Query 036755
Match_columns 159
No_of_seqs 172 out of 1175
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 08:15:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.5E-30 8.4E-35 215.4 7.1 139 20-158 9-166 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 99.9 5.2E-26 1.8E-30 186.1 10.3 112 47-158 3-128 (312)
3 3on7_A Oxidoreductase, iron/as 99.9 5.5E-24 1.9E-28 172.0 9.5 99 49-158 2-103 (280)
4 1dcs_A Deacetoxycephalosporin 99.9 1.1E-24 3.9E-29 178.2 4.9 103 49-158 3-116 (311)
5 1w9y_A 1-aminocyclopropane-1-c 99.9 8.2E-25 2.8E-29 179.7 3.2 104 49-158 2-111 (319)
6 1odm_A Isopenicillin N synthas 99.9 5.4E-23 1.8E-27 169.5 9.9 103 48-158 6-139 (331)
7 1vm6_A DHPR, dihydrodipicolina 68.4 7.6 0.00026 29.9 4.9 36 63-98 93-128 (228)
8 4f3y_A DHPR, dihydrodipicolina 59.9 14 0.00049 28.8 5.2 39 61-99 111-149 (272)
9 2dbn_A Hypothetical protein YB 58.5 8 0.00027 32.8 3.6 52 47-99 97-151 (461)
10 2opi_A L-fuculose-1-phosphate 57.7 4.5 0.00015 30.3 1.8 33 50-82 125-160 (212)
11 4ay7_A Methylcobalamin\: coenz 56.6 20 0.0007 28.5 5.7 40 60-99 305-348 (348)
12 3ijp_A DHPR, dihydrodipicolina 56.1 22 0.00075 28.1 5.7 39 61-99 126-164 (288)
13 2fk5_A Fuculose-1-phosphate al 54.8 8.1 0.00028 28.7 2.8 34 49-82 116-153 (200)
14 3o2g_A Gamma-butyrobetaine dio 53.2 12 0.00042 30.5 3.9 48 50-100 122-173 (388)
15 1p9l_A Dihydrodipicolinate red 53.0 31 0.0011 26.4 6.0 39 60-98 82-123 (245)
16 1e4c_P L-fuculose 1-phosphate 52.3 6.2 0.00021 29.5 1.8 33 50-82 122-157 (215)
17 1m5a_B Insulin B chain; alpha 52.1 14 0.00048 19.3 2.6 19 59-77 9-27 (30)
18 1pvt_A Sugar-phosphate aldolas 50.8 7.8 0.00027 29.4 2.2 34 49-82 160-196 (238)
19 2v9l_A Rhamnulose-1-phosphate 49.4 7.6 0.00026 30.3 2.0 33 50-82 179-214 (274)
20 1dih_A Dihydrodipicolinate red 48.8 29 0.00099 26.9 5.3 38 61-98 110-147 (273)
21 1otj_A Alpha-ketoglutarate-dep 47.4 21 0.00073 27.3 4.3 47 49-98 16-65 (283)
22 1oih_A Putative alkylsulfatase 42.1 31 0.0011 26.7 4.5 49 48-99 25-77 (301)
23 2irp_A Putative aldolase class 41.7 16 0.00054 27.0 2.6 34 49-82 138-176 (208)
24 3ocr_A Class II aldolase/adduc 38.0 16 0.00056 28.5 2.2 34 49-82 155-192 (273)
25 3m0z_A Putative aldolase; MCSG 37.9 47 0.0016 25.7 4.7 36 60-96 174-210 (249)
26 2z7b_A MLR6791 protein; class 37.5 15 0.0005 28.7 1.9 34 49-82 156-201 (270)
27 2rdq_A 1-deoxypentalenic acid 37.2 52 0.0018 24.9 5.0 36 62-98 21-56 (288)
28 3m6y_A 4-hydroxy-2-oxoglutarat 36.0 50 0.0017 25.9 4.6 36 60-96 197-233 (275)
29 3qy9_A DHPR, dihydrodipicolina 34.9 22 0.00076 27.2 2.5 40 60-99 89-128 (243)
30 4f3y_A DHPR, dihydrodipicolina 34.1 24 0.00081 27.5 2.6 44 53-96 77-121 (272)
31 1v7z_A Creatininase, creatinin 33.9 57 0.0019 25.0 4.8 40 53-92 87-132 (260)
32 4f21_A Carboxylesterase/phosph 33.6 84 0.0029 23.3 5.6 40 60-99 200-245 (246)
33 3ijp_A DHPR, dihydrodipicolina 33.4 29 0.00098 27.4 3.0 44 53-96 92-136 (288)
34 1oi7_A Succinyl-COA synthetase 31.7 1.3E+02 0.0044 23.3 6.6 43 54-96 69-113 (288)
35 3pvj_A Alpha-ketoglutarate-dep 31.0 46 0.0016 25.6 3.8 48 48-98 13-63 (277)
36 3r1j_A Alpha-ketoglutarate-dep 30.3 64 0.0022 25.2 4.6 50 48-100 19-72 (301)
37 2do1_A Nuclear protein HCC-1; 29.9 63 0.0022 19.0 3.4 33 61-96 14-46 (55)
38 2nrk_A Hypothetical protein GR 29.8 15 0.00051 26.7 0.7 35 49-83 49-87 (173)
39 2ivy_A Hypothetical protein SS 29.2 1.2E+02 0.0041 19.8 5.1 46 53-98 8-57 (101)
40 2opw_A Phyhd1 protein; double- 28.8 75 0.0026 24.0 4.7 36 63-99 6-41 (291)
41 2j01_J 50S ribosomal protein L 28.6 1.3E+02 0.0044 21.5 5.7 37 60-96 8-46 (173)
42 3exc_X Uncharacterized protein 27.9 65 0.0022 20.7 3.6 48 51-98 7-58 (91)
43 3no4_A Creatininase, creatinin 27.7 84 0.0029 24.4 4.8 43 53-95 96-144 (267)
44 2yv2_A Succinyl-COA synthetase 27.2 1.6E+02 0.0054 22.9 6.4 43 54-96 76-120 (297)
45 1zav_A 50S ribosomal protein L 27.0 1.2E+02 0.0043 21.7 5.4 37 60-96 10-47 (180)
46 2a1x_A Phytanoyl-COA dioxygena 26.3 70 0.0024 24.5 4.1 35 64-99 26-60 (308)
47 2yv1_A Succinyl-COA ligase [AD 26.2 1.8E+02 0.0063 22.4 6.6 42 55-96 76-119 (294)
48 3m4r_A Uncharacterized protein 25.4 24 0.00081 26.6 1.2 32 51-82 156-190 (222)
49 3rcm_A TATD family hydrolase; 23.2 1.7E+02 0.0058 22.6 5.8 37 61-97 18-54 (287)
50 2nu8_A Succinyl-COA ligase [AD 20.3 2.6E+02 0.0089 21.4 6.4 41 56-96 71-113 (288)
51 3jsy_A Acidic ribosomal protei 20.2 1.9E+02 0.0064 21.5 5.3 35 61-95 8-43 (213)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=99.96 E-value=2.5e-30 Score=215.42 Aligned_cols=139 Identities=22% Similarity=0.388 Sum_probs=115.4
Q ss_pred cccccCCCCCCCCCccCCCCCCCCCC---CC----CCCcceeeCCCh---------HHHHHHHHHHHHcCeEEEeecCCC
Q 036755 20 PLDFKTALKLPDSHAWTLPDHPMADP---LT----HAAVPVIDLGSP---------QAATLIRQACEKWGAFQVTNHGIP 83 (159)
Q Consensus 20 ~l~~~~~~~~p~~~i~~~~~~~~~~~---~~----~~~iPvIDls~~---------~~~~~l~~A~~~~GFF~l~nHGI~ 83 (159)
.|..+++..||+.|++|+.+++.+.. .. ...||||||+.. +++++|++||++||||||+||||+
T Consensus 9 ~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~ 88 (356)
T 1gp6_A 9 SLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIP 88 (356)
T ss_dssp HHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCC
T ss_pred HHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCC
Confidence 67788899999999999887776422 01 246999999862 378999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCCHHHHhhcCCCC--CCCccccCCCccccCCCCCeeeeEeeccCCC-CCcCCCCCCCCCCCC
Q 036755 84 IKLLNQVEFQTRRLFALPANQKLLAGRSP--EDFTGYGLPRISTFFSKLMWTEGFTILGSPL-DHARQLWPHEYDHIN 158 (159)
Q Consensus 84 ~eli~~~~~~s~~FF~LP~eeK~~~~~~~--~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~-~~~~n~WP~~~~~fr 158 (159)
.++++++++.+++||+||.|+|+++.+.. ..++||+........+..||+|+|+++..|. ....|.||+.+++||
T Consensus 89 ~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr 166 (356)
T 1gp6_A 89 ADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYI 166 (356)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhh
Confidence 99999999999999999999999998653 3689999876544456789999999976554 246799999988885
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=99.93 E-value=5.2e-26 Score=186.15 Aligned_cols=112 Identities=16% Similarity=0.210 Sum_probs=93.1
Q ss_pred CCCCcceeeCCCh-----HHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCCccccCC
Q 036755 47 THAAVPVIDLGSP-----QAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFALPANQKLLAGRSPEDFTGYGLP 121 (159)
Q Consensus 47 ~~~~iPvIDls~~-----~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~LP~eeK~~~~~~~~~~~GY~~~ 121 (159)
++.+||||||+.. +++++|++||++||||||+||||++++++++++.+++||+||.|+|+++.+....++||.+.
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 3 STSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp -CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 4678999999852 57899999999999999999999999999999999999999999999997654567999887
Q ss_pred Ccccc--CCCCCeeeeEeeccC-CC------CCcCCCCCCCCCCCC
Q 036755 122 RISTF--FSKLMWTEGFTILGS-PL------DHARQLWPHEYDHIN 158 (159)
Q Consensus 122 ~~~~~--~~~~d~kE~f~~~~~-p~------~~~~n~WP~~~~~fr 158 (159)
+.+.. ....||+|+|+++.. +. ...+|.||+++|+||
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr 128 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFK 128 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHH
Confidence 76543 246899999998642 11 134699999998885
No 3
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=99.90 E-value=5.5e-24 Score=171.96 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=81.6
Q ss_pred CCcceeeCCChHHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCCccccCCC-cccc-
Q 036755 49 AAVPVIDLGSPQAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFALPANQKLLAGRSPEDFTGYGLPR-ISTF- 126 (159)
Q Consensus 49 ~~iPvIDls~~~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~LP~eeK~~~~~~~~~~~GY~~~~-~~~~- 126 (159)
+.||||||+..+.+++|++||++||||||+||||++++++++++.+++||+| |+|+++.+.+..++||++.+ .+..
T Consensus 2 ~~IPvIDls~~~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~ 79 (280)
T 3on7_A 2 MKLETIDYRAADSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAK 79 (280)
T ss_dssp --CCEEETTSTTHHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC------
T ss_pred CCCCEEECCChhHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccC
Confidence 4799999999888999999999999999999999999999999999999997 89999877666789998876 3332
Q ss_pred -CCCCCeeeeEeeccCCCCCcCCCCCCCCCCCC
Q 036755 127 -FSKLMWTEGFTILGSPLDHARQLWPHEYDHIN 158 (159)
Q Consensus 127 -~~~~d~kE~f~~~~~p~~~~~n~WP~~~~~fr 158 (159)
....||+|+|++. .||+.+++||
T Consensus 80 ~~~~~D~kE~~~~~---------p~~~~p~~fr 103 (280)
T 3on7_A 80 GHTVKDIKEYYHVY---------PWGRIPDSLR 103 (280)
T ss_dssp --CCCCSCEEEEEC---------TTSCCCGGGH
T ss_pred CCCcccHHHHHhcC---------CCCCCCHHHH
Confidence 2357999999873 2777777775
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=99.90 E-value=1.1e-24 Score=178.25 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=79.6
Q ss_pred CCcceeeCCCh---HHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhCCC-HHHHhhcCCCC-CCCccccCCCc
Q 036755 49 AAVPVIDLGSP---QAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFALP-ANQKLLAGRSP-EDFTGYGLPRI 123 (159)
Q Consensus 49 ~~iPvIDls~~---~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~LP-~eeK~~~~~~~-~~~~GY~~~~~ 123 (159)
..||||||+.. +..++|++||++||||||+||||+.++++++++.+++||+|| .|+|+++.+.. ..++||+..+.
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~ 82 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLES 82 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC--
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccc
Confidence 47999999752 234599999999999999999999999999999999999999 99999997653 56799998776
Q ss_pred ccc------CCCCCeeeeEeeccCCCCCcCCCCCCCCCCCC
Q 036755 124 STF------FSKLMWTEGFTILGSPLDHARQLWPHEYDHIN 158 (159)
Q Consensus 124 ~~~------~~~~d~kE~f~~~~~p~~~~~n~WP~~~~~fr 158 (159)
+.. .+..||+|+|+++.. +|.|| +|+||
T Consensus 83 e~~~~~~~~~~~~d~~E~~~~~~~-----~n~wP--~~~fr 116 (311)
T 1dcs_A 83 ESTAQITNTGSYSDYSMCYSMGTA-----DNLFP--SGDFE 116 (311)
T ss_dssp ---------------CEEEEECSS-----SCCCS--CHHHH
T ss_pred cccccccCCCCCCCcceeeeccCC-----CCCCC--ChHHH
Confidence 533 357899999998754 68899 66664
No 5
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=99.90 E-value=8.2e-25 Score=179.74 Aligned_cols=104 Identities=22% Similarity=0.415 Sum_probs=86.9
Q ss_pred CCcceeeCCCh------HHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCCccccCCC
Q 036755 49 AAVPVIDLGSP------QAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFALPANQKLLAGRSPEDFTGYGLPR 122 (159)
Q Consensus 49 ~~iPvIDls~~------~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~LP~eeK~~~~~~~~~~~GY~~~~ 122 (159)
..||||||+.. +++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+..+
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~~ 78 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGVQ 78 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCccc
Confidence 47999999852 4789999999999999999999999999999999999999999999997532 35887654
Q ss_pred ccccCCCCCeeeeEeeccCCCCCcCCCCCCCCCCCC
Q 036755 123 ISTFFSKLMWTEGFTILGSPLDHARQLWPHEYDHIN 158 (159)
Q Consensus 123 ~~~~~~~~d~kE~f~~~~~p~~~~~n~WP~~~~~fr 158 (159)
.+ .+..||+|+|++...|. ...|.||+.+++||
T Consensus 79 ~e--~~~~d~ke~~~~~~~p~-~~~~~wP~~~~~fr 111 (319)
T 1w9y_A 79 AE--VTDMDWESTFFLKHLPI-SNISEVPDLDEEYR 111 (319)
T ss_dssp CC--GGGCCCCEEEEEEEESC-CGGGGCTTCCHHHH
T ss_pred cc--CCCCChhhheeeecCCc-ccccccccchhHHH
Confidence 33 25689999999876553 34789999888775
No 6
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=99.88 E-value=5.4e-23 Score=169.53 Aligned_cols=103 Identities=21% Similarity=0.281 Sum_probs=84.3
Q ss_pred CCCcceeeCCCh---------HHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHh-hCCCHHHHhhcCCCCCCCcc
Q 036755 48 HAAVPVIDLGSP---------QAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRL-FALPANQKLLAGRSPEDFTG 117 (159)
Q Consensus 48 ~~~iPvIDls~~---------~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~F-F~LP~eeK~~~~~~~~~~~G 117 (159)
...||||||+.. +++++|++||++||||||+|||| +++++++.+++| |+||.|+|+++.+ +|
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~G 77 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RA 77 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TT
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cC
Confidence 457999999852 37899999999999999999999 999999999999 9999999999975 67
Q ss_pred ccCCCccccC--------CCCCeeeeEeeccCCC-----------CCcCCCCCCC--CCCCC
Q 036755 118 YGLPRISTFF--------SKLMWTEGFTILGSPL-----------DHARQLWPHE--YDHIN 158 (159)
Q Consensus 118 Y~~~~~~~~~--------~~~d~kE~f~~~~~p~-----------~~~~n~WP~~--~~~fr 158 (159)
|.+.+.+... +..||+|+|+++.... ...+|.||+. +|+||
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr 139 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQ 139 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHH
Confidence 7766544321 4679999999875321 1347999998 88875
No 7
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=68.43 E-value=7.6 Score=29.89 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=19.2
Q ss_pred HHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhh
Q 036755 63 TLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLF 98 (159)
Q Consensus 63 ~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF 98 (159)
+.|.+++++.+.++--|-++.-.++.++.+.+.++|
T Consensus 93 ~~l~~~a~~~~vv~apNfSlGvnll~~l~~~aA~~l 128 (228)
T 1vm6_A 93 QMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVL 128 (228)
T ss_dssp HHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCCEEEeccccHHHHHHHHHHHHHHHhc
Confidence 344445555555555555555555555555555555
No 8
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=59.90 E-value=14 Score=28.78 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhC
Q 036755 61 AATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFA 99 (159)
Q Consensus 61 ~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~ 99 (159)
..++|.++|++.+.++.-|-++.-.++.++.+.+.++|.
T Consensus 111 ~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l~ 149 (272)
T 4f3y_A 111 QKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFA 149 (272)
T ss_dssp HHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhcC
Confidence 456788888888888888888887888888887777774
No 9
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=58.51 E-value=8 Score=32.83 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=39.7
Q ss_pred CCCCcceeeCCChH---HHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhC
Q 036755 47 THAAVPVIDLGSPQ---AATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFA 99 (159)
Q Consensus 47 ~~~~iPvIDls~~~---~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~ 99 (159)
+...||.||+++.. +.++.++..++.|++.|.|. |+.+...+..+...+|.+
T Consensus 97 G~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 45789999997642 33677788999999976665 888888887777777763
No 10
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=57.69 E-value=4.5 Score=30.26 Aligned_cols=33 Identities=33% Similarity=0.459 Sum_probs=27.1
Q ss_pred CcceeeCCC---hHHHHHHHHHHHHcCeEEEeecCC
Q 036755 50 AVPVIDLGS---PQAATLIRQACEKWGAFQVTNHGI 82 (159)
Q Consensus 50 ~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nHGI 82 (159)
.||++++.. .++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 689998864 368888988888777888999995
No 11
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=56.56 E-value=20 Score=28.47 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHcCeEEEeecCCC----HHHHHHHHHHHHHhhC
Q 036755 60 QAATLIRQACEKWGAFQVTNHGIP----IKLLNQVEFQTRRLFA 99 (159)
Q Consensus 60 ~~~~~l~~A~~~~GFF~l~nHGI~----~eli~~~~~~s~~FF~ 99 (159)
++.+++++.++.-||..-.+|||+ .|-+..+.+++++|++
T Consensus 305 ~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 305 KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 455667777888888777889975 5789999999999985
No 12
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=56.08 E-value=22 Score=28.07 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhC
Q 036755 61 AATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFA 99 (159)
Q Consensus 61 ~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~ 99 (159)
..++|.++|++.+.++.-|-++.-.++.++.+.+.++|.
T Consensus 126 ~~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l~ 164 (288)
T 3ijp_A 126 EEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALD 164 (288)
T ss_dssp HHHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhcC
Confidence 456788888888888888888888888888887777774
No 13
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=54.76 E-value=8.1 Score=28.65 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=27.4
Q ss_pred CCccee-eCCC---hHHHHHHHHHHHHcCeEEEeecCC
Q 036755 49 AAVPVI-DLGS---PQAATLIRQACEKWGAFQVTNHGI 82 (159)
Q Consensus 49 ~~iPvI-Dls~---~~~~~~l~~A~~~~GFF~l~nHGI 82 (159)
..||++ ++.. .++++.+.+++.+.-.+.|.|||+
T Consensus 116 ~~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 116 KEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp SCEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CCceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 378998 7654 368888999998888889999995
No 14
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=53.16 E-value=12 Score=30.54 Aligned_cols=48 Identities=19% Similarity=0.167 Sum_probs=37.0
Q ss_pred CcceeeCCC----hHHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhCC
Q 036755 50 AVPVIDLGS----PQAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFAL 100 (159)
Q Consensus 50 ~iPvIDls~----~~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~L 100 (159)
++|.||+++ .+...++.+|+.++|++.+.|-.++.+ +..+.+++|=.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 689999865 357889999999999999999988754 344566666443
No 15
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=52.99 E-value=31 Score=26.38 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=27.5
Q ss_pred HHHHHHHHHHH---HcCeEEEeecCCCHHHHHHHHHHHHHhh
Q 036755 60 QAATLIRQACE---KWGAFQVTNHGIPIKLLNQVEFQTRRLF 98 (159)
Q Consensus 60 ~~~~~l~~A~~---~~GFF~l~nHGI~~eli~~~~~~s~~FF 98 (159)
+..++|.++|+ ..+.++.-|-++-..++.++.+.+.++|
T Consensus 82 e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~~ 123 (245)
T 1p9l_A 82 ERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFF 123 (245)
T ss_dssp HHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhhc
Confidence 34566777777 4567777777777777777777777666
No 16
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=52.32 E-value=6.2 Score=29.52 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=26.7
Q ss_pred CcceeeCCC---hHHHHHHHHHHHHcCeEEEeecCC
Q 036755 50 AVPVIDLGS---PQAATLIRQACEKWGAFQVTNHGI 82 (159)
Q Consensus 50 ~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nHGI 82 (159)
.||++++.. .++++.+.+++.+.--+.+.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 688888864 367888888888777888899995
No 17
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=52.13 E-value=14 Score=19.25 Aligned_cols=19 Identities=16% Similarity=0.328 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHHcCeEEE
Q 036755 59 PQAATLIRQACEKWGAFQV 77 (159)
Q Consensus 59 ~~~~~~l~~A~~~~GFF~l 77 (159)
.++++.|.-.|.+-|||+.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 4678888889999999983
No 18
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=50.84 E-value=7.8 Score=29.44 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=27.5
Q ss_pred CCcceeeCCC---hHHHHHHHHHHHHcCeEEEeecCC
Q 036755 49 AAVPVIDLGS---PQAATLIRQACEKWGAFQVTNHGI 82 (159)
Q Consensus 49 ~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nHGI 82 (159)
..||++++.. .++++.+.+++.+.--+.+.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3688998864 367888989888878888999996
No 19
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=49.36 E-value=7.6 Score=30.28 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=27.5
Q ss_pred CcceeeCCC---hHHHHHHHHHHHHcCeEEEeecCC
Q 036755 50 AVPVIDLGS---PQAATLIRQACEKWGAFQVTNHGI 82 (159)
Q Consensus 50 ~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nHGI 82 (159)
.||++++.. .++++.+.+++.+.--+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 688888754 378889999998888889999996
No 20
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=48.83 E-value=29 Score=26.87 Aligned_cols=38 Identities=11% Similarity=0.206 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhh
Q 036755 61 AATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLF 98 (159)
Q Consensus 61 ~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF 98 (159)
..++|.+++++.|.++..|.++--.++.++.+.+.++|
T Consensus 110 ~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~ 147 (273)
T 1dih_A 110 GKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVM 147 (273)
T ss_dssp HHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhc
Confidence 45667777777777777777777677777777777776
No 21
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=47.35 E-value=21 Score=27.30 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=35.2
Q ss_pred CCcceeeCCC---hHHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhh
Q 036755 49 AAVPVIDLGS---PQAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLF 98 (159)
Q Consensus 49 ~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF 98 (159)
.+|+-||++. .+..++|++++.++|++.+.+-.++.+. ..+.+++|=
T Consensus 16 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred EEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 4677778875 3678899999999999999998887653 344555553
No 22
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=42.10 E-value=31 Score=26.71 Aligned_cols=49 Identities=12% Similarity=0.038 Sum_probs=36.5
Q ss_pred CCCcceeeCCC---hHHHHHHHHHHHHcCeEEEeecC-CCHHHHHHHHHHHHHhhC
Q 036755 48 HAAVPVIDLGS---PQAATLIRQACEKWGAFQVTNHG-IPIKLLNQVEFQTRRLFA 99 (159)
Q Consensus 48 ~~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nHG-I~~eli~~~~~~s~~FF~ 99 (159)
..+|+-||++. .+..++|++++.++|++.+.+-. ++. ++..+.++.|=.
T Consensus 25 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 25 GAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp CEEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred ceEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 34577788876 35788999999999999999987 875 445556666543
No 23
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=41.67 E-value=16 Score=26.99 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=25.8
Q ss_pred CCcceeeCCC--hHHHHHHHHHHHHcC---eEEEeecCC
Q 036755 49 AAVPVIDLGS--PQAATLIRQACEKWG---AFQVTNHGI 82 (159)
Q Consensus 49 ~~iPvIDls~--~~~~~~l~~A~~~~G---FF~l~nHGI 82 (159)
..||+++... .++++.+.+++.+.+ -+.+.|||+
T Consensus 138 ~~vp~~~~~~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNEQNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCCSCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCCCCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 3688887742 267888888888765 688899996
No 24
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=38.05 E-value=16 Score=28.47 Aligned_cols=34 Identities=12% Similarity=0.110 Sum_probs=27.7
Q ss_pred CCcceeeCCC----hHHHHHHHHHHHHcCeEEEeecCC
Q 036755 49 AAVPVIDLGS----PQAATLIRQACEKWGAFQVTNHGI 82 (159)
Q Consensus 49 ~~iPvIDls~----~~~~~~l~~A~~~~GFF~l~nHGI 82 (159)
..||++|+.. .++++.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 3688888764 367888999999888999999995
No 25
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=37.92 E-value=47 Score=25.69 Aligned_cols=36 Identities=11% Similarity=0.143 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHcCeEEEeec-CCCHHHHHHHHHHHHH
Q 036755 60 QAATLIRQACEKWGAFQVTNH-GIPIKLLNQVEFQTRR 96 (159)
Q Consensus 60 ~~~~~l~~A~~~~GFF~l~nH-GI~~eli~~~~~~s~~ 96 (159)
+..+.+.+||.+.|| .+--. ||+.+-...+.+.+.+
T Consensus 174 ~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 174 AEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp HHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 678899999999999 65554 6988777776666543
No 26
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=37.47 E-value=15 Score=28.66 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=26.9
Q ss_pred CCcceeeCC------------ChHHHHHHHHHHHHcCeEEEeecCC
Q 036755 49 AAVPVIDLG------------SPQAATLIRQACEKWGAFQVTNHGI 82 (159)
Q Consensus 49 ~~iPvIDls------------~~~~~~~l~~A~~~~GFF~l~nHGI 82 (159)
..||++++. ..++++.+.+++.+.--+.|.|||+
T Consensus 156 ~~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 156 ESVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp SCCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 368998852 2378888999998877888999995
No 27
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=37.18 E-value=52 Score=24.90 Aligned_cols=36 Identities=19% Similarity=0.196 Sum_probs=29.6
Q ss_pred HHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhh
Q 036755 62 ATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLF 98 (159)
Q Consensus 62 ~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF 98 (159)
.+++++.+++.||+.|.|- ++.+.++++.+...+..
T Consensus 21 ~~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~ 56 (288)
T 2rdq_A 21 RAALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGL 56 (288)
T ss_dssp HHHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 4568889999999988764 78899999888888765
No 28
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=35.99 E-value=50 Score=25.88 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHcCeEEEeec-CCCHHHHHHHHHHHHH
Q 036755 60 QAATLIRQACEKWGAFQVTNH-GIPIKLLNQVEFQTRR 96 (159)
Q Consensus 60 ~~~~~l~~A~~~~GFF~l~nH-GI~~eli~~~~~~s~~ 96 (159)
+..+.+.+||.+.|| .+--. ||+.+-...+.+.+.+
T Consensus 197 eEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l~ 233 (275)
T 3m6y_A 197 EEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIALE 233 (275)
T ss_dssp HHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHHH
Confidence 678899999999999 55554 6988777777666643
No 29
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=34.85 E-value=22 Score=27.18 Aligned_cols=40 Identities=10% Similarity=0.126 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhC
Q 036755 60 QAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFA 99 (159)
Q Consensus 60 ~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~ 99 (159)
+..++|.++|++.+.++.-|.++.-.++.++.+.+.++|.
T Consensus 89 e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 89 KLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 4578899999999999999999999999999888888874
No 30
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=34.14 E-value=24 Score=27.52 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=36.7
Q ss_pred eeeCCChHHHHHHHHHHHHcCeEEEe-ecCCCHHHHHHHHHHHHH
Q 036755 53 VIDLGSPQAATLIRQACEKWGAFQVT-NHGIPIKLLNQVEFQTRR 96 (159)
Q Consensus 53 vIDls~~~~~~~l~~A~~~~GFF~l~-nHGI~~eli~~~~~~s~~ 96 (159)
+||++.++...++...|.+.|-=.|+ +.|.+++..+++.+++++
T Consensus 77 VIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~ 121 (272)
T 4f3y_A 77 LIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEK 121 (272)
T ss_dssp EEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTT
T ss_pred EEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 68999988888889999999986666 679999888888887764
No 31
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=33.86 E-value=57 Score=24.99 Aligned_cols=40 Identities=13% Similarity=0.027 Sum_probs=28.7
Q ss_pred eeeCCCh---HHHHHHHHHHHHcCe---EEEeecCCCHHHHHHHHH
Q 036755 53 VIDLGSP---QAATLIRQACEKWGA---FQVTNHGIPIKLLNQVEF 92 (159)
Q Consensus 53 vIDls~~---~~~~~l~~A~~~~GF---F~l~nHGI~~eli~~~~~ 92 (159)
+|.|+.. +++.++.+.+.+.|| +.|-+||=....++.+.+
T Consensus 87 Tisl~~~tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~ 132 (260)
T 1v7z_A 87 TTSLDGATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGID 132 (260)
T ss_dssp CBCBCHHHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHH
T ss_pred eEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHH
Confidence 5566542 678889999999995 556669977766666554
No 32
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=33.59 E-value=84 Score=23.34 Aligned_cols=40 Identities=8% Similarity=0.140 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHcCe---EEE---eecCCCHHHHHHHHHHHHHhhC
Q 036755 60 QAATLIRQACEKWGA---FQV---TNHGIPIKLLNQVEFQTRRLFA 99 (159)
Q Consensus 60 ~~~~~l~~A~~~~GF---F~l---~nHGI~~eli~~~~~~s~~FF~ 99 (159)
+..+++.+.+++.|+ |.. .+|+|+.+.++++.+.-++-|+
T Consensus 200 ~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 200 VLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHHHHHHHHhC
Confidence 567888888998886 333 3699999988887776666554
No 33
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=33.37 E-value=29 Score=27.39 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=36.9
Q ss_pred eeeCCChHHHHHHHHHHHHcCeEEEe-ecCCCHHHHHHHHHHHHH
Q 036755 53 VIDLGSPQAATLIRQACEKWGAFQVT-NHGIPIKLLNQVEFQTRR 96 (159)
Q Consensus 53 vIDls~~~~~~~l~~A~~~~GFF~l~-nHGI~~eli~~~~~~s~~ 96 (159)
+||++.++.+.+....|.+.|-=.|+ ..|.+++..+++.+++++
T Consensus 92 vIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~ 136 (288)
T 3ijp_A 92 ILDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKY 136 (288)
T ss_dssp EEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHTT
T ss_pred EEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhCc
Confidence 68999998888888899999997777 479998888888887764
No 34
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=31.73 E-value=1.3e+02 Score=23.25 Aligned_cols=43 Identities=16% Similarity=0.109 Sum_probs=31.6
Q ss_pred eeCCChHHHHHHHHHHHHcCe--EEEeecCCCHHHHHHHHHHHHH
Q 036755 54 IDLGSPQAATLIRQACEKWGA--FQVTNHGIPIKLLNQVEFQTRR 96 (159)
Q Consensus 54 IDls~~~~~~~l~~A~~~~GF--F~l~nHGI~~eli~~~~~~s~~ 96 (159)
|++..++.+.++.+.|.+.|- ..+..+|++.+..+++.+.+++
T Consensus 69 Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~ 113 (288)
T 1oi7_A 69 IIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKA 113 (288)
T ss_dssp EECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 445566777788888887776 4556789998877788777765
No 35
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=31.03 E-value=46 Score=25.63 Aligned_cols=48 Identities=17% Similarity=0.130 Sum_probs=36.4
Q ss_pred CCCcceeeCCC---hHHHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhh
Q 036755 48 HAAVPVIDLGS---PQAATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLF 98 (159)
Q Consensus 48 ~~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF 98 (159)
.++|.=|||+. .+..++|++|+.++|.+.+.|-.++.+ +..+.+++|=
T Consensus 13 Gaei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 13 GAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp CEEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred eEEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 35677788876 267899999999999999999888764 3344566653
No 36
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=30.32 E-value=64 Score=25.23 Aligned_cols=50 Identities=18% Similarity=0.048 Sum_probs=37.2
Q ss_pred CCCcceeeCCC---hHHHHHHHHHHHHcCeEEEeec-CCCHHHHHHHHHHHHHhhCC
Q 036755 48 HAAVPVIDLGS---PQAATLIRQACEKWGAFQVTNH-GIPIKLLNQVEFQTRRLFAL 100 (159)
Q Consensus 48 ~~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nH-GI~~eli~~~~~~s~~FF~L 100 (159)
..+|.-|||+. .+..++|++|+.++|.+.+.|- .++.+ +..+.+++|=.+
T Consensus 19 Gaei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 35677788874 3678999999999999999998 78765 334566665433
No 37
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=29.90 E-value=63 Score=19.00 Aligned_cols=33 Identities=18% Similarity=0.381 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHH
Q 036755 61 AATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRR 96 (159)
Q Consensus 61 ~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~ 96 (159)
.+.+|.+.|+..| +.-.|--.++++++.+....
T Consensus 14 kV~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~~ 46 (55)
T 2do1_A 14 KLAELKQECLARG---LETKGIKQDLIHRLQAYLEE 46 (55)
T ss_dssp CHHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHhc
Confidence 3667899999999 45677778888888765443
No 38
>2nrk_A Hypothetical protein GRPB; UPF0157, PFAM04229, glutamate-rich protein, enterococcus FAE PSI-2, protein structure initiative; 1.65A {Enterococcus faecalis} SCOP: d.218.1.14
Probab=29.80 E-value=15 Score=26.75 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=23.6
Q ss_pred CCcceeeCC----ChHHHHHHHHHHHHcCeEEEeecCCC
Q 036755 49 AAVPVIDLG----SPQAATLIRQACEKWGAFQVTNHGIP 83 (159)
Q Consensus 49 ~~iPvIDls----~~~~~~~l~~A~~~~GFF~l~nHGI~ 83 (159)
..=||||+. +.+.+..+.++++..||-+.-+.|++
T Consensus 49 ~AKPIIDI~v~V~~~~~~~~~~~~L~~~Gy~~~~e~~~~ 87 (173)
T 2nrk_A 49 AAKPIIDFLVIVEEIEKVDLLQWEFERIGYEYMGEFGLS 87 (173)
T ss_dssp CBCSCEEEEEEESCSGGGGGGHHHHHHTTCEECTTTTST
T ss_pred CcCCeeEEEeccCCHHHHHHHHHHHHHCCCEECCCCCCC
Confidence 356788874 33445567778889999876654554
No 39
>2ivy_A Hypothetical protein SSO1404; structural genomics, unknown function, CAS, RNAI, crispr; 1.4A {Sulfolobus solfataricus} SCOP: d.58.58.1 PDB: 2i8e_A
Probab=29.15 E-value=1.2e+02 Score=19.76 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=34.5
Q ss_pred eeeCCChHHHHHHHHHHHHcCeEEEeec----CCCHHHHHHHHHHHHHhh
Q 036755 53 VIDLGSPQAATLIRQACEKWGAFQVTNH----GIPIKLLNQVEFQTRRLF 98 (159)
Q Consensus 53 vIDls~~~~~~~l~~A~~~~GFF~l~nH----GI~~eli~~~~~~s~~FF 98 (159)
+-|++......++++.|+++||..|-+- -++.....++....++.-
T Consensus 8 ~YDI~~~kr~~kv~k~L~~yGl~rvQ~SVFe~~lt~~~~~~l~~~L~~~i 57 (101)
T 2ivy_A 8 FYDITDDNLRNRVAEFLKKKGLDRIQYSVFMGDLNSSRLKDVEAGLKIIG 57 (101)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCEEEETTEEEEEECHHHHHHHHHHHHHHT
T ss_pred EEeCCChHHHHHHHHHHHHhCChhccccEEEEEcCHHHHHHHHHHHHHHh
Confidence 3467666788999999999998777653 257777777777777765
No 40
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=28.83 E-value=75 Score=24.03 Aligned_cols=36 Identities=8% Similarity=0.034 Sum_probs=29.6
Q ss_pred HHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhC
Q 036755 63 TLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFA 99 (159)
Q Consensus 63 ~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~ 99 (159)
++.++.+++.||+.|.|- ++.+.++++.+...+..+
T Consensus 6 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 41 (291)
T 2opw_A 6 PSQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVA 41 (291)
T ss_dssp HHHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHh
Confidence 456788999999988764 788999999998888764
No 41
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=28.61 E-value=1.3e+02 Score=21.45 Aligned_cols=37 Identities=16% Similarity=0.331 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHcC-eEEEee-cCCCHHHHHHHHHHHHH
Q 036755 60 QAATLIRQACEKWG-AFQVTN-HGIPIKLLNQVEFQTRR 96 (159)
Q Consensus 60 ~~~~~l~~A~~~~G-FF~l~n-HGI~~eli~~~~~~s~~ 96 (159)
+.+++|.+.++++. .++|++ +|++.+.+.++....++
T Consensus 8 ~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 8 ELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46778888888888 666665 58888877777776654
No 42
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=27.92 E-value=65 Score=20.73 Aligned_cols=48 Identities=8% Similarity=0.144 Sum_probs=31.4
Q ss_pred cceeeCCChHHHHHHHHHHHHcCeEEEeec----CCCHHHHHHHHHHHHHhh
Q 036755 51 VPVIDLGSPQAATLIRQACEKWGAFQVTNH----GIPIKLLNQVEFQTRRLF 98 (159)
Q Consensus 51 iPvIDls~~~~~~~l~~A~~~~GFF~l~nH----GI~~eli~~~~~~s~~FF 98 (159)
|=+-|++...-..++.+.|+++||..|-+. -+++....++.....+.-
T Consensus 7 lV~YDI~~~krr~kv~k~l~~yGl~rvQ~SVFe~~lt~~~~~~L~~~L~~~i 58 (91)
T 3exc_X 7 LVVYDVSDDSKRNKLANNLKKLGLERIQRSAFEGDMDSQRMKDLVRVVKLIV 58 (91)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTTCEEEETTEEEEECC--CHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHhCCccceeeEEEEECCHHHHHHHHHHHHHhc
Confidence 334577766667899999999998766553 256665666665555544
No 43
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=27.73 E-value=84 Score=24.39 Aligned_cols=43 Identities=23% Similarity=0.185 Sum_probs=30.1
Q ss_pred eeeCCCh---HHHHHHHHHHHHcCe---EEEeecCCCHHHHHHHHHHHH
Q 036755 53 VIDLGSP---QAATLIRQACEKWGA---FQVTNHGIPIKLLNQVEFQTR 95 (159)
Q Consensus 53 vIDls~~---~~~~~l~~A~~~~GF---F~l~nHGI~~eli~~~~~~s~ 95 (159)
+|.++.. +.+.++.+.+.++|| +.|.+||=....++.+.+..+
T Consensus 96 Tisl~~~t~~~~l~di~~sl~~~G~~~iv~vNgHGGN~~~l~~a~~el~ 144 (267)
T 3no4_A 96 TISLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAAFSETY 144 (267)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHTCCEEEEEECCTTHHHHHHHHHHHHH
T ss_pred eEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCcCcHHHHHHHHHHHH
Confidence 4566542 578888899999998 555669977766766655443
No 44
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=27.23 E-value=1.6e+02 Score=22.88 Aligned_cols=43 Identities=19% Similarity=0.093 Sum_probs=31.2
Q ss_pred eeCCChHHHHHHHHHHHHcCe--EEEeecCCCHHHHHHHHHHHHH
Q 036755 54 IDLGSPQAATLIRQACEKWGA--FQVTNHGIPIKLLNQVEFQTRR 96 (159)
Q Consensus 54 IDls~~~~~~~l~~A~~~~GF--F~l~nHGI~~eli~~~~~~s~~ 96 (159)
|++..++.+.++.+.|.+.|- +.+...|++++..+++.+.+++
T Consensus 76 Ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~ 120 (297)
T 2yv2_A 76 IVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQ 120 (297)
T ss_dssp EECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 445566777777777777776 4455789998877788887765
No 45
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=26.98 E-value=1.2e+02 Score=21.69 Aligned_cols=37 Identities=11% Similarity=0.155 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHcCeEEEeec-CCCHHHHHHHHHHHHH
Q 036755 60 QAATLIRQACEKWGAFQVTNH-GIPIKLLNQVEFQTRR 96 (159)
Q Consensus 60 ~~~~~l~~A~~~~GFF~l~nH-GI~~eli~~~~~~s~~ 96 (159)
+.+++|.+.++++..++|+++ |++...+.++....++
T Consensus 10 ~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 10 LIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 467788888888888877764 8888888887777664
No 46
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=26.31 E-value=70 Score=24.53 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=29.0
Q ss_pred HHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHhhC
Q 036755 64 LIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRLFA 99 (159)
Q Consensus 64 ~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~FF~ 99 (159)
+.++.+++.||+.|.|- ++.+.++++.+...+.++
T Consensus 26 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 60 (308)
T 2a1x_A 26 EQRKFYEENGFLVIKNL-VPDADIQRFRNEFEKICR 60 (308)
T ss_dssp THHHHHHHHSEEEETTC-SCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEccCC-CCHHHHHHHHHHHHHHHh
Confidence 45678999999988764 789999999999888775
No 47
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=26.20 E-value=1.8e+02 Score=22.43 Aligned_cols=42 Identities=12% Similarity=-0.060 Sum_probs=30.8
Q ss_pred eCCChHHHHHHHHHHHHcCe--EEEeecCCCHHHHHHHHHHHHH
Q 036755 55 DLGSPQAATLIRQACEKWGA--FQVTNHGIPIKLLNQVEFQTRR 96 (159)
Q Consensus 55 Dls~~~~~~~l~~A~~~~GF--F~l~nHGI~~eli~~~~~~s~~ 96 (159)
++..++.+.++.+.|.+.|- +.+...|++.+..+++.+.+++
T Consensus 76 i~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~ 119 (294)
T 2yv1_A 76 IFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAED 119 (294)
T ss_dssp ECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred EccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 34456777777777887786 3455779998878888887775
No 48
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=25.44 E-value=24 Score=26.55 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=23.9
Q ss_pred cceeeCCCh--HHHHHHHHHHHHc-CeEEEeecCC
Q 036755 51 VPVIDLGSP--QAATLIRQACEKW-GAFQVTNHGI 82 (159)
Q Consensus 51 iPvIDls~~--~~~~~l~~A~~~~-GFF~l~nHGI 82 (159)
+|++++..+ ++++.+.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGFTLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSHHHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 888887543 6777888888754 5677999995
No 49
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=23.18 E-value=1.7e+02 Score=22.57 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCeEEEeecCCCHHHHHHHHHHHHHh
Q 036755 61 AATLIRQACEKWGAFQVTNHGIPIKLLNQVEFQTRRL 97 (159)
Q Consensus 61 ~~~~l~~A~~~~GFF~l~nHGI~~eli~~~~~~s~~F 97 (159)
..+++.+.+++.|.-.++.-|++.+...++.++++++
T Consensus 18 d~~~vl~~a~~~gV~~~v~~g~~~~~~~~~~~la~~~ 54 (287)
T 3rcm_A 18 QQAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQL 54 (287)
T ss_dssp CHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHhC
Confidence 3567888889999999999999999889999888875
No 50
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=20.31 E-value=2.6e+02 Score=21.41 Aligned_cols=41 Identities=12% Similarity=0.018 Sum_probs=29.4
Q ss_pred CCChHHHHHHHHHHHHcCe--EEEeecCCCHHHHHHHHHHHHH
Q 036755 56 LGSPQAATLIRQACEKWGA--FQVTNHGIPIKLLNQVEFQTRR 96 (159)
Q Consensus 56 ls~~~~~~~l~~A~~~~GF--F~l~nHGI~~eli~~~~~~s~~ 96 (159)
+...+.+.++.+.|.+.|- +.+...|++.+..+++.+.+++
T Consensus 71 ~tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~ 113 (288)
T 2nu8_A 71 YVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDE 113 (288)
T ss_dssp CCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 3445677777777777775 4556789998877788887775
No 51
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=20.17 E-value=1.9e+02 Score=21.47 Aligned_cols=35 Identities=9% Similarity=0.193 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHcCeEEEee-cCCCHHHHHHHHHHHH
Q 036755 61 AATLIRQACEKWGAFQVTN-HGIPIKLLNQVEFQTR 95 (159)
Q Consensus 61 ~~~~l~~A~~~~GFF~l~n-HGI~~eli~~~~~~s~ 95 (159)
.+++|.+.+.++..++|++ +|++...++++....+
T Consensus 8 ~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 8 EVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 4566777777776665555 5677766666666655
Done!