-DRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
H + +H DLKP+N++ +R+N LKL DFGL A P ++
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSV----------------- 207
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
+V G T + APE+ G + D+WSVG + +++ F G++
Sbjct: 208 --KVTTG----------TAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
+ + L + ++ + G++ G D + K+L
Sbjct: 255 DDETLRNVKSCDWNMDDSAFSGISE-------------------------DGKDFIRKLL 289
Query: 298 CMDPSRRITARSALEHEYF 316
DP+ R+T ALEH +
Sbjct: 290 LADPNTRMTIHQALEHPWL 308
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 149/338 (44%), Gaps = 63/338 (18%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 126
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 181
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 182 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 225
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y +PE L G+ HYS D+WS+G EM V + P+ P
Sbjct: 226 ----------------VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPP 268
Query: 236 DSEIDELFKIFRVLGTPNEDTWP-----------GVTSLP-----DFKSAFPKWPSKELG 279
D++ EL +V G E G+ S P + P +L
Sbjct: 269 DAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP 328
Query: 280 TVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
+ V +LE D ++K L +P+ R + + H + +
Sbjct: 329 SAVFSLEFQ--DFVNKCLIKNPAERADLKQLMVHAFIK 364
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 141/323 (43%), Gaps = 76/323 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +E ++G G +VY+ + T + ALK ++ + D+ + T EI +L + H
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK-KTVDKKIVRT---EIGVLLRLSHP 108
Query: 62 NIVRLQDVVHSEKKLYLVFEYL------DLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI++L+++ + ++ LV E + D ++K S D A+ + QIL +
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK-------QILEAV 161
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRT--NALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
AY H + ++HRDLKP+NLL LK+ADFGL++
Sbjct: 162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK---------------------- 199
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCI-FAEMVNQRPL 232
+ ++VL ++ T Y APEIL G Y VD+WSVG I + + P
Sbjct: 200 --IVEHQVLMKTV------CGTPGYCAPEILRGC-AYGPEVDMWSVGIITYILLCGFEPF 250
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
+ E + F R+L ++ P W L DL
Sbjct: 251 Y---DERGDQFMFRRILNC-------------EYYFISPWWDEVSLNAK---------DL 285
Query: 293 LSKMLCMDPSRRITARSALEHEY 315
+ K++ +DP +R+T AL+H +
Sbjct: 286 VRKLIVLDPKKRLTTFQALQHPW 308
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 137/332 (41%), Gaps = 75/332 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y E IG G+Y + + TN A+K I + D PS I EI LL+ QH
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD---PSEEI-EI-LLRYGQHP 81
Query: 62 NIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI+ L+DV K +YLV E LD L++ S R L+ I + +
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS-------EREASFVLHTIGKTV 134
Query: 116 AYCHSHRVLHRDLKPQNLL-IDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
Y HS V+HRDLKP N+L +D N L++ DFG A+
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL------------------- 175
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-NQRP 231
R G L+ T + APE+ L + Y D+WS+G + M+ P
Sbjct: 176 -------RAENGLLM---TPCYTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
G S+ E +I +G+ F + W + D
Sbjct: 225 FANGPSDTPE--EILTRIGSGK------------FTLSGGNW---------NTVSETAKD 261
Query: 292 LLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L+SKML +DP +R+TA+ L+H + + +P
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 131/319 (41%), Gaps = 70/319 (21%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKI--RLEQEDEGVPSTAIR-EISLLKEMQHGNIVR 65
K+G G +G V+ V + L+++ + ++ VP I EI +LK + H NI++
Sbjct: 29 KLGSGAFGDVH----LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 66 LQDVVHSEKKLYLVFEYLDL-DLKKHMDSCP--DFANDPRLIKTFLYQILRGIAYCHSHR 122
+ +V +Y+V E + +L + + S A + + Q++ +AY HS
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 123 VLHRDLKPQNLLIDRRT--NALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
V+H+DLKP+N+L + + +K+ DFGLA F + EH +
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK------SDEHSTNA------------ 186
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEID 240
AG T Y APE+ R + D+WS G + ++ F G
Sbjct: 187 --AG----------TALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTG----- 227
Query: 241 ELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
TSL + + + R L P +DLL +ML D
Sbjct: 228 --------------------TSLEEVQQK-ATYKEPNYAVECRPLTPQAVDLLKQMLTKD 266
Query: 301 PSRRITARSALEHEYFRDV 319
P RR +A L HE+F+
Sbjct: 267 PERRPSAAQVLHHEWFKQA 285
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 59/336 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 119
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 120 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 163
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y +PE L G+ HYS D+WS+G EM V + P+ P
Sbjct: 164 ----------------VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS----AFPKWPSKELGTVVRNLE----P 287
D++ EL +V G E T S + P EL + N P
Sbjct: 207 DAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP 266
Query: 288 AGI------DLLSKMLCMDPSRRITARSALEHEYFR 317
+G+ D ++K L +P+ R + + H + +
Sbjct: 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 59/336 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 119
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 120 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 163
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y +PE L G+ HYS D+WS+G EM V + P+ P
Sbjct: 164 ----------------VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS----AFPKWPSKELGTVVRNLE----P 287
D++ EL +V G E T S + P EL + N P
Sbjct: 207 DAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP 266
Query: 288 AGI------DLLSKMLCMDPSRRITARSALEHEYFR 317
+G+ D ++K L +P+ R + + H + +
Sbjct: 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 47/251 (18%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +E++ ++G G GVV K ++ + +A K I LE + + + IRE+ +L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 74
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ ++ +LRG+AY
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE-----EILGKVSIAVLRGLAY 129
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 130 LREKHQIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 173
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y APE L G+ HYS D+WS+G E+ V + P+ P
Sbjct: 174 ----------------VGTRSYMAPERLQGT-HYSVQSDIWSMGLSLVELAVGRYPIPPP 216
Query: 236 DSEIDELFKIF 246
D++ EL IF
Sbjct: 217 DAK--ELEAIF 225
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 59/336 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 119
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 120 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 163
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y +PE L G+ HYS D+WS+G EM V + P+ P
Sbjct: 164 ----------------VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS----AFPKWPSKELGTVVRNLE----P 287
D++ EL +V G E T S + P EL + N P
Sbjct: 207 DAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP 266
Query: 288 AGI------DLLSKMLCMDPSRRITARSALEHEYFR 317
+G+ D ++K L +P+ R + + H + +
Sbjct: 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 59/336 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 119
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 120 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 163
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y +PE L G+ HYS D+WS+G EM V + P+ P
Sbjct: 164 ----------------VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPP 206
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS----AFPKWPSKELGTVVRNLE----P 287
D++ EL +V G E T S + P EL + N P
Sbjct: 207 DAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP 266
Query: 288 AGI------DLLSKMLCMDPSRRITARSALEHEYFR 317
+G+ D ++K L +P+ R + + H + +
Sbjct: 267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 154/376 (40%), Gaps = 120/376 (31%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNET----IALKKIR---------------LEQEDEG 43
+YE V+ +GEG +G K C+ ++ +A+K ++ LE +
Sbjct: 15 RYEIVDTLGEGAFG---KVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTT 71
Query: 44 VPSTAIREISLLKEMQH-GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP- 101
P++ R + +L+ +H G+I +VFE L L S DF +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHIC-------------IVFELLGL-------STYDFIKENG 111
Query: 102 ----RL--IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLI---------------DRRT- 139
RL I+ YQI + + + HS+++ H DLKP+N+L D RT
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
Query: 140 --NALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLW 197
+K+ DFG A T+ EH + V
Sbjct: 172 INPDIKVVDFGSA--------TYDDEHHSTL------------------------VXXRH 199
Query: 198 YRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLG------- 250
YRAPE++L +S P DVWS+GCI E +FP + L + R+LG
Sbjct: 200 YRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 251 ---------TPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI-DLLSKMLCMD 300
+ W +S + S K P KE + +++E + DL+ KML D
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACK-PLKEF-MLSQDVEHERLFDLIQKMLEYD 316
Query: 301 PSRRITARSALEHEYF 316
P++RIT R AL+H +F
Sbjct: 317 PAKRITLREALKHPFF 332
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 149/338 (44%), Gaps = 63/338 (18%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 91
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 146
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 147 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 190
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y +PE L G+ HYS D+WS+G EM V + P+ P
Sbjct: 191 ----------------VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPP 233
Query: 236 DSEIDELFKIFRVLGTPNEDTWP-----------GVTSLP-----DFKSAFPKWPSKELG 279
D++ EL +V G E G+ S P + P +L
Sbjct: 234 DAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLP 293
Query: 280 TVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
+ V +LE D ++K L +P+ R + + H + +
Sbjct: 294 SGVFSLEFQ--DFVNKCLIKNPAERADLKQLMVHAFIK 329
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 47/245 (19%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+E E++G G +G V + + T E +A+K+ R E + + EI ++K++ H N+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNV 75
Query: 64 VRLQDVVHSEKKL------YLVFEYLDL-DLKKHMD---SCPDFANDPRLIKTFLYQILR 113
V ++V +KL L EY + DL+K+++ +C P I+T L I
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP--IRTLLSDISS 133
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNAL--KLADFGLARAFGIPVRTFTHEHWGSTGIS 171
+ Y H +R++HRDLKP+N+++ L K+ D G A+
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD----------------- 176
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-R 230
G L +F V TL Y APE LL + Y+ VD WS G + E + R
Sbjct: 177 -----------QGELCTEF--VGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFR 222
Query: 231 PLFPG 235
P P
Sbjct: 223 PFLPN 227
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 50/251 (19%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL--EQEDEGVPSTAIREISLLKEMQHG 61
+ + +IG G++G VY AR+ +E +A+KK+ +Q +E I+E+ L++++H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKLRHP 114
Query: 62 NIVRLQDVVHSEKKLYLVFEYL-----DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
N ++ + E +LV EY DL L+ H + I + L+G+A
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASDL-LEVHKKPLQEVE-----IAAVTHGALQGLA 168
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HSH ++HRD+K N+L+ +KL DFG A P F
Sbjct: 169 YLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA-PANXF---------------- 210
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLG--SRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
V T ++ APE++L Y VDVWS+G E+ ++P
Sbjct: 211 ----------------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254
Query: 235 GDSEIDELFKI 245
+ + L+ I
Sbjct: 255 NMNAMSALYHI 265
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 47/245 (19%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+E E++G G +G V + + T E +A+K+ R E + + EI ++K++ H N+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL-EIQIMKKLNHPNV 74
Query: 64 VRLQDVVHSEKKL------YLVFEYLDL-DLKKHMD---SCPDFANDPRLIKTFLYQILR 113
V ++V +KL L EY + DL+K+++ +C P I+T L I
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP--IRTLLSDISS 132
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNAL--KLADFGLARAFGIPVRTFTHEHWGSTGIS 171
+ Y H +R++HRDLKP+N+++ L K+ D G A+
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD----------------- 175
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-R 230
G L +F V TL Y APE LL + Y+ VD WS G + E + R
Sbjct: 176 -----------QGELCTEF--VGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFR 221
Query: 231 PLFPG 235
P P
Sbjct: 222 PFLPN 226
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 50/251 (19%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL--EQEDEGVPSTAIREISLLKEMQHG 61
+ + +IG G++G VY AR+ +E +A+KK+ +Q +E I+E+ L++++H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKLRHP 75
Query: 62 NIVRLQDVVHSEKKLYLVFEYL-----DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
N ++ + E +LV EY DL L+ H + I + L+G+A
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCLGSASDL-LEVHKKPLQEVE-----IAAVTHGALQGLA 129
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HSH ++HRD+K N+L+ +KL DFG A P F
Sbjct: 130 YLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA-PANXF---------------- 171
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLG--SRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
V T ++ APE++L Y VDVWS+G E+ ++P
Sbjct: 172 ----------------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215
Query: 235 GDSEIDELFKI 245
+ + L+ I
Sbjct: 216 NMNAMSALYHI 226
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+ K+E+IG+G++G V+K + T + +A+K I LE+ ++ + +EI++L + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSSYV 83
Query: 64 VRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+ KL+++ EYL + F D I T L +IL+G+ Y HS +
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLHSEKK 141
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRD+K N+L+ + + +KLADFG+A L
Sbjct: 142 IHRDIKAANVLLSEQGD-VKLADFGVAGQ-----------------------------LT 171
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
+ I + V T ++ APE++ S Y + D+WS+G E+ P
Sbjct: 172 DTQIKRNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGEP------------ 218
Query: 244 KIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSR 303
PN D P + F P T+V + + + + L DPS
Sbjct: 219 --------PNSDMHP-------MRVLF-LIPKNNPPTLVGDFTKSFKEFIDACLNKDPSF 262
Query: 304 RITARSALEHEY 315
R TA+ L+H++
Sbjct: 263 RPTAKELLKHKF 274
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 135/325 (41%), Gaps = 75/325 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE E IG G+Y V + + TN A+K I + D P+ I EI LL+ QH
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---PTEEI-EI-LLRYGQHP 76
Query: 62 NIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI+ L+DV K +Y+V E LD L++ S R L+ I + +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFS-------EREASAVLFTITKTV 129
Query: 116 AYCHSHRVLHRDLKPQNLL-IDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
Y H+ V+HRDLKP N+L +D N ++++ DFG A+
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL------------------- 170
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RP 231
R G L+ T + APE+ L + Y D+WS+G + M+ P
Sbjct: 171 -------RAENGLLM---TPCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTMLTGYTP 219
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
G + E +I +G+ F + W S + D
Sbjct: 220 FANGPDDTPE--EILARIGSGK------------FSLSGGYWNS---------VSDTAKD 256
Query: 292 LLSKMLCMDPSRRITARSALEHEYF 316
L+SKML +DP +R+TA L H +
Sbjct: 257 LVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 150/355 (42%), Gaps = 61/355 (17%)
Query: 8 EKIGEGTYGVVYKARNCVT---NETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
+KIGEGT+ VY A + E IALK + +P++ I + E+Q +
Sbjct: 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHL--------IPTS--HPIRIAAELQCLTVA 76
Query: 65 RLQDVVHSEKKLYLVFEYLDLDLKK-HMDSCPDFANDPRL--IKTFLYQILRGIAYCHSH 121
QD V K + +++ + + +S D N ++ ++ + + + H
Sbjct: 77 GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQF 136
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAF---GIPVRTFTH-----EHWGSTGISIY 173
++HRD+KP N L +RR L DFGLA+ I + F E SI
Sbjct: 137 GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC 196
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PL 232
S R + +A + T +RAPE+L + +T +D+WS G IF +++ R P
Sbjct: 197 LS--RRQQVAP-------RAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Query: 233 FPGDSEIDELFKIFRVLGT--------------------PNEDTWPGVTSLPDFKSAFPK 272
+ ++ L +I + G+ P +D L S+ PK
Sbjct: 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPK 307
Query: 273 WPSKELGTVVRNLE------PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 321
S G NLE DLL K+L ++P+ RITA AL H +F+D+
Sbjct: 308 LTSDIQGHAT-NLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMSL 361
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ IG G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ D+ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +K+ADFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ IG G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ D+ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +K+ADFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 52/326 (15%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE E IG G VV A E +A+K+I LE+ + ++EI + + H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHP 68
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFAN---DPRLIKTFLYQILRG 114
NIV + +L+LV + L LD+ KH+ + + + D I T L ++L G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y H + +HRD+K N+L+ ++++ADFG++ +TG I
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFL-------------ATGGDITR 174
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
+ +R + T + APE++ R Y D+WS G E+ +
Sbjct: 175 NKVRKTFVG-----------TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY- 222
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
+ +VL ++ P + + K K+ G R ++S
Sbjct: 223 ------HKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKY-----GKSFRK-------MIS 264
Query: 295 KMLCMDPSRRITARSALEHEYFRDVE 320
L DP +R TA L H++F+ +
Sbjct: 265 LCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 52/323 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE E IG G VV A E +A+K+I LE+ + ++EI + + H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHP 73
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFAN---DPRLIKTFLYQILRG 114
NIV + +L+LV + L LD+ KH+ + + + D I T L ++L G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y H + +HRD+K N+L+ ++++ADFG++ +TG I
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFL-------------ATGGDITR 179
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
+ +R + T + APE++ R Y D+WS G E+ +
Sbjct: 180 NKVRKTFVG-----------TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY- 227
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
+ +VL ++ P + + K K+ G R ++S
Sbjct: 228 ------HKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKY-----GKSFRK-------MIS 269
Query: 295 KMLCMDPSRRITARSALEHEYFR 317
L DP +R TA L H++F+
Sbjct: 270 LCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 69/322 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 83
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 138
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G S+ SF
Sbjct: 139 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---------------GQLIDSMANSF 182
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM-VNQRPLFPG 235
V T Y +PE L G+ HYS D+WS+G EM V + P+ G
Sbjct: 183 ----------------VGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+ IF +L + + P PK PS V +LE D ++K
Sbjct: 226 SGSM----AIFELLDY--------IVNEPP-----PKLPSG-----VFSLEFQ--DFVNK 261
Query: 296 MLCMDPSRRITARSALEHEYFR 317
L +P+ R + + H + +
Sbjct: 262 CLIKNPAERADLKQLMVHAFIK 283
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 39/250 (15%)
Query: 4 YEKVEKIGEGTYGVVYKARNCV---TNETIALKKIRLEQEDEGVPSTA--IREISLLKEM 58
+E + +G+G YG V++ R T + A+K ++ TA E ++L+E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
+H IV L + KLYL+ EYL +L ++ F D +L +I + +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF--YLAEISMALGH 136
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
H +++RDLKP+N++++ + + +KL DFGL + I T TH G
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKE-SIHDGTVTHXFCG----------- 183
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
T+ Y APEIL+ S H + VD WS+G + +M+ P F G++
Sbjct: 184 -----------------TIEYMAPEILMRSGH-NRAVDWWSLGALMYDMLTGAPPFTGEN 225
Query: 238 EIDELFKIFR 247
+ KI +
Sbjct: 226 RKKTIDKILK 235
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 39/250 (15%)
Query: 4 YEKVEKIGEGTYGVVYKARNCV---TNETIALKKIRLEQEDEGVPSTA--IREISLLKEM 58
+E + +G+G YG V++ R T + A+K ++ TA E ++L+E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
+H IV L + KLYL+ EYL +L ++ F D +L +I + +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF--YLAEISMALGH 136
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
H +++RDLKP+N++++ + + +KL DFGL + I T TH G
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKE-SIHDGTVTHTFCG----------- 183
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDS 237
T+ Y APEIL+ S H + VD WS+G + +M+ P F G++
Sbjct: 184 -----------------TIEYMAPEILMRSGH-NRAVDWWSLGALMYDMLTGAPPFTGEN 225
Query: 238 EIDELFKIFR 247
+ KI +
Sbjct: 226 RKKTIDKILK 235
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 129/321 (40%), Gaps = 67/321 (20%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ +E++G G +GVV++ T K I + T EIS++ ++ H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHHP 108
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
++ L D + ++ L+ E+L + D+ + ++ Q G+ + H H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 122 RVLHRDLKPQNLLID-RRTNALKLADFGLARAFG----IPVRTFTHEHWGSTGISIYFSF 176
++H D+KP+N++ + ++ +++K+ DFGLA + V T T E
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAE------------- 215
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
+ APEI + D+W++G + +++ F G+
Sbjct: 216 ---------------------FAAPEI-VDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKM 296
+++ L + R +ED + V+ P D + +
Sbjct: 254 DDLETLQNVKRCDWEFDEDAFSSVS-------------------------PEAKDFIKNL 288
Query: 297 LCMDPSRRITARSALEHEYFR 317
L +P +R+T ALEH + +
Sbjct: 289 LQKEPRKRLTVHDALEHPWLK 309
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 140/323 (43%), Gaps = 70/323 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y E +G G +G+V++ + +T K ++++ D+ + +EIS+L +H
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK---KEISILNIARHR 61
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
NI+ L + S ++L ++FE++ LD+ + +++ F + R I ++++Q+ + + HS
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS 120
Query: 121 HRVLHRDLKPQNLLID-RRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
H + H D++P+N++ RR++ +K+ +FG AR P F
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNF------------------- 160
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRH----YSTPVDVWSVGCIFAEMVNQRPLFPG 235
L + APE H ST D+WS+G + +++ F
Sbjct: 161 ---------------RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA 205
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
++ + I T +E+ + + + +D + +
Sbjct: 206 ETNQQIIENIMNAEYTFDEEAF-------------------------KEISIEAMDFVDR 240
Query: 296 MLCMDPSRRITARSALEHEYFRD 318
+L + R+TA AL+H + +
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQ 263
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKK-IRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
E +G+G +G K + T E + +K+ IR ++E + T ++E+ +++ ++H N+++
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---RTFLKEVKVMRCLEHPNVLKF 72
Query: 67 QDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
V++ +K+L + EY+ + K MDS + R+ +F I G+AY HS
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRV--SFAKDIASGMAYLHSMN 128
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
++HRDL N L+ N + +ADFGLA R E G+ R +
Sbjct: 129 IIHRDLNSHNCLVRENKNVV-VADFGLA-------RLMVDEKTQPEGLRSLKKPDRKK-- 178
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
++ V ++ APE++ G R Y VDV+S G + E++ +
Sbjct: 179 ------RYTVVGNPYWMAPEMING-RSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 133/325 (40%), Gaps = 75/325 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D YE E IG G+Y V + + TN A+K I + D P+ I EI LL+ QH
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRD---PTEEI-EI-LLRYGQHP 76
Query: 62 NIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NI+ L+DV K +Y+V E LD L++ S R L+ I + +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFS-------EREASAVLFTITKTV 129
Query: 116 AYCHSHRVLHRDLKPQNLL-IDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
Y H+ V+HRDLKP N+L +D N ++++ DFG A+
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL------------------- 170
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC-IFAEMVNQRP 231
R G L T + APE+ L + Y D+WS+G ++ + P
Sbjct: 171 -------RAENG---LLXTPCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTXLTGYTP 219
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
G + E +I +G+ F + W S + D
Sbjct: 220 FANGPDDTPE--EILARIGSGK------------FSLSGGYWNS---------VSDTAKD 256
Query: 292 LLSKMLCMDPSRRITARSALEHEYF 316
L+SK L +DP +R+TA L H +
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 72
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 131
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + F + G + I
Sbjct: 132 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEFFKVKEPGESPI--------- 181
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 182 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 210
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 75/330 (22%)
Query: 8 EKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVR 65
EKI G G+ G V + +A+K++ ++ D A+ EI LL E H N++R
Sbjct: 38 EKILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIR 91
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTF-----LYQILRGIAYCHS 120
+++ LY+ E +L+L+ ++S + +L K + L QI G+A+ HS
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 121 HRVLHRDLKPQNLLI--------DRRTNALKL----ADFGLARAFGIPVRTFTHEHWGST 168
+++HRDLKPQN+L+ D++T A L +DFGL + F +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 169 GISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGS--RHYSTPVDVWSVGCIFAEM 226
G S +RAPE+L S R + +D++S+GC+F +
Sbjct: 212 GTS-------------------------GWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 227 VNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLE 286
+++ GD E + G+ SL + K R+L
Sbjct: 247 LSKGKHPFGDKYSRE------------SNIIRGIFSLDEMKCLHD-----------RSLI 283
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
DL+S+M+ DP +R TA L H F
Sbjct: 284 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 75/330 (22%)
Query: 8 EKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVR 65
EKI G G+ G V + +A+K++ ++ D A+ EI LL E H N++R
Sbjct: 38 EKILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIR 91
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTF-----LYQILRGIAYCHS 120
+++ LY+ E +L+L+ ++S + +L K + L QI G+A+ HS
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 121 HRVLHRDLKPQNLLI--------DRRTNALKL----ADFGLARAFGIPVRTFTHEHWGST 168
+++HRDLKPQN+L+ D++T A L +DFGL + F +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 169 GISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGS--RHYSTPVDVWSVGCIFAEM 226
G S +RAPE+L S R + +D++S+GC+F +
Sbjct: 212 GTS-------------------------GWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 227 VNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLE 286
+++ GD E + G+ SL + K R+L
Sbjct: 247 LSKGKHPFGDKYSRE------------SNIIRGIFSLDEMKCLHD-----------RSLI 283
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYF 316
DL+S+M+ DP +R TA L H F
Sbjct: 284 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 140/331 (42%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQED---EGVPSTAI-REISLLKE 57
D Y+ E++G G + +V K R T A K I+ Q GV I RE+S+L++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+ H N++ L DV + + L+ E + D +S + +F+ QIL
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----EEATSFIKQILD 126
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y H+ ++ H DLKP+N +L+D+ +KL DFGLA H G+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------------HEIEDGV 173
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
++ + G T + APEI + D+WS+G I +++
Sbjct: 174 E-------FKNIFG----------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLP-DFKSAFPKWPSKELGTVVRNLEPAG 289
F GD++ ++T +TS+ DF F S EL
Sbjct: 216 SPFLGDTK---------------QETLANITSVSYDFDEEFFSHTS-ELAK--------- 250
Query: 290 IDLLSKMLCMDPSRRITARSALEHEYFRDVE 320
D + K+L + +R+T + AL H + V+
Sbjct: 251 -DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 140/331 (42%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQED---EGVPSTAI-REISLLKE 57
D Y+ E++G G + +V K R T A K I+ Q GV I RE+S+L++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+ H N++ L DV + + L+ E + D +S + +F+ QIL
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----EEATSFIKQILD 126
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y H+ ++ H DLKP+N +L+D+ +KL DFGLA H G+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------------HEIEDGV 173
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
++ + G T + APEI + D+WS+G I +++
Sbjct: 174 E-------FKNIFG----------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLP-DFKSAFPKWPSKELGTVVRNLEPAG 289
F GD++ ++T +TS+ DF F S EL
Sbjct: 216 SPFLGDTK---------------QETLANITSVSYDFDEEFFSHTS-ELAK--------- 250
Query: 290 IDLLSKMLCMDPSRRITARSALEHEYFRDVE 320
D + K+L + +R+T + AL H + V+
Sbjct: 251 -DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ IG G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +K+ADFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 143/334 (42%), Gaps = 79/334 (23%)
Query: 8 EKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVR 65
EKI G G+ G V + +A+K++ ++ D A+ EI LL E H N++R
Sbjct: 20 EKILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIR 73
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTF-----LYQILRGIAYCHS 120
+++ LY+ E +L+L+ ++S + +L K + L QI G+A+ HS
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 121 HRVLHRDLKPQNLLI--------DRRTNALKL----ADFGLARAFGIPVRTFTHEHWGST 168
+++HRDLKPQN+L+ D++T A L +DFGL + +F +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 169 GISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYST------PVDVWSVGCI 222
G S +RAPE+L S + T +D++S+GC+
Sbjct: 194 GTS-------------------------GWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 223 FAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVV 282
F ++++ GD E + G+ SL + K
Sbjct: 229 FYYILSKGKHPFGDKYSRE------------SNIIRGIFSLDEMKCLHD----------- 265
Query: 283 RNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
R+L DL+S+M+ DP +R TA L H F
Sbjct: 266 RSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 144/365 (39%), Gaps = 96/365 (26%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNET----IALKKIRLEQEDEGVPSTAIREISLLKE 57
++YE V +GEGT+G V + CV + +ALK I+ E A EI++L++
Sbjct: 33 ERYEIVSTLGEGTFGRVVQ---CVDHRRGGARVALKIIK---NVEKYKEAARLEINVLEK 86
Query: 58 MQHGN------IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL-------I 104
+ + V++ D + + FE L L S DF D +
Sbjct: 87 INEKDPDNKNLCVQMFDWFDYHGHMCISFELLGL-------STFDFLKDNNYLPYPIHQV 139
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLI---------------DRRT---NALKLAD 146
+ +Q+ + + + H +++ H DLKP+N+L D R+ A+++ D
Sbjct: 140 RHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVD 199
Query: 147 FGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLG 206
FG A TF HEH + V T YRAPE++L
Sbjct: 200 FGSA--------TFDHEHHSTI------------------------VSTRHYRAPEVIL- 226
Query: 207 SRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDF 266
+S P DVWS+GCI E LF + L + R+LG F
Sbjct: 227 ELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYF 286
Query: 267 KSAFPKW-PSKELGTVVR-NLEPAG-------------IDLLSKMLCMDPSRRITARSAL 311
W + G VR N +P DL+ ML +P++R+T AL
Sbjct: 287 YRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEAL 346
Query: 312 EHEYF 316
+H +F
Sbjct: 347 QHPFF 351
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 140/331 (42%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQED---EGVPSTAI-REISLLKE 57
D Y+ E++G G + +V K R T A K I+ Q GV I RE+S+L++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+ H N++ L DV + + L+ E + D +S + +F+ QIL
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----EEATSFIKQILD 126
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y H+ ++ H DLKP+N +L+D+ +KL DFGLA H G+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------------HEIEDGV 173
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
++ + G T + APEI + D+WS+G I +++
Sbjct: 174 E-------FKNIFG----------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLP-DFKSAFPKWPSKELGTVVRNLEPAG 289
F GD++ ++T +TS+ DF F S EL
Sbjct: 216 SPFLGDTK---------------QETLANITSVSYDFDEEFFSHTS-ELAK--------- 250
Query: 290 IDLLSKMLCMDPSRRITARSALEHEYFRDVE 320
D + K+L + +R+T + AL H + V+
Sbjct: 251 -DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 75/316 (23%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIGEG+ G+V A T + +A+KK+ L ++ E+ ++++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR--ELLFNEVVIMRDYHHDNVVDMYS 109
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHSHRVL 124
+L++V E+L+ + D R+ I T +LR ++Y H+ V+
Sbjct: 110 SYLVGDELWVVMEFLE------GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFG--IPVRTFTHEHWGSTGISIYFSFLRYRVL 182
HRD+K ++L+ +KL+DFG +P R + L
Sbjct: 164 HRDIKSDSILLT-SDGRIKLSDFGFCAQVSKEVPKR---------------------KXL 201
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSR-HYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDE 241
G T ++ APE++ SR Y T VD+WS+G + EM++ P + + +
Sbjct: 202 VG----------TPYWMAPEVI--SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 249
Query: 242 LFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDP 301
+ +I D+ P P K ++ +V+R L ML +P
Sbjct: 250 MRRI--------RDSLP-----PRVKDL------HKVSSVLRG-------FLDLMLVREP 283
Query: 302 SRRITARSALEHEYFR 317
S+R TA+ L H + +
Sbjct: 284 SQRATAQELLGHPFLK 299
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 44/234 (18%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +EK+ ++G G GVV+K + + +A K I LE + + + IRE+ +L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 67
Query: 62 NIVRLQDVVHSEKKLYLVFEYLD---LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
IV +S+ ++ + E++D LD + K P+ +++ +++G+ Y
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTY 122
Query: 118 C-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+++HRD+KP N+L++ R +KL DFG++ G + +E G
Sbjct: 123 LREKHKIMHRDVKPSNILVNSR-GEIKLCDFGVS---GQLIDEMANEFVG---------- 168
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
T Y +PE L G+ HYS D+WS+G EM R
Sbjct: 169 ------------------TRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 133/315 (42%), Gaps = 74/315 (23%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+E +G G + V+ + +T + ALK I+ + S+ EI++LK+++H NIV L
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIK--KSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 67 QDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
+D+ S YLV E D L++ + + D L+ + Q+L + Y H
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYT----EKDASLV---IQQVLSAVKYLHE 124
Query: 121 HRVLHRDLKPQNL--LIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
+ ++HRDLKP+NL L + + + DFGL++ + G+ G
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPG--------- 172
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
Y APE+ L + YS VD WS+G I ++ P F ++E
Sbjct: 173 -------------------YVAPEV-LAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE 212
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
+LF+ + +F+S F W ++ + D + +L
Sbjct: 213 -SKLFEKIK-------------EGYYEFESPF--WD---------DISESAKDFICHLLE 247
Query: 299 MDPSRRITARSALEH 313
DP+ R T AL H
Sbjct: 248 KDPNERYTCEKALSH 262
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQED---EGVPSTAI-REISLLKE 57
D Y+ E++G G + +V K R T A K I+ Q GV I RE+S+L++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+ H N++ L DV + + L+ E + D +S + +F+ QIL
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----EEATSFIKQILD 126
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y H+ ++ H DLKP+N +L+D+ +KL DFGLA H G+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------------HEIEDGV 173
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
++ + G T + APEI + D+WS+G I +++
Sbjct: 174 E-------FKNIFG----------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLP-DFKSAFPKWPSKELGTVVRNLEPAG 289
F GD++ ++T +T++ DF F S EL
Sbjct: 216 SPFLGDTK---------------QETLANITAVSYDFDEEFFSQTS-ELAK--------- 250
Query: 290 IDLLSKMLCMDPSRRITARSALEHEYFRDVE 320
D + K+L + +R+T + AL H + V+
Sbjct: 251 -DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVV---YKARNC--VTNETIALKKIRLEQEDEGVPSTAIR-EISLL 55
D+Y + +G G G V ++ + C V + I+ +K + E P+ + EI +L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQI 111
K++ H I+++++ +E Y+ L+L + + + RL K + YQ+
Sbjct: 69 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTG 169
L + Y H + ++HRDLKP+N+L+ + +K+ DFG ++ G T
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------ETS 170
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL--GSRHYSTPVDVWSVGCIFAEMV 227
+ R L G T Y APE+L+ G+ Y+ VD WS+G I +
Sbjct: 171 L--------MRTLCG----------TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 212
Query: 228 NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
+ P F SE + + + + P V W +
Sbjct: 213 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 248
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRD 318
+DL+ K+L +DP R T AL H + +D
Sbjct: 249 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQED---EGVPSTAI-REISLLKE 57
D Y+ E++G G + +V K R T A K I+ Q GV I RE+S+L++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+ H N++ L DV + + L+ E + D +S + +F+ QIL
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----EEATSFIKQILD 126
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y H+ ++ H DLKP+N +L+D+ +KL DFGLA H G+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------------HEIEDGV 173
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
++ + G T + APEI + D+WS+G I +++
Sbjct: 174 E-------FKNIFG----------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLP-DFKSAFPKWPSKELGTVVRNLEPAG 289
F GD++ ++T +T++ DF F S EL
Sbjct: 216 SPFLGDTK---------------QETLANITAVSYDFDEEFFSQTS-ELAK--------- 250
Query: 290 IDLLSKMLCMDPSRRITARSALEHEYFRDVE 320
D + K+L + +R+T + AL H + V+
Sbjct: 251 -DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVV---YKARNC--VTNETIALKKIRLEQEDEGVPSTAIR-EISLL 55
D+Y + +G G G V ++ + C V + I+ +K + E P+ + EI +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQI 111
K++ H I+++++ +E Y+ L+L + + + RL K + YQ+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTG 169
L + Y H + ++HRDLKP+N+L+ + +K+ DFG ++ G T
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------ETS 171
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL--GSRHYSTPVDVWSVGCIFAEMV 227
+ R L G T Y APE+L+ G+ Y+ VD WS+G I +
Sbjct: 172 L--------MRTLCG----------TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 228 NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
+ P F SE + + + + P V W +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRD 318
+DL+ K+L +DP R T AL H + +D
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 79/334 (23%)
Query: 8 EKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVR 65
EKI G G+ G V + +A+K++ ++ D A+ EI LL E H N++R
Sbjct: 20 EKILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCD-----IALMEIKLLTESDDHPNVIR 73
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTF-----LYQILRGIAYCHS 120
+++ LY+ E +L+L+ ++S + +L K + L QI G+A+ HS
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 121 HRVLHRDLKPQNLLI--------DRRTNALKL----ADFGLARAFGIPVRTFTHEHWGST 168
+++HRDLKPQN+L+ D++T A L +DFGL + F +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 193
Query: 169 GISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYST------PVDVWSVGCI 222
G S +RAPE+L S + T +D++S+GC+
Sbjct: 194 GTS-------------------------GWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 223 FAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVV 282
F ++++ GD E + G+ SL + K
Sbjct: 229 FYYILSKGKHPFGDKYSRE------------SNIIRGIFSLDEMKCLHD----------- 265
Query: 283 RNLEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
R+L DL+S+M+ DP +R TA L H F
Sbjct: 266 RSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 74/321 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ + +G G + V A + T + +A+K I E EG + EI++L +++H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHP 76
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIV L D+ S LYL+ E D ++K + D + RLI +Q+L +
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLI----FQVLDAV 129
Query: 116 AYCHSHRVLHRDLKPQNLL---IDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
Y H ++HRDLKP+NLL +D + + ++DFGL++ E GS
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKM----------EDPGS----- 173
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
VL+ + T Y APE+ L + YS VD WS+G I ++ P
Sbjct: 174 --------VLSTA-------CGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F +++ +I + +++ P W ++ + D
Sbjct: 218 FYDENDAKLFEQILKA----------------EYEFDSPYW---------DDISDSAKDF 252
Query: 293 LSKMLCMDPSRRITARSALEH 313
+ ++ DP +R T AL+H
Sbjct: 253 IRHLMEKDPEKRFTCEQALQH 273
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 34/228 (14%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+ K+++IG+G++G VYK + T E +A+K I LE+ ++ + +EI++L + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYI 79
Query: 64 VRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
R KL+++ EYL +D + I T L +IL+G+ Y HS R
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGG--SALDLLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRD+K N+L+ + + +KLADFG+A L
Sbjct: 138 IHRDIKAANVLLSEQGD-VKLADFGVAGQ-----------------------------LT 167
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+ I + V T ++ APE++ S Y D+WS+G E+ P
Sbjct: 168 DTQIKRNXFVGTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGEP 214
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 42/232 (18%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+ K+EKIG+G++G V+K + T + +A+K I LE+ ++ + +EI++L + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 87
Query: 64 VRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
+ + KL+++ EYL LDL ++ P D I T L +IL+G+ Y H
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDL---LEPGP---LDETQIATILREILKGLDYLH 141
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
S + +HRD+K N+L+ +KLADFG+A
Sbjct: 142 SEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQ--------------------------- 173
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
L + I + V T ++ APE++ S Y + D+WS+G E+ P
Sbjct: 174 --LTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGEP 222
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVV---YKARNC--VTNETIALKKIRLEQEDEGVPSTAIR-EISLL 55
D+Y + +G G G V ++ + C V + I+ +K + E P+ + EI +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQI 111
K++ H I+++++ +E Y+ L+L + + + RL K + YQ+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTG 169
L + Y H + ++HRDLKP+N+L+ + +K+ DFG ++ G T
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------ETS 171
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL--GSRHYSTPVDVWSVGCIFAEMV 227
+ R L G T Y APE+L+ G+ Y+ VD WS+G I +
Sbjct: 172 L--------MRTLCG----------TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 228 NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
+ P F SE + + + + P V W +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRD 318
+DL+ K+L +DP R T AL H + +D
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVV---YKARNC--VTNETIALKKIRLEQEDEGVPSTAIR-EISLL 55
D+Y + +G G G V ++ + C V + I+ +K + E P+ + EI +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQI 111
K++ H I+++++ +E Y+ L+L + + + RL K + YQ+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTG 169
L + Y H + ++HRDLKP+N+L+ + +K+ DFG ++ G T
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------ETS 171
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL--GSRHYSTPVDVWSVGCIFAEMV 227
+ R L G T Y APE+L+ G+ Y+ VD WS+G I +
Sbjct: 172 L--------MRTLCG----------TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213
Query: 228 NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
+ P F SE + + + + P V W +
Sbjct: 214 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 249
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRD 318
+DL+ K+L +DP R T AL H + +D
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 144/357 (40%), Gaps = 80/357 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNET-IALKKIRLEQEDEGVPSTAIR-EISLLKEMQ 59
++YE V +GEGT+G V + + ++ +ALK IR + G A R EI++LK+++
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKKIK 106
Query: 60 HGN------IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-LIKTFLYQIL 112
+ V + D + + + FE L + + + +F P ++ YQ+
Sbjct: 107 EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE-NNFQPYPLPHVRHMAYQLC 165
Query: 113 RGIAYCHSHRVLHRDLKPQNLLI------------------DRRTNALKLADFGLARAFG 154
+ + H +++ H DLKP+N+L + ++++ADFG A
Sbjct: 166 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---- 221
Query: 155 IPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPV 214
TF HEH + V T YR PE++L ++ P
Sbjct: 222 ----TFDHEHHTTI------------------------VATRHYRPPEVIL-ELGWAQPC 252
Query: 215 DVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP 274
DVWS+GCI E LF + L + ++LG F W
Sbjct: 253 DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD 312
Query: 275 --SKELGTVVRNLEPAG-------------IDLLSKMLCMDPSRRITARSALEHEYF 316
S + V N +P DL+ +ML DP++RIT AL H +F
Sbjct: 313 ENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVV---YKARNC--VTNETIALKKIRLEQEDEGVPSTAIR-EISLL 55
D+Y + +G G G V ++ + C V + I+ +K + E P+ + EI +L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQI 111
K++ H I+++++ +E Y+ L+L + + + RL K + YQ+
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTG 169
L + Y H + ++HRDLKP+N+L+ + +K+ DFG ++ G T
Sbjct: 130 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------ETS 177
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL--GSRHYSTPVDVWSVGCIFAEMV 227
+ R L G T Y APE+L+ G+ Y+ VD WS+G I +
Sbjct: 178 L--------MRTLCG----------TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 219
Query: 228 NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
+ P F SE + + + + P V W +
Sbjct: 220 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WA---------EVSE 255
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRD 318
+DL+ K+L +DP R T AL H + +D
Sbjct: 256 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 42/232 (18%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+ K+EKIG+G++G V+K + T + +A+K I LE+ ++ + +EI++L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 67
Query: 64 VRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
+ + KL+++ EYL LDL ++ P D I T L +IL+G+ Y H
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDL---LEPGP---LDETQIATILREILKGLDYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
S + +HRD+K N+L+ +KLADFG+A
Sbjct: 122 SEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQ--------------------------- 153
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
L + I + V T ++ APE++ S Y + D+WS+G E+ P
Sbjct: 154 --LTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGEP 202
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 144/357 (40%), Gaps = 80/357 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNET-IALKKIRLEQEDEGVPSTAIR-EISLLKEMQ 59
++YE V +GEGT+G V + + ++ +ALK IR + G A R EI++LK+++
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKKIK 83
Query: 60 HGN------IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-LIKTFLYQIL 112
+ V + D + + + FE L + + + +F P ++ YQ+
Sbjct: 84 EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE-NNFQPYPLPHVRHMAYQLC 142
Query: 113 RGIAYCHSHRVLHRDLKPQNLLI------------------DRRTNALKLADFGLARAFG 154
+ + H +++ H DLKP+N+L + ++++ADFG A
Sbjct: 143 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---- 198
Query: 155 IPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPV 214
TF HEH + V T YR PE++L ++ P
Sbjct: 199 ----TFDHEHHTTI------------------------VATRHYRPPEVIL-ELGWAQPC 229
Query: 215 DVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP 274
DVWS+GCI E LF + L + ++LG F W
Sbjct: 230 DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD 289
Query: 275 --SKELGTVVRNLEPAG-------------IDLLSKMLCMDPSRRITARSALEHEYF 316
S + V N +P DL+ +ML DP++RIT AL H +F
Sbjct: 290 ENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 75
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + + +L++ + QI +G+ Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ-YTSQICKGMEYLG 134
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 135 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 184
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 185 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 213
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 74/321 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ + +G G + V A + T + +A+K I E EG + EI++L +++H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHP 76
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIV L D+ S LYL+ E D ++K + D + RLI +Q+L +
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLI----FQVLDAV 129
Query: 116 AYCHSHRVLHRDLKPQNLL---IDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
Y H ++HRDLKP+NLL +D + + ++DFGL++ E GS
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKM----------EDPGS----- 173
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
VL+ + T Y APE+ L + YS VD WS+G I ++ P
Sbjct: 174 --------VLSTA-------CGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F +++ +I + +++ P W ++ + D
Sbjct: 218 FYDENDAKLFEQILKA----------------EYEFDSPYWD---------DISDSAKDF 252
Query: 293 LSKMLCMDPSRRITARSALEH 313
+ ++ DP +R T AL+H
Sbjct: 253 IRHLMEKDPEKRFTCEQALQH 273
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 138/331 (41%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVV---YKARNC--VTNETIALKKIRLEQEDEGVPSTAIR-EISLL 55
D+Y + +G G G V ++ + C V I+ +K + E P+ + EI +L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQI 111
K++ H I+++++ +E Y+ L+L + + + RL K + YQ+
Sbjct: 209 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTG 169
L + Y H + ++HRDLKP+N+L+ + +K+ DFG ++ G T
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------ETS 310
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL--GSRHYSTPVDVWSVGCIFAEMV 227
+ R L G T Y APE+L+ G+ Y+ VD WS+G I +
Sbjct: 311 L--------MRTLCG----------TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 352
Query: 228 NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
+ P F SE + + + + P V W +
Sbjct: 353 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WAE---------VSE 388
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRD 318
+DL+ K+L +DP R T AL H + +D
Sbjct: 389 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 144/357 (40%), Gaps = 80/357 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNET-IALKKIRLEQEDEGVPSTAIR-EISLLKEMQ 59
++YE V +GEGT+G V + + ++ +ALK IR + G A R EI++LK+++
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKKIK 74
Query: 60 HGN------IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-LIKTFLYQIL 112
+ V + D + + + FE L + + + +F P ++ YQ+
Sbjct: 75 EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE-NNFQPYPLPHVRHMAYQLC 133
Query: 113 RGIAYCHSHRVLHRDLKPQNLLI------------------DRRTNALKLADFGLARAFG 154
+ + H +++ H DLKP+N+L + ++++ADFG A
Sbjct: 134 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---- 189
Query: 155 IPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPV 214
TF HEH + V T YR PE++L ++ P
Sbjct: 190 ----TFDHEHHTTI------------------------VATRHYRPPEVIL-ELGWAQPC 220
Query: 215 DVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP 274
DVWS+GCI E LF + L + ++LG F W
Sbjct: 221 DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD 280
Query: 275 --SKELGTVVRNLEPAG-------------IDLLSKMLCMDPSRRITARSALEHEYF 316
S + V N +P DL+ +ML DP++RIT AL H +F
Sbjct: 281 ENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 42/232 (18%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+ K+EKIG+G++G V+K + T + +A+K I LE+ ++ + +EI++L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 67
Query: 64 VRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
+ + KL+++ EYL LDL ++ P D I T L +IL+G+ Y H
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDL---LEPGP---LDETQIATILREILKGLDYLH 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
S + +HRD+K N+L+ +KLADFG+A
Sbjct: 122 SEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQ--------------------------- 153
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
L + I + V T ++ APE++ S Y + D+WS+G E+ P
Sbjct: 154 --LTDTQIKRNXFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGEP 202
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 42/232 (18%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+ K+EKIG+G++G V+K + T + +A+K I LE+ ++ + +EI++L + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ-QEITVLSQCDSPYV 82
Query: 64 VRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
+ + KL+++ EYL LDL ++ P D I T L +IL+G+ Y H
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDL---LEPGP---LDETQIATILREILKGLDYLH 136
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
S + +HRD+K N+L+ +KLADFG+A
Sbjct: 137 SEKKIHRDIKAANVLLSEH-GEVKLADFGVAGQ--------------------------- 168
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
L + I + V T ++ APE++ S Y + D+WS+G E+ P
Sbjct: 169 --LTDTQIKRNXFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGEP 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 43/238 (18%)
Query: 1 MDQYEK-----VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIRE 51
M Q+E+ ++++G+G +G V Y T E +A+KK++ E+ RE
Sbjct: 22 MTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFERE 79
Query: 52 ISLLKEMQHGNIVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFL 108
I +LK +QH NIV+ + V +S + L L+ EYL L+ ++ + + +L++ +
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YT 138
Query: 109 YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGST 168
QI +G+ Y + R +HRDL +N+L++ N +K+ DFGL + + G +
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 169 GISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I WY APE L S+ +S DVWS G + E+
Sbjct: 198 PI-------------------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 43/238 (18%)
Query: 1 MDQYEK-----VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIRE 51
M Q+E+ ++++G+G +G V Y T E +A+KK++ E+ RE
Sbjct: 22 MTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFERE 79
Query: 52 ISLLKEMQHGNIVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFL 108
I +LK +QH NIV+ + V +S + L L+ EYL L+ ++ + + +L++ +
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YT 138
Query: 109 YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGST 168
QI +G+ Y + R +HRDL +N+L++ N +K+ DFGL + + G +
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 169 GISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I WY APE L S+ +S DVWS G + E+
Sbjct: 198 PI-------------------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 228
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 74/321 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ + +G G + V A + T + +A+K I E EG + EI++L +++H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHP 76
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIV L D+ S LYL+ E D ++K + D + RLI +Q+L +
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLI----FQVLDAV 129
Query: 116 AYCHSHRVLHRDLKPQNLL---IDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
Y H ++HRDLKP+NLL +D + + ++DFGL++ E GS
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKM----------EDPGS----- 173
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
VL+ + T Y APE+ L + YS VD WS+G I ++ P
Sbjct: 174 --------VLSTA-------CGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F +++ +I + +++ P W ++ + D
Sbjct: 218 FYDENDAKLFEQILKA----------------EYEFDSPYWD---------DISDSAKDF 252
Query: 293 LSKMLCMDPSRRITARSALEH 313
+ ++ DP +R T AL+H
Sbjct: 253 IRHLMEKDPEKRFTCEQALQH 273
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 103
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 162
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 163 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 212
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 213 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 241
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 74/340 (21%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+ +E ++ +G G +GVV++A+N V + A+K+IRL E +RE+ L +++H
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEH 62
Query: 61 GNIVR----------LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKT---- 106
IVR + + S K+YL Y+ + L + ++ D+ N I+
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYL---YIQMQLCRK-ENLKDWMNGRCTIEERERS 118
Query: 107 ----FLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTH 162
QI + + HS ++HRDLKP N+ + +K+ DFGL A
Sbjct: 119 VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMD-------Q 170
Query: 163 EHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCI 222
+ T ++ ++ R+ G T Y +PE + G+ YS VD++S+G I
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVG----------TKLYMSPEQIHGN-SYSHKVDIFSLGLI 219
Query: 223 FAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS-AFPKWPSKELGTV 281
E+ L+P ++++ V +L D ++ FP +++
Sbjct: 220 LFEL-----LYPFSTQMER------------------VRTLTDVRNLKFPPLFTQKY--- 253
Query: 282 VRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEF 321
P ++ ML P R A + +E+ F D++F
Sbjct: 254 -----PCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF 288
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 138/331 (41%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVV---YKARNC--VTNETIALKKIRLEQEDEGVPSTAIR-EISLL 55
D+Y + +G G G V ++ + C V I+ +K + E P+ + EI +L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQI 111
K++ H I+++++ +E Y+ L+L + + + RL K + YQ+
Sbjct: 195 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTG 169
L + Y H + ++HRDLKP+N+L+ + +K+ DFG ++ G T
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------ETS 296
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL--GSRHYSTPVDVWSVGCIFAEMV 227
+ R L G T Y APE+L+ G+ Y+ VD WS+G I +
Sbjct: 297 L--------MRTLCG----------TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338
Query: 228 NQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEP 287
+ P F SE + + + + P V W +
Sbjct: 339 SGYPPF---SEHRTQVSLKDQITSGKYNFIPEV------------WAE---------VSE 374
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRD 318
+DL+ K+L +DP R T AL H + +D
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK L+ E REI +LK +QH N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 135
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 136 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 185
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 186 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 79
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 138
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 139 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 188
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 189 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 72
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 131
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 132 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 181
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 182 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK L+ E REI +LK +QH N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 130
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 131 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 180
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 181 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 75
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 134
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 135 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 184
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 185 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 72
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 131
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 132 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 181
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 182 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 77
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 136
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 137 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 186
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 187 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 70
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 129
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 130 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 179
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 180 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 208
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 131/318 (41%), Gaps = 72/318 (22%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+E E +G G + V A T + A+K I ++ +G S+ EI++L++++H NI
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIP-KKALKGKESSIENEIAVLRKIKHENI 82
Query: 64 VRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
V L+D+ S LYLV E D ++K + D + T + Q+L + Y
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS-------TLIRQVLDAVYY 135
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALK--LADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H ++HRDLKP+NLL + K ++DFGL++
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK------------------------ 171
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
+ G + T Y APE+ L + YS VD WS+G I ++ P F
Sbjct: 172 ------MEGKGDVMSTACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 224
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
+++ +I + +++ P W ++ + D +
Sbjct: 225 ENDSKLFEQILKA----------------EYEFDSPYWD---------DISDSAKDFIRN 259
Query: 296 MLCMDPSRRITARSALEH 313
++ DP++R T A H
Sbjct: 260 LMEKDPNKRYTCEQAARH 277
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 58/245 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +E + ++G+G +G VYKA+N T+ A K I + E+E + EI +L H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHP 94
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL-----------IKTFLYQ 110
NIV+L D + E L+++ E+ C A D + I+ Q
Sbjct: 95 NIVKLLDAFYYENNLWILIEF-----------CAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
L + Y H ++++HRDLK N+L + +KLADFG++ + I
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGD-IKLADFGVSAK-------------NTRTI 189
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL----GSRHYSTPVDVWSVGCIFAEM 226
SF + T ++ APE+++ R Y DVWS+G EM
Sbjct: 190 QRRDSF----------------IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 227 VNQRP 231
P
Sbjct: 234 AEIEP 238
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 78
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 137
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 138 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 187
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 188 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 216
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 58/245 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +E + ++G+G +G VYKA+N T+ A K I + E+E + EI +L H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHP 94
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL-----------IKTFLYQ 110
NIV+L D + E L+++ E+ C A D + I+ Q
Sbjct: 95 NIVKLLDAFYYENNLWILIEF-----------CAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
L + Y H ++++HRDLK N+L + +KLADFG++ + I
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGD-IKLADFGVSAK-------------NTRXI 189
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL----GSRHYSTPVDVWSVGCIFAEM 226
SF + T ++ APE+++ R Y DVWS+G EM
Sbjct: 190 QRRDSF----------------IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 227 VNQRP 231
P
Sbjct: 234 AEIEP 238
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
++++G+G +G V Y T E +A+KK++ E+ REI +LK +QH N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH--LRDFEREIEILKSLQHDN 73
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ EYL L+ ++ + + +L++ + QI +G+ Y
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 132
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HR+L +N+L++ N +K+ DFGL + + + G + I
Sbjct: 133 TKRYIHRNLATRNILVENE-NRVKIGDFGLTKVLPQDKEYYKVKEPGESPI--------- 182
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 183 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 74/324 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D Y+ + +G G + V A + T + +A+K I ++ EG + EI++L +++H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-AKKALEGKEGSMENEIAVLHKIKHP 76
Query: 62 NIVRLQDVVHSEKKLYLVF------EYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
NIV L D+ S LYL+ E D ++K + D + RLI +Q+L +
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLI----FQVLDAV 129
Query: 116 AYCHSHRVLHRDLKPQNLL---IDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
Y H ++HRDLKP+NLL +D + + ++DFGL++ E GS
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKM----------EDPGS----- 173
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
VL+ + T Y APE+ L + YS VD WS+G I ++ P
Sbjct: 174 --------VLSTA-------CGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F +++ +I + +++ P W ++ + D
Sbjct: 218 FYDENDAKLFEQILKA----------------EYEFDSPYW---------DDISDSAKDF 252
Query: 293 LSKMLCMDPSRRITARSALEHEYF 316
+ ++ DP +R T AL+H +
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 58/243 (23%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+E V ++G+G +G VYKA+N T A K I + E+E I EI +L H I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE--LEDYIVEIEILATCDHPYI 70
Query: 64 VRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL-----------IKTFLYQIL 112
V+L + + KL+++ E+ CP A D + I+ Q+L
Sbjct: 71 VKLLGAYYHDGKLWIMIEF-----------CPGGAVDAIMLELDRGLTEPQIQVVCRQML 119
Query: 113 RGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
+ + HS R++HRDLK N+L+ + ++LADFG++ ++T
Sbjct: 120 EALNFLHSKRIIHRDLKAGNVLMTLEGD-IRLADFGVSAK---NLKTLQKRD-------- 167
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTP----VDVWSVGCIFAEMVN 228
SF + T ++ APE+++ TP D+WS+G EM
Sbjct: 168 --SF----------------IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ 209
Query: 229 QRP 231
P
Sbjct: 210 IEP 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 73/328 (22%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQED------EGVPSTAIREISLLK 56
+Y+ + IG G VV + + T A+K + + E E V RE +L+
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 57 EMQ-HGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDS--CPDFANDPRLIKTFLYQILR 113
++ H +I+ L D S ++LVF DL K + A + ++ + +L
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVF---DLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+++ H++ ++HRDLKP+N+L+D ++L+DFG + H G
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQ-IRLSDFGFS----------CHLEPGE------ 254
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTP-----VDVWSVGCIFAEMVN 228
+ R L G T Y APEIL S + P VD+W+ G I ++
Sbjct: 255 ----KLRELCG----------TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
Query: 229 QRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA 288
P F +I L I ++ + P+W + + V+
Sbjct: 301 GSPPFWHRRQILMLRMIME----------------GQYQFSSPEWDDR--SSTVK----- 337
Query: 289 GIDLLSKMLCMDPSRRITARSALEHEYF 316
DL+S++L +DP R+TA AL+H +F
Sbjct: 338 --DLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT+T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRTWT------------ 198
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
L G T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 199 --------LCG----------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 240 FADQPIQIYEKI 251
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 140/331 (42%), Gaps = 74/331 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQED---EGVPSTAI-REISLLKE 57
D Y+ E++G G + +V K R T A K I+ Q GV I RE+S+L++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+ H NI+ L DV + + L+ E + D +S + +F+ QIL
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----EEATSFIKQILD 126
Query: 114 GIAYCHSHRVLHRDLKPQN-LLIDRRTNA--LKLADFGLARAFGIPVRTFTHEHWGSTGI 170
G+ Y H+ ++ H DLKP+N +L+D+ +KL DFGLA H G+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-------------HEIEDGV 173
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
++ + G T + APEI + D+WS+G I +++
Sbjct: 174 E-------FKNIFG----------TPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLP-DFKSAFPKWPSKELGTVVRNLEPAG 289
F GD++ ++T +T++ DF F S EL
Sbjct: 216 SPFLGDTK---------------QETLANITAVSYDFDEEFFSQTS-ELAK--------- 250
Query: 290 IDLLSKMLCMDPSRRITARSALEHEYFRDVE 320
D + K+L + +R+T + AL H + V+
Sbjct: 251 -DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIR---EISLLKEM 58
D+YE E +G G V+ AR+ + +A+K +R + + PS +R E +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAAL 69
Query: 59 QHGNIVRLQDVVHSEKKL----YLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H IV + D +E Y+V EY+D + L+ + + + P+ + +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQ 127
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + H + ++HRD+KP N+LI TNA+K+ DFG+ARA
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISA-TNAVKVVDFGIARAIAD------------------ 168
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+G+ + Q V+ T Y +PE G DV+S+GC+ E++ P
Sbjct: 169 ---------SGNSVXQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
Query: 233 FPGDSEIDELFKIFR 247
F GDS + ++ R
Sbjct: 219 FTGDSPVSVAYQHVR 233
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 66/292 (22%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 80
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 138
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT+T
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRTWT------------ 183
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
L G T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 184 --------LCG----------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 224
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNL 285
D I KI V G K FP S +L ++RNL
Sbjct: 225 FADQPIQIYEKI--VSG----------------KVRFPSHFSSDLKDLLRNL 258
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 58/243 (23%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
+E V ++G+G +G VYKA+N T A K I + E+E I EI +L H I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE--LEDYIVEIEILATCDHPYI 78
Query: 64 VRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL-----------IKTFLYQIL 112
V+L + + KL+++ E+ CP A D + I+ Q+L
Sbjct: 79 VKLLGAYYHDGKLWIMIEF-----------CPGGAVDAIMLELDRGLTEPQIQVVCRQML 127
Query: 113 RGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
+ + HS R++HRDLK N+L+ + ++LADFG++ ++T
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEGD-IRLADFGVS---AKNLKTLQKRD-------- 175
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTP----VDVWSVGCIFAEMVN 228
SF + T ++ APE+++ TP D+WS+G EM
Sbjct: 176 --SF----------------IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ 217
Query: 229 QRP 231
P
Sbjct: 218 IEP 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 128/326 (39%), Gaps = 77/326 (23%)
Query: 6 KVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIV 64
K + +GEG++ + K + +N+ A+K I E + +EI+ LK + H NIV
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCEGHPNIV 69
Query: 65 RLQDVVHSEKKLYLVFEYLD-------LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
+L +V H + +LV E L+ + KKH + +++ +++
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETE--------ASYIMRKLVSAVSH 121
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNAL--KLADFGLAR---AFGIPVRTFTHEHWGSTGISI 172
H V+HRDLKP+NLL + L K+ DFG AR P++T
Sbjct: 122 MHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT------------- 168
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
TL Y APE LL Y D+WS+G I M++ +
Sbjct: 169 -------------------PCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQVP 208
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F + D TS + K G +N+ DL
Sbjct: 209 F------------------QSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250
Query: 293 LSKMLCMDPSRRITARSALEHEYFRD 318
+ +L +DP++R+ +E+ +D
Sbjct: 251 IQGLLTVDPNKRLKMSGLRYNEWLQD 276
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 132/326 (40%), Gaps = 70/326 (21%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN- 62
Y +++IG G V++ N + A+K + LE+ D + EI+ L ++Q +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 63 -IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
I+RL D +++ +Y+V E ++DL + DP K++ +L + H H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 146
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++H DLKP N LI LKL DFG+A +
Sbjct: 147 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTS---------------------- 182
Query: 182 LAGSLILQFLKVVTLWYRAPEI---LLGSRH-------YSTPVDVWSVGCIFAEMVNQRP 231
+++ +V T+ Y PE + SR S DVWS+GCI M +
Sbjct: 183 -----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
P I+++ K+ ++ P+ + FP P K+L D
Sbjct: 238 --PFQQIINQISKLHAIID-------------PNHEIEFPDIPEKDLQ-----------D 271
Query: 292 LLSKMLCMDPSRRITARSALEHEYFR 317
+L L DP +RI+ L H Y +
Sbjct: 272 VLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 129/326 (39%), Gaps = 70/326 (21%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN- 62
Y +++IG G V++ N + A+K + LE+ D + EI+ L ++Q +
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 63 -IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
I+RL D +++ +Y+V E ++DL + DP K++ +L + H H
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 126
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++H DLKP N LI LKL DFG+A + +
Sbjct: 127 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS----------------- 167
Query: 182 LAGSLILQFLKVVTLWYRAPEI---LLGSRHYS-------TPVDVWSVGCIFAEMVNQRP 231
+V T+ Y PE + SR DVWS+GCI M +
Sbjct: 168 ----------QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 217
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
P I+++ K+ ++ P+ + FP P K+L D
Sbjct: 218 --PFQQIINQISKLHAIID-------------PNHEIEFPDIPEKDLQ-----------D 251
Query: 292 LLSKMLCMDPSRRITARSALEHEYFR 317
+L L DP +RI+ L H Y +
Sbjct: 252 VLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 129/326 (39%), Gaps = 70/326 (21%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN- 62
Y +++IG G V++ N + A+K + LE+ D + EI+ L ++Q +
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 63 -IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
I+RL D +++ +Y+V E ++DL + DP K++ +L + H H
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 130
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++H DLKP N LI LKL DFG+A + +
Sbjct: 131 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDS----------------- 171
Query: 182 LAGSLILQFLKVVTLWYRAPEI---LLGSRHYS-------TPVDVWSVGCIFAEMVNQRP 231
+V T+ Y PE + SR DVWS+GCI M +
Sbjct: 172 ----------QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 221
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
P I+++ K+ ++ P+ + FP P K+L D
Sbjct: 222 --PFQQIINQISKLHAIID-------------PNHEIEFPDIPEKDLQ-----------D 255
Query: 292 LLSKMLCMDPSRRITARSALEHEYFR 317
+L L DP +RI+ L H Y +
Sbjct: 256 VLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIR---EISLLKEM 58
D+YE E +G G V+ AR+ + +A+K +R + + PS +R E +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAAL 69
Query: 59 QHGNIVRLQDVVHSEKKL----YLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H IV + D +E Y+V EY+D + L+ + + + P+ + +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQ 127
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + H + ++HRD+KP N++I TNA+K+ DFG+ARA
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIAD------------------ 168
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+G+ + Q V+ T Y +PE G DV+S+GC+ E++ P
Sbjct: 169 ---------SGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
Query: 233 FPGDSEIDELFKIFR 247
F GDS + ++ R
Sbjct: 219 FTGDSPVSVAYQHVR 233
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 130/326 (39%), Gaps = 70/326 (21%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH--G 61
Y +++IG G V++ N + A+K + LE+ D + EI+ L ++Q
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
I+RL D +++ +Y+V E ++DL + DP K++ +L + H H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 174
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++H DLKP N LI LKL DFG+A +
Sbjct: 175 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTS---------------------- 210
Query: 182 LAGSLILQFLKVVTLWYRAPEI---LLGSRHYS-------TPVDVWSVGCIFAEMVNQRP 231
+++ +V T+ Y PE + SR DVWS+GCI M +
Sbjct: 211 -----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
P I+++ K+ ++ P+ + FP P K+L D
Sbjct: 266 --PFQQIINQISKLHAIID-------------PNHEIEFPDIPEKDLQ-----------D 299
Query: 292 LLSKMLCMDPSRRITARSALEHEYFR 317
+L L DP +RI+ L H Y +
Sbjct: 300 VLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 58/245 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D +E + ++G+G +G VYKA+N T+ A K I + E+E + EI +L H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHP 94
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL-----------IKTFLYQ 110
NIV+L D + E L+++ E+ C A D + I+ Q
Sbjct: 95 NIVKLLDAFYYENNLWILIEF-----------CAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
L + Y H ++++HRDLK N+L + +KLADFG++ ++
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGD-IKLADFGVSAKNTRXIQ------------ 190
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILL----GSRHYSTPVDVWSVGCIFAEM 226
R G T ++ APE+++ R Y DVWS+G EM
Sbjct: 191 -------RRDXFIG----------TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 227 VNQRP 231
P
Sbjct: 234 AEIEP 238
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 131/326 (40%), Gaps = 70/326 (21%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN- 62
Y +++IG G V++ N + A+K + LE+ D + EI+ L ++Q +
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 63 -IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
I+RL D +++ +Y+V E ++DL + DP K++ +L + H H
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 127
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++H DLKP N LI LKL DFG+A +
Sbjct: 128 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTS---------------------- 163
Query: 182 LAGSLILQFLKVVTLWYRAPEI---LLGSRHYS-------TPVDVWSVGCIFAEMVNQRP 231
+++ +V T+ Y PE + SR DVWS+GCI M +
Sbjct: 164 -----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 218
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
P I+++ K+ ++ P+ + FP P K+L D
Sbjct: 219 --PFQQIINQISKLHAIID-------------PNHEIEFPDIPEKDLQ-----------D 252
Query: 292 LLSKMLCMDPSRRITARSALEHEYFR 317
+L L DP +RI+ L H Y +
Sbjct: 253 VLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 130/326 (39%), Gaps = 70/326 (21%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH--G 61
Y +++IG G V++ N + A+K + LE+ D + EI+ L ++Q
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
I+RL D +++ +Y+V E ++DL + DP K++ +L + H H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 174
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++H DLKP N LI LKL DFG+A +
Sbjct: 175 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTS---------------------- 210
Query: 182 LAGSLILQFLKVVTLWYRAPEI---LLGSRHYS-------TPVDVWSVGCIFAEMVNQRP 231
+++ +V T+ Y PE + SR DVWS+GCI M +
Sbjct: 211 -----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
F I+++ K+ ++ P+ + FP P K+L D
Sbjct: 266 PF--QQIINQISKLHAIID-------------PNHEIEFPDIPEKDLQ-----------D 299
Query: 292 LLSKMLCMDPSRRITARSALEHEYFR 317
+L L DP +RI+ L H Y +
Sbjct: 300 VLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIR---EISLLKEM 58
D+YE E +G G V+ AR+ + +A+K +R + + PS +R E +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD--PSFYLRFRREAQNAAAL 69
Query: 59 QHGNIVRLQDVVHSEKKL----YLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H IV + D +E Y+V EY+D + L+ + + + P+ + +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQ 127
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + H + ++HRD+KP N++I TNA+K+ DFG+ARA
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIAD------------------ 168
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+G+ + Q V+ T Y +PE G DV+S+GC+ E++ P
Sbjct: 169 ---------SGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
Query: 233 FPGDSEIDELFKIFR 247
F GDS + ++ R
Sbjct: 219 FTGDSPVSVAYQHVR 233
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 79/291 (27%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ--------------------- 39
++QY ++IG+G+YGVV A N N A+K + ++
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 40 ---EDEGVPSTAIREISLLKEMQHGNIVRLQDVVH--SEKKLYLVFEYLDLDLKKHMDSC 94
+ G +EI++LK++ H N+V+L +V+ +E LY+VFE ++ + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 95 PDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154
+ D + + +++GI Y H +++HRD+KP NLL+ + +K+ADFG++ F
Sbjct: 132 KPLSEDQA--RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH-IKIADFGVSNEF- 187
Query: 155 IPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHY--ST 212
GS L V T + APE L +R
Sbjct: 188 ----------------------------KGSDALLSNTVGTPAFMAPESLSETRKIFSGK 219
Query: 213 PVDVWSVG-------------------CIFAEMVNQRPLFPGDSEIDELFK 244
+DVW++G C+ +++ +Q FP +I E K
Sbjct: 220 ALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLK 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+ ++G+G +G V Y T E +A+KK L+ E REI +LK +QH N
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
IV+ + V +S + L L+ E+L L++++ + + +L++ + QI +G+ Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ-YTSQICKGMEYLG 134
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R +HRDL +N+L++ N +K+ DFGL + + G + I
Sbjct: 135 TKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--------- 184
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L S+ +S DVWS G + E+
Sbjct: 185 ----------------FWY-APESLTESK-FSVASDVWSFGVVLYEL 213
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 239 FADQPIQIYEKI 250
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 239 FADQPIQIYEKI 250
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 240 FADQPIQIYEKI 251
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 239 FADQPIQIYEKI 250
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 80/326 (24%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIA----LKKIRLEQEDEGVPSTAIREISLLK 56
M +Y + +G+G + Y+ + T E A K + L+ + ST EI++ K
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST---EIAIHK 97
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFE------YLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
+ + ++V + +Y+V E L+L ++ + P+ + F+ Q
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE-------ARYFMRQ 150
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
++G+ Y H++RV+HRDLK NL ++ + +K+ DFGLA
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLA-------------------T 190
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
I F R + L G T Y APE+L H S VD+WS+GCI ++ +
Sbjct: 191 KIEFDGERKKTLCG----------TPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGK 239
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
P F + +I + NE + P R++ P
Sbjct: 240 PPFETSCLKETYIRIKK-----NEYSVP------------------------RHINPVAS 270
Query: 291 DLLSKMLCMDPSRRITARSALEHEYF 316
L+ +ML DP+ R + L E+F
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIR---EISLLKEM 58
D+YE E +G G V+ AR+ + +A+K +R + + PS +R E +
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD--PSFYLRFRREAQNAAAL 86
Query: 59 QHGNIVRLQDVVHSEKKL----YLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H IV + D +E Y+V EY+D + L+ + + + P+ + +
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQ 144
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + H + ++HRD+KP N++I TNA+K+ DFG+ARA
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIAD------------------ 185
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+G+ + Q V+ T Y +PE G DV+S+GC+ E++ P
Sbjct: 186 ---------SGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 235
Query: 233 FPGDSEIDELFKIFR 247
F GDS + ++ R
Sbjct: 236 FTGDSPVSVAYQHVR 250
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 66/292 (22%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNL 285
D I KI V G K FP S +L ++RNL
Sbjct: 239 FADQPIQIYEKI--VSG----------------KVRFPSHFSSDLKDLLRNL 272
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 66/292 (22%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNL 285
D I KI V G K FP S +L ++RNL
Sbjct: 239 FADQPIQIYEKI--VSG----------------KVRFPSHFSSDLKDLLRNL 272
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 46/251 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK-----KIRLEQEDEGVPSTAIREISLL 55
+DQ+E+++ +G G++G V ++ T A+K K+ +E E + E +L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIE----HTLNEKRIL 95
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
+ + +V+L+ LY+V EY ++ H+ F+ +P + + QI+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVLT 153
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
Y HS +++RDLKP+NL+ID++ +K+ DFGLA+ + RT W G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGLAKR--VKGRT-----WXLCG----- 200
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 --------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 235 GDSEIDELFKI 245
D I KI
Sbjct: 240 ADQPIQIYEKI 250
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 130/326 (39%), Gaps = 70/326 (21%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH--G 61
Y +++IG G V++ N + A+K + LE+ D + EI+ L ++Q
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
I+RL D +++ +Y+V E ++DL + DP K++ +L + H H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 146
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++H DLKP N LI LKL DFG+A
Sbjct: 147 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDXXX---------------------- 182
Query: 182 LAGSLILQFLKVVTLWYRAPEI---LLGSRH-------YSTPVDVWSVGCIFAEMVNQRP 231
+++ +V T+ Y PE + SR S DVWS+GCI M +
Sbjct: 183 -----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
P I+++ K+ ++ P+ + FP P K+L D
Sbjct: 238 --PFQQIINQISKLHAIID-------------PNHEIEFPDIPEKDLQ-----------D 271
Query: 292 LLSKMLCMDPSRRITARSALEHEYFR 317
+L L DP +RI+ L H Y +
Sbjct: 272 VLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NL+ID++ +K+ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 239 FADQPIQIYEKI 250
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 39/244 (15%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD-FANDPRLIKTFLYQILRGI 115
G ++RL D L+ E ++ ++ D + A L ++F +Q+L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERME-PVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
+CH+ VLHRD+K +N+LID LKL DFG ++Y
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDTVYTD 172
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
F RV Y PE + R++ VWS+G + +MV F
Sbjct: 173 FDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
Query: 236 DSEI 239
D EI
Sbjct: 217 DEEI 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 115
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 173
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 221
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 222 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 260 FADQPIQIYEKI 271
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 66/292 (22%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 87
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 145
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 193
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 194 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNL 285
D I KI V G K FP S +L ++RNL
Sbjct: 232 FADQPIQIYEKI--VSG----------------KVRFPSHFSSDLKDLLRNL 265
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 47/286 (16%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNET------IALKKIRLEQEDEGVPSTAIREISLLK 56
Q+E ++ +G+G++G V+ + ++ LKK L+ D V + R+I L
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDI--LV 82
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
E+ H IV+L +E KLYL+ ++L DL + F + +K +L ++ +
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED--VKFYLAELALAL 140
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
+ HS +++RDLKP+N+L+D + +KL DFGL++ + HE +S
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSK------ESIDHEKKA-------YS 186
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
F T+ Y APE+ + R ++ D WS G + EM+ F G
Sbjct: 187 F----------------CGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 229
Query: 236 DSEIDELFKIFRV-LGTPNEDTWPGVTSLPDFKSAFPKWPSKELGT 280
+ + I + LG P + P SL + F + P+ LG
Sbjct: 230 KDRKETMTMILKAKLGMP-QFLSPEAQSL--LRMLFKRNPANRLGA 272
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 80/326 (24%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIA----LKKIRLEQEDEGVPSTAIREISLLK 56
M +Y + +G+G + Y+ + T E A K + L+ + ST EI++ K
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST---EIAIHK 97
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFE------YLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
+ + ++V + +Y+V E L+L ++ + P+ + F+ Q
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE-------ARYFMRQ 150
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
++G+ Y H++RV+HRDLK NL ++ + +K+ DFGLA
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLA-------------------T 190
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
I F R + L G T Y APE+L H S VD+WS+GCI ++ +
Sbjct: 191 KIEFDGERKKXLCG----------TPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGK 239
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
P F + +I + NE + P R++ P
Sbjct: 240 PPFETSCLKETYIRIKK-----NEYSVP------------------------RHINPVAS 270
Query: 291 DLLSKMLCMDPSRRITARSALEHEYF 316
L+ +ML DP+ R + L E+F
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 47/286 (16%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNET------IALKKIRLEQEDEGVPSTAIREISLLK 56
Q+E ++ +G+G++G V+ + ++ LKK L+ D V + R+I L
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDI--LV 81
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
E+ H IV+L +E KLYL+ ++L DL + F + +K +L ++ +
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED--VKFYLAELALAL 139
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
+ HS +++RDLKP+N+L+D + +KL DFGL++ + HE +S
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSK------ESIDHEKKA-------YS 185
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
F T+ Y APE+ + R ++ D WS G + EM+ F G
Sbjct: 186 F----------------CGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
Query: 236 DSEIDELFKIFRV-LGTPNEDTWPGVTSLPDFKSAFPKWPSKELGT 280
+ + I + LG P + P SL + F + P+ LG
Sbjct: 229 KDRKETMTMILKAKLGMP-QFLSPEAQSL--LRMLFKRNPANRLGA 271
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 240 FADQPIQIYEKI 251
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 239 FADQPIQIYEKI 250
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 240 FADQPIQIYEKI 251
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 240 FADQPIQIYEKI 251
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 66/292 (22%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNL 285
D I KI V G K FP S +L ++RNL
Sbjct: 240 FADQPIQIYEKI--VSG----------------KVRFPSHFSSDLKDLLRNL 273
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NL+ID++ +K+ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEI 239
D I
Sbjct: 240 FADQPI 245
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 135/319 (42%), Gaps = 67/319 (21%)
Query: 10 IGEGTYG-VVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQ 67
+G G G +VY R N +A+K+I E S A RE+ LL+E +H N++R
Sbjct: 32 LGHGAEGTIVY--RGMFDNRDVAVKRILPE-----CFSFADREVQLLRESDEHPNVIRYF 84
Query: 68 DVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
+ Y+ E L+++++ DFA+ T L Q G+A+ HS ++HRD
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRD 143
Query: 128 LKPQNLLIDRRTNALK----LADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
LKP N+LI K ++DFGL + + +F+ G G
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS-GVPG-------------- 188
Query: 184 GSLILQFLKVVTLWYRAPEILL--GSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDE 241
T + APE+L + + VD++S GC+F ++++ P +
Sbjct: 189 -----------TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS-HPFGKSLQR 236
Query: 242 LFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDP 301
I +LG + D P K + R +L+ KM+ MDP
Sbjct: 237 QANI--LLGACSLDCL---------------HPEKHEDVIAR-------ELIEKMIAMDP 272
Query: 302 SRRITARSALEHEYFRDVE 320
+R +A+ L+H +F +E
Sbjct: 273 QKRPSAKHVLKHPFFWSLE 291
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY ++ H+ F +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NL+ID++ +K+ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 119
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 120 LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 164
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 165 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 209 PFEHDEEI 216
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 66/292 (22%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 87
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 145
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 193
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 194 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNL 285
D I KI V G K FP S +L ++RNL
Sbjct: 232 FADQPIQIYEKI--VSG----------------KVRFPSHFSSDLKDLLRNL 265
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 47/286 (16%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNET------IALKKIRLEQEDEGVPSTAIREISLLK 56
Q+E ++ +G+G++G V+ + ++ LKK L+ D V + R+I L
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDI--LV 81
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
E+ H IV+L +E KLYL+ ++L DL + F + +K +L ++ +
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED--VKFYLAELALAL 139
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
+ HS +++RDLKP+N+L+D + +KL DFGL++ + HE +S
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSK------ESIDHEKKA-------YS 185
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
F T+ Y APE+ + R ++ D WS G + EM+ F G
Sbjct: 186 F----------------CGTVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
Query: 236 DSEIDELFKIFRV-LGTPNEDTWPGVTSLPDFKSAFPKWPSKELGT 280
+ + I + LG P + P SL + F + P+ LG
Sbjct: 229 KDRKETMTMILKAKLGMP-QFLSPEAQSL--LRMLFKRNPANRLGA 271
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
+ + +V+L+ LY+V EY ++ H+ F+ +P + + QI+
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +K+ADFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIKVADFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEI 239
D I
Sbjct: 240 FADQPI 245
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 50/316 (15%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH--G 61
Y +++IG G V++ N + A+K + LE+ D + EI+ L ++Q
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
I+RL D +++ +Y+V E ++DL + DP K++ +L + H H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 174
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
++H DLKP N LI LKL DFG+A + + G Y +
Sbjct: 175 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKD--SQVGAVNYMPPEAIKD 230
Query: 182 LAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDE 241
++ S E S DVWS+GCI M + F I++
Sbjct: 231 MSSSR---------------ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQ 273
Query: 242 LFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDP 301
+ K+ ++ P+ + FP P K+L D+L L DP
Sbjct: 274 ISKLHAIID-------------PNHEIEFPDIPEKDLQ-----------DVLKCCLKRDP 309
Query: 302 SRRITARSALEHEYFR 317
+RI+ L H Y +
Sbjct: 310 KQRISIPELLAHPYVQ 325
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 42/245 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIR---EISLLKEM 58
D+YE E +G G V+ AR+ + +A+K +R + + PS +R E +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAAL 69
Query: 59 QHGNIVRLQDVVHSEKKL----YLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H IV + D +E Y+V EY+D + L+ + + + P+ + +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQ 127
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + H + ++HRD+KP N++I TNA+K+ DFG+ARA
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIAD------------------ 168
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+G+ + Q V+ T Y +PE G DV+S+GC+ E++ P
Sbjct: 169 ---------SGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
Query: 233 FPGDS 237
F GDS
Sbjct: 219 FTGDS 223
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 101/229 (44%), Gaps = 40/229 (17%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIR--LEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
K+GEG +GVVYK V N T+A+KK+ ++ E + +EI ++ + QH N+V L
Sbjct: 38 KMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 67 QDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L LV+ Y+ LD +D P + R GI + H +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC--KIAQGAANGINFLHENH 153
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRD+K N+L+D A K++DFGLARA E + T + R++
Sbjct: 154 HIHRDIKSANILLDEAFTA-KISDFGLARA---------SEKFAQT-------VMXXRIV 196
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
T Y APE L G + D++S G + E++ P
Sbjct: 197 G-----------TTAYMAPEALRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 80/326 (24%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIA----LKKIRLEQEDEGVPSTAIREISLLK 56
M +Y + +G+G + Y+ + T E A K + L+ + ST EI++ K
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST---EIAIHK 97
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFE------YLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
+ + ++V + +Y+V E L+L ++ + P+ + F+ Q
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE-------ARYFMRQ 150
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
++G+ Y H++RV+HRDLK NL ++ + +K+ DFGLA
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLA-------------------T 190
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
I F R + L G T Y APE+L H S VD+WS+GCI ++ +
Sbjct: 191 KIEFDGERKKDLCG----------TPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGK 239
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
P F + +I + NE + P R++ P
Sbjct: 240 PPFETSCLKETYIRIKK-----NEYSVP------------------------RHINPVAS 270
Query: 291 DLLSKMLCMDPSRRITARSALEHEYF 316
L+ +ML DP+ R + L E+F
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 46/251 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK-----KIRLEQEDEGVPSTAIREISLL 55
+DQ+E+++ +G G++G V ++ T A+K K+ +E E + E +L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIE----HTLNEKRIL 95
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
+ + +V+L+ LY+V EY ++ H+ F+ +P + + QI+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVLT 153
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
Y HS +++RDLKP+NL+ID++ +++ DFGLA+ + RT W G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQ-GYIQVTDFGLAKR--VKGRT-----WXLCG----- 200
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 --------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
Query: 235 GDSEIDELFKI 245
D I KI
Sbjct: 240 ADQPIQIYEKI 250
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 119
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 164
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 165 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 209 PFEHDEEI 216
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 80/326 (24%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIA----LKKIRLEQEDEGVPSTAIREISLLK 56
M +Y + +G+G + Y+ + T E A K + L+ + ST EI++ K
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST---EIAIHK 81
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFE------YLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
+ + ++V + +Y+V E L+L ++ + P+ + F+ Q
Sbjct: 82 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE-------ARYFMRQ 134
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
++G+ Y H++RV+HRDLK NL ++ + +K+ DFGLA
Sbjct: 135 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMD-VKIGDFGLA-------------------T 174
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR 230
I F R + L G T Y APE+L H S VD+WS+GCI ++ +
Sbjct: 175 KIEFDGERKKDLCG----------TPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGK 223
Query: 231 PLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGI 290
P F + +I + NE + P R++ P
Sbjct: 224 PPFETSCLKETYIRIKK-----NEYSVP------------------------RHINPVAS 254
Query: 291 DLLSKMLCMDPSRRITARSALEHEYF 316
L+ +ML DP+ R + L E+F
Sbjct: 255 ALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 146
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 147 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 191
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 192 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 235
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 236 PFEHDEEI 243
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NL+ID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 239 FADQPIQIYEKI 250
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 101/229 (44%), Gaps = 40/229 (17%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIR--LEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
K+GEG +GVVYK V N T+A+KK+ ++ E + +EI ++ + QH N+V L
Sbjct: 38 KMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 67 QDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L LV+ Y+ LD +D P + R GI + H +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC--KIAQGAANGINFLHENH 153
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRD+K N+L+D A K++DFGLARA E + T + R++
Sbjct: 154 HIHRDIKSANILLDEAFTA-KISDFGLARA---------SEKFAQT-------VMXSRIV 196
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
T Y APE L G + D++S G + E++ P
Sbjct: 197 G-----------TTAYMAPEALRG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 119
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 164
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 165 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 209 PFEHDEEI 216
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + + +L+ LY+V EY ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NL+ID++ +K+ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 240 FADQPIQIYEKI 251
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 184
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 185 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 229 PFEHDEEI 236
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 158
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 203
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 204 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 248 PFEHDEEI 255
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 168
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 169 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 213 PFEHDEEI 220
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 184
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 185 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 229 PFEHDEEI 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 197
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 198 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 242 PFEHDEEI 249
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + + +L+ LY+V EY ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NL+ID++ +K+ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEI 239
D I
Sbjct: 240 FADQPI 245
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 197
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 198 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 242 PFEHDEEI 249
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 169
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 170 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 214 PFEHDEEI 221
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 196
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 197 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 241 PFEHDEEI 248
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 196
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 197 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 241 PFEHDEEI 248
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 169
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 170 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 214 PFEHDEEI 221
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 138
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 183
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 184 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 228 PFEHDEEI 235
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 167
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 168 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 211
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 212 PFEHDEEI 219
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 196
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 197 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 241 PFEHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 197
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 198 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 242 PFEHDEEI 249
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 169
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 170 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 214 PFEHDEEI 221
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 138
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 183
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 184 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 228 PFEHDEEI 235
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 184
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 185 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 229 PFEHDEEI 236
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 197
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 198 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 242 PFEHDEEI 249
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 211
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 212 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 256 PFEHDEEI 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 171
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 172 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 216
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 217 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 260
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 261 PFEHDEEI 268
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRTWX------------ 197
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
LAG T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 198 --------LAG----------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 211
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 212 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 256 PFEHDEEI 263
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 69/312 (22%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIGEG+ G+V A + + +A+KK+ L ++ E+ ++++ QH N+V + +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 95
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHSHRVL 124
+L++V E+L+ + D R+ I +L+ ++ H+ V+
Sbjct: 96 SYLVGDELWVVMEFLE------GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRD+K ++L+ +KL+DFG + R + L G
Sbjct: 150 HRDIKSDSILLT-HDGRVKLSDFGFC-------------------AQVSKEVPRRKXLVG 189
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFK 244
T ++ APE L+ Y VD+WS+G + EMV+ P + + + + K
Sbjct: 190 ----------TPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-K 237
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
+ R D P P K+ + + P+ L ++L DP++R
Sbjct: 238 MIR-------DNLP-----PRLKN-------------LHKVSPSLKGFLDRLLVRDPAQR 272
Query: 305 ITARSALEHEYF 316
TA L+H +
Sbjct: 273 ATAAELLKHPFL 284
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIR---EISLLKEM 58
QY+ +G G +G VY N +A+K + ++ D G R E+ LLK++
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 59 QHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRLIKTFLYQI 111
G ++RL D L+ E + + DF A L ++F +Q+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
L + +CH+ VLHRD+K +N+LID LKL DFG +
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------------KDT 196
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
+Y F RV Y PE + R++ VWS+G + +MV
Sbjct: 197 VYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 232 LFPGDSEI 239
F D EI
Sbjct: 241 PFEHDEEI 248
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 69/312 (22%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIGEG+ G+V A + + +A+KK+ L ++ E+ ++++ QH N+V + +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 88
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHSHRVL 124
+L++V E+L+ + D R+ I +L+ ++ H+ V+
Sbjct: 89 SYLVGDELWVVMEFLE------GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRD+K ++L+ +KL+DFG + R + L G
Sbjct: 143 HRDIKSDSILLT-HDGRVKLSDFGFC-------------------AQVSKEVPRRKXLVG 182
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFK 244
T ++ APE L+ Y VD+WS+G + EMV+ P + + + + K
Sbjct: 183 ----------TPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-K 230
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
+ R D P P K+ + + P+ L ++L DP++R
Sbjct: 231 MIR-------DNLP-----PRLKN-------------LHKVSPSLKGFLDRLLVRDPAQR 265
Query: 305 ITARSALEHEYF 316
TA L+H +
Sbjct: 266 ATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 69/312 (22%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIGEG+ G+V A + + +A+KK+ L ++ E+ ++++ QH N+V + +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 84
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHSHRVL 124
+L++V E+L+ + D R+ I +L+ ++ H+ V+
Sbjct: 85 SYLVGDELWVVMEFLE------GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRD+K ++L+ +KL+DFG + R + L G
Sbjct: 139 HRDIKSDSILLT-HDGRVKLSDFGFC-------------------AQVSKEVPRRKXLVG 178
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFK 244
T ++ APE L+ Y VD+WS+G + EMV+ P + + + + K
Sbjct: 179 ----------TPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-K 226
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
+ R D P P K+ + + P+ L ++L DP++R
Sbjct: 227 MIR-------DNLP-----PRLKN-------------LHKVSPSLKGFLDRLLVRDPAQR 261
Query: 305 ITARSALEHEYF 316
TA L+H +
Sbjct: 262 ATAAELLKHPFL 273
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ FA +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFA-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 69/312 (22%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIGEG+ G+V A + + +A+KK+ L ++ E+ ++++ QH N+V + +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 93
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHSHRVL 124
+L++V E+L+ + D R+ I +L+ ++ H+ V+
Sbjct: 94 SYLVGDELWVVMEFLE------GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRD+K ++L+ +KL+DFG + R + L G
Sbjct: 148 HRDIKSDSILLT-HDGRVKLSDFGFC-------------------AQVSKEVPRRKXLVG 187
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFK 244
T ++ APE L+ Y VD+WS+G + EMV+ P + + + + K
Sbjct: 188 ----------TPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-K 235
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
+ R D P P K+ + + P+ L ++L DP++R
Sbjct: 236 MIR-------DNLP-----PRLKN-------------LHKVSPSLKGFLDRLLVRDPAQR 270
Query: 305 ITARSALEHEYF 316
TA L+H +
Sbjct: 271 ATAAELLKHPFL 282
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 69/312 (22%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIGEG+ G+V A + + +A+KK+ L ++ E+ ++++ QH N+V + +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 138
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHSHRVL 124
+L++V E+L+ + D R+ I +L+ ++ H+ V+
Sbjct: 139 SYLVGDELWVVMEFLE------GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 192
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRD+K ++L+ +KL+DFG + R + L G
Sbjct: 193 HRDIKSDSILLT-HDGRVKLSDFGFC-------------------AQVSKEVPRRKXLVG 232
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFK 244
T ++ APE L+ Y VD+WS+G + EMV+ P + + + + K
Sbjct: 233 ----------TPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-K 280
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
+ R D P P K+ + + P+ L ++L DP++R
Sbjct: 281 MIR-------DNLP-----PRLKN-------------LHKVSPSLKGFLDRLLVRDPAQR 315
Query: 305 ITARSALEHEYF 316
TA L+H +
Sbjct: 316 ATAAELLKHPFL 327
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+E+++ +G G++G V ++ T A+K ++L+Q + + E +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + + +L+ LY+V EY ++ H+ F +P + + QI+
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NL+ID++ +K+ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQ-GYIKVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEI 239
D I
Sbjct: 240 FADQPI 245
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 107/238 (44%), Gaps = 42/238 (17%)
Query: 5 EKVEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+K+ +GEG +G V Y N T E +A+K ++ E + S REI +L+ + H
Sbjct: 11 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYH 69
Query: 61 GNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
+IV+ + EK + LV EY+ L + D P + F QI G+AY
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR--DYLPRHCVGLAQLLLFAQQICEGMAYL 127
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H+ +HR L +N+L+D +K+ DFGLA+A +P HE++ R
Sbjct: 128 HAQHYIHRALAARNVLLD-NDRLVKIGDFGLAKA--VPE---GHEYY------------R 169
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-----NQRP 231
R S + WY APE L + Y DVWS G E++ NQ P
Sbjct: 170 VREDGDSPV--------FWY-APECLKECKFYYAS-DVWSFGVTLYELLTYCDSNQSP 217
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 107/238 (44%), Gaps = 42/238 (17%)
Query: 5 EKVEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+K+ +GEG +G V Y N T E +A+K ++ E + S REI +L+ + H
Sbjct: 12 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYH 70
Query: 61 GNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
+IV+ + EK + LV EY+ L + D P + F QI G+AY
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR--DYLPRHCVGLAQLLLFAQQICEGMAYL 128
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H+ +HR L +N+L+D +K+ DFGLA+A +P HE++ R
Sbjct: 129 HAQHYIHRALAARNVLLD-NDRLVKIGDFGLAKA--VPE---GHEYY------------R 170
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-----NQRP 231
R S + WY APE L + Y DVWS G E++ NQ P
Sbjct: 171 VREDGDSPV--------FWY-APECLKECKFYYAS-DVWSFGVTLYELLTYCDSNQSP 218
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + +E + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 207
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 208 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 47/286 (16%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNET------IALKKIRLEQEDEGVPSTAIREISLLK 56
+E ++ +G+G++G V+ R ++ LKK L+ D V + R+I L
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR-VRTKMERDI--LA 85
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
++ H +V+L +E KLYL+ ++L DL + F + +K +L ++ G+
Sbjct: 86 DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED--VKFYLAELALGL 143
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
+ HS +++RDLKP+N+L+D + +KL DFGL++ HE +S
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSK------EAIDHEKKA-------YS 189
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
F T+ Y APE++ H S D WS G + EM+ F G
Sbjct: 190 F----------------CGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLPFQG 232
Query: 236 DSEIDELFKIFRV-LGTPNEDTWPGVTSLPDFKSAFPKWPSKELGT 280
+ + I + LG P + + ++ F + P+ LG+
Sbjct: 233 KDRKETMTLILKAKLGMPQ---FLSTEAQSLLRALFKRNPANRLGS 275
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 70/320 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+G+G++G V A T E A+K ++ + +D+ V T + + L + + +L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 68 DVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
+ +LY V EY++ DL H+ F +P+ + + +I G+ + H +++R
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKF-KEPQAV-FYAAEISIGLFFLHKRGIIYR 144
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+++D + +K+ADFG+ + EH ++ G
Sbjct: 145 DLKLDNVMLDSEGH-IKIADFGMCK-----------EH----------------MMDGVT 176
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
+F T Y APEI+ + Y VD W+ G + EM+ +P F G+ E DELF+
Sbjct: 177 TREFCG--TPDYIAPEII-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQ-- 230
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRIT 306
S+ + ++PK SKE ++ + L + P++R+
Sbjct: 231 ---------------SIMEHNVSYPKSLSKEAVSICKGL-----------MTKHPAKRLG 264
Query: 307 A-----RSALEHEYFRDVEF 321
R EH +FR +++
Sbjct: 265 CGPEGERDVREHAFFRRIDW 284
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 42/255 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIR---EISLLKEM 58
D+YE E +G G V+ AR+ + +A+K +R + + PS +R E +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD--PSFYLRFRREAQNAAAL 69
Query: 59 QHGNIVRLQDVVHSEKKL----YLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILR 113
H IV + +E Y+V EY+D + L+ + + + P+ + +
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQ 127
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + H + ++HRD+KP N++I TNA+K+ DFG+ARA
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIAD------------------ 168
Query: 174 FSFLRYRVLAGSLILQFLKVV-TLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
+G+ + Q V+ T Y +PE G DV+S+GC+ E++ P
Sbjct: 169 ---------SGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
Query: 233 FPGDSEIDELFKIFR 247
F GDS + ++ R
Sbjct: 219 FTGDSPVSVAYQHVR 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 52/237 (21%)
Query: 8 EKIGE-GTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
E IGE G +G VYKA+N T+ A K I + E+E + EI +L H NIV+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPNIVKL 72
Query: 67 QDVVHSEKKLYLVFEYLD--------LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
D + E L+++ E+ L+L++ + I+ Q L + Y
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ--------IQVVCKQTLDALNYL 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H ++++HRDLK N+L + +KLADFG++ T I SF
Sbjct: 125 HDNKIIHRDLKAGNILFTLDGD-IKLADFGVSAKNT------------RTXIQRRDSF-- 169
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILL----GSRHYSTPVDVWSVGCIFAEMVNQRP 231
+ T ++ APE+++ R Y DVWS+G EM P
Sbjct: 170 --------------IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 69/312 (22%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIGEG+ G+V A + + +A+KK+ L ++ E+ ++++ QH N+V + +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 215
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRL----IKTFLYQILRGIAYCHSHRVL 124
+L++V E+L+ + D R+ I +L+ ++ H+ V+
Sbjct: 216 SYLVGDELWVVMEFLE------GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRD+K ++L+ +KL+DFG + R + L G
Sbjct: 270 HRDIKSDSILLT-HDGRVKLSDFGFC-------------------AQVSKEVPRRKXLVG 309
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFK 244
T ++ APE L+ Y VD+WS+G + EMV+ P + + + + K
Sbjct: 310 ----------TPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-K 357
Query: 245 IFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRR 304
+ R D P P K+ + + P+ L ++L DP++R
Sbjct: 358 MIR-------DNLP-----PRLKN-------------LHKVSPSLKGFLDRLLVRDPAQR 392
Query: 305 ITARSALEHEYF 316
TA L+H +
Sbjct: 393 ATAAELLKHPFL 404
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 115
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 173
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAK---------------------- 210
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
RV + L T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 211 ------RVKGATWTL----CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 260 FADQPIQIYEKI 271
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLXG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 40/229 (17%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIR--LEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
K+GEG +GVVYK V N T+A+KK+ ++ E + +EI ++ + QH N+V L
Sbjct: 32 KMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 67 QDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L LV+ Y+ LD +D P + R GI + H +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC--KIAQGAANGINFLHENH 147
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRD+K N+L+D A K++DFGLARA S F+
Sbjct: 148 HIHRDIKSANILLDEAFTA-KISDFGLARA------------------SEKFA------- 181
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
++ V T Y APE L G + D++S G + E++ P
Sbjct: 182 --QXVMXXRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 5 EKVEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+K+ +GEG +G V Y N T E +A+K ++ + + S +EI +L+ + H
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR-SGWKQEIDILRTLYH 75
Query: 61 GNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
+I++ + EK L LV EY+ L + D P + + F QI G+AY
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR--DYLPRHSIGLAQLLLFAQQICEGMAYL 133
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
HS +HR+L +N+L+D +K+ DFGLA+A +P HE++ R
Sbjct: 134 HSQHYIHRNLAARNVLLD-NDRLVKIGDFGLAKA--VPE---GHEYY------------R 175
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
R S + WY APE L + Y DVWS G E++
Sbjct: 176 VREDGDSPV--------FWY-APECLKEYKFYYAS-DVWSFGVTLYELLTH 216
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 95
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 201
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 202 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 234 PGDSEI 239
D I
Sbjct: 240 FADQPI 245
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 239 FADQPIQIYEKI 250
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADEPI 244
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 66/292 (22%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 81
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 139
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID + +++ DFG A+ + RT W G
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLIDEQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 187
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 188 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 225
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNL 285
D I KI V G K FP S +L ++RNL
Sbjct: 226 FADQPIQIYEKI--VSG----------------KVRFPSHFSSDLKDLLRNL 259
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 73/272 (26%)
Query: 51 EISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLI 104
EIS+ + + H ++V +++V E L+L ++ + P+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE-------A 143
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ +L QI+ G Y H +RV+HRDLK NL ++ +K+ DFGLA
Sbjct: 144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLA-------------- 188
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
+ + R +VL G T Y APE+ L + +S VDVWS+GCI
Sbjct: 189 -----TKVEYDGERKKVLCG----------TPNYIAPEV-LSKKGHSFEVDVWSIGCIMY 232
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ +P F + +I + NE + P ++
Sbjct: 233 TLLVGKPPFETSCLKETYLRIKK-----NEYSIP------------------------KH 263
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
+ P L+ KML DP+ R T L E+F
Sbjct: 264 INPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 115
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 173
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 221
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 222 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 260 FADQPIQIYEKI 271
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 73/272 (26%)
Query: 51 EISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLI 104
EIS+ + + H ++V +++V E L+L ++ + P+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE-------A 141
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ +L QI+ G Y H +RV+HRDLK NL ++ +K+ DFGLA
Sbjct: 142 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLA-------------- 186
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
+ + R +VL G T Y APE+ L + +S VDVWS+GCI
Sbjct: 187 -----TKVEYDGERKKVLCG----------TPNYIAPEV-LSKKGHSFEVDVWSIGCIMY 230
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ +P F + +I + NE + P ++
Sbjct: 231 TLLVGKPPFETSCLKETYLRIKK-----NEYSIP------------------------KH 261
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
+ P L+ KML DP+ R T L E+F
Sbjct: 262 INPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 73/272 (26%)
Query: 51 EISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLI 104
EIS+ + + H ++V +++V E L+L ++ + P+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE-------A 117
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ +L QI+ G Y H +RV+HRDLK NL ++ +K+ DFGLA
Sbjct: 118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLA-------------- 162
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
+ + R +VL G T Y APE+ L + +S VDVWS+GCI
Sbjct: 163 -----TKVEYDGERKKVLCG----------TPNYIAPEV-LSKKGHSFEVDVWSIGCIMY 206
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ +P F + +I + NE + P ++
Sbjct: 207 TLLVGKPPFETSCLKETYLRIKK-----NEYSIP------------------------KH 237
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
+ P L+ KML DP+ R T L E+F
Sbjct: 238 INPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 66/292 (22%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNL 285
D I KI V G K FP S +L ++RNL
Sbjct: 239 FADQPIQIYEKI--VSG----------------KVRFPSHFSSDLKDLLRNL 272
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 89
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F +P + + QI+
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFX-EPH-ARFYAAQIVL 147
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 195
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 196 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 233
Query: 234 PGDSEI 239
D I
Sbjct: 234 FADQPI 239
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 130/325 (40%), Gaps = 74/325 (22%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRL 66
+++G G + VV + + T + A K ++ + + + + EI++L+ + ++ L
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 67 QDVVHSEKKLYLVFEY--------LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
+V + ++ L+ EY L L M S D RLIK QIL G+ Y
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI---RLIK----QILEGVYYL 147
Query: 119 HSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H + ++H DLKPQN+L+ +K+ DFG++R G
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC------------------- 188
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
R + G T Y APEI L +T D+W++G I ++ F G+
Sbjct: 189 -ELREIMG----------TPEYLAPEI-LNYDPITTATDMWNIGIIAYMLLTHTSPFVGE 236
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKM 296
+ I +V +E+T+ V+ L D + +
Sbjct: 237 DNQETYLNISQVNVDYSEETFSSVSQL-------------------------ATDFIQSL 271
Query: 297 LCMDPSRRITARSALEHEYFRDVEF 321
L +P +R TA L H + + +F
Sbjct: 272 LVKNPEKRPTAEICLSHSWLQQWDF 296
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 5 EKVEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+K+ +GEG +G V Y N T E +A+K ++ + + S +EI +L+ + H
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR-SGWKQEIDILRTLYH 75
Query: 61 GNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
+I++ + EK L LV EY+ L + D P + + F QI G+AY
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR--DYLPRHSIGLAQLLLFAQQICEGMAYL 133
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H+ +HR+L +N+L+D +K+ DFGLA+A +P HE++ R
Sbjct: 134 HAQHYIHRNLAARNVLLD-NDRLVKIGDFGLAKA--VPE---GHEYY------------R 175
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
R S + WY APE L + Y DVWS G E++
Sbjct: 176 VREDGDSPV--------FWY-APECLKEYKFYYAS-DVWSFGVTLYELLTH 216
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI+L S+ Y+ VD W++G + +M P F
Sbjct: 201 ---------------------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 207
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 208 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 93
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 154 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 199
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 200 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 244
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 245 FTLGGSP-YPG-IPVEELFKLLK 265
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 207
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 208 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 90
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 151 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 196
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 197 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 241
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 242 FTLGGSP-YPG-IPVEELFKLLK 262
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 121/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 101
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 160 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 199
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 200 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 250
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ DF +AF P DL+ K+L +D ++R+
Sbjct: 251 KLEY--------------DFPAAF---------------FPKARDLVEKLLVLDATKRL 280
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 147
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 253
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 254 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 298
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 299 FTLGGSP-YPG-IPVEELFKLLK 319
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 88
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 149 CTYQLARGMEYLASQKCIHRDLTARNVLV-TENNVMKIADFGLARDI------------- 194
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 195 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 239
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 240 FTLGGSP-YPG-IPVEELFKLLK 260
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 78/333 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL-------EQEDEGVPSTAIREISL 54
+ YE E +G G VV + + T + A+K I + +E + + ++E+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 55 LKEMQ-HGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+++ H NI++L+D + +LVF DL K + L + +I+R
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 114 G----IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTG 169
I H ++HRDLKP+N+L+D N +KL DFG + P
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD-PGE----------- 178
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRH-----YSTPVDVWSVGCIFA 224
+ R + G T Y APEI+ S + Y VD+WS G I
Sbjct: 179 --------KLRSVCG----------TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ P F ++ + R++ + N ++ P+W + V+
Sbjct: 221 TLLAGSPPFWHRKQM----LMLRMIMSGN------------YQFGSPEW--DDYSDTVK- 261
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
DL+S+ L + P +R TA AL H +F+
Sbjct: 262 ------DLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 48/227 (21%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
E+IG G +G V+ R N +A+K R E + + ++E +LK+ H NIVRL
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 68 DVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRL-IKTFLYQI---LRGIAYC 118
V ++ +Y+V E + DF RL +KT L + G+ Y
Sbjct: 179 GVCTQKQPIYIVMELVQGG---------DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
S +HRDL +N L+ + N LK++DFG++R V
Sbjct: 230 ESKCCIHRDLAARNCLVTEK-NVLKISDFGMSREEADGV--------------------- 267
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE 225
Y G L+ V + + APE L R YS+ DVWS G + E
Sbjct: 268 YAASGG------LRQVPVKWTAPEALNYGR-YSSESDVWSFGILLWE 307
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 78/333 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL-------EQEDEGVPSTAIREISL 54
+ YE E +G G VV + + T + A+K I + +E + + ++E+ +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 55 LKEMQ-HGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+++ H NI++L+D + +LVF DL K + L + +I+R
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKETRKIMR 118
Query: 114 G----IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTG 169
I H ++HRDLKP+N+L+D N +KL DFG + P
Sbjct: 119 ALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD-PGE----------- 165
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRH-----YSTPVDVWSVGCIFA 224
+ R + G T Y APEI+ S + Y VD+WS G I
Sbjct: 166 --------KLREVCG----------TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 207
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ P F ++ + R++ + N ++ P+W + V+
Sbjct: 208 TLLAGSPPFWHRKQM----LMLRMIMSGN------------YQFGSPEW--DDYSDTVK- 248
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
DL+S+ L + P +R TA AL H +F+
Sbjct: 249 ------DLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 73/272 (26%)
Query: 51 EISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLI 104
EIS+ + + H ++V +++V E L+L ++ + P+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE-------A 123
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ +L QI+ G Y H +RV+HRDLK NL ++ +K+ DFGLA
Sbjct: 124 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLA-------------- 168
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
+ + R + L G T Y APE+L + +S VDVWS+GCI
Sbjct: 169 -----TKVEYDGERKKTLCG----------TPNYIAPEVL-SKKGHSFEVDVWSIGCIMY 212
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ +P F + +I + NE + P ++
Sbjct: 213 TLLVGKPPFETSCLKETYLRIKK-----NEYSIP------------------------KH 243
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
+ P L+ KML DP+ R T L E+F
Sbjct: 244 INPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 207
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 208 -NNIDYYKN-----TTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NL+ID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLIIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y APEI++ S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVF---------EYLDLDLKKHMDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EYL M+ D P TF
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 207
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 208 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 78/333 (23%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL-------EQEDEGVPSTAIREISL 54
+ YE E +G G VV + + T + A+K I + +E + + ++E+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 55 LKEMQ-HGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+++ H NI++L+D + +LVF DL K + L + +I+R
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 114 G----IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTG 169
I H ++HRDLKP+N+L+D N +KL DFG + P
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD-PGE----------- 178
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRH-----YSTPVDVWSVGCIFA 224
+ R + G T Y APEI+ S + Y VD+WS G I
Sbjct: 179 --------KLREVCG----------TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ P F ++ + R++ + N ++ P+W + V+
Sbjct: 221 TLLAGSPPFWHRKQM----LMLRMIMSGN------------YQFGSPEW--DDYSDTVK- 261
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYFR 317
DL+S+ L + P +R TA AL H +F+
Sbjct: 262 ------DLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 73/272 (26%)
Query: 51 EISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLI 104
EIS+ + + H ++V +++V E L+L ++ + P+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE-------A 119
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ +L QI+ G Y H +RV+HRDLK NL ++ +K+ DFGLA
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLA-------------- 164
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
+ + R + L G T Y APE+L + +S VDVWS+GCI
Sbjct: 165 -----TKVEYDGERKKTLCG----------TPNYIAPEVL-SKKGHSFEVDVWSIGCIMY 208
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ +P F + +I + NE + P ++
Sbjct: 209 TLLVGKPPFETSCLKETYLRIKK-----NEYSIP------------------------KH 239
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
+ P L+ KML DP+ R T L E+F
Sbjct: 240 INPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 73/272 (26%)
Query: 51 EISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY------LDLDLKKHMDSCPDFANDPRLI 104
EIS+ + + H ++V +++V E L+L ++ + P+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE-------A 119
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ +L QI+ G Y H +RV+HRDLK NL ++ +K+ DFGLA
Sbjct: 120 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE-VKIGDFGLA-------------- 164
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
+ + R + L G T Y APE+L + +S VDVWS+GCI
Sbjct: 165 -----TKVEYDGERKKTLCG----------TPNYIAPEVL-SKKGHSFEVDVWSIGCIMY 208
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
++ +P F + +I + NE + P ++
Sbjct: 209 TLLVGKPPFETSCLKETYLRIKK-----NEYSIP------------------------KH 239
Query: 285 LEPAGIDLLSKMLCMDPSRRITARSALEHEYF 316
+ P L+ KML DP+ R T L E+F
Sbjct: 240 INPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +++ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMRIADFGLARDI------------- 207
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 208 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVF---------EYLDLDLKKHMDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EYL M+ D P TF
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDI------------- 207
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I Y + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 208 -NNIDYY-----KKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 48/227 (21%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
E+IG G +G V+ R N +A+K R E + + ++E +LK+ H NIVRL
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 68 DVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRL-IKTFLYQI---LRGIAYC 118
V ++ +Y+V E + DF RL +KT L + G+ Y
Sbjct: 179 GVCTQKQPIYIVMELVQGG---------DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
S +HRDL +N L+ + N LK++DFG++R V S G
Sbjct: 230 ESKCCIHRDLAARNCLVTEK-NVLKISDFGMSREEADGVXA------ASGG--------- 273
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE 225
L+ V + + APE L R YS+ DVWS G + E
Sbjct: 274 ------------LRQVPVKWTAPEALNYGR-YSSESDVWSFGILLWE 307
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 57/243 (23%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
++++E IG G +G V+KA++ + +T +K+++ E A RE+ L ++ H NI
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE------KAEREVKALAKLDHVNI 66
Query: 64 VRL---------------QDVVHSEKK-LYLVFEYLDLD-LKKHMDSCPDFANDPRLIKT 106
V ++ S+ K L++ E+ D L++ ++ D L
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 107 FLYQILRGIAYCHSHRVLHRDLKPQNL-LIDRRTNALKLADFGLARAFGIPVRTFTHEHW 165
QI +G+ Y HS ++++RDLKP N+ L+D T +K+ DFGL
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVD--TKQVKIGDFGLV--------------- 169
Query: 166 GSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE 225
S+ R R TL Y +PE + S+ Y VD++++G I AE
Sbjct: 170 ----TSLKNDGKRXRSKG-----------TLRYMSPE-QISSQDYGKEVDLYALGLILAE 213
Query: 226 MVN 228
+++
Sbjct: 214 LLH 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 95
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + + A S
Sbjct: 154 DLKPENILLNEDMH-IQITDFGTAKVLSPESK---------------------QARANSF 191
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
V T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 192 ------VGTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 245 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 274
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLAR--------------- 205
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 206 ----DINNIDXXKKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 48/252 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T Y AP I+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEIDELFKI 245
D I KI
Sbjct: 239 FADQPIQIYEKI 250
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 99
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + + A S
Sbjct: 158 DLKPENILLNEDMH-IQITDFGTAKVLSPESK---------------------QARANSF 195
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
V T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 196 ------VGTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 249 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 278
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 59/247 (23%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH--- 60
+E VE +G GTYG VYK R+ T + A+K + + ++E +EI++LK+ H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRN 82
Query: 61 -----GNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-------LIKTFL 108
G ++ ++ + +L+LV E+ S D + + I
Sbjct: 83 IATYYGAFIK-KNPPGMDDQLWLVMEFCG------AGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 109 YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGST 168
+ILRG+++ H H+V+HRD+K QN+L+ +KL DFG++ V
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVLLTENAE-VKLVDFGVSAQLDRTVG---------- 184
Query: 169 GISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRH----YSTPVDVWSVGCIFA 224
R G T ++ APE++ + Y D+WS+G
Sbjct: 185 ---------RRNTFIG----------TPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 225
Query: 225 EMVNQRP 231
EM P
Sbjct: 226 EMAEGAP 232
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 98
Query: 68 DVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y L K++ F D + + +I+ + Y H ++HR
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + + A S
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESK---------------------QARANSF 194
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
V T Y +PE LL + S D+W++GCI ++V P F +E KI
Sbjct: 195 ------VGTAQYVSPE-LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 248 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 277
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 75/326 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+ ++ ++ +G+GT+G V R T A+K +R E +DE + + E +L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQN 61
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F + + + +I+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER--ARFYGAEIVSALE 119
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HS V++RD+K +NL++D+ + +K+ DFGL + GIS
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKE----------------GIS----- 157
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPG 235
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 158 ------DGATMKTFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
D E LF++ + E +P R L P LL+
Sbjct: 209 DHE--RLFELILM----EEIRFP------------------------RTLSPEAKSLLAG 238
Query: 296 MLCMDPSRRI-----TARSALEHEYF 316
+L DP +R+ A+ +EH +F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 96
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 155 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANAFVG-- 194
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 195 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 246 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 275
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 57/263 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE-------TIALKKIRLEQEDEGVPSTAIREISLLKEM-QHG 61
+GEG +G V A ++ T+A+K ++ + ++ + S + E+ ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDL-DLKKH--------MDSCPDFANDPRLIKTF----- 107
NI+ L + LY++ EY +L+++ M+ D P TF
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 108 -LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWG 166
YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLAR--------------- 205
Query: 167 STGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
I + G L ++++ APE L R Y+ DVWS G + E+
Sbjct: 206 ----DINNIDXXKKTTNGRLPVKWM--------APEALF-DRVYTHQSDVWSFGVLMWEI 252
Query: 227 --VNQRPLFPGDSEIDELFKIFR 247
+ P +PG ++ELFK+ +
Sbjct: 253 FTLGGSP-YPG-IPVEELFKLLK 273
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 75/326 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+ ++ ++ +G+GT+G V R T A+K +R E +DE + + E +L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQN 61
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F + + + +I+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER--ARFYGAEIVSALE 119
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HS V++RD+K +NL++D+ + +K+ DFGL + GIS
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKE----------------GIS----- 157
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPG 235
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 158 ------DGATMKXFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
D E LF++ + E +P R L P LL+
Sbjct: 209 DHE--RLFELILM----EEIRFP------------------------RTLSPEAKSLLAG 238
Query: 296 MLCMDPSRRI-----TARSALEHEYF 316
+L DP +R+ A+ +EH +F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 75/326 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+ ++ ++ +G+GT+G V R T A+K +R E +DE + + E +L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQN 61
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F + + + +I+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER--ARFYGAEIVSALE 119
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HS V++RD+K +NL++D+ + +K+ DFGL + GIS
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKE----------------GIS----- 157
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPG 235
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 158 ------DGATMKTFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
D E LF++ + E +P R L P LL+
Sbjct: 209 DHE--RLFELILM----EEIRFP------------------------RTLSPEAKSLLAG 238
Query: 296 MLCMDPSRRI-----TARSALEHEYF 316
+L DP +R+ A+ +EH +F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 92
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS--------CPDFANDP------RLI 104
H NI+ L + LY++ EY +L++++ + C + +++P + +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 198
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 199 ------DIHHIDYYKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 243
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 244 EIFTLGGSP-YPG-VPVEELFKLLK 266
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 75/326 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+ ++ ++ +G+GT+G V R T A+K +R E +DE + + E +L+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQN 64
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F + + + +I+ +
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER--ARFYGAEIVSALE 122
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HS V++RD+K +NL++D+ + +K+ DFGL + GIS
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKE----------------GIS----- 160
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPG 235
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 161 ------DGATMKTFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 211
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
D E LF++ + E +P R L P LL+
Sbjct: 212 DHE--RLFELILM----EEIRFP------------------------RTLSPEAKSLLAG 241
Query: 296 MLCMDPSRRI-----TARSALEHEYF 316
+L DP +R+ A+ +EH +F
Sbjct: 242 LLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 75/326 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+ ++ ++ +G+GT+G V R T A+K +R E +DE + + E +L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQN 61
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F + + + +I+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER--ARFYGAEIVSALE 119
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HS V++RD+K +NL++D+ + +K+ DFGL + GIS
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKE----------------GIS----- 157
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPG 235
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 158 ------DGATMKXFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
D E LF++ + E +P R L P LL+
Sbjct: 209 DHE--RLFELILM----EEIRFP------------------------RTLSPEAKSLLAG 238
Query: 296 MLCMDPSRRI-----TARSALEHEYF 316
+L DP +R+ A+ +EH +F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 95
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 154 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 193
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 194 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 245 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 274
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 77
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS--------CPDFANDP------RLI 104
H NI+ L + LY++ EY +L++++ + C + +++P + +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 183
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 184 ------DIHHIDYYKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 228
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 229 EIFTLGGSP-YPG-VPVEELFKLLK 251
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 80
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 139 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 178
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 179 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 229
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 230 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 259
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 43/249 (17%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVP----STAIREISLLKEM 58
+Y +G+G +G V+ +A+K I + P T E++LL ++
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 59 Q----HGNIVRLQDVVHSEKKLYLVFE--YLDLDLKKHMDSCPDFANDPRLIKTFLYQIL 112
H ++RL D +++ LV E DL ++ P + F Q++
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS--RCFFGQVV 149
Query: 113 RGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
I +CHS V+HRD+K +N+LID R KL DFG H+
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG--------ALLHD-------EP 194
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y F RV Y PE + ++++ P VWS+G + +MV
Sbjct: 195 YTDFDGTRV----------------YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
Query: 233 FPGDSEIDE 241
F D EI E
Sbjct: 239 FERDQEILE 247
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 43/240 (17%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-------EDEGVPSTAIREISLL 55
+Y + +G G +G V+ A + N+ + +K I+ E+ ED + + EI++L
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL-EIAIL 83
Query: 56 KEMQHGNIVRLQDVVHSEKKLYLVFEY--LDLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
++H NI+++ D+ ++ LV E LDL +D P D L Q++
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRL--DEPLASYIFRQLVS 141
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ Y ++HRD+K +N++I +KL DFG A
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFT-IKLIDFGSA----------------------- 177
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
++L G L F T+ Y APE+L+G+ + +++WS+G +V + F
Sbjct: 178 -AYLE----RGKLFYTFCG--TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 98
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 196
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 197 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 248 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 277
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 98
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 196
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
T Y +PE LL + D+W++GCI ++V P F +E
Sbjct: 197 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 98
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 196
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
T Y +PE LL + D+W++GCI ++V P F +E
Sbjct: 197 --------TAQYVSPE-LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 75/326 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+ ++ ++ +G+GT+G V R T A+K +R E +DE + + E +L+
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQN 66
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F + + + +I+ +
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER--ARFYGAEIVSALE 124
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HS V++RD+K +NL++D+ + +K+ DFGL + GIS
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKE----------------GIS----- 162
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPG 235
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 163 ------DGATMKXFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
D E LF++ + E +P R L P LL+
Sbjct: 214 DHE--RLFELILM----EEIRFP------------------------RTLSPEAKSLLAG 243
Query: 296 MLCMDPSRRI-----TARSALEHEYF 316
+L DP +R+ A+ +EH +F
Sbjct: 244 LLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 98
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 196
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 197 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 248 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 96
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 155 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 194
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 195 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 246 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 275
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 48/246 (19%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALK------KIRLEQEDEGVPSTAIREISL 54
+DQ+++++ +G G++G V ++ + A+K ++L+Q + + E +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TLNEKRI 94
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILR 113
L+ + +V+L+ LY+V EY+ ++ H+ F+ +P + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPH-ARFYAAQIVL 152
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
Y HS +++RDLKP+NLLID++ +++ DFG A+ + RT W G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-GYIQVTDFGFAKR--VKGRT-----WXLCG---- 200
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
T APEI+L S+ Y+ VD W++G + EM P F
Sbjct: 201 ---------------------TPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 234 PGDSEI 239
D I
Sbjct: 239 FADQPI 244
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 96
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 155 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 194
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 195 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 246 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 275
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
EKIG G++G V++A ++ + KI +EQ+ E V + +RE++++K ++H NIV
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAV---KILMEQDFHAERV-NEFLREVAIMKRLRHPNIVL 98
Query: 66 LQDVVHSEKKLYLVFEYL---DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
V L +V EYL L H + ++ R + + Y + +G+ Y H+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL-SMAYDVAKGMNYLHNRN 157
Query: 123 --VLHRDLKPQNLLIDRRTNALKLADFGLAR 151
++HRDLK NLL+D++ +K+ DFGL+R
Sbjct: 158 PPIVHRDLKSPNLLVDKKY-TVKVCDFGLSR 187
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 99
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 158 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 197
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 198 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 249 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 278
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 98
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 196
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 197 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 248 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 277
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 75/326 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+ ++ ++ +G+GT+G V R T A+K +R E +DE + + E +L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQN 61
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F + + + +I+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER--ARFYGAEIVSALE 119
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y HS V++RD+K +NL++D+ + +K+ DFGL + GIS
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKE----------------GIS----- 157
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFPG 235
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 158 ------DGATMKXFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 236 DSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSK 295
D E LF++ + E +P R L P LL+
Sbjct: 209 DHE--RLFELILM----EEIRFP------------------------RTLSPEAKSLLAG 238
Query: 296 MLCMDPSRRI-----TARSALEHEYF 316
+L DP +R+ A+ +EH +F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 74
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 133 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 172
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 173 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 224 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 253
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 73
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 132 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 171
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 172 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 222
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 223 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 252
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 103
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 162 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 201
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
T Y +PE LL + D+W++GCI ++V P F +E
Sbjct: 202 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 75
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 134 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 173
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
T Y +PE LL + D+W++GCI ++V P F +E
Sbjct: 174 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 78/310 (25%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+ E E +G G +GVV KA+ + +A+K+I E E + I E+ L + H N
Sbjct: 10 EIEVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAF----IVELRQLSRVNHPN 63
Query: 63 IVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
IV+L + + LV EY + ++ + P + + ++ Q +G+AY
Sbjct: 64 IVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM--SWCLQCSQGVAYL 119
Query: 119 HSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
HS + ++HRDLKP NLL+ LK+ DFG A ++T + GS
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAA------ 169
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
+ APE+ GS +YS DV+S G I E++ +R F
Sbjct: 170 ----------------------WMAPEVFEGS-NYSEKCDVFSWGIILWEVITRRKPF-- 204
Query: 236 DSEIDEL-FKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
DE+ FR++ + T P +++NL L++
Sbjct: 205 ----DEIGGPAFRIMWAVHNGTRP---------------------PLIKNLPKPIESLMT 239
Query: 295 KMLCMDPSRR 304
+ DPS+R
Sbjct: 240 RCWSKDPSQR 249
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 73
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 74 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 184
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 185 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 222
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 223 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 266
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 267 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 293
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 68
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 179
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 180 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 217
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 218 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 261
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 262 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ V AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 76
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 135 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 174
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
T Y +PE LL + D+W++GCI ++V P F +E
Sbjct: 175 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 99/229 (43%), Gaps = 40/229 (17%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIR--LEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
K GEG +GVVYK V N T+A+KK+ ++ E + +EI + + QH N+V L
Sbjct: 29 KXGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 67 QDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L LV+ Y LD +D P + R GI + H +
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRC--KIAQGAANGINFLHENH 144
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRD+K N+L+D A K++DFGLARA S F+ + +
Sbjct: 145 HIHRDIKSANILLDEAFTA-KISDFGLARA------------------SEKFA----QXV 181
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
S I V T Y APE L G + D++S G + E++ P
Sbjct: 182 XXSRI-----VGTTAYXAPEALRG--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 74
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 75 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 185
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 186 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 223
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 224 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 267
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 268 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 294
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 72
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 73 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 183
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 184 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 221
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 222 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 265
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 266 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 292
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 67
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 68 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 178
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 179 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 216
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 217 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 260
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 261 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 37/231 (16%)
Query: 5 EKVEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+K+ +GEG +G V Y N T E +A+K ++ + + S +EI +L+ + H
Sbjct: 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR-SGWKQEIDILRTLYH 92
Query: 61 GNIVRLQDVVH--SEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
+I++ + L LV EY+ L + D P + + F QI G+AY
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLR--DYLPRHSIGLAQLLLFAQQICEGMAYL 150
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
H+ +HRDL +N+L+D +K+ DFGLA+A +P HE + R
Sbjct: 151 HAQHYIHRDLAARNVLLD-NDRLVKIGDFGLAKA--VPE---GHEXY------------R 192
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
R S + WY APE L + Y DVWS G E++
Sbjct: 193 VREDGDSPV--------FWY-APECLKEYKFYYAS-DVWSFGVTLYELLTH 233
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 82
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 83 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 193
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 194 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 231
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 232 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 275
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 276 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 302
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 78/310 (25%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+ E E +G G +GVV KA+ + +A+K+I E E + I E+ L + H N
Sbjct: 9 EIEVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAF----IVELRQLSRVNHPN 62
Query: 63 IVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
IV+L + + LV EY + ++ + P + + ++ Q +G+AY
Sbjct: 63 IVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM--SWCLQCSQGVAYL 118
Query: 119 HSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
HS + ++HRDLKP NLL+ LK+ DFG A ++T + GS
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAA------ 168
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
+ APE+ GS +YS DV+S G I E++ +R F
Sbjct: 169 ----------------------WMAPEVFEGS-NYSEKCDVFSWGIILWEVITRRKPF-- 203
Query: 236 DSEIDEL-FKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
DE+ FR++ + T P +++NL L++
Sbjct: 204 ----DEIGGPAFRIMWAVHNGTRP---------------------PLIKNLPKPIESLMT 238
Query: 295 KMLCMDPSRR 304
+ DPS+R
Sbjct: 239 RCWSKDPSQR 248
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 68
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 179
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 180 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 217
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 218 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 261
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 262 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 112
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 223
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 224 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 261
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 262 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 305
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 306 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 332
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 118
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 119 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 229
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 230 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 267
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 268 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 311
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 312 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 338
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
VE++G G +G V+ + +A+K ++ + P + E +L+K++QH +VRL
Sbjct: 18 VERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYCH 119
VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 74 YAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 127 ERNYIHRDLRAANILVS-DTLSCKIADFGLAR 157
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 137/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 66
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 177
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 178 CY---------------------TPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 215
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 216 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 259
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 260 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G +G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 81 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 134 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 165
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G +G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 73 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 126 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 157
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G +G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 79 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 132 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 163
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 146/357 (40%), Gaps = 76/357 (21%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLK------ 56
+Y V K+G G + V+ A++ V N +A+K +R D+ A EI LL+
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDAD 76
Query: 57 -----EMQHGNIVRLQDVVHSEK----KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTF 107
M +I++L D + + + +VFE L +L + +K
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 108 LYQILRGIAYCHSH-RVLHRDLKPQNLL---IDRRTN--ALKLADFGLARAFGIPVRTFT 161
Q+L G+ Y H ++H D+KP+N+L +D N +K+AD G A +
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--------CWY 188
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
EH+ ++ + T YR+PE+LLG+ + D+WS C
Sbjct: 189 DEHYTNS------------------------IQTREYRSPEVLLGAP-WGCGADIWSTAC 223
Query: 222 IFAEMVNQRPLFPGDS------EIDELFKIFRVLGT-PNEDTWPGVTSLPDFK------- 267
+ E++ LF D + D + +I +LG P+ G + F
Sbjct: 224 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRN 283
Query: 268 -SAFPKWPSKELGT----VVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
S WP +++ T ++ D LS ML +DP +R A + H + +D
Sbjct: 284 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
VE++G G +G V+ + +A+K ++ + P + E +L+K++QH +VRL
Sbjct: 18 VERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYCH 119
VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 74 YAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 127 ERNYIHRDLRAANILVS-DTLSCKIADFGLAR 157
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 146/357 (40%), Gaps = 76/357 (21%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLK------ 56
+Y V K+G G + V+ A++ V N +A+K +R D+ A EI LL+
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDAD 76
Query: 57 -----EMQHGNIVRLQDVVHSEK----KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTF 107
M +I++L D + + + +VFE L +L + +K
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 108 LYQILRGIAYCHSH-RVLHRDLKPQNLL---IDRRTN--ALKLADFGLARAFGIPVRTFT 161
Q+L G+ Y H ++H D+KP+N+L +D N +K+AD G A +
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--------CWY 188
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
EH+ ++ + T YR+PE+LLG+ + D+WS C
Sbjct: 189 DEHYTNS------------------------IQTREYRSPEVLLGAP-WGCGADIWSTAC 223
Query: 222 IFAEMVNQRPLFPGDS------EIDELFKIFRVLGT-PNEDTWPGVTSLPDFK------- 267
+ E++ LF D + D + +I +LG P+ G + F
Sbjct: 224 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRN 283
Query: 268 -SAFPKWPSKELGT----VVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
S WP +++ T ++ D LS ML +DP +R A + H + +D
Sbjct: 284 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G +G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 82 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 135 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 166
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G +G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 79 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 132 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 163
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G +G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 74 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 126
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 127 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 158
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G +G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 83 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 136 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 167
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
VE++G G +G V+ + +A+K ++ + P + E +L+K++QH +VRL
Sbjct: 20 VERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRL 75
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYCH 119
VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 76 YAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 129 ERNYIHRDLRAANILVS-DTLSCKIADFGLAR 159
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G +G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 78 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 131 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 162
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIR----LEQEDEGVPSTAIREISLLK 56
+D +E + +G+G++G V AR T + A+K ++ L+ +D T R +SL +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
H + +L + +L+ V E+++ DL H+ F D + + +I+ +
Sbjct: 82 --NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRF--DEARARFYAAEIISAL 137
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
+ H +++RDLK N+L+D + KLADFG+ + GI T G+
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHC-KLADFGMCKE-GICNGVTTATFCGTPD------ 189
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPG 235
Y APEI L Y VD W++G + EM+ F
Sbjct: 190 ----------------------YIAPEI-LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
Query: 236 DSEIDELFKIFRVLGTPNED----TWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPA 288
++E D+LF+ N++ TW + KS K P+ LG++ + E A
Sbjct: 227 ENE-DDLFE-----AILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHA 277
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 54/262 (20%)
Query: 7 VEKIGEGTYGVVYKARNCVTNET-IALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNI 63
V+++G G +G V+ N T +A+K ++ G S + E +L+K +QH +
Sbjct: 18 VKRLGAGQFGEVWMGY--YNNSTKVAVKTLK-----PGTMSVQAFLEEANLMKTLQHDKL 70
Query: 64 VRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
VRL VV E+ +Y++ EY+ LD K + P+LI F QI G+AY
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLID-FSAQIAEGMAYIE 127
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+HRDL+ N+L+ + K+ADFGLAR +E+ G
Sbjct: 128 RKNYIHRDLRAANVLVS-ESLMCKIADFGLARVIE------DNEYTAREGA--------- 171
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL-FPGDSE 238
K W I G ++ DVWS G + E+V + +PG +
Sbjct: 172 ------------KFPIKWTAPEAINFGC--FTIKSDVWSFGILLYEIVTYGKIPYPGRTN 217
Query: 239 IDEL------FKIFRVLGTPNE 254
D + +++ RV P+E
Sbjct: 218 ADVMTALSQGYRMPRVENCPDE 239
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
VE++G G +G V+ + +A+K ++ + P + E +L+K++QH +VRL
Sbjct: 13 VERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRL 68
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYCH 119
VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 69 YAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 122 ERNYIHRDLRAANILVS-DTLSCKIADFGLAR 152
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 92
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS----CPDFANDP----------RLI 104
H NI+ L + LY++ EY +L++++ + +F+ +P + +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 198
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 199 ------DIHHIDXXKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 243
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 244 EIFTLGGSP-YPG-VPVEELFKLLK 266
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 64/299 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+GEG++ AR T+ A+K + ++ VP RE ++ + H V+L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVT-RERDVMSRLDHPFFVKLY 96
Query: 68 DVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++KLY Y + +L K++ F D + + +I+ + Y H ++HR
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLKP+N+L++ + +++ DFG A+ + R G
Sbjct: 155 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQ-----------------ARANXFVG-- 194
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y +PE LL + D+W++GCI ++V P F +E KI
Sbjct: 195 --------TAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRI 305
++ E +P + FPK DL+ K+L +D ++R+
Sbjct: 246 KL-----EYDFP--------EKFFPK----------------ARDLVEKLLVLDATKRL 275
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 135/337 (40%), Gaps = 78/337 (23%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 66
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTEP--- 177
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
T +Y APE+ LG Y D+WS+G I ++ P
Sbjct: 178 ---------------------CYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYP 215
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTS---LPDFKSAFPKWP--SKELGTVVRNLE 286
F + + PG+ + + ++ P+W S+E+ ++RNL
Sbjct: 216 PFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL- 259
Query: 287 PAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R+T + H + VP
Sbjct: 260 ----------LKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 134/323 (41%), Gaps = 41/323 (12%)
Query: 2 DQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ- 59
D Y+ E + GEG + V N +T++ A+K I E++ + S RE+ +L + Q
Sbjct: 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFREVEMLYQCQG 69
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H N++ L + E + YLVFE + + H+ F + + + + +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHF--NELEASVVVQDVASALDFL 127
Query: 119 HSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+ + HRDLKP+N+L + + + +K+ DFGL + G S
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKL------------NGDCSPIST 175
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
GS +VV + I Y D+WS+G I +++ P F G
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASI------YDKRCDLWSLGVILYILLSGYPPFVGR 229
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL--PDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
D G + P ++ + ++P K+ ++ A DL+S
Sbjct: 230 CGSD--------CGWDRGEACPACQNMLFESIQEGKYEFPDKDWA----HISCAAKDLIS 277
Query: 295 KMLCMDPSRRITARSALEHEYFR 317
K+L D +R++A L+H + +
Sbjct: 278 KLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
EKIG G++G V++A ++ + KI +EQ+ E V + +RE++++K ++H NIV
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAV---KILMEQDFHAERV-NEFLREVAIMKRLRHPNIVL 98
Query: 66 LQDVVHSEKKLYLVFEYL---DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
V L +V EYL L H + ++ R + + Y + +G+ Y H+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL-SMAYDVAKGMNYLHNRN 157
Query: 123 --VLHRDLKPQNLLIDRRTNALKLADFGLAR 151
++HR+LK NLL+D++ +K+ DFGL+R
Sbjct: 158 PPIVHRNLKSPNLLVDKKY-TVKVCDFGLSR 187
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 70/256 (27%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
++++E IG G +G V+KA++ + +T +++++ E A RE+ L ++ H NI
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE------KAEREVKALAKLDHVNI 67
Query: 64 VRLQ--------------DVVHSE---------------KKLYLVFEYLDLD-LKKHMDS 93
V D + S K L++ E+ D L++ ++
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 94 CPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNL-LIDRRTNALKLADFGLARA 152
D L QI +G+ Y HS +++HRDLKP N+ L+D T +K+ DFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD--TKQVKIGDFGLV-- 183
Query: 153 FGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYST 212
S+ R R TL Y +PE + S+ Y
Sbjct: 184 -----------------TSLKNDGKRTRSKG-----------TLRYMSPE-QISSQDYGK 214
Query: 213 PVDVWSVGCIFAEMVN 228
VD++++G I AE+++
Sbjct: 215 EVDLYALGLILAELLH 230
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 133
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS--------------CPDFANDPRLI 104
H NI+ L + LY++ EY +L++++ + P+ + +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 239
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 240 ------DIHHIDYYKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 284
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 285 EIFTLGGSP-YPG-VPVEELFKLLK 307
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 92
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS--------------CPDFANDPRLI 104
H NI+ L + LY++ EY +L++++ + P+ + +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 198
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 199 ------DIHHIDYYKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 243
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 244 EIFTLGGSP-YPG-VPVEELFKLLK 266
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 92
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS--------------CPDFANDPRLI 104
H NI+ L + LY++ EY +L++++ + P+ + +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 198
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 199 ------DIHHIDYYKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 243
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 244 EIFTLGGSP-YPG-VPVEELFKLLK 266
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 84
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS--------------CPDFANDPRLI 104
H NI+ L + LY++ EY +L++++ + P+ + +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 190
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 191 ------DIHHIDYYKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 235
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 236 EIFTLGGSP-YPG-VPVEELFKLLK 258
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 81
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS--------------CPDFANDPRLI 104
H NI+ L + LY++ EY +L++++ + P+ + +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 187
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 188 ------DIHHIDYYKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 232
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 233 EIFTLGGSP-YPG-VPVEELFKLLK 255
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 61/265 (23%)
Query: 10 IGEGTYGVVYKAR---------NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-Q 59
+GEG +G V A N VT +A+K ++ + ++ + S I E+ ++K + +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDL-SDLISEMEMMKMIGK 85
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS--------------CPDFANDPRLI 104
H NI+ L + LY++ EY +L++++ + P+ + +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ YQ+ RG+ Y S + +HRDL +N+L+ N +K+ADFGLAR
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLV-TEDNVMKIADFGLAR------------- 191
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
I+ + G L ++++ APE L R Y+ DVWS G +
Sbjct: 192 ------DIHHIDYYKKTTNGRLPVKWM--------APEALF-DRIYTHQSDVWSFGVLLW 236
Query: 225 EM--VNQRPLFPGDSEIDELFKIFR 247
E+ + P +PG ++ELFK+ +
Sbjct: 237 EIFTLGGSP-YPG-VPVEELFKLLK 259
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 21/153 (13%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
VE++G G G V+ N T +A+K ++ + P + E +L+K++QH +VR
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 66 LQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYC 118
L VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 73 LYAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HRDL+ N+L+ T + K+ADFGLAR
Sbjct: 126 EERNYIHRDLRAANILVS-DTLSCKIADFGLAR 157
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 133/320 (41%), Gaps = 70/320 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+G+G++G V + T+E A+K ++ + +D+ V T + + L + + +L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 68 DVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
+ +LY V EY++ DL H+ F +P + + +I G+ + S +++R
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF-KEPHAV-FYAAEIAIGLFFLQSKGIIYR 145
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+++D + +K+ADFG+ + W +
Sbjct: 146 DLKLDNVMLDSEGH-IKIADFGMCK----------ENIWDGVTTKXFCG----------- 183
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIF 246
T Y APEI+ + Y VD W+ G + EM+ + F G+ E DELF+
Sbjct: 184 --------TPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ-- 231
Query: 247 RVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRIT 306
S+ + A+PK SKE + + L + P +R+
Sbjct: 232 ---------------SIMEHNVAYPKSMSKEAVAICKGL-----------MTKHPGKRLG 265
Query: 307 A-----RSALEHEYFRDVEF 321
R EH +FR +++
Sbjct: 266 CGPEGERDIKEHAFFRYIDW 285
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
VE++G G +G V+ + +A+K ++ + P + E +L+K++QH +VRL
Sbjct: 14 VERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRL 69
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL-------YQILRGIAYCH 119
VV +++ +Y++ EY++ S DF P IK + QI G+A+
Sbjct: 70 YAVV-TQEPIYIITEYME------NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+HR+L+ N+L+ T + K+ADFGLAR
Sbjct: 123 ERNYIHRNLRAANILVS-DTLSCKIADFGLAR 153
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 142 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 177
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 178 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 24/155 (15%)
Query: 7 VEKIGEGTYGVVYKARNCVTNET-IALKKIRLEQEDEGVPSTA-----IREISLLKEMQH 60
V+K+G G +G V+ N T +A+K ++ P T + E +L+K +QH
Sbjct: 17 VKKLGAGQFGEVWMGY--YNNSTKVAVKTLK--------PGTMSVQAFLEEANLMKTLQH 66
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+VRL VV E+ +Y++ E++ LD K + P+LI F QI G+A
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLID-FSAQIAEGMA 123
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
Y +HRDL+ N+L+ K+ADFGLAR
Sbjct: 124 YIERKNYIHRDLRAANVLVSESL-MCKIADFGLAR 157
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 128 LKPQNLLIDRRTNALKLADFGLAR 151
L +N L+ + +K+ADFGL+R
Sbjct: 138 LAARNCLVG-ENHLVKVADFGLSR 160
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 5 EKVEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+++ +GEG +G V Y T E +A+K ++ E + +EI +L+ + H
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK-KEIEILRNLYH 82
Query: 61 GNIVRLQDVVHSE--KKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+ + + + + L+ E+L LK+++ + N + +K + QI +G+ Y
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDY 141
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
S + +HRDL +N+L++ + +K+ DFGL +A T + + +
Sbjct: 142 LGSRQYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPV------- 193
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
WY APE L+ S+ Y DVWS G E++
Sbjct: 194 ------------------FWY-APECLMQSKFY-IASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 5 EKVEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+++ +GEG +G V Y T E +A+K ++ E + +EI +L+ + H
Sbjct: 12 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK-KEIEILRNLYH 70
Query: 61 GNIVRLQDVVHSE--KKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
NIV+ + + + + L+ E+L LK+++ + N + +K + QI +G+ Y
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDY 129
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
S + +HRDL +N+L++ + +K+ DFGL +A T + + +
Sbjct: 130 LGSRQYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPV------- 181
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
WY APE L+ S+ Y DVWS G E++
Sbjct: 182 ------------------FWY-APECLMQSKFY-IASDVWSFGVTLHELL 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 150 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 185
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 186 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 220
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 142 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 177
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 178 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 137 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 172
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 173 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 137 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 172
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 173 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 55/257 (21%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
++++G G +G V+ N +A+K ++ P + + E ++K+++H +V+L
Sbjct: 14 IKRLGNGQFGEVWMG-TWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQL 69
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAND--------PRLIKTFLYQILRGIAYC 118
VV SE+ +Y+V EY++ S DF D P L+ Q+ G+AY
Sbjct: 70 YAVV-SEEPIYIVTEYMN------KGSLLDFLKDGEGRALKLPNLVD-MAAQVAAGMAYI 121
Query: 119 HSHRVLHRDLKPQNLLIDRRTNAL--KLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
+HRDL+ N+L+ N L K+ADFGLAR +E G
Sbjct: 122 ERMNYIHRDLRSANILVG---NGLICKIADFGLARLIE------DNEXTARQGAKFPIK- 171
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+V + R +PG
Sbjct: 172 ---------------------WTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPG 209
Query: 236 DSEIDELFKIFRVLGTP 252
+ + L ++ R P
Sbjct: 210 MNNREVLEQVERGYRMP 226
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HRD
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 128 LKPQNLLIDRRTNALKLADFGLAR 151
L +N L+ + +K+ADFGL+R
Sbjct: 135 LAARNCLVG-ENHLVKVADFGLSR 157
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 140
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 141 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 176
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 177 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 137 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 172
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 173 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 37/233 (15%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQH 60
D +E + IG+G++G V + T + A+K + ++ + +E+ +++ ++H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 61 GNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
+V L E+ +++V + L DL+ H+ F + +K F+ +++ + Y
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE--TVKLFICELVMALDYLQ 132
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+ R++HRD+KP N+L+D + + + DF +A +P T +
Sbjct: 133 NQRIIHRDMKPDNILLDEHGH-VHITDFNIAAM--LPRET------------------QI 171
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSR--HYSTPVDVWSVGCIFAEMVNQR 230
+AG T Y APE+ + YS VD WS+G E++ R
Sbjct: 172 TTMAG----------TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 142 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 177
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 178 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 138 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAPAGA-- 173
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 174 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 139 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 174
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 175 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 137 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 172
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 173 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 128 LKPQNLLIDRRTNALKLADFGLAR 151
L +N L+ + +K+ADFGL+R
Sbjct: 142 LAARNCLVG-ENHLVKVADFGLSR 164
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 139 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAPAGA-- 174
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 175 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 139 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 174
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 175 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y+V EY+ +L ++ C ++ QI + Y +HRD
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 128 LKPQNLLIDRRTNALKLADFGLAR 151
L +N L+ + +K+ADFGL+R
Sbjct: 156 LAARNCLVGEN-HVVKVADFGLSR 178
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 56/252 (22%)
Query: 2 DQYEKVEKIGEGTYGVVYKAR--NCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKE 57
+ E V IGEG +G V++AR + E + +++ +E+ A RE +L+ E
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDS------C----PDFANDPRLIK- 105
+ NIV+L V K + L+FEY+ DL + + S C D + R+
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 106 -----------TFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154
Q+ G+AY + +HRDL +N L+ +K+ADFGL+R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM-VVKIADFGLSR--- 222
Query: 155 IPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPV 214
++ +++ + G + + + PE + +R Y+T
Sbjct: 223 ---NIYSADYYKADGN---------------------DAIPIRWMPPESIFYNR-YTTES 257
Query: 215 DVWSVGCIFAEM 226
DVW+ G + E+
Sbjct: 258 DVWAYGVVLWEI 269
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 135/323 (41%), Gaps = 76/323 (23%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+G+G++G V + T+E A+K ++ + +D+ V T + + L + + +L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 68 DVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
+ +LY V EY++ DL H+ F +P + + +I G+ + S +++R
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF-KEPHAV-FYAAEIAIGLFFLQSKGIIYR 466
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAF---GIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
DLK N+++D + +K+ADFG+ + G+ + F
Sbjct: 467 DLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCG--------------------- 504
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
T Y APEI+ + Y VD W+ G + EM+ + F G+ E DELF
Sbjct: 505 -----------TPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELF 551
Query: 244 KIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSR 303
+ S+ + A+PK SKE + + L + P +
Sbjct: 552 Q-----------------SIMEHNVAYPKSMSKEAVAICKGL-----------MTKHPGK 583
Query: 304 RITA-----RSALEHEYFRDVEF 321
R+ R EH +FR +++
Sbjct: 584 RLGCGPEGERDIKEHAFFRYIDW 606
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 137 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 172
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 173 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 80 AVV-SEEPIYIVMEYMSKGCLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 134
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 135 YVHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 180
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 181 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 140/334 (41%), Gaps = 69/334 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNET------IALKKIRLEQEDEGVPSTAIREISL 54
++ +E ++ +G G YG V+ R ++T LKK + Q+ + T L
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +V L +E KL+L+ +Y++ +L H+ F ++ ++ +I+
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE--VQIYVGEIVL 170
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ + H +++RD+K +N+L+D + + L DFGL++ F V T + G
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVV-LTDFGLSKEF---VADETERAYDFCG---- 222
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGS-RHYSTPVDVWSVGCIFAEMVNQRPL 232
T+ Y AP+I+ G + VD WS+G + E++
Sbjct: 223 ---------------------TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDL 292
F D E + +I R + KS P +P +E+ + + DL
Sbjct: 262 FTVDGEKNSQAEISRRI----------------LKSE-PPYP-QEMSALAK-------DL 296
Query: 293 LSKMLCMDPSRRI-----TARSALEHEYFRDVEF 321
+ ++L DP +R+ A EH +F+ + +
Sbjct: 297 IQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW 330
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 80 AVV-SEEPIYIVIEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 134
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 135 YVHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 180
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 181 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 137 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 172
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 173 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 142 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 177
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
K W APE L ++ +S DVW+ G + E+
Sbjct: 178 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIAT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 128 LKPQNLLIDRRTNALKLADFGLAR 151
L +N L+ + +K+ADFGL+R
Sbjct: 135 LAARNCLVG-ENHLVKVADFGLSR 157
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 7 VEKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLK-EMQHGN 62
+E++GE +G VYK +T A+ L+ + EG R ++L+ +QH N
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 90
Query: 63 IVRLQDVVHSEKKLYLVFEYLDL-DLKKHM-----DSCPDFANDPRLIKTFL-------- 108
+V L VV ++ L ++F Y DL + + S +D R +K+ L
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 109 -YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGS 167
QI G+ Y SH V+H+DL +N+L+ + N +K++D GL R
Sbjct: 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN-VKISDLGLFREV-------------- 195
Query: 168 TGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
++ Y++L SL+ + + APE ++ + +S D+WS G + E+
Sbjct: 196 ------YAADYYKLLGNSLL-------PIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEVF 241
Query: 228 N---QRPLFPGDSEIDELFKIFRVLGTPNE 254
+ Q + ++ E+ + +VL P++
Sbjct: 242 SYGLQPYCGYSNQDVVEMIRNRQVLPCPDD 271
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 51/270 (18%)
Query: 7 VEKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLK-EMQHGN 62
+E++GE +G VYK +T A+ L+ + EG R ++L+ +QH N
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73
Query: 63 IVRLQDVVHSEKKLYLVFEYLDL-DLKKHM-----DSCPDFANDPRLIKTFL-------- 108
+V L VV ++ L ++F Y DL + + S +D R +K+ L
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 109 -YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGS 167
QI G+ Y SH V+H+DL +N+L+ + N +K++D GL R
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN-VKISDLGLFREV-------------- 178
Query: 168 TGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
++ Y++L SL+ + + APE ++ + +S D+WS G + E+
Sbjct: 179 ------YAADYYKLLGNSLL-------PIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEVF 224
Query: 228 N---QRPLFPGDSEIDELFKIFRVLGTPNE 254
+ Q + ++ E+ + +VL P++
Sbjct: 225 SYGLQPYCGYSNQDVVEMIRNRQVLPCPDD 254
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 45/233 (19%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 68 DVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
VV SE+ +Y+V EY++ LD K + P+L+ QI G+AY
Sbjct: 77 AVV-SEEPIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVD-MSAQIASGMAYVERMNY 132
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL+ N+L+ K+ADFGLA R W +
Sbjct: 133 VHRDLRAANILVGENL-VCKVADFGLA-------RLIEDNEWTAR--------------- 169
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
Q K W APE L R ++ DVWS G + E+ + R +PG
Sbjct: 170 -----QGAKFPIKW-TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 97/241 (40%), Gaps = 50/241 (20%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPST---AIREISLLKEMQHGNIV 64
E IG G +G VY+A + +A+K R DE + T +E L ++H NI+
Sbjct: 13 EIIGIGGFGKVYRA--FWIGDEVAVKAAR-HDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 65 RLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR-- 122
L+ V E L LV E+ + S P ++ + QI RG+ Y H
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP--PDILVNWAVQIARGMNYLHDEAIV 127
Query: 123 -VLHRDLKPQNLLI-------DRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
++HRDLK N+LI D LK+ DFGLAR + RT G+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH---RTTKMSAAGAYA----- 179
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFP 234
+ APE++ S +S DVWS G + E++ F
Sbjct: 180 -----------------------WMAPEVIRAS-MFSKGSDVWSYGVLLWELLTGEVPFR 215
Query: 235 G 235
G
Sbjct: 216 G 216
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 76/330 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+++E ++ +G+GT+G V + T A+K ++ E +DE + + E +L+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVLQN 64
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F+ D + + +I+ +
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSALD 122
Query: 117 YCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS + V++RDLK +NL++D+ + +K+ DFGL + GI
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKE----------------GIK---- 161
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFP 234
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 162 -------DGATMKXFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 211
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
D E K+F ++ E +P R L P LLS
Sbjct: 212 QDHE-----KLFELI-LMEEIRFP------------------------RTLGPEAKSLLS 241
Query: 295 KMLCMDPSRRI-----TARSALEHEYFRDV 319
+L DP +R+ A+ ++H +F +
Sbjct: 242 GLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 271
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 82/333 (24%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+++E ++ +G+GT+G V + T A+K ++ E +DE + + E +L+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVLQN 207
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F+ D + + +I+ +
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSALD 265
Query: 117 YCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAF---GIPVRTFTHEHWGSTGISI 172
Y HS + V++RDLK +NL++D+ + +K+ DFGL + G ++TF
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCG---------- 314
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-P 231
T Y APE+ L Y VD W +G + EM+ R P
Sbjct: 315 ----------------------TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
+ D E K+F ++ + FP R L P
Sbjct: 352 FYNQDHE-----KLFELILME--------------EIRFP-----------RTLGPEAKS 381
Query: 292 LLSKMLCMDPSRRI-----TARSALEHEYFRDV 319
LLS +L DP +R+ A+ ++H +F +
Sbjct: 382 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 414
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 82/333 (24%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+++E ++ +G+GT+G V + T A+K ++ E +DE + + E +L+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVLQN 204
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F+ D + + +I+ +
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSALD 262
Query: 117 YCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAF---GIPVRTFTHEHWGSTGISI 172
Y HS + V++RDLK +NL++D+ + +K+ DFGL + G ++TF
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCG---------- 311
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-P 231
T Y APE+ L Y VD W +G + EM+ R P
Sbjct: 312 ----------------------TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGID 291
+ D E K+F ++ + FP R L P
Sbjct: 349 FYNQDHE-----KLFELILME--------------EIRFP-----------RTLGPEAKS 378
Query: 292 LLSKMLCMDPSRRI-----TARSALEHEYFRDV 319
LLS +L DP +R+ A+ ++H +F +
Sbjct: 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 70
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 71 AVV-SEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 125
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 126 YVHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 171
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 172 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 133/323 (41%), Gaps = 41/323 (12%)
Query: 2 DQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ- 59
D Y+ E + GEG + V N +T++ A+K I E++ + S RE+ +L + Q
Sbjct: 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFREVEMLYQCQG 69
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H N++ L + E + YLVFE + + H+ F + + + + +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHF--NELEASVVVQDVASALDFL 127
Query: 119 HSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
H+ + HRDLKP+N+L + + + +K+ DF L + G S
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL------------NGDCSPIST 175
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
GS +VV + I Y D+WS+G I +++ P F G
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASI------YDKRCDLWSLGVILYILLSGYPPFVGR 229
Query: 237 SEIDELFKIFRVLGTPNEDTWPGVTSL--PDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
D G + P ++ + ++P K+ ++ A DL+S
Sbjct: 230 CGSD--------CGWDRGEACPACQNMLFESIQEGKYEFPDKDWA----HISCAAKDLIS 277
Query: 295 KMLCMDPSRRITARSALEHEYFR 317
K+L D +R++A L+H + +
Sbjct: 278 KLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 68
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 69 AVV-SEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 123
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 124 YVHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 169
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 170 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 80 AVV-SEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 134
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 135 YVHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 180
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 181 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 76/330 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+++E ++ +G+GT+G V + T A+K ++ E +DE + + E +L+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVLQN 65
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F+ D + + +I+ +
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSALD 123
Query: 117 YCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS + V++RDLK +NL++D+ + +K+ DFGL + GI
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKE----------------GIK---- 162
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFP 234
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 163 -------DGATMKXFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 212
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
D E K+F ++ E +P R L P LLS
Sbjct: 213 QDHE-----KLFELI-LMEEIRFP------------------------RTLGPEAKSLLS 242
Query: 295 KMLCMDPSRRI-----TARSALEHEYFRDV 319
+L DP +R+ A+ ++H +F +
Sbjct: 243 GLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 272
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 80 AVV-SEEPIYIVCEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 134
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 135 YVHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 180
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 181 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 76/330 (23%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE---QEDEGVPSTAIREISLLKE 57
M+++E ++ +G+GT+G V + T A+K ++ E +DE + + E +L+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVLQN 66
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+H + L+ + +L V EY + +L H+ F+ D + + +I+ +
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED--RARFYGAEIVSALD 124
Query: 117 YCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
Y HS + V++RDLK +NL++D+ + +K+ DFGL + GI
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKE----------------GIK---- 163
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR-PLFP 234
G+ + F T Y APE+ L Y VD W +G + EM+ R P +
Sbjct: 164 -------DGATMKXFCG--TPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 213
Query: 235 GDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLS 294
D E K+F ++ E +P R L P LLS
Sbjct: 214 QDHE-----KLFELI-LMEEIRFP------------------------RTLGPEAKSLLS 243
Query: 295 KMLCMDPSRRI-----TARSALEHEYFRDV 319
+L DP +R+ A+ ++H +F +
Sbjct: 244 GLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 273
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 45/233 (19%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 68 DVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
VV SE+ +Y+V EY++ LD K + P+L+ QI G+AY
Sbjct: 77 AVV-SEEPIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVD-MSAQIASGMAYVERMNY 132
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 133 VHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK------------ 177
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 178 --------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 80 AVV-SEEPIYIVTEYMSKGCLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 134
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 135 YVHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 180
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 181 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQLY 79
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 80 AVV-SEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 134
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 135 YVHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 180
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 181 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 129/319 (40%), Gaps = 46/319 (14%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRL 66
E +GEG Y V A + + A+K I E++ S RE+ L + Q + NI+ L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 67 QDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
+ + + YLVFE L + H+ F + R + + + + H+ + H
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHF--NEREASRVVRDVAAALDFLHTKGIAH 134
Query: 126 RDLKPQNLLID--RRTNALKLADFGLARAFGI-----PVRTFTHEHWGSTGISIYFSFLR 178
RDLKP+N+L + + + +K+ DF L + P+ T E G + Y
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPIT--TPELTTPCGSAEY----- 187
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSE 238
+A ++ F T Y D+WS+G + M++ P F G
Sbjct: 188 ---MAPEVVEVFTDQATF-------------YDKRCDLWSLGVVLYIMLSGYPPFVGHCG 231
Query: 239 IDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLC 298
D + V + S+ + K FP + + + DL+SK+L
Sbjct: 232 ADCGWDRGEVCRVCQNKLF---ESIQEGKYEFPDKDWAHISSEAK-------DLISKLLV 281
Query: 299 MDPSRRITARSALEHEYFR 317
D +R++A L+H + +
Sbjct: 282 RDAKQRLSAAQVLQHPWVQ 300
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 80 AVV-SEEPIYIVIEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 134
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGLAR +E G
Sbjct: 135 YVHRDLRAANILVGENL-VCKVADFGLARLIE------DNEXTARQGAKFPIK------- 180
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 181 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 45/233 (19%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 68 DVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
VV SE+ +Y+V EY+ LD K + P+L+ QI G+AY
Sbjct: 246 AVV-SEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVD-MAAQIASGMAYVERMNY 301
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL+ N+L+ K+ADFGLAR I +T
Sbjct: 302 VHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTAR-------------------- 338
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
Q K W APE L R ++ DVWS G + E+ + R +PG
Sbjct: 339 -----QGAKFPIKW-TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 45/233 (19%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 68 DVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
VV SE+ +Y+V EY+ LD K + P+L+ QI G+AY
Sbjct: 246 AVV-SEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVD-MAAQIASGMAYVERMNY 301
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL+ N+L+ K+ADFGLAR I +T
Sbjct: 302 VHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTAR-------------------- 338
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
Q K W APE L R ++ DVWS G + E+ + R +PG
Sbjct: 339 -----QGAKFPIKW-TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 45/233 (19%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 72
Query: 68 DVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
VV SE+ +Y+V EY+ LD K + P+L+ QI G+AY
Sbjct: 73 AVV-SEEPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVD-MAAQIASGMAYVERMNY 128
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL+ N+L+ K+ADFGLAR I +T I
Sbjct: 129 VHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK------------ 173
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 174 --------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 45/233 (19%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 328
Query: 68 DVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
VV SE+ +Y+V EY+ LD K + P+L+ QI G+AY
Sbjct: 329 AVV-SEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVD-MAAQIASGMAYVERMNY 384
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL+ N+L+ K+ADFGLAR I +T
Sbjct: 385 VHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTAR-------------------- 421
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
Q K W APE L R ++ DVWS G + E+ + R +PG
Sbjct: 422 -----QGAKFPIKW-TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 80 AVV-SEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 134
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL N+L+ K+ADFGLAR I +T I
Sbjct: 135 YVHRDLAAANILVGENL-VCKVADFGLARL--IEDNEYTARQGAKFPIK----------- 180
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 181 ---------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 45/233 (19%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 68 DVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
VV SE+ +Y+V EY+ LD K + P+L+ QI G+AY
Sbjct: 246 AVV-SEEPIYIVGEYMSKGSLLDFLK--GETGKYLRLPQLVD-MAAQIASGMAYVERMNY 301
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL+ N+L+ K+ADFGLAR I +T
Sbjct: 302 VHRDLRAANILVGENL-VCKVADFGLARL--IEDNEYTAR-------------------- 338
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
Q K W APE L R ++ DVWS G + E+ + R +PG
Sbjct: 339 -----QGAKFPIKW-TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 42/230 (18%)
Query: 10 IGEGTYGVVYKARNCVTN-----ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
IG+G++G V AR+ + + K I ++E++ + S R + LLK ++H +V
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE--RNV-LLKNVKHPFLV 102
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
L + KLY V +Y++ +L H+ F +PR + + +I + Y HS +
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL-EPR-ARFYAAEIASALGYLHSLNI 160
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
++RDLKP+N+L+D + + + L DFGL + EH +T
Sbjct: 161 VYRDLKPENILLDSQGHIV-LTDFGLCKE--------NIEHNSTTS-----------TFC 200
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
G T Y APE+ L + Y VD W +G + EM+ P F
Sbjct: 201 G----------TPEYLAPEV-LHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HR+
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 382
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 383 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 418
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
K W APE L ++ +S DVW+ G + E+
Sbjct: 419 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIA 452
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGNMSPEAFLQEAQVMKKLRHEKLVQLY 246
Query: 68 DVVHSEKKLYLVFEYLD----LD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VV SE+ +Y+V EY+ LD LK M + P+L+ QI G+AY
Sbjct: 247 AVV-SEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVD-MAAQIASGMAYVERMN 301
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL+ N+L+ K+ADFGL R I +T
Sbjct: 302 YVHRDLRAANILVGENL-VCKVADFGLGRL--IEDNEYTAR------------------- 339
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
Q K W APE L R ++ DVWS G + E+ + R +PG
Sbjct: 340 ------QGAKFPIKW-TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G +G VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 128 LKPQNLLIDRRTNALKLADFGLAR 151
L +N L+ + +K+ADFGL+R
Sbjct: 135 LAARNCLVG-ENHLVKVADFGLSR 157
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 47/262 (17%)
Query: 9 KIGEGTYGVVYKARN---CVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
++GEG +G V+ A C + I + L+ + RE LL +QH +IV+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 66 LQDVVHSEKKLYLVFEYLDL-DLKKHMDS-CPDF-----ANDPRLIKT-----FLYQILR 113
V L +VFEY+ DL K + + PD N P + QI
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y S +HRDL +N L+ +K+ DFG++R
Sbjct: 140 GMVYLASQHFVHRDLATRNCLVGENL-LVKIGDFGMSRDV-------------------- 178
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV--NQRP 231
+S YRV +++ + + PE ++ R ++T DVWS+G + E+ ++P
Sbjct: 179 YSTDYYRVGGHTML-------PIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQP 230
Query: 232 LFP-GDSEIDELFKIFRVLGTP 252
+ ++E+ E RVL P
Sbjct: 231 WYQLSNNEVIECITQGRVLQRP 252
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C + ++ QI + Y +HR+
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 340
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 341 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 376
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
K W APE L ++ +S DVW+ G + E+
Sbjct: 377 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIA 410
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 63/282 (22%)
Query: 46 STAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLI 104
+ A+ E +L+++ +V L ++ L LV ++ DLK H+
Sbjct: 229 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ +I G+ H R+++RDLKP+N+L+D + ++++D GLA H
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGH-IRISDLGLA----------VHVP 337
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
G T + G +V T+ Y APE++ R+ +P D W++GC+
Sbjct: 338 EGQT-------------IKG-------RVGTVGYMAPEVVKNERYTFSP-DWWALGCLLY 376
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
EM+ G S + K + E+ V +P+ S
Sbjct: 377 EMI------AGQSPFQQRKKKIK-----REEVERLVKEVPEEYS--------------ER 411
Query: 285 LEPAGIDLLSKMLCMDPSRRI-----TARSALEHEYFRDVEF 321
P L S++LC DP+ R+ +AR EH F+ + F
Sbjct: 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF 453
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 63/282 (22%)
Query: 46 STAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLI 104
+ A+ E +L+++ +V L ++ L LV ++ DLK H+
Sbjct: 229 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 105 KTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+ +I G+ H R+++RDLKP+N+L+D + ++++D GLA H
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGH-IRISDLGLA----------VHVP 337
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
G T + G +V T+ Y APE++ R+ +P D W++GC+
Sbjct: 338 EGQT-------------IKG-------RVGTVGYMAPEVVKNERYTFSP-DWWALGCLLY 376
Query: 225 EMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRN 284
EM+ G S + K + E+ V +P+ S
Sbjct: 377 EMIA------GQSPFQQRKKKIK-----REEVERLVKEVPEEYS--------------ER 411
Query: 285 LEPAGIDLLSKMLCMDPSRRI-----TARSALEHEYFRDVEF 321
P L S++LC DP+ R+ +AR EH F+ + F
Sbjct: 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF 453
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 49/232 (21%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTA---IREISLLKEMQHGN 62
+EK+G+G++GVV + + + +T+++ L+ + P IRE++ + + H N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKT---FLYQILRG 114
++RL VV + + +V E L L+KH L+ T + Q+ G
Sbjct: 83 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHF--------LLGTLSRYAVQVAEG 133
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y S R +HRDL +NLL+ R + +K+ DFGL RA +H+
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRAL-----PQNDDHY--------- 178
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
++Q + V + APE L +R +S D W G EM
Sbjct: 179 ------------VMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 217
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 132/336 (39%), Gaps = 76/336 (22%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL------QDCPK-ARREVELHWRAS 112
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R I
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGE 172
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ T +H S
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------ETTSH---NSLTTP 223
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRP 231
Y T +Y APE+ LG Y D WS+G I ++ P
Sbjct: 224 CY---------------------TPYYVAPEV-LGPEKYDKSCDXWSLGVIXYILLCGYP 261
Query: 232 LFPGDSEIDELFKIFRVLGTPNEDT--WPGVTSLPDFKSAFPKWP--SKELGTVVRNLEP 287
F + + +P T G P+ P+W S+E+ ++RNL
Sbjct: 262 PF---------YSNHGLAISPGXKTRIRXGQYEFPN-----PEWSEVSEEVKXLIRNL-- 305
Query: 288 AGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 323
L +P++R T H + VP
Sbjct: 306 ---------LKTEPTQRXTITEFXNHPWIXQSTKVP 332
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
K+G G YG VY+ + T+A+K ++ ED ++E +++KE++H N+V+L
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
V E Y++ E++ +L ++ C ++ QI + Y +HR+
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN 343
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
L +N L+ + +K+ADFGL+R TG + Y AG+
Sbjct: 344 LAARNCLVG-ENHLVKVADFGLSRLM--------------TGDT-------YTAHAGA-- 379
Query: 188 LQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
K W APE L ++ +S DVW+ G + E+
Sbjct: 380 ----KFPIKW-TAPESLAYNK-FSIKSDVWAFGVLLWEIA 413
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 47/227 (20%)
Query: 10 IGEGTYGVVYKARNCVTNETIALK-----KIRLEQEDEGVPSTAIREISLLKEMQHGN-- 62
IG G +G VY R T + A+K +I+++Q + + A+ E +L + G+
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE----TLALNERIMLSLVSTGDCP 252
Query: 63 -IVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
IV + H+ KL + + ++ DL H+ F+ ++ + +I+ G+ + H+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD--MRFYAAEIILGLEHMHN 310
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
V++RDLKP N+L+D + ++++D GLA F + H G+ G
Sbjct: 311 RFVVYRDLKPANILLDEHGH-VRISDLGLACDFS---KKKPHASVGTHG----------- 355
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
Y APE+L Y + D +S+GC+ +++
Sbjct: 356 -----------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 47/227 (20%)
Query: 10 IGEGTYGVVYKARNCVTNETIALK-----KIRLEQEDEGVPSTAIREISLLKEMQHGN-- 62
IG G +G VY R T + A+K +I+++Q + + A+ E +L + G+
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE----TLALNERIMLSLVSTGDCP 252
Query: 63 -IVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
IV + H+ KL + + ++ DL H+ F+ ++ + +I+ G+ + H+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD--MRFYAAEIILGLEHMHN 310
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
V++RDLKP N+L+D + ++++D GLA F + H G+ G
Sbjct: 311 RFVVYRDLKPANILLDEHGH-VRISDLGLACDFS---KKKPHASVGTHG----------- 355
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
Y APE+L Y + D +S+GC+ +++
Sbjct: 356 -----------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 47/227 (20%)
Query: 10 IGEGTYGVVYKARNCVTNETIALK-----KIRLEQEDEGVPSTAIREISLLKEMQHGN-- 62
IG G +G VY R T + A+K +I+++Q + + A+ E +L + G+
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE----TLALNERIMLSLVSTGDCP 251
Query: 63 -IVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
IV + H+ KL + + ++ DL H+ F+ ++ + +I+ G+ + H+
Sbjct: 252 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD--MRFYAAEIILGLEHMHN 309
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
V++RDLKP N+L+D + ++++D GLA F + H G+ G
Sbjct: 310 RFVVYRDLKPANILLDEHGH-VRISDLGLACDFS---KKKPHASVGTHG----------- 354
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
Y APE+L Y + D +S+GC+ +++
Sbjct: 355 -----------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 47/227 (20%)
Query: 10 IGEGTYGVVYKARNCVTNETIALK-----KIRLEQEDEGVPSTAIREISLLKEMQHGN-- 62
IG G +G VY R T + A+K +I+++Q + + A+ E +L + G+
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE----TLALNERIMLSLVSTGDCP 252
Query: 63 -IVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
IV + H+ KL + + ++ DL H+ F+ ++ + +I+ G+ + H+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD--MRFYAAEIILGLEHMHN 310
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
V++RDLKP N+L+D + ++++D GLA F + H G+ G
Sbjct: 311 RFVVYRDLKPANILLDEHGH-VRISDLGLACDFS---KKKPHASVGTHG----------- 355
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
Y APE+L Y + D +S+GC+ +++
Sbjct: 356 -----------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 91/224 (40%), Gaps = 41/224 (18%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
++G G++G V++ + T A+KK+RLE E+ + IV L
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLE-------VFRAEELMACAGLTSPRIVPLYG 152
Query: 69 VVHSEKKLYLVFEYLDL----DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
V + + E L+ L K P+ D L +L Q L G+ Y HS R+L
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALY--YLGQALEGLEYLHSRRIL 207
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
H D+K N+L+ + L DFG A + + L +L G
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHA-------------------VCLQPDGLGKSLLTG 248
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
I T + APE++LG R VDVWS C+ M+N
Sbjct: 249 DYIPG-----TETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLN 286
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 41/224 (18%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
++G G++G V++ ++ T A+KK+RLE + E+ + IV L
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYG 117
Query: 69 VVHSEKKLYLVFEYLDL----DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
V + + E L+ L K M P+ D L +L Q L G+ Y H+ R+L
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALY--YLGQALEGLEYLHTRRIL 172
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
H D+K N+L+ + L DFG A + + L +L G
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHA-------------------LCLQPDGLGKSLLTG 213
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
I T + APE+++G + VD+WS C+ M+N
Sbjct: 214 DYIPG-----TETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLN 251
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 49/232 (21%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTA---IREISLLKEMQHGN 62
+EK+G+G++GVV + + + +T+++ L+ + P IRE++ + + H N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKT---FLYQILRG 114
++RL VV + + +V E L L+KH L+ T + Q+ G
Sbjct: 77 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHF--------LLGTLSRYAVQVAEG 127
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y S R +HRDL +NLL+ R + +K+ DFGL RA +H+
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRAL-----PQNDDHY--------- 172
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
++Q + V + APE L +R +S D W G EM
Sbjct: 173 ------------VMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 211
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 46/235 (19%)
Query: 9 KIGEGTYGVVYKAR--NCVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEMQHGNIVR 65
++GEG +G V+ A N + + L ++ L++ E RE LL +QH +IVR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 66 LQDVVHSEKKLYLVFEYL---DLD--LKKH------MDSCPDFANDPRLIKTFLY---QI 111
V + L +VFEY+ DL+ L+ H + D A P + L Q+
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
G+ Y +HRDL +N L+ + +K+ DFG++R
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDI------------------ 208
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
+S YRV +++ + + PE +L R ++T DVWS G + E+
Sbjct: 209 --YSTDYYRVGGRTML-------PIRWMPPESIL-YRKFTTESDVWSFGVVLWEI 253
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 49/232 (21%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTA---IREISLLKEMQHGN 62
+EK+G+G++GVV + + + +T+++ L+ + P IRE++ + + H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKT---FLYQILRG 114
++RL VV + + +V E L L+KH L+ T + Q+ G
Sbjct: 73 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHF--------LLGTLSRYAVQVAEG 123
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y S R +HRDL +NLL+ R + +K+ DFGL RA +H+
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRAL-----PQNDDHY--------- 168
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
++Q + V + APE L +R +S D W G EM
Sbjct: 169 ------------VMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 49/232 (21%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTA---IREISLLKEMQHGN 62
+EK+G+G++GVV + + + +T+++ L+ + P IRE++ + + H N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKT---FLYQILRG 114
++RL VV + + +V E L L+KH L+ T + Q+ G
Sbjct: 77 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHF--------LLGTLSRYAVQVAEG 127
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y S R +HRDL +NLL+ R + +K+ DFGL RA +H+
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRAL-----PQNDDHY--------- 172
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
++Q + V + APE L +R +S D W G EM
Sbjct: 173 ------------VMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 211
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 56/282 (19%)
Query: 50 REISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDP-------- 101
E+ ++ ++++ + + ++ + ++Y+++EY++ D D F D
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF-FVLDKNYTCFIPI 150
Query: 102 RLIKTFLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF 160
++IK + +L +Y H+ + + HRD+KP N+L+D + +KL+DFG +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD-KNGRVKLSDFGESEYM------V 203
Query: 161 THEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYS-TPVDVWSV 219
+ GS G T + PE Y+ VD+WS+
Sbjct: 204 DKKIKGSRG-------------------------TYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 220 G-CIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKEL 278
G C++ N P S L ++F + T N P ++ F + +
Sbjct: 239 GICLYVMFYNVVPFSLKIS----LVELFNNIRTKN-------IEYPLDRNHFLYPLTNKK 287
Query: 279 GTVVRN-LEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 319
T N L ID L L +P+ RIT+ AL+HE+ D
Sbjct: 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 40/226 (17%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
V++IG G +G+V+ + + +A+K IR EG S I E ++ ++ H +V
Sbjct: 12 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+L V + + LVFE+++ L ++ + L+ L + G+AY V
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEASV 124
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL +N L+ +K++DFG+ R ++ STG
Sbjct: 125 IHRDLAARNCLVGE-NQVIKVSDFGMTRF------VLDDQYTSSTGT------------- 164
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
K W +PE+ SR YS+ DVWS G + E+ ++
Sbjct: 165 --------KFPVKW-ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSE 200
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 36/237 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN-IVRL 66
+KIG G +G + +N TNE +A I+LE P + E K++ G+ I ++
Sbjct: 15 KKIGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL-EYRFYKQLGSGDGIPQV 70
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
K +V E L L+ D C D + + Q++ + Y HS +++R
Sbjct: 71 YYFGPCGKYNAMVLELLGPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYR 129
Query: 127 DLKPQNLLIDRRTN----ALKLADFGLARAFGIPVRTFTH----EHWGSTGISIYFSF-- 176
D+KP+N LI R N + + DFGLA+ + I T H EH TG + Y S
Sbjct: 130 DVKPENFLIGRPGNKTQQVIHIIDFGLAKEY-IDPETKKHIPYREHKSLTGTARYMSINT 188
Query: 177 -----------------LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDV 216
+ L GSL Q LK TL R +I G +TP++V
Sbjct: 189 HLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI--GDTKRATPIEV 243
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 41/224 (18%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
++G G++G V++ ++ T A+KK+RLE + E+ + IV L
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYG 133
Query: 69 VVHSEKKLYLVFEYLDL----DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
V + + E L+ L K M P+ D L +L Q L G+ Y H+ R+L
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALY--YLGQALEGLEYLHTRRIL 188
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
H D+K N+L+ + L DFG A + + L +L G
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHA-------------------LCLQPDGLGKSLLTG 229
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
I T + APE+++G + VD+WS C+ M+N
Sbjct: 230 DYIPG-----TETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLN 267
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 112/266 (42%), Gaps = 52/266 (19%)
Query: 9 KIGEGTYGVVYKARNCV----TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
++GEG +G V+ A C T + + + L+ RE LL +QH +IV
Sbjct: 22 ELGEGAFGKVFLA-ECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 65 RLQDVVHSEKKLYLVFEYL---DLD--LKKH-------MDSCPDFANDPRLIKTFLY--- 109
+ V L +VFEY+ DL+ L+ H +D P A + L+
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 110 QILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTG 169
QI G+ Y S +HRDL +N L+ +K+ DFG++R
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANL-LVKIGDFGMSRDV---------------- 183
Query: 170 ISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV-- 227
+S YRV +++ + + PE ++ R ++T DVWS G I E+
Sbjct: 184 ----YSTDYYRVGGHTML-------PIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTY 231
Query: 228 NQRPLFP-GDSEIDELFKIFRVLGTP 252
++P F ++E+ E RVL P
Sbjct: 232 GKQPWFQLSNTEVIECITQGRVLERP 257
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 49/232 (21%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTA---IREISLLKEMQHGN 62
+EK+G+G++GVV + + + +T+++ L+ + P IRE++ + + H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKT---FLYQILRG 114
++RL VV + + +V E L L+KH L+ T + Q+ G
Sbjct: 73 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHF--------LLGTLSRYAVQVAEG 123
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y S R +HRDL +NLL+ R + +K+ DFGL RA +H+
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRAL-----PQNDDHY--------- 168
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
++Q + V + APE L +R +S D W G EM
Sbjct: 169 ------------VMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 207
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 91/224 (40%), Gaps = 41/224 (18%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
++G G++G V++ + T A+KK+RLE E+ + IV L
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLE-------VFRAEELMACAGLTSPRIVPLYG 133
Query: 69 VVHSEKKLYLVFEYLDL----DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
V + + E L+ L K P+ D L +L Q L G+ Y HS R+L
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALY--YLGQALEGLEYLHSRRIL 188
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
H D+K N+L+ + L DFG A + + L +L G
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHA-------------------VCLQPDGLGKDLLTG 229
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
I T + APE++LG R VDVWS C+ M+N
Sbjct: 230 DYIPG-----TETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLN 267
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 49/232 (21%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTA---IREISLLKEMQHGN 62
+EK+G+G++GVV + + + +T+++ L+ + P IRE++ + + H N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKT---FLYQILRG 114
++RL VV + + +V E L L+KH L+ T + Q+ G
Sbjct: 83 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHF--------LLGTLSRYAVQVAEG 133
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y S R +HRDL +NLL+ R + +K+ DFGL RA +H
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRAL-----PQNDDH---------- 177
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
++Q + V + APE L +R +S D W G EM
Sbjct: 178 -----------XVMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 41/224 (18%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
++G G++G V++ ++ T A+KK+RLE + E+ + IV L
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VFRVEELVACAGLSSPRIVPLYG 131
Query: 69 VVHSEKKLYLVFEYLDL----DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
V + + E L+ L K M P+ D L +L Q L G+ Y H+ R+L
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALY--YLGQALEGLEYLHTRRIL 186
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
H D+K N+L+ + L DFG A + + L +L G
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHA-------------------LCLQPDGLGKSLLTG 227
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
I T + APE+++G + VD+WS C+ M+N
Sbjct: 228 DYI-----PGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLN 265
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 46/235 (19%)
Query: 9 KIGEGTYGVVYKAR--NCVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEMQHGNIVR 65
++GEG +G V+ A N + + L ++ L++ E RE LL +QH +IVR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 66 LQDVVHSEKKLYLVFEYL---DLD--LKKH------MDSCPDFANDPRLIKTFLY---QI 111
V + L +VFEY+ DL+ L+ H + D A P + L Q+
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
G+ Y +HRDL +N L+ + +K+ DFG++R
Sbjct: 139 AAGMVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDI------------------ 179
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
+S YRV +++ + + PE +L R ++T DVWS G + E+
Sbjct: 180 --YSTDYYRVGGRTML-------PIRWMPPESIL-YRKFTTESDVWSFGVVLWEI 224
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P AN+P L L ++++ G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 152 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTR 186
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 46/235 (19%)
Query: 9 KIGEGTYGVVYKAR--NCVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEMQHGNIVR 65
++GEG +G V+ A N + + L ++ L++ E RE LL +QH +IVR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 66 LQDVVHSEKKLYLVFEYL---DLD--LKKH------MDSCPDFANDPRLIKTFLY---QI 111
V + L +VFEY+ DL+ L+ H + D A P + L Q+
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 112 LRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
G+ Y +HRDL +N L+ + +K+ DFG++R
Sbjct: 145 AAGMVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDI------------------ 185
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
+S YRV +++ + + PE +L R ++T DVWS G + E+
Sbjct: 186 --YSTDYYRVGGRTML-------PIRWMPPESIL-YRKFTTESDVWSFGVVLWEI 230
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P AN+P L L ++++ G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 142 AYLNANKFVHRDLAARNCMVAEDFT-VKIGDFGMTR 176
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 43/196 (21%)
Query: 51 EISLLKEMQHG--NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDF-----ANDPRL 103
E+ LLK++ G ++RL D L+ E + + DF A L
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEEL 158
Query: 104 IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHE 163
++F +Q+L + +CH+ VLHRD+K +N+LID LKL DFG
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---------- 208
Query: 164 HWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIF 223
++Y F RV Y PE + R++ VWS+G +
Sbjct: 209 -----KDTVYTDFDGTRV----------------YSPPEWIRYHRYHGRSAAVWSLGILL 247
Query: 224 AEMVNQRPLFPGDSEI 239
+MV F D EI
Sbjct: 248 YDMVCGDIPFEHDEEI 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 40/226 (17%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
V++IG G +G+V+ + + +A+K IR EG S I E ++ ++ H +V
Sbjct: 10 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+L V + + LVFE+++ L ++ + L+ L + G+AY V
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 122
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL +N L+ +K++DFG+ R ++ STG
Sbjct: 123 IHRDLAARNCLVGE-NQVIKVSDFGMTRF------VLDDQYTSSTGT------------- 162
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
K W +PE+ SR YS+ DVWS G + E+ ++
Sbjct: 163 --------KFPVKW-ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSE 198
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 49/232 (21%)
Query: 7 VEKIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTA---IREISLLKEMQHGN 62
+EK+G+G++GVV + + + +T+++ L+ + P IRE++ + + H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKT---FLYQILRG 114
++RL VV + + +V E L L+KH L+ T + Q+ G
Sbjct: 73 LIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHF--------LLGTLSRYAVQVAEG 123
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y S R +HRDL +NLL+ R + +K+ DFGL RA +H
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATR-DLVKIGDFGLMRAL-----PQNDDH---------- 167
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
++Q + V + APE L +R +S D W G EM
Sbjct: 168 -----------XVMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEM 207
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 40/226 (17%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
V++IG G +G+V+ + + +A+K IR EG S I E ++ ++ H +V
Sbjct: 12 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+L V + + LVFE+++ L ++ + L+ L + G+AY V
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 124
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL +N L+ +K++DFG+ R ++ STG
Sbjct: 125 IHRDLAARNCLVGE-NQVIKVSDFGMTRF------VLDDQYTSSTGT------------- 164
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
K W +PE+ SR YS+ DVWS G + E+ ++
Sbjct: 165 --------KFPVKW-ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSE 200
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 40/226 (17%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
V++IG G +G+V+ + + +A+K IR EG S I E ++ ++ H +V
Sbjct: 15 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+L V + + LVFE+++ L ++ + L+ L + G+AY V
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 127
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL +N L+ +K++DFG+ R ++ STG
Sbjct: 128 IHRDLAARNCLVGE-NQVIKVSDFGMTRF------VLDDQYTSSTGT------------- 167
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
K W +PE+ SR YS+ DVWS G + E+ ++
Sbjct: 168 --------KFPVKW-ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSE 203
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 58/366 (15%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + K+G G + V+ + + + +A+K ++ E TA+ EI LLK +++ +
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRNSD 78
Query: 63 --------IVRLQDVVH----SEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
+V+L D + + +VFE L L K + +K + Q
Sbjct: 79 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 138
Query: 111 ILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALK--LADFGLARAFGIPVRTFTHEHWGS 167
+L+G+ Y H+ R++H D+KP+N+L+ ++ A+ + G P + + S
Sbjct: 139 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV---S 195
Query: 168 TGISIYFSFLRYRVLAGSLILQFLKVVTL----W-------------YRAPEILLGSRHY 210
T + +FL + + +K+ L W YR+ E+L+GS Y
Sbjct: 196 TAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG-Y 254
Query: 211 STPVDVWSVGCIFAEMVNQRPLF-PGDSE------------IDELFKIFRVLGTPNEDTW 257
+TP D+WS C+ E+ LF P E I+ L K+ R L + +
Sbjct: 255 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSK 314
Query: 258 PGVTSLPDFKSAFPKWPSKELGTVVRNL-----EPAGI-DLLSKMLCMDPSRRITARSAL 311
T D K P +V E AG D L ML + P +R TA L
Sbjct: 315 EFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECL 374
Query: 312 EHEYFR 317
H +
Sbjct: 375 RHPWLN 380
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 58/366 (15%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + K+G G + V+ + + + +A+K ++ E TA+ EI LLK +++ +
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK---SAEHYTETALDEIRLLKSVRNSD 94
Query: 63 --------IVRLQDVVH----SEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
+V+L D + + +VFE L L K + +K + Q
Sbjct: 95 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 154
Query: 111 ILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALK--LADFGLARAFGIPVRTFTHEHWGS 167
+L+G+ Y H+ R++H D+KP+N+L+ ++ A+ + G P + + S
Sbjct: 155 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV---S 211
Query: 168 TGISIYFSFLRYRVLAGSLILQFLKVVTL----W-------------YRAPEILLGSRHY 210
T + +FL + + +K+ L W YR+ E+L+GS Y
Sbjct: 212 TAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG-Y 270
Query: 211 STPVDVWSVGCIFAEMVNQRPLF-PGDSE------------IDELFKIFRVLGTPNEDTW 257
+TP D+WS C+ E+ LF P E I+ L K+ R L + +
Sbjct: 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSK 330
Query: 258 PGVTSLPDFKSAFPKWPSKELGTVVRNL-----EPAGI-DLLSKMLCMDPSRRITARSAL 311
T D K P +V E AG D L ML + P +R TA L
Sbjct: 331 EFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECL 390
Query: 312 EHEYFR 317
H +
Sbjct: 391 RHPWLN 396
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 30 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 68 DVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
++ +L +V ++ + H + + + + Q RG+ Y H+ ++HRD
Sbjct: 87 GY-STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
LK N+ + N +K+ DFGLA T S + ++ L+GS+
Sbjct: 146 LKSNNIFL-HEDNTVKIGDFGLA-----------------TEKSRWSGSHQFEQLSGSI- 186
Query: 188 LQFLKVVTLWYRAPEI--LLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFK 244
LW APE+ + S YS DV++ G + E M Q P S I+ +
Sbjct: 187 --------LWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY----SNINNRDQ 233
Query: 245 IFRVLG 250
I ++G
Sbjct: 234 IIEMVG 239
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 152 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTR 186
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+ ++G+G +G V Y T +A+K+++ D+ REI +LK +
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 72
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
IV+ + V + + L LV EYL + D + + QI +G+ Y S
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
R +HRDL +N+L++ + +K+ADFGLA+ + + G + I
Sbjct: 133 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---------- 181
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L +S DVWS G + E+
Sbjct: 182 ---------------FWY-APES-LSDNIFSRQSDVWSFGVVLYEL 210
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 146 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTR 180
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 145 AYLNANKFVHRDLAARNCMVAEDF-TVKIGDFGMTR 179
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 146 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTR 180
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 143 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTR 177
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+ ++G+G +G V Y T +A+K+++ D+ REI +LK +
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 85
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
IV+ + V + + L LV EYL + D + + QI +G+ Y S
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
R +HRDL +N+L++ + +K+ADFGLA+ + + G + I
Sbjct: 146 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---------- 194
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L +S DVWS G + E+
Sbjct: 195 ---------------FWY-APES-LSDNIFSRQSDVWSFGVVLYEL 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+ ++G+G +G V Y T +A+K+++ D+ REI +LK +
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 73
Query: 63 IVRLQDVVHS--EKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
IV+ + V + + L LV EYL + D + + QI +G+ Y S
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
R +HRDL +N+L++ + +K+ADFGLA+ + + G + I
Sbjct: 134 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---------- 182
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L +S DVWS G + E+
Sbjct: 183 ---------------FWY-APES-LSDNIFSRQSDVWSFGVVLYEL 211
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 139 AYLNANKFVHRDLAARNCMVAEDF-TVKIGDFGMTR 173
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 142/364 (39%), Gaps = 98/364 (26%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+ K+G+GT+G V ++ + A+K +R + +A E +LK++Q+ +I
Sbjct: 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVR---NIKKYTRSAKIEADILKKIQNDDINNN 96
Query: 67 QDVVHSEKKLY-----LVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
V + K +Y L+FE L L + + IK + +IL+ + Y
Sbjct: 97 NIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156
Query: 122 RVLHRDLKPQNLLID------------------------RRTNALKLADFGLARAFGIPV 157
+ H DLKP+N+L+D ++ +KL DFG A
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA------- 209
Query: 158 RTFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVW 217
TF ++ GS + T YRAPE++L + + D+W
Sbjct: 210 -TFKSDYHGSI------------------------INTRQYRAPEVIL-NLGWDVSSDMW 243
Query: 218 SVGCIFAEMVNQRPLFPGDSEIDE---------------LFKIFRVLGTP--NED----T 256
S GC+ AE+ LF ++ L++ + G+ N+D
Sbjct: 244 SFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLA 303
Query: 257 WP----GVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALE 312
WP + S+ K P L ++++ D L +L +DP+ R + L+
Sbjct: 304 WPENASSINSIKHVKKCLP------LYKIIKH--ELFCDFLYSILQIDPTLRPSPAELLK 355
Query: 313 HEYF 316
H++
Sbjct: 356 HKFL 359
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 18 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 68 DVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
++ +L +V ++ + H + + + + Q RG+ Y H+ ++HRD
Sbjct: 75 GY-STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 133
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
LK N+ + N +K+ DFGLA T S + ++ L+GS+
Sbjct: 134 LKSNNIFL-HEDNTVKIGDFGLA-----------------TVKSRWSGSHQFEQLSGSI- 174
Query: 188 LQFLKVVTLWYRAPEI--LLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFK 244
LW APE+ + S YS DV++ G + E M Q P S I+ +
Sbjct: 175 --------LWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY----SNINNRDQ 221
Query: 245 IFRVLG 250
I ++G
Sbjct: 222 IIEMVG 227
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 145 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTR 179
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 137 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTR 171
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N ++ +K+ DFG+ R
Sbjct: 174 AYLNANKFVHRDLAARNCMVAEDF-TVKIGDFGMTR 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 39/246 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 30 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 68 DVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRD 127
+ +L +V ++ + H + + + + Q RG+ Y H+ ++HRD
Sbjct: 87 GY-STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 128 LKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSLI 187
LK N+ + N +K+ DFGLA T S + ++ L+GS+
Sbjct: 146 LKSNNIFL-HEDNTVKIGDFGLA-----------------TEKSRWSGSHQFEQLSGSI- 186
Query: 188 LQFLKVVTLWYRAPEI--LLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFK 244
LW APE+ + S YS DV++ G + E M Q P S I+ +
Sbjct: 187 --------LWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY----SNINNRDQ 233
Query: 245 IFRVLG 250
I ++G
Sbjct: 234 IIEMVG 239
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
++++G G +GVV K +A+K I+ E +E + ++ H +V+
Sbjct: 13 LKELGSGQFGVV-KLGKWKGQYDVAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLVKF 68
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
V E +Y+V EY+ + +P + Y + G+A+ SH+ +HR
Sbjct: 69 YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128
Query: 127 DLKPQNLLIDRRTNALKLADFGLAR 151
DL +N L+DR +K++DFG+ R
Sbjct: 129 DLAARNCLVDRDL-CVKVSDFGMTR 152
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTMR 66
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + F+ D + + YQ+ +A
Sbjct: 67 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ T+ +KL DFGL+R S Y
Sbjct: 126 YLESKRFVHRDIAARNVLVS-ATDCVKLGDFGLSRYM---------------EDSTY--- 166
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 167 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 216 VKNNDVIGRI 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 37/249 (14%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
+ Y+ V+ IG G +G V R+ + + A+K + + E + E ++
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 61 GNIVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
+V+L +K LY+V EY+ DL M ++ + K + +++ + H
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
S ++HRD+KP N+L+D+ + LKLADFG T TG
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGH-LKLADFG------------TCMKMDETG---------- 228
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILL---GSRHYSTPVDVWSVGCIFAEMVNQRPLFPGD 236
++ V T Y +PE+L G +Y D WSVG EM+ F D
Sbjct: 229 ------MVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 282
Query: 237 SEIDELFKI 245
S + KI
Sbjct: 283 SLVGTYSKI 291
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 110/276 (39%), Gaps = 46/276 (16%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLE--QEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
IG G+Y V R T+ A+K ++ E +DE + + + H +V L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 68 DVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
+E +L+ V EY++ DL HM + + + +I + Y H +++R
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH--ARFYSAEISLALNYLHERGIIYR 145
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+L+D + +KL D+G+ + P T T G+
Sbjct: 146 DLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDT-TSXFCGTPN----------------- 186
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF--------PGDSE 238
Y APEIL G Y VD W++G + EM+ R F P +
Sbjct: 187 -----------YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 234
Query: 239 IDELFKIF--RVLGTPNEDTWPGVTSLPDFKSAFPK 272
D LF++ + + P + + L F + PK
Sbjct: 235 EDYLFQVILEKQIRIPRSMSVKAASVLKSFLNKDPK 270
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGLAR
Sbjct: 163 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLARVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 44/256 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE--QEDEGVPSTAIREISLLKEM 58
+ ++ + IG G+Y V R T+ A+K ++ E +DE + + +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
H +V L +E +L+ V EY++ DL HM + + + +I + Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH--ARFYSAEISLALNY 121
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
H +++RDLK N+L+D + +KL D+G+ + P T T G+
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDT-TSXFCGTPN-------- 171
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF---- 233
Y APEIL G Y VD W++G + EM+ R F
Sbjct: 172 --------------------YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVG 210
Query: 234 ----PGDSEIDELFKI 245
P + D LF++
Sbjct: 211 SSDNPDQNTEDYLFQV 226
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 44/256 (17%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLE--QEDEGVPSTAIREISLLKEM 58
+ ++ + IG G+Y V R T+ A+K ++ E +DE + + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
H +V L +E +L+ V EY++ DL HM + + + +I + Y
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH--ARFYSAEISLALNY 125
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
H +++RDLK N+L+D + +KL D+G+ + P T T G+
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDT-TSXFCGTPN-------- 175
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF---- 233
Y APEIL G Y VD W++G + EM+ R F
Sbjct: 176 --------------------YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVG 214
Query: 234 ----PGDSEIDELFKI 245
P + D LF++
Sbjct: 215 SSDNPDQNTEDYLFQV 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 36/226 (15%)
Query: 7 VEKIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+ ++G+G +G V Y T +A+K+++ D+ REI +LK +
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDF 69
Query: 63 IVRLQDVVHSEKK--LYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHS 120
IV+ + V + + L LV EYL + D + + QI +G+ Y S
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYR 180
R +HRDL +N+L++ + +K+ADFGLA+ + G + I
Sbjct: 130 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPI---------- 178
Query: 181 VLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
WY APE L +S DVWS G + E+
Sbjct: 179 ---------------FWY-APES-LSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
KIG G++G +Y N TNE +A+K LE P + E + + +Q G +
Sbjct: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LENVKTKHPQL-LYESKIYRILQGGTGIPNVR 69
Query: 69 VVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLY---QILRGIAYCHSHRVLH 125
E ++ +DL L ++ +F + +KT L Q++ + + HS LH
Sbjct: 70 WFGVEGDYNVLV--MDL-LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 126
Query: 126 RDLKPQNLL--IDRRTNALKLADFGLARAFGIPVRTFTHEH 164
RD+KP N L + RR N + + DFGLA+ + T TH+H
Sbjct: 127 RDIKPDNFLMGLGRRANQVYIIDFGLAKKY---RDTSTHQH 164
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 36/237 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN-IVRL 66
+KIG G +G + +N TNE +A I+LE P + E K++ G+ I ++
Sbjct: 15 KKIGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL-EYRFYKQLGSGDGIPQV 70
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
K +V E L L+ D C D + + Q++ + Y HS +++R
Sbjct: 71 YYFGPCGKYNAMVLELLGPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYR 129
Query: 127 DLKPQNLLIDRRTN----ALKLADFGLARAFGIPVRTFTH----EHWGSTGISIYFSF-- 176
D+KP+N LI R N + + DF LA+ + I T H EH TG + Y S
Sbjct: 130 DVKPENFLIGRPGNKTQQVIHIIDFALAKEY-IDPETKKHIPYREHKSLTGTARYMSINT 188
Query: 177 -----------------LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDV 216
+ L GSL Q LK TL R +I G +TP++V
Sbjct: 189 HLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI--GDTKRATPIEV 243
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 45/233 (19%)
Query: 9 KIGEGTYGVVYKAR-NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
K+G+G +G V+ N T +A+K ++ P ++E ++K+++H +V+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTR--VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 69
Query: 68 DVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
VV SE+ + +V EY+ LD K + P+L+ QI G+AY
Sbjct: 70 AVV-SEEPIXIVTEYMSKGSLLDFLKGETG--KYLRLPQLVD-MAAQIASGMAYVERMNY 125
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL+ N+L+ K+ADFGLAR +E G
Sbjct: 126 VHRDLRAANILVGENL-VCKVADFGLARLIE------DNEXTARQGAKFPIK-------- 170
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPG 235
+ APE L R ++ DVWS G + E+ + R +PG
Sbjct: 171 --------------WTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 36/237 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN-IVRL 66
+KIG G +G + +N TNE +A I+LE P + E K++ G+ I ++
Sbjct: 36 KKIGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL-EYRFYKQLGSGDGIPQV 91
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
K +V E L L+ D C D + + Q++ + Y HS +++R
Sbjct: 92 YYFGPCGKYNAMVLELLGPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYR 150
Query: 127 DLKPQNLLIDRRTN----ALKLADFGLARAFGIPVRTFTH----EHWGSTGISIYFSF-- 176
D+KP+N LI R N + + DF LA+ + I T H EH TG + Y S
Sbjct: 151 DVKPENFLIGRPGNKTQQVIHIIDFALAKEY-IDPETKKHIPYREHKSLTGTARYMSINT 209
Query: 177 -----------------LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDV 216
+ L GSL Q LK TL R +I G +TP++V
Sbjct: 210 HLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI--GDTKRATPIEV 264
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 51/245 (20%)
Query: 4 YEKVEK-IGEGTYGVVYKAR--------NCVTNETIALKKIRLEQEDEGVPSTAIREISL 54
Y K+E+ IG G +G V + R +CV +T+ ++ + + E S+
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE------FLSEASI 68
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
+ + +H NI+RL+ VV + + ++ E+++ +DS ND + L +LRG
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFME---NGALDSFLRL-NDGQFTVIQLVGMLRG 124
Query: 115 IA----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
IA Y +HRDL +N+L++ K++DFGL+R F E+ +
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSR--------FLEEN---SSD 172
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN-- 228
Y S L + + + + APE + R +++ D WS G + E+++
Sbjct: 173 PTYTSSLGGK-------------IPIRWTAPEA-IAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 229 QRPLF 233
+RP +
Sbjct: 219 ERPYW 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D E + ++G G YGVV K R+ + + +A+K+IR + + ++ +
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCH 119
V + E +++ E +D L K D ++ I++ + + H
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 120 SH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
S V+HRD+KP N+LI+ +K+ DFG
Sbjct: 171 SKLSVIHRDVKPSNVLIN-ALGQVKMCDFG------------------------------ 199
Query: 179 YRVLAGSLILQFLKVVTLW---YRAPEIL---LGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
++G L+ K + Y APE + L + YS D+WS+G E+ R
Sbjct: 200 ---ISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR-- 254
Query: 233 FPGDS 237
FP DS
Sbjct: 255 FPYDS 259
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 43/252 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
+ YE V+ IG G +G V R+ T + A+K + + E + E ++
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 61 GNIVRLQDVVHSEKKLYLVFEYL---DL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+V+L ++ LY+V EY+ DL +L + D +A + + +++ +
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA------RFYTAEVVLALD 182
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
HS +HRD+KP N+L+D ++ LKLADFG
Sbjct: 183 AIHSMGFIHRDVKPDNMLLD-KSGHLKLADFGTC-------------------------- 215
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILL---GSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
++ ++ V T Y +PE+L G +Y D WSVG EM+ F
Sbjct: 216 --MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
Query: 234 PGDSEIDELFKI 245
DS + KI
Sbjct: 274 YADSLVGTYSKI 285
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 42/232 (18%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQD 68
+ EG + VY+A++ + ALK++ +E++ I+E+ +K++ H NIV+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN--RAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 69 VVH--------SEKKLYLVFEYLD---LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
+ + L+ E ++ K M+S + D ++K F YQ R + +
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT-VLKIF-YQTCRAVQH 151
Query: 118 CHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H + ++HRDLK +NLL+ + +KL DFG A + + W +
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQ-GTIKLCDFGSATT----ISHYPDYSWSA-------- 198
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPV----DVWSVGCIF 223
+ R L + + T YR PEI+ + + P+ D+W++GCI
Sbjct: 199 --QRRALVEE---EITRNTTPMYRTPEII--DLYSNFPIGEKQDIWALGCIL 243
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 47/258 (18%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIVR 65
+K+G G +G V+ A + +A+K ++ G S + E +++K +QH +V+
Sbjct: 21 KKLGAGQFGEVWMA-TYNKHTKVAVKTMK-----PGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 66 LQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
L VV E +Y++ E++ LD K + P+LI F QI G+A+
Sbjct: 75 LHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPL--PKLI-DFSAQIAEGMAFIEQR 130
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
+HRDL+ N+L+ + K+ADFGLAR +E+ G
Sbjct: 131 NYIHRDLRAANILVS-ASLVCKIADFGLARVIE------DNEYTAREGA----------- 172
Query: 182 LAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN-QRPLFPGDSEID 240
K W I GS ++ DVWS G + E+V R +PG S +
Sbjct: 173 ----------KFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 220
Query: 241 ELFKIFRVLGTPNEDTWP 258
+ + R P + P
Sbjct: 221 VIRALERGYRMPRPENCP 238
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 4 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREI-SLLKEMQHGN 62
++++ ++G G+YG V+K R+ A+K+ + + E+ S K QH
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 63 IVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
VRL+ LYL E L++H ++ + + + +L L +A+ HS
Sbjct: 119 CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQ-VWGYLRDTLLALAHLHSQG 177
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
++H D+KP N+ + R KL DFGL G
Sbjct: 178 LVHLDVKPANIFLGPRGRC-KLGDFGLLVELGT--------------------------- 209
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
AG+ +Q Y APE+L GS Y T DV+S+G E+
Sbjct: 210 AGAGEVQ---EGDPRYMAPELLQGS--YGTAADVFSLGLTILEVA 249
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 43/252 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
+ YE V+ IG G +G V R+ T + A+K + + E + E ++
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 61 GNIVRLQDVVHSEKKLYLVFEYL---DL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+V+L ++ LY+V EY+ DL +L + D +A + + +++ +
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA------RFYTAEVVLALD 187
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
HS +HRD+KP N+L+D ++ LKLADFG
Sbjct: 188 AIHSMGFIHRDVKPDNMLLD-KSGHLKLADFGTC-------------------------- 220
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILL---GSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
++ ++ V T Y +PE+L G +Y D WSVG EM+ F
Sbjct: 221 --MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
Query: 234 PGDSEIDELFKI 245
DS + KI
Sbjct: 279 YADSLVGTYSKI 290
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ A+ V +E I+ E + + E S++KE ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 65 RLQDVVHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + ++ E + DLK ++ S P+ N+P L L ++++ G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++++ +HRDL +N + +K+ DFG+ R
Sbjct: 139 AYLNANKFVHRDLAARNCXV-AEDFTVKIGDFGMTR 173
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 43/252 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
+ YE V+ IG G +G V R+ T + A+K + + E + E ++
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 61 GNIVRLQDVVHSEKKLYLVFEYL---DL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+V+L ++ LY+V EY+ DL +L + D +A + + +++ +
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA------RFYTAEVVLALD 187
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
HS +HRD+KP N+L+D ++ LKLADFG
Sbjct: 188 AIHSMGFIHRDVKPDNMLLD-KSGHLKLADFGTC-------------------------- 220
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILL---GSRHYSTPVDVWSVGCIFAEMVNQRPLF 233
++ ++ V T Y +PE+L G +Y D WSVG EM+ F
Sbjct: 221 --MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
Query: 234 PGDSEIDELFKI 245
DS + KI
Sbjct: 279 YADSLVGTYSKI 290
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 36/224 (16%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
V++IG G +G+V+ + + +A+K I+ E I E ++ ++ H +V+L
Sbjct: 32 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 67 QDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
V + + LVFE+++ L ++ + L+ L + G+AY V+H
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIH 146
Query: 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGS 185
RDL +N L+ +K++DFG+ R ++ STG
Sbjct: 147 RDLAARNCLVGE-NQVIKVSDFGMTRF------VLDDQYTSSTGT--------------- 184
Query: 186 LILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
K W +PE+ SR YS+ DVWS G + E+ ++
Sbjct: 185 ------KFPVKW-ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSE 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 142/340 (41%), Gaps = 68/340 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
+D + +E IG G YG VYK + +A+K + I + L M+H
Sbjct: 12 LDNLKLLELIGRGRYGAVYKG--SLDERPVAVKVFSFANRQNFINEKNIYRVPL---MEH 66
Query: 61 GNIVRLQDVVHSEK-------KLYLVFEYL-DLDLKKHMD-SCPDFANDPRLIKTFLYQI 111
NI R +V E+ + LV EY + L K++ D+ + RL + +
Sbjct: 67 DNIARF--IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLA----HSV 120
Query: 112 LRGIAYCHSH---------RVLHRDLKPQNLLIDRRTNALKLADFGLA-RAFGIPVRTFT 161
RG+AY H+ + HRDL +N+L+ + ++DFGL+ R G R
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV-KNDGTCVISDFGLSMRLTG--NRLVR 177
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYS------TPVD 215
+ IS +V T+ Y APE+L G+ + VD
Sbjct: 178 PGEEDNAAIS--------------------EVGTIRYMAPEVLEGAVNLRDXESALKQVD 217
Query: 216 VWSVGCIFAEM-VNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWP 274
++++G I+ E+ + LFPG+S + E F+ N T+ + L + PK+P
Sbjct: 218 MYALGLIYWEIFMRCTDLFPGES-VPEYQMAFQT-EVGNHPTFEDMQVLVSREKQRPKFP 275
Query: 275 S--KELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALE 312
KE VR+L+ D + D R+TA+ A E
Sbjct: 276 EAWKENSLAVRSLKETIEDCWDQ----DAEARLTAQXAEE 311
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 163 LSDMGFVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTMR 446
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + F+ D + + YQ+ +A
Sbjct: 447 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ T+ +KL DFGL+R S Y
Sbjct: 506 YLESKRFVHRDIAARNVLVS-ATDCVKLGDFGLSRYM---------------EDSTY--- 546
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 547 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 596 VKNNDVIGRI 605
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALK-KIRLEQEDEGVPSTA--IREISLLKEMQ 59
+ ++V+ +G G +G VYK ET+ + I++ E G + + E ++ M
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILRG 114
H ++VRL V S + LV + + + +H D+ +L+ + QI +G
Sbjct: 99 HPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNI-----GSQLLLNWCVQIAKG 152
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+ Y R++HRDL +N+L+ + N +K+ DFGLAR
Sbjct: 153 MMYLEERRLVHRDLAARNVLV-KSPNHVKITDFGLAR 188
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 54/239 (22%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 133
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEHWGSTGISIYFSF 176
+HRDL +N+LI+ K++DFGL+R P +T
Sbjct: 134 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTR------------- 179
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 180 ------GGKIPIR--------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 163 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 47/258 (18%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIVR 65
+K+G G +G V+ A + +A+K ++ G S + E +++K +QH +V+
Sbjct: 194 KKLGAGQFGEVWMA-TYNKHTKVAVKTMK-----PGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 66 LQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
L VV E +Y++ E++ LD K + P+LI F QI G+A+
Sbjct: 248 LHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPL--PKLID-FSAQIAEGMAFIEQR 303
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRV 181
+HRDL+ N+L+ + K+ADFGLAR +E+ G
Sbjct: 304 NYIHRDLRAANILVS-ASLVCKIADFGLARVIE------DNEYTAREGA----------- 345
Query: 182 LAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN-QRPLFPGDSEID 240
K W I GS ++ DVWS G + E+V R +PG S +
Sbjct: 346 ----------KFPIKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 393
Query: 241 ELFKIFRVLGTPNEDTWP 258
+ + R P + P
Sbjct: 394 VIRALERGYRMPRPENCP 411
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 54/239 (22%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 150
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEHWGSTGISIYFSF 176
+HRDL +N+LI+ K++DFGL+R P +T
Sbjct: 151 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTR------------- 196
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 197 ------GGKIPIR--------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 240
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 69/323 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVP-STAIREISLLKEMQHGNIVRLQD 68
+G G +G V+ + T + A KK+ ++ + A+ E +L ++ IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHM----DSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
++ L LV ++ D++ H+ + P F +PR I + QI+ G+ + H +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAI-FYTAQIVSGLEHLHQRNI 310
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
++RDLKP+N+L+D N ++++D GLA +T T + G+ G
Sbjct: 311 IYRDLKPENVLLDDDGN-VRISDLGLAVELKAG-QTKTKGYAGTPG-------------- 354
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
+ APE+LLG Y VD +++G EM+ R F E E
Sbjct: 355 --------------FMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 244 KIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSR 303
++ + + PD PA D +L DP +
Sbjct: 400 EL-------KQRVLEQAVTYPD------------------KFSPASKDFCEALLQKDPEK 434
Query: 304 RITARSAL-----EHEYFRDVEF 321
R+ R H FRD+ +
Sbjct: 435 RLGFRDGSCDGLRTHPLFRDISW 457
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALK-KIRLEQEDEGVPSTA--IREISLLKEMQ 59
+ ++V+ +G G +G VYK ET+ + I++ E G + + E ++ M
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILRG 114
H ++VRL V S + LV + + + +H D+ +L+ + QI +G
Sbjct: 76 HPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNI-----GSQLLLNWCVQIAKG 129
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+ Y R++HRDL +N+L+ + N +K+ DFGLAR
Sbjct: 130 MMYLEERRLVHRDLAARNVLV-KSPNHVKITDFGLAR 165
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 163 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 163 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 69/323 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVP-STAIREISLLKEMQHGNIVRLQD 68
+G G +G V+ + T + A KK+ ++ + A+ E +L ++ IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHM----DSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
++ L LV ++ D++ H+ + P F +PR I + QI+ G+ + H +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAI-FYTAQIVSGLEHLHQRNI 310
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
++RDLKP+N+L+D N ++++D GLA +T T + G+ G
Sbjct: 311 IYRDLKPENVLLDDDGN-VRISDLGLAVELKAG-QTKTKGYAGTPG-------------- 354
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
+ APE+LLG Y VD +++G EM+ R F E E
Sbjct: 355 --------------FMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 244 KIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSR 303
++ + + PD PA D +L DP +
Sbjct: 400 EL-------KQRVLEQAVTYPD------------------KFSPASKDFCEALLQKDPEK 434
Query: 304 RITARSAL-----EHEYFRDVEF 321
R+ R H FRD+ +
Sbjct: 435 RLGFRDGSCDGLRTHPLFRDISW 457
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
+IG G++ VYK + T +A +++ + + E LK +QH NIVR D
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 69 ----VVHSEKKLYLVFE-YLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR- 122
V +K + LV E LK ++ ++++++ QIL+G+ + H+
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFK--VXKIKVLRSWCRQILKGLQFLHTRTP 150
Query: 123 -VLHRDLKPQNLLIDRRTNALKLADFGLA 150
++HRDLK N+ I T ++K+ D GLA
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 69/323 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVP-STAIREISLLKEMQHGNIVRLQD 68
+G G +G V+ + T + A KK+ ++ + A+ E +L ++ IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHM----DSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
++ L LV ++ D++ H+ + P F +PR I + QI+ G+ + H +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAI-FYTAQIVSGLEHLHQRNI 310
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
++RDLKP+N+L+D N ++++D GLA +T T + G+ G
Sbjct: 311 IYRDLKPENVLLDDDGN-VRISDLGLAVELKAG-QTKTKGYAGTPG-------------- 354
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
+ APE+LLG Y VD +++G EM+ R F E E
Sbjct: 355 --------------FMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 244 KIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSR 303
++ + + PD PA D +L DP +
Sbjct: 400 EL-------KQRVLEQAVTYPD------------------KFSPASKDFCEALLQKDPEK 434
Query: 304 RITARSAL-----EHEYFRDVEF 321
R+ R H FRD+ +
Sbjct: 435 RLGFRDGSCDGLRTHPLFRDISW 457
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 160
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 161 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 201
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 202 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 250
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 69/323 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVP-STAIREISLLKEMQHGNIVRLQD 68
+G G +G V+ + T + A KK+ ++ + A+ E +L ++ IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 69 VVHSEKKLYLVFEYLDL-DLKKHM----DSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
++ L LV ++ D++ H+ + P F +PR I + QI+ G+ + H +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAI-FYTAQIVSGLEHLHQRNI 310
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
++RDLKP+N+L+D N ++++D GLA +T T + G+ G
Sbjct: 311 IYRDLKPENVLLDDDGN-VRISDLGLAVELKAG-QTKTKGYAGTPG-------------- 354
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
+ APE+LLG Y VD +++G EM+ R F E E
Sbjct: 355 --------------FMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 244 KIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSR 303
++ + + PD PA D +L DP +
Sbjct: 400 EL-------KQRVLEQAVTYPD------------------KFSPASKDFCEALLQKDPEK 434
Query: 304 RITARSAL-----EHEYFRDVEF 321
R+ R H FRD+ +
Sbjct: 435 RLGFRDGSCDGLRTHPLFRDISW 457
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 163 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL R
Sbjct: 163 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 36/237 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV-RL 66
+KIG G +G + +N TNE +A I+LE P + E K++ V ++
Sbjct: 10 KKIGCGNFGELRLGKNLYTNEYVA---IKLEPIKSRAPQLHL-EYRFYKQLSATEGVPQV 65
Query: 67 QDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
K +V E L L+ D C D + + Q++ + Y H+ +++R
Sbjct: 66 YYFGPXGKYNAMVLELLGPSLEDLFDLC-DRTFTLKTVLMIAIQLITRMEYVHTKSLIYR 124
Query: 127 DLKPQNLLIDR----RTNALKLADFGLARAFGIPVRTFTH----EHWGSTGISIYFSF-- 176
D+KP+N L+ R R +A+ + DFGLA+ + I T H EH TG + Y S
Sbjct: 125 DVKPENFLVGRPGTKRQHAIHIIDFGLAKEY-IDPETKKHIPYREHKSLTGTARYMSINT 183
Query: 177 -----------------LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDV 216
+ L GSL Q LK TL R +I G +TP++V
Sbjct: 184 HLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI--GDTKRATPIEV 238
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 44/247 (17%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLE--QEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
IG G+Y V R T+ A++ ++ E +DE + + + H +V L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 68 DVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
+E +L+ V EY++ DL HM + + + +I + Y H +++R
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH--ARFYSAEISLALNYLHERGIIYR 177
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+L+D + +KL D+G+ + P T T G+
Sbjct: 178 DLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDT-TSTFCGTPN----------------- 218
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLF--------PGDSE 238
Y APEIL G Y VD W++G + EM+ R F P +
Sbjct: 219 -----------YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 266
Query: 239 IDELFKI 245
D LF++
Sbjct: 267 EDYLFQV 273
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 98/238 (41%), Gaps = 37/238 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
+KIG G +G + +N TNE +A I+LE P + E K++ Q
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVA---IKLEPIKSRAPQLHL-EYRFYKQLGSAGEGLPQ 61
Query: 68 DVVHSEKKLY--LVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
Y +V E L L+ D C D + + Q+L + Y HS +++
Sbjct: 62 VYYFGPXGKYNAMVLELLGPSLEDLFDLC-DRTFTLKTVLMIAIQLLSRMEYVHSKNLIY 120
Query: 126 RDLKPQNLLIDRRTN----ALKLADFGLARAFGIPVRTFTH----EHWGSTGISIYFSF- 176
RD+KP+N LI R+ N + + DFGLA+ + I T H EH TG + Y S
Sbjct: 121 RDVKPENFLIGRQGNKKEHVIHIIDFGLAKEY-IDPETKKHIPYREHKSLTGTARYMSIN 179
Query: 177 ------------------LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDV 216
+ L GSL Q LK TL R +I G +TP++
Sbjct: 180 THLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI--GDTKRNTPIEA 235
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62
+Y + K+G G + V+ + +A+K ++ Q TA+ EI LLK ++ +
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQH---YTETALDEIKLLKCVRESD 88
Query: 63 --------IVRLQDVVH----SEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQ 110
+V+L D + + +VFE L L K + R +K+ + Q
Sbjct: 89 PSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQ 148
Query: 111 ILRGIAYCHSH-RVLHRDLKPQNLLID------RR--TNALKLADFGLARAFGIPVRTFT 161
+L+G+ Y HS +++H D+KP+N+L+ RR A + G G V T
Sbjct: 149 VLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAP 208
Query: 162 HEHW--------GSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTP 213
+ I + + L + + T YR+ E+L+G+ YSTP
Sbjct: 209 AADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTE--DIQTRQYRSIEVLIGAG-YSTP 265
Query: 214 VDVWSVGCIFAEMVNQRPLFPGDS------EIDELFKIFRVLGT 251
D+WS C+ E+ LF S + D + I +LG+
Sbjct: 266 ADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D + +G G +G VYK R +A+K+++ E+ +G E+ ++ H
Sbjct: 30 DNFXNKNILGRGGFGKVYKGR-LADGXLVAVKRLK-EERTQGGELQFQTEVEMISMAVHR 87
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
N++RL+ + + LV+ Y+ L++ +S P + P+ + L RG+A
Sbjct: 88 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL-DWPKRQRIALGSA-RGLA 145
Query: 117 YCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
Y H H +++HRD+K N+L+D A+ + DFGLA+
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAK 182
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTMR 66
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + F+ D + + YQ+ +A
Sbjct: 67 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
Y S R +HRD+ +N+L+ + +KL DFGL+R
Sbjct: 126 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSR 159
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D + +G G +G VYK R +A+K+++ E+ +G E+ ++ H
Sbjct: 38 DNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLK-EERXQGGELQFQTEVEMISMAVHR 95
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
N++RL+ + + LV+ Y+ L++ +S P + P+ + L RG+A
Sbjct: 96 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL-DWPKRQRIALGSA-RGLA 153
Query: 117 YCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
Y H H +++HRD+K N+L+D A+ + DFGLA+
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAK 190
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D E + ++G G YGVV K R+ + + +A+K+IR + + ++ +
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCH 119
V + E +++ E +D L K D ++ I++ + + H
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 120 SH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
S V+HRD+KP N+LI+ +K+ DFG
Sbjct: 127 SKLSVIHRDVKPSNVLIN-ALGQVKMCDFG------------------------------ 155
Query: 179 YRVLAGSLILQFLKVVTLW---YRAPEIL---LGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
++G L+ K + Y APE + L + YS D+WS+G E+ R
Sbjct: 156 ---ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR-- 210
Query: 233 FPGDS 237
FP DS
Sbjct: 211 FPYDS 215
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 1 MDQYEKVEKI-GEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISL-LKEM 58
+D Y+ ++ G G G V + N T E ALK + + P A RE+ L +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 68
Query: 59 QHGNIVRLQDVVHS----EKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
Q +IVR+ DV + K L +V E LD +L + D A R + I
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 114 GIAYCHSHRVLHRDLKPQNLL-IDRRTNA-LKLADFGLARAFGIPVRTFTHEHWGSTGIS 171
I Y HS + HRD+KP+NLL +R NA LKL DFG A+ + + W S G+
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKSCDMW-SLGVI 187
Query: 172 IYFSFLRY 179
+Y Y
Sbjct: 188 MYILLCGY 195
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 55/244 (22%)
Query: 6 KVEK-IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
K+EK IG G +G V R V + +A+K ++ D+ + E S++ + H
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHP 90
Query: 62 NIVRLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
NI+ L+ VV K + ++ EY LD L+K ND R L +LRGI
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK---------NDGRFTVIQLVGMLRGIG 141
Query: 117 ----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEHWGSTGIS 171
Y +HRDL +N+L++ K++DFG++R P +T
Sbjct: 142 SGMKYLSDMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTR-------- 192
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--Q 229
G + ++ + APE + R +++ DVWS G + E+++ +
Sbjct: 193 -----------GGKIPIR--------WTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGE 232
Query: 230 RPLF 233
RP +
Sbjct: 233 RPYW 236
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 4 YEKVEK-IGEGTYGVVYKAR--------NCVTNETIALKKIRLEQEDEGVPSTAIREISL 54
Y K+E+ IG G +G V + R +CV +T+ ++ + + E S+
Sbjct: 17 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE------FLSEASI 70
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
+ + +H NI+RL+ VV + + ++ E+++ +DS ND + L +LRG
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFME---NGALDSFLRL-NDGQFTVIQLVGMLRG 126
Query: 115 IA----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
IA Y +HRDL +N+L++ K++DFGL+R F E+
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSR--------FLEENSSDP-- 175
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN-- 228
L G + ++ + APE + R +++ D WS G + E+++
Sbjct: 176 ------TETSSLGGKIPIR--------WTAPEA-IAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 229 QRP 231
+RP
Sbjct: 221 ERP 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 7 VEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
V++IG G +G+V+ + + +A+K IR EG S I E ++ ++ H +V
Sbjct: 13 VQEIGSGQFGLVHLGY-WLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 123
+L V + + LV E+++ L ++ + L+ L + G+AY V
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 125
Query: 124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
+HRDL +N L+ +K++DFG+ R ++ STG
Sbjct: 126 IHRDLAARNCLVGE-NQVIKVSDFGMTRF------VLDDQYTSSTGT------------- 165
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ 229
K W +PE+ SR YS+ DVWS G + E+ ++
Sbjct: 166 --------KFPVKW-ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSE 201
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 106/234 (45%), Gaps = 48/234 (20%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKK------IRLEQEDEGVPSTAIREISL 54
+ ++ + +G G++G V+ R+ A+K +RL+Q + E +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEH-----TNDERLM 59
Query: 55 LKEMQHGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILR 113
L + H I+R+ ++++++ +Y++ +L + F N + K + ++
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP--VAKFYAAEVCL 117
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
+ Y HS +++RDLKP+N+L+D+ + +K+ DFG A+ +P T+
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGH-IKITDFGFAKY--VPDVTYX------------ 162
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV 227
L G T Y APE+ + ++ Y+ +D WS G + EM+
Sbjct: 163 --------LCG----------TPDYIAPEV-VSTKPYNKSIDWWSFGILIYEML 197
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTMR 446
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + F+ D + + YQ+ +A
Sbjct: 447 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ + +KL DFGL+R S Y
Sbjct: 506 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYM---------------EDSTY--- 546
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 547 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 596 VKNNDVIGRI 605
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTMR 66
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + ++ D + + YQ+ +A
Sbjct: 67 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ + +KL DFGL+R S Y
Sbjct: 126 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYM---------------EDSTY--- 166
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 167 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 216 VKNNDVIGRI 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 11 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMR 69
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + ++ D + + YQ+ +A
Sbjct: 70 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ + +KL DFGL+R S Y
Sbjct: 129 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYM---------------EDSTY--- 169
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 170 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 218
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 219 VKNNDVIGRI 228
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMR 66
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + ++ D + + YQ+ +A
Sbjct: 67 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ + +KL DFGL+R S Y
Sbjct: 126 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYM---------------EDSTY--- 166
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 167 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 216 VKNNDVIGRI 225
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 55/244 (22%)
Query: 6 KVEK-IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
K+EK IG G +G V R V + +A+K ++ D+ + E S++ + H
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHP 69
Query: 62 NIVRLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
NI+ L+ VV K + ++ EY LD L+K ND R L +LRGI
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK---------NDGRFTVIQLVGMLRGIG 120
Query: 117 ----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEHWGSTGIS 171
Y +HRDL +N+L++ K++DFG++R P +T
Sbjct: 121 SGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTR-------- 171
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--Q 229
G + ++ + APE + R +++ DVWS G + E+++ +
Sbjct: 172 -----------GGKIPIR--------WTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGE 211
Query: 230 RPLF 233
RP +
Sbjct: 212 RPYW 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
+Q E E IG+G +G VY R + +A++ I +E+++E RE+ ++ +H
Sbjct: 33 EQLEIGELIGKGRFGQVYHGR---WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHE 89
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
N+V S L ++ + D + +I++G+ Y H+
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155
+LH+DLK +N+ D + + DFGL G+
Sbjct: 150 GILHKDLKSKNVFYD--NGKVVITDFGLFSISGV 181
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMR 71
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + ++ D + + YQ+ +A
Sbjct: 72 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ + +KL DFGL+R + + S Y
Sbjct: 131 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSR--------YMED-------STY--- 171
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 172 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 221 VKNNDVIGRI 230
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 36 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMR 94
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + ++ D + + YQ+ +A
Sbjct: 95 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ + +KL DFGL+R S Y
Sbjct: 154 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYM---------------EDSTY--- 194
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 195 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 244 VKNNDVIGRI 253
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 53/238 (22%)
Query: 10 IGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
IGEG +G V KAR + + + A+K+++ + A L K H NI+
Sbjct: 33 IGEGNFGQVLKAR--IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 66 LQDVVHSEKKLYLVFEY------LD-LDLKKHMDSCPDFANDPRLIKT--------FLYQ 110
L LYL EY LD L + +++ P FA T F
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
+ RG+ Y + +HRDL +N+L+ A K+ADFGL+R G
Sbjct: 151 VARGMDYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSR-----------------GQ 192
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
+Y + G L ++++ + +L Y Y+T DVWS G + E+V+
Sbjct: 193 EVYV-----KKTMGRLPVRWMAIESLNYSV---------YTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 53/238 (22%)
Query: 10 IGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
IGEG +G V KAR + + + A+K+++ + A L K H NI+
Sbjct: 23 IGEGNFGQVLKAR--IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 66 LQDVVHSEKKLYLVFEY------LD-LDLKKHMDSCPDFANDPRLIKT--------FLYQ 110
L LYL EY LD L + +++ P FA T F
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
+ RG+ Y + +HRDL +N+L+ A K+ADFGL+R G
Sbjct: 141 VARGMDYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSR-----------------GQ 182
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
+Y + G L ++++ + +L Y Y+T DVWS G + E+V+
Sbjct: 183 EVYV-----KKTMGRLPVRWMAIESLNYSV---------YTTNSDVWSYGVLLWEIVS 226
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 10 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMR 68
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + ++ D + + YQ+ +A
Sbjct: 69 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ + +KL DFGL+R S Y
Sbjct: 128 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYM---------------EDSTY--- 168
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 169 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 217
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 218 VKNNDVIGRI 227
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 61/260 (23%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIVR 65
+K+G G +G V+ A + +A+K ++ G S + E +++K +QH +V+
Sbjct: 188 KKLGAGQFGEVWMA-TYNKHTKVAVKTMK-----PGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 66 LQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
L VV E +Y++ E++ LD K + P+LI F QI G+A+
Sbjct: 242 LHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPL--PKLID-FSAQIAEGMAFIEQR 297
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFG-IPVRTFTHEHWGSTGISIYFSFLRYR 180
+HRDL+ N+L+ + K+ADFGLAR P++
Sbjct: 298 NYIHRDLRAANILVS-ASLVCKIADFGLARVGAKFPIK---------------------- 334
Query: 181 VLAGSLILQFLKVVTLWYRAPE-ILLGSRHYSTPVDVWSVGCIFAEMVN-QRPLFPGDSE 238
+ APE I GS ++ DVWS G + E+V R +PG S
Sbjct: 335 -----------------WTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
Query: 239 IDELFKIFRVLGTPNEDTWP 258
+ + + R P + P
Sbjct: 376 PEVIRALERGYRMPRPENCP 395
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 55/244 (22%)
Query: 6 KVEK-IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
K+EK IG G +G V R V + +A+K ++ D+ + E S++ + H
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHP 75
Query: 62 NIVRLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
NI+ L+ VV K + ++ EY LD L+K ND R L +LRGI
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK---------NDGRFTVIQLVGMLRGIG 126
Query: 117 ----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEHWGSTGIS 171
Y +HRDL +N+L++ K++DFG++R P +T
Sbjct: 127 SGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTR-------- 177
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--Q 229
G + ++ + APE + R +++ DVWS G + E+++ +
Sbjct: 178 -----------GGKIPIR--------WTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGE 217
Query: 230 RPLF 233
RP +
Sbjct: 218 RPYW 221
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 3 QYEKVE---KIGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLK 56
Q E++E IGEG +G V++ +A+K + D V ++E ++
Sbjct: 5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMR 63
Query: 57 EMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
+ H +IV+L V+ +E ++++ E L + ++ D + + YQ+ +A
Sbjct: 64 QFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSF 176
Y S R +HRD+ +N+L+ + +KL DFGL+R S Y
Sbjct: 123 YLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYM---------------EDSTY--- 163
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVG-CIFAEMVNQRPLFPG 235
Y+ G L ++++ APE + R +++ DVW G C++ +++ F G
Sbjct: 164 --YKASKGKLPIKWM--------APES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212
Query: 236 DSEIDELFKI 245
D + +I
Sbjct: 213 VKNNDVIGRI 222
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y KIG G++G +Y N + E +A I+LE P I E K MQ G
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVA---IKLECVKTKHPQLHI-ESKFYKMMQGG 64
Query: 62 -NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCP-DFANDPRLIKTFLY---QILRGIA 116
I ++ +V E L L+ + C F+ +KT L Q++ I
Sbjct: 65 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFS-----LKTVLLLADQMISRIE 119
Query: 117 YCHSHRVLHRDLKPQNLL--IDRRTNALKLADFGLARAFGIPVRTFTH----EHWGSTGI 170
Y HS +HRD+KP N L + ++ N + + DFGLA+ + RT H E+ TG
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY-RDARTHQHIPYRENKNLTGT 178
Query: 171 SIYFSF----------------LRYRVL---AGSLILQFLKVVTLWYRAPEILLGSRHYS 211
+ Y S L Y ++ GSL Q LK T + I + S
Sbjct: 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI--SEKKMS 236
Query: 212 TPVDVWSVG 220
TP++V G
Sbjct: 237 TPIEVLCKG 245
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
IG G +G V R + + +A+K +++ E + E S++ + H NI+ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V EY LD LKK ND + L +LRGI+ Y
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKK---------NDGQFTVIQLVGMLRGISAGMKY 139
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 140 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 180
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + APE + R +++ DVWS G + E+V+ +RP +
Sbjct: 181 AYTTRGGKIPIR--------WTAPE-AIAFRKFTSASDVWSYGIVMWEVVSYGERPYW 229
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V E LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 163 LSDMGAVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 14/150 (9%)
Query: 10 IGEGTYGVVY------KARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI 63
IG+G +GVVY +A+N + +L +I Q+ E +RE L++ + H N+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF----LREGLLMRGLNHPNV 84
Query: 64 VRLQDVVHSEKKL-YLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSH 121
+ L ++ + L +++ Y+ DL + + S P + + +F Q+ RG+ Y
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+ +HRDL +N ++D + +K+ADFGLAR
Sbjct: 144 KFVHRDLAARNCMLD-ESFTVKVADFGLAR 172
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 54/239 (22%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V E LD L+KH D + L +LRGIA Y
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 133
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEHWGSTGISIYFSF 176
+HRDL +N+LI+ K++DFGL+R P +T
Sbjct: 134 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTR------------- 179
Query: 177 LRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 180 ------GGKIPIR--------WTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 52/238 (21%)
Query: 10 IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66
+G G +G V R + ++ ++A+K +++ E + E S++ + H NI+RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 67 QDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA----Y 117
+ VV K + +V E LD L+KH D + L +LRGIA Y
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKH---------DAQFTVIQLVGMLRGIASGMKY 162
Query: 118 CHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFL 177
+HRDL +N+LI+ K++DFGL+R
Sbjct: 163 LSDMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEA------------------ 203
Query: 178 RYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLF 233
Y G + ++ + +PE + R +++ DVWS G + E+++ +RP +
Sbjct: 204 AYTTRGGKIPIR--------WTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 53/238 (22%)
Query: 10 IGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVR 65
IGEG +G V KAR + + + A+K+++ + A L K H NI+
Sbjct: 30 IGEGNFGQVLKAR--IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 66 LQDVVHSEKKLYLVFEY------LD-LDLKKHMDSCPDFANDPRLIKT--------FLYQ 110
L LYL EY LD L + +++ P FA T F
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
+ RG+ Y + +HR+L +N+L+ A K+ADFGL+R G
Sbjct: 148 VARGMDYLSQKQFIHRNLAARNILVGENYVA-KIADFGLSR-----------------GQ 189
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
+Y + G L ++++ + +L Y Y+T DVWS G + E+V+
Sbjct: 190 EVYV-----KKTMGRLPVRWMAIESLNYSV---------YTTNSDVWSYGVLLWEIVS 233
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 49/235 (20%)
Query: 10 IGEGTYGVVYKARNCVTNET----IALKKIRLE-QEDEGVPSTAIREISLLKEMQHGNIV 64
IG G +G VYK ++ +A+K ++ E + V + E ++ + H NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQFSHHNII 109
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIA----YCH 119
RL+ V+ K + ++ EY++ L K + D L +LRGIA Y
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLRE-----KDGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEHWGSTGISIYFSFLR 178
+ +HRDL +N+L++ K++DFGL+R P T+T S G
Sbjct: 165 NMNYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEATYTT----SGG--------- 210
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMV--NQRP 231
K+ W APE + R +++ DVWS G + E++ +RP
Sbjct: 211 -------------KIPIRW-TAPEA-ISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 55/244 (22%)
Query: 6 KVEK-IGEGTYGVVYKARNCVTNE---TIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
K+E+ IG G +G V R + + +A+K +++ E + E S++ + H
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT-EKQRRDFLCEASIMGQFDHP 104
Query: 62 NIVRLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIA 116
N+V L+ VV K + +V E+ LD L+KH D + L +LRGIA
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH---------DGQFTVIQLVGMLRGIA 155
Query: 117 ----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEHWGSTGIS 171
Y +HRDL +N+L++ K++DFGL+R P +T +TG
Sbjct: 156 AGMRYLADMGYVHRDLAARNILVNSNL-VCKVSDFGLSRVIEDDPEAVYT-----TTGGK 209
Query: 172 IYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--Q 229
I + + APE + R +++ DVWS G + E+++ +
Sbjct: 210 I----------------------PVRWTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGE 246
Query: 230 RPLF 233
RP +
Sbjct: 247 RPYW 250
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
++ E + ++G GT G V+K R T IA+K++R E + +LK
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC 83
Query: 61 GNIVRLQDVVHSEKKLYLVFEYLDL---DLKKHMDS-CPDFANDPRLIKTFLYQILRGIA 116
IV+ + +++ E + LKK M P+ R++ I++ +
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPE-----RILGKMTVAIVKALY 138
Query: 117 YC-HSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 150
Y H V+HRD+KP N+L+D R +KL DFG++
Sbjct: 139 YLKEKHGVIHRDVKPSNILLDER-GQIKLCDFGIS 172
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 42/235 (17%)
Query: 7 VEKIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGN 62
+ ++G+G++G+VY+ AR+ + E ++ E + + E S++K +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 63 IVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSC-PDFANDPRLIKTFLYQILR------- 113
+VRL VV + +V E + DLK ++ S P+ N+P L ++++
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+AY ++ + +HRDL +N ++ +K+ DFG+ R IY
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTR-------------------DIY 181
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
+ + G L ++++ APE L ++T D+WS G + E+ +
Sbjct: 182 ETAYYRKGGKGLLPVRWM--------APESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 7 VEKIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGN 62
+ ++G+G++G+VY+ AR+ + E ++ E + + E S++K +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 63 IVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSC-PDFANDPRLIKTFLYQILR------- 113
+VRL VV + +V E + DLK ++ S P+ N+P L ++++
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
G+AY ++ + +HRDL +N ++ +K+ DFG+ R
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ AR+ + E ++ E + + E S++K ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 65 RLQDVVHSEKKLYLVFEYL-DLDLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + +V E + DLK ++ S P+ N+P L ++++ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++ + +HRDL +N ++ +K+ DFG+ R
Sbjct: 144 AYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTR 178
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ AR+ + E ++ E + + E S++K ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 65 RLQDVVHSEKKLYLVFEYL-DLDLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + +V E + DLK ++ S P+ N+P L ++++ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++ + +HRDL +N ++ +K+ DFG+ R
Sbjct: 144 AYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTR 178
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 102/247 (41%), Gaps = 58/247 (23%)
Query: 10 IGEGTYGVVYKA-----RNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
+GEG +G V KA + T+A+K ++ E + E ++LK++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFAN-------------DPRLIK- 105
+L + L L+ EY L++ P + D R +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 106 ----TFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161
+F +QI +G+ Y +++HRDL +N+L+ +K++DFGL+R
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSR---------- 198
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
+Y + G + ++++ + +L+ Y+T DVWS G
Sbjct: 199 ---------DVYEEDSXVKRSQGRIPVKWMAIESLF---------DHIYTTQSDVWSFGV 240
Query: 222 IFAEMVN 228
+ E+V
Sbjct: 241 LLWEIVT 247
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 9 KIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGNIV 64
++G+G++G+VY+ AR+ + E ++ E + + E S++K ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 65 RLQDVVHSEKKLYLVFEYL-DLDLKKHMDSC-PDFANDPRLIKTFLYQILR-------GI 115
RL VV + +V E + DLK ++ S P+ N+P L ++++ G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
AY ++ + +HRDL +N ++ +K+ DFG+ R
Sbjct: 141 AYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTR 175
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 104/247 (42%), Gaps = 38/247 (15%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y KIG G++G +Y + E +A I+LE P I E + K MQ G
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVA---IKLECVKTKHPQLHI-ESKIYKMMQGG 64
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLY---QILRGIAYC 118
+ +E ++ L L ++ +F + +KT L Q++ I Y
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMEL---LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 121
Query: 119 HSHRVLHRDLKPQNLL--IDRRTNALKLADFGLARAFGIPVRTFTH----EHWGSTGISI 172
HS +HRD+KP N L + ++ N + + DFGLA+ + RT H E+ TG +
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR-DARTHQHIPYRENKNLTGTAR 180
Query: 173 YFSF----------------LRYRVL---AGSLILQFLKVVTLWYRAPEILLGSRHYSTP 213
Y S L Y ++ GSL Q LK T + I + STP
Sbjct: 181 YASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI--SEKKMSTP 238
Query: 214 VDVWSVG 220
++V G
Sbjct: 239 IEVLCKG 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 152
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 153 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEXXSVHNKTGA--------------- 196
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 197 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 7 VEKIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGN 62
+ ++G+G++G+VY+ AR+ + E ++ E + + E S++K +
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 63 IVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSC-PDFANDPRLIKTFLYQILR------- 113
+VRL VV + +V E + DLK ++ S P+ N+P L ++++
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
G+AY ++ + +HRDL +N ++ +K+ DFG+ R
Sbjct: 141 GMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTR 177
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 102/247 (41%), Gaps = 58/247 (23%)
Query: 10 IGEGTYGVVYKA-----RNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
+GEG +G V KA + T+A+K ++ E + E ++LK++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFAN-------------DPRLIK- 105
+L + L L+ EY L++ P + D R +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 106 ----TFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161
+F +QI +G+ Y +++HRDL +N+L+ +K++DFGL+R
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSR---------- 198
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
+Y + G + ++++ + +L+ Y+T DVWS G
Sbjct: 199 ---------DVYEEDSYVKRSQGRIPVKWMAIESLF---------DHIYTTQSDVWSFGV 240
Query: 222 IFAEMVN 228
+ E+V
Sbjct: 241 LLWEIVT 247
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 48/234 (20%)
Query: 9 KIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
++G G +G V Y+ R + I + K E+ D +RE ++ ++ + IV
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD---TEEMMREAQIMHQLDNPYIV 73
Query: 65 RLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
RL V +E L LV E L L + P +N + L+Q+ G+ Y
Sbjct: 74 RLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIP-VSN----VAELLHQVSMGMKYLE 127
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+HRDL +N+L+ R A K++DFGL++A G +T
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYA-KISDFGLSKALGADDSYYTARS--------------- 171
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRP 231
AG L+ WY APE + R +S+ DVWS G E ++ Q+P
Sbjct: 172 ---AGKWPLK-------WY-APEC-INFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 105/267 (39%), Gaps = 62/267 (23%)
Query: 10 IGEGTYGVVYKARNCVTNET-----IALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNI 63
+G G +G V A ++T +A+K ++ E+ D + E+ ++ ++ H NI
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLGSHENI 111
Query: 64 VRLQDVVHSEKKLYLVFEY---------LDLDLKKHMDSCPDFANDPRL----------- 103
V L +YL+FEY L +K + ++ N RL
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 104 --IKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161
+ F YQ+ +G+ + +HRDL +N+L+ +K+ DFGLAR
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-THGKVVKICDFGLARDI-------- 222
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
S Y V + ++ W APE L Y+ DVWS G
Sbjct: 223 ------------MSDSNYVVRGNA------RLPVKW-MAPESLF-EGIYTIKSDVWSYGI 262
Query: 222 ----IFAEMVNQRPLFPGDSEIDELFK 244
IF+ VN P P D+ +L +
Sbjct: 263 LLWEIFSLGVNPYPGIPVDANFYKLIQ 289
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 104/247 (42%), Gaps = 38/247 (15%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
++Y KIG G++G +Y + E +A I+LE P I E + K MQ G
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVA---IKLECVKTKHPQLHI-ESKIYKMMQGG 62
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLY---QILRGIAYC 118
+ +E ++ L L ++ +F + +KT L Q++ I Y
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMEL---LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 119
Query: 119 HSHRVLHRDLKPQNLL--IDRRTNALKLADFGLARAFGIPVRTFTH----EHWGSTGISI 172
HS +HRD+KP N L + ++ N + + DFGLA+ + RT H E+ TG +
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR-DARTHQHIPYRENKNLTGTAR 178
Query: 173 YFSF----------------LRYRVL---AGSLILQFLKVVTLWYRAPEILLGSRHYSTP 213
Y S L Y ++ GSL Q LK T + I + STP
Sbjct: 179 YASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI--SEKKMSTP 236
Query: 214 VDVWSVG 220
++V G
Sbjct: 237 IEVLCKG 243
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 49 IREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRL 103
+ E S++ + H NI+RL+ VV + +V EY LD L+ H D +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH---------DGQF 148
Query: 104 IKTFLYQILRGIA----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVR 158
L +LRG+ Y +HRDL +N+L+D K++DFGL+R P
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDA 207
Query: 159 TFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWS 218
+T +TG I + + APE + R +S+ DVWS
Sbjct: 208 AYT-----TTGGKI----------------------PIRWTAPEA-IAFRTFSSASDVWS 239
Query: 219 VGCIFAEMV--NQRPLFPGD-----SEIDELFKIFRVLGTPN 253
G + E++ +RP + S ++E +++ +G P+
Sbjct: 240 FGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH 281
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 42/228 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M + + ++ IG+G +G V +A+K I+ ++ + E S++ +++H
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCIK----NDATAQAFLAEASVMTQLRH 73
Query: 61 GNIVRLQDVVHSEK-KLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
N+V+L V+ EK LY+V EY+ L ++ S + F + + Y
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
+ +HRDL +N+L+ N K++DFGL + T
Sbjct: 134 EGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTKEASSTQDT------------------- 173
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
G L ++ + APE L + +ST DVWS G + E+
Sbjct: 174 -----GKLPVK--------WTAPEALR-EKKFSTKSDVWSFGILLWEI 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 145
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 146 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 189
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 190 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 237
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 42/228 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M + + ++ IG+G +G V +A+K I+ ++ + E S++ +++H
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCIK----NDATAQAFLAEASVMTQLRH 58
Query: 61 GNIVRLQDVVHSEK-KLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
N+V+L V+ EK LY+V EY+ L ++ S + F + + Y
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
+ +HRDL +N+L+ N K++DFGL + T
Sbjct: 119 EGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTKEASSTQDT------------------- 158
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
G L ++ + APE L + +ST DVWS G + E+
Sbjct: 159 -----GKLPVK--------WTAPEALR-EKKFSTKSDVWSFGILLWEI 192
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 172
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 173 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 216
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ-RPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E++ + P +P + D
Sbjct: 217 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 264
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 171
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 172 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 215
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 216 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 263
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 153
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 154 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 197
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 198 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 58/247 (23%)
Query: 10 IGEGTYGVVYKA-----RNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
+GEG +G V KA + T+A+K ++ E + E ++LK++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 65 RLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFAN-------------DPRLIK- 105
+L + L L+ EY L++ P + D R +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 106 ----TFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161
+F +QI +G+ Y ++HRDL +N+L+ +K++DFGL+R
Sbjct: 150 GDLISFAWQISQGMQYLAEMSLVHRDLAARNILV-AEGRKMKISDFGLSR---------- 198
Query: 162 HEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGC 221
+Y + G + ++++ + +L+ Y+T DVWS G
Sbjct: 199 ---------DVYEEDSXVKRSQGRIPVKWMAIESLF---------DHIYTTQSDVWSFGV 240
Query: 222 IFAEMVN 228
+ E+V
Sbjct: 241 LLWEIVT 247
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 148
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 149 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 192
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 193 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 240
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 150
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 151 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 194
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 195 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 242
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 42/228 (18%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M + + ++ IG+G +G V +A+K I+ ++ + E S++ +++H
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCIK----NDATAQAFLAEASVMTQLRH 245
Query: 61 GNIVRLQDVVHSEK-KLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
N+V+L V+ EK LY+V EY+ L ++ S + F + + Y
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
+ +HRDL +N+L+ N K++DFGL + T
Sbjct: 306 EGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTKEASSTQDT------------------- 345
Query: 179 YRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 226
G L ++ + APE L + +ST DVWS G + E+
Sbjct: 346 -----GKLPVK--------WTAPEALR-EKKFSTKSDVWSFGILLWEI 379
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 151
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 152 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 195
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 196 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 94/244 (38%), Gaps = 43/244 (17%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL-EQEDEGVPSTAIREISLLKEMQHG 61
Y ++K+GEG + V ALK+I EQ+D A RE + + H
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR---EEAQREADMHRLFNHP 86
Query: 62 NIVRLQDVVHSEK----KLYLVFEYLDLD-LKKHMDSCPDFAN--DPRLIKTFLYQILRG 114
NI+RL E+ + +L+ + L ++ D N I L I RG
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV----RTFTHEHWGSTGI 170
+ H+ HRDLKP N+L+ + L D G I V + T + W +
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALTLQDWAA--- 202
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRH--YSTPVDVWSVGCI-FAEMV 227
+ T+ YRAPE+ H DVWS+GC+ +A M
Sbjct: 203 ---------------------QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF 241
Query: 228 NQRP 231
+ P
Sbjct: 242 GEGP 245
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 152
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 153 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 196
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 197 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 99/256 (38%), Gaps = 46/256 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQH 60
D +E ++ IG G + V + T + A+K + + + G S E +L
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 61 GNIVRLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
I +L E LYLV EY L L K + P + + +L +I+ I
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIP-----AEMARFYLAEIVMAI 175
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H +HRD+KP N+L+D R ++LADFG S
Sbjct: 176 DSVHRLGYVHRDIKPDNILLD-RCGHIRLADFG--------------------------S 208
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILLG------SRHYSTPVDVWSVGCIFAEMVNQ 229
L+ R A + + V T Y +PEIL + Y D W++G EM
Sbjct: 209 CLKLR--ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266
Query: 230 RPLFPGDSEIDELFKI 245
+ F DS + KI
Sbjct: 267 QTPFYADSTAETYGKI 282
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ Y S +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKK 153
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 154 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGA--------------- 197
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 198 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 1 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
M + + ++ IG+G +G V +A+K I+ ++ + E S++ +++H
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCIK----NDATAQAFLAEASVMTQLRH 64
Query: 61 GNIVRLQDVVHSEK-KLYLVFEYL-DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
N+V+L V+ EK LY+V EY+ L ++ S + F + + Y
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
+ +HRDL +N+L+ N K++DFGL +
Sbjct: 125 EGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTK 156
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 7 VEKIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGN 62
+ ++G+G++G+VY+ AR+ + E ++ E + + E S++K +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 63 IVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSC-PDFANDPRLIKTFLYQILR------- 113
+VRL VV + +V E + DLK ++ S P+ N+P L ++++
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
G+AY ++ + +HR+L +N ++ +K+ DFG+ R
Sbjct: 142 GMAYLNAKKFVHRNLAARNCMVAHDF-TVKIGDFGMTR 178
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 7 VEKIGEGTYGVVYK--ARNCVTNETIALKKIRLEQEDEGVPSTA--IREISLLKEMQHGN 62
+ ++G+G++G+VY+ AR+ + E ++ E + + E S++K +
Sbjct: 23 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 82
Query: 63 IVRLQDVVHSEKKLYLVFEYL-DLDLKKHMDSC-PDFANDPRLIKTFLYQILR------- 113
+VRL VV + +V E + DLK ++ S P+ N+P L ++++
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151
G+AY ++ + +HR+L +N ++ +K+ DFG+ R
Sbjct: 143 GMAYLNAKKFVHRNLAARNCMVAHDF-TVKIGDFGMTR 179
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 78
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 79 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 132
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 181
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 182 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 218
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKK-IRLEQEDEGVPS-TAIREISL-LKEMQ 59
+ K++ +G G +G V+K E+I + I++ ++ G S A+ + L + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYC 118
H +IVRL + L LV +YL L L H+ A P+L+ + QI +G+ Y
Sbjct: 74 HAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYL 131
Query: 119 HSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 150
H ++HR+L +N+L+ + + +++ADFG+A
Sbjct: 132 EEHGMVHRNLAARNVLL-KSPSQVQVADFGVA 162
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 124/319 (38%), Gaps = 69/319 (21%)
Query: 9 KIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
+IG G YG V K + + + +A+K+IR +++ + +++ IV+
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 69 VVHSEKKLYLVFEYLDLDLKK---HMDSCPDFANDPRLIKTFLYQILRGIAYCHSH-RVL 124
+ E ++ E + K ++ S D ++ ++ + + + +++
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKII 148
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRD+KP N+L+DR N +KL DFG ++G
Sbjct: 149 HRDIKPSNILLDRSGN-IKLCDFG---------------------------------ISG 174
Query: 185 SLILQFLKVVTLW---YRAPEILLGS---RHYSTPVDVWSVGCIFAEMVNQRPLFPG-DS 237
L+ K Y APE + S + Y DVWS+G E+ R +P +S
Sbjct: 175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS 234
Query: 238 EIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKML 297
D+L ++ V G P P+ + E R P+ I+ ++ L
Sbjct: 235 VFDQLTQV--VKGDP------------------PQLSNSE----EREFSPSFINFVNLCL 270
Query: 298 CMDPSRRITARSALEHEYF 316
D S+R + L+H +
Sbjct: 271 TKDESKRPKYKELLKHPFI 289
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 75
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 76 DNPHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNI-----GSQYLLNWCVQIAK 129
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 178
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 179 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 77
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 78 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 131
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 180
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 181 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 217
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 58/216 (26%)
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDL--DLKKHMDSCPDFANDPRLIK---TFLYQIL 112
++ G RL V SE F+ D+++ DS F +P ++ ++ +Q+
Sbjct: 151 LEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDS-DGFYKEPITMEDLISYSFQVA 209
Query: 113 RGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISI 172
RG+ + S + +HRDL +N+L+ N +K+ DFGLAR I
Sbjct: 210 RGMEFLSSRKCIHRDLAARNILLS-ENNVVKICDFGLAR-------------------DI 249
Query: 173 YFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
Y + R L L+++ APE + + YST DVWS G +
Sbjct: 250 YKNPDYVRKGDTRLPLKWM--------APESIF-DKIYSTKSDVWSYGVL---------- 290
Query: 233 FPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS 268
L++IF + G+P +PGV DF S
Sbjct: 291 ---------LWEIFSLGGSP----YPGVQMDEDFCS 313
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 74
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 75 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 128
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 177
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 178 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 214
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 15/156 (9%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKK-IRLEQEDEGVPS-TAIREISL-LKEMQ 59
+ K++ +G G +G V+K E+I + I++ ++ G S A+ + L + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILRG 114
H +IVRL + L LV +YL L +++H A P+L+ + QI +G
Sbjct: 92 HAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRG-----ALGPQLLLNWGVQIAKG 145
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 150
+ Y H ++HR+L +N+L+ + + +++ADFG+A
Sbjct: 146 MYYLEEHGMVHRNLAARNVLL-KSPSQVQVADFGVA 180
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 75
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 76 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 129
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 178
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 179 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 76
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 77 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 130
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 179
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 180 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 216
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 19 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 76 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 133
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA W + ++ L+GS+
Sbjct: 134 DLKSNNIFLHEDL-TVKIGDFGLAT---------VKSRWSGSH--------QFEQLSGSI 175
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 176 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 228 GRGYLSPD 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 16 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 73 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 130
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA W + ++ L+GS+
Sbjct: 131 DLKSNNIFLHEDL-TVKIGDFGLAT---------VKSRWSGSH--------QFEQLSGSI 172
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 173 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 225 GRGYLSPD 232
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL---EQEDEGVPSTA--IREISLLKE 57
+YEK +IG+G +G+V+K R +A+K + L E E E + RE+ ++
Sbjct: 22 EYEK--QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
+ H NIV+L ++H+ ++ + F + +D +L + I GI Y
Sbjct: 80 LNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL--RLMLDIALGIEY 137
Query: 118 CHSHR--VLHRDLKPQNLLIDR-RTNA---LKLADFGLAR 151
+ ++HRDL+ N+ + NA K+ADFGL++
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 14 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 71 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 128
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA W + ++ L+GS+
Sbjct: 129 DLKSNNIFLHEDL-TVKIGDFGLAT---------VKSRWSGSH--------QFEQLSGSI 170
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 171 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 223 GRGYLSPD 230
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 19 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 76 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 133
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA W + ++ L+GS+
Sbjct: 134 DLKSNNIFLHEDL-TVKIGDFGLAT---------VKSRWSGSH--------QFEQLSGSI 175
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 176 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 228 GRGYLSPD 235
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 92/245 (37%), Gaps = 45/245 (18%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61
D E + ++G G YGVV K R+ + + A+K+IR + + +
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 62 NIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFAND--PRLIKTFLYQILRGIAYCH 119
V + E +++ E D L K D ++ I++ + + H
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 120 SH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLR 178
S V+HRD+KP N+LI+ +K DFG
Sbjct: 154 SKLSVIHRDVKPSNVLIN-ALGQVKXCDFG------------------------------ 182
Query: 179 YRVLAGSLILQFLKVVTLW---YRAPEIL---LGSRHYSTPVDVWSVGCIFAEMVNQRPL 232
++G L+ K + Y APE + L + YS D+WS+G E+ R
Sbjct: 183 ---ISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR-- 237
Query: 233 FPGDS 237
FP DS
Sbjct: 238 FPYDS 242
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 42 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 99 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 156
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA T S + ++ L+GS+
Sbjct: 157 DLKSNNIFLHEDL-TVKIGDFGLA-----------------TEKSRWSGSHQFEQLSGSI 198
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 199 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 251 GRGYLSPD 258
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 14 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 71 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 128
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA T S + ++ L+GS+
Sbjct: 129 DLKSNNIFLHEDL-TVKIGDFGLA-----------------TEKSRWSGSHQFEQLSGSI 170
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 171 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 223 GRGYLSPD 230
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 34 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 91 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 148
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA T S + ++ L+GS+
Sbjct: 149 DLKSNNIFLHEDL-TVKIGDFGLA-----------------TEKSRWSGSHQFEQLSGSI 190
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 191 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 243 GRGYLSPD 250
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 48/234 (20%)
Query: 9 KIGEGTYGVV----YKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
++G G +G V Y+ R + I + K E+ D +RE ++ ++ + IV
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT---EEMMREAQIMHQLDNPYIV 399
Query: 65 RLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 119
RL V +E L LV E L L + P +N + L+Q+ G+ Y
Sbjct: 400 RLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIP-VSN----VAELLHQVSMGMKYLE 453
Query: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRY 179
+HR+L +N+L+ R A K++DFGL++A G +T G +
Sbjct: 454 EKNFVHRNLAARNVLLVNRHYA-KISDFGLSKALGADDSYYTARSAGKWPLK-------- 504
Query: 180 RVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRP 231
WY APE + R +S+ DVWS G E ++ Q+P
Sbjct: 505 -----------------WY-APEC-INFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 42 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 99 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 156
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA W + ++ L+GS+
Sbjct: 157 DLKSNNIFLHEDL-TVKIGDFGLAT---------VKSRWSGSH--------QFEQLSGSI 198
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 199 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 251 GRGYLSPD 258
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 55/222 (24%)
Query: 49 IREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRL 103
+ E S++ + H NI+RL+ VV + +V EY LD L+ H D +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH---------DGQF 148
Query: 104 IKTFLYQILRGIA----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVR 158
L +LRG+ Y +HRDL +N+L+D K++DFGL+R P
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDA 207
Query: 159 TFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWS 218
T +TG I + + APE + R +S+ DVWS
Sbjct: 208 AXT-----TTGGKI----------------------PIRWTAPEA-IAFRTFSSASDVWS 239
Query: 219 VGCIFAEMV--NQRPLFPGD-----SEIDELFKIFRVLGTPN 253
G + E++ +RP + S ++E +++ +G P+
Sbjct: 240 FGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH 281
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 36/189 (19%)
Query: 49 IREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFL 108
+ E S++ + H N++ L+ VV + ++ E+++ +DS ND + L
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME---NGSLDSFLR-QNDGQFTVIQL 137
Query: 109 YQILRGIA----YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEH 164
+LRGIA Y +HRDL +N+L++ K++DFGL+R F +
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL-VCKVSDFGLSR--------FLED- 187
Query: 165 WGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFA 224
T Y S L G + ++ + APE + R +++ DVWS G +
Sbjct: 188 --DTSDPTYTS-----ALGGKIPIR--------WTAPE-AIQYRKFTSASDVWSYGIVMW 231
Query: 225 EMVN--QRP 231
E+++ +RP
Sbjct: 232 EVMSYGERP 240
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 41 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
++ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 98 GY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 155
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA W + ++ L+GS+
Sbjct: 156 DLKSNNIFLHEDL-TVKIGDFGLAT---------VKSRWSGSH--------QFEQLSGSI 197
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 198 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 250 GRGYLSPD 257
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ + S +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKK 212
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 213 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGA--------------- 256
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 257 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 304
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ + S +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKK 153
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 154 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGA--------------- 197
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 198 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ + S +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKK 153
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 154 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGA--------------- 197
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 198 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ + S +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKK 154
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 155 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGA--------------- 198
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 199 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 99
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 100 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 153
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 202
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 203 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 239
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 74
Query: 59 QHGNIVRLQDVVHSEKKLYLV----FEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRG 114
+ ++ RL + + + F L +++H D+ + + + QI +G
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNI-----GSQYLLNWCVQIAKG 129
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 130 MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE----------- 177
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 178 --------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 80
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 81 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 134
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 183
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 184 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 220
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ + S +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKK 158
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 159 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGA--------------- 202
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 203 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 250
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 77
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 78 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 131
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 180
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 181 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 33/248 (13%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67
++IG G++G VYK + + +A+K + + E+ +L++ +H NI+
Sbjct: 14 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 68 DVVHSEKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHR 126
+ +L +V ++ + L H+ +LI Q +G+ Y H+ ++HR
Sbjct: 71 GY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID-IARQTAQGMDYLHAKSIIHR 128
Query: 127 DLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAGSL 186
DLK N+ + +K+ DFGLA W + ++ L+GS+
Sbjct: 129 DLKSNNIFLHEDL-TVKIGDFGLAT---------VKSRWSGSH--------QFEQLSGSI 170
Query: 187 ILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEIDELFKI 245
+ +V+ + + P YS DV++ G + E M Q P ++ +F +
Sbjct: 171 LWMAPEVIRMQDKNP--------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Query: 246 FRVLGTPN 253
R +P+
Sbjct: 223 GRGYLSPD 230
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ + S +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKK 151
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 152 FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGA--------------- 195
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 196 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 77
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 78 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 131
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 180
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 181 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 77
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 78 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 131
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 180
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 181 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 81
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 135
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 184
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 185 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 84
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 85 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 138
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 187
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 188 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 76
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 77 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 130
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 179
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 180 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 74
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 128
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 177
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 178 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 214
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 8 EKIGEGTYGVVYKAR---NCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIV 64
E IG G +G VY N A+K + D G S + E ++K+ H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 65 RLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHR 122
L + + SE +V Y+ DL+ + + LI F Q+ +G+ + S +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKK 154
Query: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVL 182
+HRDL +N ++D + +K+ADFGLAR H G+
Sbjct: 155 FVHRDLAARNCMLDEKF-TVKVADFGLARDMLDKEFDSVHNKTGA--------------- 198
Query: 183 AGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAE-MVNQRPLFPGDSEID 240
K+ W L ++ ++T DVWS G + E M P +P + D
Sbjct: 199 ---------KLPVKWMALES--LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 99/256 (38%), Gaps = 44/256 (17%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREI-SLLKEMQH 60
+ +E ++ IG G +G V + ++ A+K + + + + RE +L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 61 GNIVRLQDVVHSEKKLYLVFEY-----LDLDLKKHMDSCPDFANDPRLIKTFLYQILRGI 115
I L + LYLV +Y L L K D P+ + + +L +++ I
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE-----EMARFYLAEMVIAI 188
Query: 116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFS 175
H +HRD+KP N+L+D + ++LADFG
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGH-IRLADFGSC------------------------- 222
Query: 176 FLRYRVLAGSLILQFLKVVTLWYRAPEILL----GSRHYSTPVDVWSVGCIFAEMVNQRP 231
+++ + + V T Y +PEIL G Y D WS+G EM+
Sbjct: 223 ---LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279
Query: 232 LFPGDSEIDELFKIFR 247
F +S ++ KI
Sbjct: 280 PFYAESLVETYGKIMN 295
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPST---AIREISLLKEMQ 59
+++K++ +G G +G VYK E + + +E + P + E ++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 60 HGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILRG 114
+ ++ RL + + + L+ + + +++H D+ + + + QI +G
Sbjct: 110 NPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAKG 163
Query: 115 IAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYF 174
+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 164 MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE----------- 211
Query: 175 SFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 212 --------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 248
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 68
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 69 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 122
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 171
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 172 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 74
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 128
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 177
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 178 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 214
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
+++G G +G V K + + L+ E D + + E ++++++ + IVR
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 66 LQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + +E + LV E +L L K++ D +I+ ++Q+ G+ Y +
Sbjct: 77 MIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIE-LVHQVSMGMKYLEESNFV 133
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRDL +N+L+ + A K++DFGL++A + + G +
Sbjct: 134 HRDLAARNVLLVTQHYA-KISDFGLSKALRADENXYKAQTHGKWPVK------------- 179
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLFPG--DSEID 240
WY APE + +S+ DVWS G + E + Q+P + G SE+
Sbjct: 180 ------------WY-APEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVT 224
Query: 241 ELFKIFRVLGTP 252
+ + +G P
Sbjct: 225 AMLEKGERMGCP 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-- 59
D+ + + +G G +G V +A ++T + + ++ EG + R +L+ E++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKIL 86
Query: 60 -----HGNIVRLQDVVHSEKKLYLV------FEYLDLDLKKHMDSCPDFANDPR-LIKTF 107
H N+V L +V F L L+ + + P L K F
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 108 L---------YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158
L +Q+ +G+ + S + +HRDL +N+L+ + N +K+ DFGLAR
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NVVKICDFGLAR------- 198
Query: 159 TFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWS 218
IY R L L+++ APE + R Y+ DVWS
Sbjct: 199 ------------DIYKDPDYVRKGDARLPLKWM--------APETIF-DRVYTIQSDVWS 237
Query: 219 VGCIFAEM--VNQRPLFPGDSEIDELF 243
G + E+ + P +PG +IDE F
Sbjct: 238 FGVLLWEIFSLGASP-YPG-VKIDEEF 262
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 54/255 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-------HGN 62
+G G +G V +A ++T + + ++ EG + R +L+ E++ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHR--ALMSELKILIHIGHHLN 92
Query: 63 IVRLQDV-VHSEKKLYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFL---------YQ 110
+V L L ++ E+ +L ++ S +F L K FL +Q
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
+ +G+ + S + +HRDL +N+L+ + N +K+ DFGLAR
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEK-NVVKIXDFGLAR------------------- 192
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM--VN 228
IY R L L+++ APE + R Y+ DVWS G + E+ +
Sbjct: 193 DIYKDPDYVRKGDARLPLKWM--------APETIF-DRVYTIQSDVWSFGVLLWEIFSLG 243
Query: 229 QRPLFPGDSEIDELF 243
P +PG +IDE F
Sbjct: 244 ASP-YPG-VKIDEEF 256
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 97/263 (36%), Gaps = 62/263 (23%)
Query: 67 QDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
+++ H ++ L ++ E ++ +L + D A R + I I + HSH + H
Sbjct: 92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 151
Query: 126 RDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
RD+KP+NLL + LKL DFG A+ T ++ T
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFAKE--------TTQNALQT--------------- 188
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
T +Y APE+ LG Y D+WS+G I ++ P F ++
Sbjct: 189 --------PCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT------ 233
Query: 244 KIFRVLGTPNEDTWPGVT---SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+ PG+ L + P+W + L+ +L D
Sbjct: 234 ---------GQAISPGMKRRIRLGQYGFPNPEW---------SEVSEDAKQLIRLLLKTD 275
Query: 301 PSRRITARSALEHEYFRDVEFVP 323
P+ R+T + H + VP
Sbjct: 276 PTERLTITQFMNHPWINQSMVVP 298
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 54/255 (21%)
Query: 10 IGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-------HGN 62
+G G +G V +A ++T + + ++ EG + R +L+ E++ H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHR--ALMSELKILIHIGHHLN 92
Query: 63 IVRLQDVVHSEKK-LYLVFEYLDL-DLKKHMDSC-PDFANDPRLIKTFL---------YQ 110
+V L L ++ E+ +L ++ S +F L K FL +Q
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGI 170
+ +G+ + S + +HRDL +N+L+ + N +K+ DFGLAR
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEK-NVVKICDFGLAR------------------- 192
Query: 171 SIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM--VN 228
IY R L L+++ APE + R Y+ DVWS G + E+ +
Sbjct: 193 DIYKDPDYVRKGDARLPLKWM--------APETIF-DRVYTIQSDVWSFGVLLWEIFSLG 243
Query: 229 QRPLFPGDSEIDELF 243
P +PG +IDE F
Sbjct: 244 ASP-YPG-VKIDEEF 256
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
+++G G +G V K + + L+ E D + + E ++++++ + IVR
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 66 LQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + +E + LV E +L L K++ D +I+ ++Q+ G+ Y +
Sbjct: 73 MIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIE-LVHQVSMGMKYLEESNFV 129
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRDL +N+L+ + A K++DFGL++A + + G +
Sbjct: 130 HRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK------------- 175
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLFPG--DSEID 240
WY APE + +S+ DVWS G + E + Q+P + G SE+
Sbjct: 176 ------------WY-APEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVT 220
Query: 241 ELFKIFRVLGTP 252
+ + +G P
Sbjct: 221 AMLEKGERMGCP 232
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
+++G G +G V K + + L+ E D + + E ++++++ + IVR
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 66 LQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + +E + LV E +L L K++ D +I+ ++Q+ G+ Y +
Sbjct: 77 MIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIE-LVHQVSMGMKYLEESNFV 133
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRDL +N+L+ + A K++DFGL++A + + G +
Sbjct: 134 HRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK------------- 179
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLFPG--DSEID 240
WY APE + +S+ DVWS G + E + Q+P + G SE+
Sbjct: 180 ------------WY-APEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVT 224
Query: 241 ELFKIFRVLGTP 252
+ + +G P
Sbjct: 225 AMLEKGERMGCP 236
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
+++G G +G V K + + L+ E D + + E ++++++ + IVR
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 66 LQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + +E + LV E +L L K++ D +I+ ++Q+ G+ Y +
Sbjct: 83 MIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIE-LVHQVSMGMKYLEESNFV 139
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRDL +N+L+ + A K++DFGL++A + + G +
Sbjct: 140 HRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK------------- 185
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLFPG--DSEID 240
WY APE + +S+ DVWS G + E + Q+P + G SE+
Sbjct: 186 ------------WY-APEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVT 230
Query: 241 ELFKIFRVLGTP 252
+ + +G P
Sbjct: 231 AMLEKGERMGCP 242
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
+++G G +G V K + + L+ E D + + E ++++++ + IVR
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 66 LQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + +E + LV E +L L K++ D +I+ ++Q+ G+ Y +
Sbjct: 93 MIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIE-LVHQVSMGMKYLEESNFV 149
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRDL +N+L+ + A K++DFGL++A + + G +
Sbjct: 150 HRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK------------- 195
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLFPG--DSEID 240
WY APE + +S+ DVWS G + E + Q+P + G SE+
Sbjct: 196 ------------WY-APEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVT 240
Query: 241 ELFKIFRVLGTP 252
+ + +G P
Sbjct: 241 AMLEKGERMGCP 252
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
+++G G +G V K + + L+ E D + + E ++++++ + IVR
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 66 LQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + +E + LV E +L L K++ D +I+ ++Q+ G+ Y +
Sbjct: 93 MIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIE-LVHQVSMGMKYLEESNFV 149
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRDL +N+L+ + A K++DFGL++A + + G +
Sbjct: 150 HRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK------------- 195
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLFPG--DSEID 240
WY APE + +S+ DVWS G + E + Q+P + G SE+
Sbjct: 196 ------------WY-APEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVT 240
Query: 241 ELFKIFRVLGTP 252
+ + +G P
Sbjct: 241 AMLEKGERMGCP 252
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 101/235 (42%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 71
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI
Sbjct: 72 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAE 125
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFGLA+ G + + E
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAE---------- 174
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 175 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 211
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 97/263 (36%), Gaps = 62/263 (23%)
Query: 67 QDVVHSEKKLYLVFEYLDL-DLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLH 125
+++ H ++ L ++ E ++ +L + D A R + I I + HSH + H
Sbjct: 73 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 132
Query: 126 RDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLA 183
RD+KP+NLL + LKL DFG A+ T ++ T
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFAKE--------TTQNALQT--------------- 169
Query: 184 GSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELF 243
T +Y APE+ LG Y D+WS+G I ++ P F ++
Sbjct: 170 --------PCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT------ 214
Query: 244 KIFRVLGTPNEDTWPGVT---SLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMD 300
+ PG+ L + P+W + L+ +L D
Sbjct: 215 ---------GQAISPGMKRRIRLGQYGFPNPEW---------SEVSEDAKQLIRLLLKTD 256
Query: 301 PSRRITARSALEHEYFRDVEFVP 323
P+ R+T + H + VP
Sbjct: 257 PTERLTITQFMNHPWINQSMVVP 279
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
+++G G +G V K + + L+ E D + + E ++++++ + IVR
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 66 LQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + +E + LV E +L L K++ D +I+ ++Q+ G+ Y +
Sbjct: 91 MIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIE-LVHQVSMGMKYLEESNFV 147
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRDL +N+L+ + A K++DFGL++A + + G +
Sbjct: 148 HRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK------------- 193
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLFPG--DSEID 240
WY APE + +S+ DVWS G + E + Q+P + G SE+
Sbjct: 194 ------------WY-APEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVT 238
Query: 241 ELFKIFRVLGTP 252
+ + +G P
Sbjct: 239 AMLEKGERMGCP 250
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 EKIGEGTYGVVYKARNCVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVR 65
+++G G +G V K + + L+ E D + + E ++++++ + IVR
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 66 LQDVVHSEKKLYLVFEYLDLD-LKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 124
+ + +E + LV E +L L K++ D +I+ ++Q+ G+ Y +
Sbjct: 71 MIGICEAESWM-LVMEMAELGPLNKYLQQ-NRHVKDKNIIE-LVHQVSMGMKYLEESNFV 127
Query: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIYFSFLRYRVLAG 184
HRDL +N+L+ + A K++DFGL++A + + G +
Sbjct: 128 HRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK------------- 173
Query: 185 SLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN--QRPLFPG--DSEID 240
WY APE + +S+ DVWS G + E + Q+P + G SE+
Sbjct: 174 ------------WY-APEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVT 218
Query: 241 ELFKIFRVLGTP 252
+ + +G P
Sbjct: 219 AMLEKGERMGCP 230
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRL---EQEDEGVPSTA--IREISLLKE 57
+YEK +IG+G +G+V+K R +A+K + L E E E + RE+ ++
Sbjct: 22 EYEK--QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 58 MQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAY 117
+ H NIV+L ++H+ ++ + F + +D +L + I GI Y
Sbjct: 80 LNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL--RLMLDIALGIEY 137
Query: 118 CHSHR--VLHRDLKPQNLLIDR-RTNA---LKLADFGLAR 151
+ ++HRDL+ N+ + NA K+ADFG ++
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-- 59
D+ + + +G G +G V +A ++T + + ++ EG + R +L+ E++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKIL 84
Query: 60 -----HGNIVRLQDVVHSEKKLYLV------FEYLDLDLKKHMDSCPDFANDPR-LIKTF 107
H N+V L +V F L L+ + + P L K F
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 108 L---------YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158
L +Q+ +G+ + S + +HRDL +N+L+ + N +K+ DFGLAR
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NVVKICDFGLAR------- 196
Query: 159 TFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWS 218
IY R L L+++ APE + R Y+ DVWS
Sbjct: 197 ------------DIYKDPDXVRKGDARLPLKWM--------APETIF-DRVYTIQSDVWS 235
Query: 219 VGCIFAEM--VNQRPLFPGDSEIDELF 243
G + E+ + P +PG +IDE F
Sbjct: 236 FGVLLWEIFSLGASP-YPG-VKIDEEF 260
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 58/267 (21%)
Query: 2 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-- 59
D+ + + +G G +G V +A ++T + + ++ EG + R +L+ E++
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKIL 121
Query: 60 -----HGNIVRLQDVVHSEKKLYLV------FEYLDLDLKKHMDSCPDFANDPR-LIKTF 107
H N+V L +V F L L+ + + P L K F
Sbjct: 122 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 108 L---------YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158
L +Q+ +G+ + S + +HRDL +N+L+ + N +K+ DFGLAR
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-NVVKICDFGLAR------- 233
Query: 159 TFTHEHWGSTGISIYFSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWS 218
IY R L L+++ APE + R Y+ DVWS
Sbjct: 234 ------------DIYKDPDYVRKGDARLPLKWM--------APETIF-DRVYTIQSDVWS 272
Query: 219 VGCIFAEM--VNQRPLFPGDSEIDELF 243
G + E+ + P +PG +IDE F
Sbjct: 273 FGVLLWEIFSLGASP-YPG-VKIDEEF 297
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 101/235 (42%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 76
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 130
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFG A+ G + + E
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAE---------- 179
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 180 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 101/235 (42%), Gaps = 45/235 (19%)
Query: 3 QYEKVEKIGEGTYGVVYKARNCVTNETI----ALKKIRLEQEDEGVPSTAIREISLLKEM 58
+++K++ +G G +G VYK E + A+K++R E + E ++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASV 76
Query: 59 QHGNIVRLQDVVHSEKKLYLVFEYLDLD-----LKKHMDSCPDFANDPRLIKTFLYQILR 113
+ ++ RL + + + L+ + + +++H D+ + + + QI +
Sbjct: 77 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNI-----GSQYLLNWCVQIAK 130
Query: 114 GIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEHWGSTGISIY 173
G+ Y R++HRDL +N+L+ + +K+ DFG A+ G + + E
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAE---------- 179
Query: 174 FSFLRYRVLAGSLILQFLKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVN 228
G + ++++ + ++ +R Y+ DVWS G E++
Sbjct: 180 ---------GGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMT 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,784,763
Number of Sequences: 62578
Number of extensions: 418019
Number of successful extensions: 4561
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 922
Number of HSP's gapped (non-prelim): 1743
length of query: 323
length of database: 14,973,337
effective HSP length: 99
effective length of query: 224
effective length of database: 8,778,115
effective search space: 1966297760
effective search space used: 1966297760
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)