BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036754
(405 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 278 RMFSYLELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFK-SFDIE 336
+ FS EL A+ FS N++ +GGFG VYK RL DG VAVK + + + F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY---SSNCILDIFQRLNIM 393
EM+ H+NL+++ C + LV YM +GS+ L S LD +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 394 IDVASALEYLH 404
+ A L YLH
Sbjct: 146 LGSARGLAYLH 156
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 278 RMFSYLELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFK-SFDIE 336
+ FS EL A+ F N++ +GGFG VYK RL DG VAVK + + + F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY---SSNCILDIFQRLNIM 393
EM+ H+NL+++ C + LV YM +GS+ L S LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 394 IDVASALEYLH 404
+ A L YLH
Sbjct: 138 LGSARGLAYLH 148
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 283 LELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKS 342
++L AT F LI G FG VYK L DG +VA+K + + + F+ E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 343 IRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASA 399
RH +L+ +I C L+ +YM +G+L+++LY S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 400 LEYLH 404
L YLH
Sbjct: 152 LHYLH 156
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 283 LELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKS 342
++L AT F LI G FG VYK L DG +VA+K + + + F+ E E +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 343 IRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASA 399
RH +L+ +I C L+ +YM +G+L+++LY S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 400 LEYLH 404
L YLH
Sbjct: 152 LHYLH 156
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 104 TFWNLKDILYLNFSV------IPIEIGGLPNLEYLFLGYNRLQGSIPDSFGDLIXXXXXX 157
TF N +++L+ S IP EIG +P L L LG+N + GSIPD GDL
Sbjct: 624 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 683
Query: 158 XXXXXXXGAIPASXXXXXXXXXXXXSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPNL 217
G IP + S N L G IP G F F F N LCG P
Sbjct: 684 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP 743
Query: 218 QVQPCKTG--IHHTSS 231
+ P HH S
Sbjct: 744 RCDPSNADGYAHHQRS 759
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Query: 87 SLRKLSLDSNELTS-IPLTFWNLKDILYLNFS------VIPIEIGGLPNLEYLFLGYNRL 139
+L++L L +N T IP T N +++ L+ S IP +G L L L L N L
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 451
Query: 140 QGSIPDSFGDLIXXXXXXXXXXXXXGAIPASXXXXXXXXXXXXSFNKLEGEIPR 193
+G IP + G IP+ S N+L GEIP+
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 43/118 (36%), Gaps = 9/118 (7%)
Query: 86 ASLRKLSLDSNELTS--IPLTFWNLKDIL---YLN----FSVIPIEIGGLPNLEYLFLGY 136
ASL L L SN + +P N K+ L YL IP + L L L +
Sbjct: 365 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 424
Query: 137 NRLQGSIPDSFGDLIXXXXXXXXXXXXXGAIPASXXXXXXXXXXXXSFNKLEGEIPRG 194
N L G+IP S G L G IP FN L GEIP G
Sbjct: 425 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 482
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 85 LASLRKLSLDSNELTS-IPLTFWNLKDILYLNFS------VIPIEIGGLPNLEYLFLGYN 137
+ +L L LD N+LT IP N ++ +++ S IP IG L NL L L N
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 521
Query: 138 RLQGSIPDSFGDLIXXXXXXXXXXXXXGAIPAS 170
G+IP GD G IPA+
Sbjct: 522 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 554
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 39/178 (21%)
Query: 1 LSFLSSLSNCKCLTFIDLSNNPLDSVLPKTFVGNVS-----HSLEFFVMSYCNISGGXXX 55
++ L+SL +C L F+++S+N LD F G VS +SLE +S +ISG
Sbjct: 113 VTTLTSLGSCSGLKFLNVSSNTLD------FPGKVSGGLKLNSLEVLDLSANSISGANVV 166
Query: 56 XXXXXX---XXXXXXXXXXKLNGSISITLGSNL--------------------ASLRKLS 92
K++G + ++ NL ++L+ L
Sbjct: 167 GWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLD 226
Query: 93 LDSNELT-SIPLTFWNLKDILYLNFS----VIPIEIGGLPNLEYLFLGYNRLQGSIPD 145
+ N+L+ ++ LN S V PI L +L+YL L N+ G IPD
Sbjct: 227 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 284
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 104 TFWNLKDILYLNFSV------IPIEIGGLPNLEYLFLGYNRLQGSIPDSFGDLIXXXXXX 157
TF N +++L+ S IP EIG +P L L LG+N + GSIPD GDL
Sbjct: 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686
Query: 158 XXXXXXXGAIPASXXXXXXXXXXXXSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSPNL 217
G IP + S N L G IP G F F F N LCG P
Sbjct: 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP 746
Query: 218 QVQP 221
+ P
Sbjct: 747 RCDP 750
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Query: 87 SLRKLSLDSNELTS-IPLTFWNLKDILYLNFS------VIPIEIGGLPNLEYLFLGYNRL 139
+L++L L +N T IP T N +++ L+ S IP +G L L L L N L
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 140 QGSIPDSFGDLIXXXXXXXXXXXXXGAIPASXXXXXXXXXXXXSFNKLEGEIPR 193
+G IP + G IP+ S N+L GEIP+
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 43/118 (36%), Gaps = 9/118 (7%)
Query: 86 ASLRKLSLDSNELTS--IPLTFWNLKDIL---YLN----FSVIPIEIGGLPNLEYLFLGY 136
ASL L L SN + +P N K+ L YL IP + L L L +
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427
Query: 137 NRLQGSIPDSFGDLIXXXXXXXXXXXXXGAIPASXXXXXXXXXXXXSFNKLEGEIPRG 194
N L G+IP S G L G IP FN L GEIP G
Sbjct: 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 85 LASLRKLSLDSNELTS-IPLTFWNLKDILYLNFS------VIPIEIGGLPNLEYLFLGYN 137
+ +L L LD N+LT IP N ++ +++ S IP IG L NL L L N
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 138 RLQGSIPDSFGDLIXXXXXXXXXXXXXGAIPAS 170
G+IP GD G IPA+
Sbjct: 525 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 39/178 (21%)
Query: 1 LSFLSSLSNCKCLTFIDLSNNPLDSVLPKTFVGNVS-----HSLEFFVMSYCNISGGXXX 55
++ L+SL +C L F+++S+N LD F G VS +SLE +S +ISG
Sbjct: 116 VTTLTSLGSCSGLKFLNVSSNTLD------FPGKVSGGLKLNSLEVLDLSANSISGANVV 169
Query: 56 XXXXXX---XXXXXXXXXXKLNGSISITLGSNL--------------------ASLRKLS 92
K++G + ++ NL ++L+ L
Sbjct: 170 GWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLD 229
Query: 93 LDSNELT-SIPLTFWNLKDILYLNFS----VIPIEIGGLPNLEYLFLGYNRLQGSIPD 145
+ N+L+ ++ LN S V PI L +L+YL L N+ G IPD
Sbjct: 230 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 287
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 153 QICKGMEYL 161
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 125 QICKGMEYL 133
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 129 QICKGMEYL 137
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 126 QICKGMEYL 134
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 122 QICKGMEYL 130
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 127 QICKGMEYL 135
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 67
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 128 QICKGMEYL 136
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 121 QICKGMEYL 129
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL +D + L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 123 QICKGMEYL 131
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFK--SFDIECEMMKSIRHQNLIKVISSC 355
I G FG+V++A G +VAVK+ Q A + F E +MK +RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 356 SNEEFKALVLEYMPHGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLH 404
+ ++V EY+ GSL + L+ S LD +RL++ DVA + YLH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++EY+P+GSL YL + +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 125 QICKGMEYL 133
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFK--SFDIECEMMKSIRHQNLIKVISSC 355
I G FG+V++A G +VAVK+ Q A + F E +MK +RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 356 SNEEFKALVLEYMPHGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLH 404
+ ++V EY+ GSL + L+ S LD +RL++ DVA + YLH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 291 KFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIECEMM 340
+F E +L + KG FGSV R L D G VAVK + F+ E E++
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 341 KSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 398
KS++H N++K C + + L++EY+P+GSL YL +D + L +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 399 ALEYL 403
+EYL
Sbjct: 144 GMEYL 148
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 291 KFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIECEMM 340
+F E +L + KG FGSV R L D G VAVK + F+ E E++
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 341 KSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 398
KS++H N++K C + + L++EY+P+GSL YL +D + L +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 399 ALEYL 403
+EYL
Sbjct: 144 GMEYL 148
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 291 KFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIECEMM 340
+F E +L + KG FGSV R L D G VAVK + F+ E E++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 341 KSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 398
KS++H N++K C + + L++EY+P+GSL YL +D + L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 399 ALEYL 403
+EYL
Sbjct: 126 GMEYL 130
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 291 KFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIECEMM 340
+F E +L + KG FGSV R L D G VAVK + F+ E E++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 341 KSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 398
KS++H N++K C + + L++EY+P+GSL YL +D + L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 399 ALEYL 403
+EYL
Sbjct: 126 GMEYL 130
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 291 KFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIECEMM 340
+F E +L + KG FGSV R L D G VAVK + F+ E E++
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
Query: 341 KSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 398
KS++H N++K C + + L++EY+P+GSL YL +D + L +
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 399 ALEYL 403
+EYL
Sbjct: 124 GMEYL 128
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 287 RATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIE 336
R +F E +L + KG FGSV R L D G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
E++KS++H N++K C + + L++E++P+GSL +YL +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 395 DVASALEYL 403
+ +EYL
Sbjct: 125 QICKGMEYL 133
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 304 GSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSIRHQNLIKVISSCSNE--E 359
G ++K R G ++ VKV ++ R + F+ EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 360 FKALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLH 404
L+ +MP+GSL L+ +N ++D Q + +D+A + +LH
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH 128
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 280 FSYLELCRATYKFSEN------NLISKGGFGSVYKARLGDGMEVAVK----VFNLQCRRA 329
FS+ EL T F E N + +GGFG VYK + + VAVK + ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 330 FKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-----L 384
+ FD E ++M +H+NL++++ S+ + LV YMP+GSL L +C+ L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPL 130
Query: 385 DIFQRLNIMIDVASALEYLH 404
R I A+ + +LH
Sbjct: 131 SWHMRCKIAQGAANGINFLH 150
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 280 FSYLELCRATYKFSEN------NLISKGGFGSVYKARLGDGMEVAVK----VFNLQCRRA 329
FS+ EL T F E N + +GGFG VYK + + VAVK + ++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 330 FKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-----L 384
+ FD E ++M +H+NL++++ S+ + LV YMP+GSL L +C+ L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPL 124
Query: 385 DIFQRLNIMIDVASALEYLH 404
R I A+ + +LH
Sbjct: 125 SWHMRCKIAQGAANGINFLH 144
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 280 FSYLELCRATYKFSEN------NLISKGGFGSVYKARLGDGMEVAVK----VFNLQCRRA 329
FS+ EL T F E N + +GGFG VYK + + VAVK + ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 330 FKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-----L 384
+ FD E ++M +H+NL++++ S+ + LV YMP+GSL L +C+ L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPL 130
Query: 385 DIFQRLNIMIDVASALEYLH 404
R I A+ + +LH
Sbjct: 131 SWHMRCKIAQGAANGINFLH 150
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 298 ISKGGFGSVYKAR------LGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
+ +G FG V+ A D M VAVK A K F E E++ +++H++++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYS---------------SNCILDIFQRLNIMIDV 396
C + + +V EYM HG L K+L + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 397 ASALEYL---HF 405
AS + YL HF
Sbjct: 143 ASGMVYLASQHF 154
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNL--QCRRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ + F++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL K+L+ +FQ ++I A ++YLH
Sbjct: 101 MTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH 149
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 298 ISKGGFGSVYKARL------GDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
+ +G FG V+ A D M VAVK A + F E E++ ++HQ++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYS 379
C+ +V EYM HG L ++L S
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRS 107
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 298 ISKGGFGSVYKARL------GDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
+ +G FG V+ A D M VAVK A + F E E++ ++HQ++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYS 379
C+ +V EYM HG L ++L S
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRS 113
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 304 GSVYKARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSIRHQNLIKVISSCSNE--E 359
G ++K R G ++ VKV ++ R + F+ EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 360 FKALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLH 404
L+ + P+GSL L+ +N ++D Q + +D A +LH
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH 128
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 298 ISKGGFGSVYKARL------GDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
+ +G FG V+ A D M VAVK A + F E E++ ++HQ++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYS 379
C+ +V EYM HG L ++L S
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRS 136
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNL-------QCRRAFKSFDIECEMMKSIRHQNLI 349
I KGGFG V+K RL D VA+K L + F+ F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
K+ N +V+E++P G L L + +L +M+D+A +EY+
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNL-------QCRRAFKSFDIECEMMKSIRHQNLI 349
I KGGFG V+K RL D VA+K L + F+ F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
K+ N +V+E++P G L L + +L +M+D+A +EY+
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNL-------QCRRAFKSFDIECEMMKSIRHQNLI 349
I KGGFG V+K RL D VA+K L + F+ F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
K+ N +V+E++P G L L + +L +M+D+A +EY+
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 295 NNLISKGGFGSVYKARLG-DG--MEVAVKVFN-LQCRRAFKSFDIECEMM-KSIRHQNLI 349
++I +G FG V KAR+ DG M+ A+K + + F E E++ K H N+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---------------LDIFQRLNIMI 394
++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 395 DVASALEYL 403
DVA ++YL
Sbjct: 147 DVARGMDYL 155
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQCRRAF-----KSFDIECEMMKSIRHQNLIKV 351
I +G FG V+ RL D VAVK CR F E ++K H N++++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK----SCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
I C+ ++ +V+E + G +L + L + L ++ D A+ +EYL
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 295 NNLISKGGFGSVYKARLG-DG--MEVAVKVFN-LQCRRAFKSFDIECEMM-KSIRHQNLI 349
++I +G FG V KAR+ DG M+ A+K + + F E E++ K H N+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---------------LDIFQRLNIMI 394
++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 395 DVASALEYL 403
DVA ++YL
Sbjct: 140 DVARGMDYL 148
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQCRRAF-----KSFDIECEMMKSIRHQNLIKV 351
I +G FG V+ RL D VAVK CR F E ++K H N++++
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK----SCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
I C+ ++ +V+E + G +L + L + L ++ D A+ +EYL
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 295 NNLISKGGFGSVYKARLG-DG--MEVAVKVFN-LQCRRAFKSFDIECEMM-KSIRHQNLI 349
++I +G FG V KAR+ DG M+ A+K + + F E E++ K H N+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---------------LDIFQRLNIMI 394
++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 395 DVASALEYL 403
DVA ++YL
Sbjct: 150 DVARGMDYL 158
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 298 ISKGGFGSVYKARL------GDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
+ +G FG V+ A D + VAVK A K F E E++ +++H++++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYL 377
C + +V EYM HG L K+L
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFL 106
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 295 NNLISKGGFGSVYKA-RLGDGMEVAVKVF----NLQCRRAFKSFDIECEMMKSIRHQNLI 349
+I GGFG VY+A +GD EVAVK + + ++ E ++ ++H N+I
Sbjct: 12 EEIIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ C E LV+E+ G L + L DI +N + +A + YLH
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLH 122
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 293 SENNLISKGGFGSVYKARLGDG---MEVAVKVFNLQCRRAFKS---FDIECEMMKSIRHQ 346
+ +I G FG VYK L EV V + L+ K F E +M H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 347 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
N+I++ S + ++ EYM +G+L+K+L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 277 WRMFSYLELCRATYKFSEN------NLISKGGFGSVYKARLGDGMEVAVK----VFNLQC 326
+ FS+ EL T F E N +GGFG VYK + + VAVK + ++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 327 RRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI--- 383
+ FD E ++ +H+NL++++ S+ + LV Y P+GSL L +C+
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGT 118
Query: 384 --LDIFQRLNIMIDVASALEYLH 404
L R I A+ + +LH
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLH 141
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 360 FKALVLEYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYL 403
+V EYMP+G+L YL N + L + ++SA+EYL
Sbjct: 102 PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 5 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 61
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 62 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 403 LH 404
+
Sbjct: 121 IE 122
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L++S ++ + ++I A ++YLH
Sbjct: 89 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 18 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 74
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 75 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 133
Query: 403 LH 404
+
Sbjct: 134 IE 135
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L++S ++ + ++I A ++YLH
Sbjct: 77 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 125
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDG-MEVAVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR VA+KV F Q + + E E+ + H N++++ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G L K L S C D + IM ++A AL Y H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEELADALMYCH 140
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 17 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 73
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 74 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 132
Query: 403 LH 404
+
Sbjct: 133 IE 134
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 11 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 67
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 68 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 403 LH 404
+
Sbjct: 127 IE 128
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 403 LH 404
+
Sbjct: 125 IE 126
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 403 LH 404
+
Sbjct: 125 IE 126
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 10 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 66
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 67 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 403 LH 404
+
Sbjct: 126 IE 127
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 72 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 403 LH 404
+
Sbjct: 131 IE 132
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 19 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 75
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 76 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 134
Query: 403 LH 404
+
Sbjct: 135 IE 136
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 403 LH 404
+
Sbjct: 125 IE 126
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 296 NLISKGGFGSVYKARLGDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVIS 353
LI KG FG VY R EVA+++ +++ K+F E + RH+N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+C + A++ +L + + +LD+ + I ++ + YLH
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 72 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 403 LH 404
+
Sbjct: 131 IE 132
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 14 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 70
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 71 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 403 LH 404
+
Sbjct: 130 IE 131
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI--RHQNLIKVISSC 355
+ KG +G V++ G VAVK+F+ R KS+ E E+ ++ RH+N++ I+S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 356 SNEEFKA----LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 405
+ L+ Y GSL YL + LD L I++ +AS L +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHI 152
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G FG V+ +VAVK Q + +F E +MK +
Sbjct: 4 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 60
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 61 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 403 LH 404
+
Sbjct: 120 IE 121
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 298 ISKGGFGSVYKARLGD--GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSC 355
I KG FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 356 SNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLH 404
E+ +V EYM GSL YL S +L L +DV A+EYL
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 284 ELCRATYKFSENN---LISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDIECEM 339
+L Y++ EN ++ KG +G VY R L + + +A+K + R + E +
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 340 MKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMI-DVA 397
K ++H+N+++ + S S F + +E +P GSL L S + D Q + +
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 132
Query: 398 SALEYLH 404
L+YLH
Sbjct: 133 EGLKYLH 139
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L++S ++ + ++I A ++YLH
Sbjct: 89 STAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
+++E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 88 PFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 133
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 298 ISKGGFGSVYKARL---GD--GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIKV 351
+ +G FG V R GD G +VAVK + E E+++++ H+N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 352 ISSCSNEEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
C+ + L++E++P GSL++YL + +++ Q+L + + ++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 312 GDGMEVAVKVFNLQCRRAFKS-FDIECEMMKSIRHQNLIKVISSCSNEEFKA--LVLEYM 368
G G VAVK C +S + E E+++++ H++++K C ++ K+ LV+EY+
Sbjct: 35 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 369 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
P GSL YL +C+ + Q L + + YLH
Sbjct: 95 PLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLH 128
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 312 GDGMEVAVKVFNLQCRRAFKS-FDIECEMMKSIRHQNLIKVISSCSNEEFKA--LVLEYM 368
G G VAVK C +S + E E+++++ H++++K C ++ K+ LV+EY+
Sbjct: 36 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 369 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
P GSL YL +C+ + Q L + + YLH
Sbjct: 96 PLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLH 129
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 298 ISKGGFGSVYKARL---GD--GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIKV 351
+ +G FG V R GD G +VAVK + E E+++++ H+N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 352 ISSCSNEEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
C+ + L++E++P GSL++YL + +++ Q+L + + ++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 151
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 298 ISKGGFGSVYKARLGD--GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSC 355
I KG FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 29 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 356 SNEEFK-ALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLH 404
E+ +V EYM GSL YL S +L L +DV A+EYL
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 298 ISKGGFGSVYKARLGD--GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSC 355
I KG FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 356 SNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLH 404
E+ +V EYM GSL YL S +L L +DV A+EYL
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 161
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
+++E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 84 PFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 129
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 296 NLISKGGFGSVYKARL----GDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSIRHQNLI 349
++ +G FGSV + L G ++VAVK L +R + F E MK H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 350 KVISSCSNEEFKAL-----VLEYMPHGSLEKYLYSSNC-----ILDIFQRLNIMIDVASA 399
+++ C + + +L +M +G L YL S + + L M+D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 400 LEYL 403
+EYL
Sbjct: 160 MEYL 163
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 297 LISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCS 356
LI +G +G+VYK L D VAVKVF+ R+ F + + + + H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFI--VG 75
Query: 357 NEEFKA-------LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+E A LV+EY P+GSL KYL S D + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLH 128
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI--RHQNLIKVISSC 355
+ KG +G V++ G VAVK+F+ R KS+ E E+ ++ RH+N++ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 356 SNEEFKA----LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 405
+ L+ Y GSL YL + LD L I++ +AS L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHI 123
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 298 ISKGGFGSVYKARLGD--GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSC 355
I KG FG V LGD G +VAVK ++ ++F E +M +RH NL++++
Sbjct: 201 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 356 SNEEFK-ALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMIDVASALEYLH 404
E+ +V EYM GSL YL S +L L +DV A+EYL
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI--RHQNLIKVISSC 355
+ KG +G V++ G VAVK+F+ R KS+ E E+ ++ RH+N++ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 356 SNEEFKA----LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 405
+ L+ Y GSL YL + LD L I++ +AS L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHI 123
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 265 LSNDANMPIVATWRMFSYLELCRATYKFSENNLISKGGFGSVYKA-RLGDG----MEVAV 319
L+ P A R+ EL R ++ G FG+VYK + +G + VA+
Sbjct: 20 LTPSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAI 72
Query: 320 KVFNLQC-RRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY 378
K+ N +A F E +M S+ H +L++++ C + + LV + MPHG L +Y++
Sbjct: 73 KILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH 131
Query: 379 SSNCILDIFQRLNIMIDVASALEYL 403
+ LN + +A + YL
Sbjct: 132 EHKDNIGSQLLLNWCVQIAKGMMYL 156
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 290 YKFSENN---LISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRH 345
Y++ EN ++ KG +G VY R L + + +A+K + R + E + K ++H
Sbjct: 5 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 64
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMI-DVASALEYL 403
+N+++ + S S F + +E +P GSL L S + D Q + + L+YL
Sbjct: 65 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 404 H 404
H
Sbjct: 125 H 125
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLH 404
+++E+M +G+L YL N + L + ++SA+EYL
Sbjct: 81 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 88 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 133
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 88 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 133
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLH 404
+++E+M +G+L YL N + L + ++SA+EYL
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 312 GDGMEVAVKVFNLQCRRAFKS-FDIECEMMKSIRHQNLIKVISSCSNEEFKAL--VLEYM 368
G G VAVK C +S + E ++++++ H+++IK C ++ K+L V+EY+
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 369 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
P GSL YL + + + Q L + + YLH
Sbjct: 101 PLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH 134
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G FG VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLH 404
++ E+M +G+L YL N + L + ++SA+EYL
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 312 GDGMEVAVKVFNLQCRRAFKS-FDIECEMMKSIRHQNLIKVISSCSNEEFKAL--VLEYM 368
G G VAVK C +S + E ++++++ H+++IK C ++ K+L V+EY+
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 369 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
P GSL YL + + + Q L + + YLH
Sbjct: 101 PLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH 134
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 18/118 (15%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAF-----KSFDIECEMMKSIRHQNLIKV--- 351
GGFG V + D G +VA+K QCR+ + + +E ++MK + H N++
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 352 ---ISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLH 404
+ + + L +EY G L KYL + + C L ++ D++SAL YLH
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 83 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 128
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 84 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 129
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 328
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYL 403
++ E+M +G+L YL N ++ L + ++SA+EYL
Sbjct: 329 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 86
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 87 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 132
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 83 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 128
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 286
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYL 403
++ E+M +G+L YL N ++ L + ++SA+EYL
Sbjct: 287 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 18/118 (15%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAF-----KSFDIECEMMKSIRHQNLIKV--- 351
GGFG V + D G +VA+K QCR+ + + +E ++MK + H N++
Sbjct: 26 GGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 352 ---ISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLH 404
+ + + L +EY G L KYL + + C L ++ D++SAL YLH
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 130
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLH 404
+++E+M +G+L YL N + L + ++SA+EYL
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 88 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 133
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 95
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 96 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 141
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 130
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 360 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI------DVASALEYLH 404
++ E+M +G+L YL N Q +N ++ ++SA+EYL
Sbjct: 85 PFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE 130
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 289
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYL 403
++ E+M +G+L YL N + L + ++SA+EYL
Sbjct: 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 126
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 296 NLISKGGFGSVYKARLGDGMEVAVKV----FNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
++ KG FG K + EV V F+ + +R F E ++M+ + H N++K
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK---EVKVMRCLEHPNVLKF 72
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
I ++ + EY+ G+L + S + QR++ D+AS + YLH
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH 125
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 75 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 123
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 149
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLH 404
++ E+M +G+L YL N + L + ++SA+EYL
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 100 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 148
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLH 404
++ E+M +G+L YL N + L + ++SA+EYL
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLH 404
++ E+M +G+L YL N + L + ++SA+EYL
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEE 359
G +G VY+ + VAVK + F E +MK I+H NL++++ C+ E
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 360 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLH 404
++ E+M +G+L YL N + L + ++SA+EYL
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 272 PIVATWRMFSYLELCRATYKFSENNLISKGGFGSVYKA-RLGDG----MEVAVKVFNLQC 326
P A R+ EL R ++ G FG+VYK + +G + VA+K+ N
Sbjct: 4 PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 327 -RRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 385
+A F E +M S+ H +L++++ C + + LV + MPHG L +Y++ +
Sbjct: 57 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 115
Query: 386 IFQRLNIMIDVASALEYL 403
LN + +A + YL
Sbjct: 116 SQLLLNWCVQIAKGMMYL 133
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 93 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 141
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 298 ISKGGFGSVYKARL-GDGMEVAVKVFNLQC--RRAFKSFDIECEMMKSIRHQNLIKVISS 354
I G FG+VYK + GD VAVK+ N+ + ++F E +++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + A+V ++ SL +L+ ++ + ++I A ++YLH
Sbjct: 73 STAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R T K E + G G V+ +VAVK Q + +F E +MK +
Sbjct: 9 EVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIMIDVASALEY 402
+HQ L+++ + + E ++ EYM +GSL +L + + I L I + L++ +A + +
Sbjct: 66 QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 403 LH 404
+
Sbjct: 125 IE 126
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 358 EEFKALVLEYMPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L + L + Q +++ +AS + Y+
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 291 KFSENNLISKGGFGSVYKARL----GDGMEVAVKVF--NLQCRRAFKSFDIECEMMKSIR 344
+F+ ++ KG FGSV +A+L G ++VAVK+ ++ + F E MK
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 345 HQNLIKVISSCSNEEFKA------LVLEYMPHGSLEKYLYSSNCILDIFQ-----RLNIM 393
H ++ K++ K ++L +M HG L +L +S + F + M
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 394 IDVASALEYL 403
+D+A +EYL
Sbjct: 144 VDIACGMEYL 153
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKA----RLGDGMEVAVKVFNLQCRRAFKS-FDIECEMMKSIRHQNLI 349
N ++ +G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
K+I EE +++E P+G L YL + L + + + + A+ YL
Sbjct: 77 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKA----RLGDGMEVAVKVFNLQCRRAFKS-FDIECEMMKSIRHQNLI 349
N ++ +G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
K+I EE +++E P+G L YL + L + + + + A+ YL
Sbjct: 89 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K + ++F E ++MK +RH+ L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 358 EEFKALVLEYMPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L + L + Q +++ +AS + Y+
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ G FG V + +VA+K+ + + F E ++M ++ H+ L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ EYM +G L YL Q L + DV A+EYL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 137
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ G FG V + +VA+K+ + + F E ++M ++ H+ L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ EYM +G L YL Q L + DV A+EYL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 137
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
I G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ LV E+M HG L YL + + L + +DV + YL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
I G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ LV E+M HG L YL + + L + +DV + YL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 12/133 (9%)
Query: 283 LELCRATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKS 332
L C+ F E +L + KG FGSV R LGD G VAVK +
Sbjct: 11 LYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 70
Query: 333 FDIECEMMKSIRHQNLIKV--ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 390
F E +++K++ ++K +S + LV+EY+P G L +L LD + L
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 130
Query: 391 NIMIDVASALEYL 403
+ +EYL
Sbjct: 131 LYSSQICKGMEYL 143
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 286 CRATYKFSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDI 335
C+ F E +L + KG FGSV R LGD G VAVK + F
Sbjct: 1 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 336 ECEMMKSIRHQNLIKV--ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 393
E +++K++ ++K +S + LV+EY+P G L +L LD + L
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 394 IDVASALEYL 403
+ +EYL
Sbjct: 121 SQICKGMEYL 130
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
I G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ LV E+M HG L YL + + L + +DV + YL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 123
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK IRH+ L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
I G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ LV E+M HG L YL + + L + +DV + YL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKA----RLGDGMEVAVKVFNLQCRRAFKS-FDIECEMMKSIRHQNLI 349
N ++ +G FG VY+ G+ + VAVK C K F E +MK++ H +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
K+I EE +++E P+G L YL + L + + + + A+ YL
Sbjct: 73 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 295 NNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISS 354
++ +G FG V KA+ +VA+K + R K+F +E + + H N++K+ +
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCI--LDIFQRLNIMIDVASALEYLH 404
C N LV+EY GSL L+ + + ++ + + + YLH
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
I G FG V+ + +VA+K + + F E E+M + H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ LV E+M HG L YL + + L + +DV + YL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 140
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V+EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V+EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 281 SYLELCRATYKFSEN---------NLISKGGFGSVYKARL----GDGMEVAVKVFNLQ-C 326
+Y E RA F+ +I G G V RL + VA+K
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 327 RRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 386
R + F E +M H N+I++ + +V EYM +GSL+ +L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 387 FQRLNIMIDVASALEYL 403
Q + ++ V + + YL
Sbjct: 151 MQLVGMLRGVGAGMRYL 167
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 295 NNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISS 354
++ +G FG V KA+ +VA+K + R K+F +E + + H N++K+ +
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCI--LDIFQRLNIMIDVASALEYLH 404
C N LV+EY GSL L+ + + ++ + + + YLH
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 358 EEFKALVLEYMPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L + L + Q +++ +AS + Y+
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ G FG V + +VA+K+ + + F E ++M ++ H+ L+++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ EYM +G L YL Q L + DV A+EYL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 128
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V E M +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 358 EEFKALVLEYMPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L + L + Q +++ +AS + Y+
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 358 EEFKALVLEYMPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L + L + Q +++ +AS + Y+
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 301 GGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEF 360
G FG V + +VA+K+ + + F E ++M ++ H+ L+++ C+ +
Sbjct: 20 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 78
Query: 361 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
++ EYM +G L YL Q L + DV A+EYL
Sbjct: 79 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 122
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 281 SYLELCRATYKFSEN---------NLISKGGFGSVYKARL----GDGMEVAVKVFNL-QC 326
+Y E RA F+ +I G G V RL + VA+K
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 327 RRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 386
R + F E +M H N+I++ + +V EYM +GSL+ +L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 387 FQRLNIMIDVASALEYL 403
Q + ++ V + + YL
Sbjct: 151 MQLVGMLRGVGAGMRYL 167
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 167
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
I G FG V+ + +VA+K + + + F E E+M + H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ LV E+M HG L YL + + L + +DV + YL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 121
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 301 GGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEF 360
G FG V + +VA+K+ + + F E ++M ++ H+ L+++ C+ +
Sbjct: 20 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 78
Query: 361 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
++ EYM +G L YL Q L + DV A+EYL
Sbjct: 79 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 122
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V E M +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 301 GGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEF 360
G FG V + +VA+K+ + + F E ++M ++ H+ L+++ C+ +
Sbjct: 19 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 77
Query: 361 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
++ EYM +G L YL Q L + DV A+EYL
Sbjct: 78 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 121
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 168
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 301 GGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEF 360
G FG V + +VA+K+ + + F E ++M ++ H+ L+++ C+ +
Sbjct: 15 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 73
Query: 361 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
++ EYM +G L YL Q L + DV A+EYL
Sbjct: 74 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 147
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 141
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLI 349
+ ++ G FG V RL E++V + L+ + + F E +M H N+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ + + +V E M +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K + ++F E ++MK +RH+ L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 298
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 146
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 301 GGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEF 360
G FG V+ + +VAVK + ++F E +MK+++H L+++ + + EE
Sbjct: 24 GQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEP 82
Query: 361 KALVLEYMPHGSLEKYLYSSN 381
++ EYM GSL +L S
Sbjct: 83 IYIITEYMAKGSLLDFLKSDE 103
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN---LQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
I KG F V AR + G EVAVK+ + L K F E +MK + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E+ LV+EY G + YL + + + R + SA++Y H
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCH 123
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA ++YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQC-------RRAFKSFDIECEMMKSI 343
F NL+ KG F VY+A + G+EVA+K+ + + +R I C++
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL---- 68
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
+H +++++ + + + LVLE +G + +YL + + + M + + + YL
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 404 H 404
H
Sbjct: 129 H 129
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 292 FSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIECEMMK 341
F E +L + KG FGSV R LGD G VAVK + F E +++K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 342 SIRHQNLIKV--ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 399
++ ++K +S + LV+EY+P G L +L LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 400 LEYL 403
+EYL
Sbjct: 128 MEYL 131
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 358 EEFKALVLEYMPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L + L + Q +++ +AS + Y+
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 264 RLSNDANMPIVATWRMFSYLELCRATYKFSENNL-----ISKGGFGSVY--------KAR 310
RLS+ A+ P++A + E ++F + L + +G FG V K +
Sbjct: 52 RLSSTADTPMLAGVSEYELPE--DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDK 109
Query: 311 LGDGMEVAVKVF-NLQCRRAFKSFDIECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYM 368
+ + VAVK+ + + E EMMK I +H+N+I ++ +C+ + +++EY
Sbjct: 110 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 369 PHGSLEKYLYS 379
G+L +YL +
Sbjct: 170 SKGNLREYLRA 180
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 358 EEFKALVLEYMPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L + L + Q +++ +AS + Y+
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 358 EEFKALVLEYMPHGSLEKYLY-SSNCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L + L + Q +++ +AS + Y+
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L L + Q +++ +AS + Y+
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 292 FSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
++ +I G FG V++A+L + EVA+K LQ +R FK+ E ++M+ ++H N++ +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKR-FKNR--ELQIMRIVKHPNVVDL 97
Query: 352 IS------SCSNEEFKALVLEYMPH 370
+ +E F LVLEY+P
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPE 122
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN---LQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
I KG F V AR + G EVAVK+ + L K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E+ LV+EY G + YL + + + R + SA++Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 281 SYLELCRATYKFSEN---------NLISKGGFGSVYKARLG--DGMEVAVKVFNLQC--- 326
+Y + RA ++F++ +I G FG V RL +VAV + L+
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 327 RRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 386
+ + F E +M H N++ + + + +V+E+M +G+L+ +L + +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 387 FQRLNIMIDVASALEYL 403
Q + ++ +A+ + YL
Sbjct: 145 IQLVGMLRGIAAGMRYL 161
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN---LQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
I KG F V AR + G EVAVK+ + L K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E+ LV+EY G + YL + + + R + SA++Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN---LQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
I KG F V AR + G EVAVK+ + L K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E+ LV+EY G + YL + + + R + SA++Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 16/119 (13%)
Query: 288 ATYKFSEN----NLISKGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMM 340
A+ KFS+N + KG F V + G+E A K+ N + R F+ + E +
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRL 390
+ ++H N++++ S E F LV + + G L + YS S+CI I + +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 141
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 165 GAIPASXXXXXXXXXXXXSFNKLEGEIPRGGSFGNFSAESFEGNELLCGSP 215
G +P SFN L GEIP+GG+ F ++ N+ LCGSP
Sbjct: 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 119 IPIEIGGLPNLEYLFL-GYNRLQGSIPDSFGDLIXXXXXXXXXXXXXGAIPASXXXXXXX 177
IP + LP L +L++ G N L G IP + L GAIP
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 178 XXXXXSFNKLEGEIPRG-GSFGNFSAESFEGNELLCGSPN 216
S+N L G +P S N +F+GN + P+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
Query: 108 LKDILYLNF----------SVIPIEIGGLPNLEYLFLGYNRLQGSIPDSFGDLIXXXXXX 157
L ++ YLNF IP I L L YL++ + + G+IPD +
Sbjct: 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131
Query: 158 XXXXXXXGAIPASXXXXXXXXXXXXSFNKLEGEIPRGGSFGNFS 201
G +P S N++ G IP S+G+FS
Sbjct: 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD--SYGSFS 173
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 100 SIPLTFWNLKDILYLNFS------VIPIEIGGLPNLEYLFLGYNRLQGSIPDSFG 148
+IP +K ++ L+FS +P I LPNL + NR+ G+IPDS+G
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG 170
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 295 NNLISKGGFGSVYKARL-GDGME---VAVKV----FNLQCRRAFKSFDIECEMMKSIRHQ 346
+I G FG V + RL G + VA+K + + RR F S E +M H
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS---EASIMGQFEHP 77
Query: 347 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
N+I++ +N ++ E+M +G+L+ +L ++ + Q + ++ +AS + YL
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA +++L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 295 NNLISKGGFGSVYKARL-GDGME---VAVKV----FNLQCRRAFKSFDIECEMMKSIRHQ 346
+I G FG V + RL G + VA+K + + RR F S E +M H
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS---EASIMGQFEHP 75
Query: 347 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
N+I++ +N ++ E+M +G+L+ +L ++ + Q + ++ +AS + YL
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V+EYM G L +L L + Q +++ +AS + Y+
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA +++L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA +++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA +++L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 154
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R + K + + G FG V+ + +VAVK + ++F E +MK++
Sbjct: 8 EIPRESIKLVKK--LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTL 64
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN 381
+H L+++ + + EE ++ E+M GSL +L S
Sbjct: 65 QHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDE 102
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 292 FSENNL-----ISKGGFGSVYKAR---LGD--GMEVAVKVFNLQCRRAFKSFDIECEMMK 341
F E +L + KG FGSV R LGD G VAVK + F E +++K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 342 SIRHQNLIKV--ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 399
++ ++K +S LV+EY+P G L +L LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 400 LEYL 403
+EYL
Sbjct: 124 MEYL 127
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN------LQCRRAFKSFDIECEMMKSIRHQNLIK 350
I KG F V AR + G EVAVK+ + ++ F+ E +MK + H N++K
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVK 78
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ E+ LV+EY G + YL + + + R + SA++Y H
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 131
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA +++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA +++L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKVF---NLQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV L+ E E+ +RH N++++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + L+LE+ P G L K L + D + M ++A AL Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH 132
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKVF---NLQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV L+ E E+ +RH N++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + L+LE+ P G L K L + D + M ++A AL Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH 131
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G + K L D + + ++A+AL Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYCH 130
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G + K L D + + ++A+AL Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYCH 130
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKVF---NLQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV L+ E E+ +RH N++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + L+LE+ P G L K L + D + M ++A AL Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH 131
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVA---VKVFNLQCRRAFKSFDIECEMMKSIRHQN 347
F I +G F VY+A L DG+ VA V++F+L +A E +++K + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLE---KYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+IK +S + +VLE G L K+ ++ + + SALE++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 302 GFGSVYKARLGD----GMEVAVKVFNLQCRRAFKSFDI------ECEMMKSIRHQNLIKV 351
G G+ K ++G+ G +VAVK+ N R+ +S D+ E + +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
S +V+EY+ G L Y+ + ++ R + + SA++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH 128
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 302 GFGSVYKARLGD----GMEVAVKVFNLQCRRAFKSFDI------ECEMMKSIRHQNLIKV 351
G G+ K ++G+ G +VAVK+ N R+ +S D+ E + +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
S +V+EY+ G L Y+ + ++ R + + SA++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH 128
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARL----GDGMEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
N +I +G FG VY L G + AVK N + F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 350 KVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
++ C E LV L YM HG L ++ + + + + VA +++L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 147
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN---LQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
I KG F V AR + G EVAV++ + L K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E+ LV+EY G + YL + + + R + SA++Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN---LQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
I KG F V AR + G EVAV++ + L K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E+ LV+EY G + YL + + + R + SA++Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH 130
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLI 349
K++ I +G G+VY A + G EVA++ NLQ + + E +M+ ++ N++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ S + +V+EY+ GSL + + C +D Q + + ALE+LH
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC-MDEGQIAAVCRECLQALEFLH 134
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLI 349
K++ I +G G+VY A + G EVA++ NLQ + + E +M+ ++ N++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ S + +V+EY+ GSL + + C +D Q + + ALE+LH
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC-MDEGQIAAVCRECLQALEFLH 133
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 278 RMFSYLELCRATYKFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIE 336
++ S + + K++ I +G G+VY A + G EVA++ NLQ + + E
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDV 396
+M+ ++ N++ + S + +V+EY+ GSL + + C +D Q + +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC-MDEGQIAAVCREC 125
Query: 397 ASALEYLH 404
ALE+LH
Sbjct: 126 LQALEFLH 133
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 291 KFSENNL-----ISKGGFGSVYKARLGDGME------VAVKVFNLQCRRAFKS-FDIECE 338
++ NN+ I +G FG V++AR + VAVK+ + ++ F E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 339 MMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+M + N++K++ C+ + L+ EYM +G L ++L S
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS 143
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLI 349
K++ I +G G+VY A + G EVA++ NLQ + + E +M+ ++ N++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ S + +V+EY+ GSL + + C +D Q + + ALE+LH
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC-MDEGQIAAVCRECLQALEFLH 133
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLI 349
K++ I +G G+VY A + G EVA++ NLQ + + E +M+ ++ N++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ S + +V+EY+ GSL + + C +D Q + + ALE+LH
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTD-VVTETC-MDEGQIAAVCRECLQALEFLH 134
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 281 SYLELCRATYKFSEN---------NLISKGGFGSVYKARLG----DGMEVAVKVFNL-QC 326
+Y + +A ++F++ +I G FG V RL + VA+K +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 327 RRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 386
+ + F E +M H N+I + + + +V EYM +GSL+ +L ++ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 387 FQRLNIMIDVASALEYL 403
Q + ++ +++ ++YL
Sbjct: 124 IQLVGMLRGISAGMKYL 140
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ +G FG V+ VA+K ++F E ++MK +RH+ L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 358 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLH 404
E +V EYM G L +L L + Q +++ +AS + Y+
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 291 KFSENNLISKGGFGSVYKARLGD-GMEVAVKVF-NLQCRRAFKSFDI-ECEMMKSIRHQN 347
K+ L+ +G +G V K R D G VA+K F + K + E +++K +RH+N
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLE 374
L+ ++ C ++ LV E++ H L+
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILD 112
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + + A+KV F Q +A + E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 125
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 82
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 141
Query: 402 YLH 404
Y+H
Sbjct: 142 YIH 144
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ G FG V + +VAVK+ + + F E + M + H L+K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
E +V EY+ +G L YL S L+ Q L + DV + +L
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 291 KFSEN----NLISKGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSI 343
KFS+N + KG F V + G+E A K+ N + R F+ + E + + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRL 390
+H N++++ S E F LV + + G L + YS S+CI I + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 290 YKFSENNLISKGGFGSVYK-ARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNL 348
Y S+ ++ G FG V+K G+++A K+ + + + E +M + H NL
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 349 IKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
I++ + ++ LV+EY+ G L + + L + M + + ++H
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 156
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 215
Query: 402 YLH 404
Y+H
Sbjct: 216 YIH 218
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 78
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 137
Query: 402 YLH 404
Y+H
Sbjct: 138 YIH 140
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 128
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 111
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 402 YLH 404
Y+H
Sbjct: 171 YIH 173
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 115
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 174
Query: 402 YLH 404
Y+H
Sbjct: 175 YIH 177
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 113
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 172
Query: 402 YLH 404
Y+H
Sbjct: 173 YIH 175
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 402 YLH 404
Y+H
Sbjct: 137 YIH 139
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 105
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 164
Query: 402 YLH 404
Y+H
Sbjct: 165 YIH 167
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 402 YLH 404
Y+H
Sbjct: 137 YIH 139
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 402 YLH 404
Y+H
Sbjct: 137 YIH 139
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 89
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 402 YLH 404
Y+H
Sbjct: 149 YIH 151
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 81
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 140
Query: 402 YLH 404
Y+H
Sbjct: 141 YIH 143
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 96
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 155
Query: 402 YLH 404
Y+H
Sbjct: 156 YIH 158
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 291 KFSEN----NLISKGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSI 343
KFS+N + KG F V + G+E A K+ N + R F+ + E + + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRL 390
+H N++++ S E F LV + + G L + YS S+CI I + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 85
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 144
Query: 402 YLH 404
Y+H
Sbjct: 145 YIH 147
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 90
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 149
Query: 402 YLH 404
Y+H
Sbjct: 150 YIH 152
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 129
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 128
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCH 129
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 111
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 402 YLH 404
Y+H
Sbjct: 171 YIH 173
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 291 KFSEN----NLISKGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSI 343
KFS+N + KG F V + G+E A K+ N + R F+ + E + + +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRL 390
+H N++++ S E F LV + + G L + YS S+CI I + +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 117
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 89
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 402 YLH 404
Y+H
Sbjct: 149 YIH 151
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 124
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 125
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 125
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCH 129
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 125
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 126
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 302 GFGSVYKARLGD----GMEVAVKVFNLQCRRAFKSFDI------ECEMMKSIRHQNLIKV 351
G G+ K ++G G +VAVK+ N R+ +S D+ E + +K RH ++IK+
Sbjct: 25 GVGTFGKVKVGKHELTGHKVAVKILN---RQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
S +V+EY+ G L Y+ N LD + + + S ++Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCH 133
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 292 FSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
+++ +I G FG VY+A+L D E+ V + + +AFK + E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFK--NRELQIMRKLDHCNIVRL 78
Query: 352 I------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 402
+E + LVL+Y+P + Y + + I+ +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 403 LH 404
+H
Sbjct: 138 IH 139
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 125
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 128
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN------LQCRRAFKSFDIECEMMKSIRHQNLIK 350
I KG F V AR + G EVA+K+ + ++ F+ E +MK + H N++K
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVK 75
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ E+ L++EY G + YL + + + R + SA++Y H
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH 128
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +AFK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQG-KAFK--NRELQIMRKLDHCNIVR 77
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 402 YLH 404
Y+H
Sbjct: 137 YIH 139
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 127
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSN 357
+ G FG V+ +VA+K +SF E ++MK ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 358 EEFKALVLEYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLH 404
E +V EYM GSL +L L + +++ VA+ + Y+
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 125
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 128
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 125
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +AFK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQG-KAFK--NRELQIMRKLDHCNIVR 77
Query: 351 VI------SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ +E + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 402 YLH 404
Y+H
Sbjct: 137 YIH 139
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN------LQCRRAFKSFDIECEMMKSIRHQNLIK 350
I KG F V AR + G EVA+K+ + ++ F+ E +MK + H N++K
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVK 78
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ E+ L++EY G + YL + + + R + SA++Y H
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH 131
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 122
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 130
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 128
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 130
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 125
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 151
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 130
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 126
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 126
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 127
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 128
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 142
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 298 ISKGGFGSVYKARLGDGMEV-AVKV-FNLQCRRAFKSFDI--ECEMMKSIRHQNLIKVIS 353
+ KG FG+VY AR + A+KV F Q +A + E E+ +RH N++++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ L+LEY P G++ + L D + + ++A+AL Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH 151
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R + K + + G FG V+ A +VAVK + ++F E +MK++
Sbjct: 11 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTL 67
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN 381
+H L+K+ + + E ++ E+M GSL +L S
Sbjct: 68 QHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDE 104
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 312 GDGMEVAVKVFNLQCRRAFKS-FDIECEMMKSIRHQNLIKVISSCSNEEFKAL--VLEYM 368
G G VAVK +S + E ++++++ H+++IK C + +L V+EY+
Sbjct: 58 GTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 369 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
P GSL YL + + + Q L + + YLH
Sbjct: 118 PLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH 151
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 292 FSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRA-FKSFDIECEMMKSIRHQNLI 349
+ + I GGF V A + G VA+K+ + + E E +K++RHQ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
++ +VLEY P G L Y+ S + + + R+ + + SA+ Y+H
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH 125
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDI-ECEMMKSIRHQNL 348
+F + + G + +VYK G+ VA+K L S I E +MK ++H+N+
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI 65
Query: 349 IKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+++ E LV E+M L+KY+ S
Sbjct: 66 VRLYDVIHTENKLTLVFEFM-DNDLKKYMDS 95
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 15/123 (12%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+++ +I G FG VY+A+L D E VA+K LQ +R FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 351 V----ISSCSNEE--FKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALE 401
+ SS ++ + LVL+Y+P + Y + + I+ +L M + +L
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 402 YLH 404
Y+H
Sbjct: 137 YIH 139
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 290 YKFSENNL-----ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDI 335
++F + L + +G FG V K + + + VAVK+ + +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 336 ECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 291 KFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDI-ECEMMKSIRHQNL 348
K+ + + +G +G VYKA+ G VA+K L S I E ++K + H N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 349 IKVISSCSNEEFKALVLEYM 368
+ +I +E LV E+M
Sbjct: 82 VSLIDVIHSERCLTLVFEFM 101
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 291 KFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDI-ECEMMKSIRHQNL 348
K+ + + +G +G VYKA+ G VA+K L S I E ++K + H N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 349 IKVISSCSNEEFKALVLEYM 368
+ +I +E LV E+M
Sbjct: 82 VSLIDVIHSERCLTLVFEFM 101
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 290 YKFSENNL-----ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDI 335
++F + L + +G FG V K + + + VAVK+ + +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 336 ECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 298 ISKGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCS 356
+ G FG VYKA+ + G A KV + + + +E E++ + H ++K++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 357 NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
++ +++E+ P G+++ + + L Q + + AL +LH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 254 LILRYRQRGKRLSNDANMPIVAT-----WRMFSYLELCRATYKFSENNLISKGGFGSVYK 308
L+ Y++ L ++P +++ W ++ E+ R + K + + G FG V+
Sbjct: 150 LVDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAW-EIPRESLKLEKK--LGAGQFGEVWM 206
Query: 309 ARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYM 368
A +VAVK + ++F E +MK+++H L+K+ + + E ++ E+M
Sbjct: 207 ATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFM 264
Query: 369 PHGSLEKYLYSSN 381
GSL +L S
Sbjct: 265 AKGSLLDFLKSDE 277
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
E+ R + K + + G FG V+ A +VAVK + ++F E +MK++
Sbjct: 178 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTL 234
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN 381
+H L+K+ + + E ++ E+M GSL +L S
Sbjct: 235 QHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDE 271
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 290 YKFSENNL-----ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDI 335
++F + L + +G FG V K + + + VAVK+ + +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 336 ECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 290 YKFSENNL-----ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDI 335
++F + L + +G FG V K + + + VAVK+ + +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 336 ECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 90 EMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + + + VAVK+ + + E EMMK I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 YKFSENNL-----ISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
++F NNL + G FG V +A G G E AV ++ ++ D + +M +
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 100
Query: 344 R-------HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDV 396
+ H+N++ ++ +C++ ++ EY +G L +L + +L+ I
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 397 ASALEYLHF 405
AS + LHF
Sbjct: 161 ASTRDLLHF 169
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 290 YKFSENNL-----ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDI 335
++F + L + +G FG V K + + + VAVK+ + +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 336 ECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 90 EMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQC------RRAFKSFDIECEMMKSIRHQ 346
+I G FG V RL E+ V + L+ RR F S E +M H
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EASIMGQFDHP 90
Query: 347 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
N+I + + + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 298 ISKGGFGSVYKARLGD-GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCS 356
+ G FG VYKA+ + G A KV + + + +E E++ + H ++K++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 357 NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
++ +++E+ P G+++ + + L Q + + AL +LH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 298 ISKGGFGSVYKA-RLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSIRHQNLIKVISS 354
+ KG F V + ++ G E A K+ N + R + + E + + ++H N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 355 CSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRLN 391
S E F LV + + G L + YS S+CI I + +N
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQC------RRAFKSFDIECEMMKSIRHQ 346
+I G FG V RL E+ V + L+ RR F S E +M H
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EASIMGQFDHP 69
Query: 347 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
N+I + + + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 298 ISKGGFGSVYKA-RLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSIRHQNLIKVISS 354
+ KG F V + ++ G E A K+ N + R + + E + + ++H N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 355 CSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRLN 391
S E F LV + + G L + YS S+CI I + +N
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 297 LISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEM------MKSIRHQNLIK 350
+I KG FG V AR EV V LQ + K + + M +K+++H L+
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ S + VL+Y+ G L +L C L+ R ++ASAL YLH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH 156
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 295 NNLISKGGFGSVYKARLG--DGMEVAVKVFNLQC------RRAFKSFDIECEMMKSIRHQ 346
+I G FG V RL E+ V + L+ RR F S E +M H
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---EASIMGQFDHP 75
Query: 347 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
N+I + + + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ + HQN+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 404 --HF 405
HF
Sbjct: 173 ENHF 176
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ + HQN+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 404 --HF 405
HF
Sbjct: 159 ENHF 162
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 290 YKFSENNLI-----SKGGFGSVYKA-------RLGDGMEVAVKVFNLQCRRA-FKSFDIE 336
++F NL+ +G FG V KA R G VAVK+ + + E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSE 76
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI 383
++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 290 YKFSENNL-----ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDI 335
++F + L + +G FG V K + + + VAVK+ +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVS 89
Query: 336 ECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 283 LELCRATYKFSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFK-----SFDIE 336
L++ ++ + + + +G F +VYKAR + + VA+K L R K + E
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDV 396
++++ + H N+I ++ + ++ +LV ++M LE + ++ +L M+
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 397 ASALEYLH 404
LEYLH
Sbjct: 122 LQGLEYLH 129
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 290 YKFSENNLI-----SKGGFGSVYKA-------RLGDGMEVAVKVFNLQCRRA-FKSFDIE 336
++F NL+ +G FG V KA R G VAVK+ + + E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSE 76
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI 383
++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 290 YKFSENNLI-----SKGGFGSVYKA-------RLGDGMEVAVKVFNLQCRRA-FKSFDIE 336
++F NL+ +G FG V KA R G VAVK+ + + E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSE 76
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI 383
++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 292 FSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
++ N I +G +G V A + G + A K F E E+MKS+ H N+I+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 351 VISSCSNEEFKALVLEYMPHGSL-EKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + + LV+E G L E+ ++ + IM DV SA+ Y H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCH 123
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 292 FSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
++ N I +G +G V A + G + A K F E E+MKS+ H N+I+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 351 VISSCSNEEFKALVLEYMPHGSL-EKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + + LV+E G L E+ ++ + IM DV SA+ Y H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCH 140
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 290 YKFSENNLISKGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSIRHQ 346
Y+ E+ I KG F V + +L G E A K+ N + R + + E + + ++H
Sbjct: 6 YQLYED--IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 347 NLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQ 388
N++++ S S E F LV + + G L + YS S+CI I +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 298 ISKGGFGSVYKAR-LGDGMEVAVKVFN---LQCRRAFKSFDIECEMMKSIRHQNLIKVIS 353
I KG F V AR + G EVAVK+ + L K F E + K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E+ LV EY G + YL + + R + SA++Y H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCH 130
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 296 NLISKGGFGSVYKA--RLGDGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLIK 350
+I G FG V +L E+ V + L+ + + F E +M H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
+ + ++ E+M +GSL+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 151
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 404 --HF 405
HF
Sbjct: 199 ENHF 202
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 291 KFSENNLISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDIECEMMK 341
K + + +G FG V K + + + VAVK+ + + E EMMK
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 87
Query: 342 SI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 88 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 126
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 404 --HF 405
HF
Sbjct: 150 ENHF 153
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 404 --HF 405
HF
Sbjct: 165 ENHF 168
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 291 KFSENNLISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDIECEMMK 341
K + + +G FG V K + + + VAVK+ + + E EMMK
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 82
Query: 342 SI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 83 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 121
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 404 --HF 405
HF
Sbjct: 158 ENHF 161
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 404 --HF 405
HF
Sbjct: 159 ENHF 162
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 404 --HF 405
HF
Sbjct: 159 ENHF 162
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 404 --HF 405
HF
Sbjct: 176 ENHF 179
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 291 KFSENNLISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDIECEMMK 341
K + + +G FG V K + + + VAVK+ + + E EMMK
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 84
Query: 342 SI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
I +H+N+I ++ +C+ + +++EY G+L +YL +
Sbjct: 85 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 123
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 404 --HF 405
HF
Sbjct: 175 ENHF 178
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 296 NLISKGGFGSVYKA--RLGDGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLIK 350
+I G FG V +L E+ V + L+ + + F E +M H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
+ + ++ E+M +GSL+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++S G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 168
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 291 KFSENNLISKGGFGSVYKARLGD-GMEVAVKVF-NLQCRRAFKSFDI-ECEMMKSIRHQN 347
K+ + I +G +G V+K R D G VA+K F + K + E M+K ++H N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 389
L+ ++ + LV EY H L + LD +QR
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHE--------LDRYQR 97
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 22/127 (17%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY---------SSNCILDIFQRLNIMIDVASALE 401
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 402 YL---HF 405
YL HF
Sbjct: 182 YLEENHF 188
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 152
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + +++E M G L+ +L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 404 --HF 405
HF
Sbjct: 173 ENHF 176
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 150
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 296 NLISKGGFGSVYKARL---GDGMEVAVKVFNLQCRRAFKSFDIECEMM---KSIRHQNLI 349
++ G FG+V+K G+ +++ V + ++ + +SF + M S+ H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
+++ C + LV +Y+P GSL ++ L LN + +A + YL
Sbjct: 79 RLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 131
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 149
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVFNLQCRRAFK-SFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK C + F +E ++ HQN+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + +++E M G L+ +L S L + L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 404 --HF 405
HF
Sbjct: 158 ENHF 161
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 124
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 149
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 295 NNLISKGGFGSVYKARLGDG----MEVAVKVFN-LQCRRAFKSFDIECEMMKSIRHQNLI 349
+ +I KG FG VY D ++ A+K + + + ++F E +M+ + H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 350 KVIS-SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
+I E ++L YM HG L +++ S + ++ + VA +EYL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 127
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 149
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 149
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 125
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 147
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 147
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 146
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 146
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 278 RMFSYLELCRATYKFSENNLISKGGFGSVYKARL---GDGMEVAVKVFNLQCRRAFKSFD 334
R+F EL + ++ G FG+V+K G+ +++ V + ++ + +SF
Sbjct: 26 RIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 78
Query: 335 IECEMM---KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 391
+ M S+ H ++++++ C + LV +Y+P GSL ++ L LN
Sbjct: 79 AVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLN 137
Query: 392 IMIDVASALEYL 403
+ +A + YL
Sbjct: 138 WGVQIAKGMYYL 149
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 147
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 150
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 149
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 131
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 112
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 290 YKFSENNL-----ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDI 335
++F + L + +G FG V K + + + VAVK+ + +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 336 ECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
E EMMK I +H+N+I ++ +C+ + +++ Y G+L +YL +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRA 134
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 120
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 119
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 126
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 298 ISKGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIK 350
+ +G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYS 379
++ S + +V+E M HG L+ YL S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 298 ISKGGFGSVY--------KARLGDGMEVAVKVFNLQC-RRAFKSFDIECEMMKSI-RHQN 347
+ +G FG V K + +VAVK+ + E EMMK I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
+I ++ +C+ + +++EY G+L +YL +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQA 116
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 298 ISKGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIK 350
+ +G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYS 379
++ S + +V+E M HG L+ YL S
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 114
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 298 ISKGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIK 350
+ +G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYS 379
++ S + +V+E M HG L+ YL S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 298 ISKGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIK 350
+ +G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYS 379
++ S + +V+E M HG L+ YL S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 290 YKFSENNL-----ISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
++F NNL + G FG V +A G G E AV ++ ++ D + +M +
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 100
Query: 344 R-------HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDV 396
+ H+N++ ++ +C++ ++ EY +G L +L + +L+ I
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 397 ASALEYLHF 405
S + LHF
Sbjct: 161 LSTRDLLHF 169
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 298 ISKGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIK 350
+ +G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYS 379
++ S + +V+E M HG L+ YL S
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 110
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 298 ISKGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIK 350
+ +G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYS 379
++ S + +V+E M HG L+ YL S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 298 ISKGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIK 350
+ +G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYS 379
++ S + +V+E M HG L+ YL S
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++S G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 149
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++S G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 298 ISKGGFGSVYKARLGD------GMEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIK 350
+ +G FG VY+ D VAVK N R F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYS 379
++ S + +V+E M HG L+ YL S
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRS 112
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 290 YKFSENNL-----ISKGGFGSVY--------KARLGDGMEVAVKVF-NLQCRRAFKSFDI 335
++F + L + +G FG V K + + + VAVK+ + +
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 336 ECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
E EMMK I +H+N+I ++ +C+ + +++ Y G+L +YL +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRA 134
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V ++ R +A K E +M S+
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 168
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F +V AR L E A+K+ L+ R K + E ++M + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 154
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKS----FDIECEMMKSIRHQNLIKVI- 352
I +G F +VYK L V V LQ R+ KS F E E +K ++H N+++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 353 ---SSCSNEEFKALVLEYMPHGSLEKYL 377
S+ ++ LV E G+L+ YL
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL 120
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 292 FSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI-----ECEMMKSIRH 345
F ++ +G F + AR L E A+K+ L+ R K + E ++M + H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 346 QNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+K+ + ++E L Y +G L KY+ + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH 147
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 298 ISKGGFGSVYKARLG------DGMEVAVKVF-NLQCRRAFKSFDIECEMMKSIRHQNLIK 350
+ G FG VY+ ++ ++VAVK + + F +E ++ HQN+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL- 403
I + ++LE M G L+ +L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 404 --HF 405
HF
Sbjct: 173 ENHF 176
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 270 NMPIVATWRMFSYLELCRATYKFSENNLISKGGFGSVYKARL-----GDGME-VAVKVFN 323
MP++ + E+ + +F E + + FG VYK L G+ + VA+K
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 324 LQCRRAFKS-FDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYL 377
+ + F E + ++H N++ ++ + ++ +++ Y HG L ++L
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 19/124 (15%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRRAFKSF-DI--ECEMMKSIRHQN 347
FS+ I G FG+VY AR E VA+K + +++ + + DI E ++ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS-------AL 400
I+ E LV+EY L S++ +L++ ++ +++A+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 401 EYLH 404
YLH
Sbjct: 168 AYLH 171
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 286 CRATYKFSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI----ECEMM 340
C K+ + I +G FG V+KAR G +VA+K ++ + + F I E +++
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL 71
Query: 341 KSIRHQNLIKVISSCSNE 358
+ ++H+N++ +I C +
Sbjct: 72 QLLKHENVVNLIEICRTK 89
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 286 CRATYKFSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI----ECEMM 340
C K+ + I +G FG V+KAR G +VA+K ++ + + F I E +++
Sbjct: 13 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL 70
Query: 341 KSIRHQNLIKVISSCSNE 358
+ ++H+N++ +I C +
Sbjct: 71 QLLKHENVVNLIEICRTK 88
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 280 FSYLELC-RATYKFSENNLISKGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDI 335
F + C R T + + KG F V + + E A K+ N + R + +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 336 ECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDI 386
E + + ++H N++++ S S E F LV + + G L + YS S+CI I
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI 139
Query: 387 FQRLN 391
+ +N
Sbjct: 140 LESVN 144
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 286 CRATYKFSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI----ECEMM 340
C K+ + I +G FG V+KAR G +VA+K ++ + + F I E +++
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL 71
Query: 341 KSIRHQNLIKVISSCSNE 358
+ ++H+N++ +I C +
Sbjct: 72 QLLKHENVVNLIEICRTK 89
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE 131
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 139
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 286 CRATYKFSENNLISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDI----ECEMM 340
C K+ + I +G FG V+KAR G +VA+K ++ + + F I E +++
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL 71
Query: 341 KSIRHQNLIKVISSCSNE 358
+ ++H+N++ +I C +
Sbjct: 72 QLLKHENVVNLIEICRTK 89
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 159
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKARL-GDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G G E A K + RR +IE E +++ IRH N+I +
Sbjct: 37 GQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHD 96
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + YLH
Sbjct: 97 IFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLH 146
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKARL-GDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G G E A K + RR +IE E +++ IRH N+I +
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 75
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + YLH
Sbjct: 76 IFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLH 125
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKARL-GDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G G E A K + RR +IE E +++ IRH N+I +
Sbjct: 23 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 82
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + YLH
Sbjct: 83 IFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLH 132
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 403
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 292 FSENNLISKGGFGSVYKARLGDGME-VAVKVFNL---QCRRAFKSFDIECEMMKSIRHQN 347
FS+ I G FG+VY AR E VA+K + Q ++ E ++ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS-------AL 400
I+ E LV+EY L S++ +L++ ++ +++A+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 401 EYLH 404
YLH
Sbjct: 129 AYLH 132
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCR-----RAFKSFDIECEMMKSIR 344
+F + ++ G FG+VYK + +G +V + V + R +A K E +M S+
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 144
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 298 ISKGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDI-ECEMMKSIRHQNLIKVISS 354
+ +G + +VYK ++L D + VA+K L+ I E ++K ++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 355 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E+ LV EY+ L++YL I+++ + + L Y H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 301 GGFGSVYKARLGD-GMEVAVKVFNLQCRR---AFKSFDIECEMMKSIRHQNLIKVISSCS 356
GG +VY A ++VA+K + R K F+ E + HQN++ +I
Sbjct: 22 GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE 81
Query: 357 NEEFKALVLEYMPHGSLEKYLYS 379
++ LV+EY+ +L +Y+ S
Sbjct: 82 EDDCYYLVMEYIEGPTLSEYIES 104
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 84 NLASLRKLSLDSNELTSIPLTFWNLKDILYLNF-----SVIPIEIGGLPNLEYLFLGYNR 138
NL++LR L L N LTS+P + + Y F + +P E G L NL++L + N
Sbjct: 268 NLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNP 327
Query: 139 LQ 140
L+
Sbjct: 328 LE 329
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 86 ASLRKLSLDSNEL-TSIPLTFWNLK-------DILYLNFSVIPIE-IGGLPNLEYLFLGY 136
S+R LSL +++L T+ TF LK D+ Y N +V+ + LP LEY FL Y
Sbjct: 232 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 291
Query: 137 NRLQ 140
N +Q
Sbjct: 292 NNIQ 295
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDI-ECEMMKSIRHQNLIKVISSC 355
I +G +G VYKA+ G A+K L+ S I E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 356 SNEEFKALVLEYM 368
++ LV E++
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDI-ECEMMKSIRHQNLIKVISSC 355
I +G +G VYKA+ G A+K L+ S I E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 356 SNEEFKALVLEYM 368
++ LV E++
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 298 ISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCS 356
+ +G +GSVYKA G VA+K ++ + E +M+ +++K S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 357 NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 405
+V+EY GS+ + N L + I+ LEYLHF
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF 143
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 86 ASLRKLSLDSNEL-TSIPLTFWNLK-------DILYLNFSVIPIE-IGGLPNLEYLFLGY 136
S+R LSL +++L T+ TF LK D+ Y N +V+ + LP LEY FL Y
Sbjct: 227 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 286
Query: 137 NRLQ 140
N +Q
Sbjct: 287 NNIQ 290
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 298 ISKGGFGSVYKARLGDGMEVAVKVFNLQCR-RAFKSFDI-ECEMMKSIRHQNLIKVISSC 355
I +G +G VYKA+ G A+K L+ S I E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 356 SNEEFKALVLEYM 368
++ LV E++
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 15/132 (11%)
Query: 287 RATYKFSENNLISKGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRH 345
R F E ++ +G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 346 Q-------------NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 392
Q N +K +++ + + +EY +G+L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 393 MIDVASALEYLH 404
+ AL Y+H
Sbjct: 122 FRQILEALSYIH 133
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 86 ASLRKLSLDSNEL-TSIPLTFWNLK-------DILYLNFSVIPIE-IGGLPNLEYLFLGY 136
S+R LSL +++L T+ TF LK D+ Y N +V+ + LP LEY FL Y
Sbjct: 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEY 281
Query: 137 NRLQ 140
N +Q
Sbjct: 282 NNIQ 285
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 12/143 (8%)
Query: 249 IVVILLILRYRQRGKRLSN-----DANMPIVATWRMFSYLELCRATYKFSENNLISKGGF 303
+V++L + ++ RL N N + ++ E A K + + + +G F
Sbjct: 1 LVIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSF 60
Query: 304 GSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLIKVISSCS 356
G VY K + D E VA+K N R F E +MK ++++++ S
Sbjct: 61 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 120
Query: 357 NEEFKALVLEYMPHGSLEKYLYS 379
+ +++E M G L+ YL S
Sbjct: 121 QGQPTLVIMELMTRGDLKSYLRS 143
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 291 KFSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRR--AFKSFDIECEMMKSIRHQN 347
K+ + I +G +G+V+KA+ + E VA+K L S E ++K ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 385
++++ +++ LV E+ L+KY S N LD
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLD 99
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 287 RATYKFSENNLISKGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI- 343
R T +F E I G FGSV+K RL DG A+K + ++ E ++ +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVY 62
Query: 344 ------RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMI 394
+H ++++ S+ + ++ + EY GSL + + I+ F+ ++++
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122
Query: 395 DVASALEYLH 404
V L Y+H
Sbjct: 123 QVGRGLRYIH 132
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 291 KFSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQCRR--AFKSFDIECEMMKSIRHQN 347
K+ + I +G +G+V+KA+ + E VA+K L S E ++K ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 385
++++ +++ LV E+ L+KY S N LD
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLD 99
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 287 RATYKFSENNLISKGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI- 343
R T +F E I G FGSV+K RL DG A+K + ++ E ++ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 344 ------RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMI 394
+H ++++ S+ + ++ + EY GSL + + I+ F+ ++++
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 395 DVASALEYLH 404
V L Y+H
Sbjct: 121 QVGRGLRYIH 130
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 287 RATYKFSENNLISKGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI- 343
R T +F E I G FGSV+K RL DG A+K + ++ E ++ +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVY 58
Query: 344 ------RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMI 394
+H ++++ S+ + ++ + EY GSL + + I+ F+ ++++
Sbjct: 59 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 118
Query: 395 DVASALEYLH 404
V L Y+H
Sbjct: 119 QVGRGLRYIH 128
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 336 ECEMMKSIRHQNLIKVISSCSNEEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 393
E ++++ +RH+N+I+++ NEE + +V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 394 IDVASALEYLH 404
+ LEYLH
Sbjct: 116 CQLIDGLEYLH 126
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 287 RATYKFSENNLISKGGFGSVYK--ARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI- 343
R T +F E I G FGSV+K RL DG A+K + ++ E ++ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 344 ------RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMI 394
+H ++++ S+ + ++ + EY GSL + + I+ F+ ++++
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 395 DVASALEYLH 404
V L Y+H
Sbjct: 121 QVGRGLRYIH 130
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 290 YKFSENNLISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIR-HQN 347
YK + + L+ +G + V A L +G E AVK+ Q + E E + + ++N
Sbjct: 14 YKLT-SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKN 72
Query: 348 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
++++I ++ LV E + GS+ ++ + + ++ DVA+AL++LH
Sbjct: 73 ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK-HFNEREASRVVRDVAAALDFLH 128
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 301 GGFGSVY-KARLGDGMEVAVKVFNL-QCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNE 358
G FG V+ G+E +K N + + + + E E++KS+ H N+IK+ +
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY 92
Query: 359 EFKALVLEYMPHGSLEKYLYSSNCILDIFQR---LNIMIDVASALEYLH 404
+V+E G L + + S+ +M + +AL Y H
Sbjct: 93 HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 26/130 (20%)
Query: 287 RATYKFSENNLISKGGFGSVY--KARLGDGMEVAVKVFNLQCRR---AFKSFDIECEM-- 339
R T+ F E ++ G F V+ K RL K+F L+C + AF+ +E E+
Sbjct: 8 RKTFIFME--VLGSGAFSEVFLVKQRLTG------KLFALKCIKKSPAFRDSSLENEIAV 59
Query: 340 MKSIRHQNLIKVISSCSNEEFKALVLEYMPHGS-----LEKYLYSSNCILDIFQRLNIMI 394
+K I+H+N++ + + LV++ + G LE+ +Y+ + Q+
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ----- 114
Query: 395 DVASALEYLH 404
V SA++YLH
Sbjct: 115 -VLSAVKYLH 123
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 106
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 19/107 (17%)
Query: 290 YKFSENNL-----ISKGGFGSVYKA------RLGDGMEVAVKVFNLQC----RRAFKSFD 334
++F NL + G FG V A + G ++VAVK+ + R A S
Sbjct: 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS-- 97
Query: 335 IECEMMKSI-RHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS 380
E +MM + H+N++ ++ +C+ L+ EY +G L YL S
Sbjct: 98 -ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 298 ISKGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSIRHQNLIKVISS 354
+ KG F V + ++ G E A K+ N + R + + E + + ++H N++++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 355 CSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQ 388
S E L+ + + G L + YS S+CI I +
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 132
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 115
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 108
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 114
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 111
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKA-RLGDGMEVAVKV 321
E A Y+ L+ KGGFG+V+ RL D ++VA+KV
Sbjct: 27 EAFEAEYRL--GPLLGKGGFGTVFAGHRLTDRLQVAIKV 63
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 314 GMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSL 373
G +VAVK +L+ ++ + E +M+ H N++ + SS + +V+E++ G+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 374 EKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ ++ ++ Q + + V AL YLH
Sbjct: 130 TDIV--THTRMNEEQIATVCLSVLRALSYLH 158
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 108
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 112
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 115
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 288 ATYKFSENNLISKGGFGSVY----KARLGDGME--VAVKVFNLQCR-RAFKSFDIECEMM 340
A K + + + +G FG VY K + D E VA+K N R F E +M
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 341 KSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 379
K ++++++ S + +++E M G L+ YL S
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 114
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 292 FSENNLISKGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIK 350
F E LI GGFG V+KA+ DG +K +A + E + + + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 351 V------------ISSCSNEEFKA----LVLEYMPHGSLEKYLYSSNC-ILDIFQRLNIM 393
SS ++ K + +E+ G+LE+++ LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 394 IDVASALEYLH 404
+ ++Y+H
Sbjct: 129 EQITKGVDYIH 139
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 296 NLISKGGFGSVYKA-RLGDG----MEVAVKVFNLQCR-RAFKSFDIECEMMKSIRHQNLI 349
++ G FG+VYK + DG + VA+KV +A K E +M + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 350 KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+++ C + LV + MP+G L ++ + L LN + +A + YL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE 136
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 281 SYLELCRATYKFSENNLISKGGFGSVYKARLGDGMEV-AVKVFNLQCRRAFKSFDIE--- 336
S LEL + K+ I +G +G V A + A+K+ N R D+E
Sbjct: 20 SLLELQK---KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIK 76
Query: 337 --CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 394
+MK + H N+ ++ +E++ LV+E + HG + +LN+ I
Sbjct: 77 TEVRLMKKLHHPNIARLYEVYEDEQYICLVME-LCHGG------------HLLDKLNVFI 123
Query: 395 DVASA 399
D ++
Sbjct: 124 DDSTG 128
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 290 YKFSENNL-----ISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
++F NNL + G FG V +A G G E AV ++ ++ D + +M +
Sbjct: 26 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 85
Query: 344 R-------HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYL 377
+ H+N++ ++ +C++ ++ EY +G L +L
Sbjct: 86 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 126
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 284 ELCRATYKFSENNLISKGGFGSVYKARL-----GDGME-VAVKVFNLQCRRAFKS-FDIE 336
E+ + +F E + + FG VYK L G+ + VA+K + + F E
Sbjct: 5 EISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 62
Query: 337 CEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYL 377
+ ++H N++ ++ + ++ +++ Y HG L ++L
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 83 SNLASLRKLSL-DSNELTSI-PLTFWNLKDILYLNFSVIPI-EIG-----GLPNLEYLFL 134
+ LA L +L L D+ +L S+ P TF L + L+ + E+G GL L+YL+L
Sbjct: 76 TGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYL 135
Query: 135 GYNRLQGSIPDSFGDL 150
N LQ D+F DL
Sbjct: 136 QDNALQALPDDTFRDL 151
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 298 ISKGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKVISSCS 356
I +G G V AR G +VAVK+ +L+ ++ + E +M+ +H N++++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 357 NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
E +++E++ G+L + S L+ Q + V AL YLH
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH 158
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 131
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 131
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 81 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 130
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 83 SNLASLRKLSL-DSNELTSI-PLTFWNLKDILYLNFSVIPI-EIG-----GLPNLEYLFL 134
+ LA L +L L D+ +L S+ P TF L + L+ + E+G GL L+YL+L
Sbjct: 77 TGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYL 136
Query: 135 GYNRLQGSIPDSFGDL 150
N LQ D+F DL
Sbjct: 137 QDNALQALPDDTFRDL 152
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 131
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 80
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 81 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 130
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 131
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 131
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 131
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Query: 283 LELCRATY--KFSENNLISKGGFGSVYKARLGD-GMEVAVKVFNLQ-----C---RRAFK 331
L C Y K+S + + G FG V+ A + EV VK + C
Sbjct: 15 LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG 74
Query: 332 SFDIECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGS 372
+E ++ + H N+IKV+ N+ F LV+E HGS
Sbjct: 75 KVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGS 113
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH 131
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH 131
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 290 YKFSENNL-----ISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
++F NNL + G FG V +A G G E AV ++ ++ D + +M +
Sbjct: 33 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 92
Query: 344 R-------HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYL 377
+ H+N++ ++ +C++ ++ EY +G L +L
Sbjct: 93 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH 131
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 131
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 86 ASLRKLSLDSNELTSIP-LTFWNLKD--ILYLN---FSVIPIEI-GGLPNLEYLFLGYNR 138
A +KL L SN+L+S+P F L +LYLN +P I L NLE L++ N+
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96
Query: 139 LQG 141
LQ
Sbjct: 97 LQA 99
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 18/74 (24%)
Query: 76 SISITLGSNLASLRKLSLDSNELTSIPLTFWNLKDILYLNFSVIPIEIGGLPNLEYLFLG 135
++ I + L +L +L LD N+L S+P P L L YL LG
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLP-----------------PRVFDSLTKLTYLSLG 141
Query: 136 YNRLQGSIPDSFGD 149
YN LQ S+P D
Sbjct: 142 YNELQ-SLPKGVFD 154
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 336 ECEMMKSIRHQNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 395
E ++KS+ H N+IK+ ++++ LV E+ G L + + + + D NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQ 154
Query: 396 VASALEYLH 404
+ S + YLH
Sbjct: 155 ILSGICYLH 163
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 287 RATYKFSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQ-CRRAFKSFDIECEMMKSIR 344
R Y+ E +I G V A E VA+K NL+ C+ + E + M
Sbjct: 9 RDDYELQE--VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGS---LEKYLYS----SNCILDIFQRLNIMIDVA 397
H N++ +S ++ LV++ + GS + K++ + + +LD I+ +V
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 398 SALEYLH 404
LEYLH
Sbjct: 127 EGLEYLH 133
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 290 YKFSENNL-----ISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
++F NNL + G FG V +A G G E AV ++ ++ D + +M +
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 100
Query: 344 R-------HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYL 377
+ H+N++ ++ +C++ ++ EY +G L +L
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 290 YKFSENNL-----ISKGGFGSVYKAR-LGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI 343
++F NNL + G FG V +A G G E AV ++ ++ D + +M +
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL 100
Query: 344 R-------HQNLIKVISSCSNEEFKALVLEYMPHGSLEKYL 377
+ H+N++ ++ +C++ ++ EY +G L +L
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 301 GGFGSVYKAR-LGDGMEVAVKVFNLQ----CRRAFKSFDIECE--MMKSIRHQNLIKVIS 353
G F V K R G++ A K + RR DIE E ++K I+H N+I +
Sbjct: 22 GVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 354 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
N+ L+LE + G L +L + + + + + + + YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH 131
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 285 LCRATYKFSENNLISKGGFGSVYKAR--LGDGMEVAVKVFNLQCRRAFKSFDIECEM--- 339
LCRA ++ I +G +G V+KAR G VA+K +Q E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 340 --MKSIRHQNLIKVISSCS 356
+++ H N++++ C+
Sbjct: 66 RHLETFEHPNVVRLFDVCT 84
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 287 RATYKFSENNLISKGGFGSVYKARLGDGME-VAVKVFNLQ-CRRAFKSFDIECEMMKSIR 344
R Y+ E +I G V A E VA+K NL+ C+ + E + M
Sbjct: 14 RDDYELQE--VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 345 HQNLIKVISSCSNEEFKALVLEYMPHGS---LEKYLYS----SNCILDIFQRLNIMIDVA 397
H N++ +S ++ LV++ + GS + K++ + + +LD I+ +V
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 398 SALEYLH 404
LEYLH
Sbjct: 132 EGLEYLH 138
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 285 LCRATYKFSENNLISKGGFGSVYKAR--LGDGMEVAVKVFNLQCRRAFKSFDIECEM--- 339
LCRA ++ I +G +G V+KAR G VA+K +Q E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 340 --MKSIRHQNLIKVISSCS 356
+++ H N++++ C+
Sbjct: 66 RHLETFEHPNVVRLFDVCT 84
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 85 LASLRKLSLDSNELTSIPLTFWN-LKDILYLNFSVIPIEIGGLPN--------LEYLFLG 135
L SL +L L N+L S+P +N L + YLN S ++ LPN L+ L L
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST--NQLQSLPNGVFDKLTQLKELALN 108
Query: 136 YNRLQGSIPDSFGD 149
N+LQ S+PD D
Sbjct: 109 TNQLQ-SLPDGVFD 121
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 285 LCRATYKFSENNLISKGGFGSVYKAR--LGDGMEVAVKVFNLQCRRAFKSFDIECEM--- 339
LCRA ++ I +G +G V+KAR G VA+K +Q E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 340 --MKSIRHQNLIKVISSCS 356
+++ H N++++ C+
Sbjct: 66 RHLETFEHPNVVRLFDVCT 84
>pdb|1UYJ|A Chain A, Clostridium Perfringens Epsilon Toxin Shows Structural
Similarity With The Pore Forming Toxin Aerolysin
pdb|1UYJ|B Chain B, Clostridium Perfringens Epsilon Toxin Shows Structural
Similarity With The Pore Forming Toxin Aerolysin
pdb|1UYJ|C Chain C, Clostridium Perfringens Epsilon Toxin Shows Structural
Similarity With The Pore Forming Toxin Aerolysin
Length = 296
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 28/128 (21%)
Query: 239 IVLPLSTTFMIVVILLILRYRQRGKRLSNDANMPIV-----ATW-RMFSYLELCRATYKF 292
I++P +TT ++ L K+++ N+ +V + W + SYL R YKF
Sbjct: 169 ILVPANTTVEVIAYL---------KKVNVKGNVKLVGQVSGSEWGEIPSYLAFPRDGYKF 219
Query: 293 SENNLISKGGF---GSV-------YKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKS 342
S ++ ++K G++ Y A +GD E+ VKV NL + + I + +
Sbjct: 220 SLSDTVNKSDLNEDGTININGKGNYSAVMGD--ELIVKVRNLNTNNV-QEYVIPVDKKEK 276
Query: 343 IRHQNLIK 350
N++K
Sbjct: 277 SNDSNIVK 284
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 287 RATYKFSENNLISKGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRH 345
R F E ++ +G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 346 Q-------------NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 392
Q N +K +++ + + +EY + +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 393 MIDVASALEYLH 404
+ AL Y+H
Sbjct: 122 FRQILEALSYIH 133
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 287 RATYKFSENNLISKGGFGSVYK-ARLGDGMEVAVKVFNLQ--CRRAFKSFDIECEMMKSI 343
R T ++ + KG F V + ++ G E A + N + R + + E + + +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 344 RHQNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQ 388
+H N++++ S S E L+ + + G L + YS S+CI I +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 121
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 24/125 (19%)
Query: 292 FSENNLISKGGFGSVYKARLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRHQNLIKV 351
F++ I KG FG V+K +V A K D+E + Q I V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVV----------AIKIIDLEEAEDEIEDIQQEITV 74
Query: 352 ISSCSNEEFKA------------LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 399
+S C + +++EY+ GS L + D FQ ++ ++
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKG 132
Query: 400 LEYLH 404
L+YLH
Sbjct: 133 LDYLH 137
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Query: 74 NGSISITLGSNLASLRKLSLDSNELTSIPLTFWNLK--DILYLNFSVI 119
NGS+S L +LR+L LD+N+L+ +P +LK ++YL+ + I
Sbjct: 234 NGSLSF-----LPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNI 276
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Query: 296 NLISKGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLIKV 351
L+ KG FG V R G A+K+ + + E ++++ RH L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + V+EY G L +L + R ++ SALEYLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Query: 296 NLISKGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLIKV 351
L+ KG FG V R G A+K+ + + E ++++ RH L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + V+EY G L +L + R ++ SALEYLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Query: 296 NLISKGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLIKV 351
L+ KG FG V R G A+K+ + + E ++++ RH L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + V+EY G L +L + R ++ SALEYLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 98 LTSIPLTFWNLKDILYLNFSVIPIEIGGLPNLEYLFLGYNRLQGSIPDSF 147
LT + L++ NL D+ +FS LP+L YL L YN +Q P SF
Sbjct: 250 LTQLDLSYNNLHDVGNGSFSY-------LPSLRYLSLEYNNIQRLSPRSF 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Query: 296 NLISKGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLIKV 351
L+ KG FG V R G A+K+ + + E ++++ RH L +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + V+EY G L +L + R ++ SALEYLH
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 125
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 54
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 74
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 54
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Query: 296 NLISKGGFGSVYKAR-LGDGMEVAVKVFNLQ---CRRAFKSFDIECEMMKSIRHQNLIKV 351
L+ KG FG V R G A+K+ + + E ++++ RH L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 352 ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ + V+EY G L +L + R ++ SALEYLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 87
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 39
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 40
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 40
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 55
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 298 ISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI------RHQNLIK 350
+ +G FG V A G +VA+K+ N ++ D++ + + I RH ++IK
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ +++ +V+EY + L Y+ + + + R + SA+EY H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH 124
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 40
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 39
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 38
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 291 KFSENNLISKGGFGSVYKA-RLGDGMEVAVK 320
++ L+ GGFGSVY R+ D + VA+K
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 62
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 298 ISKGGFGSVYKA-RLGDGMEVAVKVFNLQCRRAFKSFDIECEMMKSI------RHQNLIK 350
+ +G FG V A G +VA+K+ N ++ D++ + + I RH ++IK
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 351 VISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 404
+ +++ +V+EY + L Y+ + + + R + SA+EY H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH 129
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 15/132 (11%)
Query: 287 RATYKFSENNLISKGGFGSVYKARLG-DGMEVAVKVFNLQCRRAFKSFDIECEMMKSIRH 345
R F E ++ +G FG V KAR D A+K + E ++ S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 346 Q-------------NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 392
Q N +K ++ + + EY + +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 393 MIDVASALEYLH 404
+ AL Y+H
Sbjct: 122 FRQILEALSYIH 133
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,201,206
Number of Sequences: 62578
Number of extensions: 372837
Number of successful extensions: 1691
Number of sequences better than 100.0: 589
Number of HSP's better than 100.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 408
Number of HSP's that attempted gapping in prelim test: 1296
Number of HSP's gapped (non-prelim): 642
length of query: 405
length of database: 14,973,337
effective HSP length: 101
effective length of query: 304
effective length of database: 8,652,959
effective search space: 2630499536
effective search space used: 2630499536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)