Query 036744
Match_columns 114
No_of_seqs 104 out of 423
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 05:04:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036744.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036744hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03650 MPC: Uncharacterised 100.0 6.5E-56 1.4E-60 323.3 6.8 105 1-111 1-105 (119)
2 KOG1589 Uncharacterized conser 100.0 7.1E-52 1.5E-56 300.1 6.5 101 4-110 8-108 (118)
3 KOG1590 Uncharacterized conser 100.0 1.4E-49 3.1E-54 292.2 3.6 108 3-110 5-112 (132)
4 PF03083 MtN3_slv: Sugar efflu 96.7 0.00041 8.9E-09 46.2 0.0 68 36-105 14-86 (87)
5 KOG1623 Multitransmembrane pro 89.4 0.21 4.6E-06 40.6 1.7 77 27-105 130-211 (243)
6 PF14795 Leucyl-specific: Leuc 46.7 9.8 0.00021 24.9 0.8 7 24-30 50-56 (56)
7 PF15048 OSTbeta: Organic solu 43.5 27 0.00059 26.1 2.9 42 67-108 23-67 (125)
8 KOG0984 Mitogen-activated prot 29.6 27 0.00058 29.2 1.0 18 18-35 101-118 (282)
9 cd01217 CG12581 CG12581 Phosph 25.3 42 0.00091 26.1 1.4 44 16-60 65-117 (158)
10 TIGR01100 V_ATP_synt_C vacuola 22.9 85 0.0018 22.7 2.5 35 33-67 19-61 (108)
No 1
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function.
Probab=100.00 E-value=6.5e-56 Score=323.27 Aligned_cols=105 Identities=50% Similarity=0.801 Sum_probs=101.2
Q ss_pred CchHHHHHHHcCCCCCCCCCCceeeeecccccccchhhhcccccCCCCcccChhhhHHHHHHhhhhhhheeeeeccchhH
Q 036744 1 MAASKLQALCVEPPCRSQNHCIVAVHFWAPTFKWGISIANIADFSKPPEKLSYPQQVAVTCTGLIWSRYSTVITPKNWNL 80 (114)
Q Consensus 1 ma~~~~~~~~~~pag~~~~~yp~T~hFWgP~~kWgi~iA~l~D~~kppe~IS~~mt~aL~~~g~i~~Rys~~I~P~Ny~L 80 (114)
|.++++|++|+||+| |+|||||||++|||||||||+|++||||+||++||+||++||+|||||||+|+||||+|
T Consensus 1 ~~~~~~~~~~~~~~g------p~T~hFWaP~~kWgl~iA~i~D~~rppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L 74 (119)
T PF03650_consen 1 MFPAKFRRFWNSPAG------PKTTHFWAPVAKWGLPIAGIADMKRPPEKISGPQTSALCATGLIWMRYSLVITPRNYLL 74 (119)
T ss_pred ChhHHHHHHHcCccc------cceEEeehhheeheeeeeehhhcCCCHHHHhHHHHHHHHHHHHHHHHHheeecCchHHH
Confidence 678899999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHhHHHHHhhhhccccchhhHhh
Q 036744 81 FAVNLAMAGTGLYQLSRKLQHDYFSEAQAVV 111 (114)
Q Consensus 81 ~ach~~~~~~q~~Ql~R~~~y~~~~~~~~~~ 111 (114)
|+||++|+++|++|++|+++|++.++++.++
T Consensus 75 ~a~n~~~~~~q~~Ql~R~~~y~~~~~~~~~~ 105 (119)
T PF03650_consen 75 FACNFFNATTQLYQLYRKLNYQYSQKKEAKQ 105 (119)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCchhHH
Confidence 9999999999999999999999998876543
No 2
>KOG1589 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=7.1e-52 Score=300.05 Aligned_cols=101 Identities=54% Similarity=0.912 Sum_probs=96.6
Q ss_pred HHHHHHHcCCCCCCCCCCceeeeecccccccchhhhcccccCCCCcccChhhhHHHHHHhhhhhhheeeeeccchhHHHH
Q 036744 4 SKLQALCVEPPCRSQNHCIVAVHFWAPTFKWGISIANIADFSKPPEKLSYPQQVAVTCTGLIWSRYSTVITPKNWNLFAV 83 (114)
Q Consensus 4 ~~~~~~~~~pag~~~~~yp~T~hFWgP~~kWgi~iA~l~D~~kppe~IS~~mt~aL~~~g~i~~Rys~~I~P~Ny~L~ac 83 (114)
+++|++||||+| |||+|||+|++|||||+|||+|++||||+||+.|+.||++||+||+|||+||+|+||+||+|
T Consensus 8 ~k~r~~WnhpaG------PKTVhFWAPt~KWglv~AglaD~arP~eklS~~q~~al~aTg~IWtRySlVI~PkN~~LfsV 81 (118)
T KOG1589|consen 8 AKLRPLWNHPAG------PKTVHFWAPTFKWGLVIAGLADLARPPEKLSYAQNAALTATGLIWTRYSLVITPKNYSLFSV 81 (118)
T ss_pred HHHHHHhcCCCC------CcEEEEecchhhhhheeecHHhhcCChHHcChhhhHHHHHhhhhheeeeEEEeccchhhhHH
Confidence 689999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhHHHHHhhhhccccchhhHh
Q 036744 84 NLAMAGTGLYQLSRKLQHDYFSEAQAV 110 (114)
Q Consensus 84 h~~~~~~q~~Ql~R~~~y~~~~~~~~~ 110 (114)
|+|++++|+|||.|+++|++.++.-+.
T Consensus 82 N~f~~~tg~~QL~Ri~~y~~~~~~~~~ 108 (118)
T KOG1589|consen 82 NFFVAITGIYQLTRIANYQQQQKALEG 108 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999777665443
No 3
>KOG1590 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.4e-49 Score=292.23 Aligned_cols=108 Identities=25% Similarity=0.409 Sum_probs=99.7
Q ss_pred hHHHHHHHcCCCCCCCCCCceeeeecccccccchhhhcccccCCCCcccChhhhHHHHHHhhhhhhheeeeeccchhHHH
Q 036744 3 ASKLQALCVEPPCRSQNHCIVAVHFWAPTFKWGISIANIADFSKPPEKLSYPQQVAVTCTGLIWSRYSTVITPKNWNLFA 82 (114)
Q Consensus 3 ~~~~~~~~~~pag~~~~~yp~T~hFWgP~~kWgi~iA~l~D~~kppe~IS~~mt~aL~~~g~i~~Rys~~I~P~Ny~L~a 82 (114)
..+.|++..--..+|+|+|..|||||||++|||||||+|.||+|+||.|||+||+||++||.+||||+|.|+||||+||+
T Consensus 5 ~~~~r~~~~~~~ske~r~Y~~sTHFWGPvaNwGlpiAal~DmkK~P~~ISG~MT~AL~~YS~vFMRfA~~VqPRN~LLfa 84 (132)
T KOG1590|consen 5 RMATRRFQDFLNSKEFRKYFMSTHFWGPVANWGLPIAALVDMKKSPEMISGRMTSALCLYSAVFMRFAWMVQPRNYLLFA 84 (132)
T ss_pred HHHHHHHHHHhcChHHhhhhhhcccccchhhccchHHHHHhccCChhhccccchHHHHHHHHHHHHHHHhcCcchhhHHH
Confidence 34556666666667779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhHHHHHhhhhccccchhhHh
Q 036744 83 VNLAMAGTGLYQLSRKLQHDYFSEAQAV 110 (114)
Q Consensus 83 ch~~~~~~q~~Ql~R~~~y~~~~~~~~~ 110 (114)
||++|+.+|++|++|+++|+|.+..+++
T Consensus 85 CHa~N~taQ~~Qg~Rf~~~~Y~~~~~e~ 112 (132)
T KOG1590|consen 85 CHATNETAQLAQGSRFLNYNYGSTGEEK 112 (132)
T ss_pred HhhhhHHHHHHHHHHHHHHHhcccchhh
Confidence 9999999999999999999998877654
No 4
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) []. Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This signature maps to transmembrane helices which are found in two copies in most members of the family.; GO: 0016021 integral to membrane
Probab=96.69 E-value=0.00041 Score=46.17 Aligned_cols=68 Identities=15% Similarity=0.282 Sum_probs=58.3
Q ss_pred hhhhccccc-----CCCCcccChhhhHHHHHHhhhhhhheeeeeccchhHHHHHHHHHhHhHHHHHhhhhccccc
Q 036744 36 ISIANIADF-----SKPPEKLSYPQQVAVTCTGLIWSRYSTVITPKNWNLFAVNLAMAGTGLYQLSRKLQHDYFS 105 (114)
Q Consensus 36 i~iA~l~D~-----~kppe~IS~~mt~aL~~~g~i~~Rys~~I~P~Ny~L~ach~~~~~~q~~Ql~R~~~y~~~~ 105 (114)
+-++++.|+ +|..|.+|..+..+..+-+.+|.+|.+.+ +|+.++.+|++-...+++|+.=++.|...+
T Consensus 14 ~~~spl~~i~~v~k~ks~~~~~~~~~~~~~~~~~~W~~YG~l~--~d~~i~~~N~~g~~~~~~~~~~~~~y~~~~ 86 (87)
T PF03083_consen 14 MFLSPLPQIRQVIKTKSTGSVSFPPFLAMFFNCVLWLIYGILI--NDWPIIVPNVFGLVLSIIYLVVYYIYPSKK 86 (87)
T ss_pred HHHHHHHHHHHHHhCCCCCccceehhHHHhhhccHhhhhhhhc--CCeeEEeeHHHHHHHHHHHHhheEEeCCCC
Confidence 344445554 79999999999999999999999999988 599999999999999999999888866543
No 5
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=89.39 E-value=0.21 Score=40.64 Aligned_cols=77 Identities=19% Similarity=0.244 Sum_probs=63.5
Q ss_pred ecccccccchhhhccccc-----CCCCcccChhhhHHHHHHhhhhhhheeeeeccchhHHHHHHHHHhHhHHHHHhhhhc
Q 036744 27 FWAPTFKWGISIANIADF-----SKPPEKLSYPQQVAVTCTGLIWSRYSTVITPKNWNLFAVNLAMAGTGLYQLSRKLQH 101 (114)
Q Consensus 27 FWgP~~kWgi~iA~l~D~-----~kppe~IS~~mt~aL~~~g~i~~Rys~~I~P~Ny~L~ach~~~~~~q~~Ql~R~~~y 101 (114)
+-+-++|=..-.|.|+|| +|..|.+....+.|+.+.+..|.=|.+.| +|..+..-|+.-...++.|+.=+.+|
T Consensus 130 ~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGlli--~D~~IaipN~iG~~l~~~QL~Ly~~y 207 (243)
T KOG1623|consen 130 IVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLLI--KDFFIAIPNVLGFLLGLIQLILYFKY 207 (243)
T ss_pred hhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHHHHHHHHHHh--cCeEEEcccHHHHHHHHHHHHHhhhc
Confidence 345556666667777886 68999999999999999999999999988 89988888998888999999877665
Q ss_pred cccc
Q 036744 102 DYFS 105 (114)
Q Consensus 102 ~~~~ 105 (114)
....
T Consensus 208 ~~~~ 211 (243)
T KOG1623|consen 208 PKTT 211 (243)
T ss_pred CCCc
Confidence 4444
No 6
>PF14795 Leucyl-specific: Leucine-tRNA synthetase-specific domain; PDB: 1OBC_A 2BTE_A 2V0G_A 2BYT_A 1OBH_A 1H3N_A 2V0C_A.
Probab=46.69 E-value=9.8 Score=24.86 Aligned_cols=7 Identities=57% Similarity=1.749 Sum_probs=6.4
Q ss_pred eeeeccc
Q 036744 24 AVHFWAP 30 (114)
Q Consensus 24 T~hFWgP 30 (114)
|+|||-|
T Consensus 50 ~~h~WKP 56 (56)
T PF14795_consen 50 TLHFWKP 56 (56)
T ss_dssp SEEEEEE
T ss_pred eEeecCC
Confidence 9999987
No 7
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=43.54 E-value=27 Score=26.12 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=35.8
Q ss_pred hhheeee---eccchhHHHHHHHHHhHhHHHHHhhhhccccchhh
Q 036744 67 SRYSTVI---TPKNWNLFAVNLAMAGTGLYQLSRKLQHDYFSEAQ 108 (114)
Q Consensus 67 ~Rys~~I---~P~Ny~L~ach~~~~~~q~~Ql~R~~~y~~~~~~~ 108 (114)
|+|.+++ +|=||.+++--++....++.-|.|.++.++..|..
T Consensus 23 mlW~fR~ED~tpWNysiL~Ls~vvlvi~~~LLgrsi~ANRnrK~~ 67 (125)
T PF15048_consen 23 MLWFFRVEDATPWNYSILALSFVVLVISFFLLGRSIQANRNRKMQ 67 (125)
T ss_pred HHHheecCCCCCcchHHHHHHHHHHHHHHHHHHHHhHhccccccc
Confidence 5666766 68899999999999999999999999988777665
No 8
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=29.60 E-value=27 Score=29.23 Aligned_cols=18 Identities=33% Similarity=0.737 Sum_probs=14.3
Q ss_pred CCCCceeeeecccccccc
Q 036744 18 QNHCIVAVHFWAPTFKWG 35 (114)
Q Consensus 18 ~~~yp~T~hFWgP~~kWg 35 (114)
-.+||+|+||.|-.+.-|
T Consensus 101 ~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 101 TVDCPFTVHFYGALFREG 118 (282)
T ss_pred CCCCCeEEEeehhhhccc
Confidence 357999999999777544
No 9
>cd01217 CG12581 CG12581 Phosphotyrosine-binding (PTB) domain. CG12581 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=25.29 E-value=42 Score=26.08 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=31.5
Q ss_pred CCCCCCce-eeeecccccccchhh--------hcccccCCCCcccChhhhHHHH
Q 036744 16 RSQNHCIV-AVHFWAPTFKWGISI--------ANIADFSKPPEKLSYPQQVAVT 60 (114)
Q Consensus 16 ~~~~~yp~-T~hFWgP~~kWgi~i--------A~l~D~~kppe~IS~~mt~aL~ 60 (114)
+|.+.||+ |+|+|+.| |+-++= |++.-+--|||.|...+-.-|.
T Consensus 65 ~E~~~fP~~~i~~~aAV-kfVi~~~~~~~~~~~aFLPL~t~~~ni~~~~H~PiF 117 (158)
T cd01217 65 NETLFFPIHNLHYCAAV-RFVISDGFKVDDGGAAFLPLDSPFANIPIHVHPPIF 117 (158)
T ss_pred ccccccccceeeEeeEE-EEEeccCcccCCCcccccccCCChhhCCCcCCCCeE
Confidence 34455676 89999987 666554 5666678899999977766553
No 10
>TIGR01100 V_ATP_synt_C vacuolar ATP synthase 16 kDa proteolipid subunit. The principal role V-ATPases are the acidification of intracellular compartments of eukaryotic cells.
Probab=22.86 E-value=85 Score=22.66 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=23.4
Q ss_pred ccchhhhc--cccc-CCCCc-----ccChhhhHHHHHHhhhhh
Q 036744 33 KWGISIAN--IADF-SKPPE-----KLSYPQQVAVTCTGLIWS 67 (114)
Q Consensus 33 kWgi~iA~--l~D~-~kppe-----~IS~~mt~aL~~~g~i~~ 67 (114)
-||..+|| ++-. -+.|| .|+.-|..++.+||+|-+
T Consensus 19 A~G~~~aG~~~a~~gv~~P~~~~k~lI~vi~~g~~gIYGlIia 61 (108)
T TIGR01100 19 AYGTAKSGVGIAAMGVMRPELIMKSIIPVVMAGIIAIYGLVVA 61 (108)
T ss_pred HHHHHHhhhhhHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777777 3332 12277 566778889999999944
Done!